Query 010571
Match_columns 507
No_of_seqs 300 out of 2728
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 09:40:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 2.4E-45 8.2E-50 355.6 29.2 289 22-346 9-301 (308)
2 3ii7_A Kelch-like protein 7; p 100.0 6.6E-44 2.3E-48 345.2 35.6 267 3-303 24-293 (306)
3 2xn4_A Kelch-like protein 2; s 100.0 1.2E-43 4.2E-48 342.6 36.5 265 3-301 30-296 (302)
4 1zgk_A Kelch-like ECH-associat 100.0 1.1E-43 3.9E-48 343.8 33.9 264 3-301 39-306 (308)
5 2vpj_A Kelch-like protein 12; 100.0 7.1E-43 2.4E-47 337.1 35.2 264 3-301 31-297 (301)
6 3ii7_A Kelch-like protein 7; p 100.0 3.2E-43 1.1E-47 340.4 32.1 273 37-348 11-288 (306)
7 4asc_A Kelch repeat and BTB do 100.0 1E-43 3.6E-48 345.2 27.5 276 3-316 13-305 (315)
8 2xn4_A Kelch-like protein 2; s 100.0 2.2E-42 7.4E-47 333.9 32.9 277 33-346 11-291 (302)
9 2vpj_A Kelch-like protein 12; 100.0 1.3E-42 4.5E-47 335.2 31.2 275 36-346 13-292 (301)
10 2woz_A Kelch repeat and BTB do 100.0 1.4E-42 4.6E-47 337.8 29.4 275 3-315 24-314 (318)
11 4asc_A Kelch repeat and BTB do 100.0 1.4E-41 4.8E-46 330.2 26.4 262 37-338 4-283 (315)
12 2uvk_A YJHT; unknown function, 100.0 1.2E-40 4E-45 329.6 29.1 284 23-341 5-351 (357)
13 2woz_A Kelch repeat and BTB do 100.0 2.5E-40 8.6E-45 321.8 29.3 276 25-345 6-298 (318)
14 2uvk_A YJHT; unknown function, 100.0 1.1E-38 3.9E-43 315.3 27.5 260 3-288 31-352 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 2.3E-38 7.8E-43 337.9 29.2 284 23-332 384-694 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 6.3E-35 2.2E-39 311.4 26.5 254 3-278 412-694 (695)
17 1k3i_A Galactose oxidase precu 100.0 1.7E-33 5.8E-38 300.1 20.0 305 4-346 167-511 (656)
18 1k3i_A Galactose oxidase precu 100.0 1E-32 3.5E-37 294.1 21.1 296 4-330 220-547 (656)
19 3dsm_A Uncharacterized protein 98.7 6.9E-05 2.4E-09 71.9 31.0 272 3-331 17-301 (328)
20 3mbr_X Glutamine cyclotransfer 98.3 0.00042 1.4E-08 62.6 24.5 209 88-331 18-234 (243)
21 3dsm_A Uncharacterized protein 98.2 0.0038 1.3E-07 59.6 31.8 234 52-336 16-257 (328)
22 3mbr_X Glutamine cyclotransfer 98.2 0.0007 2.4E-08 61.1 24.2 163 28-233 21-184 (243)
23 3nol_A Glutamine cyclotransfer 98.0 0.0028 9.6E-08 57.7 22.7 204 92-330 44-254 (262)
24 3nol_A Glutamine cyclotransfer 97.9 0.0015 5.2E-08 59.5 20.3 161 30-233 45-206 (262)
25 2ovr_B FBW7, F-BOX/WD repeat p 97.9 0.029 9.8E-07 55.7 33.3 198 96-332 244-442 (445)
26 3bws_A Protein LP49; two-domai 97.8 0.0018 6E-08 64.2 21.1 269 4-333 102-391 (433)
27 2iwa_A Glutamine cyclotransfer 97.8 0.013 4.4E-07 53.8 25.0 206 94-333 24-238 (266)
28 3nok_A Glutaminyl cyclase; bet 97.8 0.0022 7.6E-08 58.4 19.3 158 30-233 57-215 (268)
29 3vgz_A Uncharacterized protein 97.8 0.021 7E-07 54.4 27.5 231 4-283 70-308 (353)
30 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.032 1.1E-06 54.0 33.7 217 4-283 64-303 (376)
31 1l0q_A Surface layer protein; 97.7 0.0086 2.9E-07 58.2 24.1 256 2-333 11-276 (391)
32 2iwa_A Glutamine cyclotransfer 97.7 0.028 9.6E-07 51.6 26.4 202 30-278 23-237 (266)
33 4ery_A WD repeat-containing pr 97.6 0.045 1.5E-06 51.2 27.1 190 37-280 76-270 (312)
34 2z3z_A Dipeptidyl aminopeptida 97.6 0.037 1.3E-06 58.6 27.8 196 116-334 234-437 (706)
35 3bws_A Protein LP49; two-domai 97.5 0.032 1.1E-06 54.9 25.4 266 4-331 145-431 (433)
36 3v9f_A Two-component system se 97.5 0.0078 2.7E-07 64.9 21.0 224 3-278 427-656 (781)
37 3u4y_A Uncharacterized protein 97.4 0.017 5.9E-07 54.5 21.1 267 3-333 20-305 (331)
38 1l0q_A Surface layer protein; 97.4 0.027 9.1E-07 54.6 22.6 225 38-333 2-234 (391)
39 4aez_A CDC20, WD repeat-contai 97.4 0.081 2.8E-06 51.6 26.0 263 3-334 113-382 (401)
40 4a2l_A BT_4663, two-component 97.4 0.059 2E-06 58.1 27.0 269 3-332 377-659 (795)
41 2hqs_A Protein TOLB; TOLB, PAL 97.4 0.059 2E-06 53.1 24.9 242 37-334 143-389 (415)
42 2ojh_A Uncharacterized protein 97.3 0.0069 2.4E-07 55.8 16.6 233 2-286 21-266 (297)
43 3v9f_A Two-component system se 97.3 0.023 7.8E-07 61.2 22.8 269 2-332 382-656 (781)
44 1gxr_A ESG1, transducin-like e 97.3 0.094 3.2E-06 49.1 24.7 187 37-282 108-300 (337)
45 1nir_A Nitrite reductase; hemo 97.3 0.029 9.8E-07 57.6 22.3 272 5-334 161-460 (543)
46 3nok_A Glutaminyl cyclase; bet 97.3 0.013 4.4E-07 53.4 17.3 201 92-330 56-264 (268)
47 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.13 4.5E-06 49.6 34.2 212 3-283 113-344 (376)
48 1ri6_A Putative isomerase YBHE 97.3 0.061 2.1E-06 50.6 22.6 277 3-336 15-314 (343)
49 4a2l_A BT_4663, two-component 97.2 0.21 7.3E-06 53.7 29.0 256 3-313 107-372 (795)
50 1p22_A F-BOX/WD-repeat protein 97.2 0.13 4.5E-06 50.7 25.4 186 36-279 181-366 (435)
51 2z2n_A Virginiamycin B lyase; 97.2 0.13 4.5E-06 47.3 27.3 255 4-333 37-296 (299)
52 4ery_A WD repeat-containing pr 97.2 0.13 4.5E-06 47.9 24.1 230 37-333 34-269 (312)
53 1p22_A F-BOX/WD-repeat protein 97.1 0.13 4.4E-06 50.7 24.3 224 36-331 141-364 (435)
54 2hqs_A Protein TOLB; TOLB, PAL 97.1 0.023 7.8E-07 56.1 18.6 228 4-286 160-395 (415)
55 3hfq_A Uncharacterized protein 97.1 0.087 3E-06 50.1 22.1 235 54-331 19-270 (347)
56 1k8k_C P40, ARP2/3 complex 41 97.1 0.087 3E-06 50.3 21.9 150 37-227 19-172 (372)
57 3hfq_A Uncharacterized protein 97.1 0.055 1.9E-06 51.4 20.1 278 5-334 20-321 (347)
58 3jrp_A Fusion protein of prote 97.0 0.11 3.7E-06 49.7 22.1 191 37-279 22-241 (379)
59 4aez_A CDC20, WD repeat-contai 97.0 0.17 5.6E-06 49.3 23.6 218 53-332 113-336 (401)
60 1k8k_C P40, ARP2/3 complex 41 97.0 0.25 8.4E-06 47.0 26.6 229 3-287 30-285 (372)
61 1gxr_A ESG1, transducin-like e 97.0 0.2 6.9E-06 46.8 23.4 186 100-333 108-297 (337)
62 3scy_A Hypothetical bacterial 97.0 0.26 9E-06 46.9 28.1 279 5-334 31-341 (361)
63 1yiq_A Quinohemoprotein alcoho 97.0 0.49 1.7E-05 50.0 28.6 132 31-184 64-201 (689)
64 2ojh_A Uncharacterized protein 96.9 0.13 4.4E-06 47.0 20.7 229 52-335 21-261 (297)
65 1r5m_A SIR4-interacting protei 96.9 0.12 4.1E-06 50.2 21.3 144 101-280 217-363 (425)
66 3c5m_A Oligogalacturonate lyas 96.9 0.27 9.4E-06 47.2 23.7 205 116-337 167-389 (396)
67 1kb0_A Quinohemoprotein alcoho 96.9 0.2 6.7E-06 52.9 24.0 129 31-184 71-208 (677)
68 1qks_A Cytochrome CD1 nitrite 96.9 0.098 3.3E-06 53.8 21.1 272 3-333 177-478 (567)
69 3vgz_A Uncharacterized protein 96.9 0.31 1.1E-05 45.9 29.6 239 37-333 52-304 (353)
70 3jrp_A Fusion protein of prote 96.9 0.087 3E-06 50.3 19.6 200 38-287 69-297 (379)
71 1pby_B Quinohemoprotein amine 96.8 0.16 5.5E-06 47.5 21.2 270 2-333 10-311 (337)
72 3u4y_A Uncharacterized protein 96.8 0.28 9.4E-06 46.0 22.7 235 37-335 9-255 (331)
73 3v7d_B Cell division control p 96.8 0.45 1.5E-05 47.1 28.9 145 151-334 279-423 (464)
74 3pe7_A Oligogalacturonate lyas 96.7 0.36 1.2E-05 46.3 23.1 211 116-335 167-387 (388)
75 2qc5_A Streptogramin B lactona 96.7 0.35 1.2E-05 44.3 26.2 252 4-331 42-299 (300)
76 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.53 1.8E-05 46.4 31.1 225 38-334 169-393 (445)
77 1jmx_B Amine dehydrogenase; ox 96.7 0.3 1E-05 45.9 21.8 160 37-233 10-180 (349)
78 1got_B GT-beta; complex (GTP-b 96.7 0.39 1.3E-05 45.4 22.5 228 37-332 66-301 (340)
79 2ecf_A Dipeptidyl peptidase IV 96.7 0.14 4.9E-06 54.3 21.3 146 169-330 264-413 (741)
80 3scy_A Hypothetical bacterial 96.6 0.49 1.7E-05 45.0 24.1 111 40-177 15-129 (361)
81 2z2n_A Virginiamycin B lyase; 96.6 0.42 1.4E-05 43.8 22.5 213 5-279 80-296 (299)
82 3jro_A Fusion protein of prote 96.6 0.085 2.9E-06 56.5 18.6 192 37-279 20-239 (753)
83 1pjx_A Dfpase, DIISOPROPYLFLUO 96.5 0.51 1.7E-05 43.7 24.4 246 37-333 28-300 (314)
84 2ad6_A Methanol dehydrogenase 96.5 0.57 2E-05 48.2 23.5 131 31-184 56-194 (571)
85 4gga_A P55CDC, cell division c 96.5 0.18 6.1E-06 49.5 19.0 261 2-331 124-394 (420)
86 2xdw_A Prolyl endopeptidase; a 96.4 0.87 3E-05 48.1 25.5 252 37-334 135-416 (710)
87 3e5z_A Putative gluconolactona 96.4 0.55 1.9E-05 43.2 24.6 242 30-335 30-289 (296)
88 4gga_A P55CDC, cell division c 96.4 0.78 2.7E-05 44.8 25.3 223 53-333 125-354 (420)
89 1kv9_A Type II quinohemoprotei 96.4 0.92 3.2E-05 47.6 25.1 132 30-184 59-196 (668)
90 3ow8_A WD repeat-containing pr 96.4 0.65 2.2E-05 43.6 24.6 186 100-332 91-279 (321)
91 1pjx_A Dfpase, DIISOPROPYLFLUO 96.4 0.12 4.2E-06 48.0 16.5 229 3-279 46-300 (314)
92 3fm0_A Protein CIAO1; WDR39,SG 96.3 0.089 3E-06 50.2 15.6 185 100-319 27-216 (345)
93 4aow_A Guanine nucleotide-bind 96.3 0.6 2.1E-05 43.6 21.3 236 37-332 97-337 (340)
94 3zwl_B Eukaryotic translation 96.3 0.58 2E-05 44.1 21.1 197 37-283 43-254 (369)
95 3dwl_C Actin-related protein 2 96.3 0.14 4.8E-06 49.1 16.7 151 37-229 22-178 (377)
96 1got_B GT-beta; complex (GTP-b 96.3 0.81 2.8E-05 43.2 25.0 166 118-319 165-334 (340)
97 3mkq_A Coatomer beta'-subunit; 96.2 0.39 1.3E-05 51.4 21.6 187 37-280 66-261 (814)
98 3vl1_A 26S proteasome regulato 96.2 1 3.5E-05 43.6 27.3 105 151-278 258-365 (420)
99 4gqb_B Methylosome protein 50; 96.1 0.54 1.8E-05 44.8 19.9 184 100-331 138-330 (344)
100 1vyh_C Platelet-activating fac 96.1 0.71 2.4E-05 45.0 21.1 148 37-233 119-270 (410)
101 1ri6_A Putative isomerase YBHE 96.1 0.89 3.1E-05 42.4 21.0 184 118-331 61-261 (343)
102 2pbi_B Guanine nucleotide-bind 96.1 1.1 3.6E-05 42.7 22.9 166 118-319 177-348 (354)
103 2z3z_A Dipeptidyl aminopeptida 96.0 0.82 2.8E-05 48.1 22.6 156 167-334 234-393 (706)
104 2dfs_A Myosin-5A; myosin-V, in 96.0 0.039 1.3E-06 60.9 12.0 17 466-482 1027-1043(1080)
105 3dwl_C Actin-related protein 2 96.0 0.51 1.7E-05 45.1 19.1 137 3-178 33-178 (377)
106 3mkq_A Coatomer beta'-subunit; 96.0 0.52 1.8E-05 50.5 21.0 189 37-280 24-219 (814)
107 1vyh_C Platelet-activating fac 96.0 0.61 2.1E-05 45.5 19.7 66 100-182 203-270 (410)
108 3fm0_A Protein CIAO1; WDR39,SG 95.9 0.56 1.9E-05 44.5 19.0 139 37-213 72-215 (345)
109 3zwl_B Eukaryotic translation 95.9 1.1 3.8E-05 42.1 24.6 149 151-332 186-346 (369)
110 3i2n_A WD repeat-containing pr 95.9 0.25 8.4E-06 46.7 16.2 106 100-228 128-243 (357)
111 1r5m_A SIR4-interacting protei 95.9 1.3 4.6E-05 42.5 22.9 190 100-331 160-360 (425)
112 3g4e_A Regucalcin; six bladed 95.9 0.29 9.8E-06 45.5 16.2 212 4-262 36-262 (297)
113 3e5z_A Putative gluconolactona 95.8 1.1 3.8E-05 41.2 20.8 220 3-280 50-288 (296)
114 2v71_A Nuclear distribution pr 95.8 0.18 6.1E-06 42.8 12.7 22 466-487 134-155 (189)
115 3oja_B Anopheles plasmodium-re 95.8 0.039 1.3E-06 57.3 10.8 7 56-62 78-84 (597)
116 3azo_A Aminopeptidase; POP fam 95.8 0.57 2E-05 48.9 19.9 151 116-285 216-376 (662)
117 1rwi_B Serine/threonine-protei 95.7 1.1 3.7E-05 40.4 22.0 231 31-332 27-264 (270)
118 1pby_B Quinohemoprotein amine 95.7 1.3 4.3E-05 41.2 21.0 147 53-233 11-168 (337)
119 3vl1_A 26S proteasome regulato 95.7 1.6 5.4E-05 42.2 24.0 191 100-333 108-323 (420)
120 3ow8_A WD repeat-containing pr 95.7 1.3 4.5E-05 41.4 27.8 183 100-330 133-319 (321)
121 1q7f_A NHL, brain tumor CG1071 95.7 1.2 4E-05 40.7 27.7 233 37-331 40-279 (286)
122 4a11_B DNA excision repair pro 95.7 1.5 5.1E-05 41.9 21.7 237 37-333 111-366 (408)
123 4g56_B MGC81050 protein; prote 95.7 0.8 2.7E-05 43.7 19.0 184 100-331 150-342 (357)
124 2bkl_A Prolyl endopeptidase; m 95.7 1.1 3.9E-05 47.1 21.7 213 37-284 131-357 (695)
125 3u1c_A Tropomyosin alpha-1 cha 95.7 0.17 5.8E-06 38.5 11.0 65 419-483 32-100 (101)
126 2xdw_A Prolyl endopeptidase; a 95.7 0.65 2.2E-05 49.1 19.8 223 35-285 81-330 (710)
127 2ecf_A Dipeptidyl peptidase IV 95.6 2.1 7.2E-05 45.2 23.9 193 117-333 263-460 (741)
128 2pm9_A Protein WEB1, protein t 95.6 1.6 5.5E-05 42.0 21.0 199 101-334 126-339 (416)
129 3odt_A Protein DOA1; ubiquitin 95.5 1.4 4.8E-05 40.3 22.8 148 151-338 154-302 (313)
130 3g4e_A Regucalcin; six bladed 95.5 1.5 5.1E-05 40.5 20.7 232 29-317 14-262 (297)
131 1flg_A Protein (quinoprotein e 95.5 2.6 9E-05 43.3 24.6 126 31-183 62-201 (582)
132 3ei3_B DNA damage-binding prot 95.5 1.8 6.1E-05 41.3 22.7 178 3-230 96-284 (383)
133 3ei3_B DNA damage-binding prot 95.5 1.8 6.1E-05 41.3 21.0 186 102-333 87-283 (383)
134 1sq9_A Antiviral protein SKI8; 95.5 1.9 6.4E-05 41.2 24.6 204 102-333 82-323 (397)
135 2ynn_A Coatomer subunit beta'; 95.4 1.3 4.4E-05 40.9 18.7 230 37-333 24-260 (304)
136 3jro_A Fusion protein of prote 95.3 0.28 9.5E-06 52.4 15.6 108 100-229 20-133 (753)
137 1rwi_B Serine/threonine-protei 95.3 1 3.5E-05 40.5 17.6 211 5-277 48-263 (270)
138 1w6s_A Methanol dehydrogenase 95.3 3 0.0001 42.9 22.7 128 31-184 56-200 (599)
139 2dfs_A Myosin-5A; myosin-V, in 95.3 0.075 2.5E-06 58.6 10.9 13 5-18 13-25 (1080)
140 2fxo_A Myosin heavy chain, car 95.3 0.52 1.8E-05 37.7 13.2 41 449-489 80-124 (129)
141 2dg1_A DRP35, lactonase; beta 95.3 1.2 4.1E-05 41.6 18.4 197 3-234 66-269 (333)
142 4e54_B DNA damage-binding prot 95.2 1.4 5E-05 43.1 19.6 147 100-279 131-283 (435)
143 4e54_B DNA damage-binding prot 95.2 0.96 3.3E-05 44.4 18.1 150 37-230 176-329 (435)
144 2eqb_B RAB guanine nucleotide 95.2 0.21 7.3E-06 37.0 9.5 50 413-462 8-57 (97)
145 2hes_X YDR267CP; beta-propelle 95.2 2.1 7.2E-05 40.1 24.1 196 100-331 118-327 (330)
146 3pe7_A Oligogalacturonate lyas 95.2 1.8 6.2E-05 41.3 19.7 201 53-288 60-283 (388)
147 2ynn_A Coatomer subunit beta'; 95.2 2 6.7E-05 39.7 19.6 188 37-282 66-263 (304)
148 1i84_S Smooth muscle myosin he 95.1 0.047 1.6E-06 61.4 9.0 6 102-107 171-176 (1184)
149 2vdu_B TRNA (guanine-N(7)-)-me 95.1 2.8 9.5E-05 41.2 23.1 112 100-233 160-276 (450)
150 3u1c_A Tropomyosin alpha-1 cha 95.1 0.26 9E-06 37.4 10.3 24 439-462 31-54 (101)
151 2v4h_A NF-kappa-B essential mo 95.1 0.21 7.2E-06 37.7 9.3 34 391-424 26-59 (110)
152 3dm0_A Maltose-binding peripla 95.0 3.7 0.00013 43.0 23.2 189 37-281 441-635 (694)
153 1sq9_A Antiviral protein SKI8; 95.0 2.5 8.7E-05 40.3 23.2 117 151-281 197-325 (397)
154 3v7d_B Cell division control p 95.0 3 0.0001 41.0 30.2 186 98-330 277-463 (464)
155 4aow_A Guanine nucleotide-bind 95.0 2.2 7.5E-05 39.6 19.4 146 101-279 185-338 (340)
156 4g56_B MGC81050 protein; prote 95.0 0.56 1.9E-05 44.8 15.3 200 100-332 53-258 (357)
157 3o0z_A RHO-associated protein 94.9 0.36 1.2E-05 39.9 11.3 74 411-484 49-133 (168)
158 4ggc_A P55CDC, cell division c 94.9 2.2 7.5E-05 39.1 21.7 265 2-330 44-313 (318)
159 1qks_A Cytochrome CD1 nitrite 94.9 3.9 0.00013 41.8 23.3 202 116-334 319-540 (567)
160 2pbi_B Guanine nucleotide-bind 94.9 2.7 9.2E-05 39.8 21.2 135 169-332 177-315 (354)
161 3i2n_A WD repeat-containing pr 94.9 1.2 4.2E-05 41.6 17.3 236 37-332 30-291 (357)
162 3iz6_a 40S ribosomal protein R 94.9 2.9 9.9E-05 40.0 27.4 184 118-332 181-375 (380)
163 1nir_A Nitrite reductase; hemo 94.8 2.6 9.1E-05 42.8 20.6 201 116-334 301-516 (543)
164 1m1j_B Fibrinogen beta chain; 94.8 0.27 9.4E-06 48.1 12.2 98 389-486 93-192 (464)
165 3ott_A Two-component system se 94.8 2.2 7.5E-05 45.4 20.9 109 100-234 482-592 (758)
166 1jmx_B Amine dehydrogenase; ox 94.8 1.4 4.9E-05 41.1 17.6 58 2-67 20-79 (349)
167 3k26_A Polycomb protein EED; W 94.8 1.5 5E-05 41.2 17.7 106 101-229 85-193 (366)
168 3u59_A Tropomyosin beta chain; 94.8 0.36 1.2E-05 36.7 10.5 17 466-482 83-99 (101)
169 2v66_B Nuclear distribution pr 94.7 0.74 2.5E-05 35.2 11.8 67 425-491 36-106 (111)
170 3sfz_A APAF-1, apoptotic pepti 94.7 6.8 0.00023 44.1 25.5 191 37-280 668-873 (1249)
171 2qc5_A Streptogramin B lactona 94.6 2.5 8.6E-05 38.3 26.4 224 37-330 30-258 (300)
172 3oja_A Leucine-rich immune mol 94.5 0.31 1.1E-05 49.1 12.5 13 169-181 145-157 (487)
173 2aq5_A Coronin-1A; WD40 repeat 94.5 1.6 5.5E-05 42.1 17.4 202 100-333 93-300 (402)
174 2dg1_A DRP35, lactonase; beta 94.4 3.1 0.00011 38.6 23.6 250 37-331 55-315 (333)
175 2fxo_A Myosin heavy chain, car 94.4 0.73 2.5E-05 36.8 11.9 16 471-486 99-114 (129)
176 3o0z_A RHO-associated protein 94.4 0.8 2.8E-05 37.8 12.1 67 394-460 11-77 (168)
177 2pm7_B Protein transport prote 94.4 3 0.0001 38.2 20.1 106 37-178 20-133 (297)
178 2vdu_B TRNA (guanine-N(7)-)-me 94.4 4.2 0.00014 39.9 21.3 160 101-282 210-397 (450)
179 2aq5_A Coronin-1A; WD40 repeat 94.4 3.6 0.00012 39.5 19.7 110 102-230 145-256 (402)
180 3fvz_A Peptidyl-glycine alpha- 94.3 3.4 0.00012 38.6 31.4 236 53-331 69-321 (329)
181 3mmy_A MRNA export factor; mRN 94.3 3.4 0.00012 38.6 19.3 191 37-281 97-307 (368)
182 2ad6_A Methanol dehydrogenase 94.3 5.4 0.00019 40.8 23.7 110 3-133 73-194 (571)
183 3azo_A Aminopeptidase; POP fam 94.3 3.7 0.00013 42.5 20.8 156 117-287 102-283 (662)
184 2bkl_A Prolyl endopeptidase; m 94.3 1.5 5.3E-05 46.1 17.8 222 36-285 78-314 (695)
185 1erj_A Transcriptional repress 94.2 3.6 0.00012 39.6 19.2 147 37-229 134-288 (393)
186 2fp8_A Strictosidine synthase; 94.2 3.5 0.00012 38.3 19.3 234 3-278 40-313 (322)
187 3ju4_A Endo-N-acetylneuraminid 94.2 4 0.00014 38.9 20.8 189 5-213 260-482 (670)
188 3bg1_A Protein SEC13 homolog; 94.2 3.1 0.00011 38.6 18.1 111 37-183 24-143 (316)
189 1ic2_A Tropomyosin alpha chain 94.1 0.43 1.5E-05 34.6 9.1 51 415-465 4-54 (81)
190 1yr2_A Prolyl oligopeptidase; 94.1 2.1 7.2E-05 45.4 18.5 224 35-285 116-359 (741)
191 2pm9_A Protein WEB1, protein t 94.1 4.4 0.00015 38.8 19.8 199 100-332 78-294 (416)
192 2ghs_A AGR_C_1268P; regucalcin 93.8 4.3 0.00015 37.9 19.1 186 4-234 72-266 (326)
193 1pgu_A Actin interacting prote 93.8 6.4 0.00022 40.0 23.4 195 100-332 77-283 (615)
194 1erj_A Transcriptional repress 93.8 5 0.00017 38.5 24.8 149 100-279 134-288 (393)
195 3hnw_A Uncharacterized protein 93.6 0.35 1.2E-05 39.0 8.5 67 410-486 68-134 (138)
196 1q7f_A NHL, brain tumor CG1071 93.6 4.1 0.00014 36.8 24.0 218 5-276 53-278 (286)
197 1yiq_A Quinohemoprotein alcoho 93.5 8.5 0.00029 40.3 25.4 110 3-132 80-200 (689)
198 4gqb_B Methylosome protein 50; 93.3 3.1 0.00011 39.3 16.4 153 150-333 91-247 (344)
199 3no2_A Uncharacterized protein 93.3 4.8 0.00016 36.7 23.3 188 37-283 4-202 (276)
200 2v4h_A NF-kappa-B essential mo 93.2 0.83 2.8E-05 34.5 9.3 33 411-443 25-57 (110)
201 1yr2_A Prolyl oligopeptidase; 93.1 10 0.00035 40.1 26.1 192 116-334 242-443 (741)
202 1xfd_A DIP, dipeptidyl aminope 93.0 6 0.00021 41.4 19.8 64 169-234 229-295 (723)
203 3hnw_A Uncharacterized protein 92.9 0.53 1.8E-05 38.0 8.6 56 409-464 74-129 (138)
204 3sfz_A APAF-1, apoptotic pepti 92.9 12 0.00042 42.0 23.2 107 200-333 969-1075(1249)
205 3fvz_A Peptidyl-glycine alpha- 92.8 6.2 0.00021 36.8 31.4 235 4-277 70-321 (329)
206 1yfq_A Cell cycle arrest prote 92.8 5.9 0.0002 36.6 20.5 63 100-177 67-131 (342)
207 3c5m_A Oligogalacturonate lyas 92.8 6.7 0.00023 37.2 24.2 149 167-335 167-332 (396)
208 3iuj_A Prolyl endopeptidase; h 92.7 11 0.00037 39.5 22.5 149 116-287 258-414 (693)
209 3q8t_A Beclin-1; autophagy, AT 92.7 2 6.7E-05 32.2 10.9 33 409-441 17-49 (96)
210 1kb0_A Quinohemoprotein alcoho 92.7 11 0.00038 39.4 27.5 126 94-234 71-207 (677)
211 4a11_B DNA excision repair pro 92.6 2.4 8.2E-05 40.4 15.0 109 151-279 256-366 (408)
212 2ghs_A AGR_C_1268P; regucalcin 92.6 6.5 0.00022 36.6 24.2 147 37-227 60-209 (326)
213 3ott_A Two-component system se 92.6 12 0.00041 39.6 24.6 189 37-285 73-267 (758)
214 2i1j_A Moesin; FERM, coiled-co 92.5 0.083 2.8E-06 54.1 4.2 9 270-278 224-232 (575)
215 1flg_A Protein (quinoprotein e 92.3 11 0.00038 38.5 20.5 108 4-132 79-201 (582)
216 3dr2_A Exported gluconolactona 92.3 6.8 0.00023 36.0 21.0 202 37-285 56-274 (305)
217 2pm7_B Protein transport prote 92.2 6.7 0.00023 35.8 20.6 115 153-287 171-295 (297)
218 1w6s_A Methanol dehydrogenase 92.2 12 0.0004 38.5 21.9 110 3-133 73-200 (599)
219 1k32_A Tricorn protease; prote 91.9 14 0.00047 40.9 21.7 144 118-284 318-467 (1045)
220 2xbg_A YCF48-like protein; pho 91.9 8.1 0.00028 36.1 26.4 218 12-286 65-287 (327)
221 3vkg_A Dynein heavy chain, cyt 91.9 0.74 2.5E-05 56.1 11.7 12 6-17 1252-1263(3245)
222 3dm0_A Maltose-binding peripla 91.9 14 0.00046 38.6 22.2 186 100-333 441-633 (694)
223 3vkg_A Dynein heavy chain, cyt 91.8 0.86 2.9E-05 55.6 12.1 13 56-68 1252-1264(3245)
224 1x79_B RAB GTPase binding effe 91.8 2.4 8.2E-05 32.4 10.4 28 437-464 44-71 (112)
225 2xyi_A Probable histone-bindin 91.8 1.6 5.6E-05 42.6 12.6 149 154-332 196-353 (430)
226 1k32_A Tricorn protease; prote 91.7 18 0.00061 40.0 22.2 103 53-183 358-467 (1045)
227 3no2_A Uncharacterized protein 91.6 7.8 0.00027 35.2 22.6 199 4-260 16-230 (276)
228 2efr_A General control protein 91.6 2.5 8.6E-05 34.6 11.1 42 445-486 70-115 (155)
229 4gkw_A Spindle assembly abnorm 91.5 2.2 7.4E-05 33.0 9.8 67 387-453 16-82 (167)
230 1qhu_A Protein (hemopexin); be 91.5 11 0.00039 37.0 22.5 188 100-331 158-384 (460)
231 2ymu_A WD-40 repeat protein; u 91.4 13 0.00045 37.4 20.2 142 100-280 396-541 (577)
232 3f3f_A Nucleoporin SEH1; struc 91.4 8.5 0.00029 35.2 25.5 63 101-178 71-144 (351)
233 2ece_A 462AA long hypothetical 91.3 12 0.0004 36.8 19.0 181 37-235 95-296 (462)
234 3lrv_A PRE-mRNA-splicing facto 91.3 9.4 0.00032 35.6 24.8 192 37-280 47-246 (343)
235 3odt_A Protein DOA1; ubiquitin 91.2 8.3 0.00029 34.9 21.5 227 36-333 27-256 (313)
236 3iox_A AGI/II, PA; alpha helix 91.2 3.6 0.00012 40.1 13.4 79 411-489 28-107 (497)
237 1wt6_A Myotonin-protein kinase 91.1 0.95 3.3E-05 32.0 6.9 16 433-448 33-48 (81)
238 3b7f_A Glycosyl hydrolase, BNR 90.9 12 0.00039 36.0 24.6 196 3-235 31-269 (394)
239 3oja_A Leucine-rich immune mol 90.9 1.2 4E-05 44.8 10.7 12 119-130 82-93 (487)
240 1ic2_A Tropomyosin alpha chain 90.9 1 3.5E-05 32.5 7.4 44 419-462 22-65 (81)
241 3k26_A Polycomb protein EED; W 90.6 11 0.00036 35.1 24.2 104 38-178 85-193 (366)
242 3mmy_A MRNA export factor; mRN 90.6 11 0.00036 35.0 22.9 143 38-230 54-201 (368)
243 1pgu_A Actin interacting prote 90.6 16 0.00054 37.0 26.7 111 154-282 175-287 (615)
244 2v66_B Nuclear distribution pr 90.5 4.7 0.00016 30.8 11.1 78 388-465 9-90 (111)
245 3tul_A Cell invasion protein S 90.4 2.6 9.1E-05 33.4 9.6 48 440-487 71-125 (158)
246 3mq9_A Bone marrow stromal ant 90.3 2.8 9.5E-05 41.8 12.7 26 462-487 443-468 (471)
247 4h22_A Leucine-rich repeat fli 90.3 1.5 5.2E-05 32.7 7.7 53 411-463 31-83 (103)
248 4gkw_A Spindle assembly abnorm 90.2 5.3 0.00018 30.9 12.2 49 385-433 21-69 (167)
249 3q8t_A Beclin-1; autophagy, AT 90.2 3 0.0001 31.1 9.6 15 470-484 68-82 (96)
250 3frx_A Guanine nucleotide-bind 90.0 12 0.0004 34.6 22.9 145 37-231 76-230 (319)
251 2gop_A Trilobed protease; beta 90.0 12 0.00041 34.7 23.3 100 116-234 151-257 (347)
252 2jee_A YIIU; FTSZ, septum, coi 89.9 2.1 7.2E-05 30.5 7.9 26 415-440 11-36 (81)
253 1yfq_A Cell cycle arrest prote 89.8 12 0.00041 34.4 22.9 194 37-281 67-285 (342)
254 3bg1_A Protein SEC13 homolog; 89.8 8.5 0.00029 35.5 15.1 112 100-233 24-142 (316)
255 3iuj_A Prolyl endopeptidase; h 89.6 22 0.00075 37.1 26.3 251 37-335 139-408 (693)
256 3mq7_A Bone marrow stromal ant 89.5 4.6 0.00016 30.6 9.9 30 447-479 73-102 (121)
257 3lay_A Zinc resistance-associa 89.5 1.3 4.5E-05 37.2 7.9 11 432-442 93-103 (175)
258 3o4h_A Acylamino-acid-releasin 89.4 8.6 0.00029 39.1 16.1 191 37-284 121-320 (582)
259 3bas_A Myosin heavy chain, str 89.2 3 0.0001 30.6 8.9 28 464-491 58-85 (89)
260 3ol1_A Vimentin; structural ge 89.1 4.3 0.00015 31.7 10.2 35 448-482 65-103 (119)
261 2oiz_A Aromatic amine dehydrog 89.1 15 0.00053 34.7 21.5 66 253-333 265-335 (361)
262 3ibp_A Chromosome partition pr 88.9 3.5 0.00012 37.2 10.5 75 409-487 23-101 (302)
263 2hes_X YDR267CP; beta-propelle 88.8 15 0.0005 34.1 23.7 160 34-235 21-191 (330)
264 4ggc_A P55CDC, cell division c 88.8 13 0.00046 33.6 24.9 226 53-333 45-274 (318)
265 3vp9_A General transcriptional 88.7 0.96 3.3E-05 33.2 5.6 41 433-479 45-85 (92)
266 2ocy_A RAB guanine nucleotide 88.6 8.8 0.0003 31.2 12.2 27 417-443 44-70 (154)
267 4h22_A Leucine-rich repeat fli 88.5 3 0.0001 31.1 8.2 55 432-486 24-82 (103)
268 1f5n_A Interferon-induced guan 88.3 2.5 8.6E-05 43.2 10.6 8 481-488 572-579 (592)
269 2jee_A YIIU; FTSZ, septum, coi 88.1 4.2 0.00014 29.0 8.5 16 414-429 24-39 (81)
270 1wt6_A Myotonin-protein kinase 87.9 2.8 9.7E-05 29.6 7.3 10 476-485 59-68 (81)
271 3dr2_A Exported gluconolactona 87.9 7.4 0.00025 35.7 13.1 165 37-234 96-273 (305)
272 3jsv_C NF-kappa-B essential mo 87.6 2.8 9.7E-05 30.7 7.5 27 396-422 9-35 (94)
273 3gre_A Serine/threonine-protei 87.6 21 0.00071 34.4 19.0 110 100-232 181-296 (437)
274 3ju4_A Endo-N-acetylneuraminid 87.6 20 0.00069 34.2 18.9 173 85-262 278-481 (670)
275 1x79_B RAB GTPase binding effe 87.5 6.9 0.00024 29.9 9.9 20 446-465 46-65 (112)
276 3ghg_A Fibrinogen alpha chain; 87.5 3 0.0001 40.7 9.8 38 449-486 114-155 (562)
277 3qh9_A Liprin-beta-2; coiled-c 87.4 1.8 6.1E-05 30.6 6.1 39 410-448 26-64 (81)
278 3tnu_B Keratin, type II cytosk 87.1 2.8 9.4E-05 33.4 8.1 19 466-484 86-104 (129)
279 1qhu_A Protein (hemopexin); be 86.9 14 0.00046 36.5 14.6 188 3-228 167-385 (460)
280 3ghg_B Fibrinogen beta chain; 86.8 3.7 0.00013 39.8 10.1 47 387-433 86-132 (461)
281 3jsv_C NF-kappa-B essential mo 86.7 2.2 7.6E-05 31.2 6.5 15 414-428 6-20 (94)
282 1m1j_B Fibrinogen beta chain; 86.3 7.5 0.00026 38.1 12.1 57 387-443 98-154 (464)
283 3tnu_A Keratin, type I cytoske 86.3 2.4 8.3E-05 33.8 7.4 19 466-484 88-106 (131)
284 3c75_H MADH, methylamine dehyd 86.2 26 0.0009 34.1 20.6 121 37-181 84-213 (426)
285 3cvf_A Homer-3, homer protein 86.1 2.9 9.9E-05 29.7 6.7 27 414-440 10-36 (79)
286 3f3f_A Nucleoporin SEH1; struc 86.1 20 0.00068 32.6 19.1 195 100-331 22-248 (351)
287 3a7p_A Autophagy protein 16; c 86.0 8.4 0.00029 31.1 10.1 34 411-444 76-109 (152)
288 2eqb_B RAB guanine nucleotide 85.9 8.8 0.0003 28.4 11.3 59 390-448 6-64 (97)
289 1go4_E MAD1 (mitotic arrest de 85.9 1.8 6.2E-05 32.3 5.8 32 411-442 13-44 (100)
290 2xbg_A YCF48-like protein; pho 85.6 23 0.00079 32.9 26.3 259 11-339 23-286 (327)
291 3iv1_A Tumor susceptibility ge 85.5 3.4 0.00011 29.2 6.7 10 467-476 58-67 (78)
292 3iz6_a 40S ribosomal protein R 85.4 25 0.00086 33.2 21.7 112 100-228 260-375 (380)
293 1f5n_A Interferon-induced guan 85.4 4.2 0.00015 41.6 10.4 15 470-484 568-582 (592)
294 1kv9_A Type II quinohemoprotei 85.3 38 0.0013 35.2 27.8 125 94-234 60-195 (668)
295 1pex_A Collagenase-3, MMP-13; 85.2 18 0.00061 31.3 16.2 155 33-233 29-197 (207)
296 4h5i_A Guanine nucleotide-exch 85.1 26 0.00087 33.0 23.6 181 53-276 157-341 (365)
297 2ocy_A RAB guanine nucleotide 84.5 15 0.00051 29.9 12.2 10 433-442 81-90 (154)
298 2i1j_A Moesin; FERM, coiled-co 84.4 0.34 1.2E-05 49.5 1.9 9 308-316 253-261 (575)
299 3ni0_A Bone marrow stromal ant 84.1 10 0.00035 27.6 9.6 14 466-479 71-84 (99)
300 2no2_A HIP-I, huntingtin-inter 84.0 9.9 0.00034 28.9 9.4 7 429-435 34-40 (107)
301 1t6f_A Geminin; coiled-coil, c 84.0 2.4 8.3E-05 24.5 4.4 28 461-488 6-33 (37)
302 3cve_A Homer protein homolog 1 83.8 7 0.00024 27.2 7.6 24 417-440 7-30 (72)
303 2e7s_A RAB guanine nucleotide 83.5 6.1 0.00021 31.3 8.2 38 413-450 28-65 (135)
304 2xyi_A Probable histone-bindin 83.5 27 0.00091 33.7 15.3 152 152-332 141-309 (430)
305 1uix_A RHO-associated kinase; 83.4 5.4 0.00019 27.6 6.8 27 418-444 5-31 (71)
306 1z68_A Fibroblast activation p 83.3 4.3 0.00015 42.6 10.0 63 2-65 35-102 (719)
307 1m1j_C Fibrinogen gamma chain; 83.2 5.4 0.00019 38.5 9.5 15 389-403 31-45 (409)
308 3mq7_A Bone marrow stromal ant 83.1 13 0.00046 28.2 11.0 25 464-488 73-97 (121)
309 3cve_A Homer protein homolog 1 82.7 9.9 0.00034 26.4 8.1 22 433-454 9-30 (72)
310 1t3j_A Mitofusin 1; coiled coi 82.7 5.1 0.00017 29.6 7.0 42 447-488 49-90 (96)
311 3sjl_D Methylamine dehydrogena 82.7 35 0.0012 32.7 23.0 70 253-334 291-365 (386)
312 4a5s_A Dipeptidyl peptidase 4 82.6 51 0.0017 34.5 19.1 60 220-280 229-296 (740)
313 3ghg_C Fibrinogen gamma chain; 82.5 7 0.00024 37.6 9.8 41 387-427 29-69 (411)
314 1go4_E MAD1 (mitotic arrest de 82.4 2 6.9E-05 32.1 4.8 9 467-475 80-88 (100)
315 2w83_C C-JUN-amino-terminal ki 82.3 4.6 0.00016 28.1 6.2 27 411-437 31-57 (77)
316 3ol1_A Vimentin; structural ge 82.3 16 0.00053 28.5 11.3 13 436-448 67-79 (119)
317 1itv_A MMP9; adaptive molecula 82.3 23 0.00078 30.3 13.5 154 33-232 12-178 (195)
318 3hxj_A Pyrrolo-quinoline quino 82.2 30 0.001 31.5 17.8 100 99-233 106-210 (330)
319 2p4o_A Hypothetical protein; p 82.2 30 0.001 31.6 23.7 204 24-277 28-241 (306)
320 3cvf_A Homer-3, homer protein 81.8 7.5 0.00026 27.6 7.3 31 426-456 8-38 (79)
321 3lrv_A PRE-mRNA-splicing facto 81.6 33 0.0011 31.7 26.3 106 100-230 138-246 (343)
322 2k48_A Nucleoprotein; viral pr 81.1 4.1 0.00014 30.3 5.9 7 392-398 38-44 (107)
323 2mad_H Methylamine dehydrogena 80.9 39 0.0013 32.1 29.1 70 253-335 278-353 (373)
324 1xfd_A DIP, dipeptidyl aminope 80.8 30 0.001 35.9 15.5 108 118-235 38-150 (723)
325 1su3_A Interstitial collagenas 80.5 33 0.0011 33.6 14.4 156 32-233 267-437 (450)
326 2lw1_A ABC transporter ATP-bin 80.4 2.6 8.9E-05 31.0 4.9 10 470-479 64-73 (89)
327 2fp8_A Strictosidine synthase; 79.9 37 0.0012 31.2 15.6 187 4-228 102-313 (322)
328 3c7x_A Matrix metalloproteinas 79.7 28 0.00096 29.7 13.4 106 99-230 60-177 (196)
329 3mq9_A Bone marrow stromal ant 79.3 14 0.00048 36.6 11.6 9 149-157 112-120 (471)
330 1l8d_A DNA double-strand break 79.0 8.1 0.00028 29.7 7.7 18 468-485 84-101 (112)
331 2oto_A M protein; helical coil 78.6 26 0.00088 28.7 12.8 26 413-438 53-78 (155)
332 1deb_A APC protein, adenomatou 78.2 4.1 0.00014 25.6 4.3 41 414-454 7-47 (54)
333 1itv_A MMP9; adaptive molecula 77.7 32 0.0011 29.3 15.6 152 95-280 11-176 (195)
334 2ymu_A WD-40 repeat protein; u 77.7 60 0.002 32.3 24.1 179 100-330 314-496 (577)
335 2k48_A Nucleoprotein; viral pr 77.6 17 0.00059 27.0 8.3 13 466-478 86-98 (107)
336 2e7s_A RAB guanine nucleotide 77.5 8 0.00027 30.6 7.0 12 467-478 101-112 (135)
337 1gmj_A ATPase inhibitor; coile 77.4 8.1 0.00028 27.7 6.3 17 464-480 60-76 (84)
338 4a5s_A Dipeptidyl peptidase 4 77.4 74 0.0025 33.3 22.3 114 169-285 229-360 (740)
339 1deq_A Fibrinogen (alpha chain 77.3 16 0.00056 34.2 10.1 11 391-401 69-79 (390)
340 2zqm_A Prefoldin beta subunit 77.0 23 0.00078 27.2 10.0 21 466-486 88-108 (117)
341 1s1c_X RHO-associated, coiled- 77.0 8.7 0.0003 26.6 6.2 29 415-443 4-32 (71)
342 2oxj_A Hybrid alpha/beta pepti 76.5 3.8 0.00013 23.4 3.5 27 464-490 3-29 (34)
343 1n7d_A LDL receptor, low-densi 76.3 78 0.0027 33.0 18.6 153 99-283 463-619 (699)
344 2q6q_A Spindle POLE BODY compo 76.2 14 0.00048 24.9 6.8 44 446-489 18-65 (74)
345 1nr0_A Actin interacting prote 76.1 71 0.0024 32.4 28.3 107 202-332 458-567 (611)
346 3c7x_A Matrix metalloproteinas 75.9 36 0.0012 29.0 13.1 154 95-280 10-177 (196)
347 3c3f_A Alpha/beta peptide with 75.7 4.1 0.00014 23.2 3.5 27 464-490 3-29 (34)
348 4fi5_A Nucleoprotein; structur 75.6 12 0.0004 28.3 7.0 13 466-478 73-85 (113)
349 1m1j_C Fibrinogen gamma chain; 75.5 13 0.00046 35.8 9.5 13 389-401 38-50 (409)
350 2yy0_A C-MYC-binding protein; 75.4 3.6 0.00012 26.8 3.8 23 438-460 26-48 (53)
351 4dci_A Uncharacterized protein 75.0 19 0.00066 29.1 8.8 21 467-487 82-102 (150)
352 1lwu_C Fibrinogen gamma chain; 74.7 3.4 0.00012 38.5 5.0 12 444-455 39-50 (323)
353 1npe_A Nidogen, entactin; glyc 74.3 46 0.0016 29.4 26.3 198 31-283 39-243 (267)
354 3o4h_A Acylamino-acid-releasin 74.1 76 0.0026 31.8 16.5 98 221-336 134-231 (582)
355 4h5i_A Guanine nucleotide-exch 73.9 59 0.002 30.4 24.7 182 118-331 158-342 (365)
356 1pex_A Collagenase-3, MMP-13; 73.8 43 0.0015 28.8 17.2 153 95-282 28-196 (207)
357 3iv1_A Tumor susceptibility ge 73.7 15 0.00051 26.0 6.8 13 447-459 48-60 (78)
358 3i00_A HIP-I, huntingtin-inter 73.5 4.5 0.00015 31.6 4.6 6 446-451 48-53 (120)
359 2gop_A Trilobed protease; beta 73.2 56 0.0019 29.9 22.7 143 116-284 84-257 (347)
360 3b7f_A Glycosyl hydrolase, BNR 73.2 64 0.0022 30.6 20.5 251 4-285 82-379 (394)
361 1vcs_A Vesicle transport throu 73.2 22 0.00076 26.7 8.4 24 466-489 71-94 (102)
362 3lay_A Zinc resistance-associa 72.5 18 0.00061 30.3 8.4 14 466-479 117-130 (175)
363 4etp_A Kinesin-like protein KA 72.4 5 0.00017 38.9 5.8 29 437-465 16-44 (403)
364 2aze_A Transcription factor DP 71.9 10 0.00036 30.7 6.5 36 436-471 10-45 (155)
365 3hxj_A Pyrrolo-quinoline quino 71.6 59 0.002 29.4 20.5 176 35-282 105-289 (330)
366 2b9c_A Striated-muscle alpha t 71.5 39 0.0013 27.3 11.3 46 420-465 69-114 (147)
367 1kd8_B GABH BLL, GCN4 acid bas 71.4 5.9 0.0002 22.9 3.5 24 465-488 4-27 (36)
368 3m48_A General control protein 71.1 6.3 0.00022 22.4 3.5 26 466-491 4-29 (33)
369 1gk4_A Vimentin; intermediate 70.7 27 0.00092 25.2 8.1 11 466-476 65-75 (84)
370 2oto_A M protein; helical coil 70.6 29 0.001 28.3 9.4 12 436-447 62-73 (155)
371 2ece_A 462AA long hypothetical 70.6 84 0.0029 30.8 23.1 217 100-331 95-351 (462)
372 3iox_A AGI/II, PA; alpha helix 70.4 51 0.0018 32.2 12.0 20 466-485 77-96 (497)
373 3c3g_A Alpha/beta peptide with 69.6 7.1 0.00024 22.1 3.5 25 466-490 4-28 (33)
374 2qyw_A Vesicle transport throu 69.5 33 0.0011 25.7 9.3 20 466-485 82-101 (102)
375 3m91_A Proteasome-associated A 69.4 19 0.00067 23.1 6.1 22 466-487 27-48 (51)
376 2p4o_A Hypothetical protein; p 69.2 67 0.0023 29.1 19.3 188 31-261 75-277 (306)
377 1gd2_E Transcription factor PA 69.1 12 0.0004 26.0 5.4 20 467-486 48-67 (70)
378 2hy6_A General control protein 68.8 6.1 0.00021 22.6 3.1 25 465-489 4-28 (34)
379 2ic6_A Nucleocapsid protein; h 68.7 24 0.00081 24.9 6.9 13 466-478 56-68 (78)
380 1kd8_A GABH AIV, GCN4 acid bas 68.6 5.5 0.00019 23.1 3.0 21 466-486 5-25 (36)
381 2ic9_A Nucleocapsid protein; h 68.4 13 0.00046 27.2 5.8 12 467-478 57-68 (96)
382 4d9s_A UVB-resistance protein 68.1 86 0.003 30.0 14.1 149 29-210 182-354 (406)
383 3v65_B Low-density lipoprotein 67.5 86 0.0029 29.7 24.5 215 4-278 97-318 (386)
384 4fi5_A Nucleoprotein; structur 67.4 36 0.0012 25.7 8.0 17 391-407 24-40 (113)
385 4dci_A Uncharacterized protein 67.2 32 0.0011 27.8 8.5 23 415-437 34-56 (150)
386 2wq1_A General control protein 67.2 8.5 0.00029 21.8 3.5 25 465-489 3-27 (33)
387 1ik9_A DNA repair protein XRCC 67.2 31 0.0011 29.9 9.1 11 419-429 141-151 (213)
388 1gen_A Gelatinase A; hydrolase 67.0 63 0.0022 28.0 15.5 157 32-228 35-202 (218)
389 3qh9_A Liprin-beta-2; coiled-c 66.9 31 0.0011 24.4 8.1 18 469-486 54-71 (81)
390 1npe_A Nidogen, entactin; glyc 66.8 67 0.0023 28.3 23.4 156 31-233 82-243 (267)
391 3hrp_A Uncharacterized protein 66.8 92 0.0031 29.8 33.2 201 37-285 141-361 (409)
392 2bni_A General control protein 66.8 7 0.00024 22.4 3.1 26 465-490 4-29 (34)
393 2oiz_A Aromatic amine dehydrog 66.5 85 0.0029 29.3 20.2 64 203-279 265-335 (361)
394 3m9b_A Proteasome-associated A 66.1 7.1 0.00024 34.5 4.8 21 467-487 73-93 (251)
395 1l8d_A DNA double-strand break 65.6 42 0.0014 25.5 9.7 17 469-485 78-94 (112)
396 3a7p_A Autophagy protein 16; c 65.5 52 0.0018 26.5 9.9 55 411-465 69-123 (152)
397 1hjb_A Ccaat/enhancer binding 65.1 15 0.00051 26.7 5.6 29 466-494 47-75 (87)
398 3hhm_B NISH2 P85alpha; PI3KCA, 65.1 76 0.0026 30.1 12.2 51 433-483 200-254 (373)
399 3s9g_A Protein hexim1; cyclin 64.9 38 0.0013 24.8 7.8 25 462-486 65-89 (104)
400 1uo4_A General control protein 63.5 11 0.00038 21.6 3.5 25 466-490 5-29 (34)
401 2p9w_A MAL S 1 allergenic prot 63.5 96 0.0033 28.9 18.5 145 100-263 147-305 (334)
402 1fxk_A Prefoldin; archaeal pro 63.4 41 0.0014 25.2 8.4 21 467-487 77-97 (107)
403 2wvr_A Geminin; DNA replicatio 62.7 30 0.001 29.1 7.7 11 411-421 116-126 (209)
404 2zqm_A Prefoldin beta subunit 62.5 49 0.0017 25.2 9.6 18 468-485 83-100 (117)
405 1su3_A Interstitial collagenas 61.8 1.2E+02 0.0042 29.6 17.4 153 95-283 267-437 (450)
406 3vu4_A KMHSV2; beta-propeller 61.6 1E+02 0.0035 28.5 19.7 66 151-229 206-272 (355)
407 3gre_A Serine/threonine-protei 61.5 1.1E+02 0.0038 29.0 15.1 152 37-230 181-361 (437)
408 3ghg_C Fibrinogen gamma chain; 61.5 73 0.0025 30.5 11.2 41 387-427 36-76 (411)
409 3trt_A Vimentin; cytoskeleton, 61.2 39 0.0013 23.7 8.1 70 414-489 6-76 (77)
410 3k6s_A Integrin alpha-X; cell 61.0 2E+02 0.0069 31.8 17.5 227 29-274 335-594 (1095)
411 3hrp_A Uncharacterized protein 61.0 1.2E+02 0.004 29.0 27.0 188 5-235 154-361 (409)
412 1nr0_A Actin interacting prote 60.9 1.4E+02 0.0049 30.1 22.2 181 118-333 171-356 (611)
413 4dk0_A Putative MACA; alpha-ha 60.7 11 0.00038 35.8 5.7 19 469-487 129-147 (369)
414 2xzm_R RACK1; ribosome, transl 60.7 1E+02 0.0035 28.2 23.2 232 37-334 38-287 (343)
415 3oyo_A Hemopexin fold protein 60.3 86 0.003 27.3 13.0 106 99-227 69-197 (225)
416 3mov_A Lamin-B1; LMNB1, B-type 60.1 24 0.00081 26.2 6.0 59 430-488 11-70 (95)
417 3swf_A CGMP-gated cation chann 59.8 36 0.0012 23.7 6.4 17 469-485 32-48 (74)
418 3ba0_A Macrophage metalloelast 59.7 1.2E+02 0.004 28.7 13.7 159 95-283 185-355 (365)
419 1m5i_A APC protein; coiled-coi 59.7 56 0.0019 24.9 9.0 8 495-502 118-125 (125)
420 2nrj_A HBL B protein; enteroto 59.3 20 0.0007 33.8 7.1 35 471-506 178-218 (346)
421 3qne_A Seryl-tRNA synthetase, 58.9 14 0.00049 36.4 6.1 17 469-485 85-101 (485)
422 3vu4_A KMHSV2; beta-propeller 58.9 1.1E+02 0.0039 28.2 23.5 66 201-279 204-272 (355)
423 3qhy_B Beta-lactamase inhibito 58.6 1E+02 0.0036 27.7 13.0 57 144-213 190-246 (282)
424 3fpp_A Macrolide-specific effl 58.6 12 0.00041 35.2 5.5 16 471-486 130-145 (341)
425 2r2v_A GCN4 leucine zipper; co 57.9 16 0.00053 21.0 3.5 24 465-488 4-27 (34)
426 2ic6_A Nucleocapsid protein; h 57.4 47 0.0016 23.4 8.3 14 471-484 54-67 (78)
427 4fla_A Regulation of nuclear P 57.3 76 0.0026 25.7 9.9 29 450-478 112-140 (152)
428 3ghg_B Fibrinogen beta chain; 57.2 79 0.0027 30.7 10.6 15 389-403 95-109 (461)
429 2dq3_A Seryl-tRNA synthetase; 56.7 19 0.00065 35.1 6.6 6 395-400 36-41 (425)
430 1t2k_D Cyclic-AMP-dependent tr 56.7 35 0.0012 22.7 6.0 15 440-454 38-52 (61)
431 3u06_A Protein claret segregat 56.5 24 0.00082 34.2 7.1 30 433-462 12-41 (412)
432 3iyk_A VP5; icosahedral virus; 55.8 1.5E+02 0.0052 28.8 12.2 34 432-465 147-180 (526)
433 2lw9_A Unconventionnal myosin- 55.8 20 0.00067 22.4 4.0 14 466-479 10-23 (51)
434 4dyl_A Tyrosine-protein kinase 55.7 70 0.0024 30.8 10.5 37 400-436 306-342 (406)
435 2j5u_A MREC protein; bacterial 55.6 11 0.00038 33.9 4.4 31 448-478 29-59 (255)
436 1gu4_A CAAT/enhancer binding p 55.5 38 0.0013 24.0 6.2 30 464-493 45-74 (78)
437 3c75_H MADH, methylamine dehyd 55.5 1.5E+02 0.0052 28.6 18.1 123 100-232 84-213 (426)
438 3kci_A Probable E3 ubiquitin-p 55.3 1E+02 0.0035 29.3 11.7 19 194-212 274-292 (389)
439 3t97_C Nuclear pore glycoprote 55.1 26 0.00089 23.7 5.0 43 433-475 7-49 (64)
440 3sjl_D Methylamine dehydrogena 55.1 1.5E+02 0.005 28.3 21.7 121 37-181 44-173 (386)
441 1gd2_E Transcription factor PA 54.9 17 0.00057 25.2 4.2 8 439-446 51-58 (70)
442 4fla_A Regulation of nuclear P 54.8 67 0.0023 26.1 8.5 26 446-471 115-140 (152)
443 4efa_G V-type proton ATPase su 54.7 56 0.0019 25.3 7.6 14 466-479 43-56 (119)
444 1ci6_A Transcription factor AT 54.6 20 0.00069 24.2 4.5 44 406-449 19-62 (63)
445 1gen_A Gelatinase A; hydrolase 54.6 1.1E+02 0.0036 26.6 18.0 156 95-280 35-204 (218)
446 3vp9_A General transcriptional 54.1 61 0.0021 23.7 7.5 74 413-486 10-85 (92)
447 1zxa_A CGMP-dependent protein 54.1 24 0.00083 24.1 4.7 40 451-490 14-53 (67)
448 3fpp_A Macrolide-specific effl 54.0 25 0.00084 32.9 6.8 88 399-486 65-152 (341)
449 1jof_A Carboxy-CIS,CIS-muconat 53.7 1.4E+02 0.0047 27.6 19.8 239 55-331 18-290 (365)
450 3fx0_A NF-kappa-B essential mo 53.5 33 0.0011 25.1 5.6 83 412-494 5-87 (96)
451 2zxx_A Geminin; coiled-coil, c 53.3 57 0.0019 23.1 6.9 55 427-481 23-77 (79)
452 1wlq_A Geminin; coiled-coil; 2 53.3 39 0.0013 24.1 5.8 41 451-491 27-67 (83)
453 3v64_C Agrin; beta propeller, 53.3 1.4E+02 0.0049 27.7 25.6 239 2-294 52-291 (349)
454 3swk_A Vimentin; cytoskeleton, 53.1 61 0.0021 23.4 8.4 75 387-461 5-79 (86)
455 3ibp_A Chromosome partition pr 53.1 78 0.0027 28.6 9.2 102 397-499 4-109 (302)
456 1hxn_A Hemopexin, HPX; heme, b 53.0 1.1E+02 0.0039 26.4 10.9 150 32-226 22-195 (219)
457 2xnx_M M protein, M1-BC1; cell 53.0 28 0.00095 27.7 5.6 94 392-485 29-138 (146)
458 2hz6_A Endoplasmic reticulum t 52.9 3.8 0.00013 39.2 0.9 109 30-179 1-113 (369)
459 3swy_A Cyclic nucleotide-gated 52.7 40 0.0014 21.1 6.3 43 442-484 2-45 (46)
460 2zdi_C Prefoldin subunit alpha 52.4 79 0.0027 25.5 8.8 98 402-499 8-149 (151)
461 3u0c_A Invasin IPAB, 62 kDa an 52.4 80 0.0027 25.6 8.2 70 412-481 70-143 (201)
462 3u06_A Protein claret segregat 52.3 21 0.00071 34.6 5.9 55 410-464 3-57 (412)
463 3m9b_A Proteasome-associated A 52.2 19 0.00066 31.8 5.1 63 411-473 25-96 (251)
464 2dq0_A Seryl-tRNA synthetase; 52.1 35 0.0012 33.5 7.7 99 390-488 3-102 (455)
465 1wle_A Seryl-tRNA synthetase; 52.0 1.1E+02 0.0039 30.3 11.3 99 390-488 42-149 (501)
466 3k6s_A Integrin alpha-X; cell 51.6 2.8E+02 0.0097 30.6 16.6 230 92-329 335-595 (1095)
467 2aze_A Transcription factor DP 51.4 35 0.0012 27.6 6.1 47 438-484 5-51 (155)
468 1m1j_A Fibrinogen alpha subuni 51.3 1.8E+02 0.006 28.1 13.2 112 387-498 63-199 (491)
469 1lrz_A FEMA, factor essential 51.3 19 0.00066 35.1 5.7 68 436-505 245-315 (426)
470 2b5u_A Colicin E3; high resolu 51.2 93 0.0032 30.3 9.9 81 392-477 294-374 (551)
471 3vem_A Helicase protein MOM1; 51.2 78 0.0027 24.0 8.4 63 415-483 37-100 (115)
472 3m0c_C LDL receptor, low-densi 51.0 2.5E+02 0.0084 29.7 24.0 228 2-280 403-634 (791)
473 2ic9_A Nucleocapsid protein; h 50.9 70 0.0024 23.4 8.6 70 390-462 6-76 (96)
474 3kci_A Probable E3 ubiquitin-p 50.7 1.6E+02 0.0055 27.8 12.2 150 29-210 168-342 (389)
475 2wt7_A Proto-oncogene protein 50.6 31 0.001 23.2 4.9 44 420-463 19-62 (63)
476 3gp4_A Transcriptional regulat 50.6 84 0.0029 25.1 8.5 68 412-479 62-129 (142)
477 3qhy_B Beta-lactamase inhibito 50.5 1.4E+02 0.0048 26.8 13.2 133 29-210 72-204 (282)
478 2xe4_A Oligopeptidase B; hydro 50.3 1.8E+02 0.0062 30.5 13.5 162 37-234 282-464 (751)
479 3etw_A Adhesin A; antiparallel 50.1 86 0.0029 24.2 9.7 79 412-490 8-96 (119)
480 3fx0_A NF-kappa-B essential mo 50.1 22 0.00074 26.0 4.2 77 421-497 7-83 (96)
481 3ba0_A Macrophage metalloelast 50.0 1.7E+02 0.0058 27.6 17.8 168 32-240 185-362 (365)
482 2w6a_A ARF GTPase-activating p 50.0 51 0.0018 21.6 5.9 47 431-477 13-63 (63)
483 2qag_B Septin-6, protein NEDD5 49.7 3.5 0.00012 40.3 0.0 84 411-494 324-409 (427)
484 3kqg_A Langerin, C-type lectin 49.7 13 0.00046 31.1 3.8 42 449-490 3-44 (182)
485 3sja_C Golgi to ER traffic pro 49.4 37 0.0013 23.0 5.0 45 445-489 6-59 (65)
486 3twe_A Alpha4H; unknown functi 49.3 22 0.00076 18.3 2.9 22 441-462 4-25 (27)
487 4ath_A MITF, microphthalmia-as 49.2 46 0.0016 23.8 5.7 40 447-486 41-80 (83)
488 3ajw_A Flagellar FLIJ protein; 49.1 99 0.0034 24.6 12.5 111 391-501 14-147 (150)
489 1nkp_B MAX protein, MYC proto- 49.1 41 0.0014 24.0 5.8 40 450-489 42-81 (83)
490 3mov_A Lamin-B1; LMNB1, B-type 49.0 78 0.0027 23.3 7.6 77 382-461 12-88 (95)
491 2xzm_R RACK1; ribosome, transl 49.0 1.6E+02 0.0054 26.9 22.6 191 95-330 25-242 (343)
492 2w6b_A RHO guanine nucleotide 48.8 49 0.0017 21.3 5.1 32 450-481 15-46 (56)
493 3frx_A Guanine nucleotide-bind 48.7 1.5E+02 0.0052 26.7 20.5 184 100-332 76-267 (319)
494 1ses_A Seryl-tRNA synthetase; 48.6 40 0.0014 32.7 7.4 69 390-464 29-97 (421)
495 1fzc_C Fibrin; blood coagulati 48.3 13 0.00043 34.6 3.5 50 414-463 1-50 (319)
496 3ljm_A Coil Ser L9C; de novo d 48.1 29 0.00099 18.5 3.4 25 441-465 4-28 (31)
497 4b6x_A AVRRPS4, avirulence pro 47.7 69 0.0024 22.4 6.5 44 442-485 26-78 (90)
498 2b5u_A Colicin E3; high resolu 47.6 93 0.0032 30.3 9.3 75 413-487 294-374 (551)
499 2efl_A Formin-binding protein 47.4 1.6E+02 0.0055 26.5 11.6 101 385-485 105-228 (305)
500 1gu4_A CAAT/enhancer binding p 47.1 70 0.0024 22.6 6.5 75 376-450 2-76 (78)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.4e-45 Score=355.56 Aligned_cols=289 Identities=19% Similarity=0.251 Sum_probs=240.6
Q ss_pred CCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECC
Q 010571 22 GARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGT 101 (507)
Q Consensus 22 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 101 (507)
++.|.+|..|+++.+++.||+|||. +...++++++||+.+++|..++.+ |.+|.+|+++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~ 71 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADL----------------QVPRSGLAGCVVGG 71 (308)
T ss_dssp ------------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCC----------------SSCCBSCEEEEETT
T ss_pred ccCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCC----------------CcccccceEEEECC
Confidence 3568899999999999999999998 566788999999999999998654 45899999999999
Q ss_pred EEEEEcccC---CCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 102 KLLILGGHY---KKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 102 ~iyv~GG~~---~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
+||++||.. ......+++++||+.+++|+.++ ++|.+|..|+++.++++||++||.+... ..+++++||+.++
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA---PMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERD 147 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECC---CCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTT
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECC---CCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCC
Confidence 999999984 22234678999999999999997 8999999999999999999999987543 5789999999999
Q ss_pred cEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEE
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
+|+.+. ++|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+ .++|.+|..|++++++++|||
T Consensus 148 ~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv 220 (308)
T 1zgk_A 148 EWHLVA---PMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI---TAMNTIRSGAGVCVLHNCIYA 220 (308)
T ss_dssp EEEECC---CCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEE
T ss_pred eEeECC---CCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC---CCCCCccccceEEEECCEEEE
Confidence 999997 67889999999988 56799999998777789999999999999997 568899999999999999999
Q ss_pred EeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCC-cCCeEEEEECCCCCCCC
Q 010571 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPR 337 (507)
Q Consensus 259 ~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~v~~~~~~~~~w~~ 337 (507)
+||.+.....+++++||+.+++|+.++.+ |.+|.+++++ +++ +.|||+||.++. ..+++++||+.++.|..
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~----p~~r~~~~~~--~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETETWTFVAPM----KHRRSALGIT--VHQ--GRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEECCCC----SSCCBSCEEE--EET--TEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred EeCCCCCCccceEEEEeCCCCcEEECCCC----CCCccceEEE--EEC--CEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 99988776688999999999999999866 3455555443 444 489999998754 57899999999999999
Q ss_pred CcccCChhh
Q 010571 338 PKIFQSPAA 346 (507)
Q Consensus 338 ~~~~~~~~~ 346 (507)
...++.++.
T Consensus 293 ~~~~p~~r~ 301 (308)
T 1zgk_A 293 VTRMTSGRS 301 (308)
T ss_dssp EEECSSCCB
T ss_pred cCCCCCCcc
Confidence 877776654
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=6.6e-44 Score=345.18 Aligned_cols=267 Identities=15% Similarity=0.194 Sum_probs=239.0
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
+++|+||+.+++|..++ .+|.+|.+|+++++++.||++||.. ....+++++||+.+++|..++.+
T Consensus 24 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~----------- 88 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIR---CPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGP----------- 88 (306)
T ss_dssp TSEEEEETTTTEEEECC---CCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECC-----------
T ss_pred ceEEEecCCCCCEecCC---CCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCC-----------
Confidence 57899999999999998 7899999999999999999999988 66789999999999999998765
Q ss_pred CccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCC
Q 010571 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDR 162 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~ 162 (507)
|.+|.+|++++++++||++||........+++++||+.+++|+.++ ++|.+|.+|+++.++++||++||.+.
T Consensus 89 -----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 89 -----PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp -----SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEES
T ss_pred -----CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCEEEEECCCCC
Confidence 4589999999999999999998755556789999999999999997 89999999999999999999999866
Q ss_pred CCC---ccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCC
Q 010571 163 SRK---LLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 163 ~~~---~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
... ..+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+ ++
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~---~~ 233 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV---SP 233 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEEC---CC
T ss_pred CCCcccccceEEEeCCCCCeEEECC---CccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC---CC
Confidence 543 3889999999999999997 68889999999998 55699999998777789999999999999997 57
Q ss_pred CCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEE
Q 010571 240 LVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSA 303 (507)
Q Consensus 240 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~ 303 (507)
+|.+|..|++++++++|||+||.++....+++++||+.+++|+.++.++ .++.+++++.+
T Consensus 234 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~----~~r~~~~~~~~ 293 (306)
T 3ii7_A 234 MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR----AFPVTSCLICV 293 (306)
T ss_dssp CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE----CCSCTTCEEEE
T ss_pred CCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc----cccceeEEEEE
Confidence 8999999999999999999999887777889999999999999998774 45666665543
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=342.62 Aligned_cols=265 Identities=19% Similarity=0.273 Sum_probs=235.6
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
+++|+||+.++.|..++ .+|.+|.+|+++++++.||++||..+....+++++||+.+++|..++.++
T Consensus 30 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p---------- 96 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR---------- 96 (302)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS----------
T ss_pred CcEEEEcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC----------
Confidence 57899999999999997 79999999999999999999999887778899999999999999998654
Q ss_pred CccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCC
Q 010571 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDR 162 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~ 162 (507)
.+|.+|+++.++++||++||..... ..+++++||+.+++|+.++ ++|.+|.+|+++.++++||++||.+.
T Consensus 97 ------~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 97 ------DRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp ------SCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEET
T ss_pred ------ccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecC---CCCCcccCceEEEECCEEEEEeCCCC
Confidence 4899999999999999999987644 3789999999999999997 89999999999999999999999866
Q ss_pred CC-CccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCC
Q 010571 163 SR-KLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV 241 (507)
Q Consensus 163 ~~-~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p 241 (507)
.. ...+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.++....+++++||+.+++|+.+ .++|
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~~ 239 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV---ADMN 239 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEE---CCCS
T ss_pred CCCccccEEEEEeCCCCcEEECC---CCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeC---CCCC
Confidence 54 35789999999999999996 67889999999888 55699999998777789999999999999997 5688
Q ss_pred CCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEec-cCCCCCCCCCCCCceE
Q 010571 242 TGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILT-SVKGRNPLASEGLSVC 301 (507)
Q Consensus 242 ~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~-~~~~~~p~~~~~~~~~ 301 (507)
.+|..|++++++++|||+||.+.....+++++||+.+++|+.++ .+ |.+|.+++++
T Consensus 240 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~~r~~~~~~ 296 (302)
T 2xn4_A 240 MCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCM----STGRSYAGVT 296 (302)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCC----SSCCBSCEEE
T ss_pred CccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCccc----CcccccceEE
Confidence 89999999999999999999877666789999999999999986 44 4455555443
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-43 Score=343.79 Aligned_cols=264 Identities=18% Similarity=0.234 Sum_probs=236.1
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCC----CCCccCCceEEEECCCCceeEeeeccccccCc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGS----RNGRFLSDVQVFDLRSLAWSNLRLETELDADK 78 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~----~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~ 78 (507)
+++|+||+.++.|..++ .+|.+|.+|+++++++.||++||. .+....+++++||+.+++|..++.++
T Consensus 39 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p------ 109 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMS------ 109 (308)
T ss_dssp CCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCS------
T ss_pred ceEEEEcCCCCeEeECC---CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCC------
Confidence 57899999999999997 799999999999999999999998 55667889999999999999987654
Q ss_pred cccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEc
Q 010571 79 TEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFG 158 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~G 158 (507)
.+|.+|+++.++++||++||..... ..+++++||+.+++|+.++ ++|.+|.+|+++.++++||++|
T Consensus 110 ----------~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~G 175 (308)
T 1zgk_A 110 ----------VPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVA---PMLTRRIGVGVAVLNRLLYAVG 175 (308)
T ss_dssp ----------SCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEC
T ss_pred ----------cCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECC---CCCccccceEEEEECCEEEEEe
Confidence 4899999999999999999987643 3678999999999999997 8999999999999999999999
Q ss_pred CcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecC
Q 010571 159 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKG 238 (507)
Q Consensus 159 G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~ 238 (507)
|.+.... .+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+ .
T Consensus 176 G~~~~~~-~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---~ 247 (308)
T 1zgk_A 176 GFDGTNR-LNSAECYYPERNEWRMIT---AMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFV---A 247 (308)
T ss_dssp CBCSSCB-CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC---C
T ss_pred CCCCCCc-CceEEEEeCCCCeEeeCC---CCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC---C
Confidence 9976653 889999999999999986 67889999999988 56699999998877889999999999999997 5
Q ss_pred CCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceE
Q 010571 239 DLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVC 301 (507)
Q Consensus 239 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~ 301 (507)
++|.+|..|++++++++|||+||.+.....+++++||+.+++|+.++.+ |.+|.+++++
T Consensus 248 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~----p~~r~~~~~~ 306 (308)
T 1zgk_A 248 PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRM----TSGRSGVGVA 306 (308)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC----SSCCBSCEEE
T ss_pred CCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCC----CCCcccceeE
Confidence 7889999999999999999999988776788999999999999999877 4455565443
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.1e-43 Score=337.11 Aligned_cols=264 Identities=19% Similarity=0.298 Sum_probs=236.3
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCc---eeEeeeccccccCcc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA---WSNLRLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~---W~~~~~~~~~~~~~~ 79 (507)
+++|+||+.++.|..++ .+|.+|.+|+++++++.||++||..+....+++++||+.+++ |..++.+
T Consensus 31 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~-------- 99 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM-------- 99 (301)
T ss_dssp CCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC--------
T ss_pred eEEEEEcCCCCeEEeCC---CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC--------
Confidence 57899999999999998 689999999999999999999998877788999999999999 9998755
Q ss_pred ccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcC
Q 010571 80 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGG 159 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG 159 (507)
|.+|..|+++.++++||++||...... .+++++||+.+++|+.++ ++|.+|.+|+++.++++||++||
T Consensus 100 --------p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG 167 (301)
T 2vpj_A 100 --------NVRRGLAGATTLGDMIYVSGGFDGSRR-HTSMERYDPNIDQWSMLG---DMQTAREGAGLVVASGVIYCLGG 167 (301)
T ss_dssp --------SSCCBSCEEEEETTEEEEECCBCSSCB-CCEEEEEETTTTEEEEEE---ECSSCCBSCEEEEETTEEEEECC
T ss_pred --------CCCccceeEEEECCEEEEEcccCCCcc-cceEEEEcCCCCeEEECC---CCCCCcccceEEEECCEEEEECC
Confidence 448999999999999999999886543 789999999999999997 78999999999999999999999
Q ss_pred cCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCC
Q 010571 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 160 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
.+... ..+++++||+.+++|+.+. ++|.+|..|+++.+ +++|||+||.+.....+++++||+.+++|+.+ +.
T Consensus 168 ~~~~~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~ 239 (301)
T 2vpj_A 168 YDGLN-ILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV---TS 239 (301)
T ss_dssp BCSSC-BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE---CC
T ss_pred CCCCc-ccceEEEEeCCCCcEEeCC---CCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC---CC
Confidence 87654 6889999999999999996 67889999999988 55699999998777789999999999999997 56
Q ss_pred CCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceE
Q 010571 240 LVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVC 301 (507)
Q Consensus 240 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~ 301 (507)
+|.+|..|++++++++|||+||.+.....+++++||+.+++|+.++.++ .+|.+++++
T Consensus 240 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~r~~~~~~ 297 (301)
T 2vpj_A 240 MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG----TQRCDAGVC 297 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE----EEEESCEEE
T ss_pred CCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC----cccccceEE
Confidence 8999999999999999999999877766789999999999999998773 455555443
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.2e-43 Score=340.37 Aligned_cols=273 Identities=15% Similarity=0.270 Sum_probs=236.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
.+.||+|||... .+++++||+.+++|..++.+ |.+|.+|+++.++++||++||.. ....
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~lyv~GG~~--~~~~ 69 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCP----------------FEKRRDAACVFWDNVVYILGGSQ--LFPI 69 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCC----------------SCCCBSCEEEEETTEEEEECCBS--SSBC
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCC----------------CcccceeEEEEECCEEEEEeCCC--CCCc
Confidence 488999999765 78999999999999998755 44899999999999999999988 3457
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCc
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH 196 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~ 196 (507)
+++++||+.+++|..++ ++|.+|.+|+++.++++||++||.+......+++++||+.+++|+.+. ++|.+|..|
T Consensus 70 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~ 143 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKL---GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSH 143 (306)
T ss_dssp CEEEEEETTTTEEEEEE---CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSC
T ss_pred ceEEEEeCCCCeEEECC---CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCccee
Confidence 89999999999999997 899999999999999999999999755567899999999999999996 688899999
Q ss_pred eEEEEcCcEEEEEeCCCCCcC----CCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEE
Q 010571 197 SAALHANRYLIVFGGCSHSIF----FNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETI 272 (507)
Q Consensus 197 ~~~~~~~~~l~i~GG~~~~~~----~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~ 272 (507)
+++.+ +++|||+||...... ++++++||+.+++|+.+ .++|.+|..|++++++++|||+||.+.....++++
T Consensus 144 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 219 (306)
T 3ii7_A 144 GMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL---CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVE 219 (306)
T ss_dssp EEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEE
T ss_pred EEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC---CCccchhhcceEEEECCEEEEEeCCCCCCCCceEE
Confidence 99988 556999999876655 89999999999999997 56899999999999999999999987766678999
Q ss_pred EEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCC-cCCeEEEEECCCCCCCCCcccCChhhhh
Q 010571 273 VLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPKIFQSPAAAA 348 (507)
Q Consensus 273 ~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~v~~~~~~~~~w~~~~~~~~~~~~~ 348 (507)
+||+.+++|+.++.+ |.++.+++++ +++ +.|||+||.++. ..++++.||+.++.|.....++.++...
T Consensus 220 ~yd~~~~~W~~~~~~----p~~r~~~~~~--~~~--~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 288 (306)
T 3ii7_A 220 YYDIKLNEWKMVSPM----PWKGVTVKCA--AVG--SIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTS 288 (306)
T ss_dssp EEETTTTEEEECCCC----SCCBSCCEEE--EET--TEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTT
T ss_pred EeeCCCCcEEECCCC----CCCccceeEE--EEC--CEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCccccccee
Confidence 999999999999766 3455555444 444 489999998754 6789999999999999987776665433
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=345.21 Aligned_cols=276 Identities=15% Similarity=0.196 Sum_probs=234.5
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCC-----C-CccCCceEEEECCCCceeEeeecccccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSR-----N-GRFLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-----~-~~~~~~~~~~d~~t~~W~~~~~~~~~~~ 76 (507)
+++|+|||.+++|...+. +.|.+|.+|+++++++.||++||.. . ....+++++||+.+++|..++.++
T Consensus 13 ~~~~~yd~~~~~W~~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p---- 86 (315)
T 4asc_A 13 EGAVAYDPAANECYCASL--SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP---- 86 (315)
T ss_dssp TEEEEEETTTTEEEEEEC--CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS----
T ss_pred CceEEECCCCCeEecCCC--CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC----
Confidence 578999999999987432 3477999999999999999999952 1 233456999999999999987654
Q ss_pred CccccCCccCCCCCccceeeEEECCEEEEEcccCC--CCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEE
Q 010571 77 DKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK--KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRL 154 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l 154 (507)
.+|.+|+++.++++||++||... .....+++++||+.+++|+.++ ++|.+|.+|+++.++++|
T Consensus 87 ------------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i 151 (315)
T 4asc_A 87 ------------SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGHTVLSHMDLV 151 (315)
T ss_dssp ------------SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEE
T ss_pred ------------cchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccceeEEEECCEE
Confidence 48999999999999999999763 3445788999999999999997 899999999999999999
Q ss_pred EEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 155 IIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 155 ~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
|++||.+......+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELA---PMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECC---CCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 999999666667899999999999999987 67889999999988 55699999998877889999999999999997
Q ss_pred eecCCCCCCCcceEEEEECCEEEEEeccCCC---------CCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEE
Q 010571 235 EIKGDLVTGRAGHAGITIDENWYIVGGGDNN---------NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII 305 (507)
Q Consensus 235 ~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~ 305 (507)
+++|.+|..|++++++++|||+||.+.. ...+++++||+.+++|+.+. |.+|.+++++.+
T Consensus 228 ---~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------~~~r~~~~~~~~-- 296 (315)
T 4asc_A 228 ---EAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------REIAYAAGATFL-- 296 (315)
T ss_dssp ---CCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE------SCSSCCSSCEEE--
T ss_pred ---CCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc------cCCcCccceEEe--
Confidence 5689999999999999999999997531 23578999999999999983 335666665544
Q ss_pred cCceEEEEEcc
Q 010571 306 EGEHHLVAFGG 316 (507)
Q Consensus 306 ~~~~~l~v~GG 316 (507)
++.|+++..
T Consensus 297 --~~~l~v~~~ 305 (315)
T 4asc_A 297 --PVRLNVLRL 305 (315)
T ss_dssp --EEEECGGGS
T ss_pred --CCEEEEEEe
Confidence 447887764
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=333.90 Aligned_cols=277 Identities=18% Similarity=0.253 Sum_probs=233.8
Q ss_pred EEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCC
Q 010571 33 AAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKK 112 (507)
Q Consensus 33 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 112 (507)
.+.+++.||++||... ...+++++||+.+++|..++.+ |.+|.+|+++.++++||++||....
T Consensus 11 ~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~lyv~GG~~~~ 73 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAEL----------------PSRRCRAGMVYMAGLVFAVGGFNGS 73 (302)
T ss_dssp ----CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCC----------------SSCCBSCEEEEETTEEEEESCBCSS
T ss_pred ccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccC----------------CcccccceEEEECCEEEEEeCcCCC
Confidence 3446889999999765 3578899999999999998754 4489999999999999999998755
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
. ..+++++||+.+++|+.++ ++|.+|.+|+++.++++||++||.+... ..+++++||+.+++|+.+. ++|.+
T Consensus 74 ~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~---~~p~~ 145 (302)
T 2xn4_A 74 L-RVRTVDSYDPVKDQWTSVA---NMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVA---PMNTR 145 (302)
T ss_dssp S-BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEEC---CCSSC
T ss_pred c-cccceEEECCCCCceeeCC---CCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecC---CCCCc
Confidence 4 3678999999999999998 8999999999999999999999987543 5789999999999999997 67889
Q ss_pred CCCceEEEEcCcEEEEEeCCCCC--cCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcce
Q 010571 193 RYDHSAALHANRYLIVFGGCSHS--IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~--~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d 270 (507)
|..|+++++ +++||++||.+.. ..++++++||+.+++|+.+ +++|.+|..|++++++++|||+||.++....++
T Consensus 146 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 221 (302)
T 2xn4_A 146 RSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI---AEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKS 221 (302)
T ss_dssp CBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCBSSSSBCCC
T ss_pred ccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC---CCCccccccccEEEECCEEEEECCCCCCcccce
Confidence 999999988 5569999998654 3578999999999999997 578899999999999999999999887666789
Q ss_pred EEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCC-cCCeEEEEECCCCCCCCCc-ccCChhh
Q 010571 271 TIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPK-IFQSPAA 346 (507)
Q Consensus 271 ~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~v~~~~~~~~~w~~~~-~~~~~~~ 346 (507)
+++||+.+++|+.++.++ .++.++.+ +++++ .||++||.++. ..+++++||+.++.|...+ .++.++.
T Consensus 222 ~~~yd~~~~~W~~~~~~~----~~r~~~~~--~~~~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~ 291 (302)
T 2xn4_A 222 VEVYDPTTNAWRQVADMN----MCRRNAGV--CAVNG--LLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRS 291 (302)
T ss_dssp EEEEETTTTEEEEECCCS----SCCBSCEE--EEETT--EEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCB
T ss_pred EEEEeCCCCCEeeCCCCC----CccccCeE--EEECC--EEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccc
Confidence 999999999999998764 34555543 34444 89999998754 5789999999999999876 5555553
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=335.21 Aligned_cols=275 Identities=19% Similarity=0.288 Sum_probs=238.4
Q ss_pred ECCEEEEEcC-CCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCC
Q 010571 36 FDQKLYIVGG-SRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSS 114 (507)
Q Consensus 36 ~~~~lyv~GG-~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 114 (507)
+++.||+||| .......+++++||+.+++|..++.+ |.+|.+|+++.++++||++||.....
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~l~v~GG~~~~~- 75 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSI----------------TRKRRYVASVSLHDRIYVIGGYDGRS- 75 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCC----------------SSCCBSCEEEEETTEEEEECCBCSSC-
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCC----------------ChhhccccEEEECCEEEEEcCCCCCc-
Confidence 6899999999 66677889999999999999998754 34899999999999999999987443
Q ss_pred CcceEEEEECCCCc---EEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 115 DSMIVRFIDLETNL---CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~~d~~t~~---W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
..+++++||+.+++ |+.+. ++|.+|..|+++.++++||++||.+... ..+++++||+.+++|+.+. ++|.
T Consensus 76 ~~~~~~~~d~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~---~~p~ 148 (301)
T 2vpj_A 76 RLSSVECLDYTADEDGVWYSVA---PMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLG---DMQT 148 (301)
T ss_dssp BCCCEEEEETTCCTTCCCEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEE---ECSS
T ss_pred cCceEEEEECCCCCCCeeEECC---CCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECC---CCCC
Confidence 47789999999999 99997 8999999999999999999999997554 4889999999999999997 5788
Q ss_pred CCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceE
Q 010571 192 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~ 271 (507)
+|..|+++++ +++||++||.+....++++++||+.+++|+.+ +++|.+|..|++++++++|||+||.+.....+++
T Consensus 149 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v 224 (301)
T 2vpj_A 149 AREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV---TPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSV 224 (301)
T ss_dssp CCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCE
T ss_pred CcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeC---CCCCcccccceEEEECCEEEEEeCCCCCcccceE
Confidence 9999999988 56699999998777889999999999999997 5789999999999999999999998876668899
Q ss_pred EEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCC-cCCeEEEEECCCCCCCCCcccCChhh
Q 010571 272 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPKIFQSPAA 346 (507)
Q Consensus 272 ~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~v~~~~~~~~~w~~~~~~~~~~~ 346 (507)
++||+.+++|+.++.+ |.++.+++++ ++++ .||++||.++. ..++++.||+.++.|.....++.++.
T Consensus 225 ~~yd~~~~~W~~~~~~----p~~r~~~~~~--~~~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~ 292 (301)
T 2vpj_A 225 EAYNIRTDSWTTVTSM----TTPRCYVGAT--VLRG--RLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRC 292 (301)
T ss_dssp EEEETTTTEEEEECCC----SSCCBSCEEE--EETT--EEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEE
T ss_pred EEEeCCCCcEEECCCC----CCcccceeEE--EECC--EEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccc
Confidence 9999999999999866 3455555443 4444 79999998754 46899999999999998877666553
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-42 Score=337.85 Aligned_cols=275 Identities=16% Similarity=0.233 Sum_probs=233.2
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCC------CccCCceEEEECCCCceeEeeecccccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRN------GRFLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~------~~~~~~~~~~d~~t~~W~~~~~~~~~~~ 76 (507)
.++|+|||.+++|...+. +.|.||.+|+++++++.||++||... ....+.+++||+.+++|..++.++
T Consensus 24 ~~~~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p---- 97 (318)
T 2woz_A 24 TAAVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLP---- 97 (318)
T ss_dssp SEEEEEETTTTEEEEEEE--CTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBS----
T ss_pred cceEEECCCCCceecccC--CccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCC----
Confidence 457999999999998653 45689999999999999999999531 122345999999999999987654
Q ss_pred CccccCCccCCCCCccceeeEEECCEEEEEcccCC-CCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEE
Q 010571 77 DKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK-KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLI 155 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~ 155 (507)
.+|.+|++++++++||++||... .....+++++||+.+++|+.+. ++|.+|.+|++++++++||
T Consensus 98 ------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iy 162 (318)
T 2woz_A 98 ------------SARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPIKVYGHNVISHNGMIY 162 (318)
T ss_dssp ------------SCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSSCEESCEEEEETTEEE
T ss_pred ------------ccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCCcccccEEEEECCEEE
Confidence 48999999999999999999874 3345789999999999999997 8999999999999999999
Q ss_pred EEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeee
Q 010571 156 IFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 156 ~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
++||.+......+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||......++++++||+.+++|+.+
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~- 237 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM- 237 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEEC-
T ss_pred EEcCCCCCCCccceEEEEcCCCCEEEECC---CCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEEC-
Confidence 99998766667899999999999999997 67889999999888 55699999998777789999999999999997
Q ss_pred ecCCCCCCCcceEEEEECCEEEEEeccCCC---------CCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEc
Q 010571 236 IKGDLVTGRAGHAGITIDENWYIVGGGDNN---------NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE 306 (507)
Q Consensus 236 ~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~ 306 (507)
+++|.+|..|++++++++|||+||.+.. ...+++++||+.+++|+.+ + |.++.+++.+.+
T Consensus 238 --~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~----~~~r~~~~~~~~--- 306 (318)
T 2woz_A 238 --TEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L----KEIRYASGASCL--- 306 (318)
T ss_dssp --CCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E----SCCGGGTTCEEE---
T ss_pred --CCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c----ccccccccceee---
Confidence 5688999999999999999999997642 2367899999999999998 3 345566665544
Q ss_pred CceEEEEEc
Q 010571 307 GEHHLVAFG 315 (507)
Q Consensus 307 ~~~~l~v~G 315 (507)
++.||++.
T Consensus 307 -~~~iyi~~ 314 (318)
T 2woz_A 307 -ATRLNLFK 314 (318)
T ss_dssp -EEEEEGGG
T ss_pred -CCEEEEEE
Confidence 44787764
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=330.21 Aligned_cols=262 Identities=18% Similarity=0.275 Sum_probs=222.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccC-----C
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY-----K 111 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-----~ 111 (507)
.+.||++|| +++++||+.+++|.. +.+ +.|.+|.+|+++.++++||++||.. .
T Consensus 4 ~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~--------------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 61 (315)
T 4asc_A 4 QDLIFMISE-------EGAVAYDPAANECYC-ASL--------------SSQVPKNHVSLVTKENQVFVAGGLFYNEDNK 61 (315)
T ss_dssp EEEEEEEET-------TEEEEEETTTTEEEE-EEC--------------CCCSCSSEEEEECTTCCEEEEEEEEECSSCS
T ss_pred ceEEEEEcC-------CceEEECCCCCeEec-CCC--------------CCCCCccceEEEEECCEEEEEcCcccCCCCC
Confidence 467999999 679999999999986 333 2356899999999999999999962 2
Q ss_pred CCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcC--CCCCccCcEEEEEcCCCcEEEeecCCCC
Q 010571 112 KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGED--RSRKLLNDVHFLDLETMTWDAVEVTQTP 189 (507)
Q Consensus 112 ~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~--~~~~~~~~~~~~d~~t~~W~~~~~~g~~ 189 (507)
.....+++++||+.+++|+.++ ++|.+|.+|+++.++++||++||.+ ......+++++||+.+++|+.+. ++
T Consensus 62 ~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~ 135 (315)
T 4asc_A 62 EDPMSAYFLQFDHLDSEWLGMP---PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PL 135 (315)
T ss_dssp SSCEEEEEEEEETTTTEEEECC---CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CC
T ss_pred ccccccceEEecCCCCeEEECC---CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CC
Confidence 2223556999999999999987 8999999999999999999999975 33457899999999999999987 68
Q ss_pred CCCCCCceEEEEcCcEEEEEeCC-CCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCc
Q 010571 190 PAPRYDHSAALHANRYLIVFGGC-SHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGC 268 (507)
Q Consensus 190 p~~r~~~~~~~~~~~~l~i~GG~-~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~ 268 (507)
|.+|..|++++++ ++|||+||. .....++++++||+.+++|+.+ +++|.+|..|++++++++|||+||.+.....
T Consensus 136 p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 211 (315)
T 4asc_A 136 PYVVYGHTVLSHM-DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL---APMQTARSLFGATVHDGRIIVAAGVTDTGLT 211 (315)
T ss_dssp SSCCBSCEEEEET-TEEEEECCBCTTSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEEEEEECSSSEE
T ss_pred CCcccceeEEEEC-CEEEEEeCCCCCCcccceEEEEeCCCCeEEEC---CCCCCchhceEEEEECCEEEEEeccCCCCcc
Confidence 8899999999884 569999999 5557789999999999999997 5689999999999999999999998877678
Q ss_pred ceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCC----------CcCCeEEEEECCCCCCCCC
Q 010571 269 QETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG----------KYNNEVFVMRLKPRDIPRP 338 (507)
Q Consensus 269 ~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~----------~~~~~v~~~~~~~~~w~~~ 338 (507)
+++++||+.+++|+.++.+ |.+|.+++++ ++++ .|||+||.++ ...+++++||+.++.|+.+
T Consensus 212 ~~~~~yd~~~~~W~~~~~~----p~~r~~~~~~--~~~~--~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 212 SSAEVYSITDNKWAPFEAF----PQERSSLSLV--SLVG--TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEEETTTTEEEEECCC----SSCCBSCEEE--EETT--EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCeEEECCCC----CCcccceeEE--EECC--EEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 8999999999999999876 4455555444 4444 8999999853 3468999999999999987
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-40 Score=329.57 Aligned_cols=284 Identities=14% Similarity=0.146 Sum_probs=220.9
Q ss_pred CCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECC--CCceeEeeeccccccCccccCCccCCCCCccceeeEEEC
Q 010571 23 ARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLR--SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWG 100 (507)
Q Consensus 23 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~--t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~ 100 (507)
++|.+|.+|+++++++.|||+||... +++++||+. +++|..++.++. .+|.+|++++++
T Consensus 5 ~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~---------------~~R~~~~~~~~~ 65 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPG---------------GPRDQATSAFID 65 (357)
T ss_dssp CCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTT---------------CCCBSCEEEEET
T ss_pred CCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCC---------------CcCccceEEEEC
Confidence 68999999999999999999999653 579999998 489999886541 489999999999
Q ss_pred CEEEEEcccCC----CCCCcceEEEEECCCCcEEEeecCCCCC-CCcccceEEEECCEEEEEcCcCCCC-----------
Q 010571 101 TKLLILGGHYK----KSSDSMIVRFIDLETNLCGVMETSGKVP-VARGGHSVTLVGSRLIIFGGEDRSR----------- 164 (507)
Q Consensus 101 ~~iyv~GG~~~----~~~~~~~~~~~d~~t~~W~~~~~~g~~p-~~r~~~~~~~~~~~l~~~GG~~~~~----------- 164 (507)
++|||+||... .....+++++||+.+++|+.+. +++ .+|.+|++++++++||++||.+...
T Consensus 66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLM---SHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECS---CCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECC---CCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhc
Confidence 99999999822 2235778999999999999998 455 9999999999999999999986431
Q ss_pred ----------------------CccCcEEEEEcCCCcEEEeecCCCCCCCCCC-ceEEEEcCcEEEEEeCCCCC-cCCCc
Q 010571 165 ----------------------KLLNDVHFLDLETMTWDAVEVTQTPPAPRYD-HSAALHANRYLIVFGGCSHS-IFFND 220 (507)
Q Consensus 165 ----------------------~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~-~~~~~~~~~~l~i~GG~~~~-~~~~~ 220 (507)
...+++++||+.+++|+.+. ++|.+|.. |+++++ +++||||||.... ..+++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG---ESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---ECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCC
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC---CCCCCCcccccEEEE-CCEEEEEeeecCCCcccCc
Confidence 24689999999999999996 46655544 888877 5569999997543 45789
Q ss_pred EEEEEC--CCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCC-----------------CCcceEEEEEcCcCee
Q 010571 221 LHVLDL--QTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNN-----------------NGCQETIVLNMTKLAW 281 (507)
Q Consensus 221 i~~~d~--~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-----------------~~~~d~~~~d~~~~~W 281 (507)
+++||+ .+++|+.+... +.|.+|..|++++++++|||+||.+.. ..++++++||+.+++|
T Consensus 219 v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W 297 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW 297 (357)
T ss_dssp EEEEECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C
T ss_pred eEEEEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCce
Confidence 999987 89999997432 233446688899999999999996432 2346899999999999
Q ss_pred EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCC--cCCeEEEEECCCCCCCCCccc
Q 010571 282 SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK--YNNEVFVMRLKPRDIPRPKIF 341 (507)
Q Consensus 282 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~--~~~~v~~~~~~~~~w~~~~~~ 341 (507)
+.++.+| .+|.++++ +++++ .|||+||.+.. ..++++.|+++.++|......
T Consensus 298 ~~~~~~p----~~r~~~~~--~~~~~--~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 298 DKSGELS----QGRAYGVS--LPWNN--SLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEEECS----SCCBSSEE--EEETT--EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eeCCCCC----CCccccee--EEeCC--EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 9998764 45555544 34444 89999998753 468999999999999875443
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-40 Score=321.82 Aligned_cols=276 Identities=17% Similarity=0.268 Sum_probs=228.3
Q ss_pred CCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEE
Q 010571 25 PSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLL 104 (507)
Q Consensus 25 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iy 104 (507)
..||.++.. .+.||++||. ++++||+.+++|...+. ..|.+|.+|+++..+++||
T Consensus 6 ~~~r~~~~~---~~~i~~~GG~-------~~~~yd~~~~~W~~~~~---------------~~~~~r~~~~~~~~~~~ly 60 (318)
T 2woz_A 6 DIPRHGMFV---KDLILLVNDT-------AAVAYDPMENECYLTAL---------------AEQIPRNHSSIVTQQNQVY 60 (318)
T ss_dssp SSCCCCCSE---EEEEEEECSS-------EEEEEETTTTEEEEEEE---------------CTTSCSSEEEEECSSSCEE
T ss_pred cccccccee---cchhhhcccc-------ceEEECCCCCceecccC---------------CccCCccceEEEEECCEEE
Confidence 467777664 4689999993 48999999999988432 2246899999999999999
Q ss_pred EEcccCCC-----CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCC-CCCccCcEEEEEcCCC
Q 010571 105 ILGGHYKK-----SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDR-SRKLLNDVHFLDLETM 178 (507)
Q Consensus 105 v~GG~~~~-----~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~-~~~~~~~~~~~d~~t~ 178 (507)
++||.... ....+++++||+.+++|..++ ++|.+|.+|+++.++++||++||.+. .....+++++||+.++
T Consensus 61 v~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 137 (318)
T 2woz_A 61 VVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP---PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA 137 (318)
T ss_dssp EEESSCC-------CCCBEEEEEETTTTEEEECS---CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT
T ss_pred EECCcccCccccCCCccccEEEEeCCCCcEEECC---CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC
Confidence 99996321 123456999999999999997 89999999999999999999999863 3456889999999999
Q ss_pred cEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCC-CCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEE
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCS-HSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWY 257 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~-~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~ 257 (507)
+|+.+. ++|.+|.+|+++++ +++|||+||.. ....++++++||+.+++|+.+ +++|.+|..|++++++++||
T Consensus 138 ~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iy 210 (318)
T 2woz_A 138 KWSEVK---NLPIKVYGHNVISH-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL---APMKTPRSMFGVAIHKGKIV 210 (318)
T ss_dssp EEEEEC---CCSSCEESCEEEEE-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEE
T ss_pred CEeECC---CCCCcccccEEEEE-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC---CCCCCCcccceEEEECCEEE
Confidence 999997 67889999999887 55699999984 346789999999999999997 57889999999999999999
Q ss_pred EEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCC----------CcCCeEEE
Q 010571 258 IVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG----------KYNNEVFV 327 (507)
Q Consensus 258 v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~----------~~~~~v~~ 327 (507)
|+||.+.....+++++||+.+++|+.++.+ |.+|.+++++ ++++ .||++||.+. ...+++|+
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~----p~~r~~~~~~--~~~~--~i~v~GG~~~~~~~~~~~~~~~~~~v~~ 282 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKTNKWEVMTEF----PQERSSISLV--SLAG--SLYAIGGFAMIQLESKEFAPTEVNDIWK 282 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTTCCEEECCCC----SSCCBSCEEE--EETT--EEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred EEcCcCCCCccceEEEEECCCCeEEECCCC----CCcccceEEE--EECC--EEEEECCeeccCCCCceeccceeeeEEE
Confidence 999987766678999999999999999776 3455555433 4444 8999999864 24789999
Q ss_pred EECCCCCCCCCcccCChh
Q 010571 328 MRLKPRDIPRPKIFQSPA 345 (507)
Q Consensus 328 ~~~~~~~w~~~~~~~~~~ 345 (507)
||+.++.|+.+ ++.++
T Consensus 283 yd~~~~~W~~~--~~~~r 298 (318)
T 2woz_A 283 YEDDKKEWAGM--LKEIR 298 (318)
T ss_dssp EETTTTEEEEE--ESCCG
T ss_pred EeCCCCEehhh--ccccc
Confidence 99999999987 44444
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.1e-38 Score=315.30 Aligned_cols=260 Identities=19% Similarity=0.331 Sum_probs=211.0
Q ss_pred CCCeEeeCC--CCCeEEeccCCCCC-CccccceEEEECCEEEEEcCC-C----CCccCCceEEEECCCCceeEeeecccc
Q 010571 3 SGSWHLELP--YDLWVTLPVSGARP-SPRYKHAAAVFDQKLYIVGGS-R----NGRFLSDVQVFDLRSLAWSNLRLETEL 74 (507)
Q Consensus 3 ~~~~~~d~~--~~~W~~~~~~~~~p-~~r~~~~~~~~~~~lyv~GG~-~----~~~~~~~~~~~d~~t~~W~~~~~~~~~ 74 (507)
+++|+||+. ++.|..++ .+| .+|.+|+++++++.||||||. . ....++++++||+.+++|..+++++
T Consensus 31 ~~~~~~d~~~~~~~W~~~~---~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-- 105 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALA---AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-- 105 (357)
T ss_dssp TCEEEEETTSSSCCEEECC---CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--
T ss_pred CeEEEEccccCCCCeeECC---CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--
Confidence 578999998 59999998 688 899999999999999999997 2 2456789999999999999988653
Q ss_pred ccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCC---------------------------------CCcceEEE
Q 010571 75 DADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKS---------------------------------SDSMIVRF 121 (507)
Q Consensus 75 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---------------------------------~~~~~~~~ 121 (507)
|.+|.+|++++++++||++||..... ...+++++
T Consensus 106 -------------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 106 -------------PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp -------------SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred -------------CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 46899999999999999999976432 13578999
Q ss_pred EECCCCcEEEeecCCCCCCCcc-cceEEEECCEEEEEcCcCCCCCccCcEEEEEc--CCCcEEEeecCCCCCCCCCCceE
Q 010571 122 IDLETNLCGVMETSGKVPVARG-GHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL--ETMTWDAVEVTQTPPAPRYDHSA 198 (507)
Q Consensus 122 ~d~~t~~W~~~~~~g~~p~~r~-~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~--~t~~W~~~~~~g~~p~~r~~~~~ 198 (507)
||+.+++|+.+. ++|.+|. +++++.++++||+|||.+......++++.||+ .+++|+.+... +.|.+|.+|++
T Consensus 173 yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~ 248 (357)
T 2uvk_A 173 FDPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFA 248 (357)
T ss_dssp EETTTTEEEEEE---ECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS-STTTCCBSCEE
T ss_pred EeCCCCcEEECC---CCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC-CCCcccccceE
Confidence 999999999997 7887654 49999999999999998766666889999987 89999999743 33444667778
Q ss_pred EEEcCcEEEEEeCCCC-----------------CcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEec
Q 010571 199 ALHANRYLIVFGGCSH-----------------SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGG 261 (507)
Q Consensus 199 ~~~~~~~l~i~GG~~~-----------------~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG 261 (507)
+++ +++||||||.+. ...++++++||+.+++|+.+ +++|.+|..|++++++++||||||
T Consensus 249 ~~~-~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 249 GIS-NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGRAYGVSLPWNNSLLIIGG 324 (357)
T ss_dssp EEE-TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE---EECSSCCBSSEEEEETTEEEEEEE
T ss_pred EEE-CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC---CCCCCCcccceeEEeCCEEEEEee
Confidence 877 556999999642 22346899999999999997 568899999999999999999999
Q ss_pred cCCCCC-cceEEEEEcCcCeeEEeccCC
Q 010571 262 GDNNNG-CQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 262 ~~~~~~-~~d~~~~d~~~~~W~~~~~~~ 288 (507)
.+.... ++++++|+.++++|..+...+
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 876544 689999999999999987654
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.3e-38 Score=337.93 Aligned_cols=284 Identities=14% Similarity=0.149 Sum_probs=230.0
Q ss_pred CCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEee-eccccccCccccCCccCCCCCccceeeEEE--
Q 010571 23 ARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLR-LETELDADKTEDSGLLEVLPPMSDHCMVKW-- 99 (507)
Q Consensus 23 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~-~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-- 99 (507)
..|.+|++|+++ +++.||++||... ...+++++||+.+++|..++ +++. ...|.+|.+|+++++
T Consensus 384 ~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~-----------~~~p~~R~~hs~~~~~~ 450 (695)
T 2zwa_A 384 CPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSS-----------SEVPVARMCHTFTTISR 450 (695)
T ss_dssp CTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCC-----------SCCCCCCBSCEEEEETT
T ss_pred CCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCC-----------CCCCccccceEEEEEcc
Confidence 466677776654 8999999999877 77899999999999999998 5332 245779999999999
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
+++||++||........+++++||+.+++|+.+. ++|.+|.+|+++++ +++||+|||.+... ++++||+.++
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~ 523 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE 523 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC
Confidence 9999999999876656788999999999999997 89999999999997 99999999997654 8999999999
Q ss_pred cEEEeecCCCCCCCCCCceEEEEc-C-cEEEEEeCCCCC--cCCCcEEEEECCCCc------EEeeeecCCCCCCCcceE
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHA-N-RYLIVFGGCSHS--IFFNDLHVLDLQTNE------WSQPEIKGDLVTGRAGHA 248 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~-~-~~l~i~GG~~~~--~~~~~i~~~d~~~~~------W~~~~~~~~~p~~r~~~~ 248 (507)
+|+.+.+.|++|.+|.+|++++++ + ++||||||...+ ..++++++||+.+++ |+.+.. .++.+|.+|+
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~ 601 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQ 601 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCE
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCCCcccce
Confidence 999999888899999999977764 2 679999998543 678999999999999 888743 1257899999
Q ss_pred EEEEC-CEEEEEeccCCCC---CcceEEEEEcCcCeeEEeccCCCCC----CCCCCCCceEEEEEcCceEEEEEcccC--
Q 010571 249 GITID-ENWYIVGGGDNNN---GCQETIVLNMTKLAWSILTSVKGRN----PLASEGLSVCSAIIEGEHHLVAFGGYN-- 318 (507)
Q Consensus 249 ~~~~~-~~l~v~GG~~~~~---~~~d~~~~d~~~~~W~~~~~~~~~~----p~~~~~~~~~~~~~~~~~~l~v~GG~~-- 318 (507)
+++++ ++|||+||.+... ..+++++||+.+++|+.++ ++... ++.+.+|+ ++.+.+ +.|||+||..
T Consensus 602 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~--~~~~~~-g~i~v~GGg~~c 677 (695)
T 2zwa_A 602 IKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFS--LVSTSM-GTIHIIGGGATC 677 (695)
T ss_dssp EEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCE--EECC----CEEEECCEEEC
T ss_pred EEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee-ccccccCCCCccceeee--EEEeCC-CEEEEEeCCccC
Confidence 99999 9999999986553 4789999999999999653 32211 12344444 333333 2799999954
Q ss_pred ---CCcCCeEEEEECCC
Q 010571 319 ---GKYNNEVFVMRLKP 332 (507)
Q Consensus 319 ---~~~~~~v~~~~~~~ 332 (507)
+...+++|.+|+..
T Consensus 678 fsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 678 YGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp TTSCEEECCCEEEEECC
T ss_pred cCccccccceEEEEEEc
Confidence 34467999998753
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=6.3e-35 Score=311.38 Aligned_cols=254 Identities=19% Similarity=0.217 Sum_probs=210.2
Q ss_pred CCCeEeeCCCCCeEEecc---CCCCCCccccceEEEE--CCEEEEEcCCCCCc-cCCceEEEECCCCceeEeeecccccc
Q 010571 3 SGSWHLELPYDLWVTLPV---SGARPSPRYKHAAAVF--DQKLYIVGGSRNGR-FLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~---~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~-~~~~~~~~d~~t~~W~~~~~~~~~~~ 76 (507)
+++|+||+.++.|+.++. .+.+|.+|.+|+++++ ++.|||+||..... .++++++||+.+++|+.++.++
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p---- 487 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLS---- 487 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCS----
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCC----
Confidence 679999999999999983 2558999999999999 99999999987643 7899999999999999987654
Q ss_pred CccccCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEEC---C
Q 010571 77 DKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVG---S 152 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~---~ 152 (507)
.+|.+|+++++ +++||++||..... ++++||+.+++|+.+.+.|.+|.+|.+|++++++ +
T Consensus 488 ------------~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 488 ------------HTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp ------------BCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred ------------CCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 48999999997 99999999987655 7999999999999999777799999999988877 8
Q ss_pred EEEEEcCcCCCC-CccCcEEEEEcCCCc------EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCc---CCCcEE
Q 010571 153 RLIIFGGEDRSR-KLLNDVHFLDLETMT------WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---FFNDLH 222 (507)
Q Consensus 153 ~l~~~GG~~~~~-~~~~~~~~~d~~t~~------W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~---~~~~i~ 222 (507)
+||++||....+ ...+++++||+.+++ |+.+.. .++.+|.+|+++++++++|||+||.+... ..++++
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 999999996554 568999999999999 888874 23578999999999757799999986553 689999
Q ss_pred EEECCCCcEEeeeecCC----CCCCCcceEEEEECC-EEEEEeccCCC----CCcceEEEEEcCc
Q 010571 223 VLDLQTNEWSQPEIKGD----LVTGRAGHAGITIDE-NWYIVGGGDNN----NGCQETIVLNMTK 278 (507)
Q Consensus 223 ~~d~~~~~W~~~~~~~~----~p~~r~~~~~~~~~~-~l~v~GG~~~~----~~~~d~~~~d~~~ 278 (507)
+||+.+++|+.+..... .++.+.+|+++++++ +|||+||.... ...+++|.+|+..
T Consensus 630 ~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 630 SLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp EEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred EEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 99999999997532111 122577899888876 89999996432 2256788887643
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.7e-33 Score=300.15 Aligned_cols=305 Identities=11% Similarity=0.059 Sum_probs=225.0
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCc------cCCceEEEECCCCceeEeeeccccc
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGR------FLSDVQVFDLRSLAWSNLRLETELD 75 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~------~~~~~~~~d~~t~~W~~~~~~~~~~ 75 (507)
+...|||..++|..++ ++ ||..|+++++ +++||++||..... ..+.+++||+.+++|..++.++.
T Consensus 167 ~~~~~dp~~~~W~~~~---~~--P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-- 239 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTI---DL--PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-- 239 (656)
T ss_dssp CCCCCCTTSCEEEEEE---EC--SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC--
T ss_pred ccccCCCCCCeeeeec---cC--CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC--
Confidence 3558999999999887 34 5577777777 99999999976532 23479999999999999887643
Q ss_pred cCccccCCccCCCCCcccee--eEE-ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-C
Q 010571 76 ADKTEDSGLLEVLPPMSDHC--MVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-G 151 (507)
Q Consensus 76 ~~~~~~~~~~~~p~~r~~~~--~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~ 151 (507)
+|..|+ ++. .+++||++||.... ++++||+.+++|..+. +||.+|.+|+++++ +
T Consensus 240 --------------~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~d 297 (656)
T 1k3i_A 240 --------------KHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGP---DMQVARGYQSSATMSD 297 (656)
T ss_dssp --------------SCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECC---CCSSCCSSCEEEECTT
T ss_pred --------------CCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECC---CCCccccccceEEecC
Confidence 444443 343 58999999997643 5999999999999997 89999999999999 9
Q ss_pred CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCC--CCCCCCCCceEEEEcCcEEEEEeCCCCC----cCCCcEEEEE
Q 010571 152 SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ--TPPAPRYDHSAALHANRYLIVFGGCSHS----IFFNDLHVLD 225 (507)
Q Consensus 152 ~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g--~~p~~r~~~~~~~~~~~~l~i~GG~~~~----~~~~~i~~~d 225 (507)
++||++||........+++++||+.+++|+.+...+ +++..+. + ++...++++|+|||.++. ...++++.||
T Consensus 298 g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd 375 (656)
T 1k3i_A 298 GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-Q-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY 375 (656)
T ss_dssp SCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-T-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEE
T ss_pred CeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-c-ceeecCCceEEEECCCCcEEEecCccceeeee
Confidence 999999996444446889999999999999985433 2333333 2 333345669999998654 3468899999
Q ss_pred CCCCcEEeeeecCCC----CCCCcceEEEE---ECCEEEEEeccCC---CCCcc---eEEEEEcCcCeeEEec--cCCCC
Q 010571 226 LQTNEWSQPEIKGDL----VTGRAGHAGIT---IDENWYIVGGGDN---NNGCQ---ETIVLNMTKLAWSILT--SVKGR 290 (507)
Q Consensus 226 ~~~~~W~~~~~~~~~----p~~r~~~~~~~---~~~~l~v~GG~~~---~~~~~---d~~~~d~~~~~W~~~~--~~~~~ 290 (507)
+.++.|..+...... +.++..+++++ ++++|||+||... ...++ .+++||+.++.|..+. .+
T Consensus 376 ~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m--- 452 (656)
T 1k3i_A 376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL--- 452 (656)
T ss_dssp CSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC---
T ss_pred cCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC---
Confidence 999998875322211 22344555554 4899999999643 22234 6889999999999986 44
Q ss_pred CCCCCCCCceEEEEEcCceEEEEEcccCC-------CcCCeEEEEECCCCCCCCCcccCChhh
Q 010571 291 NPLASEGLSVCSAIIEGEHHLVAFGGYNG-------KYNNEVFVMRLKPRDIPRPKIFQSPAA 346 (507)
Q Consensus 291 ~p~~~~~~~~~~~~~~~~~~l~v~GG~~~-------~~~~~v~~~~~~~~~w~~~~~~~~~~~ 346 (507)
|.+|..+ +++++++ +.|||+||.+. ...+++++||+.++.|.....++.++.
T Consensus 453 -p~~R~~~--~~~~l~~-g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~ 511 (656)
T 1k3i_A 453 -YFARTFH--TSVVLPD-GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRV 511 (656)
T ss_dssp -SSCCBSC--EEEECTT-SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCC
T ss_pred -CCCcccC--CeEECCC-CCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccc
Confidence 3344444 3344533 37999999752 346899999999999998776666654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1e-32 Score=294.08 Aligned_cols=296 Identities=9% Similarity=0.055 Sum_probs=220.1
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccce--EEE-ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccc
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHA--AAV-FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~--~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~ 80 (507)
.+|+||+.+++|..++ .+|.+|..|+ +++ .++.||++||.... ++++||+.+++|..++.++
T Consensus 220 ~~~~yd~~t~~w~~~~---~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~-------- 284 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRT---VTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQ-------- 284 (656)
T ss_dssp EEEEECTTTCCBCCCE---EEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCS--------
T ss_pred EEEEEeCCCCcEEeCc---ccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCC--------
Confidence 5789999999999987 4677776554 444 48999999996543 7999999999999987654
Q ss_pred cCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCC--CCCCCcccceEEEECCEEEEE
Q 010571 81 DSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSG--KVPVARGGHSVTLVGSRLIIF 157 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g--~~p~~r~~~~~~~~~~~l~~~ 157 (507)
.+|.+|+++.+ +++||++||........+++++||+.+++|+.++..+ +++.++.. +++..++++|++
T Consensus 285 --------~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~ 355 (656)
T 1k3i_A 285 --------VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLF 355 (656)
T ss_dssp --------SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEE
T ss_pred --------ccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEE
Confidence 48999999999 9999999996444445788999999999999985332 34445443 555578999999
Q ss_pred cCcCCCC---CccCcEEEEEcCCCcEEEeecCCCC----CCCCCCceEEEE--cCcEEEEEeCCCC---CcCCC---cEE
Q 010571 158 GGEDRSR---KLLNDVHFLDLETMTWDAVEVTQTP----PAPRYDHSAALH--ANRYLIVFGGCSH---SIFFN---DLH 222 (507)
Q Consensus 158 GG~~~~~---~~~~~~~~~d~~t~~W~~~~~~g~~----p~~r~~~~~~~~--~~~~l~i~GG~~~---~~~~~---~i~ 222 (507)
||.++.. ...++++.||+.++.|......... ++++..++++++ .+++||++||... ...++ .++
T Consensus 356 Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~ 435 (656)
T 1k3i_A 356 GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT 435 (656)
T ss_dssp ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE
T ss_pred ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE
Confidence 9986431 2367899999999998765432111 223455565553 3678999999642 23445 788
Q ss_pred EEECCCCcEEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCC------CCCcceEEEEEcCcCeeEEeccCCCCCCCCC
Q 010571 223 VLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDN------NNGCQETIVLNMTKLAWSILTSVKGRNPLAS 295 (507)
Q Consensus 223 ~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~------~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~ 295 (507)
+||+.++.|..+. .+.+|.+|..|+++++ +++|||+||.+. ....+++++||+.+++|+.++.+ |.+|
T Consensus 436 ~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~----~~~R 510 (656)
T 1k3i_A 436 LGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN----SIVR 510 (656)
T ss_dssp CCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC----SSCC
T ss_pred cCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC----CCcc
Confidence 9999999999874 2578999999999888 999999999653 23367899999999999998766 4566
Q ss_pred CCCceEEEEEcCceEEEEEcccC-CC---cCCeEEEEEC
Q 010571 296 EGLSVCSAIIEGEHHLVAFGGYN-GK---YNNEVFVMRL 330 (507)
Q Consensus 296 ~~~~~~~~~~~~~~~l~v~GG~~-~~---~~~~v~~~~~ 330 (507)
.+|+.+. +..++.|||+||.. +. ..-++..|.+
T Consensus 511 ~~hs~a~--ll~dg~v~v~GG~~~~~~~~~~~~~e~~~P 547 (656)
T 1k3i_A 511 VYHSISL--LLPDGRVFNGGGGLCGDCTTNHFDAQIFTP 547 (656)
T ss_dssp CTTEEEE--ECTTSCEEEEECCCCTTCSCCCCEEEEEEC
T ss_pred ccccHhh--cCCCcEEEecCCCCCCCCCCCeeEEEEEeC
Confidence 6776443 32233799999953 21 2345666665
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.65 E-value=6.9e-05 Score=71.94 Aligned_cols=272 Identities=8% Similarity=-0.066 Sum_probs=155.2
Q ss_pred CCCeEeeCCCCCeEEeccC--CCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCcee-EeeeccccccCcc
Q 010571 3 SGSWHLELPYDLWVTLPVS--GARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWS-NLRLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~-~~~~~~~~~~~~~ 79 (507)
+++-+||+.+.++..-... ...+.....+.++..++.+|+... ..+.+.++|+.+++-. .++..
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~-----~~~~v~viD~~t~~~~~~i~~~-------- 83 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN-----NSHVIFAIDINTFKEVGRITGF-------- 83 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG-----GGTEEEEEETTTCCEEEEEECC--------
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc-----CCCEEEEEECcccEEEEEcCCC--------
Confidence 4566899998887642100 012344555677778999999875 2357999999988763 33311
Q ss_pred ccCCccCCCCCccceeeEE-ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCC-cccceEEEECCEEEEE
Q 010571 80 EDSGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVA-RGGHSVTLVGSRLIIF 157 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~-r~~~~~~~~~~~l~~~ 157 (507)
..-+.++. .++++|+.... ...+.++|+.+++-......+..... ..-..++..++++|+.
T Consensus 84 -----------~~p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~ 146 (328)
T 3dsm_A 84 -----------TSPRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVN 146 (328)
T ss_dssp -----------SSEEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEE
T ss_pred -----------CCCcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEE
Confidence 11233333 68899998642 34699999999876543222221100 0112344478899987
Q ss_pred cCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcC-----CCcEEEEECCCCcEE
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIF-----FNDLHVLDLQTNEWS 232 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~-----~~~i~~~d~~~~~W~ 232 (507)
.-. ..+.+.++|+.+++....-..+..| +.++...++++|+......... .+.++++|+.+++..
T Consensus 147 ~~~-----~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 147 CWS-----YQNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp ECT-----TCCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred cCC-----CCCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 421 1347999999998765543323222 3445556677777653221111 367999999988765
Q ss_pred eeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEc-Cce
Q 010571 233 QPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GEH 309 (507)
Q Consensus 233 ~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~-~~~ 309 (507)
..- ..+.......++.- ++.+|+..+ .++++|+.+.+.......+ ..+.....+.++ .+.
T Consensus 217 ~~~---~~~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~~~~------~~~~~p~gi~vdp~~g 279 (328)
T 3dsm_A 217 KQF---KFKLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRPFLE------FRDTKYYGLTVNPNNG 279 (328)
T ss_dssp EEE---ECCTTCCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSCSBC------CCSSCEEEEEECTTTC
T ss_pred EEE---ecCCCCCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeeeeec------CCCCceEEEEEcCCCC
Confidence 421 12222222233333 356777643 6889999887642211111 012233334454 366
Q ss_pred EEEEEcccCCCcCCeEEEEECC
Q 010571 310 HLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 310 ~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
.|||....+-.....|++||+.
T Consensus 280 ~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 280 EVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CEEEEECTTSSSEEEEEEECTT
T ss_pred eEEEEcccccccCCEEEEECCC
Confidence 8888763221235679999986
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.30 E-value=0.00042 Score=62.56 Aligned_cols=209 Identities=15% Similarity=0.013 Sum_probs=131.2
Q ss_pred CCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCcc
Q 010571 88 LPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLL 167 (507)
Q Consensus 88 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~ 167 (507)
++.-+-+.+...++.||+-.|.... +.+..+|+.+++=..-. ++|....+..++..+++||+.... .
T Consensus 18 d~~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~~ly~ltw~------~ 84 (243)
T 3mbr_X 18 DTTAFTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRDRLIQLTWR------N 84 (243)
T ss_dssp CTTCCEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESS------S
T ss_pred CCccccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCCEEEEEEee------C
Confidence 3345556777789999999886543 35999999999766554 556666667788889999998653 4
Q ss_pred CcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-eeecCCCCCCCcc
Q 010571 168 NDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAG 246 (507)
Q Consensus 168 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~ 246 (507)
+.+++||+.+.+-..--+ .+..+.+++. .++.||+.-| .+.++.+|+.+..-.. +.+ +..+.+...
T Consensus 85 ~~v~v~D~~tl~~~~ti~-----~~~~Gwglt~-dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V-~~~g~~~~~ 151 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFR-----YPGEGWALTS-DDSHLYMSDG------TAVIRKLDPDTLQQVGSIKV-TAGGRPLDN 151 (243)
T ss_dssp SEEEEEETTTTEEEEEEE-----CSSCCCEEEE-CSSCEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCC
T ss_pred CEEEEEECCcCcEEEEEe-----CCCCceEEee-CCCEEEEECC------CCeEEEEeCCCCeEEEEEEE-ccCCccccc
Confidence 579999998876544322 2234555554 4566888765 2679999999876543 332 222222211
Q ss_pred -eEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCC------CCCCCceEEEEEcCceEEEEEcccCC
Q 010571 247 -HAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPL------ASEGLSVCSAIIEGEHHLVAFGGYNG 319 (507)
Q Consensus 247 -~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~l~v~GG~~~ 319 (507)
--+..+++++|+--- ..+++.++|+.+..-...-.+.+..|. +.....-..+..+..+.|||.|-.
T Consensus 152 lNeLe~~~G~lyanvw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~-- 224 (243)
T 3mbr_X 152 LNELEWVNGELLANVW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR-- 224 (243)
T ss_dssp EEEEEEETTEEEEEET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT--
T ss_pred ceeeEEeCCEEEEEEC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC--
Confidence 134456888885432 234799999999875443333321111 111222334444556789998753
Q ss_pred CcCCeEEEEECC
Q 010571 320 KYNNEVFVMRLK 331 (507)
Q Consensus 320 ~~~~~v~~~~~~ 331 (507)
...+|...+.
T Consensus 225 --wp~~~~v~~~ 234 (243)
T 3mbr_X 225 --WPMLYEIRLT 234 (243)
T ss_dssp --CSEEEEEEEC
T ss_pred --CCcEEEEEEe
Confidence 5677776663
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.25 E-value=0.0038 Score=59.63 Aligned_cols=234 Identities=9% Similarity=0.007 Sum_probs=133.7
Q ss_pred CCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEE
Q 010571 52 LSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 131 (507)
Q Consensus 52 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~ 131 (507)
.+.+..||+.|+++...-.... ...+.+...+.++..++++|+.... .+.+.++|+.+++-..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~-----------n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~ 78 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRA-----------NGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVG 78 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHH-----------HSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCEEhhhhHhhh-----------cCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEE
Confidence 4679999999998754221100 0112234446677789999998752 3469999999987633
Q ss_pred eecCCCCCCCcccceEEE-ECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC-CCCCceEEEEcCcEEEEE
Q 010571 132 METSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA-PRYDHSAALHANRYLIVF 209 (507)
Q Consensus 132 ~~~~g~~p~~r~~~~~~~-~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~-~r~~~~~~~~~~~~l~i~ 209 (507)
.-+ ....+ ..++. -++++|+.... .+.+.++|+.+.+-...-..+.... ...-+.++. .++++|+.
T Consensus 79 ~i~--~~~~p---~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~ 146 (328)
T 3dsm_A 79 RIT--GFTSP---RYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVN 146 (328)
T ss_dssp EEE--CCSSE---EEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEE
T ss_pred EcC--CCCCC---cEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEE
Confidence 221 12222 23333 57799887642 3579999999987653322222100 001223444 57778887
Q ss_pred eCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEE-ECCEEEEEeccCCCCC-----cceEEEEEcCcCeeEE
Q 010571 210 GGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT-IDENWYIVGGGDNNNG-----CQETIVLNMTKLAWSI 283 (507)
Q Consensus 210 GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~-----~~d~~~~d~~~~~W~~ 283 (507)
.-. ..+.+.++|+.+++....-..+..| +.++. -++++|+......... .+.++++|+.+.+...
T Consensus 147 ~~~----~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 147 CWS----YQNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp ECT----TCCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred cCC----CCCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 521 1367999999998765422112222 22222 2578877754321111 2579999999887654
Q ss_pred eccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCCCC
Q 010571 284 LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 336 (507)
Q Consensus 284 ~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~w~ 336 (507)
...++.. ......++.+++..||+..+ .++.+|+.+....
T Consensus 218 ~~~~~~g------~~p~~la~~~d~~~lyv~~~-------~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 218 QFKFKLG------DWPSEVQLNGTRDTLYWINN-------DIWRMPVEADRVP 257 (328)
T ss_dssp EEECCTT------CCCEEEEECTTSCEEEEESS-------SEEEEETTCSSCC
T ss_pred EEecCCC------CCceeEEEecCCCEEEEEcc-------EEEEEECCCCcee
Confidence 3222210 11223334444678888654 7999999776653
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.23 E-value=0.0007 Score=61.11 Aligned_cols=163 Identities=17% Similarity=0.104 Sum_probs=106.4
Q ss_pred cccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEc
Q 010571 28 RYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILG 107 (507)
Q Consensus 28 r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~G 107 (507)
-+-+++...++.||+-.|..+ .+.+.++|+.+++-...-..+ ..-++.+++..+++||+..
T Consensus 21 ~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~----------------~~~fgeGi~~~~~~ly~lt 81 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEVP----------------PPYFGAGIVAWRDRLIQLT 81 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEECC----------------TTCCEEEEEEETTEEEEEE
T ss_pred cccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeCC----------------CCcceeEEEEeCCEEEEEE
Confidence 344577778999999998543 367899999999765544332 2446678888899999985
Q ss_pred ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCC
Q 010571 108 GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ 187 (507)
Q Consensus 108 G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g 187 (507)
.. .+.+++||+.|.+-..-- |.+..+.+++.-++.+|+.-| .+.++.+|+.|.+-..--..+
T Consensus 82 w~------~~~v~v~D~~tl~~~~ti-----~~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 82 WR------NHEGFVYDLATLTPRARF-----RYPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp SS------SSEEEEEETTTTEEEEEE-----ECSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECE
T ss_pred ee------CCEEEEEECCcCcEEEEE-----eCCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEc
Confidence 32 446999999988654332 222356667766778888754 347999999997654332222
Q ss_pred CCCCCCCCc-eEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 188 TPPAPRYDH-SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 188 ~~p~~r~~~-~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
..+.+...- -+..+ +++||+--- ..|+|.+.|+.++.-..
T Consensus 144 ~~g~~~~~lNeLe~~-~G~lyanvw-----~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV-NGELLANVW-----LTSRIARIDPASGKVVA 184 (243)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEET-----TTTEEEEECTTTCBEEE
T ss_pred cCCcccccceeeEEe-CCEEEEEEC-----CCCeEEEEECCCCCEEE
Confidence 222222221 23333 666775332 24789999999987443
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.96 E-value=0.0028 Score=57.71 Aligned_cols=204 Identities=10% Similarity=-0.014 Sum_probs=123.3
Q ss_pred cceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEE
Q 010571 92 SDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVH 171 (507)
Q Consensus 92 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~ 171 (507)
+...+...++.||+-.|... .+.+.++|+.|++=..-. +++....+..++..+++||+.... .+.++
T Consensus 44 ftqGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~---~l~~~~FgeGit~~g~~ly~ltw~------~~~v~ 110 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQI---ELGKRYFGEGISDWKDKIVGLTWK------NGLGF 110 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESS------SSEEE
T ss_pred ccceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEE---ecCCccceeEEEEeCCEEEEEEee------CCEEE
Confidence 34555556899999988654 345999999999765544 445444556678889999998653 45799
Q ss_pred EEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-eeecC-CCCCCCcceEE
Q 010571 172 FLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKG-DLVTGRAGHAG 249 (507)
Q Consensus 172 ~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~-~~p~~r~~~~~ 249 (507)
+||+.+.+-..--. .+-.+.+++. .++.||+.-| .+.++.+|+.+..-.. +.+.. ..|...-. -+
T Consensus 111 v~D~~t~~~~~ti~-----~~~eG~glt~-dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN-EL 177 (262)
T 3nol_A 111 VWNIRNLRQVRSFN-----YDGEGWGLTH-NDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELN-EL 177 (262)
T ss_dssp EEETTTCCEEEEEE-----CSSCCCCEEE-CSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEE-EE
T ss_pred EEECccCcEEEEEE-----CCCCceEEec-CCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccc-ee
Confidence 99999877543321 1224445554 4566888654 2679999999876443 33211 11111111 23
Q ss_pred EEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCC-----CCCCCceEEEEEcCceEEEEEcccCCCcCCe
Q 010571 250 ITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPL-----ASEGLSVCSAIIEGEHHLVAFGGYNGKYNNE 324 (507)
Q Consensus 250 ~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~-----~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~ 324 (507)
...+++||+--- ..+++.++|+.+..-...-.+++..|. +.....-..+..+..+.|||.|-. ...
T Consensus 178 e~~~G~lyan~w-----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~----Wp~ 248 (262)
T 3nol_A 178 EWVDGEIFANVW-----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL----WPK 248 (262)
T ss_dssp EEETTEEEEEET-----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT----CSE
T ss_pred EEECCEEEEEEc-----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC----CCc
Confidence 445888885421 234799999999875544344322111 111222334445556789998853 566
Q ss_pred EEEEEC
Q 010571 325 VFVMRL 330 (507)
Q Consensus 325 v~~~~~ 330 (507)
+|...+
T Consensus 249 ~~ev~~ 254 (262)
T 3nol_A 249 VFEITL 254 (262)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 666554
No 24
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.93 E-value=0.0015 Score=59.46 Aligned_cols=161 Identities=13% Similarity=0.006 Sum_probs=101.6
Q ss_pred cceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEccc
Q 010571 30 KHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGH 109 (507)
Q Consensus 30 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 109 (507)
-.++...++.||+-.|..+ .+.+.++|+.|++-...-..+ +.-++..++..+++||+.-..
T Consensus 45 tqGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~----------------~~~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELG----------------KRYFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECC----------------TTCCEEEEEEETTEEEEEESS
T ss_pred cceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecC----------------CccceeEEEEeCCEEEEEEee
Confidence 3556666899999988442 256889999999765443332 234566788889999998542
Q ss_pred CCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCC
Q 010571 110 YKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP 189 (507)
Q Consensus 110 ~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~ 189 (507)
.+.+++||+.|.+-..-- +.+-.+.+++.-++.+|+.-| .+.++.+|+.|.+-..--.-+..
T Consensus 106 ------~~~v~v~D~~t~~~~~ti-----~~~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~ 167 (262)
T 3nol_A 106 ------NGLGFVWNIRNLRQVRSF-----NYDGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAH 167 (262)
T ss_dssp ------SSEEEEEETTTCCEEEEE-----ECSSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEET
T ss_pred ------CCEEEEEECccCcEEEEE-----ECCCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccC
Confidence 346999999988654332 222255566666678888654 34799999998764433211111
Q ss_pred CCCCCCc-eEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 190 PAPRYDH-SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 190 p~~r~~~-~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
..+...- -+... ++.||+-- ...++|.+.|+.++.-..
T Consensus 168 g~~~~~lNELe~~-~G~lyan~-----w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 168 GEELPELNELEWV-DGEIFANV-----WQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp TEECCCEEEEEEE-TTEEEEEE-----TTSSEEEEECTTTCBEEE
T ss_pred CccccccceeEEE-CCEEEEEE-----ccCCeEEEEECCCCcEEE
Confidence 1111111 13334 66688632 234789999999987544
No 25
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.85 E-value=0.029 Score=55.69 Aligned_cols=198 Identities=15% Similarity=0.195 Sum_probs=111.1
Q ss_pred eEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEc
Q 010571 96 MVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 96 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~ 175 (507)
++..++..++.|+.+. .+.+||+.+..-.... ........++.+++..++.|+.+ +.+.+||+
T Consensus 244 ~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~d------~~i~i~d~ 306 (445)
T 2ovr_B 244 CVQYDGRRVVSGAYDF------MVKVWDPETETCLHTL-----QGHTNRVYSLQFDGIHVVSGSLD------TSIRVWDV 306 (445)
T ss_dssp EEEECSSCEEEEETTS------CEEEEEGGGTEEEEEE-----CCCSSCEEEEEECSSEEEEEETT------SCEEEEET
T ss_pred EEEECCCEEEEEcCCC------EEEEEECCCCcEeEEe-----cCCCCceEEEEECCCEEEEEeCC------CeEEEEEC
Confidence 3444777777776532 3888888776533222 11112223344467667777653 35999999
Q ss_pred CCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCE
Q 010571 176 ETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDEN 255 (507)
Q Consensus 176 ~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~ 255 (507)
.+.+-...-. + ......+....++ +++.|+.+ ..+.+||+.++.-...- .+. ........++.+++.
T Consensus 307 ~~~~~~~~~~-~----~~~~v~~~~~~~~-~l~~~~~d-----g~i~vwd~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~ 373 (445)
T 2ovr_B 307 ETGNCIHTLT-G----HQSLTSGMELKDN-ILVSGNAD-----STVKIWDIKTGQCLQTL-QGP-NKHQSAVTCLQFNKN 373 (445)
T ss_dssp TTCCEEEEEC-C----CCSCEEEEEEETT-EEEEEETT-----SCEEEEETTTCCEEEEE-CST-TSCSSCEEEEEECSS
T ss_pred CCCCEEEEEc-C----CcccEEEEEEeCC-EEEEEeCC-----CeEEEEECCCCcEEEEE-ccC-CCCCCCEEEEEECCC
Confidence 8876443321 1 1112223334455 66666654 46889998776543321 111 112222344556777
Q ss_pred EEEEeccCCCCCcceEEEEEcCcCeeEE-eccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 256 WYIVGGGDNNNGCQETIVLNMTKLAWSI-LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 256 l~v~GG~~~~~~~~d~~~~d~~~~~W~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
+++.|+.++ .+.+||+.+..... +..... .........+.+.++..++++|+.++.....++++|...
T Consensus 374 ~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 374 FVITSSDDG-----TVKLWDLKTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEEETTS-----EEEEEETTTCCEEEEEEECTT----GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEEeCCC-----eEEEEECCCCceeeeeecccc----CCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 888877543 58899988876543 211110 111223444556666778888998887777889998864
No 26
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.83 E-value=0.0018 Score=64.18 Aligned_cols=269 Identities=10% Similarity=-0.053 Sum_probs=135.6
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
..|.+|+....+..+.. .+.+....+++.. ++.+|+.++.+ ..+.+||+.++...........
T Consensus 102 ~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~-------- 165 (433)
T 3bws_A 102 KLIALDKEGITHRFISR---FKTGFQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKY-------- 165 (433)
T ss_dssp CEEECCBTTCSEEEEEE---EECSSCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHH--------
T ss_pred EEEEECCCCCcceEEEE---EcCCCCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccc--------
Confidence 46778887776665542 2222222233333 67788777633 3599999998876543322110
Q ss_pred CccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEc
Q 010571 83 GLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFG 158 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~G 158 (507)
.........+.+ ++.+|+.|+.. ..+.+||+.+++...... .....-.+++.. +..+|+.+
T Consensus 166 -----~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 166 -----KKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVD----LTGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp -----HTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEE----CSSSSEEEEEEETTTTEEEEEE
T ss_pred -----cccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEc----CCCCCeeEEEEcCCCCEEEEEe
Confidence 001112222333 67888887643 358999998876543321 111111222332 34677766
Q ss_pred CcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCc---CCCcEEEEECCCCcEEeee
Q 010571 159 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---FFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 159 G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~---~~~~i~~~d~~~~~W~~~~ 235 (507)
+.+ +.+.+||+.+++...... ......+++...++..+++++..... .-..+.+||+.+.......
T Consensus 231 ~~~------~~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 231 WIS------EDISVIDRKTKLEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp TTT------TEEEEEETTTTEEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred cCC------CcEEEEECCCCcEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec
Confidence 532 369999998876644321 11112333343454344444432221 1246899999887654421
Q ss_pred ecCCCCCCCcceEEEEE--CC-EEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEE
Q 010571 236 IKGDLVTGRAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLV 312 (507)
Q Consensus 236 ~~~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~ 312 (507)
.. +. ....+.+ ++ .+|+.++.+ ..+.+||+.+..-....... .........+++..|+
T Consensus 300 ~~-----~~-~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~--------~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 300 GP-----PG-NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSIPVF--------DKPNTIALSPDGKYLY 360 (433)
T ss_dssp EE-----EE-CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEEECS--------SSEEEEEECTTSSEEE
T ss_pred cC-----CC-CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEecCC--------CCCCeEEEcCCCCEEE
Confidence 10 11 1122333 33 577766533 25889998876543321111 1112233334444555
Q ss_pred EEcccCC----------CcCCeEEEEECCCC
Q 010571 313 AFGGYNG----------KYNNEVFVMRLKPR 333 (507)
Q Consensus 313 v~GG~~~----------~~~~~v~~~~~~~~ 333 (507)
+.+...+ .....++.+|+.+.
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred EEecCCCccccccccccccceEEEEEECCCC
Confidence 5443221 11347999998654
No 27
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.83 E-value=0.013 Score=53.81 Aligned_cols=206 Identities=14% Similarity=-0.021 Sum_probs=120.5
Q ss_pred eeeEEEC-CEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEE
Q 010571 94 HCMVKWG-TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 94 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~ 172 (507)
+.++..+ +.||+..|... .+.+.++|+.+++=..-. +++....+..++..++.||+.... .+.+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i---~l~~~~fgeGi~~~g~~lyv~t~~------~~~v~v 90 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIH---KMDDSYFGEGLTLLNEKLYQVVWL------KNIGFI 90 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEETT------CSEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEE---ecCCCcceEEEEEeCCEEEEEEec------CCEEEE
Confidence 5666655 89999877432 346999999999755443 233333445667778899998642 457999
Q ss_pred EEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-eeecCCCCCCCc-ceEEE
Q 010571 173 LDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRA-GHAGI 250 (507)
Q Consensus 173 ~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~-~~~~~ 250 (507)
||+.+.+=..--+.+ .| .+.+++. .++.+|+..| .+.++.+|+.+..-.. +.+ +..+.+.. -..+.
T Consensus 91 iD~~t~~v~~~i~~g-~~---~g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~V-g~~~~p~~~~nele 158 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ-MK---DGWGLAT-DGKILYGSDG------TSILYEIDPHTFKLIKKHNV-KYNGHRVIRLNELE 158 (266)
T ss_dssp EETTTTEEEEEEECC-SS---SCCEEEE-CSSSEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEE
T ss_pred EECCCCcEEEEEECC-CC---CeEEEEE-CCCEEEEECC------CCeEEEEECCCCcEEEEEEE-CCCCcccccceeEE
Confidence 999887543322222 12 2333333 4566888654 3789999999876433 332 22222211 11333
Q ss_pred EECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCC------CCCCCCCCceEEEEEcCceEEEEEcccCCCcCCe
Q 010571 251 TIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGR------NPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNE 324 (507)
Q Consensus 251 ~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~------~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~ 324 (507)
..++.+|+--. ..+++.++|+.+.+-...-.+++. ...+........+..++.+.+||.|+. .+.
T Consensus 159 ~~dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~----~~~ 229 (266)
T 2iwa_A 159 YINGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL----WPK 229 (266)
T ss_dssp EETTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT----CSE
T ss_pred EECCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC----CCe
Confidence 44788886532 234799999998864332222110 000111122344455566789998875 467
Q ss_pred EEEEECCCC
Q 010571 325 VFVMRLKPR 333 (507)
Q Consensus 325 v~~~~~~~~ 333 (507)
++..++...
T Consensus 230 v~~i~l~~~ 238 (266)
T 2iwa_A 230 LFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 888887543
No 28
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.82 E-value=0.0022 Score=58.43 Aligned_cols=158 Identities=9% Similarity=-0.004 Sum_probs=101.3
Q ss_pred cceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEccc
Q 010571 30 KHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGH 109 (507)
Q Consensus 30 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 109 (507)
.+++...++.||+-.|..+. +.++|+.|++-...- .+ ..-++..++..+++||+....
T Consensus 57 tqGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~-l~----------------~~~FgeGit~~g~~Ly~ltw~ 114 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWME-RL----------------GNIFAEGLASDGERLYQLTWT 114 (268)
T ss_dssp EEEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEE-EC----------------TTCCEEEEEECSSCEEEEESS
T ss_pred cceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE-CC----------------CCcceeEEEEeCCEEEEEEcc
Confidence 35666678999999985432 889999998754433 22 134556688889999998542
Q ss_pred CCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCC
Q 010571 110 YKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP 189 (507)
Q Consensus 110 ~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~ 189 (507)
.+.+++||+.|.+-..-- +.+..+.+++.-++.||+.-| .+.++.+|+.|.+-..--..+..
T Consensus 115 ------~~~v~V~D~~Tl~~~~ti-----~~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 115 ------EGLLFTWSGMPPQRERTT-----RYSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp ------SCEEEEEETTTTEEEEEE-----ECSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEET
T ss_pred ------CCEEEEEECCcCcEEEEE-----eCCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCC
Confidence 346999999988654332 222345677777889999765 34799999999765433221122
Q ss_pred CCCCCCc-eEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 190 PAPRYDH-SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 190 p~~r~~~-~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
+.+...- -+... ++.||+-- ...++|.+.|+.++.-..
T Consensus 177 g~~v~~lNeLe~~-dG~lyanv-----w~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANI-----WHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEE-----TTCSEEEEECTTTCBEEE
T ss_pred CcccccccccEEe-CCEEEEEE-----CCCCeEEEEeCCCCcEEE
Confidence 2222111 12333 66677522 224789999999987443
No 29
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.79 E-value=0.021 Score=54.38 Aligned_cols=231 Identities=10% Similarity=0.009 Sum_probs=115.3
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
.++.+|+.+.+-......+ ...++++.. ++.+|+.++.. ..+.+||+.++.-...-..+.. ..
T Consensus 70 ~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-----~~ 134 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHND-----LKPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDR-----KR 134 (353)
T ss_dssp EEEEECTTTCCEEEEEEES-----SCCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCC-----CC
T ss_pred cEEEEcCCCCeEEEEEecC-----CCcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCC-----cc
Confidence 4678888877654332111 112334333 45688776632 4789999998875332222110 00
Q ss_pred CCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEE
Q 010571 82 SGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~ 157 (507)
.....+..-+.++.. ++.+|+.+... ...+++||+.+++-..... . ....-..++.. ++.+|+.
T Consensus 135 ---~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 135 ---TEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQ---N-TGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp ---CSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEEC---C-CCTTCCCCEEETTTTEEEEE
T ss_pred ---ccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEec---C-CCCccceEEECCCCCEEEEE
Confidence 000001111223332 45677766321 2359999999886544331 1 11111222332 3466665
Q ss_pred cCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeee
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
.. .+.+..||+.+.+-......+..........++... ++.+|+.+.. .+.+++||+.++.....-.
T Consensus 203 ~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 203 NA-------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp CT-------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEE
T ss_pred cC-------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEE
Confidence 43 246889999887654433221111111222234443 4456665432 2679999998877554321
Q ss_pred cCCCCCCCcceEEEEECC-EEEEEeccCCCCCcceEEEEEcCcCeeEE
Q 010571 237 KGDLVTGRAGHAGITIDE-NWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~~~-~l~v~GG~~~~~~~~d~~~~d~~~~~W~~ 283 (507)
.+.+ .+.+..-++ .+|+.+..+ +.+.++|+.+.....
T Consensus 271 ---~~~~--~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 271 ---APES--LAVLFNPARNEAYVTHRQA-----GKVSVIDAKSYKVVK 308 (353)
T ss_dssp ---CSSC--CCEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred ---cCCC--ceEEECCCCCEEEEEECCC-----CeEEEEECCCCeEEE
Confidence 1222 112222233 477665422 368899998876544
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.78 E-value=0.032 Score=53.96 Aligned_cols=217 Identities=14% Similarity=0.159 Sum_probs=118.4
Q ss_pred CCeEeeCCCC--CeEEeccCCCC----CCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccc
Q 010571 4 GSWHLELPYD--LWVTLPVSGAR----PSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELD 75 (507)
Q Consensus 4 ~~~~~d~~~~--~W~~~~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~ 75 (507)
.+++||+.+. .|..-...... .......+.++.++.||+... ...++.||+.+++ |..-..
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l~a~d~~tG~~~W~~~~~----- 132 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQVYALNTSDGTVAWQTKVA----- 132 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEEEEEETTTCCEEEEEECS-----
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEEEEEECCCCCEEEEEeCC-----
Confidence 5688998644 57644321100 022333445566888888643 2469999999875 654221
Q ss_pred cCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCcccceEEEECCE
Q 010571 76 ADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLVGSR 153 (507)
Q Consensus 76 ~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~ 153 (507)
.....+.+..++.||+..+ ...++.||+.+++ |+..... .....+...+.+..++.
T Consensus 133 --------------~~~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~~~ 190 (376)
T 3q7m_A 133 --------------GEALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDM-PSLSLRGESAPTTAFGA 190 (376)
T ss_dssp --------------SCCCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC------CCCCCCEEETTE
T ss_pred --------------CceEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCC-CceeecCCCCcEEECCE
Confidence 1112233455888887543 2359999998875 8765421 11111222334455777
Q ss_pred EEEEcCcCCCCCccCcEEEEEcCCCc--EEEeecCCCCCCCC-------CCceEEEEcCcEEEEEeCCCCCcCCCcEEEE
Q 010571 154 LIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPR-------YDHSAALHANRYLIVFGGCSHSIFFNDLHVL 224 (507)
Q Consensus 154 l~~~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r-------~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~ 224 (507)
+|+ |.. ...++.||+.+++ |..... .|... ...+..++.++.+|+.+ .+ ..++.+
T Consensus 191 v~~-g~~------~g~l~~~d~~tG~~~w~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~-----g~l~~~ 254 (376)
T 3q7m_A 191 AVV-GGD------NGRVSAVLMEQGQMIWQQRIS---QATGSTEIDRLSDVDTTPVVVNGVVFALA-YN-----GNLTAL 254 (376)
T ss_dssp EEE-CCT------TTEEEEEETTTCCEEEEEECC---C-----------CCCCCCEEETTEEEEEC-TT-----SCEEEE
T ss_pred EEE-EcC------CCEEEEEECCCCcEEEEEecc---cCCCCcccccccccCCCcEEECCEEEEEe-cC-----cEEEEE
Confidence 666 322 2369999997764 765432 11111 01122233466566643 22 468999
Q ss_pred ECCCCc--EEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCe--eEE
Q 010571 225 DLQTNE--WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA--WSI 283 (507)
Q Consensus 225 d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~--W~~ 283 (507)
|+.++. |+.. .+ ...+.++.++.+|+... + ..++.||+.+.. |+.
T Consensus 255 d~~tG~~~w~~~-----~~---~~~~~~~~~~~l~~~~~-~-----g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 255 DLRSGQIMWKRE-----LG---SVNDFIVDGNRIYLVDQ-N-----DRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp ETTTCCEEEEEC-----CC---CEEEEEEETTEEEEEET-T-----CCEEEEETTTCCEEEEE
T ss_pred ECCCCcEEeecc-----CC---CCCCceEECCEEEEEcC-C-----CeEEEEECCCCcEEEee
Confidence 998764 7652 11 12234555778887643 1 258899987764 764
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.73 E-value=0.0086 Score=58.19 Aligned_cols=256 Identities=13% Similarity=0.068 Sum_probs=133.6
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcc
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~ 79 (507)
|..++++|+.+.+-...... . ..-++++.. +..||+.|+.+ ..+.++|+.+++....-...
T Consensus 11 d~~v~v~d~~~~~~~~~~~~---~--~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~------- 73 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPV---G--SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIATVPAG------- 73 (391)
T ss_dssp TTEEEEEETTTTEEEEEEEC---S--SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEEEECS-------
T ss_pred CCEEEEEECCCCeEEEEeec---C--CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEEEECC-------
Confidence 34567888887765443311 1 112333333 44677776532 46899999988754433221
Q ss_pred ccCCccCCCCCccceeeEEE---CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEE
Q 010571 80 EDSGLLEVLPPMSDHCMVKW---GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRL 154 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l 154 (507)
. ....+.+ ++.||+.|.. ...+.+||+.+++....... .....+++.. +..+
T Consensus 74 ----------~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 74 ----------S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKT-----GKSPLGLALSPDGKKL 130 (391)
T ss_dssp ----------S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSSEE
T ss_pred ----------C--CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeC-----CCCcceEEECCCCCEE
Confidence 1 1222223 4456666542 23599999999876544321 1111223332 3367
Q ss_pred EEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 155 IIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 155 ~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
|+.++. .+.+.++|+.+.+.......+.. ...++...+ +.+|+.++.+ +.+++||+.++....
T Consensus 131 ~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 131 YVTNNG------DKTVSVINTVTKAVINTVSVGRS-----PKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVID 194 (391)
T ss_dssp EEEETT------TTEEEEEETTTTEEEEEEECCSS-----EEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred EEEeCC------CCEEEEEECCCCcEEEEEecCCC-----cceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEE
Confidence 777653 24699999998876655432221 123333334 4566666543 469999998876554
Q ss_pred eeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEE
Q 010571 234 PEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHL 311 (507)
Q Consensus 234 ~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l 311 (507)
... ... ....+.+ ++..+++++... ....+.+||+.+..-... ++.. .........+++..|
T Consensus 195 ~~~-----~~~-~~~~~~~~~~g~~l~~~~~~~--~~~~v~~~d~~~~~~~~~--~~~~------~~~~~~~~s~dg~~l 258 (391)
T 1l0q_A 195 TVK-----VEA-APSGIAVNPEGTKAYVTNVDK--YFNTVSMIDTGTNKITAR--IPVG------PDPAGIAVTPDGKKV 258 (391)
T ss_dssp EEE-----CSS-EEEEEEECTTSSEEEEEEECS--SCCEEEEEETTTTEEEEE--EECC------SSEEEEEECTTSSEE
T ss_pred EEe-----cCC-CccceEECCCCCEEEEEecCc--CCCcEEEEECCCCeEEEE--EecC------CCccEEEEccCCCEE
Confidence 321 111 1122333 344444444211 123688999887754322 2111 111223334445567
Q ss_pred EEEcccCCCcCCeEEEEECCCC
Q 010571 312 VAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 312 ~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
++.++.+ +.+.++|+.+.
T Consensus 259 ~~s~~~d----~~v~v~d~~~~ 276 (391)
T 1l0q_A 259 YVALSFX----NTVSVIDTATN 276 (391)
T ss_dssp EEEETTT----TEEEEEETTTT
T ss_pred EEEcCCC----CEEEEEECCCC
Confidence 7766543 56777777543
No 32
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.72 E-value=0.028 Score=51.55 Aligned_cols=202 Identities=11% Similarity=-0.060 Sum_probs=117.1
Q ss_pred cceEEEEC-CEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcc
Q 010571 30 KHAAAVFD-QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGG 108 (507)
Q Consensus 30 ~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG 108 (507)
-|++++.+ +.||+..|.. ..+.+.++|+.|++-...-..+ ....+..++..+++||+..-
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~----------------~~~fgeGi~~~g~~lyv~t~ 83 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLY---GRSSVRQVALQTGKVENIHKMD----------------DSYFGEGLTLLNEKLYQVVW 83 (266)
T ss_dssp EEEEEECSTTEEEEEECST---TTCEEEEEETTTCCEEEEEECC----------------TTCCEEEEEEETTEEEEEET
T ss_pred cccEEEeCCCeEEEECCCC---CCCEEEEEECCCCCEEEEEecC----------------CCcceEEEEEeCCEEEEEEe
Confidence 46777766 8999987732 2367999999998855433222 13355677778999999853
Q ss_pred cCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCC
Q 010571 109 HYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT 188 (507)
Q Consensus 109 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~ 188 (507)
. .+.+.+||+.+.+=..--+.+ +| .+..++.-++++|+.-| .+.++.+|+.+.+-..--..+.
T Consensus 84 ~------~~~v~viD~~t~~v~~~i~~g-~~---~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 84 L------KNIGFIYDRRTLSNIKNFTHQ-MK---DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp T------CSEEEEEETTTTEEEEEEECC-SS---SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEE
T ss_pred c------CCEEEEEECCCCcEEEEEECC-CC---CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECC
Confidence 2 446999999987543322222 22 33445555668888653 4579999999876443322222
Q ss_pred CCCCCC-CceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-eeecCCC-------CCCCcceEEEEE---CCEE
Q 010571 189 PPAPRY-DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDL-------VTGRAGHAGITI---DENW 256 (507)
Q Consensus 189 ~p~~r~-~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~-------p~~r~~~~~~~~---~~~l 256 (507)
.+.+.. -..+... ++.+|+--. ..++|.+.|+.+++-.. +...+.. .........+.+ ++++
T Consensus 147 ~~~p~~~~nele~~-dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l 220 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI 220 (266)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred CCcccccceeEEEE-CCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence 222221 1233444 667886533 24789999999986433 2211100 011112233333 3578
Q ss_pred EEEeccCCCCCcceEEEEEcCc
Q 010571 257 YIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 257 ~v~GG~~~~~~~~d~~~~d~~~ 278 (507)
||.|+.. +.++..++..
T Consensus 221 fVTgk~~-----~~v~~i~l~~ 237 (266)
T 2iwa_A 221 FVTGKLW-----PKLFEIKLHL 237 (266)
T ss_dssp EEEETTC-----SEEEEEEEEE
T ss_pred EEECCCC-----CeEEEEEEec
Confidence 8888743 3566666543
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.62 E-value=0.045 Score=51.21 Aligned_cols=190 Identities=15% Similarity=0.167 Sum_probs=97.2
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||..++.-...-.. ......++.+ ++.+++.|+.+.
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~s~~~d~--- 129 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKTLKG------------------HSNYVFCCNFNPQSNLIVSGSFDE--- 129 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEEC------------------CSSCEEEEEECSSSSEEEEEETTS---
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEcC------------------CCCCEEEEEEcCCCCEEEEEeCCC---
Confidence 45566666633 4588899887753322111 1111122222 456666776532
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
.+.+||+.+++-...- +.......++.+ ++.+++.|+.+ ..+.+||+.+.+......... .
T Consensus 130 ---~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~---~ 192 (312)
T 4ery_A 130 ---SVRIWDVKTGKCLKTL-----PAHSDPVSAVHFNRDGSLIVSSSYD------GLCRIWDTASGQCLKTLIDDD---N 192 (312)
T ss_dssp ---CEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCSS---C
T ss_pred ---cEEEEECCCCEEEEEe-----cCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCceeeEEeccC---C
Confidence 3889999887643322 111111222333 45667777653 358999998876544321111 1
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEE-ECCEEEEEeccCCCCCcceE
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT-IDENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~d~ 271 (507)
.....+....++..++.|+.+ +.+.+||+.+..-...- .+............. .++.+++.|+.++ .+
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-----~i 261 (312)
T 4ery_A 193 PPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSEDN-----LV 261 (312)
T ss_dssp CCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEECCTTS-----CE
T ss_pred CceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEECCCC-----EE
Confidence 111123333455566666654 46889999877543321 121111112222222 2456677766443 47
Q ss_pred EEEEcCcCe
Q 010571 272 IVLNMTKLA 280 (507)
Q Consensus 272 ~~~d~~~~~ 280 (507)
.++|+.+..
T Consensus 262 ~vwd~~~~~ 270 (312)
T 4ery_A 262 YIWNLQTKE 270 (312)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCch
Confidence 889987765
No 34
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.57 E-value=0.037 Score=58.64 Aligned_cols=196 Identities=12% Similarity=-0.020 Sum_probs=97.8
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCC-cEEEeecCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~-~W~~~~~~g~~p~~ 192 (507)
...++++|+.++.-..+.. ..........+.+ +++.++++..+... ....++.+|+.++ ....+.........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQT---GEPKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCC---CSCTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCceEeecc---CCCCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 4579999999987655531 1111112222333 44444444333221 2457999999988 66665421110000
Q ss_pred CCCceEEEEc--CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE-EEEEeccCCCCC
Q 010571 193 RYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN-WYIVGGGDNNNG 267 (507)
Q Consensus 193 r~~~~~~~~~--~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~ 267 (507)
.....++... ++.+++.+..++ ...+|.++........+.. + .......+.+ +++ |++.+. .....
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~-~----~~~v~~~~~~spdg~~l~~~~~-~~~~~ 380 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTK-G----EWEVTNFAGFDPKGTRLYFEST-EASPL 380 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCC-S----SSCEEEEEEECTTSSEEEEEES-SSCTT
T ss_pred CccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCC-C----CeEEEeeeEEcCCCCEEEEEec-CCCCc
Confidence 0012334445 666655554432 3678888877766666521 1 1111122334 344 544443 32222
Q ss_pred cceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 268 CQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 268 ~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
...+|.+|..+.....+... . ....+.+..+...+++...+......++.+|+....
T Consensus 381 ~~~l~~~d~~~~~~~~l~~~---------~-~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 381 ERHFYCIDIKGGKTKDLTPE---------S-GMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CBEEEEEETTCCCCEESCCS---------S-SEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eEEEEEEEcCCCCceeccCC---------C-ceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 35789999888776655421 1 122233333333445554444445678888876543
No 35
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.55 E-value=0.032 Score=54.93 Aligned_cols=266 Identities=13% Similarity=0.036 Sum_probs=128.3
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
.+++||+.+.........+....+...-..+.+ ++.+|+.|+. ...+.+||+.+++....-...
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~-----d~~v~~~d~~~~~~~~~~~~~--------- 210 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ-----ANAVHVFDLKTLAYKATVDLT--------- 210 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG-----GTEEEEEETTTCCEEEEEECS---------
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC-----CCEEEEEECCCceEEEEEcCC---------
Confidence 377888887776654311000011111111222 6778887763 246899999886543322111
Q ss_pred CCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEE
Q 010571 82 SGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~ 157 (507)
...-.+++.. ++.+|+.++.. ..+.+||+.+++..... +.... ...+.+ ++..+++
T Consensus 211 --------~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~-----~~~~~-~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 211 --------GKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKT-----DKIGL-PRGLLLSKDGKELYI 270 (433)
T ss_dssp --------SSSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEEC-----CCCSE-EEEEEECTTSSEEEE
T ss_pred --------CCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEe-----cCCCC-ceEEEEcCCCCEEEE
Confidence 1111222222 45677766432 35999999988654432 11111 222333 3444444
Q ss_pred cCcCCCCC--ccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 158 GGEDRSRK--LLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 158 GG~~~~~~--~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
++...... ....+..||+.+.+-...... + .....++...++ .+|+.++.+ +.+.+||+.+..-...
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~---~--~~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~ 340 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIGP---P--GNKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKS 340 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEEE---E--ECEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEE
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeeccC---C--CCcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEE
Confidence 44322211 134699999988765443211 1 111123333343 577776543 4789999987664432
Q ss_pred eecCCCCCCCcceEEEEE--CCEEEEEeccCCCC----------CcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEE
Q 010571 235 EIKGDLVTGRAGHAGITI--DENWYIVGGGDNNN----------GCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCS 302 (507)
Q Consensus 235 ~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~----------~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~ 302 (507)
- +.... ...+.+ +++.+++++...+. .-..++++|+.+.......... ......
T Consensus 341 ~-----~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~--------~~~~~~ 406 (433)
T 3bws_A 341 I-----PVFDK-PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG--------NQPTGL 406 (433)
T ss_dssp E-----ECSSS-EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS--------SSEEEE
T ss_pred e-----cCCCC-CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC--------CCCceE
Confidence 1 11111 123333 34444444432210 0136899999887654432211 111222
Q ss_pred EEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 303 AIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 303 ~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
...+++..|++.+..+ ..+.+|++.
T Consensus 407 ~~s~dg~~l~~~~~~d----~~i~v~~~~ 431 (433)
T 3bws_A 407 DVSPDNRYLVISDFLD----HQIRVYRRD 431 (433)
T ss_dssp EECTTSCEEEEEETTT----TEEEEEEET
T ss_pred EEcCCCCEEEEEECCC----CeEEEEEec
Confidence 2334445555544322 467777664
No 36
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.46 E-value=0.0078 Score=64.88 Aligned_cols=224 Identities=8% Similarity=0.010 Sum_probs=124.5
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
.|.++||+.+++++.+... .++. ..-.+++.. ++.|++-.. ..+++||+.++.|........
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~-~~~~-~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~-------- 489 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELE-KNEL-LDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSN-------- 489 (781)
T ss_dssp EEEEEECSSSCEEEECCST-TTCC-CCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTT--------
T ss_pred CCEEEEcCCCCcEEEeccC-CCCC-CeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcc--------
Confidence 5788999999999887632 1111 111222222 456665321 458999999999887654321
Q ss_pred CCccCCCCCccceeeEE-ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEc
Q 010571 82 SGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFG 158 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~G 158 (507)
...+... -.+++. -++.|++.. .. .-+++||+.++++........+|... ..++.. ++.|++-.
T Consensus 490 ---~~~~~~~-i~~i~~d~~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~~~~l~~~~--i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 490 ---SQLLENF-VRSIAQDSEGRFWIGT-FG------GGVGIYTPDMQLVRKFNQYEGFCSNT--INQIYRSSKGQMWLAT 556 (781)
T ss_dssp ---SSCSCSC-EEEEEECTTCCEEEEE-SS------SCEEEECTTCCEEEEECTTTTCSCSC--EEEEEECTTSCEEEEE
T ss_pred ---cccccce-eEEEEEcCCCCEEEEE-cC------CCEEEEeCCCCeEEEccCCCCCCCCe--eEEEEECCCCCEEEEE
Confidence 0111111 122222 256677642 11 12889999999998876422232221 122222 45677643
Q ss_pred CcCCCCCccCcE-EEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeec
Q 010571 159 GEDRSRKLLNDV-HFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 159 G~~~~~~~~~~~-~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
. +.+ .+||+.+.++........+|... ..+++...++.|++.+. +-+.+||+.+..+......
T Consensus 557 ~--------~Glv~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 557 G--------EGLVCFPSARNFDYQVFQRKEGLPNTH-IRAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp T--------TEEEEESCTTTCCCEEECGGGTCSCCC-CCEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGG
T ss_pred C--------CCceEEECCCCCcEEEccccCCCCCce-EEEEEECCCCCEEEEcC-------CceEEEECCCCceEEeccc
Confidence 2 246 89999998888776543444333 24555555676777542 4589999999998886544
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEcCc
Q 010571 238 GDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~ 278 (507)
..++...+...++.. .+.-+.|||.+ -+..||+..
T Consensus 621 dGl~~~~f~~~~~~~~~~G~l~~g~~~------Gl~~f~p~~ 656 (781)
T 3v9f_A 621 NNIPQGSFISGCVTKDHNGLIYFGSIN------GLCFFNPDI 656 (781)
T ss_dssp GTCCSSCEEEEEEEECTTSCEEEEETT------EEEEECSCC
T ss_pred CCccccccccCceEECCCCEEEEECCC------ceEEEChhh
Confidence 344544433333333 33344456643 245666543
No 37
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.44 E-value=0.017 Score=54.51 Aligned_cols=267 Identities=9% Similarity=-0.039 Sum_probs=130.4
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCce-eEeeeccccccCcc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAW-SNLRLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W-~~~~~~~~~~~~~~ 79 (507)
..+..||+.+.+...... .+.... +++.. +..+|+.+... ..+++||+.++.. .......
T Consensus 20 ~~v~~~d~~~~~~~~~~~---~~~~~~--~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~------- 82 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQIT---LGYDFV--DTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEG------- 82 (331)
T ss_dssp TEEEEEETTTCCEEEEEE---CCCCEE--EEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEEC-------
T ss_pred CeEEEEeCcccceeeeEE---ccCCcc--eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeEEecccC-------
Confidence 446789999888865542 111111 33332 44577776522 3799999998875 2222211
Q ss_pred ccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CC-EEE
Q 010571 80 EDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLI 155 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~l~ 155 (507)
....++++.. ++.|| .+..... ...+.+||+.+++.......+.. .+.++.- ++ .+|
T Consensus 83 ----------~~~~~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~ 143 (331)
T 3u4y_A 83 ----------QSSMADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPYD-----AVGIAISPNGNGLI 143 (331)
T ss_dssp ----------SSCCCCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCTT-----EEEEEECTTSSCEE
T ss_pred ----------CCCccceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCCC-----ccceEECCCCCEEE
Confidence 1111212222 44566 3322211 12699999998876554322111 1233332 33 577
Q ss_pred EEcCcCCCCCccCc-EEEEEcCCCc-EEEeecCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECCCCcE-
Q 010571 156 IFGGEDRSRKLLND-VHFLDLETMT-WDAVEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNEW- 231 (507)
Q Consensus 156 ~~GG~~~~~~~~~~-~~~~d~~t~~-W~~~~~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~~~~W- 231 (507)
+.+.. .+. +..|++.... ...... ...+.......++...++ .+|+.+..+ +.+.+||+.+...
T Consensus 144 ~~~~~------~~~~i~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~~ 211 (331)
T 3u4y_A 144 LIDRS------SANTVRRFKIDADGVLFDTGQ-EFISGGTRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPENI 211 (331)
T ss_dssp EEEET------TTTEEEEEEECTTCCEEEEEE-EEECSSSSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTSC
T ss_pred EEecC------CCceEEEEEECCCCcEeecCC-ccccCCCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCccc
Confidence 66543 234 7777765422 111100 001111222344444454 466665432 5699999987764
Q ss_pred --E-eeeecCCCCCCCcceEEEEE-CCE-EEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCC---CCCCCCCceEEE
Q 010571 232 --S-QPEIKGDLVTGRAGHAGITI-DEN-WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRN---PLASEGLSVCSA 303 (507)
Q Consensus 232 --~-~~~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~---p~~~~~~~~~~~ 303 (507)
. .+.. + .....++.- +++ +|+.... .+.++++|+.+.....+...+... +.+.... ....
T Consensus 212 ~~~~~~~~-~-----~~~~~~~~spdg~~l~v~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 279 (331)
T 3u4y_A 212 TLLNAVGT-N-----NLPGTIVVSRDGSTVYVLTES-----TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGA-NQMA 279 (331)
T ss_dssp EEEEEEEC-S-----SCCCCEEECTTSSEEEEECSS-----EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTC-CCEE
T ss_pred ceeeeccC-C-----CCCceEEECCCCCEEEEEEcC-----CCEEEEEECCCCceeeecccccccccCCCCcccc-cceE
Confidence 2 2211 1 111122222 444 5555431 235889999988775554332211 1111111 1233
Q ss_pred EEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 304 IIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 304 ~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
..+++..|++.++. .+.+.++|+...
T Consensus 280 ~spdg~~l~v~~~~----~~~v~v~d~~~~ 305 (331)
T 3u4y_A 280 LNKTETKLFISANI----SRELKVFTISGK 305 (331)
T ss_dssp ECTTSSEEEEEETT----TTEEEEEETTSC
T ss_pred ECCCCCEEEEecCC----CCcEEEEEecCC
Confidence 44555677776553 356888887643
No 38
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.43 E-value=0.027 Score=54.62 Aligned_cols=225 Identities=16% Similarity=0.084 Sum_probs=118.5
Q ss_pred CEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCC
Q 010571 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSD 115 (507)
Q Consensus 38 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 115 (507)
+.+|+.|+.+ ..+.++|+.+++-...-... .. -.+++.. +..||+.|+..
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~-----------------~~-~~~~~~s~dg~~l~~~~~~d----- 53 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPVG-----------------SN-PMGAVISPDGTKVYVANAHS----- 53 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEECS-----------------SS-EEEEEECTTSSEEEEEEGGG-----
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeecC-----------------CC-cceEEECCCCCEEEEECCCC-----
Confidence 3567777633 46899999988654432211 11 1222222 34677776543
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
..+.+||+.+++...... .+. ....+.+ +..||+.|.. .+.+.+||+.+++.......+
T Consensus 54 -~~i~v~d~~~~~~~~~~~---~~~---~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~----- 115 (391)
T 1l0q_A 54 -NDVSIIDTATNNVIATVP---AGS---SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTG----- 115 (391)
T ss_dssp -TEEEEEETTTTEEEEEEE---CSS---SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECS-----
T ss_pred -CeEEEEECCCCeEEEEEE---CCC---CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCC-----
Confidence 359999999887655432 111 2222333 3356666543 246999999988765543211
Q ss_pred CCCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCcc
Q 010571 193 RYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DE-NWYIVGGGDNNNGCQ 269 (507)
Q Consensus 193 r~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~ 269 (507)
....+++...+ ..+|+.++.+ +.+++||+.+.........+. ....++.. ++ .+++.++.+ .
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~~-----~ 180 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVGR-----SPKGIAVTPDGTKVYVANFDS-----M 180 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTT-----T
T ss_pred CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecCC-----CcceEEECCCCCEEEEEeCCC-----C
Confidence 11233444344 4466666543 479999998887655322111 11222222 33 465665432 3
Q ss_pred eEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 270 ETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 270 d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
.++++|+.+.......... .........+++..|++.+.. .....++++|+...
T Consensus 181 ~v~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~g~~l~~~~~~--~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVE--------AAPSGIAVNPEGTKAYVTNVD--KYFNTVSMIDTGTN 234 (391)
T ss_dssp EEEEEETTTTEEEEEEECS--------SEEEEEEECTTSSEEEEEEEC--SSCCEEEEEETTTT
T ss_pred EEEEEECCCCeEEEEEecC--------CCccceEECCCCCEEEEEecC--cCCCcEEEEECCCC
Confidence 5889999887654432211 111222333444556555421 12456778887543
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.40 E-value=0.081 Score=51.61 Aligned_cols=263 Identities=11% Similarity=0.088 Sum_probs=129.1
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
..+++||+.+........ .+....-.+++.. ++.+++.|+.+ ..+.+||+.++.....-..
T Consensus 113 ~~v~lw~~~~~~~~~~~~---~~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~---------- 174 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAE---TDESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMAG---------- 174 (401)
T ss_dssp TEEEEEETTTCCEEEEEE---CCTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECC----------
T ss_pred CeEEEeeCCCCcEeEeee---cCCCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEecC----------
Confidence 345677877777665542 2112222222222 45566666633 4688999987754332211
Q ss_pred CCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcC
Q 010571 82 SGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGG 159 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG 159 (507)
......++..++.+++.|+.+ ..+.+||+.+..-...... . ......++.+ ++.+++.|+
T Consensus 175 --------~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~l~s~~ 236 (401)
T 4aez_A 175 --------HQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQ-G---HSSEVCGLAWRSDGLQLASGG 236 (401)
T ss_dssp --------CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE-C---CSSCEEEEEECTTSSEEEEEE
T ss_pred --------CCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEc-C---CCCCeeEEEEcCCCCEEEEEe
Confidence 122233344466677777643 3588899874332221111 1 1111222223 456777776
Q ss_pred cCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecC
Q 010571 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKG 238 (507)
Q Consensus 160 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~ 238 (507)
.+ +.+.+||+.+..-...-. .....-.+++... +..+++.||... -..+.+||+.+..-...-. .
T Consensus 237 ~d------~~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~p~~~~ll~~~~gs~---d~~i~i~d~~~~~~~~~~~-~ 302 (401)
T 4aez_A 237 ND------NVVQIWDARSSIPKFTKT----NHNAAVKAVAWCPWQSNLLATGGGTM---DKQIHFWNAATGARVNTVD-A 302 (401)
T ss_dssp TT------SCEEEEETTCSSEEEEEC----CCSSCCCEEEECTTSTTEEEEECCTT---TCEEEEEETTTCCEEEEEE-C
T ss_pred CC------CeEEEccCCCCCccEEec----CCcceEEEEEECCCCCCEEEEecCCC---CCEEEEEECCCCCEEEEEe-C
Confidence 53 359999998765433221 1111222333333 334677664211 1468999998776443211 1
Q ss_pred CCCCCCcceEEEEE--CCE-EEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEc
Q 010571 239 DLVTGRAGHAGITI--DEN-WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFG 315 (507)
Q Consensus 239 ~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~G 315 (507)
. .....+.+ ++. +++.+|... ..+.+||+.+.....+..+.... +...+....+++ .+++.|
T Consensus 303 ----~-~~v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~~~~~~h~-----~~v~~~~~s~dg-~~l~s~ 367 (401)
T 4aez_A 303 ----G-SQVTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQVDIPAHD-----TRVLYSALSPDG-RILSTA 367 (401)
T ss_dssp ----S-SCEEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEEEEEECCS-----SCCCEEEECTTS-SEEEEE
T ss_pred ----C-CcEEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeEEEecCCC-----CCEEEEEECCCC-CEEEEE
Confidence 1 11233333 344 444434332 25888898887666554332211 111222233333 455556
Q ss_pred ccCCCcCCeEEEEECCCCC
Q 010571 316 GYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 316 G~~~~~~~~v~~~~~~~~~ 334 (507)
|.+ ..+..+++....
T Consensus 368 ~~d----g~i~iw~~~~~~ 382 (401)
T 4aez_A 368 ASD----ENLKFWRVYDGD 382 (401)
T ss_dssp CTT----SEEEEEECCC--
T ss_pred eCC----CcEEEEECCCCc
Confidence 644 467788876543
No 40
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.40 E-value=0.059 Score=58.09 Aligned_cols=269 Identities=12% Similarity=0.068 Sum_probs=139.5
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCC----ccccceEEEE-CCE-EEEEcCCCCCccCCceEEEECCCCceeEeeecccccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPS----PRYKHAAAVF-DQK-LYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~----~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~ 76 (507)
.|+++||+.+..+.........+. ...-++++.. ++. |++ |.. ...+++||+.++.+........
T Consensus 377 ~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~-----~~Gl~~~d~~~~~~~~~~~~~~--- 447 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTH-----AGGLSILHRNSGQVENFNQRNS--- 447 (795)
T ss_dssp SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EET-----TTEEEEEETTTCCEEEECTTTS---
T ss_pred CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeC-----cCceeEEeCCCCcEEEeecCCC---
Confidence 488899999999988763210111 1112233333 455 555 321 2358999999998877653210
Q ss_pred CccccCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCC-CCCcccceEEEE--CC
Q 010571 77 DKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV-PVARGGHSVTLV--GS 152 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~-p~~r~~~~~~~~--~~ 152 (507)
. .+...-.+++.. ++.|++... .-+++||+.+++|......... +.......+... ++
T Consensus 448 ---------~-l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 448 ---------Q-LVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp ---------C-CSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred ---------C-cCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 1 111111222222 466776432 1288999999999887532100 111111122222 35
Q ss_pred EEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecC---CCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 153 RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVT---QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 153 ~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~---g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
.|++... +.+++||+.+.++ ..... ..++ .....+++...++.|++... +-+++||+.+.
T Consensus 510 ~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~-~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~ 572 (795)
T 4a2l_A 510 RLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVT-KLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDK 572 (795)
T ss_dssp CEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGG-GSCEEEEEECTTSCEEEEES-------SCEEEEETTTT
T ss_pred CEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCC-CCeeEEEEECCCCCEEEEeC-------CCceeECCCCC
Confidence 6776432 2499999988888 44311 0111 11112233334566776432 24899999999
Q ss_pred cEEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCc
Q 010571 230 EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE 308 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~ 308 (507)
.+........+|.... .+++.- ++.|++.+. +.+..||+.+.++.......+. +.......++....+
T Consensus 573 ~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl---~~~~f~~~~~~~~~~ 641 (795)
T 4a2l_A 573 QIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGL---QSNQFNTASYCRTSV 641 (795)
T ss_dssp EEEEECGGGTCSCSCE-EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTC---SCSCEEEEEEEECTT
T ss_pred cEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCC---ccccCccCceeECCC
Confidence 8887643333443322 222222 457777642 2478999999988876543322 111222233344444
Q ss_pred eEEEEEcccCCCcCCeEEEEECCC
Q 010571 309 HHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 309 ~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
+.|++ ||.+ -+..|++..
T Consensus 642 G~l~~-g~~~-----Gl~~~~p~~ 659 (795)
T 4a2l_A 642 GQMYF-GGIN-----GITTFRPEL 659 (795)
T ss_dssp SCEEE-EETT-----EEEEECGGG
T ss_pred CeEEE-ecCC-----ceEEEcHHH
Confidence 45544 6643 366666643
No 41
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.39 E-value=0.059 Score=53.09 Aligned_cols=242 Identities=10% Similarity=0.064 Sum_probs=122.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
+..+.+.+....+.....++++|+....-..+.... ......+..-+++.+++++.... .
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~-----------------~~v~~~~~Spdg~~la~~s~~~~---~ 202 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP-----------------QPLMSPAWSPDGSKLAYVTFESG---R 202 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES-----------------SCEEEEEECTTSSEEEEEECTTS---S
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC-----------------CcceeeEEcCCCCEEEEEEecCC---C
Confidence 445444443222222367899998765544443211 11111111225555555554322 2
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CC-EEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCC
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~-~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r 193 (507)
..++++|+.+++...+. ..+. ...+..+ ++ .|++.+..+. ...++.+|+.+++...+... ..
T Consensus 203 ~~i~~~d~~tg~~~~l~---~~~~---~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~-----~~ 267 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVA---SFPR---HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDG-----RS 267 (415)
T ss_dssp CEEEEEETTTCCEEEEE---CCSS---CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCC-----SS
T ss_pred cEEEEEECCCCcEEEee---cCCC---cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCC-----CC
Confidence 46999999999877664 2221 1222333 34 4555554332 34699999998887655421 11
Q ss_pred CCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceE
Q 010571 194 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 194 ~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~ 271 (507)
.....+...++..+++++..+. ...++.+|+.++.-..+.. ... ....+.+ +++.+++++... ....+
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~~~~l~~-----~~~-~~~~~~~spdG~~l~~~~~~~--g~~~i 337 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGGAPQRITW-----EGS-QNQDADVSSDGKFMVMVSSNG--GQQHI 337 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSSCCEECCC-----SSS-EEEEEEECTTSSEEEEEEECS--SCEEE
T ss_pred cccceEECCCCCEEEEEECCCC--CcEEEEEECCCCCEEEEec-----CCC-cccCeEECCCCCEEEEEECcC--CceEE
Confidence 1122333345544555543211 2479999998876544321 111 1122333 455555554332 13478
Q ss_pred EEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 272 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 272 ~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
+++|+.+.....+... .........+++ ..+++++.++. ...+|.+|+....
T Consensus 338 ~~~d~~~~~~~~l~~~---------~~~~~~~~spdg-~~l~~~s~~~~-~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 338 AKQDLATGGVQVLSST---------FLDETPSLAPNG-TMVIYSSSQGM-GSVLNLVSTDGRF 389 (415)
T ss_dssp EEEETTTCCEEECCCS---------SSCEEEEECTTS-SEEEEEEEETT-EEEEEEEETTSCC
T ss_pred EEEECCCCCEEEecCC---------CCcCCeEEcCCC-CEEEEEEcCCC-ccEEEEEECCCCc
Confidence 9999998877654321 111222233344 34455554321 3478999986543
No 42
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.35 E-value=0.0069 Score=55.78 Aligned_cols=233 Identities=8% Similarity=-0.037 Sum_probs=117.9
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCC-CceeEeeeccccccCcc
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRS-LAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t-~~W~~~~~~~~~~~~~~ 79 (507)
+...+++|+.+.....+... ...-.+++.. ++..+++++ ...++++|+.+ +....+....
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~------- 82 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-----PELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGF------- 82 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-----SSCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTT-------
T ss_pred ceeEEEEeCCCCceeeeccC-----CcceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEecccc-------
Confidence 34578899988887765521 1112222222 455555554 24799999998 7665543221
Q ss_pred ccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CC-EEEEE
Q 010571 80 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIF 157 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~l~~~ 157 (507)
...........-+++.+++++.... ....++.++..++.-..+.. .. . ...++.. ++ .|++.
T Consensus 83 --------~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~---~~-~--~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 83 --------ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTK---NL-P--SYWHGWSPDGKSFTYC 146 (297)
T ss_dssp --------CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCS---SS-S--EEEEEECTTSSEEEEE
T ss_pred --------ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeec---CC-C--ccceEECCCCCEEEEE
Confidence 0111122222235555555553322 24569999988877555431 11 1 1222222 33 55555
Q ss_pred cCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeC-CCCCcCCCcEEEEECCCCcEEeeee
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGG-CSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG-~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
++.+. ...++.+++.+.....+... ......+....++..+++++ .++ ...+|.+++.......+..
T Consensus 147 ~~~~~----~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 147 GIRDQ----VFDIYSMDIDSGVETRLTHG-----EGRNDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEETT----EEEEEEEETTTCCEEECCCS-----SSCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCC
T ss_pred ECCCC----ceEEEEEECCCCcceEcccC-----CCccccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEec
Confidence 54432 22577777877776555321 11112233334444444443 222 3568888877776665421
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEeccCCCC------CcceEEEEEcCcCeeEEecc
Q 010571 237 KGDLVTGRAGHAGITI--DENWYIVGGGDNNN------GCQETIVLNMTKLAWSILTS 286 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~------~~~d~~~~d~~~~~W~~~~~ 286 (507)
.......+.+ +++.+++++..... ....++++|+.+.....+..
T Consensus 215 ------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 215 ------SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp ------CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ------CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 1112222333 45555555533221 12468999998887766543
No 43
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.35 E-value=0.023 Score=61.22 Aligned_cols=269 Identities=10% Similarity=-0.008 Sum_probs=140.8
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccc
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~ 80 (507)
+.|+++||+....+..+.....++... -++++.. ++.|++ |.. ...+++||+.++.+.......
T Consensus 382 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~d~~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~~-------- 446 (781)
T 3v9f_A 382 GGGINVFENGKRVAIYNKENRELLSNS-VLCSLKDSEGNLWF-GTY-----LGNISYYNTRLKKFQIIELEK-------- 446 (781)
T ss_dssp SSCEEEEETTEEEEECC-----CCCSB-EEEEEECTTSCEEE-EET-----TEEEEEECSSSCEEEECCSTT--------
T ss_pred CCcEEEEECCCCeEEEccCCCCCCCcc-eEEEEECCCCCEEE-Eec-----cCCEEEEcCCCCcEEEeccCC--------
Confidence 357888998877776553211111111 1222222 556666 321 245899999999887765311
Q ss_pred cCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEE
Q 010571 81 DSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~ 157 (507)
.....-.+++.. ++.|++... .-+++||+.+++|.........+.......+... ++.|++-
T Consensus 447 -------~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 447 -------NELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp -------TCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred -------CCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE
Confidence 011122233332 567776431 2389999999998877532111111111122222 3566664
Q ss_pred cCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcE-EEEECCCCcEEeeee
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDL-HVLDLQTNEWSQPEI 236 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i-~~~d~~~~~W~~~~~ 236 (507)
. . .+.+++||+.+.++........+|... -.+++...++.|++... +-+ .+||+.+..+.....
T Consensus 512 t-~------~~Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~ 576 (781)
T 3v9f_A 512 T-F------GGGVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQR 576 (781)
T ss_dssp E-S------SSCEEEECTTCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECG
T ss_pred E-c------CCCEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccc
Confidence 2 1 124899999999988876432233221 12233334566776432 236 889998888877644
Q ss_pred cCCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEc
Q 010571 237 KGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFG 315 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~G 315 (507)
...+|.... .+++.- ++.|++.+. +.+.+||+.+..+.......+.. ...+...++....++.|+ ||
T Consensus 577 ~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~dGl~---~~~f~~~~~~~~~~G~l~-~g 644 (781)
T 3v9f_A 577 KEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHSNNIP---QGSFISGCVTKDHNGLIY-FG 644 (781)
T ss_dssp GGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGGGTCC---SSCEEEEEEEECTTSCEE-EE
T ss_pred cCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEecccCCcc---ccccccCceEECCCCEEE-EE
Confidence 333443332 233332 466776532 24789999999888765433321 112222333444444444 46
Q ss_pred ccCCCcCCeEEEEECCC
Q 010571 316 GYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 316 G~~~~~~~~v~~~~~~~ 332 (507)
|.+ -+..|++..
T Consensus 645 ~~~-----Gl~~f~p~~ 656 (781)
T 3v9f_A 645 SIN-----GLCFFNPDI 656 (781)
T ss_dssp ETT-----EEEEECSCC
T ss_pred CCC-----ceEEEChhh
Confidence 643 366777653
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.33 E-value=0.094 Score=49.12 Aligned_cols=187 Identities=17% Similarity=0.072 Sum_probs=98.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.......... .......+.+ ++.+++.|+.+
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~~l~~~~~d---- 162 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTS----------------SAPACYALAISPDSKVCFSCCSD---- 162 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEEC----------------SSSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeeccc----------------CCCceEEEEECCCCCEEEEEeCC----
Confidence 45566666532 468899998887544433221 1111222222 55666666643
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
..+.+||+.+++..... ... .....++.+ ++..++.|+.+ ..+..||+.+.+-..... . .
T Consensus 163 --g~v~~~d~~~~~~~~~~---~~~--~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~---~--~ 224 (337)
T 1gxr_A 163 --GNIAVWDLHNQTLVRQF---QGH--TDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHD---F--T 224 (337)
T ss_dssp --SCEEEEETTTTEEEEEE---CCC--SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEE---C--S
T ss_pred --CcEEEEeCCCCceeeee---ecc--cCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeec---C--C
Confidence 23889999887644332 111 111222333 45566666642 369999998776443321 1 1
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcce
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d 270 (507)
....+++...++.++++|+.+ ..+.+||+.+..-..+. + .......+.+ ++.+++.|+.++ .
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~--~----~~~~v~~~~~~~~~~~l~~~~~dg-----~ 288 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKYQLH--L----HESCVLSLKFAYCGKWFVSTGKDN-----L 288 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEETTSSCEEEEC--C----CSSCEEEEEECTTSSEEEEEETTS-----E
T ss_pred CceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeEEEc--C----CccceeEEEECCCCCEEEEecCCC-----c
Confidence 112334444555577777654 45889998876543321 1 1111222333 456777776432 5
Q ss_pred EEEEEcCcCeeE
Q 010571 271 TIVLNMTKLAWS 282 (507)
Q Consensus 271 ~~~~d~~~~~W~ 282 (507)
+.+||+.+..-.
T Consensus 289 i~~~~~~~~~~~ 300 (337)
T 1gxr_A 289 LNAWRTPYGASI 300 (337)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCeEE
Confidence 788898776543
No 45
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.33 E-value=0.029 Score=57.62 Aligned_cols=272 Identities=13% Similarity=0.087 Sum_probs=134.1
Q ss_pred CeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEC--CCCceeEeeeccccccCccc
Q 010571 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDL--RSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~--~t~~W~~~~~~~~~~~~~~~ 80 (507)
+..+|+.+.+-...-..+ ..-|++++. +..||+.+. . +.+.+||+ .+++-...-..+
T Consensus 161 V~v~D~~t~~~~~~i~~g-----~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~~~~~i~~g-------- 221 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDTG-----YAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPTKVAEIKIG-------- 221 (543)
T ss_dssp EEEEETTTCCEEEEEECS-----TTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCEEEEEEECC--------
T ss_pred EEEEECCCceEEEEEecC-----cccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCcEEEEEecC--------
Confidence 556777766544322111 113555443 456666654 1 67999999 665432211111
Q ss_pred cCCccCCCCCccceeeEEE----CC-EEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCC--------CCCcccceE
Q 010571 81 DSGLLEVLPPMSDHCMVKW----GT-KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV--------PVARGGHSV 147 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~----~~-~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~--------p~~r~~~~~ 147 (507)
....+.+..- ++ .||+. ... .+.+.++|..+.+-...-....+ |.++.....
T Consensus 222 ---------~~p~~va~sp~~~~dg~~l~v~-~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 222 ---------IEARSVESSKFKGYEDRYTIAG-AYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp ---------SEEEEEEECCSTTCTTTEEEEE-EEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred ---------CCcceEEeCCCcCCCCCEEEEE-Ecc-----CCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 1112223332 44 45544 322 23588889888765443221111 111221111
Q ss_pred EEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcE-EEEEeCCCCCcCCCcEEEEE
Q 010571 148 TLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRY-LIVFGGCSHSIFFNDLHVLD 225 (507)
Q Consensus 148 ~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~-l~i~GG~~~~~~~~~i~~~d 225 (507)
..- +..+|+... ..+.+..+|..+.+-..+.. .+..+.-+.++...++. +|+.+.. .+.+.++|
T Consensus 287 ~s~~~~~~~vs~~------~~g~i~vvd~~~~~~l~~~~---i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D 352 (543)
T 1nir_A 287 ASHEHPEFIVNVK------ETGKVLLVNYKDIDNLTVTS---IGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVID 352 (543)
T ss_dssp ECSSSSEEEEEET------TTTEEEEEECTTSSSCEEEE---EECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEE
T ss_pred ECCCCCEEEEEEC------CCCeEEEEEecCCCcceeEE---eccCcCccCceECCCCCEEEEEecC-----CCeEEEEE
Confidence 112 335554432 14579999987754222111 11233334455555554 4444322 26788999
Q ss_pred CCCCcEEeeeecCCCCCCCcceEEEEE-C-CEEEEEeccCCCCCcceEEEEEcCcC-----eeEEeccCCCCCCCCCCCC
Q 010571 226 LQTNEWSQPEIKGDLVTGRAGHAGITI-D-ENWYIVGGGDNNNGCQETIVLNMTKL-----AWSILTSVKGRNPLASEGL 298 (507)
Q Consensus 226 ~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~~~~~~~d~~~~d~~~~-----~W~~~~~~~~~~p~~~~~~ 298 (507)
+.+++-...-..+..|.+..+.. +.. + +.+|+.+.... +.+-++|+.+. .|+.+..++... +.
T Consensus 353 ~~tg~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~~~g-----~~ 422 (543)
T 1nir_A 353 SKDRRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQGQG-----GG 422 (543)
T ss_dssp TTTTEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEECSC-----SC
T ss_pred CCCCeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEEcCC-----CC
Confidence 99987655322345555433322 223 2 56777654221 25778887762 377766554321 11
Q ss_pred ceEEEEEcCceEEEEEcccCC--CcCCeEEEEECCCCC
Q 010571 299 SVCSAIIEGEHHLVAFGGYNG--KYNNEVFVMRLKPRD 334 (507)
Q Consensus 299 ~~~~~~~~~~~~l~v~GG~~~--~~~~~v~~~~~~~~~ 334 (507)
.......++..+|++-.-.+. .....|.+||+.+..
T Consensus 423 ~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 423 SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred ceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 223334555667777431111 135689999998765
No 46
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.33 E-value=0.013 Score=53.37 Aligned_cols=201 Identities=11% Similarity=-0.051 Sum_probs=116.8
Q ss_pred cceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEE
Q 010571 92 SDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVH 171 (507)
Q Consensus 92 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~ 171 (507)
+...+...++.||+..|... .+..+|+.|++=..-. ++....+..++..+++||+.... .+.++
T Consensus 56 ftqGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~------~~~v~ 119 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWT------EGLLF 119 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESS------SCEEE
T ss_pred ccceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEcc------CCEEE
Confidence 34666667999999988643 2889999998643321 23333444567778899998653 45799
Q ss_pred EEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-eeecCCCCCCCcc-eEE
Q 010571 172 FLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAG-HAG 249 (507)
Q Consensus 172 ~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~-~~~ 249 (507)
+||+.+.+-..--. .+-.+.+++. .++.||+.-| .+.++.+|+.+..-.. +.+ +..+.+... -.+
T Consensus 120 V~D~~Tl~~~~ti~-----~~~eGwGLt~-Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V-~~~g~~v~~lNeL 186 (268)
T 3nok_A 120 TWSGMPPQRERTTR-----YSGEGWGLCY-WNGKLVRSDG------GTMLTFHEPDGFALVGAVQV-KLRGQPVELINEL 186 (268)
T ss_dssp EEETTTTEEEEEEE-----CSSCCCCEEE-ETTEEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEE
T ss_pred EEECCcCcEEEEEe-----CCCceeEEec-CCCEEEEECC------CCEEEEEcCCCCeEEEEEEe-CCCCccccccccc
Confidence 99999876543322 1223445554 4567898765 2689999999876544 322 122222111 123
Q ss_pred EEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCC---C--CCCCCCc-eEEEEEcCceEEEEEcccCCCcCC
Q 010571 250 ITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRN---P--LASEGLS-VCSAIIEGEHHLVAFGGYNGKYNN 323 (507)
Q Consensus 250 ~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~---p--~~~~~~~-~~~~~~~~~~~l~v~GG~~~~~~~ 323 (507)
...++.||+-- + ..+++.++|+.+..-...-.+.+.. + ....... -..+..+..+.|||.|-. ..
T Consensus 187 e~~dG~lyanv-w----~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~----Wp 257 (268)
T 3nok_A 187 ECANGVIYANI-W----HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL----WP 257 (268)
T ss_dssp EEETTEEEEEE-T----TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT----CS
T ss_pred EEeCCEEEEEE-C----CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC----CC
Confidence 44588888532 1 2347999999998644332222100 0 0111222 233344456789987753 45
Q ss_pred eEEEEEC
Q 010571 324 EVFVMRL 330 (507)
Q Consensus 324 ~v~~~~~ 330 (507)
.+|...+
T Consensus 258 ~~~ev~~ 264 (268)
T 3nok_A 258 RLFEVRL 264 (268)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 5665543
No 47
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.32 E-value=0.13 Score=49.56 Aligned_cols=212 Identities=13% Similarity=0.084 Sum_probs=118.3
Q ss_pred CCCeEeeCCCC--CeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCc
Q 010571 3 SGSWHLELPYD--LWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADK 78 (507)
Q Consensus 3 ~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~ 78 (507)
..+++||+.+. .|..-.. + ....+.++.++.||+..+ ...++.||+.++. |........
T Consensus 113 g~l~a~d~~tG~~~W~~~~~-~-----~~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~----- 175 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVA-G-----EALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPS----- 175 (376)
T ss_dssp SEEEEEETTTCCEEEEEECS-S-----CCCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-------
T ss_pred CEEEEEECCCCCEEEEEeCC-C-----ceEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCc-----
Confidence 45789998755 4754331 1 112233456787777543 2469999998875 765432110
Q ss_pred cccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCc--------ccceEE
Q 010571 79 TEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVAR--------GGHSVT 148 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r--------~~~~~~ 148 (507)
...+...+.+..++.||+. .. ...+..||+.+++ |+... ..|... .....+
T Consensus 176 ---------~~~~~~~~~~~~~~~v~~g-~~------~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~~~~~~~p~ 236 (376)
T 3q7m_A 176 ---------LSLRGESAPTTAFGAAVVG-GD------NGRVSAVLMEQGQMIWQQRI---SQATGSTEIDRLSDVDTTPV 236 (376)
T ss_dssp ------------CCCCCCEEETTEEEEC-CT------TTEEEEEETTTCCEEEEEEC---CC-----------CCCCCCE
T ss_pred ---------eeecCCCCcEEECCEEEEE-cC------CCEEEEEECCCCcEEEEEec---ccCCCCcccccccccCCCcE
Confidence 1112233445557877763 21 2358999998774 66543 112111 123334
Q ss_pred EECCEEEEEcCcCCCCCccCcEEEEEcCCCc--EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEEC
Q 010571 149 LVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDL 226 (507)
Q Consensus 149 ~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~ 226 (507)
..++.+|+.+. ...+++||+.+++ |.... + ......+.++.+|+.... ..++.||+
T Consensus 237 ~~~~~v~~~~~-------~g~l~~~d~~tG~~~w~~~~-----~----~~~~~~~~~~~l~~~~~~------g~l~~~d~ 294 (376)
T 3q7m_A 237 VVNGVVFALAY-------NGNLTALDLRSGQIMWKREL-----G----SVNDFIVDGNRIYLVDQN------DRVMALTI 294 (376)
T ss_dssp EETTEEEEECT-------TSCEEEEETTTCCEEEEECC-----C----CEEEEEEETTEEEEEETT------CCEEEEET
T ss_pred EECCEEEEEec-------CcEEEEEECCCCcEEeeccC-----C----CCCCceEECCEEEEEcCC------CeEEEEEC
Confidence 56778887642 2369999998774 65432 1 112333446768876532 46999999
Q ss_pred CCCc--EEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCe--eEE
Q 010571 227 QTNE--WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA--WSI 283 (507)
Q Consensus 227 ~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~--W~~ 283 (507)
.++. |+.. .. ..+...+.++.++.+|+... ...++.||+.+.+ |+.
T Consensus 295 ~tG~~~w~~~----~~-~~~~~~~~~~~~~~l~v~~~------~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 295 DGGVTLWTQS----DL-LHRLLTSPVLYNGNLVVGDS------EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TTCCEEEEEC----TT-TTSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEE
T ss_pred CCCcEEEeec----cc-CCCcccCCEEECCEEEEEeC------CCeEEEEECCCCcEEEEE
Confidence 8875 7652 11 12222344556777776532 1258899988775 553
No 48
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.26 E-value=0.061 Score=50.64 Aligned_cols=277 Identities=14% Similarity=0.059 Sum_probs=123.6
Q ss_pred CCCeEeeCC-CCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECC--CCceeEeeeccccccC
Q 010571 3 SGSWHLELP-YDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLR--SLAWSNLRLETELDAD 77 (507)
Q Consensus 3 ~~~~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~--t~~W~~~~~~~~~~~~ 77 (507)
..++.||+. ......+.. .+....-++++.. +..||+.+.. ...+.+|++. ++++..+......
T Consensus 15 ~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~--- 83 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQV---VDVPGQVQPMVVSPDKRYLYVGVRP-----EFRVLAYRIAPDDGALTFAAESALP--- 83 (343)
T ss_dssp TEEEEEEECTTSCEEEEEE---EECSSCCCCEEECTTSSEEEEEETT-----TTEEEEEEECTTTCCEEEEEEEECS---
T ss_pred CeEEEEEECCCCcEEEeee---EecCCCCceEEECCCCCEEEEeecC-----CCeEEEEEecCCCCceeeccccccC---
Confidence 345667664 445554432 1222222233333 4456655442 1457777776 7777766543310
Q ss_pred ccccCCccCCCCCccceeeEEEC-CEEEEEcccCCCCCCcceEEEEECCCCc-EEEeecCCCCCCCcccceEEEE--CCE
Q 010571 78 KTEDSGLLEVLPPMSDHCMVKWG-TKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPVARGGHSVTLV--GSR 153 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~ 153 (507)
....+.+..-+ +.||+.+.. ...+.+||+.++. ...... .+....-+.++.. +..
T Consensus 84 ------------~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 84 ------------GSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDV---VEGLDGCHSANISPDNRT 142 (343)
T ss_dssp ------------SCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEE---ECCCTTBCCCEECTTSSE
T ss_pred ------------CCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCcccccccc---ccCCCCceEEEECCCCCE
Confidence 11111112223 446665432 2347777774332 222221 1111112222222 336
Q ss_pred EEEEcCcCCCCCccCcEEEEEcCC-CcEEEee--cCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECC--
Q 010571 154 LIIFGGEDRSRKLLNDVHFLDLET-MTWDAVE--VTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQ-- 227 (507)
Q Consensus 154 l~~~GG~~~~~~~~~~~~~~d~~t-~~W~~~~--~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~-- 227 (507)
+|+.+.. .+.+.+||+.+ ++..... .. ..+....-..++...++ .+|+.+..+ +.+.+|++.
T Consensus 143 l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~~~ 210 (343)
T 1ri6_A 143 LWVPALK------QDRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELKDP 210 (343)
T ss_dssp EEEEEGG------GTEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESSCT
T ss_pred EEEecCC------CCEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEecCC
Confidence 7665522 23699999987 6665432 11 11111111223343444 466665332 568888884
Q ss_pred CCcEEeeeecCCCCCC---CcceEEEEE--CC-EEEEEeccCCCCCcceEEEEEcC--cCeeEEeccCCCCCCCCCCCCc
Q 010571 228 TNEWSQPEIKGDLVTG---RAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNMT--KLAWSILTSVKGRNPLASEGLS 299 (507)
Q Consensus 228 ~~~W~~~~~~~~~p~~---r~~~~~~~~--~~-~l~v~GG~~~~~~~~d~~~~d~~--~~~W~~~~~~~~~~p~~~~~~~ 299 (507)
+..+.........|.. ......+.+ ++ .+|+.+..+ ..+.+||+. +..+..+..++.. +..
T Consensus 211 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~------~~~ 279 (343)
T 1ri6_A 211 HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTE------TQP 279 (343)
T ss_dssp TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECS------SSC
T ss_pred CCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCC------Ccc
Confidence 3444332221222221 122223444 23 465554322 357788877 5556655443321 111
Q ss_pred eEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCCCC
Q 010571 300 VCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 336 (507)
Q Consensus 300 ~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~w~ 336 (507)
......+++..|++.++.++ .-.+|.+|+.+..+.
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~--~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSH--HISVYEIVGEQGLLH 314 (343)
T ss_dssp CCEEECTTSSEEEEECTTTC--EEEEEEEETTTTEEE
T ss_pred ceEEECCCCCEEEEecCCCC--eEEEEEEcCCCceee
Confidence 12233444556777654332 223555576555443
No 49
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.24 E-value=0.21 Score=53.66 Aligned_cols=256 Identities=9% Similarity=0.057 Sum_probs=131.2
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEE-ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAV-FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
.|.++||+.++.+..+......+.... .+++. -++.|++... +.+++||+.++++..+....
T Consensus 107 ~Gl~~yd~~~~~f~~~~~~~~~~~~~i-~~i~~d~~g~lwi~t~-------~gl~~~~~~~~~~~~~~~~~--------- 169 (795)
T 4a2l_A 107 DGLSRYDEEKDIFQNFFYEKNGKHLQV-NGIEEISPEQLLISTP-------EGLIMFDIKESKFIDDSFST--------- 169 (795)
T ss_dssp SCEEEEETTTTEEEEECCEETTEECCC-CEEEEEETTEEEEEET-------TEEEEEETTTTEEECSSSCH---------
T ss_pred CchheeCCCCCeEEeccccccCCCceE-EEEEECCCCCEEEEEC-------CceEEEECCCCEEEeccCCC---------
Confidence 578899999998887753111110001 22322 3677777532 45899999988776543210
Q ss_pred CCccCCCCCc-cceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEE-ECCEEEEEcC
Q 010571 82 SGLLEVLPPM-SDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGG 159 (507)
Q Consensus 82 ~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~l~~~GG 159 (507)
+... ....+...++.|++.. . ..-++.||+.++++..... .+....-.++.. -++.|++..
T Consensus 170 ------~~~~~i~~i~~d~~g~lwigt-~------~~Gl~~~~~~~~~~~~~~~---~~~~~~i~~i~~d~~g~lwigt- 232 (795)
T 4a2l_A 170 ------AMHKTIASTLYRQGDQIYIGT-S------TDGLYTYSITQKTFEKVIP---ILGTKQIQAILQQSPTRIWVAT- 232 (795)
T ss_dssp ------HHHTCCEEEEEEETTEEEEEE-S------SSCEEEEETTTCCEEECC-------CCCEEEEEEEETTEEEEEE-
T ss_pred ------CCCcceEEEEECCCCCEEEEE-C------CCCEEEEeCCCCeEEEecC---CCCCCeeEEEEEcCCCCEEEEE-
Confidence 0011 1122223478888832 1 1138899999998877631 111111122222 356777642
Q ss_pred cCCCCCccCcEEEEEcCCCcEEEeecCCCCCC---CCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeee
Q 010571 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA---PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 160 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~---~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
. .+.+++||+.+.++.........+. ...-.+++...++.|+|.. . +-+.+||+.+..+.....
T Consensus 233 ~------~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~------~Gl~~~~~~~~~~~~~~~ 299 (795)
T 4a2l_A 233 E------GAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-F------NDLNIYHEGTDSFASYSS 299 (795)
T ss_dssp B------SSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-S------SCEEEEETTTTEEEEECC
T ss_pred C------CCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-C------ChhheEcCCCCeEEEEec
Confidence 1 2359999999988887753211111 1112233333456577633 1 248899999999887643
Q ss_pred cCCCCCCCc-ce-EEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEE
Q 010571 237 KGDLVTGRA-GH-AGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLV 312 (507)
Q Consensus 237 ~~~~p~~r~-~~-~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~ 312 (507)
....+.... .. .+... ++.|+|- ... .-+..|++.+..+..+...+.. .........++..+.++.|+
T Consensus 300 ~~~~~~~l~~~~i~~i~~D~~g~lWig-t~~-----~Gl~~~~~~~~~~~~~~~~~~~--~~l~~~~V~~i~~d~~g~lW 371 (795)
T 4a2l_A 300 NPVENGSLSQRSVRSIFMDSQGGMWLG-TYF-----GGLNYYHPIRNRFKNIRNIPYK--NSLSDNVVSCIVEDKDKNLW 371 (795)
T ss_dssp CTTSTTSCSSSCEEEEEECTTSCEEEE-ESS-----SCEEEECGGGGSSEEECCCTTS--SSCSCSSEEEEEECTTSCEE
T ss_pred CCCCCCCCCCCcEEEEEEeCCcCEEEE-ECC-----CCeEEeCCCcccceEEcCCCCC--CCCCCCeeEEEEECCCCCEE
Confidence 211111111 11 12222 4567753 211 1377888888877765443221 11112234444444444566
Q ss_pred E
Q 010571 313 A 313 (507)
Q Consensus 313 v 313 (507)
+
T Consensus 372 i 372 (795)
T 4a2l_A 372 I 372 (795)
T ss_dssp E
T ss_pred E
Confidence 5
No 50
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.22 E-value=0.13 Score=50.66 Aligned_cols=186 Identities=14% Similarity=0.188 Sum_probs=98.6
Q ss_pred ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCC
Q 010571 36 FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSD 115 (507)
Q Consensus 36 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 115 (507)
.++.+++.|+.+ ..+.+||..++.-...-.. ......++.+++..++.|+.+.
T Consensus 181 ~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~------------------h~~~v~~l~~~~~~l~s~s~dg---- 233 (435)
T 1p22_A 181 YDERVIITGSSD-----STVRVWDVNTGEMLNTLIH------------------HCEAVLHLRFNNGMMVTCSKDR---- 233 (435)
T ss_dssp CCSSEEEEEETT-----SCEEEEESSSCCEEEEECC------------------CCSCEEEEECCTTEEEEEETTS----
T ss_pred ECCCEEEEEcCC-----CeEEEEECCCCcEEEEEcC------------------CCCcEEEEEEcCCEEEEeeCCC----
Confidence 366677777743 4588999988764322111 1122333344555666766432
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 195 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~ 195 (507)
.+.+||..+..-..... ..........++.+++..++.|+.+ ..+.+||+.+.+-...-. + ....
T Consensus 234 --~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~-~----~~~~ 298 (435)
T 1p22_A 234 --SIAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDKYIVSASGD------RTIKVWNTSTCEFVRTLN-G----HKRG 298 (435)
T ss_dssp --CEEEEECSSSSCCEEEE--EECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTTCCEEEEEE-C----CSSC
T ss_pred --cEEEEeCCCCCCceeee--EecCCCCcEEEEEeCCCEEEEEeCC------CeEEEEECCcCcEEEEEc-C----CCCc
Confidence 38888887764321110 0111112222333455566666543 358999998876443321 1 1112
Q ss_pred ceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEE
Q 010571 196 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLN 275 (507)
Q Consensus 196 ~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d 275 (507)
..++...++ +++.|+.+ +.+.+||+.++.-...- ......-.++.+++..++.|+.++ .+.+||
T Consensus 299 v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~l~sg~~dg-----~i~vwd 362 (435)
T 1p22_A 299 IACLQYRDR-LVVSGSSD-----NTIRLWDIECGACLRVL-----EGHEELVRCIRFDNKRIVSGAYDG-----KIKVWD 362 (435)
T ss_dssp EEEEEEETT-EEEEEETT-----SCEEEEETTTCCEEEEE-----CCCSSCEEEEECCSSEEEEEETTS-----CEEEEE
T ss_pred EEEEEeCCC-EEEEEeCC-----CeEEEEECCCCCEEEEE-----eCCcCcEEEEEecCCEEEEEeCCC-----cEEEEE
Confidence 233344455 66677654 46899999876543311 111122234445778888887554 377888
Q ss_pred cCcC
Q 010571 276 MTKL 279 (507)
Q Consensus 276 ~~~~ 279 (507)
+.+.
T Consensus 363 ~~~~ 366 (435)
T 1p22_A 363 LVAA 366 (435)
T ss_dssp HHHH
T ss_pred CCCC
Confidence 7544
No 51
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.21 E-value=0.13 Score=47.28 Aligned_cols=255 Identities=9% Similarity=-0.028 Sum_probs=129.1
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
.++.||+. ..+..+.... ....-++++.. ++.+|+.... ...+++||+. +....+....
T Consensus 37 ~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~---------- 96 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEYTLPN---------- 96 (299)
T ss_dssp EEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSS----------
T ss_pred cEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEEeCCC----------
Confidence 46778887 7777665211 11222334332 5677776432 2358889886 5554443210
Q ss_pred CccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCc
Q 010571 83 GLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGE 160 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~ 160 (507)
....-++++.. ++.||+.... ...+.+||+ ++......... ....-..++.. ++.+|+....
T Consensus 97 ------~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 97 ------PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPN---KGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp ------TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCEEEEETT
T ss_pred ------cCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCEEEEeCC
Confidence 01122333333 5788886532 235889998 77666553211 11111223322 4577775421
Q ss_pred CCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCC
Q 010571 161 DRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 240 (507)
Q Consensus 161 ~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 240 (507)
.+.+++||+ +++......... ...-.+++...++.+|+.... .+.+.+||+ ++.+.....
T Consensus 161 ------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~---- 220 (299)
T 2z2n_A 161 ------NNAIGRITE-SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKI---- 220 (299)
T ss_dssp ------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC----
T ss_pred ------CCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEEC----
Confidence 346999999 777776532111 111223444445668776532 256899999 777665422
Q ss_pred CCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccC
Q 010571 241 VTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYN 318 (507)
Q Consensus 241 p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~ 318 (507)
+........+.+ ++.+|+.... .+.+.+||+ +.....+..... ......+.+ .++.|++...
T Consensus 221 ~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~-------~~~~~~i~~-~~g~l~v~~~-- 284 (299)
T 2z2n_A 221 PTPNARPHAITAGAGIDLWFTEWG-----ANKIGRLTS-NNIIEEYPIQIK-------SAEPHGICF-DGETIWFAME-- 284 (299)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETT-----TTEEEEEET-TTEEEEEECSSS-------SCCEEEEEE-CSSCEEEEET--
T ss_pred CCCCCCceeEEECCCCCEEEeccC-----CceEEEECC-CCceEEEeCCCC-------CCccceEEe-cCCCEEEEec--
Confidence 111122233333 4577776421 235889998 445444422110 112223333 4446776543
Q ss_pred CCcCCeEEEEECCCC
Q 010571 319 GKYNNEVFVMRLKPR 333 (507)
Q Consensus 319 ~~~~~~v~~~~~~~~ 333 (507)
.+.+++|++.+.
T Consensus 285 ---~~~l~~~~~~~~ 296 (299)
T 2z2n_A 285 ---CDKIGKLTLIKD 296 (299)
T ss_dssp ---TTEEEEEEEC--
T ss_pred ---CCcEEEEEcCcc
Confidence 256888887654
No 52
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.21 E-value=0.13 Score=47.87 Aligned_cols=230 Identities=12% Similarity=0.108 Sum_probs=114.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|..++.....-.. .......+.+ ++.+++.|+.+
T Consensus 34 ~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~------------------h~~~v~~~~~~~~~~~l~s~~~d---- 86 (312)
T 4ery_A 34 NGEWLASSSAD-----KLIKIWGAYDGKFEKTISG------------------HKLGISDVAWSSDSNLLVSASDD---- 86 (312)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEEECC------------------CSSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEeeCC-----CeEEEEeCCCcccchhhcc------------------CCCceEEEEEcCCCCEEEEECCC----
Confidence 45566666633 3578889888776443221 1112222333 56677777643
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
..+.+||..++.-...-. .......++.+ ++.+++.|+.+ ..+.+||+.+.+-...-. . ..
T Consensus 87 --~~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~--~--~~ 149 (312)
T 4ery_A 87 --KTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKTLP--A--HS 149 (312)
T ss_dssp --SEEEEEETTTCCEEEEEE-----CCSSCEEEEEECSSSSEEEEEETT------SCEEEEETTTCCEEEEEC--C--CS
T ss_pred --CEEEEEECCCCcEEEEEc-----CCCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEEec--C--CC
Confidence 358899988876433221 01111122223 34566667654 358999998776443321 1 01
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcce
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d 270 (507)
..-.++....++.+++.|+.+ ..+.+||+.+.......... .......+.+ ++..++.|+.++ .
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d~-----~ 215 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDD----DNPPVSFVKFSPNGKYILAATLDN-----T 215 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCS----SCCCEEEEEECTTSSEEEEEETTT-----E
T ss_pred CcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCceeeEEecc----CCCceEEEEECCCCCEEEEEcCCC-----e
Confidence 111223333455577777764 45889999877644321101 1111122333 456667766433 5
Q ss_pred EEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 271 TIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 271 ~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
+.+||+.+..-... +..... . ...........+..+++.|+.+ ..+.++|+...
T Consensus 216 i~iwd~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~~l~sg~~d----g~i~vwd~~~~ 269 (312)
T 4ery_A 216 LKLWDYSKGKCLKT--YTGHKN-E--KYCIFANFSVTGGKWIVSGSED----NLVYIWNLQTK 269 (312)
T ss_dssp EEEEETTTTEEEEE--ECSSCC-S--SSCCCEEEECSSSCEEEECCTT----SCEEEEETTTC
T ss_pred EEEEECCCCcEEEE--EEecCC-c--eEEEEEEEEeCCCcEEEEECCC----CEEEEEECCCc
Confidence 78899887653321 111110 0 1111111222233466667754 45778887554
No 53
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.14 E-value=0.13 Score=50.75 Aligned_cols=224 Identities=14% Similarity=0.157 Sum_probs=118.0
Q ss_pred ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCC
Q 010571 36 FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSD 115 (507)
Q Consensus 36 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 115 (507)
.++..++.|+.+ ..+.+||..++.-...-.. ......++..++.+++.|+.+.
T Consensus 141 ~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~------------------h~~~v~~l~~~~~~l~sg~~dg---- 193 (435)
T 1p22_A 141 YDDQKIVSGLRD-----NTIKIWDKNTLECKRILTG------------------HTGSVLCLQYDERVIITGSSDS---- 193 (435)
T ss_dssp CCSSEEEEEESS-----SCEEEEESSSCCEEEEECC------------------CSSCEEEEECCSSEEEEEETTS----
T ss_pred ECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEcC------------------CCCcEEEEEECCCEEEEEcCCC----
Confidence 366677777743 4688999987764332211 1122334444777888877542
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 195 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~ 195 (507)
.+.+||..++...... ........++.+.+..++.|+.+ ..+.+||+.+..-..... ........
T Consensus 194 --~i~vwd~~~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~--~~~~~~~~ 258 (435)
T 1p22_A 194 --TVRVWDVNTGEMLNTL-----IHHCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASPTDITLRR--VLVGHRAA 258 (435)
T ss_dssp --CEEEEESSSCCEEEEE-----CCCCSCEEEEECCTTEEEEEETT------SCEEEEECSSSSCCEEEE--EECCCSSC
T ss_pred --eEEEEECCCCcEEEEE-----cCCCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCCCCceeee--EecCCCCc
Confidence 3889999888654332 11112223334455566667653 358889987654321110 00111112
Q ss_pred ceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEE
Q 010571 196 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLN 275 (507)
Q Consensus 196 ~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d 275 (507)
..++...++ .++.|+.+ ..+.+||+.+..-...- ........++.+++.+++.|+.++ .+.+||
T Consensus 259 v~~~~~~~~-~l~s~~~d-----g~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd 322 (435)
T 1p22_A 259 VNVVDFDDK-YIVSASGD-----RTIKVWNTSTCEFVRTL-----NGHKRGIACLQYRDRLVVSGSSDN-----TIRLWD 322 (435)
T ss_dssp EEEEEEETT-EEEEEETT-----SEEEEEETTTCCEEEEE-----ECCSSCEEEEEEETTEEEEEETTS-----CEEEEE
T ss_pred EEEEEeCCC-EEEEEeCC-----CeEEEEECCcCcEEEEE-----cCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEE
Confidence 233344455 55666654 46889998877543321 111122234445677777877543 478899
Q ss_pred cCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 276 MTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 276 ~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
+.+..-.. .+... ......+.+++ ..++.|+.+ ..+.++|+.
T Consensus 323 ~~~~~~~~--~~~~h------~~~v~~~~~~~--~~l~sg~~d----g~i~vwd~~ 364 (435)
T 1p22_A 323 IECGACLR--VLEGH------EELVRCIRFDN--KRIVSGAYD----GKIKVWDLV 364 (435)
T ss_dssp TTTCCEEE--EECCC------SSCEEEEECCS--SEEEEEETT----SCEEEEEHH
T ss_pred CCCCCEEE--EEeCC------cCcEEEEEecC--CEEEEEeCC----CcEEEEECC
Confidence 88764322 22111 11222333333 456667754 457777763
No 54
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.14 E-value=0.023 Score=56.11 Aligned_cols=228 Identities=10% Similarity=-0.030 Sum_probs=118.6
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
..|.+|+....-..+.... ..-.+.+.. ++..+++++..++ ...++++|+.++....+....
T Consensus 160 ~i~i~d~~g~~~~~l~~~~-----~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~---------- 222 (415)
T 2hqs_A 160 ELRVSDYDGYNQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFP---------- 222 (415)
T ss_dssp EEEEEETTSCSCEEEEEES-----SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEECCS----------
T ss_pred eEEEEcCCCCCCEEEeCCC-----CcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeecCC----------
Confidence 4567777655444443211 111122222 4455555554322 257999999998776544221
Q ss_pred CccCCCCCccceeeEEE--CC-EEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEE
Q 010571 83 GLLEVLPPMSDHCMVKW--GT-KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~ 157 (507)
. ....+.+ ++ .|++.+.... ...++++|+.++....+. ..+ .......+ +++.+++
T Consensus 223 -------~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~---~~~---~~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 223 -------R--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVT---DGR---SNNTEPTWFPDSQNLAF 283 (415)
T ss_dssp -------S--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECC---CCS---SCEEEEEECTTSSEEEE
T ss_pred -------C--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCc---CCC---CcccceEECCCCCEEEE
Confidence 1 1222333 44 4555544322 346999999998876554 111 11222233 4444444
Q ss_pred cCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeec
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
++.... ...++.+|+.+..-..+... ......++...++..+++++.... ...++++|+.++....+..
T Consensus 284 ~s~~~g---~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~- 352 (415)
T 2hqs_A 284 TSDQAG---RPQVYKVNINGGAPQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSS- 352 (415)
T ss_dssp EECTTS---SCEEEEEETTSSCCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCC-
T ss_pred EECCCC---CcEEEEEECCCCCEEEEecC-----CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecC-
Confidence 432211 34699999988775544311 112223333345545555554321 3579999999988866532
Q ss_pred CCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEecc
Q 010571 238 GDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 286 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~ 286 (507)
. . ....+.+ +++.+++++.... ...++++|+.......++.
T Consensus 353 -~---~--~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 353 -T---F--LDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp -S---S--SCEEEEECTTSSEEEEEEEETT--EEEEEEEETTSCCEEECCC
T ss_pred -C---C--CcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCCCcEEEeeC
Confidence 1 1 1122333 5666777664322 3478999988777666644
No 55
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.12 E-value=0.087 Score=50.07 Aligned_cols=235 Identities=13% Similarity=0.078 Sum_probs=109.6
Q ss_pred ceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEee
Q 010571 54 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVME 133 (507)
Q Consensus 54 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~ 133 (507)
.++.+|..++.+..+...... ..-...+..-+++||+.+... ....+++||+.++.++.+.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~---------------~~p~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g~~~~~~ 79 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT---------------QNPTYLALSAKDCLYSVDKED----DEGGIAAWQIDGQTAHKLN 79 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC---------------SCCCCEEECTTCEEEEEEEET----TEEEEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeecc---------------CCcceEEEccCCeEEEEEecC----CCceEEEEEecCCcEEEee
Confidence 377788888888775543210 111112222367777765421 1346999999888877665
Q ss_pred cCCCCCCCcccceEEEE-CC-EEEEEcCcCCCCCccCcEEEEEcC-CCcEEEee---cCCCCCCCCC----CceEEEEcC
Q 010571 134 TSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVE---VTQTPPAPRY----DHSAALHAN 203 (507)
Q Consensus 134 ~~g~~p~~r~~~~~~~~-~~-~l~~~GG~~~~~~~~~~~~~~d~~-t~~W~~~~---~~g~~p~~r~----~~~~~~~~~ 203 (507)
.. ......-..++.- ++ .||+.+.. .+.+.+|++. ++....+. ..+..|.+|. .+.++...+
T Consensus 80 ~~--~~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd 151 (347)
T 3hfq_A 80 TV--VAPGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD 151 (347)
T ss_dssp EE--EEESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT
T ss_pred ee--ecCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC
Confidence 21 0011111122222 33 56665432 2358888874 33443332 2222222221 223444456
Q ss_pred cEEEEEeCCCCCcCCCcEEEEECC-CCcEEeeeecCCCCCCCcceEEEEE--CCE-EEEEeccCCCCCcceEEEEEcC--
Q 010571 204 RYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGHAGITI--DEN-WYIVGGGDNNNGCQETIVLNMT-- 277 (507)
Q Consensus 204 ~~l~i~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~d~~~~d~~-- 277 (507)
+.+|+.+... +.+++|++. ++....+... ..+.. .....+.+ +++ +|+.+... +.+.+|+..
T Consensus 152 g~l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~-~~~~g-~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~ 219 (347)
T 3hfq_A 152 NRLAVIDLGS-----DKVYVYNVSDAGQLSEQSVL-TMEAG-FGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQ 219 (347)
T ss_dssp SCEEEEETTT-----TEEEEEEECTTSCEEEEEEE-ECCTT-CCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETT
T ss_pred CcEEEEeCCC-----CEEEEEEECCCCcEEEeeeE-EcCCC-CCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCC
Confidence 6666654332 468899987 5555543211 11111 11122333 444 66654322 234555544
Q ss_pred cCeeEEeccCCCCCCCCCCCCceE-EEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 278 KLAWSILTSVKGRNPLASEGLSVC-SAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 278 ~~~W~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
+..+..+................. ....+++.+||+.+.. .+.+.+|++.
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~----~~~v~v~~~~ 270 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG----YNTLAVFAVT 270 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET----TTEEEEEEEC
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC----CCEEEEEEEC
Confidence 566654433221110000111222 3334445567776543 2457777764
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.09 E-value=0.087 Score=50.27 Aligned_cols=150 Identities=11% Similarity=0.101 Sum_probs=78.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 115 (507)
++.+++.|+.+ ..+.+||+.++.+..+.....- ...-.+++.. ++.+++.|+.+
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~l~~~~~d----- 73 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEH---------------NGQVTGVDWAPDSNRIVTCGTD----- 73 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECC---------------SSCEEEEEEETTTTEEEEEETT-----
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCC---------------CCcccEEEEeCCCCEEEEEcCC-----
Confidence 45666777632 4689999999877665544310 1111122222 56666676643
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCc-EEEeecCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~g~~p~~ 192 (507)
..+.+||..++.+..... .........++.+ ++..++.|+.+ ..+.+||+.+.. |...... ..+..
T Consensus 74 -g~i~vwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~-~~~~~ 142 (372)
T 1k8k_C 74 -RNAYVWTLKGRTWKPTLV---ILRINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHI-KKPIR 142 (372)
T ss_dssp -SCEEEEEEETTEEEEEEE---CCCCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEE-CTTCC
T ss_pred -CeEEEEECCCCeeeeeEE---eecCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeee-ecccC
Confidence 238888988888765542 1111122223333 45566666643 347777776544 3333211 11112
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECC
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~ 227 (507)
..-.+++...++.+++.|+.+ ..+.+||+.
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~ 172 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCD-----FKCRIFSAY 172 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEECC
T ss_pred CCeeEEEEcCCCCEEEEEcCC-----CCEEEEEcc
Confidence 222233444455577777754 457888854
No 57
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.06 E-value=0.055 Score=51.45 Aligned_cols=278 Identities=13% Similarity=0.106 Sum_probs=128.7
Q ss_pred CeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCC
Q 010571 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSG 83 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~ 83 (507)
+|.+|+.+..+..+....... .-..++.. ++.||+.+... ....+++||+.++.+..+......
T Consensus 20 v~~~d~~tg~~~~~~~~~~~~---~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~--------- 84 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAATQ---NPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAP--------- 84 (347)
T ss_dssp EEEEETTTTEEEEEEEEEECS---CCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEE---------
T ss_pred EEEEcCCCCeEEEeeeeeccC---CcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecC---------
Confidence 678888888887754211111 11223333 56677765421 124689999988887766542210
Q ss_pred ccCCCCCccceeeEEEC-CEEEEEcccCCCCCCcceEEEEECC-CCcEEEee---cCCCCCCCcc---cceEEEE--CCE
Q 010571 84 LLEVLPPMSDHCMVKWG-TKLLILGGHYKKSSDSMIVRFIDLE-TNLCGVME---TSGKVPVARG---GHSVTLV--GSR 153 (507)
Q Consensus 84 ~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~-t~~W~~~~---~~g~~p~~r~---~~~~~~~--~~~ 153 (507)
.....+.+..-+ ..||+.+.. ...+.+|++. ++....+. ..+..|.+|. ....+.+ +++
T Consensus 85 -----~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 85 -----GTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp -----SCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred -----CCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 011122222334 456665421 2347777764 44444332 1222222221 1122333 456
Q ss_pred EEEEcCcCCCCCccCcEEEEEcC-CCcEEEeecCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECC--CC
Q 010571 154 LIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQ--TN 229 (507)
Q Consensus 154 l~~~GG~~~~~~~~~~~~~~d~~-t~~W~~~~~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~--~~ 229 (507)
+|+.+.. .+.+.+||+. +++...+... ..+....-..++...++ .+|+.+..+ +.+.+|++. ++
T Consensus 154 l~v~~~~------~~~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g 221 (347)
T 3hfq_A 154 LAVIDLG------SDKVYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTG 221 (347)
T ss_dssp EEEEETT------TTEEEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTT
T ss_pred EEEEeCC------CCEEEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCC
Confidence 6665432 2468899987 5665544311 11111111223444454 467655432 345555544 56
Q ss_pred cEEeeeecCCCCCC---CcceEEEEE--CC-EEEEEeccCCCCCcceEEEEEcC-cCeeEEeccCCCCCCCCCCCCceEE
Q 010571 230 EWSQPEIKGDLVTG---RAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNMT-KLAWSILTSVKGRNPLASEGLSVCS 302 (507)
Q Consensus 230 ~W~~~~~~~~~p~~---r~~~~~~~~--~~-~l~v~GG~~~~~~~~d~~~~d~~-~~~W~~~~~~~~~~p~~~~~~~~~~ 302 (507)
.+..+......|.. ......+.+ ++ .||+.+..+ +.+.+|++. +..+..+..++... ......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~-----~~~~~~ 291 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-----NTLAVFAVTADGHLTLIQQISTEG-----DFPRDF 291 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-----TEEEEEEECGGGCEEEEEEEECSS-----SCCCEE
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-----CEEEEEEECCCCcEEEeEEEecCC-----CCcCeE
Confidence 66554322222221 122233444 34 466654322 357788875 33455544332210 011123
Q ss_pred EEEcCceEEEEEcccCCCcCCeEEEE--ECCCCC
Q 010571 303 AIIEGEHHLVAFGGYNGKYNNEVFVM--RLKPRD 334 (507)
Q Consensus 303 ~~~~~~~~l~v~GG~~~~~~~~v~~~--~~~~~~ 334 (507)
...+++.+|++.+..+ +.+.+| |..+..
T Consensus 292 ~~spdg~~l~v~~~~~----~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 292 DLDPTEAFVVVVNQNT----DNATLYARDLTSGK 321 (347)
T ss_dssp EECTTSSEEEEEETTT----TEEEEEEECTTTCC
T ss_pred EECCCCCEEEEEEcCC----CcEEEEEEeCCCCe
Confidence 3344455677655432 345555 554443
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.11 Score=49.67 Aligned_cols=191 Identities=12% Similarity=0.096 Sum_probs=98.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--C--CEEEEEcccCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.+||.....+..+..... ......++.+ + +.+++.|+.+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~~~l~s~~~dg- 79 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTG----------------HEGPVWRVDWAHPKFGTILASCSYDG- 79 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECC----------------CSSCEEEEEECCGGGCSEEEEEETTS-
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecC----------------CCCcEEEEEeCCCCCCCEEEEeccCC-
Confidence 45566666633 458888888777666554321 1122233333 2 56677776532
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--C--CEEEEEcCcCCCCCccCcEEEEEcCCCcE-EEeecCC
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETMTW-DAVEVTQ 187 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~l~~~GG~~~~~~~~~~~~~~d~~t~~W-~~~~~~g 187 (507)
.+.+||+.++.|..+.. .........++.+ + +.+++.|+.+ ..+.+||+.+..- ......+
T Consensus 80 -----~v~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 80 -----KVLIWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp -----CEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEEC
T ss_pred -----EEEEEEcCCCceeEeee---ecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecC
Confidence 38889999998877653 2222222233333 2 4566777653 3588888876532 1111111
Q ss_pred CCCCCCCCceEEEEc-------------CcEEEEEeCCCCCcCCCcEEEEECCCCc--EEeeeecCCCCCCCcceEEEEE
Q 010571 188 TPPAPRYDHSAALHA-------------NRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAGHAGITI 252 (507)
Q Consensus 188 ~~p~~r~~~~~~~~~-------------~~~l~i~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~ 252 (507)
. ...-.+++... ++.+++.|+.+ ..+.+||+.+.. +..+.. .........++.+
T Consensus 146 ~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~---~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 146 H---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLEST---LEGHSDWVRDVAW 214 (379)
T ss_dssp C---TTCEEEEEECCCC----------CTTCEEEEEETT-----SCEEEEEEETTTTEEEEEEE---ECCCSSCEEEEEE
T ss_pred C---CCceEEEEEcCccccccccccCCCCCCEEEEEeCC-----CeEEEEEecCCCcceeeEEE---EecccCcEeEEEE
Confidence 1 11112222222 35577777765 357788875543 444321 1111122223333
Q ss_pred --C---CEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 253 --D---ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 253 --~---~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
+ +.+++.|+.++ .+.+||+.+.
T Consensus 215 sp~~~~~~~l~s~~~dg-----~i~iwd~~~~ 241 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDR-----TCIIWTQDNE 241 (379)
T ss_dssp CCCCSSSEEEEEEETTS-----CEEEEEESST
T ss_pred CCCCCCCCeEEEEeCCC-----EEEEEeCCCC
Confidence 3 57777777554 3677887665
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.03 E-value=0.17 Score=49.34 Aligned_cols=218 Identities=16% Similarity=0.161 Sum_probs=112.1
Q ss_pred CceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEE
Q 010571 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 130 (507)
Q Consensus 53 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~ 130 (507)
..+.+||..++......... ......++.+ ++.+++.|+.+. .+.+||+.++...
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~-----------------~~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~ 169 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD-----------------ESTYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKL 169 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC-----------------TTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEE
T ss_pred CeEEEeeCCCCcEeEeeecC-----------------CCCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEE
Confidence 46999999998876554432 1112223333 566666766432 4889999887644
Q ss_pred EeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEe
Q 010571 131 VMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 131 ~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~G 210 (507)
... . .......++..++.+++.|+.+ ..+..+|+.+..-......+ ....-.++....++.+++.|
T Consensus 170 ~~~---~--~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 170 RTM---A--GHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQG---HSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp EEE---C--CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEE
T ss_pred EEe---c--CCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcC---CCCCeeEEEEcCCCCEEEEE
Confidence 332 1 1112223334466677777653 36889998743322221111 11112233344455577777
Q ss_pred CCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE---CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccC
Q 010571 211 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 211 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~ 287 (507)
+.+ ..+.+||+.+..-...- . .......++.+ +..+++.||...+ ..+.+||+.+..-...-..
T Consensus 236 ~~d-----~~v~iwd~~~~~~~~~~--~---~~~~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~~~~~~~~~~ 302 (401)
T 4aez_A 236 GND-----NVVQIWDARSSIPKFTK--T---NHNAAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAATGARVNTVDA 302 (401)
T ss_dssp ETT-----SCEEEEETTCSSEEEEE--C---CCSSCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTTCCEEEEEEC
T ss_pred eCC-----CeEEEccCCCCCccEEe--c---CCcceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCCCCEEEEEeC
Confidence 764 46889999876543311 1 11111122333 3467777753222 2588899877654332111
Q ss_pred CCCCCCCCCCCceEEEE-EcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 288 KGRNPLASEGLSVCSAI-IEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 288 ~~~~p~~~~~~~~~~~~-~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
+.....+. .+++..|++.+|.. ...+.+|++..
T Consensus 303 ---------~~~v~~~~~s~~~~~l~~~~g~~---dg~i~v~~~~~ 336 (401)
T 4aez_A 303 ---------GSQVTSLIWSPHSKEIMSTHGFP---DNNLSIWSYSS 336 (401)
T ss_dssp ---------SSCEEEEEECSSSSEEEEEECTT---TCEEEEEEEET
T ss_pred ---------CCcEEEEEECCCCCeEEEEeecC---CCcEEEEecCC
Confidence 11222333 34445666655533 24567777644
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.02 E-value=0.25 Score=47.03 Aligned_cols=229 Identities=12% Similarity=0.081 Sum_probs=108.1
Q ss_pred CCCeEeeCCCCCeEEeccCCCCC-CccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARP-SPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~ 80 (507)
..+.+||+....|..+.. +. ....-.+++.. ++.+++.|+.+ ..+.+||+.++.+........
T Consensus 30 ~~v~i~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~------- 94 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHE---LKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVILR------- 94 (372)
T ss_dssp SEEEEEEEETTEEEEEEE---EECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEEEEECCC-------
T ss_pred CEEEEEeCCCCcEEeeee---ecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeeeeEEeec-------
Confidence 345677887776654442 11 11111223333 45566666633 458899998888765543221
Q ss_pred cCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCc-EEEeecCCCCCCCcccceEEEE--CCEEE
Q 010571 81 DSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPVARGGHSVTLV--GSRLI 155 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~l~ 155 (507)
.......+.+ ++.+++.|+.+. .+.+||..+.. |...... ..+.. ....++.+ ++..+
T Consensus 95 ---------~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~-~~~~~-~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 95 ---------INRAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHI-KKPIR-STVLSLDWHPNSVLL 157 (372)
T ss_dssp ---------CSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEE-CTTCC-SCEEEEEECTTSSEE
T ss_pred ---------CCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeee-ecccC-CCeeEEEEcCCCCEE
Confidence 1112222333 456666666432 25566655543 3322210 11111 11222233 45667
Q ss_pred EEcCcCCCCCccCcEEEEEcC------------------CCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcC
Q 010571 156 IFGGEDRSRKLLNDVHFLDLE------------------TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIF 217 (507)
Q Consensus 156 ~~GG~~~~~~~~~~~~~~d~~------------------t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~ 217 (507)
+.|+.+ ..+..||+. +..-...- . .....-.+++...++.+++.|+.+
T Consensus 158 ~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~v~~~~~~~~~~~l~~~~~d---- 223 (372)
T 1k8k_C 158 AAGSCD------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES---S-SSCGWVHGVCFSANGSRVAWVSHD---- 223 (372)
T ss_dssp EEEETT------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC---C-CCSSCEEEEEECSSSSEEEEEETT----
T ss_pred EEEcCC------CCEEEEEcccccccccccccccccccchhhheEec---C-CCCCeEEEEEECCCCCEEEEEeCC----
Confidence 777653 358888854 22211111 0 111111223333455466666654
Q ss_pred CCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCc--CeeEEeccC
Q 010571 218 FNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK--LAWSILTSV 287 (507)
Q Consensus 218 ~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~--~~W~~~~~~ 287 (507)
..+.+||+.+..-...-. + ...........-++.+++.| .++ .+.+|++.+ ..|..+..+
T Consensus 224 -~~i~i~d~~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l~~~-~d~-----~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 224 -STVCLADADKKMAVATLA-S--ETLPLLAVTFITESSLVAAG-HDC-----FPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp -TEEEEEEGGGTTEEEEEE-C--SSCCEEEEEEEETTEEEEEE-TTS-----SCEEEEEETTTTEEEECCCC
T ss_pred -CEEEEEECCCCceeEEEc-c--CCCCeEEEEEecCCCEEEEE-eCC-----eEEEEEccCcCceEEEeecc
Confidence 458899987765433211 1 11111111222356666555 332 356777777 888776444
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.01 E-value=0.2 Score=46.78 Aligned_cols=186 Identities=16% Similarity=0.085 Sum_probs=96.2
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++++++.|+.+ ..+.+||+.+........ .........++.+ ++..++.|+.+ ..+..||+.+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCC
Confidence 45666666542 358899998887544331 1111111222223 44566666643 3599999988
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN 255 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 255 (507)
.+....-. . ....-.+++...++..++.|+.+ ..+.+||+.+..-..... . +... ..+.+ ++.
T Consensus 173 ~~~~~~~~---~-~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~---~--~~~v-~~~~~s~~~~ 237 (337)
T 1gxr_A 173 QTLVRQFQ---G-HTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHD---F--TSQI-FSLGYCPTGE 237 (337)
T ss_dssp TEEEEEEC---C-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEE---C--SSCE-EEEEECTTSS
T ss_pred Cceeeeee---c-ccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeec---C--CCce-EEEEECCCCC
Confidence 76544321 1 11112233344455566677654 468999998775443211 1 1111 22233 456
Q ss_pred EEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 256 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 256 l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
.+++|+.++ .+.+||+.+..-..+... ......+.+..+..+++.|+.+ ..+..+++...
T Consensus 238 ~l~~~~~~~-----~i~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~ 297 (337)
T 1gxr_A 238 WLAVGMESS-----NVEVLHVNKPDKYQLHLH---------ESCVLSLKFAYCGKWFVSTGKD----NLLNAWRTPYG 297 (337)
T ss_dssp EEEEEETTS-----CEEEEETTSSCEEEECCC---------SSCEEEEEECTTSSEEEEEETT----SEEEEEETTTC
T ss_pred EEEEEcCCC-----cEEEEECCCCCeEEEcCC---------ccceeEEEECCCCCEEEEecCC----CcEEEEECCCC
Confidence 777776433 478899887653333211 1123333444333456666654 46788887654
No 62
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.99 E-value=0.26 Score=46.95 Aligned_cols=279 Identities=9% Similarity=0.034 Sum_probs=123.9
Q ss_pred CeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCce--EEEECCCCceeEeeeccccccCccc
Q 010571 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDV--QVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~--~~~d~~t~~W~~~~~~~~~~~~~~~ 80 (507)
+|.+|+.+..++.+... ....-+.++.. +..||+.+..... ...+ |.++..++....+......
T Consensus 31 ~~~~d~~~g~~~~~~~~----~~~~p~~l~~spdg~~l~~~~~~~~~--~~~v~~~~~~~~~g~~~~~~~~~~~------ 98 (361)
T 3scy_A 31 TFRFNEETGESLPLSDA----EVANPSYLIPSADGKFVYSVNEFSKD--QAAVSAFAFDKEKGTLHLLNTQKTM------ 98 (361)
T ss_dssp EEEEETTTCCEEEEEEE----ECSCCCSEEECTTSSEEEEEECCSST--TCEEEEEEEETTTTEEEEEEEEECS------
T ss_pred EEEEeCCCCCEEEeecc----cCCCCceEEECCCCCEEEEEEccCCC--CCcEEEEEEeCCCCcEEEeeEeccC------
Confidence 45677788888877642 11111223333 4457766553211 2334 5556666777666543210
Q ss_pred cCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc-EE----EeecCCCCCCC----ccc-ceEEEE
Q 010571 81 DSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL-CG----VMETSGKVPVA----RGG-HSVTLV 150 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W~----~~~~~g~~p~~----r~~-~~~~~~ 150 (507)
...-+.++.-++.||+.+.. ...+.+|++.+.. .. .....+..|.+ ... ++++.-
T Consensus 99 ---------~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 99 ---------GADPCYLTTNGKNIVTANYS------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp ---------SSCEEEEEECSSEEEEEETT------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred ---------CCCcEEEEECCCEEEEEECC------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 11112223334456655421 2347788875432 11 11111222211 111 223322
Q ss_pred -CC-EEEEEcCcCCCCCccCcEEEEEcCCCc-------EEEe---ecCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcC
Q 010571 151 -GS-RLIIFGGEDRSRKLLNDVHFLDLETMT-------WDAV---EVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIF 217 (507)
Q Consensus 151 -~~-~l~~~GG~~~~~~~~~~~~~~d~~t~~-------W~~~---~~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~ 217 (507)
++ .+|+.+.. .+.+.+|++.... .... ... ..+....-..++...++ .+|+.+..+
T Consensus 164 pdg~~l~~~~~~------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~~---- 232 (361)
T 3scy_A 164 PDGKYLLADDLG------TDQIHKFNINPNANADNKEKFLTKGTPEAF-KVAPGSGPRHLIFNSDGKFAYLINEIG---- 232 (361)
T ss_dssp TTSSEEEEEETT------TTEEEEEEECTTCCTTTCCCCEEEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTT----
T ss_pred CCCCEEEEEeCC------CCEEEEEEEcCCCCcccccceeecccccce-ecCCCCCCeEEEEcCCCCEEEEEcCCC----
Confidence 34 57765432 3357778766443 2111 000 11111111234444454 566655322
Q ss_pred CCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE-EEEEeccCCCCCcceEEEEEc--CcCeeEEeccCCCCCC
Q 010571 218 FNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN-WYIVGGGDNNNGCQETIVLNM--TKLAWSILTSVKGRNP 292 (507)
Q Consensus 218 ~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~d~~~~d~--~~~~W~~~~~~~~~~p 292 (507)
+.+.+|++.++.+..+......+........+.+ +++ ||+.+... .+.+.+|++ .+..+..+...+..
T Consensus 233 -~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~----~~~i~v~~~~~~~g~~~~~~~~~~g-- 305 (361)
T 3scy_A 233 -GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK----ADGVAIFKVDETNGTLTKVGYQLTG-- 305 (361)
T ss_dssp -CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS----SCEEEEEEECTTTCCEEEEEEEECS--
T ss_pred -CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC----CCEEEEEEEcCCCCcEEEeeEecCC--
Confidence 5688999888777654432233332223334444 444 55543220 124556655 46677665544321
Q ss_pred CCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 293 LASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
.........+++.+|++.+..++ .-.+|.+|+.+..
T Consensus 306 ----~~~~~~~~spdg~~l~~~~~~~~--~v~v~~~d~~~g~ 341 (361)
T 3scy_A 306 ----IHPRNFIITPNGKYLLVACRDTN--VIQIFERDQATGL 341 (361)
T ss_dssp ----SCCCEEEECTTSCEEEEEETTTT--EEEEEEECTTTCC
T ss_pred ----CCCceEEECCCCCEEEEEECCCC--CEEEEEEECCCCc
Confidence 11112333444556666553321 2234556655443
No 63
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.99 E-value=0.49 Score=49.95 Aligned_cols=132 Identities=18% Similarity=0.142 Sum_probs=74.4
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcc
Q 010571 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGG 108 (507)
Q Consensus 31 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG 108 (507)
.+-++.++.||+.+. ...++.+|..|++ |+.-...... .. ..........+.++.+++||+...
T Consensus 64 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~----~~----~~~~~~~~~~~~~~~~g~v~v~~~ 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRH----RA----GEACCDAVNRGVAVWKGKVYVGVL 129 (689)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGG----GG----GGCTTCSCCCCCEEETTEEEEECT
T ss_pred ecCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCcc----cc----ccccccCCCCccEEECCEEEEEcc
Confidence 444567999999765 3469999999874 8764322110 00 000000112234567888888642
Q ss_pred cCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCc--EEEee
Q 010571 109 HYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVE 184 (507)
Q Consensus 109 ~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~--W~~~~ 184 (507)
...++.+|..|++ |+...............+.++.++.+|+-.+... ......++.||..|++ |+.-.
T Consensus 130 -------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 130 -------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp -------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEES
T ss_pred -------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEecc
Confidence 2358999998874 8765420111111222334556888877432211 1124579999999876 87653
No 64
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.93 E-value=0.13 Score=46.96 Aligned_cols=229 Identities=10% Similarity=0.034 Sum_probs=113.6
Q ss_pred CCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCC-CcEE
Q 010571 52 LSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLET-NLCG 130 (507)
Q Consensus 52 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t-~~W~ 130 (507)
...++++|+.++....+.... .........-+++.+++++ ...++++|+.+ +...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----------------~~v~~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----------------ELFEAPNWSPDGKYLLLNS-------EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----------------SCCEEEEECTTSSEEEEEE-------TTEEEEEESSSCCSCE
T ss_pred ceeEEEEeCCCCceeeeccCC-----------------cceEeeEECCCCCEEEEEc-------CCeEEEEeCCCCCCce
Confidence 457999999998876554322 1111222222555555554 12599999998 7766
Q ss_pred EeecCCCCCCCcccceEEE-ECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCc-EEEE
Q 010571 131 VMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANR-YLIV 208 (507)
Q Consensus 131 ~~~~~g~~p~~r~~~~~~~-~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~-~l~i 208 (507)
.+. ..+....-..++. -++..+++++.... ....++.+++.+..-..+... . . ...+....++ .|++
T Consensus 77 ~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~---~-~--~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 77 KVD---TGFATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKN---L-P--SYWHGWSPDGKSFTY 145 (297)
T ss_dssp ECC---CTTCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSS---S-S--EEEEEECTTSSEEEE
T ss_pred Eec---cccccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecC---C-C--ccceEECCCCCEEEE
Confidence 554 2221111112222 24455555553222 245799999887775554321 1 1 2223333344 3444
Q ss_pred EeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEecc
Q 010571 209 FGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 286 (507)
Q Consensus 209 ~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~ 286 (507)
.++.++ ...+|.+++.+.....+.. . + .....+.+ ++..+++++... ....+|.+++.......+..
T Consensus 146 ~~~~~~---~~~l~~~~~~~~~~~~~~~---~--~-~~~~~~~~s~dg~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 146 CGIRDQ---VFDIYSMDIDSGVETRLTH---G--E-GRNDGPDYSPDGRWIYFNSSRT--GQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEEETT---EEEEEEEETTTCCEEECCC---S--S-SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCEEECCC
T ss_pred EECCCC---ceEEEEEECCCCcceEccc---C--C-CccccceECCCCCEEEEEecCC--CCccEEEECCCCCCcEEEec
Confidence 444332 1367888887777665421 1 1 11122333 455444443211 23468888877766655432
Q ss_pred CCCCCCCCCCCCceEEEEE-cCceEEEEEcccCCC------cCCeEEEEECCCCCC
Q 010571 287 VKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGK------YNNEVFVMRLKPRDI 335 (507)
Q Consensus 287 ~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~------~~~~v~~~~~~~~~w 335 (507)
. ......+.. +++..|++.+...+. ....++.+|+.....
T Consensus 215 ~---------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 215 S---------AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp C---------SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred C---------CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 2 112222333 344444444332211 235689999876543
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.12 Score=50.21 Aligned_cols=144 Identities=11% Similarity=0.018 Sum_probs=73.6
Q ss_pred CEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCc
Q 010571 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 101 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~ 179 (507)
+..++.|+.. ..+.+||+.+..-.... .... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 217 ~~~~~~~~~~------g~i~~~d~~~~~~~~~~---~~~~-~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~ 280 (425)
T 1r5m_A 217 DDKFVIPGPK------GAIFVYQITEKTPTGKL---IGHH-GPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGN 280 (425)
T ss_dssp TTEEEEECGG------GCEEEEETTCSSCSEEE---CCCS-SCEEEEEEETTTTEEEEEETT------SCEEEECSSSBS
T ss_pred CCEEEEEcCC------CeEEEEEcCCCceeeee---ccCC-CceEEEEECCCCCEEEEEcCC------CEEEEEECCCCc
Confidence 3445566543 34889998876432221 1111 111222222 44566666643 358889887654
Q ss_pred EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEE
Q 010571 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWY 257 (507)
Q Consensus 180 W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~ 257 (507)
....-. .....-.+++...++ +++.|+.+ ..+.+||+.+..-..... . .......+.+ ++.++
T Consensus 281 ~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~-~----~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 281 SQNCFY----GHSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALSI-V----DGVPIFAGRISQDGQKY 345 (425)
T ss_dssp CSEEEC----CCSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEEE-C----TTCCEEEEEECTTSSEE
T ss_pred cceEec----CCCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEecc-c----CCccEEEEEEcCCCCEE
Confidence 332221 111222344455666 66666654 468999998766443211 1 1111223333 45677
Q ss_pred EEeccCCCCCcceEEEEEcCcCe
Q 010571 258 IVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 258 v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
+.|+.++ .+.+||+.+..
T Consensus 346 ~~~~~dg-----~i~i~~~~~~~ 363 (425)
T 1r5m_A 346 AVAFMDG-----QVNVYDLKKLN 363 (425)
T ss_dssp EEEETTS-----CEEEEECHHHH
T ss_pred EEEECCC-----eEEEEECCCCc
Confidence 7776443 47788876654
No 66
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.89 E-value=0.27 Score=47.23 Aligned_cols=205 Identities=7% Similarity=-0.050 Sum_probs=98.5
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CC-EEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~-~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
...++++|+.++....+.. . .......... ++ .|++... +........++.+|+.+..+..+.. ..+ .
T Consensus 167 ~~~l~~~d~~~g~~~~~~~---~--~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~--~~~-~ 237 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQ---D--TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE--HAE-G 237 (396)
T ss_dssp CEEEEEEETTTCCEEEEEE---E--SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC--CCT-T
T ss_pred cceEEEEECCCCcEEeecc---C--CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec--cCC-C
Confidence 4579999999988776652 1 1111122222 23 3544432 2111123579999998887766642 101 1
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCC-------
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDN------- 264 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~------- 264 (507)
..........++..+++...........++++|+.++....+.. .+ ... ....- +++++++.+...
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV---MP--PCS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE---CC--SEE-EEEECSSSSEEEEEECCC-------
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee---CC--CCC-CCccCCCCceEEEecCCcceeeccc
Confidence 11112233344433334332222212349999998887766532 12 111 22233 566666644221
Q ss_pred ----CCCcceEEEEEcCcCeeEEeccCCCCCC---CCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCCCCC
Q 010571 265 ----NNGCQETIVLNMTKLAWSILTSVKGRNP---LASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIPR 337 (507)
Q Consensus 265 ----~~~~~d~~~~d~~~~~W~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~w~~ 337 (507)
......++++|+.+.....+...+...- ..+..........+++..|+......+ ...+|.+++....+..
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~--~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG--VPAIYIADVPESYKHL 389 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS--SCEEEEEECCTTCC--
T ss_pred cccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC--CceEEEEEEccccccc
Confidence 1123579999998877665543321000 000000111122334445554443332 4579999987765544
No 67
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.89 E-value=0.2 Score=52.87 Aligned_cols=129 Identities=16% Similarity=0.133 Sum_probs=74.9
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCccccCCccCCC---CCccceeeEEECCEEEE
Q 010571 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVL---PPMSDHCMVKWGTKLLI 105 (507)
Q Consensus 31 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p---~~r~~~~~~~~~~~iyv 105 (507)
.+.++.++.||+... .+.++.+|..|++ |+.-...... ..+ ......+.+..+++||+
T Consensus 71 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-----------~~~~~~~~~~~~~~a~~~~~v~v 133 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRS-----------TGFKGCCDVVNRGVALWKGKVYV 133 (677)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGG-----------GGGGSSSCSCCCCCEEETTEEEE
T ss_pred eCCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCcc-----------ccccccccCCCCCceEECCEEEE
Confidence 445667999999865 3569999999884 8764432210 000 00122345667888888
Q ss_pred EcccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCc--EE
Q 010571 106 LGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WD 181 (507)
Q Consensus 106 ~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~--W~ 181 (507)
... ...++.+|..|++ |+...............+.++.++.+|+..+... ......++.||..|++ |+
T Consensus 134 ~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 134 GAW-------DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ECT-------TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEE
T ss_pred EcC-------CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEE
Confidence 642 2359999998874 7765310011111122234456788776543222 1124579999998876 87
Q ss_pred Eee
Q 010571 182 AVE 184 (507)
Q Consensus 182 ~~~ 184 (507)
.-.
T Consensus 206 ~~~ 208 (677)
T 1kb0_A 206 WFS 208 (677)
T ss_dssp EES
T ss_pred ecc
Confidence 654
No 68
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.88 E-value=0.098 Score=53.83 Aligned_cols=272 Identities=15% Similarity=0.107 Sum_probs=139.2
Q ss_pred CCCeEeeCCCCCeE-EeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECC--CCcee-Eeeecccccc
Q 010571 3 SGSWHLELPYDLWV-TLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLR--SLAWS-NLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~--t~~W~-~~~~~~~~~~ 76 (507)
+.++.+|+.+.+-. +++ ....-|.+++. +..+|+.+. ...+.+||+. +.+-. .++. +
T Consensus 177 ~~V~viD~~t~~v~~~i~------~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~~v~~i~~-G---- 239 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLD------TGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPTTVAEIKI-G---- 239 (567)
T ss_dssp TEEEEEETTTCCEEEEEE------CSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCCEEEEEEC-C----
T ss_pred CeEEEEECCCCeEEEEEe------CCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCcEeEEEec-C----
Confidence 44678888776544 233 22233444444 567787642 2469999995 54321 2221 1
Q ss_pred CccccCCccCCCCCccceeeEE----EC-CEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCC--------CCCcc
Q 010571 77 DKTEDSGLLEVLPPMSDHCMVK----WG-TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV--------PVARG 143 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~----~~-~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~--------p~~r~ 143 (507)
..-.+.+.. .+ ..+|+..-. .+.+.+||..|.+=....+.+.+ |.+|.
T Consensus 240 -------------~~P~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 240 -------------SEARSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp -------------SEEEEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred -------------CCCceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCce
Confidence 111122333 13 456665432 34578889877654433222221 12232
Q ss_pred cceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcCCCcEE
Q 010571 144 GHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLH 222 (507)
Q Consensus 144 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~ 222 (507)
....+..++..+++--. ..+.++++|..+.....+.. .+..+.-|.+....++ ++|+... ..|.+.
T Consensus 301 a~i~~s~~~~~~vv~~~-----~~g~v~~vd~~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ 367 (567)
T 1qks_A 301 AAILASHYRPEFIVNVK-----ETGKILLVDYTDLNNLKTTE---ISAERFLHDGGLDGSHRYFITAAN-----ARNKLV 367 (567)
T ss_dssp EEEEECSSSSEEEEEET-----TTTEEEEEETTCSSEEEEEE---EECCSSEEEEEECTTSCEEEEEEG-----GGTEEE
T ss_pred EEEEEcCCCCEEEEEec-----CCCeEEEEecCCCccceeee---eeccccccCceECCCCCEEEEEeC-----CCCeEE
Confidence 22122222333333211 24578889987766544442 2334555665555554 3444332 237899
Q ss_pred EEECCCCcEEeeeec-CCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcC-----eeEEeccCCCCCCCC
Q 010571 223 VLDLQTNEWSQPEIK-GDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKL-----AWSILTSVKGRNPLA 294 (507)
Q Consensus 223 ~~d~~~~~W~~~~~~-~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~-----~W~~~~~~~~~~p~~ 294 (507)
++|+.++.-...-.. +..|.|..+.. ... .+.+|+.+-.. ...+.++|..+. .|+.+..++...
T Consensus 368 ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g--- 439 (567)
T 1qks_A 368 VIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFPALG--- 439 (567)
T ss_dssp EEETTTTEEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSC---
T ss_pred EEECCCCcEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEecCC---
Confidence 999999875443334 55566544433 233 24677654211 125778887763 387765554321
Q ss_pred CCCCceEEEEEcCceEEEEEcccCC--CcCCeEEEEECCCC
Q 010571 295 SEGLSVCSAIIEGEHHLVAFGGYNG--KYNNEVFVMRLKPR 333 (507)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~v~GG~~~--~~~~~v~~~~~~~~ 333 (507)
+.++.....++..++||---.+. ...+.|.+||+.+.
T Consensus 440 --~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 440 --GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp --SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred --CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 12233334566678888542221 13568999998765
No 69
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.87 E-value=0.31 Score=45.92 Aligned_cols=239 Identities=11% Similarity=-0.002 Sum_probs=121.1
Q ss_pred CCEEEEEcCCCC-CccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCC
Q 010571 37 DQKLYIVGGSRN-GRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKS 113 (507)
Q Consensus 37 ~~~lyv~GG~~~-~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 113 (507)
++.+|+...... ......++++|+.+++....-..+ .. -+.++.. ++.+|+.++.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-----------------~~-~~~~~~s~dg~~l~v~~~~---- 109 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-----------------LK-PFGATINNTTQTLWFGNTV---- 109 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-----------------SC-CCSEEEETTTTEEEEEETT----
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-----------------CC-cceEEECCCCCEEEEEecC----
Confidence 457777653211 112457999999988654433222 11 1223322 3567777653
Q ss_pred CCcceEEEEECCCCcEEEeecCCCCCCC-----cccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecC
Q 010571 114 SDSMIVRFIDLETNLCGVMETSGKVPVA-----RGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVT 186 (507)
Q Consensus 114 ~~~~~~~~~d~~t~~W~~~~~~g~~p~~-----r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~ 186 (507)
...+.+||+.+++-......+....+ ..-..++.- ++.+|+.+... .+.++.||+.+.+-...-..
T Consensus 110 --~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 110 --NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp --TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECC
T ss_pred --CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecC
Confidence 23699999998875333221111110 011223332 34677765321 23599999988765443320
Q ss_pred CCCCCCCCCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--C-CEEEEEecc
Q 010571 187 QTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--D-ENWYIVGGG 262 (507)
Q Consensus 187 g~~p~~r~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~ 262 (507)
.....+.++...+ +.+|+... .+.++++|+.+..-......+.. .+......+.+ + +.+|+.+..
T Consensus 183 ----~~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 183 ----TGKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDD-GKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp ----CCTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCS-SSCCCEEEEEEETTTTEEEEEESS
T ss_pred ----CCCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCC-CCCcccceEEECCCCCEEEEEeCC
Confidence 1111233444444 45665433 25788999988764432211111 12222222333 3 346655432
Q ss_pred CCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 263 DNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 263 ~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
.+.+++||+.+.........+. + ......+++..+|+.+.. .+.+.++|+.+.
T Consensus 252 -----~~~v~~~d~~~~~~~~~~~~~~--~-------~~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~ 304 (353)
T 3vgz_A 252 -----AAEVLVVDTRNGNILAKVAAPE--S-------LAVLFNPARNEAYVTHRQ----AGKVSVIDAKSY 304 (353)
T ss_dssp -----SSEEEEEETTTCCEEEEEECSS--C-------CCEEEETTTTEEEEEETT----TTEEEEEETTTT
T ss_pred -----CCEEEEEECCCCcEEEEEEcCC--C-------ceEEECCCCCEEEEEECC----CCeEEEEECCCC
Confidence 2468999998876544322221 1 123344555667776543 257888888654
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.86 E-value=0.087 Score=50.33 Aligned_cols=200 Identities=13% Similarity=0.163 Sum_probs=101.2
Q ss_pred CEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--C--CEEEEEcccCCCC
Q 010571 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKKS 113 (507)
Q Consensus 38 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~ 113 (507)
+.+++.|+.+ ..+.+||+.++.|..+..... ......++.+ + +.+++.|+.+
T Consensus 69 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~~~l~~~~~d--- 124 (379)
T 3jrp_A 69 GTILASCSYD-----GKVLIWKEENGRWSQIAVHAV----------------HSASVNSVQWAPHEYGPLLLVASSD--- 124 (379)
T ss_dssp CSEEEEEETT-----SCEEEEEEETTEEEEEEEECC----------------CSSCEEEEEECCGGGCSEEEEEETT---
T ss_pred CCEEEEeccC-----CEEEEEEcCCCceeEeeeecC----------------CCcceEEEEeCCCCCCCEEEEecCC---
Confidence 5666676643 458899999998877665431 1122233333 3 5566776643
Q ss_pred CCcceEEEEECCCCcEE-EeecCCCCCCCcccceEEEE--------------CCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 114 SDSMIVRFIDLETNLCG-VMETSGKVPVARGGHSVTLV--------------GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 114 ~~~~~~~~~d~~t~~W~-~~~~~g~~p~~r~~~~~~~~--------------~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
..+.+||+.+..-. ..... ..+.+ -.+++.. ++.+++.|+.+. .+.+||+.+.
T Consensus 125 ---~~i~v~d~~~~~~~~~~~~~-~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~ 192 (379)
T 3jrp_A 125 ---GKVSVVEFKENGTTSPIIID-AHAIG--VNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSD 192 (379)
T ss_dssp ---SEEEEEECCTTSCCCEEEEE-CCTTC--EEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETT
T ss_pred ---CcEEEEecCCCCceeeEEec-CCCCc--eEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCC
Confidence 34888888776321 11100 00111 1112221 356777777543 5888887654
Q ss_pred c--EEEeecCCCCCCCCCCceEEEEcC---cEEEEEeCCCCCcCCCcEEEEECCCCc--EEeeeecCCCCCCCcceEEEE
Q 010571 179 T--WDAVEVTQTPPAPRYDHSAALHAN---RYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAGHAGIT 251 (507)
Q Consensus 179 ~--W~~~~~~g~~p~~r~~~~~~~~~~---~~l~i~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~ 251 (507)
. +........ ....-.+++...+ +.+++.|+.+ ..+.+||+.+.. +.... ..... .......+.
T Consensus 193 ~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~-~~~~~-~~~~v~~~~ 263 (379)
T 3jrp_A 193 AQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIWTQDNEQGPWKKTL-LKEEK-FPDVLWRAS 263 (379)
T ss_dssp TTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETT-----SCEEEEEESSTTSCCEEEE-SSSSC-CSSCEEEEE
T ss_pred CcceeeEEEEec--ccCcEeEEEECCCCCCCCeEEEEeCC-----CEEEEEeCCCCCccceeee-ecccc-CCCcEEEEE
Confidence 3 444332111 1111223344455 6677887765 357888877653 11111 01111 111122333
Q ss_pred E--CCEEEEEeccCCCCCcceEEEEEcC-cCeeEEeccC
Q 010571 252 I--DENWYIVGGGDNNNGCQETIVLNMT-KLAWSILTSV 287 (507)
Q Consensus 252 ~--~~~l~v~GG~~~~~~~~d~~~~d~~-~~~W~~~~~~ 287 (507)
+ ++.++++|+.++ .+.+|++. ...|..+..+
T Consensus 264 ~s~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 264 WSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEV 297 (379)
T ss_dssp ECSSSCCEEEEESSS-----SEEEEEEEETTEEEEEEEE
T ss_pred EcCCCCEEEEecCCC-----cEEEEeCCCCCccccccce
Confidence 3 556777776543 36777766 4678776554
No 71
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.85 E-value=0.16 Score=47.49 Aligned_cols=270 Identities=12% Similarity=-0.042 Sum_probs=124.5
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCcc-ccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCc
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPR-YKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADK 78 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~ 78 (507)
+..++.+|+.+.+-..... .+... .-+.++.. ++.+|+.+.. ...+++||+.++.-...-..+..
T Consensus 10 ~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---- 77 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVIT---IADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTP---- 77 (337)
T ss_dssp TTEEEEEETTTTEEEEEEE---CTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBT----
T ss_pred CCeEEEEECCCCcEEEEEE---cCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCc----
Confidence 4457789988776543321 12110 12233333 3467777652 24699999988765432211100
Q ss_pred cccCCccCCCCCccceeeEEE--CCEEEEEcccC---CCCC--CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-
Q 010571 79 TEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHY---KKSS--DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV- 150 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~---~~~~--~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~- 150 (507)
. .....-+.++.. ++.||+..... .... ....+.+||+.+++.......+.. -..++..
T Consensus 78 -------~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~s~ 144 (337)
T 1pby_B 78 -------E-ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ-----ITMLAWAR 144 (337)
T ss_dssp -------T-EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS-----CCCEEECT
T ss_pred -------c-cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC-----cceeEECC
Confidence 0 000011122222 34677764210 0100 135699999998876543321111 1222222
Q ss_pred CC-EEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCC------------C--
Q 010571 151 GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSH------------S-- 215 (507)
Q Consensus 151 ~~-~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~------------~-- 215 (507)
++ .||+.+ +.++.+|+.+++-...-..+..+.+. .. .-.+..+|+.+.... +
T Consensus 145 dg~~l~~~~---------~~i~~~d~~~~~~~~~~~~~~~~~~~---~~-s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 211 (337)
T 1pby_B 145 DGSKLYGLG---------RDLHVMDPEAGTLVEDKPIQSWEAET---YA-QPDVLAVWNQHESSGVMATPFYTARKDIDP 211 (337)
T ss_dssp TSSCEEEES---------SSEEEEETTTTEEEEEECSTTTTTTT---BC-CCBCCCCCCCCTTTTEEEEEEEEEBTTSCT
T ss_pred CCCEEEEeC---------CeEEEEECCCCcEeeeeeccccCCCc---ee-CCCccEEeeeccCCCceeeeeecccccccc
Confidence 33 466652 36999999888755433222211111 11 111122222211110 0
Q ss_pred ----cCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCC
Q 010571 216 ----IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKG 289 (507)
Q Consensus 216 ----~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~ 289 (507)
.....++++|+.+..-..+... +.. .....+.+ +++.++++ .+.+++||+.+..-......+.
T Consensus 212 ~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~-~~~~~~~~s~dg~~l~~~-------~~~v~~~d~~~~~~~~~~~~~~ 280 (337)
T 1pby_B 212 ADPTAYRTGLLTMDLETGEMAMREVR---IMD-VFYFSTAVNPAKTRAFGA-------YNVLESFDLEKNASIKRVPLPH 280 (337)
T ss_dssp TSGGGEEEEEEEEETTTCCEEEEEEE---ECS-SCEEEEEECTTSSEEEEE-------ESEEEEEETTTTEEEEEEECSS
T ss_pred ccccccccceEEEeCCCCCceEeecC---CCC-CceeeEEECCCCCEEEEe-------CCeEEEEECCCCcCcceecCCC
Confidence 0011588999988776533221 111 11222333 33333333 1478999998775433222211
Q ss_pred CCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 290 RNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 290 ~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
........+++..|++. +. .+.+.++|+.+.
T Consensus 281 --------~~~~~~~s~dg~~l~~~-~~----~~~i~v~d~~~~ 311 (337)
T 1pby_B 281 --------SYYSVNVSTDGSTVWLG-GA----LGDLAAYDAETL 311 (337)
T ss_dssp --------CCCEEEECTTSCEEEEE-SB----SSEEEEEETTTC
T ss_pred --------ceeeEEECCCCCEEEEE-cC----CCcEEEEECcCC
Confidence 11223334445567664 32 367899998654
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.84 E-value=0.28 Score=45.97 Aligned_cols=235 Identities=11% Similarity=0.035 Sum_probs=116.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEE-EC-CEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WG-TKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~~ 114 (507)
.+.+|+.+.. ...+.+||+.+++....-..+ .....++. -+ +.||+.+..
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~s~dg~~l~~~~~~----- 60 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLG------------------YDFVDTAITSDCSNVVVTSDF----- 60 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECC------------------CCEEEEEECSSSCEEEEEEST-----
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEcc------------------CCcceEEEcCCCCEEEEEeCC-----
Confidence 4667777652 357999999998875544322 11112222 23 457776652
Q ss_pred CcceEEEEECCCCcE-EEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 115 DSMIVRFIDLETNLC-GVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
...+++||+.++.. ......+.. +. ++++.. +..+| .+..... ...+.+||+.+++.......+.
T Consensus 61 -~~~i~~~d~~~~~~~~~~~~~~~~--~~--~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~--- 128 (331)
T 3u4y_A 61 -CQTLVQIETQLEPPKVVAIQEGQS--SM--ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPY--- 128 (331)
T ss_dssp -TCEEEEEECSSSSCEEEEEEECSS--CC--CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCT---
T ss_pred -CCeEEEEECCCCceeEEecccCCC--Cc--cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCC---
Confidence 23699999998875 222211111 11 112222 33566 3322111 2279999999887655433222
Q ss_pred CCCCceEEEEcCc-EEEEEeCCCCCcCCCc-EEEEECCCCc-EEeeeecCCCCCCCcceEEEEE--CCE-EEEEeccCCC
Q 010571 192 PRYDHSAALHANR-YLIVFGGCSHSIFFND-LHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI--DEN-WYIVGGGDNN 265 (507)
Q Consensus 192 ~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~-i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~ 265 (507)
..+.++...++ .+|+.+... +. +.+|++.... ...... ...+.... ...+.+ +++ +|+.+..
T Consensus 129 --~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~-~~~~~~~~-~~~~~~spdg~~l~v~~~~--- 196 (331)
T 3u4y_A 129 --DAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTGQ-EFISGGTR-PFNITFTPDGNFAFVANLI--- 196 (331)
T ss_dssp --TEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEEE-EEECSSSS-EEEEEECTTSSEEEEEETT---
T ss_pred --CccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecCC-ccccCCCC-ccceEECCCCCEEEEEeCC---
Confidence 12455555554 466665432 45 7777765432 111100 00111111 223333 344 6666532
Q ss_pred CCcceEEEEEcCcCee-EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCCC
Q 010571 266 NGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 266 ~~~~d~~~~d~~~~~W-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~w 335 (507)
.+.+.+||+.+... ..+..++.. .........+++.+||+.... .+.++++|+.+...
T Consensus 197 --~~~v~v~d~~~~~~~~~~~~~~~~------~~~~~~~~spdg~~l~v~~~~----~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 197 --GNSIGILETQNPENITLLNAVGTN------NLPGTIVVSRDGSTVYVLTES----TVDVFNFNQLSGTL 255 (331)
T ss_dssp --TTEEEEEECSSTTSCEEEEEEECS------SCCCCEEECTTSSEEEEECSS----EEEEEEEETTTTEE
T ss_pred --CCeEEEEECCCCcccceeeeccCC------CCCceEEECCCCCEEEEEEcC----CCEEEEEECCCCce
Confidence 23688999887764 112122111 111223344455667776542 34588889876544
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.83 E-value=0.45 Score=47.07 Aligned_cols=145 Identities=12% Similarity=0.156 Sum_probs=77.0
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 151 ~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
++.+++.|+.+ ..+.+||+.+.+-...-. + ....-.+++...++..++.|+.+ ..+.+||+.++.
T Consensus 279 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~ 343 (464)
T 3v7d_B 279 HGNIVVSGSYD------NTLIVWDVAQMKCLYILS-G---HTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGE 343 (464)
T ss_dssp ETTEEEEEETT------SCEEEEETTTTEEEEEEC-C---CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEec-C---CCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc
Confidence 44556666643 359999998766443321 1 11122234444555567777754 458999998765
Q ss_pred EEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceE
Q 010571 231 WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHH 310 (507)
Q Consensus 231 W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 310 (507)
-... .........++.+++..++.|+.++ .+.+||+.+..-....... .........+++ .
T Consensus 344 ~~~~-----~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~--------~~~~~~~~~~~~-~ 404 (464)
T 3v7d_B 344 LMYT-----LQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYHHT--------NLSAITTFYVSD-N 404 (464)
T ss_dssp EEEE-----ECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEECT--------TCCCEEEEEECS-S
T ss_pred EEEE-----EeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeecCC--------CCccEEEEEeCC-C
Confidence 4332 1112222344556677777777543 4788888775422211110 111122222333 4
Q ss_pred EEEEcccCCCcCCeEEEEECCCCC
Q 010571 311 LVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 311 l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
+++.|+ + ..+.++|+.+..
T Consensus 405 ~l~~~~-d----g~i~iwd~~~g~ 423 (464)
T 3v7d_B 405 ILVSGS-E----NQFNIYNLRSGK 423 (464)
T ss_dssp EEEEEE-T----TEEEEEETTTCC
T ss_pred EEEEec-C----CeEEEEECCCCc
Confidence 666666 2 468889987653
No 74
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.73 E-value=0.36 Score=46.31 Aligned_cols=211 Identities=10% Similarity=-0.011 Sum_probs=93.8
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~ 194 (507)
...++.+|+.++.-..+... + ....+....- ++..+++............++.+|+.+.....+.. ......
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~---~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~ 239 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQE---N-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---HAEGES 239 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEE---S-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---CCTTEE
T ss_pred cceEEEEECCCCceEEeecC---C-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---CCCCcc
Confidence 46799999999876666421 1 1122222222 34433333222211224579999998777665542 111111
Q ss_pred CceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCC--CCcceEEEEECCEEEEEeccC----CCCCc
Q 010571 195 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT--GRAGHAGITIDENWYIVGGGD----NNNGC 268 (507)
Q Consensus 195 ~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~--~r~~~~~~~~~~~l~v~GG~~----~~~~~ 268 (507)
........++..+++...........++++|+.++.-+.+........ .........-+++.+++.-.. .....
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 112223344433333222211111249999999988666532111000 000000122233222221100 11223
Q ss_pred ceEEEEEcCcCeeEEeccCCCCCCC---CCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCCC
Q 010571 269 QETIVLNMTKLAWSILTSVKGRNPL---ASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 269 ~d~~~~d~~~~~W~~~~~~~~~~p~---~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~w 335 (507)
..++++|+.+..-..+......... .+..........+++..|+......+ ...+|.+++....|
T Consensus 320 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g--~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 320 PFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHG--KPALYLATLPESVW 387 (388)
T ss_dssp CEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS--SCEEEEEECCGGGG
T ss_pred CEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCC--ceeEEEEECChhcc
Confidence 5799999998887766543320000 00000111223344445555443332 45699999865443
No 75
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.72 E-value=0.35 Score=44.33 Aligned_cols=252 Identities=8% Similarity=-0.030 Sum_probs=126.7
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
.+..||+. .....++.... ...-+++++. ++.+|+.... ...+.+||+. +.+........
T Consensus 42 ~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~--------- 102 (300)
T 2qc5_A 42 KISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQP--------- 102 (300)
T ss_dssp EEEEECTT-SCEEEEECSST---TCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSST---------
T ss_pred eEEEECCC-CceEEEECCCC---CCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCCC---------
Confidence 45677777 66666542111 1122333333 4667776431 2458899988 77654432110
Q ss_pred CccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcC
Q 010571 83 GLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGG 159 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG 159 (507)
...-++++.. ++.||+.... ...+..||+. ++...... +..........+ ++.+|+...
T Consensus 103 -------~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 103 -------DSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYDL----PNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp -------TCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEEC----SSTTCCEEEEEECTTSSEEEEET
T ss_pred -------CCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEccC----CCCCCCceeEEECCCCCEEEEec
Confidence 1122333333 5788886532 2358899988 66665432 211112222333 356777542
Q ss_pred cCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCC
Q 010571 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 160 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
. .+.+++||+ +++.......+.. ..-..++...++.+|+.... .+.+.+||+ ++.+.....
T Consensus 165 ~------~~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~--- 225 (300)
T 2qc5_A 165 Q------NNSIGRITN-TGKLEEYPLPTNA---AAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYDI--- 225 (300)
T ss_dssp T------TTEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC---
T ss_pred C------CCeEEEECC-CCcEEEeeCCCCC---CCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEEC---
Confidence 1 246999998 6777665421111 11123334345668775432 146889998 566655421
Q ss_pred CCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccc
Q 010571 240 LVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGY 317 (507)
Q Consensus 240 ~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~ 317 (507)
+........+.+ ++++|+.... .+.+.+||+ +.....+..... ......+.++.++.|++.+.
T Consensus 226 -~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~-------~~~~~~i~~~~~g~l~v~~~- 290 (300)
T 2qc5_A 226 -PTPNARPHAITAGKNSEIWFTEWG-----ANQIGRITN-DNTIQEYQLQTE-------NAEPHGITFGKDGSVWFALK- 290 (300)
T ss_dssp -SSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECT-TSCEEEEECCST-------TCCCCCEEECTTSCEEEECS-
T ss_pred -CCCCCCceEEEECCCCCEEEeccC-----CCeEEEECC-CCcEEEEECCcc-------CCccceeEeCCCCCEEEEcc-
Confidence 111222233344 4578776522 235888988 455554322111 01112233444445666432
Q ss_pred CCCcCCeEEEEECC
Q 010571 318 NGKYNNEVFVMRLK 331 (507)
Q Consensus 318 ~~~~~~~v~~~~~~ 331 (507)
. .++.|++.
T Consensus 291 ----~-~i~~~~p~ 299 (300)
T 2qc5_A 291 ----C-KIGKLNLN 299 (300)
T ss_dssp ----S-EEEEEEEC
T ss_pred ----C-ceEEeCCC
Confidence 2 67777764
No 76
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.72 E-value=0.53 Score=46.36 Aligned_cols=225 Identities=15% Similarity=0.151 Sum_probs=116.4
Q ss_pred CEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcc
Q 010571 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSM 117 (507)
Q Consensus 38 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 117 (507)
+.+++.|+.+ ..+.+||+.++.-...-.. ......++..++..++.|+.+ .
T Consensus 169 ~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~------------------h~~~v~~~~~~~~~l~s~s~d------g 219 (445)
T 2ovr_B 169 DNIIISGSTD-----RTLKVWNAETGECIHTLYG------------------HTSTVRCMHLHEKRVVSGSRD------A 219 (445)
T ss_dssp TTEEEEEETT-----SCEEEEETTTTEEEEEECC------------------CSSCEEEEEEETTEEEEEETT------S
T ss_pred CCEEEEEeCC-----CeEEEEECCcCcEEEEECC------------------CCCcEEEEEecCCEEEEEeCC------C
Confidence 4466666633 4588999988754322111 111223333445556666543 3
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCce
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHS 197 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~ 197 (507)
.+.+||+.+++-..... .......++.+++..++.|+.+ ..+.+||+.+.+-...-. + ......
T Consensus 220 ~i~~wd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~-~----~~~~v~ 283 (445)
T 2ovr_B 220 TLRVWDIETGQCLHVLM-----GHVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETETCLHTLQ-G----HTNRVY 283 (445)
T ss_dssp EEEEEESSSCCEEEEEE-----CCSSCEEEEEECSSCEEEEETT------SCEEEEEGGGTEEEEEEC-C----CSSCEE
T ss_pred EEEEEECCCCcEEEEEc-----CCcccEEEEEECCCEEEEEcCC------CEEEEEECCCCcEeEEec-C----CCCceE
Confidence 58899988875433221 1112223344577777777653 358899987765433221 1 111223
Q ss_pred EEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcC
Q 010571 198 AALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 198 ~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~ 277 (507)
.+.+.+. .++.|+.+ ..+.+||+.+..-...- ........+...++..++.|+.++ .+.+||+.
T Consensus 284 ~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~~ 347 (445)
T 2ovr_B 284 SLQFDGI-HVVSGSLD-----TSIRVWDVETGNCIHTL-----TGHQSLTSGMELKDNILVSGNADS-----TVKIWDIK 347 (445)
T ss_dssp EEEECSS-EEEEEETT-----SCEEEEETTTCCEEEEE-----CCCCSCEEEEEEETTEEEEEETTS-----CEEEEETT
T ss_pred EEEECCC-EEEEEeCC-----CeEEEEECCCCCEEEEE-----cCCcccEEEEEEeCCEEEEEeCCC-----eEEEEECC
Confidence 3344444 66666654 45889999877643321 111122233445566777777543 47889987
Q ss_pred cCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 278 KLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 278 ~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
+..-.. .+... ..+......+..++ .+++.|+.+ ..+.++|+.+..
T Consensus 348 ~~~~~~--~~~~~---~~~~~~v~~~~~~~--~~l~s~~~d----g~v~iwd~~~~~ 393 (445)
T 2ovr_B 348 TGQCLQ--TLQGP---NKHQSAVTCLQFNK--NFVITSSDD----GTVKLWDLKTGE 393 (445)
T ss_dssp TCCEEE--EECST---TSCSSCEEEEEECS--SEEEEEETT----SEEEEEETTTCC
T ss_pred CCcEEE--EEccC---CCCCCCEEEEEECC--CEEEEEeCC----CeEEEEECCCCc
Confidence 664322 11110 01122233333443 356667654 468888876543
No 77
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.68 E-value=0.3 Score=45.88 Aligned_cols=160 Identities=15% Similarity=0.076 Sum_probs=78.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-C-CEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-G-TKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~ 114 (507)
++.+|+.++. ...++++|+.+++....-..+. ...-+.++.. + +.+|+.+..
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~----------------~~~~~~~~~s~dg~~~~v~~~~----- 63 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPD----------------KFGPGTAMMAPDNRTAYVLNNH----- 63 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEECSS----------------CCSSCEEEECTTSSEEEEEETT-----
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCC----------------CCCCceeEECCCCCEEEEEeCC-----
Confidence 5778887763 3569999999887544322211 0011222222 3 457777532
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCC--CcccceEEEE-CC-EEEEEcCc--CCCCC---ccCcEEEEEcCCCcEEEeec
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPV--ARGGHSVTLV-GS-RLIIFGGE--DRSRK---LLNDVHFLDLETMTWDAVEV 185 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~--~r~~~~~~~~-~~-~l~~~GG~--~~~~~---~~~~~~~~d~~t~~W~~~~~ 185 (507)
...+++||+.+++-......+..|. ...-..++.. ++ .+|+.+.. ..... ..+.+.+||+.+++-.....
T Consensus 64 -~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 142 (349)
T 1jmx_B 64 -YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 142 (349)
T ss_dssp -TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred -CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee
Confidence 2459999999887554332111111 1111222222 33 55554421 00000 12579999987743211110
Q ss_pred CCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 186 TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 186 ~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
.... ++...+++...++.+|+.+ ++++++|+.++....
T Consensus 143 ~~~~--~~~~~~~~~s~dg~l~~~~--------~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 143 TFPM--PRQVYLMRAADDGSLYVAG--------PDIYKMDVKTGKYTV 180 (349)
T ss_dssp EEEC--CSSCCCEEECTTSCEEEES--------SSEEEECTTTCCEEE
T ss_pred eccC--CCcccceeECCCCcEEEcc--------CcEEEEeCCCCceec
Confidence 0011 2223344455566666632 248899988776543
No 78
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.67 E-value=0.39 Score=45.42 Aligned_cols=228 Identities=14% Similarity=0.115 Sum_probs=112.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|..++.-...-... .....++.+ ++.+++.||.+
T Consensus 66 d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~s~~~d---- 118 (340)
T 1got_B 66 DSRLLLSASQD-----GKLIIWDSYTTNKVHAIPLR------------------SSWVMTCAYAPSGNYVACGGLD---- 118 (340)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEECS------------------SSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCcceEeecC------------------CccEEEEEECCCCCEEEEEeCC----
Confidence 45566666643 45888998876533222111 111222222 56666777653
Q ss_pred CcceEEEEECCCCc--EEEeecCCCCCCCccc-ceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCC
Q 010571 115 DSMIVRFIDLETNL--CGVMETSGKVPVARGG-HSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP 190 (507)
Q Consensus 115 ~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~-~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p 190 (507)
..+.+||+.+.. ..... .+...... .++... ++. ++.|+.+ ..+.++|+.+.+-...-. +
T Consensus 119 --~~v~iw~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~-l~s~s~d------~~i~~wd~~~~~~~~~~~-~--- 182 (340)
T 1got_B 119 --NICSIYNLKTREGNVRVSR---ELAGHTGYLSCCRFLDDNQ-IVTSSGD------TTCALWDIETGQQTTTFT-G--- 182 (340)
T ss_dssp --CEEEEEETTTCSBSCEEEE---EEECCSSCEEEEEEEETTE-EEEEETT------SCEEEEETTTTEEEEEEC-C---
T ss_pred --CeEEEEECccCCCcceeEE---EecCCCccEEEEEECCCCc-EEEEECC------CcEEEEECCCCcEEEEEc-C---
Confidence 347788877642 11111 00001111 112222 445 4445432 358899998876543321 1
Q ss_pred CCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCc
Q 010571 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGC 268 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~ 268 (507)
....-.+++...++.+++.|+.+ ..+.+||+.+..-...- ......-.++.+ ++.+++.|+.++
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~d~---- 248 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDVREGMCRQTF-----TGHESDINAICFFPNGNAFATGSDDA---- 248 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTS----
T ss_pred CCCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeeEEEE-----cCCcCCEEEEEEcCCCCEEEEEcCCC----
Confidence 11112233444566677777765 45888998876543321 111111222333 567777777544
Q ss_pred ceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 269 QETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 269 ~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
.+.+||+.+..-... .... ........+.+..+..+++.|+.+ ..+.++|...
T Consensus 249 -~v~iwd~~~~~~~~~--~~~~----~~~~~v~~~~~s~~g~~l~~g~~d----~~i~vwd~~~ 301 (340)
T 1got_B 249 -TCRLFDLRADQELMT--YSHD----NIICGITSVSFSKSGRLLLAGYDD----FNCNVWDALK 301 (340)
T ss_dssp -CEEEEETTTTEEEEE--ECCT----TCCSCEEEEEECTTSSEEEEEETT----SEEEEEETTT
T ss_pred -cEEEEECCCCcEEEE--EccC----CcccceEEEEECCCCCEEEEECCC----CeEEEEEccc
Confidence 377888876643221 1110 011123344444444566777754 4577778644
No 79
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.67 E-value=0.14 Score=54.33 Aligned_cols=146 Identities=12% Similarity=0.020 Sum_probs=70.6
Q ss_pred cEEEEEcCC-CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCC-CCCcc
Q 010571 169 DVHFLDLET-MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV-TGRAG 246 (507)
Q Consensus 169 ~~~~~d~~t-~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p-~~r~~ 246 (507)
.++.+|+.+ .+-..+... .........++. .++..++++..+.......++++|+.++....+....... .....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEECSSTTCCCEEECCC--SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred EEEEEECCCCCceEEecCC--CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 688889888 775555321 011111223333 4544444444322233467999999998876653211100 00111
Q ss_pred eEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCce-EE-EEEcCceEEEEEcccCCCcCCe
Q 010571 247 HAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSV-CS-AIIEGEHHLVAFGGYNGKYNNE 324 (507)
Q Consensus 247 ~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~-~~-~~~~~~~~l~v~GG~~~~~~~~ 324 (507)
..+..-++++++.++.+ ....+|.+|.... ...+..- .... .. ...+++..|++.+..++.....
T Consensus 341 ~~~~spdg~~~~~~~~~---g~~~l~~~~~~~~-~~~l~~~---------~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERT---GFQHLYRIDSKGK-AAALTHG---------NWSVDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp CCEECTTSCEEEEECTT---SSCEEEEECSSSC-EEESCCS---------SSCEEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred ceEECCCCeEEEEecCC---CccEEEEEcCCCC-eeeeeec---------ceEEEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 12222356666665433 2357888887666 5544321 1111 11 1334445566555544333445
Q ss_pred EEEEEC
Q 010571 325 VFVMRL 330 (507)
Q Consensus 325 v~~~~~ 330 (507)
+|..++
T Consensus 408 l~~~~~ 413 (741)
T 2ecf_A 408 IYAVPL 413 (741)
T ss_dssp EEEEET
T ss_pred EEEEEc
Confidence 666665
No 80
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.64 E-value=0.49 Score=45.00 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=52.3
Q ss_pred EEEEcCCCCCccCCc--eEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEEC-CEEEEEcccCCCCCCc
Q 010571 40 LYIVGGSRNGRFLSD--VQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWG-TKLLILGGHYKKSSDS 116 (507)
Q Consensus 40 lyv~GG~~~~~~~~~--~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~ 116 (507)
.+++|.+.... ... ++.+|+.++.+..+... .. ..-.+.+..-+ ..||+.+.... ....
T Consensus 15 ~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~-~~---------------~~p~~l~~spdg~~l~~~~~~~~-~~~~ 76 (361)
T 3scy_A 15 TMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDA-EV---------------ANPSYLIPSADGKFVYSVNEFSK-DQAA 76 (361)
T ss_dssp EEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEE-EC---------------SCCCSEEECTTSSEEEEEECCSS-TTCE
T ss_pred EEEEEeccCCC-CCCEEEEEEeCCCCCEEEeecc-cC---------------CCCceEEECCCCCEEEEEEccCC-CCCc
Confidence 44456544321 223 55667788888776643 11 11112222223 45666554321 1113
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEECC-EEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGS-RLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
-.+|.++..++..+.+.. .+..........+++ .||+.+.. .+.+.+|++.+
T Consensus 77 v~~~~~~~~~g~~~~~~~---~~~~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~ 129 (361)
T 3scy_A 77 VSAFAFDKEKGTLHLLNT---QKTMGADPCYLTTNGKNIVTANYS------GGSITVFPIGQ 129 (361)
T ss_dssp EEEEEEETTTTEEEEEEE---EECSSSCEEEEEECSSEEEEEETT------TTEEEEEEBCT
T ss_pred EEEEEEeCCCCcEEEeeE---eccCCCCcEEEEECCCEEEEEECC------CCEEEEEEeCC
Confidence 345666777777776652 221111222222255 56655422 23588888764
No 81
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.60 E-value=0.42 Score=43.76 Aligned_cols=213 Identities=9% Similarity=-0.037 Sum_probs=108.3
Q ss_pred CeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCC
Q 010571 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSG 83 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~ 83 (507)
.+.||+. .....+..+. ....-++++.. ++.||+.... ...+++||+ ++.........
T Consensus 80 i~~~~~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~----------- 138 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPN---PDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN----------- 138 (299)
T ss_dssp EEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS-----------
T ss_pred EEEECCC-CcEEEEeCCC---cCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC-----------
Confidence 5677765 4555544211 11223344444 4678776432 246889998 66655443211
Q ss_pred ccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCc
Q 010571 84 LLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGE 160 (507)
Q Consensus 84 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~ 160 (507)
....-++++.. +++||+.... ...+++||+ +++...... +..........+ ++.+|+....
T Consensus 139 -----~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 139 -----KGSYPSFITLGSDNALWFTENQ------NNAIGRITE-SGDITEFKI----PTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp -----TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEETT
T ss_pred -----CCCCCceEEEcCCCCEEEEeCC------CCEEEEEcC-CCcEEEeeC----CCCCCcceeEEECCCCCEEEEccC
Confidence 01122333333 5678876421 235999999 777776532 111112222333 3577775432
Q ss_pred CCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCC
Q 010571 161 DRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 240 (507)
Q Consensus 161 ~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 240 (507)
.+.+.+||+ ++.......... ...-.+++...++.+|+.... .+.+.+||+ ++..........
T Consensus 203 ------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~- 265 (299)
T 2z2n_A 203 ------GNKIGRITT-SGEITEFKIPTP---NARPHAITAGAGIDLWFTEWG-----ANKIGRLTS-NNIIEEYPIQIK- 265 (299)
T ss_dssp ------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT-----TTEEEEEET-TTEEEEEECSSS-
T ss_pred ------CceEEEECC-CCcEEEEECCCC---CCCceeEEECCCCCEEEeccC-----CceEEEECC-CCceEEEeCCCC-
Confidence 346999999 777766532111 111223444445668776422 256899998 455544321111
Q ss_pred CCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 241 VTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 241 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
...-++++.-++.+|+... .+.+.+|++.+.
T Consensus 266 --~~~~~~i~~~~g~l~v~~~------~~~l~~~~~~~~ 296 (299)
T 2z2n_A 266 --SAEPHGICFDGETIWFAME------CDKIGKLTLIKD 296 (299)
T ss_dssp --SCCEEEEEECSSCEEEEET------TTEEEEEEEC--
T ss_pred --CCccceEEecCCCEEEEec------CCcEEEEEcCcc
Confidence 1122233344556776542 135778887665
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.57 E-value=0.085 Score=56.46 Aligned_cols=192 Identities=11% Similarity=0.088 Sum_probs=98.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--C--CEEEEEcccCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~ 112 (507)
++.+++.||.+ ..+.+||..++++..+..... ......++.+ + +.+++.|+.+.
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~----------------h~~~V~~l~~s~~~~~~~l~s~s~Dg- 77 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTG----------------HEGPVWRVDWAHPKFGTILASCSYDG- 77 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECC----------------CSSCEEEEEECCTTSCSEEEEEETTS-
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccC----------------CcCceEEEEecCCCCCCEEEEEeCCC-
Confidence 35566666633 458888888777766655431 1222233333 2 56777776532
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--C--CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCC
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT 188 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~ 188 (507)
.+.+||+.++.|..... .........++.+ + +.+++.|+.+ ..+.+||+.+..-........
T Consensus 78 -----~I~vwd~~~~~~~~~~~---~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 78 -----KVLIWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp -----CEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEEC
T ss_pred -----eEEEEECCCCccccccc---ccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeec
Confidence 38889998988776653 2222222233333 2 5677777753 358888887652111110001
Q ss_pred CCCCCCCceEEEEc-------------CcEEEEEeCCCCCcCCCcEEEEECCCC--cEEeeeecCCCCCCCcceEEEEE-
Q 010571 189 PPAPRYDHSAALHA-------------NRYLIVFGGCSHSIFFNDLHVLDLQTN--EWSQPEIKGDLVTGRAGHAGITI- 252 (507)
Q Consensus 189 ~p~~r~~~~~~~~~-------------~~~l~i~GG~~~~~~~~~i~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~- 252 (507)
.+ ..-.++.... ++.+++.|+.+ ..+.+||+.+. .+..+.. .......-.++.+
T Consensus 144 ~~--~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~---~~~h~~~V~~l~~s 213 (753)
T 3jro_A 144 HA--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLEST---LEGHSDWVRDVAWS 213 (753)
T ss_dssp CS--SCEEEEEECCCC---------CGGGCCEEEEETT-----SCEEEEEEETTTTEEEEEEE---ECCCSSCEEEEEEC
T ss_pred CC--CceEEEEecCcccccccccccCCCCCEEEEEECC-----CeEEEEeccCCcccceeeee---ecCCCCcEEEEEec
Confidence 11 1111222222 34567777764 34777877554 3433321 1111122233333
Q ss_pred -C---CEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 253 -D---ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 253 -~---~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
+ +.+++.||.++ .+.+||+.+.
T Consensus 214 p~~~~~~~l~s~s~Dg-----~I~iwd~~~~ 239 (753)
T 3jro_A 214 PTVLLRSYLASVSQDR-----TCIIWTQDNE 239 (753)
T ss_dssp CCCSSSEEEEEEESSS-----CEEEEEESSS
T ss_pred cCCCCCCEEEEEecCC-----EEEEecCCCC
Confidence 3 57888887554 3677887664
No 83
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.51 E-value=0.51 Score=43.67 Aligned_cols=246 Identities=11% Similarity=0.076 Sum_probs=118.1
Q ss_pred CCEEEEEcCCC--CCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-C-CEEEEEcccCCC
Q 010571 37 DQKLYIVGGSR--NGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-G-TKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~lyv~GG~~--~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~ 112 (507)
++.+|+..... .+.....+++||+.++.+..+..... ... ...-++++.. + ++||+....
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~------------~~~-~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV------------NGY-GGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE------------TTE-ECCEEEEEECSSSSEEEEEETT---
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEeccc------------CCC-CCCCceEEEecCCCcEEEEECC---
Confidence 56788871100 01123469999999988876543100 000 0111233332 4 788887641
Q ss_pred CCCcceEEEEECCCCcEEEe-ecCCCCCCCcccceEEEE--CCEEEEEcCcC---------CCCCccCcEEEEEcCCCcE
Q 010571 113 SSDSMIVRFIDLETNLCGVM-ETSGKVPVARGGHSVTLV--GSRLIIFGGED---------RSRKLLNDVHFLDLETMTW 180 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~-~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~---------~~~~~~~~~~~~d~~t~~W 180 (507)
+.+++||+. ++...+ ... ....+......+.+ ++.+|+....+ ........++.||+. ++.
T Consensus 92 ----~~l~~~d~~-g~~~~~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 92 ----LGLLVVQTD-GTFEEIAKKD-SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp ----TEEEEEETT-SCEEECCSBC-TTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred ----CCEEEEeCC-CCEEEEEecc-CCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence 258999998 777655 321 11111111222333 45787765432 111123569999987 666
Q ss_pred EEeecCCCCCCCCCCceEEEE----cCc-EEEEEeCCCCCcCCCcEEEEECC-CCcEEeeeecCCCCCCC-cceEEEEE-
Q 010571 181 DAVEVTQTPPAPRYDHSAALH----ANR-YLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGR-AGHAGITI- 252 (507)
Q Consensus 181 ~~~~~~g~~p~~r~~~~~~~~----~~~-~l~i~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r-~~~~~~~~- 252 (507)
..+...... ...++.. .++ .+|+..... +.+++||+. ++.+.........+... .....+.+
T Consensus 165 ~~~~~~~~~-----~~~i~~~~~~d~dg~~l~v~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 165 IQVDTAFQF-----PNGIAVRHMNDGRPYQLIVAETPT-----KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp EEEEEEESS-----EEEEEEEECTTSCEEEEEEEETTT-----TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred EEeccCCCC-----cceEEEecccCCCCCEEEEEECCC-----CeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 554321111 1234444 455 466654322 568899875 44443221111122111 11222333
Q ss_pred -CCEEEEEeccCCCCCcceEEEEEcCcCee-EEeccCCCCCCCCCCCCceEEEEE-cCceEEEEEcccCCCcCCeEEEEE
Q 010571 253 -DENWYIVGGGDNNNGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGKYNNEVFVMR 329 (507)
Q Consensus 253 -~~~l~v~GG~~~~~~~~d~~~~d~~~~~W-~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~v~~~~ 329 (507)
++++|+....+ +.+.+||+.+... ..+. .+. .....+.+ +++..||+.+.. ...++.|+
T Consensus 235 ~~G~l~v~~~~~-----~~i~~~d~~~g~~~~~~~-~~~--------~~~~~i~~~~dg~~l~v~~~~----~~~l~~~~ 296 (314)
T 1pjx_A 235 EDNNLLVANWGS-----SHIEVFGPDGGQPKMRIR-CPF--------EKPSNLHFKPQTKTIFVTEHE----NNAVWKFE 296 (314)
T ss_dssp TTCCEEEEEETT-----TEEEEECTTCBSCSEEEE-CSS--------SCEEEEEECTTSSEEEEEETT----TTEEEEEE
T ss_pred CCCCEEEEEcCC-----CEEEEEcCCCCcEeEEEe-CCC--------CCceeEEECCCCCEEEEEeCC----CCeEEEEe
Confidence 46787764321 2588899874432 2221 111 11222333 334457775542 25789999
Q ss_pred CCCC
Q 010571 330 LKPR 333 (507)
Q Consensus 330 ~~~~ 333 (507)
+...
T Consensus 297 ~~~~ 300 (314)
T 1pjx_A 297 WQRN 300 (314)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8643
No 84
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.48 E-value=0.57 Score=48.16 Aligned_cols=131 Identities=13% Similarity=0.113 Sum_probs=73.2
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEC-CCCc--eeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEc
Q 010571 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDL-RSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILG 107 (507)
Q Consensus 31 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~-~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~G 107 (507)
.+.++.++.||+.... ...++.||. .+++ |+.-...... .. ..........+.+..+++||+..
T Consensus 56 ~~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~v~v~~ 122 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDAS----TK----AVMCCDVVDRGLAYGAGQIVKKQ 122 (571)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGG----GG----GGCTTCSCCCCCEEETTEEEEEC
T ss_pred cccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCcc----cc----ccccccccccccEEECCEEEEEe
Confidence 4456679999998652 246999999 8874 8764332110 00 00000011224556789998874
Q ss_pred ccCCCCCCcceEEEEECCCC--cEEEeecCCCCCCC-cccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCc--EEE
Q 010571 108 GHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVA-RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDA 182 (507)
Q Consensus 108 G~~~~~~~~~~~~~~d~~t~--~W~~~~~~g~~p~~-r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~--W~~ 182 (507)
. ...++.+|..|+ .|+.... ..+.. ....+.++.++.+|+-.+.... .....++.||+.|++ |+.
T Consensus 123 ~-------dg~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 123 A-------NGHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEE
T ss_pred C-------CCEEEEEECCCCCEEEEecCC--CCCccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEE
Confidence 3 235999999887 4875431 11111 1122334568888765432111 113469999998765 876
Q ss_pred ee
Q 010571 183 VE 184 (507)
Q Consensus 183 ~~ 184 (507)
-.
T Consensus 193 ~~ 194 (571)
T 2ad6_A 193 FA 194 (571)
T ss_dssp ES
T ss_pred cc
Confidence 53
No 85
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.46 E-value=0.18 Score=49.47 Aligned_cols=261 Identities=15% Similarity=0.114 Sum_probs=120.6
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCcc-ccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcc
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPR-YKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r-~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~ 79 (507)
|+-++++|..++.-..+-. ..... .=.+++.. ++.+++.|+.+ ..+.++|+.++.-......
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~~~~-------- 187 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTS-------- 187 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECC--------
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEeC--------
Confidence 4556788888877665531 21111 11222222 55667777643 4588999988764332211
Q ss_pred ccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEE
Q 010571 80 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~ 157 (507)
......+...++.+++.|+.. ..+..+|..+.........+. ......... .+..++.
T Consensus 188 ----------h~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h----~~~~~~~~~~~~g~~l~s 247 (420)
T 4gga_A 188 ----------HSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGH----SQEVCGLRWAPDGRHLAS 247 (420)
T ss_dssp ----------CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECC----SSCEEEEEECTTSSEEEE
T ss_pred ----------CCCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccc----ccceeeeeecCCCCeeee
Confidence 122234455567777777653 247777776654332221111 111111222 3455555
Q ss_pred cCcCCCCCccCcEEEEEcCCCcE--EEeecCCCCCCCCCCceEEEE--cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTW--DAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W--~~~~~~g~~p~~r~~~~~~~~--~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
|+.+ +.+.++|..+..- ..+...... ...-.+++.. ....+++.||..+ ..|.+||+.++.-..
T Consensus 248 ~~~D------~~v~i~~~~~~~~~~~~~~~~~~~--~~~V~~~~~~p~~~~~la~~~gs~D----~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 248 GGND------NLVNVWPSAPGEGGWVPLQTFTQH--QGAVKAVAWCPWQSNVLATGGGTSD----RHIRIWNVCSGACLS 315 (420)
T ss_dssp EETT------SCEEEEESSCCSSCSCCSEEECCC--SSCEEEEEECTTCTTEEEEEECTTT----CEEEEEETTTTEEEE
T ss_pred eecc------ccceEEeeccccccceeeeeeccc--CCceeeeeeCCCcccEEEEEeecCC----CEEEEEeCCccccce
Confidence 5543 3477777765431 111100000 0011111222 2343444455432 358889998876544
Q ss_pred eeecCCCCCCCcceEEEEE-C-CEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEE
Q 010571 234 PEIKGDLVTGRAGHAGITI-D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHL 311 (507)
Q Consensus 234 ~~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l 311 (507)
.... .....+++.. + +.+++.+|.... .+.+||..+.. .+..+.+. ......+.+..+..+
T Consensus 316 ~~~~-----~~~v~~~~~~~~~~~lv~~sg~~d~----~I~iwd~~~~~--~v~~l~gH------~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 316 AVDA-----HSQVCSILWSPHYKELISGHGFAQN----QLVIWKYPTMA--KVAELKGH------TSRVLSLTMSPDGAT 378 (420)
T ss_dssp EEEC-----SSCEEEEEEETTTTEEEEEECTTTC----CEEEEETTTCC--EEEEECCC------SSCEEEEEECTTSSC
T ss_pred eecc-----ccceeeeeecCCCCeEEEEEecCCC----EEEEEECCCCc--EEEEEcCC------CCCEEEEEEcCCCCE
Confidence 2211 1111122222 3 345554453322 47888887653 33333221 112333344444456
Q ss_pred EEEcccCCCcCCeEEEEECC
Q 010571 312 VAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 312 ~v~GG~~~~~~~~v~~~~~~ 331 (507)
++.||.+ ..|.++|+.
T Consensus 379 l~S~s~D----~tvriWdv~ 394 (420)
T 4gga_A 379 VASAAAD----ETLRLWRCF 394 (420)
T ss_dssp EEEEETT----TEEEEECCS
T ss_pred EEEEecC----CeEEEEECC
Confidence 6667755 345566653
No 86
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.45 E-value=0.87 Score=48.11 Aligned_cols=252 Identities=10% Similarity=0.015 Sum_probs=123.6
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCC--
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKK-- 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~-- 112 (507)
++..++|+...++.....++++|+.++......... .. ...+.+ +++.++++.....
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-----------------~~--~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-----------------VK--FSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-----------------EC--SCCEEECTTSSEEEEEECCCCSS
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-----------------cc--cceEEEEeCCCEEEEEEECCccc
Confidence 455555543322222347999999999876643211 11 122222 4443344333221
Q ss_pred --------CCCcceEEEEECCCCcEE--EeecCCCCCCCcccceEEEE-CC-EEEEEcCcCCCCCccCcEEEEEcCC---
Q 010571 113 --------SSDSMIVRFIDLETNLCG--VMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLET--- 177 (507)
Q Consensus 113 --------~~~~~~~~~~d~~t~~W~--~~~~~g~~p~~r~~~~~~~~-~~-~l~~~GG~~~~~~~~~~~~~~d~~t--- 177 (507)
......++.+++.+.... .+.. ....+........- ++ +|++....... ..+.++.+|+.+
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAE--FPDEPKWMGGAELSDDGRYVLLSIREGCD--PVNRLWYCDLQQESN 271 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECSSS--SCCEEEEEEGGGSSS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEec--cCCCCeEEEEEEEcCCCCEEEEEEEccCC--CccEEEEEECccccc
Confidence 022446899999887632 2211 11112111222222 33 55554432211 256899999876
Q ss_pred ---C--cEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC---cEEeeeecCCCCCCCcceEE
Q 010571 178 ---M--TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN---EWSQPEIKGDLVTGRAGHAG 249 (507)
Q Consensus 178 ---~--~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~---~W~~~~~~~~~p~~r~~~~~ 249 (507)
. .+..+... . . .........++.||+.+..+ .....|+.+|+.+. .|+.+.. ..+. ..-...
T Consensus 272 ~~~~~~~~~~l~~~---~-~-~~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~--~~~~-~~~~~~ 341 (710)
T 2xdw_A 272 GITGILKWVKLIDN---F-E-GEYDYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLVP--EHEK-DVLEWV 341 (710)
T ss_dssp SSCSSCCCEEEECS---S-S-SCEEEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEEC--CCSS-CEEEEE
T ss_pred ccCCccceEEeeCC---C-C-cEEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceeccC--CCCC-CeEEEE
Confidence 4 57777531 1 1 11222333456677776542 22357999998875 4877632 1111 112233
Q ss_pred EEE-CCEEEEEeccCCCCCcceEEEEEcCcCe-eEEeccCCCCCCCCCCCCceEEEEE-cCceEEEEEcccCCCcCCeEE
Q 010571 250 ITI-DENWYIVGGGDNNNGCQETIVLNMTKLA-WSILTSVKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGKYNNEVF 326 (507)
Q Consensus 250 ~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~~-W~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~v~ 326 (507)
... ++.+++....+ ....++++|+.++. ...+... .+. ...+.. +++..|+ +...+......+|
T Consensus 342 ~~~~~~~lv~~~~~~---g~~~l~~~~~~~g~~~~~l~~~--------~~~-v~~~~~s~d~~~l~-~~~ss~~~P~~i~ 408 (710)
T 2xdw_A 342 ACVRSNFLVLCYLHD---VKNTLQLHDLATGALLKIFPLE--------VGS-VVGYSGQKKDTEIF-YQFTSFLSPGIIY 408 (710)
T ss_dssp EEETTTEEEEEEEET---TEEEEEEEETTTCCEEEEECCC--------SSE-EEEEECCTTCSEEE-EEEECSSCCCEEE
T ss_pred EEEcCCEEEEEEEEC---CEEEEEEEECCCCCEEEecCCC--------Cce-EEEEecCCCCCEEE-EEEeCCCCCCEEE
Confidence 344 56676665432 24568899985543 4444321 122 222222 2233333 3333334567899
Q ss_pred EEECCCCC
Q 010571 327 VMRLKPRD 334 (507)
Q Consensus 327 ~~~~~~~~ 334 (507)
.||+.+..
T Consensus 409 ~~d~~tg~ 416 (710)
T 2xdw_A 409 HCDLTKEE 416 (710)
T ss_dssp EEETTSSS
T ss_pred EEECCCCc
Confidence 99987655
No 87
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.44 E-value=0.55 Score=43.24 Aligned_cols=242 Identities=10% Similarity=-0.077 Sum_probs=121.2
Q ss_pred cceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEE-ECCEEEEE
Q 010571 30 KHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLIL 106 (507)
Q Consensus 30 ~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~iyv~ 106 (507)
..+.+.. ++.||+.+.. ...+++||+.++ ...+.... ..-++++. -+++||+.
T Consensus 30 ~eg~~~d~~g~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~~------------------~~~~~l~~~~dg~l~v~ 85 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHPS------------------HHQNGHCLNKQGHLIAC 85 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGG-----GTEEEEEETTSC-EEEEESSC------------------SSEEEEEECTTCCEEEE
T ss_pred ccCCeEeCCCCEEEEEeCC-----CCEEEEEECCCC-eEEEECCC------------------CCcceeeECCCCcEEEE
Confidence 3444444 4458887653 346899999988 55443211 11123332 25778776
Q ss_pred cccCCCCCCcceEEEEECCCCcEEEeecCC-CCCCCcccceEEEECCEEEEE----cCcCC-------CCCccCcEEEEE
Q 010571 107 GGHYKKSSDSMIVRFIDLETNLCGVMETSG-KVPVARGGHSVTLVGSRLIIF----GGEDR-------SRKLLNDVHFLD 174 (507)
Q Consensus 107 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g-~~p~~r~~~~~~~~~~~l~~~----GG~~~-------~~~~~~~~~~~d 174 (507)
... ...+.+||+.+++...+.... ..+..+....++.-++.+|+. |.... .......++.||
T Consensus 86 ~~~------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 86 SHG------LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp ETT------TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred ecC------CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 431 235999999898887664210 111111111222225678875 43210 011134799999
Q ss_pred cCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECC-CCcE-EeeeecCCCCCCCcceEEEE-
Q 010571 175 LETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEW-SQPEIKGDLVTGRAGHAGIT- 251 (507)
Q Consensus 175 ~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~-~~~W-~~~~~~~~~p~~r~~~~~~~- 251 (507)
+. ++...+.. ... ...+++...++.+++.+... +.+++|++. ++.. ...... ....... .+++.
T Consensus 160 ~~-g~~~~~~~--~~~---~~~gi~~s~dg~~lv~~~~~-----~~i~~~~~~~~g~~~~~~~~~-~~~~~~p-~~i~~d 226 (296)
T 3e5z_A 160 PD-GTLSAPIR--DRV---KPNGLAFLPSGNLLVSDTGD-----NATHRYCLNARGETEYQGVHF-TVEPGKT-DGLRVD 226 (296)
T ss_dssp TT-SCEEEEEC--CCS---SEEEEEECTTSCEEEEETTT-----TEEEEEEECSSSCEEEEEEEE-CCSSSCC-CSEEEB
T ss_pred CC-CCEEEeec--CCC---CCccEEECCCCCEEEEeCCC-----CeEEEEEECCCCcCcCCCeEe-eCCCCCC-CeEEEC
Confidence 87 66555432 111 11234444455555444322 578999986 5555 221111 1111111 12222
Q ss_pred ECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 252 IDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 252 ~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
-++++|+..+ +.+.+||+.......+.... +...+.+.-++...|++... ..+|.|++.
T Consensus 227 ~~G~l~v~~~-------~~v~~~~~~g~~~~~~~~~~--------~~~~~~f~~~d~~~L~v~t~------~~l~~~~~~ 285 (296)
T 3e5z_A 227 AGGLIWASAG-------DGVHVLTPDGDELGRVLTPQ--------TTSNLCFGGPEGRTLYMTVS------TEFWSIETN 285 (296)
T ss_dssp TTSCEEEEET-------TEEEEECTTSCEEEEEECSS--------CCCEEEEESTTSCEEEEEET------TEEEEEECS
T ss_pred CCCCEEEEcC-------CeEEEECCCCCEEEEEECCC--------CceeEEEECCCCCEEEEEcC------CeEEEEEcc
Confidence 2567887751 25889998866555443221 11111111234456777542 369999987
Q ss_pred CCCC
Q 010571 332 PRDI 335 (507)
Q Consensus 332 ~~~w 335 (507)
+..-
T Consensus 286 ~~~~ 289 (296)
T 3e5z_A 286 VRGL 289 (296)
T ss_dssp CCBC
T ss_pred cccc
Confidence 6644
No 88
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.42 E-value=0.78 Score=44.77 Aligned_cols=223 Identities=13% Similarity=0.114 Sum_probs=110.3
Q ss_pred CceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEE
Q 010571 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 130 (507)
Q Consensus 53 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~ 130 (507)
+.|+++|..++....+-.... ......++.+ ++.+++.|+.+. .+.++|+.+++-.
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~----------------~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~ 182 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQ----------------PGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRL 182 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCS----------------TTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecC----------------CCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEE
Confidence 468999999987665543321 1222233333 566777776532 3889999887643
Q ss_pred EeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEe
Q 010571 131 VMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 131 ~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~G 210 (507)
... ... .....+...++.+++.|+.+ ..+..+|..+.........+. ......+....++..++.|
T Consensus 183 ~~~---~~h--~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h---~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 183 RNM---TSH--SARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGH---SQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp EEE---CCC--SSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEE
T ss_pred EEE---eCC--CCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccc---ccceeeeeecCCCCeeeee
Confidence 332 111 12223444566777777653 357777776544333222111 1111223333445466666
Q ss_pred CCCCCcCCCcEEEEECCCCcEE--eeeecCCCCCCCcceEEEEE---CCEEEEEeccCCCCCcceEEEEEcCcCeeEEec
Q 010571 211 GCSHSIFFNDLHVLDLQTNEWS--QPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 211 G~~~~~~~~~i~~~d~~~~~W~--~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~ 285 (507)
+.+ +.+.+++..+..-. .+.. .........+..+ +..+++.+|...+. .+.++|+.+..-....
T Consensus 249 ~~D-----~~v~i~~~~~~~~~~~~~~~---~~~~~~~V~~~~~~p~~~~~la~~~gs~D~---~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 249 GND-----NLVNVWPSAPGEGGWVPLQT---FTQHQGAVKAVAWCPWQSNVLATGGGTSDR---HIRIWNVCSGACLSAV 317 (420)
T ss_dssp ETT-----SCEEEEESSCCSSCSCCSEE---ECCCSSCEEEEEECTTCTTEEEEEECTTTC---EEEEEETTTTEEEEEE
T ss_pred ecc-----ccceEEeeccccccceeeee---ecccCCceeeeeeCCCcccEEEEEeecCCC---EEEEEeCCccccceee
Confidence 654 45677776654311 1100 0011111122222 34566555433222 4778898877644322
Q ss_pred cCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 286 SVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 286 ~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
... ......+..+....+++.+|.. ...+.++|+.+.
T Consensus 318 ~~~--------~~v~~~~~~~~~~~lv~~sg~~---d~~I~iwd~~~~ 354 (420)
T 4gga_A 318 DAH--------SQVCSILWSPHYKELISGHGFA---QNQLVIWKYPTM 354 (420)
T ss_dssp ECS--------SCEEEEEEETTTTEEEEEECTT---TCCEEEEETTTC
T ss_pred ccc--------cceeeeeecCCCCeEEEEEecC---CCEEEEEECCCC
Confidence 211 1122233344555676666643 346788887543
No 89
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.42 E-value=0.92 Score=47.62 Aligned_cols=132 Identities=16% Similarity=0.107 Sum_probs=74.3
Q ss_pred cceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEc
Q 010571 30 KHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILG 107 (507)
Q Consensus 30 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~G 107 (507)
..+-++.++.||+... ...++.+|..|++ |+.-...... .. ..........+.++.+++||+..
T Consensus 59 ~~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~v~v~~ 124 (668)
T 1kv9_A 59 EATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKV-----KA---RTSCCDAVNRGVALWGDKVYVGT 124 (668)
T ss_dssp CCCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGG-----GG---GGCTTCSCCCCCEEEBTEEEEEC
T ss_pred ccCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCcc-----cc---ccccccCCccceEEECCEEEEEc
Confidence 3445667999999865 3469999999874 8764332210 00 00000011233456788888764
Q ss_pred ccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCc--EEEe
Q 010571 108 GHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAV 183 (507)
Q Consensus 108 G~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~--W~~~ 183 (507)
. ...++.+|..|++ |+..... .........+.++.++.+|+-.+... ......++.||+.|++ |+.-
T Consensus 125 ~-------dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 125 L-------DGRLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVVKGKVIIGNGGAE-YGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred C-------CCEEEEEECCCCCEeeeeccCC-CCCcceecCCCEEECCEEEEeCCCCC-cCCCCEEEEEECCCCcEEEEec
Confidence 2 2359999998885 8765411 11111222234556888776432211 1124579999998875 8765
Q ss_pred e
Q 010571 184 E 184 (507)
Q Consensus 184 ~ 184 (507)
.
T Consensus 196 ~ 196 (668)
T 1kv9_A 196 T 196 (668)
T ss_dssp S
T ss_pred c
Confidence 4
No 90
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.39 E-value=0.65 Score=43.56 Aligned_cols=186 Identities=12% Similarity=0.114 Sum_probs=95.2
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
++.+++.|+.+ ..+.++|+.++.-...... .+.. ..+++.. ++..++.|+.+ ..+.+||+.+.
T Consensus 91 ~~~~l~s~s~D------~~i~lWd~~~~~~~~~~~~--~~~~--~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~ 154 (321)
T 3ow8_A 91 TLPIAASSSLD------AHIRLWDLENGKQIKSIDA--GPVD--AWTLAFSPDSQYLATGTHV------GKVNIFGVESG 154 (321)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEEC--CTTC--CCCEEECTTSSEEEEECTT------SEEEEEETTTC
T ss_pred CCCEEEEEeCC------CcEEEEECCCCCEEEEEeC--CCcc--EEEEEECCCCCEEEEEcCC------CcEEEEEcCCC
Confidence 34566666543 3488899988764433211 1111 1122222 45666666643 35888998876
Q ss_pred cEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEE
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENW 256 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l 256 (507)
.-...-. .......+++...++.+++.|+.+ ..+.+||+.++.-...- .+ ....-.++.+ ++.+
T Consensus 155 ~~~~~~~----~~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~~-~~----h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 155 KKEYSLD----TRGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLHTL-EG----HAMPIRSLTFSPDSQL 220 (321)
T ss_dssp SEEEEEE----CSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE-CC----CSSCCCEEEECTTSCE
T ss_pred ceeEEec----CCCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEE-cc----cCCceeEEEEcCCCCE
Confidence 5433221 111122234444566677777765 45889999887643321 11 1111122333 5677
Q ss_pred EEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 257 YIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 257 ~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
++.|+.++ .+.+||+.+...... +.+. ......+.+..+..+++.|+.+ ..+.++|+.+
T Consensus 221 l~s~s~dg-----~i~iwd~~~~~~~~~--~~~h------~~~v~~~~~sp~~~~l~s~s~D----~~v~iwd~~~ 279 (321)
T 3ow8_A 221 LVTASDDG-----YIKIYDVQHANLAGT--LSGH------ASWVLNVAFCPDDTHFVSSSSD----KSVKVWDVGT 279 (321)
T ss_dssp EEEECTTS-----CEEEEETTTCCEEEE--ECCC------SSCEEEEEECTTSSEEEEEETT----SCEEEEETTT
T ss_pred EEEEcCCC-----eEEEEECCCcceeEE--EcCC------CCceEEEEECCCCCEEEEEeCC----CcEEEEeCCC
Confidence 77777543 378889876654321 2111 1122333444333456667754 3577777654
No 91
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.37 E-value=0.12 Score=48.03 Aligned_cols=229 Identities=8% Similarity=0.048 Sum_probs=109.9
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-C-CEEEEEcCCCCCccCCceEEEECCCCceeEe-eeccccccCcc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-D-QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNL-RLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~-~~~~~~~~~~~ 79 (507)
...++||+.++.+..+...........-++++.. + +.||+... .+.+++||+. ++...+ .....
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~------~~~l~~~d~~-g~~~~~~~~~~~------ 112 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM------RLGLLVVQTD-GTFEEIAKKDSE------ 112 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET------TTEEEEEETT-SCEEECCSBCTT------
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC------CCCEEEEeCC-CCEEEEEeccCC------
Confidence 3477889888888766520000011122333333 4 67888754 1368999998 776554 32110
Q ss_pred ccCCccCCCCCccceeeEE-ECCEEEEEcccC---------CCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEE
Q 010571 80 EDSGLLEVLPPMSDHCMVK-WGTKLLILGGHY---------KKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL 149 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~---------~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~ 149 (507)
..+ ...-+.++. -+++||+..... ........++.||+. ++...+.. ....+ ..++.
T Consensus 113 ------~~~-~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~~---~~i~~ 179 (314)
T 1pjx_A 113 ------GRR-MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQFP---NGIAV 179 (314)
T ss_dssp ------SCB-CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EESSE---EEEEE
T ss_pred ------Ccc-ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCCCc---ceEEE
Confidence 001 111122222 267788765432 111123569999987 66655431 11111 22333
Q ss_pred E----C-C-EEEEEcCcCCCCCccCcEEEEEcC-CCcEEEeecCCCCCCC--CCCceEEEEcCcEEEEEeCCCCCcCCCc
Q 010571 150 V----G-S-RLIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVEVTQTPPAP--RYDHSAALHANRYLIVFGGCSHSIFFND 220 (507)
Q Consensus 150 ~----~-~-~l~~~GG~~~~~~~~~~~~~~d~~-t~~W~~~~~~g~~p~~--r~~~~~~~~~~~~l~i~GG~~~~~~~~~ 220 (507)
. . + .+|+.... .+.+++||+. +++..........+.. ..-..++...++.+|+..... +.
T Consensus 180 ~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~-----~~ 248 (314)
T 1pjx_A 180 RHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS-----SH 248 (314)
T ss_dssp EECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-----TE
T ss_pred ecccCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-----CE
Confidence 3 2 3 46665432 3468899876 4444322111111111 111234444566688764321 46
Q ss_pred EEEEECCCCcEE-eeeecCCCCCCCcceEEEEE--CCE-EEEEeccCCCCCcceEEEEEcCcC
Q 010571 221 LHVLDLQTNEWS-QPEIKGDLVTGRAGHAGITI--DEN-WYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 221 i~~~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
+.+||+.++... .+. .+. ....++.+ +++ ||+....+ +.+++|++...
T Consensus 249 i~~~d~~~g~~~~~~~----~~~--~~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~ 300 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIR----CPF--EKPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRN 300 (314)
T ss_dssp EEEECTTCBSCSEEEE----CSS--SCEEEEEECTTSSEEEEEETTT-----TEEEEEECSSC
T ss_pred EEEEcCCCCcEeEEEe----CCC--CCceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCC
Confidence 899998754422 221 121 12233333 344 66654322 36888887653
No 92
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.35 E-value=0.089 Score=50.18 Aligned_cols=185 Identities=9% Similarity=0.050 Sum_probs=95.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++.+++.||.+. .+.++|..++.|...... .........++.+ ++..++.|+.+. .+.++|..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVL--SEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEE--CSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeee--ccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccC
Confidence 667777777543 377888888877643311 0111111222333 456677777543 477788877
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc-EEeeeecCCCCCCCcceEEEEE--CC
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI--DE 254 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~--~~ 254 (507)
..+..+..... ....-.+++...++.+++.|+.+ ..+.++|+.+.. +..+.... ........+.+ ++
T Consensus 93 ~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 93 DDFECVTTLEG--HENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLN---SHTQDVKHVVWHPSQ 162 (345)
T ss_dssp C-EEEEEEECC--CSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEEC---CCCSCEEEEEECSSS
T ss_pred CCeEEEEEccC--CCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEec---CcCCCeEEEEECCCC
Confidence 76654432111 11111233334556577777765 357888876542 33322111 11111223333 45
Q ss_pred EEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCC
Q 010571 255 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 319 (507)
Q Consensus 255 ~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~ 319 (507)
.+++.|+.++ .+.+||..+..|..+..+.+. ......+.+..+..+++.|+.++
T Consensus 163 ~~l~s~s~d~-----~i~~w~~~~~~~~~~~~~~~h------~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 163 ELLASASYDD-----TVKLYREEEDDWVCCATLEGH------ESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SCEEEEETTS-----CEEEEEEETTEEEEEEEECCC------SSCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEeCCC-----cEEEEEecCCCEEEEEEecCC------CCceEEEEECCCCCEEEEEeCCC
Confidence 6777777543 377888888888765444322 12233344444445666677553
No 93
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.33 E-value=0.6 Score=43.57 Aligned_cols=236 Identities=11% Similarity=0.067 Sum_probs=107.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
++.+++.|+.+ ..+..++.............. ...........+..++.|+.+.
T Consensus 97 dg~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~s~s~d~----- 150 (340)
T 4aow_A 97 DGQFALSGSWD-----GTLRLWDLTTGTTTRRFVGHT----------------KDVLSVAFSSDNRQIVSGSRDK----- 150 (340)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS----------------SCEEEEEECTTSSCEEEEETTS-----
T ss_pred CCCEEEEEccc-----ccceEEeecccceeeeecCCC----------------CceeEEEEeecCccceeecCCC-----
Confidence 45556666633 346777777765544433221 1111111122445556665432
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEE----CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
.+.++|.....-..... .........+.+ .+.+++.||.+ ..+.++|+.+.+...... + ..
T Consensus 151 -~~~~~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~s~~~d------~~i~i~d~~~~~~~~~~~-~---h~ 215 (340)
T 4aow_A 151 -TIKLWNTLGVCKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWD------KLVKVWNLANCKLKTNHI-G---HT 215 (340)
T ss_dssp -CEEEECTTSCEEEEECS----SSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTTEEEEEEC-C---CS
T ss_pred -eEEEEEeCCCceEEEEe----ccccCcccceEEccCCCCcEEEEEcCC------CEEEEEECCCCceeeEec-C---CC
Confidence 36677776554333221 111111222222 12455556543 258889988776544321 1 11
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEE
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETI 272 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~ 272 (507)
..-.+++...++.+++.|+.+ ..+.+||+.+..-..... . ...-.+++...+..++.++.++ .+.
T Consensus 216 ~~v~~~~~s~~~~~l~s~s~D-----g~i~iwd~~~~~~~~~~~-~----~~~v~~~~~~~~~~~~~~~~d~-----~i~ 280 (340)
T 4aow_A 216 GYLNTVTVSPDGSLCASGGKD-----GQAMLWDLNEGKHLYTLD-G----GDIINALCFSPNRYWLCAATGP-----SIK 280 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEEEEEEE-C----SSCEEEEEECSSSSEEEEEETT-----EEE
T ss_pred CcEEEEEECCCCCEEEEEeCC-----CeEEEEEeccCceeeeec-C----CceEEeeecCCCCceeeccCCC-----EEE
Confidence 111233344556677777765 358888987765433211 1 1111122222344455555332 477
Q ss_pred EEEcCcCeeEE-eccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 273 VLNMTKLAWSI-LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 273 ~~d~~~~~W~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
+||+.+..-.. +..................+.+..+..+++.||.++ .|.++|+.+
T Consensus 281 iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg----~v~iW~~~t 337 (340)
T 4aow_A 281 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN----LVRVWQVTI 337 (340)
T ss_dssp EEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS----CEEEEEEEC
T ss_pred EEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC----EEEEEeCCC
Confidence 88887664322 111110001111112233334444444566677653 466666644
No 94
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.58 Score=44.15 Aligned_cols=197 Identities=12% Similarity=0.098 Sum_probs=94.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||..++.-...-.. .......+.+ ++..++.|+.+
T Consensus 43 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~------------------h~~~v~~~~~~~~~~~l~s~~~d---- 95 (369)
T 3zwl_B 43 EGDLLFSCSKD-----SSASVWYSLNGERLGTLDG------------------HTGTIWSIDVDCFTKYCVTGSAD---- 95 (369)
T ss_dssp TSCEEEEEESS-----SCEEEEETTTCCEEEEECC------------------CSSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCchhhhhhhh------------------cCCcEEEEEEcCCCCEEEEEeCC----
Confidence 45566666633 4688999887654332211 1112222233 45666666642
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCc----EEEeecCC--
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMT----WDAVEVTQ-- 187 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~----W~~~~~~g-- 187 (507)
..+.+||+.++....... .+.+ -.++... ++..++.++.+.. .....+..||+.+.. +.......
T Consensus 96 --g~i~iwd~~~~~~~~~~~---~~~~--v~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 96 --YSIKLWDVSNGQCVATWK---SPVP--VKRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp --TEEEEEETTTCCEEEEEE---CSSC--EEEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred --CeEEEEECCCCcEEEEee---cCCC--eEEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCccceeecccccceee
Confidence 358899998886554431 1111 1122222 3445555543311 113467778775432 22211000
Q ss_pred --CCCCCC-CCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCC-CcEEeeeecCCCCCCCcceEEEEE--CCEEEEEec
Q 010571 188 --TPPAPR-YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGG 261 (507)
Q Consensus 188 --~~p~~r-~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG 261 (507)
...... ...+++...++.+++.|+.+ ..+.+||+.+ ..-...-. + .......+.+ ++.+++.|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSNNYEYVDSID-L----HEKSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTTTTEEEEEEE-C----CSSCEEEEEECTTSSEEEEEE
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCCCcEeEEEEe-c----CCCceeEEEECCCCCEEEEec
Confidence 000000 12223333455566666654 4689999987 33222111 1 1111223333 556677766
Q ss_pred cCCCCCcceEEEEEcCcCeeEE
Q 010571 262 GDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 262 ~~~~~~~~d~~~~d~~~~~W~~ 283 (507)
.++ .+.+||+.+..-..
T Consensus 238 ~d~-----~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 238 RDT-----NSFLVDVSTLQVLK 254 (369)
T ss_dssp TTS-----EEEEEETTTCCEEE
T ss_pred CCc-----eEEEEECCCCceee
Confidence 432 58889988765443
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.27 E-value=0.14 Score=49.12 Aligned_cols=151 Identities=11% Similarity=0.125 Sum_probs=71.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.|..+..... .......+.+ ++.+++.|+.+.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~s~~~~~l~s~s~d~--- 77 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSD----------------HDKIVTCVDWAPKSNRIVTCSQDR--- 77 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCC----------------CSSCEEEEEECTTTCCEEEEETTS---
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEec----------------CCceEEEEEEeCCCCEEEEEeCCC---
Confidence 45566666643 457789998887766654431 1112223333 456677776432
Q ss_pred CcceEEEEECCCCc-EEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCc-EEEeecCCCCC
Q 010571 115 DSMIVRFIDLETNL-CGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPP 190 (507)
Q Consensus 115 ~~~~~~~~d~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~g~~p 190 (507)
.+.+||+.++. |..... .........++.+ ++.+++.|+.+ ..+.+||+.+.+ |...... ..+
T Consensus 78 ---~v~vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~-~~~ 144 (377)
T 3dwl_C 78 ---NAYVYEKRPDGTWKQTLV---LLRLNRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHL-KRP 144 (377)
T ss_dssp ---SEEEC------CCCCEEE---CCCCSSCEEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEE-CSS
T ss_pred ---eEEEEEcCCCCceeeeeE---ecccCCceEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEe-ecc
Confidence 38888888776 443331 1111112222222 45666666653 248888887654 2222111 111
Q ss_pred CCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
....-.+++...++.+++.|+.+ ..+.+||+.+.
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~ 178 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCAD-----RKAYVLSAYVR 178 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESS-----SCEEEEEECCS
T ss_pred cCCCeEEEEEcCCCCEEEEEeCC-----CEEEEEEEEec
Confidence 12222233444555577777764 35788887543
No 96
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.25 E-value=0.81 Score=43.20 Aligned_cols=166 Identities=14% Similarity=0.108 Sum_probs=84.0
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCC
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 195 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~ 195 (507)
.+.+||+.++.-...- ........++.+ ++.+++.|+.+ ..+.++|+.+..-...-. + ....-
T Consensus 165 ~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sg~~d------~~v~~wd~~~~~~~~~~~-~---h~~~v 229 (340)
T 1got_B 165 TCALWDIETGQQTTTF-----TGHTGDVMSLSLAPDTRLFVSGACD------ASAKLWDVREGMCRQTFT-G---HESDI 229 (340)
T ss_dssp CEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCSEEEEEC-C---CSSCE
T ss_pred cEEEEECCCCcEEEEE-----cCCCCceEEEEECCCCCEEEEEeCC------CcEEEEECCCCeeEEEEc-C---CcCCE
Confidence 4889999887644322 111111122222 45677777754 358889988765433221 1 11112
Q ss_pred ceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEE
Q 010571 196 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIV 273 (507)
Q Consensus 196 ~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~ 273 (507)
.+++...++.+++.|+.+ ..+.+||+.+..-.... . .+.......++.+ ++.+++.|+.++ .+.+
T Consensus 230 ~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~--~-~~~~~~~v~~~~~s~~g~~l~~g~~d~-----~i~v 296 (340)
T 1got_B 230 NAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTY--S-HDNIICGITSVSFSKSGRLLLAGYDDF-----NCNV 296 (340)
T ss_dssp EEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE--C-CTTCCSCEEEEEECTTSSEEEEEETTS-----EEEE
T ss_pred EEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEE--c-cCCcccceEEEEECCCCCEEEEECCCC-----eEEE
Confidence 233444566677777765 35888998876533211 1 1111122233334 456777776443 4788
Q ss_pred EEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCC
Q 010571 274 LNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 319 (507)
Q Consensus 274 ~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~ 319 (507)
||..+..- +..+.+. ......+.+..+..+++.||.++
T Consensus 297 wd~~~~~~--~~~~~~h------~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 297 WDALKADR--AGVLAGH------DNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EETTTCCE--EEEEECC------SSCEEEEEECTTSSCEEEEETTS
T ss_pred EEcccCcE--eeEeecC------CCcEEEEEEcCCCCEEEEEcCCc
Confidence 88766532 2222111 11233334444445666777654
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.24 E-value=0.39 Score=51.43 Aligned_cols=187 Identities=13% Similarity=0.036 Sum_probs=93.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++..++.|+. ...+.+||..++.....-... ......+.+ ++..++.|+.+
T Consensus 66 ~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~d---- 118 (814)
T 3mkq_A 66 RKNWIIVGSD-----DFRIRVFNYNTGEKVVDFEAH------------------PDYIRSIAVHPTKPYVLSGSDD---- 118 (814)
T ss_dssp GGTEEEEEET-----TSEEEEEETTTCCEEEEEECC------------------SSCEEEEEECSSSSEEEEEETT----
T ss_pred CCCEEEEEeC-----CCeEEEEECCCCcEEEEEecC------------------CCCEEEEEEeCCCCEEEEEcCC----
Confidence 4556666663 246889999887654432211 111222222 45455555532
Q ss_pred CcceEEEEECCCC-cEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 115 DSMIVRFIDLETN-LCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~~d~~t~-~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
..+.+||..++ ....... . ....-.+++.. ++.+++.|+.+ ..+.+||+.+..-...... ..
T Consensus 119 --g~i~vw~~~~~~~~~~~~~--~--~~~~v~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~---~~ 183 (814)
T 3mkq_A 119 --LTVKLWNWENNWALEQTFE--G--HEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTT---GQ 183 (814)
T ss_dssp --SEEEEEEGGGTSEEEEEEE--C--CSSCEEEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEEC---CC
T ss_pred --CEEEEEECCCCceEEEEEc--C--CCCcEEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEec---CC
Confidence 34888888776 3222211 1 11111223333 34677777653 3588999866543222211 11
Q ss_pred CCCCceEEEEc--CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCC
Q 010571 192 PRYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNG 267 (507)
Q Consensus 192 ~r~~~~~~~~~--~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~ 267 (507)
......++... ++.+++.|+.+ ..+.+||+.+..-...-. + ......++.+ ++.+++.|+.++
T Consensus 184 ~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~l~~~~~dg--- 250 (814)
T 3mkq_A 184 ERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVATLE-G----HMSNVSFAVFHPTLPIIISGSEDG--- 250 (814)
T ss_dssp TTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEEEE-C----CSSCEEEEEECSSSSEEEEEETTS---
T ss_pred CCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEEEc-C----CCCCEEEEEEcCCCCEEEEEeCCC---
Confidence 12222333333 55577777754 368899988765433111 1 1111223333 456777777543
Q ss_pred cceEEEEEcCcCe
Q 010571 268 CQETIVLNMTKLA 280 (507)
Q Consensus 268 ~~d~~~~d~~~~~ 280 (507)
.+.+||+.+..
T Consensus 251 --~v~vwd~~~~~ 261 (814)
T 3mkq_A 251 --TLKIWNSSTYK 261 (814)
T ss_dssp --CEEEEETTTCS
T ss_pred --eEEEEECCCCc
Confidence 37788877654
No 98
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.16 E-value=1 Score=43.56 Aligned_cols=105 Identities=13% Similarity=0.051 Sum_probs=54.9
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcE-EEEEeCCCCCcCCCcEEEEECCCC
Q 010571 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRY-LIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 151 ~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~-l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++.+++.|+.+ ..+.+||+.+..-...... .....-.+++...++. +++.|+.+ ..+.+||+.+.
T Consensus 258 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~ 323 (420)
T 3vl1_A 258 YGKYVIAGHVS------GVITVHNVFSKEQTIQLPS---KFTCSCNSLTVDGNNANYIYAGYEN-----GMLAQWDLRSP 323 (420)
T ss_dssp TTEEEEEEETT------SCEEEEETTTCCEEEEECC---TTSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCceeEEccc---ccCCCceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCCC
Confidence 45666776653 3599999987764333211 1111122333334444 66677654 46889998775
Q ss_pred cE--EeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCc
Q 010571 230 EW--SQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 230 ~W--~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~ 278 (507)
.- ..+.. . ....-.+++..++.+++.|+.++ .+.++|+.+
T Consensus 324 ~~~~~~~~~--~--~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~~ 365 (420)
T 3vl1_A 324 ECPVGEFLI--N--EGTPINNVYFAAGALFVSSGFDT-----SIKLDIISD 365 (420)
T ss_dssp TSCSEEEEE--S--TTSCEEEEEEETTEEEEEETTTE-----EEEEEEECC
T ss_pred cCchhhhhc--c--CCCCceEEEeCCCCEEEEecCCc-----cEEEEeccC
Confidence 32 22211 0 11111233344677888877443 366777554
No 99
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.15 E-value=0.54 Score=44.77 Aligned_cols=184 Identities=14% Similarity=0.100 Sum_probs=90.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~ 176 (507)
+++.++.|+.+. .+.++|+.+++-...- ......-.++.+ +..+++.|+.+ +.+.++|+.
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~~~-----~~h~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLSSY-----RAHAAQVTCVAASPHKDSVFLSCSED------NRILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEE-----CCCSSCEEEEEECSSCTTEEEEEETT------SCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEE-----cCcCCceEEEEecCCCCCceeeeccc------ccccccccc
Confidence 566777776533 3889999887543322 111111122223 23577777754 258899998
Q ss_pred CCcEEEeecCCCCCCCCCCceEEE-Ec-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--
Q 010571 177 TMTWDAVEVTQTPPAPRYDHSAAL-HA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 252 (507)
Q Consensus 177 t~~W~~~~~~g~~p~~r~~~~~~~-~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 252 (507)
+.+-...-. ..........+. .. ++.+++.|+.+ ..|.+||+.+..-... +......-.++.+
T Consensus 201 ~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~~~~~-----~~~h~~~v~~v~fsp 267 (344)
T 4gqb_B 201 CPKPASQIG---CSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTSCVLS-----SAVHSQCVTGLVFSP 267 (344)
T ss_dssp SSSCEEECC-------CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC--CCEE-----EECCSSCEEEEEECS
T ss_pred ccceeeeee---cceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCcEEEE-----EcCCCCCEEEEEEcc
Confidence 776433221 111111112222 22 44577777754 3588889876532110 1111111223333
Q ss_pred CC-EEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEE-cCceEEEEEcccCCCcCCeEEEEEC
Q 010571 253 DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 253 ~~-~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
++ .+++.|+.++ .+.++|..+..-..+. + +......+.+ +.+..|++.||.++ .|..+++
T Consensus 268 ~g~~~lasgs~D~-----~i~vwd~~~~~~~~~~---~------H~~~V~~v~~sp~~~~llas~s~D~----~v~~w~v 329 (344)
T 4gqb_B 268 HSVPFLASLSEDC-----SLAVLDSSLSELFRSQ---A------HRDFVRDATWSPLNHSLLTTVGWDH----QVVHHVV 329 (344)
T ss_dssp SSSCCEEEEETTS-----CEEEECTTCCEEEEEC---C------CSSCEEEEEECSSSTTEEEEEETTS----CEEEEEC
T ss_pred CCCeEEEEEeCCC-----eEEEEECCCCcEEEEc---C------CCCCEEEEEEeCCCCeEEEEEcCCC----eEEEEEC
Confidence 23 4666666443 3778888877533321 1 1112333333 34456777788664 4555555
Q ss_pred C
Q 010571 331 K 331 (507)
Q Consensus 331 ~ 331 (507)
.
T Consensus 330 ~ 330 (344)
T 4gqb_B 330 P 330 (344)
T ss_dssp C
T ss_pred C
Confidence 4
No 100
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.12 E-value=0.71 Score=45.02 Aligned_cols=148 Identities=11% Similarity=0.091 Sum_probs=77.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
.+.+++.|+.+ ..+.+||..++.....-.. .......+.+ ++.+++.||.+..
T Consensus 119 ~~~~l~s~s~D-----g~i~vwd~~~~~~~~~l~~------------------h~~~V~~v~~~~~~~~l~sgs~D~~-- 173 (410)
T 1vyh_C 119 VFSVMVSASED-----ATIKVWDYETGDFERTLKG------------------HTDSVQDISFDHSGKLLASCSADMT-- 173 (410)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEEECC------------------CSSCEEEEEECTTSSEEEEEETTSC--
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEec------------------cCCcEEEEEEcCCCCEEEEEeCCCe--
Confidence 34566666643 4588999988764332111 1111222223 5667777775432
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
+.+||+.+..-. . .+........++.+ ++..++.|+.+ ..+.++|+.++.-...-. +. .
T Consensus 174 ----i~iwd~~~~~~~--~---~~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~-~h---~ 234 (410)
T 1vyh_C 174 ----IKLWDFQGFECI--R---TMHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTFT-GH---R 234 (410)
T ss_dssp ----CCEEETTSSCEE--E---CCCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEE-CC---S
T ss_pred ----EEEEeCCCCcee--E---EEcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEe-CC---C
Confidence 567787765432 2 11111112223333 44566667653 358899998876433221 11 1
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
..-..+....++.+++.|+.+ ..+.+||+.+.....
T Consensus 235 ~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCSND-----QTVRVWVVATKECKA 270 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEE
T ss_pred ccEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCceee
Confidence 111122333455577777765 457888887765443
No 101
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.07 E-value=0.89 Score=42.36 Aligned_cols=184 Identities=13% Similarity=0.066 Sum_probs=81.5
Q ss_pred eEEEEECC--CCcEEEeecCCCCCCCcccceEEEE-CC-EEEEEcCcCCCCCccCcEEEEEcCCCc-EEEeecCCCCCCC
Q 010571 118 IVRFIDLE--TNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPPAP 192 (507)
Q Consensus 118 ~~~~~d~~--t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~l~~~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~g~~p~~ 192 (507)
.+.+|++. ++++..+.. .+....-..++.. ++ .+|+.+.. .+.+.+||+..+. ...+..... .
T Consensus 61 ~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~---~ 128 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAE---SALPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVVEG---L 128 (343)
T ss_dssp EEEEEEECTTTCCEEEEEE---EECSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEECC---C
T ss_pred eEEEEEecCCCCceeeccc---cccCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCccccccccccC---C
Confidence 46666655 778776542 1111111222222 33 56655432 2358888874222 222221111 1
Q ss_pred CCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECCC-CcEEeee--ecCCCCCCCcceEEEEE--CC-EEEEEeccCCC
Q 010571 193 RYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPE--IKGDLVTGRAGHAGITI--DE-NWYIVGGGDNN 265 (507)
Q Consensus 193 r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~~-~~W~~~~--~~~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~ 265 (507)
...+.++...++ .+|+.+..+ +.+.+||+.+ +....+. .. ..+.. .....+.+ ++ .+|+.+..+
T Consensus 129 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~pdg~~l~~~~~~~-- 199 (343)
T 1ri6_A 129 DGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEV-TTVEG-AGPRHMVFHPNEQYAYCVNELN-- 199 (343)
T ss_dssp TTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEE-ECSTT-CCEEEEEECTTSSEEEEEETTT--
T ss_pred CCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeeccccc-ccCCC-CCcceEEECCCCCEEEEEeCCC--
Confidence 122334444444 566654222 4689999887 6665432 10 11111 11122333 34 466655322
Q ss_pred CCcceEEEEEcC--cCeeEEe---ccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 266 NGCQETIVLNMT--KLAWSIL---TSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 266 ~~~~d~~~~d~~--~~~W~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
..+.+|++. +..+..+ ..++... ............+++..|++.+.. ...+.+|++.
T Consensus 200 ---~~i~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~i~~s~dg~~l~v~~~~----~~~i~v~d~~ 261 (343)
T 1ri6_A 200 ---SSVDVWELKDPHGNIECVQTLDMMPENF--SDTRWAADIHITPDGRHLYACDRT----ASLITVFSVS 261 (343)
T ss_dssp ---TEEEEEESSCTTSCCEEEEEEECSCTTC--CSCCCEEEEEECTTSSEEEEEETT----TTEEEEEEEC
T ss_pred ---CEEEEEEecCCCCcEEEEeeccccCccc--cccCCccceEECCCCCEEEEEecC----CCEEEEEEEc
Confidence 257788874 3444332 2222110 001111223333444567765532 3467777775
No 102
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.06 E-value=1.1 Score=42.75 Aligned_cols=166 Identities=11% Similarity=0.037 Sum_probs=84.0
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcccceEEEE----CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCC
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r 193 (507)
.+.++|+.++.....-. + .. ....++.+ ++.+++.|+.+ ..+..+|+.+.+....-. + ...
T Consensus 177 ~v~lwd~~~~~~~~~~~-~--h~--~~v~~~~~~~~~~g~~l~sgs~D------g~v~~wd~~~~~~~~~~~-~---h~~ 241 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFH-G--HG--ADVLCLDLAPSETGNTFVSGGCD------KKAMVWDMRSGQCVQAFE-T---HES 241 (354)
T ss_dssp EEEEEETTTCCEEEEEE-C--CS--SCEEEEEECCCSSCCEEEEEETT------SCEEEEETTTCCEEEEEC-C---CSS
T ss_pred cEEEEeCCCCeEEEEEc-C--CC--CCeEEEEEEeCCCCCEEEEEeCC------CeEEEEECCCCcEEEEec-C---CCC
Confidence 58889998876543221 1 11 11112222 24677777754 358999998877644321 1 111
Q ss_pred CCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceE
Q 010571 194 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 194 ~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~ 271 (507)
.-.+++...++.+++.|+.+ ..+.+||+.+..-..... .........++.+ ++.+++.|+.++ .+
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~---~~~~~~~~~~~~~s~~g~~l~~g~~d~-----~i 308 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYS---KESIIFGASSVDFSLSGRLLFAGYNDY-----TI 308 (354)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEEC---CTTCCSCEEEEEECTTSSEEEEEETTS-----CE
T ss_pred CeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEc---CCCcccceeEEEEeCCCCEEEEEECCC-----cE
Confidence 11223333455577777765 358889988764333211 1111222333444 466777776443 47
Q ss_pred EEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCC
Q 010571 272 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 319 (507)
Q Consensus 272 ~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~ 319 (507)
.+||+.+..- +..+.+ +......+.+..+..+++.|+.++
T Consensus 309 ~vwd~~~~~~--~~~l~~------h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 309 NVWDVLKGSR--VSILFG------HENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp EEEETTTCSE--EEEECC------CSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEECCCCce--EEEEEC------CCCcEEEEEECCCCCEEEEEcCCC
Confidence 8888866532 222211 112233334444445666677653
No 103
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.03 E-value=0.82 Score=48.09 Aligned_cols=156 Identities=8% Similarity=0.013 Sum_probs=78.1
Q ss_pred cCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC-cEEeeeecCCC-CCCC
Q 010571 167 LNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN-EWSQPEIKGDL-VTGR 244 (507)
Q Consensus 167 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~-~W~~~~~~~~~-p~~r 244 (507)
...++++|+.+++-..+... .........++...++..++++..+.......++++|+.++ ....+...... ....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG--EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC--SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccC--CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 35699999988876554321 11111112233345555555554443333457999999988 66654321110 0000
Q ss_pred cceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcC
Q 010571 245 AGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYN 322 (507)
Q Consensus 245 ~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~ 322 (507)
.......- ++++++.+..+ ....+|.++........+..-. ..........+++..|++.+..++...
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~---g~~~l~~~~~~~~~~~~l~~~~-------~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRD---GWNHLYLYDTTGRLIRQVTKGE-------WEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTT---SSCEEEEEETTSCEEEECCCSS-------SCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred cCCceeecCCCCEEEEEEccC---CccEEEEEECCCCEEEecCCCC-------eEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 11112223 56665555432 2457888887777666653211 011111223344456666555443334
Q ss_pred CeEEEEECCCCC
Q 010571 323 NEVFVMRLKPRD 334 (507)
Q Consensus 323 ~~v~~~~~~~~~ 334 (507)
..+|.+|+.+..
T Consensus 382 ~~l~~~d~~~~~ 393 (706)
T 2z3z_A 382 RHFYCIDIKGGK 393 (706)
T ss_dssp BEEEEEETTCCC
T ss_pred EEEEEEEcCCCC
Confidence 578888876543
No 104
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.98 E-value=0.039 Score=60.87 Aligned_cols=17 Identities=12% Similarity=0.429 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHhHHHHH
Q 010571 466 TIENEVQILRQQKSAFE 482 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~ 482 (507)
.|++|.+.|++|+..++
T Consensus 1027 ~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1027 ELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555556665555554
No 105
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.97 E-value=0.51 Score=45.06 Aligned_cols=137 Identities=11% Similarity=0.082 Sum_probs=61.1
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccc-cceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCc-eeEeeeccccccCcc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRY-KHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLA-WSNLRLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~-W~~~~~~~~~~~~~~ 79 (507)
....+||+....|..+.. +..... -.+++.. ++.+++.|+.+ ..+.+||+.++. |........
T Consensus 33 ~~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~~~~------ 98 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHART---FSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWKQTLVLLR------ 98 (377)
T ss_dssp SCBCEEEEETTEEEECCC---BCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCCCEEECCC------
T ss_pred CEEEEEEccCCceEEEEE---EecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCceeeeeEecc------
Confidence 345677877777766542 221111 1222222 45666777643 458889988876 544443221
Q ss_pred ccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCc-EEEeecCCCCCC-CcccceEEEE--CCE
Q 010571 80 EDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPV-ARGGHSVTLV--GSR 153 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~g~~p~-~r~~~~~~~~--~~~ 153 (507)
.......+.+ ++++++.|+.+. .+.+||+.+.. |.... .+.. ......++.+ ++.
T Consensus 99 ----------~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 99 ----------LNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSK---HLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp ----------CSSCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCE---EECSSCCSCEEEEEECTTSS
T ss_pred ----------cCCceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeee---EeecccCCCeEEEEEcCCCC
Confidence 1111222222 456666666432 37788877664 22221 1111 1111222233 456
Q ss_pred EEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 154 LIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 154 l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
+++.|+.+ ..+.+||+.+.
T Consensus 160 ~l~~~~~d------~~i~iwd~~~~ 178 (377)
T 3dwl_C 160 LLAAGCAD------RKAYVLSAYVR 178 (377)
T ss_dssp EEEEEESS------SCEEEEEECCS
T ss_pred EEEEEeCC------CEEEEEEEEec
Confidence 67777654 35888887543
No 106
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.97 E-value=0.52 Score=50.47 Aligned_cols=189 Identities=12% Similarity=0.051 Sum_probs=94.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
++.++++|+. ...+.+||..++.....-.... .........-++..++.|+.+
T Consensus 24 ~~~~la~~~~-----~g~v~iwd~~~~~~~~~~~~~~----------------~~v~~~~~s~~~~~l~~~~~d------ 76 (814)
T 3mkq_A 24 TEPWVLTTLY-----SGRVEIWNYETQVEVRSIQVTE----------------TPVRAGKFIARKNWIIVGSDD------ 76 (814)
T ss_dssp SSSEEEEEET-----TSEEEEEETTTTEEEEEEECCS----------------SCEEEEEEEGGGTEEEEEETT------
T ss_pred CCCEEEEEeC-----CCEEEEEECCCCceEEEEecCC----------------CcEEEEEEeCCCCEEEEEeCC------
Confidence 4555666653 2468899998876543322110 111111122255666666642
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCC-cEEEeecCCCCCCCC
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQTPPAPR 193 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~-~W~~~~~~g~~p~~r 193 (507)
..+.+||..++....... ..+ ....++.+ ++..++.|+.+ ..+.+||+.+. ....... +. ..
T Consensus 77 g~i~vw~~~~~~~~~~~~--~~~---~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~-~~---~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFE--AHP---DYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFE-GH---EH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEE--CCS---SCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEE-CC---SS
T ss_pred CeEEEEECCCCcEEEEEe--cCC---CCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEc-CC---CC
Confidence 358899998887644321 111 11122222 34455566542 35888998765 3322221 11 11
Q ss_pred CCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEE-E--CCEEEEEeccCCCCCcc
Q 010571 194 YDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT-I--DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 194 ~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~--~~~l~v~GG~~~~~~~~ 269 (507)
.-.+++... ++.+++.|+.+ ..+.+||+.+..-..... .. .......++. . ++.++++|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~~~l~~~~~dg----- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLT-TG--QERGVNYVDYYPLPDKPYMITASDDL----- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETT-----SEEEEEETTCSSCSEEEE-CC--CTTCCCEEEECCSTTCCEEEEECTTS-----
T ss_pred cEEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeEEe-cC--CCCCEEEEEEEECCCCCEEEEEeCCC-----
Confidence 122333344 45577777755 468889986543222111 11 1111112222 2 566777777443
Q ss_pred eEEEEEcCcCe
Q 010571 270 ETIVLNMTKLA 280 (507)
Q Consensus 270 d~~~~d~~~~~ 280 (507)
.+.+||+.+..
T Consensus 209 ~i~~~d~~~~~ 219 (814)
T 3mkq_A 209 TIKIWDYQTKS 219 (814)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCCCc
Confidence 57888887765
No 107
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.95 E-value=0.61 Score=45.51 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=36.4
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++..++.|+.+ ..+.+||..++.....-. + ......++.+ ++.+++.|+.+ +.+.++|+.+
T Consensus 203 ~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~-~----h~~~v~~~~~~~~g~~l~s~s~D------~~v~vwd~~~ 265 (410)
T 1vyh_C 203 NGDHIVSASRD------KTIKMWEVQTGYCVKTFT-G----HREWVRMVRPNQDGTLIASCSND------QTVRVWVVAT 265 (410)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEEEE-C----CSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEe-C----CCccEEEEEECCCCCEEEEEcCC------CeEEEEECCC
Confidence 45566666643 358899998876433221 1 1111122222 45667777654 3588888877
Q ss_pred CcEEE
Q 010571 178 MTWDA 182 (507)
Q Consensus 178 ~~W~~ 182 (507)
.....
T Consensus 266 ~~~~~ 270 (410)
T 1vyh_C 266 KECKA 270 (410)
T ss_dssp CCEEE
T ss_pred Cceee
Confidence 66543
No 108
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.95 E-value=0.56 Score=44.45 Aligned_cols=139 Identities=9% Similarity=0.048 Sum_probs=69.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|..++.+..+..... .......+.+ ++.+++.|+.+.
T Consensus 72 ~g~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~----------------h~~~v~~v~~sp~~~~l~s~s~D~--- 127 (345)
T 3fm0_A 72 CGNYLASASFD-----ATTCIWKKNQDDFECVTTLEG----------------HENEVKSVAWAPSGNLLATCSRDK--- 127 (345)
T ss_dssp TSSEEEEEETT-----SCEEEEEECCC-EEEEEEECC----------------CSSCEEEEEECTTSSEEEEEETTS---
T ss_pred CCCEEEEEECC-----CcEEEEEccCCCeEEEEEccC----------------CCCCceEEEEeCCCCEEEEEECCC---
Confidence 45566666643 347778887776655444321 1111223333 566777776532
Q ss_pred CcceEEEEECCCCc-EEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 115 DSMIVRFIDLETNL-CGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~~d~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
.+.++|+.+.. +..+.. +.........+.+ ++.+++.|+.+ ..+.+||..+..|........ .
T Consensus 128 ---~v~iwd~~~~~~~~~~~~---~~~h~~~v~~~~~~p~~~~l~s~s~d------~~i~~w~~~~~~~~~~~~~~~--h 193 (345)
T 3fm0_A 128 ---SVWVWEVDEEDEYECVSV---LNSHTQDVKHVVWHPSQELLASASYD------DTVKLYREEEDDWVCCATLEG--H 193 (345)
T ss_dssp ---CEEEEEECTTSCEEEEEE---ECCCCSCEEEEEECSSSSCEEEEETT------SCEEEEEEETTEEEEEEEECC--C
T ss_pred ---eEEEEECCCCCCeEEEEE---ecCcCCCeEEEEECCCCCEEEEEeCC------CcEEEEEecCCCEEEEEEecC--C
Confidence 37778876542 332221 1111111122222 34666667654 258888988888765432111 1
Q ss_pred CCCCceEEEEcCcEEEEEeCCC
Q 010571 192 PRYDHSAALHANRYLIVFGGCS 213 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~i~GG~~ 213 (507)
...-.+++...++.+++.|+.+
T Consensus 194 ~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 194 ESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEeCC
Confidence 1111233334455567777755
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.94 E-value=1.1 Score=42.06 Aligned_cols=149 Identities=13% Similarity=0.097 Sum_probs=72.4
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEEcCC-CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 151 GSRLIIFGGEDRSRKLLNDVHFLDLET-MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 151 ~~~l~~~GG~~~~~~~~~~~~~~d~~t-~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++..++.|+.+ ..+.+||+.+ ..-...-. + ....-.+++...++.+++.|+.+ ..+.+||+.+.
T Consensus 186 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~ 250 (369)
T 3zwl_B 186 KGKYIIAGHKD------GKISKYDVSNNYEYVDSID-L---HEKSISDMQFSPDLTYFITSSRD-----TNSFLVDVSTL 250 (369)
T ss_dssp GGCEEEEEETT------SEEEEEETTTTTEEEEEEE-C---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTC
T ss_pred CCCEEEEEcCC------CEEEEEECCCCcEeEEEEe-c---CCCceeEEEECCCCCEEEEecCC-----ceEEEEECCCC
Confidence 34566666543 3699999987 33322211 1 11112233444455566777654 46899999887
Q ss_pred cEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCC---------cceEEEEEcCcCeeEEeccCCCCCCCCCCCC
Q 010571 230 EWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNG---------CQETIVLNMTKLAWSILTSVKGRNPLASEGL 298 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~---------~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~ 298 (507)
.....-. .. .....+.+ ++..+++|+.++... ...+.+||..+..-.. .+.. +..
T Consensus 251 ~~~~~~~-----~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~------~~~ 316 (369)
T 3zwl_B 251 QVLKKYE-----TD-CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG--RVQG------HFG 316 (369)
T ss_dssp CEEEEEE-----CS-SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEE--EEEC------CSS
T ss_pred ceeeeec-----CC-CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh--heec------ccC
Confidence 6544321 11 11122223 456666665443211 1146778876654222 1111 111
Q ss_pred ceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 299 SVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 299 ~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
....+.+..+..+++.||.+ ..+.++++..
T Consensus 317 ~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred cEEEEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 23333444344566667754 4577777653
No 110
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.88 E-value=0.25 Score=46.66 Aligned_cols=106 Identities=19% Similarity=0.224 Sum_probs=53.5
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCcccceEEE-----ECCEEEEEcCcCCCCCccCcEEE
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTL-----VGSRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~-----~~~~l~~~GG~~~~~~~~~~~~~ 172 (507)
++.+++.|+.+. .+.+||+.+.. ...+... .....+...+++. -++.+++.|+.+ ..+.+
T Consensus 128 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------~~i~i 194 (357)
T 3i2n_A 128 GAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPV-QGENKRDCWTVAFGNAYNQEERVVCAGYDN------GDIKL 194 (357)
T ss_dssp CCCEEEEEETTS------CEEEECTTSCSSCSEEECCC-TTSCCCCEEEEEEECCCC-CCCEEEEEETT------SEEEE
T ss_pred CccEEEEEeCCC------eEEEEeCCCCCCcceecccc-CCCCCCceEEEEEEeccCCCCCEEEEEccC------CeEEE
Confidence 455666666432 38889988764 3333210 0000111222221 355666766643 36999
Q ss_pred EEcCCCcEEEeecCCCCCCCCCCceEEEEc---CcEEEEEeCCCCCcCCCcEEEEECCC
Q 010571 173 LDLETMTWDAVEVTQTPPAPRYDHSAALHA---NRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 173 ~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~---~~~l~i~GG~~~~~~~~~i~~~d~~~ 228 (507)
||+.+..-..... . ...-.++.... ++..++.|+.+ ..+.+||+.+
T Consensus 195 ~d~~~~~~~~~~~---~--~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 243 (357)
T 3i2n_A 195 FDLRNMALRWETN---I--KNGVCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRT 243 (357)
T ss_dssp EETTTTEEEEEEE---C--SSCEEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEE
T ss_pred EECccCceeeecC---C--CCceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcC
Confidence 9998876533321 1 11122333333 44566677654 3577777654
No 111
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.88 E-value=1.3 Score=42.49 Aligned_cols=190 Identities=10% Similarity=0.010 Sum_probs=91.4
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCC-----------CCcccceEEEECCEEEEEcCcCCCCCccC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVP-----------VARGGHSVTLVGSRLIIFGGEDRSRKLLN 168 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p-----------~~r~~~~~~~~~~~l~~~GG~~~~~~~~~ 168 (507)
++..++.|+.+ ..+.+||..++...........+ ......+++...+..++.|+.+ .
T Consensus 160 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g 227 (425)
T 1r5m_A 160 DGTHIISMDVE------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------G 227 (425)
T ss_dssp TSSEEEEEETT------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG------G
T ss_pred CCCEEEEEecC------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC------C
Confidence 45555566542 23888998887654433111111 0000223333344446666643 3
Q ss_pred cEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceE
Q 010571 169 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHA 248 (507)
Q Consensus 169 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~ 248 (507)
.+..||+.+..-..... .....-.+++...++.+++.|+.+ ..+.+||+.+......- . .....-.+
T Consensus 228 ~i~~~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~--~--~~~~~i~~ 294 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLI----GHHGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCF--Y--GHSQSIVS 294 (425)
T ss_dssp CEEEEETTCSSCSEEEC----CCSSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEE--C--CCSSCEEE
T ss_pred eEEEEEcCCCceeeeec----cCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEe--c--CCCccEEE
Confidence 69999998764322211 111112334444555566677654 35888887765422211 0 01111223
Q ss_pred EEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEE
Q 010571 249 GITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVM 328 (507)
Q Consensus 249 ~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~ 328 (507)
++...+.+++.|+.++ .+.+||+.+..-....... ......+.+..+..++++|+.+ ..+.+|
T Consensus 295 ~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~~~d----g~i~i~ 357 (425)
T 1r5m_A 295 ASWVGDDKVISCSMDG-----SVRLWSLKQNTLLALSIVD--------GVPIFAGRISQDGQKYAVAFMD----GQVNVY 357 (425)
T ss_dssp EEEETTTEEEEEETTS-----EEEEEETTTTEEEEEEECT--------TCCEEEEEECTTSSEEEEEETT----SCEEEE
T ss_pred EEECCCCEEEEEeCCC-----cEEEEECCCCcEeEecccC--------CccEEEEEEcCCCCEEEEEECC----CeEEEE
Confidence 3333333666666432 5888998776533221111 1123333444344466666654 457777
Q ss_pred ECC
Q 010571 329 RLK 331 (507)
Q Consensus 329 ~~~ 331 (507)
|+.
T Consensus 358 ~~~ 360 (425)
T 1r5m_A 358 DLK 360 (425)
T ss_dssp ECH
T ss_pred ECC
Confidence 774
No 112
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.86 E-value=0.29 Score=45.47 Aligned_cols=212 Identities=8% Similarity=-0.059 Sum_probs=101.9
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
..++||+.+..-..+.. + .+. .+++.. ++.+|+.. .+.+++||+.++.+..+.....
T Consensus 36 ~i~~~d~~~~~~~~~~~----~-~~~-~~i~~~~dG~l~v~~-------~~~l~~~d~~~g~~~~~~~~~~--------- 93 (297)
T 3g4e_A 36 KVCRWDSFTKQVQRVTM----D-APV-SSVALRQSGGYVATI-------GTKFCALNWKEQSAVVLATVDN--------- 93 (297)
T ss_dssp EEEEEETTTCCEEEEEC----S-SCE-EEEEEBTTSSEEEEE-------TTEEEEEETTTTEEEEEEECCT---------
T ss_pred EEEEEECCCCcEEEEeC----C-Cce-EEEEECCCCCEEEEE-------CCeEEEEECCCCcEEEEEecCC---------
Confidence 35677777666554432 1 111 222322 45555542 2469999999998877664321
Q ss_pred CccCCCCCccceeeEEECCEEEEEcccCCC-----CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEE
Q 010571 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKK-----SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLI 155 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~ 155 (507)
..+..+....++.-+++||+..-.... ......++.+|+. +....+.. ....+ ..++.. +..+|
T Consensus 94 ---~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~--~~~~p---ngi~~spdg~~ly 164 (297)
T 3g4e_A 94 ---DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD--QVDIS---NGLDWSLDHKIFY 164 (297)
T ss_dssp ---TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE--EESBE---EEEEECTTSCEEE
T ss_pred ---CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee--ccccc---cceEEcCCCCEEE
Confidence 111122222233336777764211110 1124568889875 33333321 11111 122222 33677
Q ss_pred EEcCcCCCCCccCcEEEEEc--CCCcEEEeecCCCCCC-CCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEE
Q 010571 156 IFGGEDRSRKLLNDVHFLDL--ETMTWDAVEVTQTPPA-PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 156 ~~GG~~~~~~~~~~~~~~d~--~t~~W~~~~~~g~~p~-~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
+.... .+.++.||+ .++...........+. ...-..++.-.++.||+....+ +.|.+||+.++...
T Consensus 165 v~~~~------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 165 YIDSL------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEGG------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCEE
T ss_pred EecCC------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceEE
Confidence 76532 346888876 4555432211001111 1111234554566788764322 45999999877654
Q ss_pred eeeecCCCCCCCcceEEEEEC----CEEEEEecc
Q 010571 233 QPEIKGDLVTGRAGHAGITID----ENWYIVGGG 262 (507)
Q Consensus 233 ~~~~~~~~p~~r~~~~~~~~~----~~l~v~GG~ 262 (507)
..- ..|. ...+++.++ +.|||....
T Consensus 234 ~~i---~~p~--~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 234 QTV---KLPV--DKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEE---ECSS--SBEEEEEEESGGGCEEEEEEBC
T ss_pred EEE---ECCC--CCceEEEEeCCCCCEEEEEcCC
Confidence 421 1222 223444453 367777553
No 113
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.84 E-value=1.1 Score=41.15 Aligned_cols=220 Identities=11% Similarity=0.044 Sum_probs=111.3
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
...+.||+... ...+.. +. ..-++++.. ++.||+.... ...+.+||+.+++...+.....
T Consensus 50 ~~i~~~~~~~~-~~~~~~----~~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~-------- 110 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMH----PS-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFE-------- 110 (296)
T ss_dssp TEEEEEETTSC-EEEEES----SC-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEET--------
T ss_pred CEEEEEECCCC-eEEEEC----CC-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccC--------
Confidence 34677888877 555542 11 112333333 5667765431 2468999998888766543211
Q ss_pred CCccCCCCCccceeeEEECCEEEEE----cccCC-------CCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE
Q 010571 82 SGLLEVLPPMSDHCMVKWGTKLLIL----GGHYK-------KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV 150 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~ 150 (507)
..+..+....++.-+++||+. |.... .......++.||+. ++...+.. ....+ ..++.-
T Consensus 111 ----~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~~---~gi~~s 180 (296)
T 3e5z_A 111 ----GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR--DRVKP---NGLAFL 180 (296)
T ss_dssp ----TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC--CCSSE---EEEEEC
T ss_pred ----CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec--CCCCC---ccEEEC
Confidence 011112222333336788886 43210 01113469999987 66555431 11111 122222
Q ss_pred -CCEEEEEcCcCCCCCccCcEEEEEcC-CCcE-EEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECC
Q 010571 151 -GSRLIIFGGEDRSRKLLNDVHFLDLE-TMTW-DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 151 -~~~l~~~GG~~~~~~~~~~~~~~d~~-t~~W-~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~ 227 (507)
++++++.+.. .+.+++||+. +++. ...... ... ...-.+++...++.+|+..+ +.|.+||+.
T Consensus 181 ~dg~~lv~~~~------~~~i~~~~~~~~g~~~~~~~~~-~~~-~~~p~~i~~d~~G~l~v~~~-------~~v~~~~~~ 245 (296)
T 3e5z_A 181 PSGNLLVSDTG------DNATHRYCLNARGETEYQGVHF-TVE-PGKTDGLRVDAGGLIWASAG-------DGVHVLTPD 245 (296)
T ss_dssp TTSCEEEEETT------TTEEEEEEECSSSCEEEEEEEE-CCS-SSCCCSEEEBTTSCEEEEET-------TEEEEECTT
T ss_pred CCCCEEEEeCC------CCeEEEEEECCCCcCcCCCeEe-eCC-CCCCCeEEECCCCCEEEEcC-------CeEEEECCC
Confidence 3455544322 3469999986 5665 222211 111 11112455556777888762 569999998
Q ss_pred CCcEEeeeecCCCCCCCcceEEEEE-C---CEEEEEeccCCCCCcceEEEEEcCcCe
Q 010571 228 TNEWSQPEIKGDLVTGRAGHAGITI-D---ENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 228 ~~~W~~~~~~~~~p~~r~~~~~~~~-~---~~l~v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
......+.. |.. ...+.+ + +.||+... ..++.|++.+..
T Consensus 246 g~~~~~~~~----~~~---~~~~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~ 288 (296)
T 3e5z_A 246 GDELGRVLT----PQT---TSNLCFGGPEGRTLYMTVS-------TEFWSIETNVRG 288 (296)
T ss_dssp SCEEEEEEC----SSC---CCEEEEESTTSCEEEEEET-------TEEEEEECSCCB
T ss_pred CCEEEEEEC----CCC---ceeEEEECCCCCEEEEEcC-------CeEEEEEccccc
Confidence 555544432 211 223333 2 24666532 258888877664
No 114
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=95.83 E-value=0.18 Score=42.76 Aligned_cols=22 Identities=14% Similarity=0.317 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~~ 487 (507)
.++....++-+++.-++.++++
T Consensus 134 D~e~kln~aiEr~alLE~El~E 155 (189)
T 2v71_A 134 DFEQRLNQAIERNAFLESELDE 155 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444445555443
No 115
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.82 E-value=0.039 Score=57.35 Aligned_cols=7 Identities=14% Similarity=0.596 Sum_probs=2.7
Q ss_pred EEEECCC
Q 010571 56 QVFDLRS 62 (507)
Q Consensus 56 ~~~d~~t 62 (507)
..+++..
T Consensus 78 ~~L~L~~ 84 (597)
T 3oja_B 78 ELLNLND 84 (597)
T ss_dssp SEEECTT
T ss_pred cEEECCC
Confidence 3344333
No 116
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.79 E-value=0.57 Score=48.86 Aligned_cols=151 Identities=13% Similarity=0.001 Sum_probs=81.1
Q ss_pred cceEEEEECC-CC---cEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCC-C
Q 010571 116 SMIVRFIDLE-TN---LCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT-P 189 (507)
Q Consensus 116 ~~~~~~~d~~-t~---~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~-~ 189 (507)
...++++|+. ++ ....+.. .. .......+.. ++++|+.+..++ ...++.+|+.++++..+..... .
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~---~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLG---GP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEE---ET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBS
T ss_pred CcEEEEEEECCCCcccccEEeCC---CC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccc
Confidence 4579999998 57 3444431 00 1111122222 566776665432 2369999998888887753211 0
Q ss_pred CCCCC---CceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEE-EEECCEEEEEeccCCC
Q 010571 190 PAPRY---DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAG-ITIDENWYIVGGGDNN 265 (507)
Q Consensus 190 p~~r~---~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~ 265 (507)
-.+.. ....+...++.+++.+.. ....+|.+|+.++....+.. +. ...... ..-++.+++..+..
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~~----~~-~~~~~~~s~~~~~~~~~~~~~-- 356 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAAG----PW-TEWAATLTVSGTRAVGVAASP-- 356 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECCS----SC-CEEEEEEEEETTEEEEEEEET--
T ss_pred cCccccccCceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEecC----CC-CeEEEEEecCCCEEEEEEcCC--
Confidence 00100 123333445656665543 24678999998887766531 11 111122 22355666554422
Q ss_pred CCcceEEEEEcCcCeeEEec
Q 010571 266 NGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 266 ~~~~d~~~~d~~~~~W~~~~ 285 (507)
.....+|.+|+.+.....+.
T Consensus 357 ~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 357 RTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp TEEEEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCceEEee
Confidence 12447889998888777763
No 117
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.75 E-value=1.1 Score=40.37 Aligned_cols=231 Identities=13% Similarity=0.061 Sum_probs=113.5
Q ss_pred ceEEEE-CCEEEE-EcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEc
Q 010571 31 HAAAVF-DQKLYI-VGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILG 107 (507)
Q Consensus 31 ~~~~~~-~~~lyv-~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~G 107 (507)
++++.. ++.||+ .... ...+.+||+.+.......... ...-++++.. ++.||+..
T Consensus 27 ~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~-----------------~~~p~~i~~~~~g~l~v~~ 84 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNG-----------------LYQPQGLAVDGAGTVYVTD 84 (270)
T ss_dssp EEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCCS-----------------CCSCCCEEECTTCCEEEEE
T ss_pred cceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeCC-----------------cCCcceeEECCCCCEEEEc
Confidence 344443 467888 4331 246888988776544332211 0111233333 56788875
Q ss_pred ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeec
Q 010571 108 GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEV 185 (507)
Q Consensus 108 G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~ 185 (507)
. ...+.+||+.+........ . .........+ ++.+|+.... .+.+.+|+..+........
T Consensus 85 ~-------~~~i~~~d~~~~~~~~~~~----~-~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~ 146 (270)
T 1rwi_B 85 F-------NNRVVTLAAGSNNQTVLPF----D-GLNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPF 146 (270)
T ss_dssp T-------TTEEEEECTTCSCCEECCC----C-SCSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCC
T ss_pred C-------CCEEEEEeCCCceEeeeec----C-CcCCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeecc
Confidence 4 1248999988776544321 1 1111222333 4578876432 3468888876655443321
Q ss_pred CCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccC
Q 010571 186 TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGD 263 (507)
Q Consensus 186 ~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 263 (507)
. .. ..-..++...++.+|+..... +.+.+||+.+..-..... ... .....+.+ ++.+|+....+
T Consensus 147 ~-~~---~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~-~~~----~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 147 T-GL---NDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQVVLPF-TDI----TAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp C-SC---CSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEEECCC-SSC----CSEEEEEECTTCCEEEEETTT
T ss_pred c-cC---CCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceEeecc-cCC----CCceEEEECCCCCEEEEECCC
Confidence 1 11 112345555556688765432 468999987765443211 111 22233444 34788765422
Q ss_pred CCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 264 NNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 264 ~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
+.+.+||+....-..+... . ......+.++.+..||+.... .+.|.+|++..
T Consensus 213 -----~~v~~~~~~~~~~~~~~~~-~-------~~~p~~i~~~~~g~l~v~~~~----~~~v~~~~~~~ 264 (270)
T 1rwi_B 213 -----NQVVKLLAGSTTSTVLPFT-G-------LNTPLAVAVDSDRTVYVADRG----NDRVVKLTSLE 264 (270)
T ss_dssp -----SCEEEECTTCSCCEECCCC-S-------CSCEEEEEECTTCCEEEEEGG----GTEEEEECCCG
T ss_pred -----CcEEEEcCCCCcceeeccC-C-------CCCceeEEECCCCCEEEEECC----CCEEEEEcCCC
Confidence 2478888876543322110 0 112333444444457776543 35677777643
No 118
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.75 E-value=1.3 Score=41.17 Aligned_cols=147 Identities=19% Similarity=0.123 Sum_probs=73.4
Q ss_pred CceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEEC-CEEEEEcccCCCCCCcceEEEEECCCCcEEE
Q 010571 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWG-TKLLILGGHYKKSSDSMIVRFIDLETNLCGV 131 (507)
Q Consensus 53 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~ 131 (507)
..+.++|+.++.....-..+.. ..+..+.+..-+ +.+|+.++. ...+.+||+.+++-..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~--------------~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADA--------------GPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLG 70 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTC--------------TTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCC--------------CCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEe
Confidence 5689999988765433222110 001112222223 467776642 2359999999887543
Q ss_pred eecCCCCCC--CcccceEEEE-C-CEEEEEcCc---CCCCC--ccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEc
Q 010571 132 METSGKVPV--ARGGHSVTLV-G-SRLIIFGGE---DRSRK--LLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA 202 (507)
Q Consensus 132 ~~~~g~~p~--~r~~~~~~~~-~-~~l~~~GG~---~~~~~--~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~ 202 (507)
....+. +. ...-..++.- + +.+|+.... ..... ..+.+.+||+.+.+....-..+. ..+.++...
T Consensus 71 ~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-----~~~~~~~s~ 144 (337)
T 1pby_B 71 RIDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-----QITMLAWAR 144 (337)
T ss_dssp EEECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-----SCCCEEECT
T ss_pred eEEcCC-cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-----CcceeEECC
Confidence 221111 00 0011222222 3 367766421 00000 13579999998877654432221 123344444
Q ss_pred CcE-EEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 203 NRY-LIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 203 ~~~-l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
++. +|+.+ +.++++|+.++.-..
T Consensus 145 dg~~l~~~~--------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 145 DGSKLYGLG--------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp TSSCEEEES--------SSEEEEETTTTEEEE
T ss_pred CCCEEEEeC--------CeEEEEECCCCcEee
Confidence 443 55541 569999998876543
No 119
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.74 E-value=1.6 Score=42.22 Aligned_cols=191 Identities=11% Similarity=0.046 Sum_probs=95.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++.+++.|+.+. .+.+||+.++.-.... ........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQD------MQLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETTS------CEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEECCC------CEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCC
Confidence 667777776432 4888998877544331 111112222333 44566666643 3589999876
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEE------
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT------ 251 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~------ 251 (507)
.+-...-. + ....-.+++...++.+++.|+.+ ..+.+||+.+..-...-.....+.. .-.+++.
T Consensus 171 ~~~~~~~~-~---h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 171 GSNPRTLI-G---HRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHD-GVNSIALFVGTDR 240 (420)
T ss_dssp CCCCEEEE-C---CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTC-CEEEEEEEECCCS
T ss_pred CcCceEEc-C---CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCC-CccEEEEecCCcc
Confidence 54322111 1 11112234444555566777754 3588899887654332111100100 0011111
Q ss_pred ----------------ECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceE-EEEE
Q 010571 252 ----------------IDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHH-LVAF 314 (507)
Q Consensus 252 ----------------~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-l~v~ 314 (507)
-++.+++.|+.++ .+.+||+.+..-... +.. .+......+....+.. +++.
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~-----~~~~~v~~~~~~~~~~~~l~~ 308 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQ--LPS-----KFTCSCNSLTVDGNNANYIYA 308 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEE--ECC-----TTSSCEEEEEECSSCTTEEEE
T ss_pred eeeecccCcccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEE--ccc-----ccCCCceeEEEeCCCCCEEEE
Confidence 1456777776543 378899877642221 111 0112233333433333 6666
Q ss_pred cccCCCcCCeEEEEECCCC
Q 010571 315 GGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 315 GG~~~~~~~~v~~~~~~~~ 333 (507)
|+.+ ..+.++|+...
T Consensus 309 g~~d----g~i~vwd~~~~ 323 (420)
T 3vl1_A 309 GYEN----GMLAQWDLRSP 323 (420)
T ss_dssp EETT----SEEEEEETTCT
T ss_pred EeCC----CeEEEEEcCCC
Confidence 7754 46888888654
No 120
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.74 E-value=1.3 Score=41.37 Aligned_cols=183 Identities=12% Similarity=0.093 Sum_probs=93.8
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++..++.|+.. ..+.+||..++.-..... .. . ....++.+ ++..++.|+.+ ..+.+||+.+
T Consensus 133 dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~---~~-~-~~v~~~~~spdg~~lasg~~d------g~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHV------GKVNIFGVESGKKEYSLD---TR-G-KFILSIAYSPDGKYLASGAID------GIINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTT------SEEEEEETTTCSEEEEEE---CS-S-SCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCceeEEec---CC-C-ceEEEEEECCCCCEEEEEcCC------CeEEEEECCC
Confidence 56666666542 347888888775432211 01 1 11122223 45666777654 3589999988
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN 255 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 255 (507)
++-...-. +. ...-.+++...++.+++.|+.+ ..+.+||+.+...... +......-..+.+ ++.
T Consensus 196 ~~~~~~~~-~h---~~~v~~l~~spd~~~l~s~s~d-----g~i~iwd~~~~~~~~~-----~~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 196 GKLLHTLE-GH---AMPIRSLTFSPDSQLLVTASDD-----GYIKIYDVQHANLAGT-----LSGHASWVLNVAFCPDDT 261 (321)
T ss_dssp TEEEEEEC-CC---SSCCCEEEECTTSCEEEEECTT-----SCEEEEETTTCCEEEE-----ECCCSSCEEEEEECTTSS
T ss_pred CcEEEEEc-cc---CCceeEEEEcCCCCEEEEEcCC-----CeEEEEECCCcceeEE-----EcCCCCceEEEEECCCCC
Confidence 76433221 11 1112234444566677777765 3588999887655432 1111111223333 456
Q ss_pred EEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEEC
Q 010571 256 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 256 l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
.++.|+.++ .+.++|+.+..-.. .+... ......+.+..+...++.||.++ .+.++|.
T Consensus 262 ~l~s~s~D~-----~v~iwd~~~~~~~~--~~~~h------~~~v~~v~~s~~g~~l~s~~~d~----~i~vwd~ 319 (321)
T 3ow8_A 262 HFVSSSSDK-----SVKVWDVGTRTCVH--TFFDH------QDQVWGVKYNGNGSKIVSVGDDQ----EIHIYDC 319 (321)
T ss_dssp EEEEEETTS-----CEEEEETTTTEEEE--EECCC------SSCEEEEEECTTSSEEEEEETTC----CEEEEEC
T ss_pred EEEEEeCCC-----cEEEEeCCCCEEEE--EEcCC------CCcEEEEEECCCCCEEEEEeCCC----eEEEEeC
Confidence 777777543 37788887764322 22111 11233344444444566677553 4555553
No 121
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.74 E-value=1.2 Score=40.67 Aligned_cols=233 Identities=9% Similarity=0.080 Sum_probs=116.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCC-ccceeeEEE--CCEEEEEcccCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPP-MSDHCMVKW--GTKLLILGGHYKKS 113 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~ 113 (507)
++.+|+.+.. ...+.+||+.......+..... .+.. ..-+.++.. ++.||+.+...
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~-------------~~~~~~~p~~i~~~~~~g~l~v~~~~~--- 98 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGK-------------RDSQLLYPNRVAVVRNSGDIIVTERSP--- 98 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSS-------------STTCBSSEEEEEEETTTTEEEEEECGG---
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccCC-------------CcccccCceEEEEEcCCCeEEEEcCCC---
Confidence 4678877542 2468899987544333332110 0001 112334432 68899886321
Q ss_pred CCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 114 SDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 114 ~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
...+.+||+....-..+.. +. ......+.+ ++.+|+.... .+.+.+||+.......+...+..
T Consensus 99 --~~~i~~~d~~g~~~~~~~~----~~-~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~-- 163 (286)
T 1q7f_A 99 --THQIQIYNQYGQFVRKFGA----TI-LQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKHL-- 163 (286)
T ss_dssp --GCEEEEECTTSCEEEEECT----TT-CSCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTTC--
T ss_pred --CCEEEEECCCCcEEEEecC----cc-CCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCcc--
Confidence 2358899955443333321 11 111122333 4578876532 34699999765444444321111
Q ss_pred CCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcc
Q 010571 192 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~ 269 (507)
..-.+++...++.+|+.+.. .+.|.+||+.......+...+.. .....+.+ ++++|+....++ .
T Consensus 164 -~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~----~~p~~i~~d~~G~l~v~~~~~~----~ 229 (286)
T 1q7f_A 164 -EFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGEILIADNHNN----F 229 (286)
T ss_dssp -SSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTS----CSEEEEEECTTCCEEEEECSSS----C
T ss_pred -CCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCcc----CCCcEEEECCCCCEEEEeCCCC----E
Confidence 11234445556778886543 25799999866544444221111 12233444 467888764332 1
Q ss_pred eEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 270 ETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 270 d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
.+.+||++...-..+..... ......+.+..+..||+... .+.+.+|++.
T Consensus 230 ~i~~~~~~g~~~~~~~~~~~-------~~~~~~i~~~~~g~l~vs~~-----~~~v~v~~~~ 279 (286)
T 1q7f_A 230 NLTIFTQDGQLISALESKVK-------HAQCFDVALMDDGSVVLASK-----DYRLYIYRYV 279 (286)
T ss_dssp EEEEECTTSCEEEEEEESSC-------CSCEEEEEEETTTEEEEEET-----TTEEEEEECS
T ss_pred EEEEECCCCCEEEEEcccCC-------CCcceeEEECCCCcEEEECC-----CCeEEEEEcc
Confidence 57889876554433322110 11122333444446777642 2567777764
No 122
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.73 E-value=1.5 Score=41.93 Aligned_cols=237 Identities=11% Similarity=0.084 Sum_probs=107.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-........ +......... ++.+++.|+...
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~--- 166 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEE----------------TVYSHHMSPVSTKHCLVAVGTRGP--- 166 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSS----------------CEEEEEECSSCSSCCEEEEEESSS---
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCC----------------ceeeeEeecCCCCCcEEEEEcCCC---
Confidence 44566666633 458899998876544332211 1111111111 344666665432
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--C-CEEEEEcCcCCCCCccCcEEEEEcCCCc--EEEeecCC--
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G-SRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQ-- 187 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~-~~l~~~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g-- 187 (507)
.+.+||+.+..-.... ........++.+ + .++++.|+.+ ..+.+||+.+.. ...+....
T Consensus 167 ---~v~~~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~ 232 (408)
T 4a11_B 167 ---KVQLCDLKSGSCSHIL-----QGHRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGK 232 (408)
T ss_dssp ---SEEEEESSSSCCCEEE-----CCCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTC
T ss_pred ---eEEEEeCCCcceeeee-----cCCCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccc
Confidence 4888998776432221 111111222333 2 2477777754 248888886543 22221000
Q ss_pred ---C-----CCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEE--ECCEEE
Q 010571 188 ---T-----PPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT--IDENWY 257 (507)
Q Consensus 188 ---~-----~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~l~ 257 (507)
. ......-.+++...++..++.|+.+ ..+.+||+.+..-.................... ..+..+
T Consensus 233 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T 4a11_B 233 KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD-----NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF 307 (408)
T ss_dssp SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE
T ss_pred cceeeccccccccCceeEEEEcCCCCEEEEecCC-----CeEEEEECCCCccceeccccccccccccceeEEecCCCceE
Confidence 0 0011111223333455566677654 358899988765332211111111111111111 123334
Q ss_pred EEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 258 IVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 258 v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
++++.+ ..+.+||..+..-.. .+... ......+.+..+..+++.||.+ ..+.++++...
T Consensus 308 ~~~~~~-----~~i~v~d~~~~~~~~--~~~~~------~~~v~~~~~s~~~~~l~s~~~d----g~i~iw~~~~~ 366 (408)
T 4a11_B 308 VFVPYG-----STIAVYTVYSGEQIT--MLKGH------YKTVDCCVFQSNFQELYSGSRD----CNILAWVPSLY 366 (408)
T ss_dssp EEEEET-----TEEEEEETTTCCEEE--EECCC------SSCEEEEEEETTTTEEEEEETT----SCEEEEEECC-
T ss_pred EEEecC-----CEEEEEECcCCccee--eeccC------CCeEEEEEEcCCCCEEEEECCC----CeEEEEeCCCC
Confidence 444322 257889987765332 22111 1122223333333456667654 35777777554
No 123
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.69 E-value=0.8 Score=43.69 Aligned_cols=184 Identities=11% Similarity=0.059 Sum_probs=91.0
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~ 176 (507)
+++.++.|+.+. .+.+||..++.-...- .. ......++.+ ++.+++.||.+ ..+.++|+.
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~---~~--h~~~v~~v~~s~~~~~~~~s~~~d------g~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSY---NA--HSSEVNCVAACPGKDTIFLSCGED------GRILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEE---CC--CSSCEEEEEECTTCSSCEEEEETT------SCEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEE---cC--CCCCEEEEEEccCCCceeeeeccC------CceEEEECC
Confidence 566777776432 3888999887644332 11 1111222233 23567777653 248888887
Q ss_pred CCcEEEeecCCCCCCCCCCceEEEE-c-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--
Q 010571 177 TMTWDAVEVTQTPPAPRYDHSAALH-A-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 252 (507)
Q Consensus 177 t~~W~~~~~~g~~p~~r~~~~~~~~-~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 252 (507)
+.+-.... ...........+.+ . ++.+++.|+.+ ..+.+||+.+..-... .........++.+
T Consensus 213 ~~~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~~~~~-----~~~~~~~v~~l~~sp 279 (357)
T 4g56_B 213 KPKPATRI---DFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPDSAQT-----SAVHSQNITGLAYSY 279 (357)
T ss_dssp SSSCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGGGCEE-----ECCCSSCEEEEEECS
T ss_pred CCceeeee---eeccccccccchhhhhcccceEEEeecc-----cceeEEECCCCcEeEE-----EeccceeEEEEEEcC
Confidence 76533221 11111111222333 2 34477777654 3588899876542111 1111112233333
Q ss_pred CC-EEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEc-CceEEEEEcccCCCcCCeEEEEEC
Q 010571 253 DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 253 ~~-~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
++ .+++.|+.++ .+.++|..+..-... +. +......+.+. .+..+++.||.+ ..|.++++
T Consensus 280 ~~~~~lasgs~D~-----~i~iwd~~~~~~~~~--~~-------H~~~V~~vafsP~d~~~l~s~s~D----g~v~iW~~ 341 (357)
T 4g56_B 280 HSSPFLASISEDC-----TVAVLDADFSEVFRD--LS-------HRDFVTGVAWSPLDHSKFTTVGWD----HKVLHHHL 341 (357)
T ss_dssp SSSCCEEEEETTS-----CEEEECTTSCEEEEE--CC-------CSSCEEEEEECSSSTTEEEEEETT----SCEEEEEC
T ss_pred CCCCEEEEEeCCC-----EEEEEECCCCcEeEE--CC-------CCCCEEEEEEeCCCCCEEEEEcCC----CeEEEEEC
Confidence 33 5666666443 378889887754332 11 11123333333 234567777765 35677776
Q ss_pred C
Q 010571 331 K 331 (507)
Q Consensus 331 ~ 331 (507)
.
T Consensus 342 ~ 342 (357)
T 4g56_B 342 P 342 (357)
T ss_dssp C
T ss_pred C
Confidence 4
No 124
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.68 E-value=1.1 Score=47.09 Aligned_cols=213 Identities=11% Similarity=-0.015 Sum_probs=102.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCC---
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKS--- 113 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--- 113 (507)
++..++|.-..++.....++++|+.++......... .......+-.-+++.++++......
T Consensus 131 DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~----------------~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 131 DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE----------------GGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS----------------CCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC----------------cccccceEEecCCCEEEEEEecCCCCCc
Confidence 455555443222223357999999998763110000 0111111122255555555443221
Q ss_pred ----CCcceEEEEECCCCcE--EEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeec
Q 010571 114 ----SDSMIVRFIDLETNLC--GVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEV 185 (507)
Q Consensus 114 ----~~~~~~~~~d~~t~~W--~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~ 185 (507)
.....++.+++.+..- ..+. ..+........+.+ +++.++++..+.. ..+.++.+|..+..|..+..
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVH---ERTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEE---CCCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEE
T ss_pred cccCCCCCEEEEEECCCCchhceEEE---ecCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeec
Confidence 1244699999888753 2222 11211111222222 3443333332221 24578888887788888763
Q ss_pred CCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc---EEeeeecCCCCCCCcceEEEEECCEEEEEecc
Q 010571 186 TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE---WSQPEIKGDLVTGRAGHAGITIDENWYIVGGG 262 (507)
Q Consensus 186 ~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~---W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 262 (507)
.. . .....+...++ +|+....+ .....|+.+|+.+.. |+.+.. ..+. ..-......++.+++....
T Consensus 270 ~~----~-~~~~~~~~~g~-l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~--~~~~-~~l~~~~~~~~~lv~~~~~ 338 (695)
T 2bkl_A 270 GV----G-AKYEVHAWKDR-FYVLTDEG--APRQRVFEVDPAKPARASWKEIVP--EDSS-ASLLSVSIVGGHLSLEYLK 338 (695)
T ss_dssp CS----S-CCEEEEEETTE-EEEEECTT--CTTCEEEEEBTTBCSGGGCEEEEC--CCSS-CEEEEEEEETTEEEEEEEE
T ss_pred CC----C-ceEEEEecCCc-EEEEECCC--CCCCEEEEEeCCCCCccCCeEEec--CCCC-CeEEEEEEECCEEEEEEEE
Confidence 21 1 11222223344 66554322 223579999987654 777632 1111 1112233347777776543
Q ss_pred CCCCCcceEEEEEcCcCeeEEe
Q 010571 263 DNNNGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 263 ~~~~~~~d~~~~d~~~~~W~~~ 284 (507)
+ ....++++++....-..+
T Consensus 339 d---g~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 339 D---ATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp T---TEEEEEEEETTCCEEEEC
T ss_pred C---CEEEEEEEeCCCCeeEEe
Confidence 3 245688888765544443
No 125
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=95.67 E-value=0.17 Score=38.51 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=28.7
Q ss_pred HHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhH----HHHHHHHHHHHHhHHHHHH
Q 010571 419 IDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS----QTIENEVQILRQQKSAFEQ 483 (507)
Q Consensus 419 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~----~~~e~e~~~~~~~~~~~~~ 483 (507)
+...+....+.+.++..++..++.++..+.+.+..+.+..+++... .+.+.+..-|.++++.+|+
T Consensus 32 ~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~RriqllEE 100 (101)
T 3u1c_A 32 KKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQLVEE 100 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3333333333333444444444444433344444443333333333 2445566666666665553
No 126
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.66 E-value=0.65 Score=49.10 Aligned_cols=223 Identities=11% Similarity=0.039 Sum_probs=108.7
Q ss_pred EECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCC
Q 010571 35 VFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKK 112 (507)
Q Consensus 35 ~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 112 (507)
.-|+.+|.+-- ..+.....+++.+...+.|+.+-..... . ...........+ +++.++++.....
T Consensus 81 ~dG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~lld~~~l-----------~-~~~~~~~~~~~~SPDg~~la~~~~~~G 147 (710)
T 2xdw_A 81 KKGKRYFYFYN-TGLQNQRVLYVQDSLEGEARVFLDPNIL-----------S-DDGTVALRGYAFSEDGEYFAYGLSASG 147 (710)
T ss_dssp EETTEEEEEEE-CSSCSSCEEEEESSTTSCCEEEECGGGG-----------C-TTSCEEEEEEEECTTSSEEEEEEEETT
T ss_pred EECCEEEEEEE-cCCceEEEEEEEcCCCCCcEEEECHHHh-----------c-cCCCEEEEEEEECCCCCEEEEEEcCCC
Confidence 34666665532 1223345678888777777665332210 0 001111222222 5555555433222
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCC----------CCccCcEEEEEcCCCcEE
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRS----------RKLLNDVHFLDLETMTWD 181 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~----------~~~~~~~~~~d~~t~~W~ 181 (507)
.. ...++++|+.++........ ... ....+.. +++.++++..+.. ......++.+++.+.+..
T Consensus 148 ~~-~~~i~v~d~~tg~~~~~~~~----~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~ 221 (710)
T 2xdw_A 148 SD-WVTIKFMKVDGAKELPDVLE----RVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE 221 (710)
T ss_dssp CS-CEEEEEEETTTTEEEEEEEE----EEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG
T ss_pred Cc-eEEEEEEECCCCCCCccccc----Ccc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc
Confidence 21 33699999999988764321 111 1123333 4443344333221 022456999999887632
Q ss_pred --EeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCC------C--cEEeeeecCCCCCCCcceEEEE
Q 010571 182 --AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT------N--EWSQPEIKGDLVTGRAGHAGIT 251 (507)
Q Consensus 182 --~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~------~--~W~~~~~~~~~p~~r~~~~~~~ 251 (507)
.+.. ....+..........++..+++.........++++++|+.+ . .+..+... .. .....+.
T Consensus 222 ~~~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~----~~-~~~~~~s 294 (710)
T 2xdw_A 222 DILCAE--FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN----FE-GEYDYVT 294 (710)
T ss_dssp CEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS----SS-SCEEEEE
T ss_pred ceEEec--cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC----CC-cEEEEEe
Confidence 2211 11112222334444555444444332222257899999876 4 57665321 11 1112222
Q ss_pred -ECCEEEEEeccCCCCCcceEEEEEcCcC---eeEEec
Q 010571 252 -IDENWYIVGGGDNNNGCQETIVLNMTKL---AWSILT 285 (507)
Q Consensus 252 -~~~~l~v~GG~~~~~~~~d~~~~d~~~~---~W~~~~ 285 (507)
-++.+++.+..+ .....++++|+.+. .|..+.
T Consensus 295 ~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 295 NEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp EETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEE
T ss_pred ccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceecc
Confidence 356677775432 22357899998775 588764
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.65 E-value=2.1 Score=45.19 Aligned_cols=193 Identities=8% Similarity=-0.019 Sum_probs=87.2
Q ss_pred ceEEEEECCC-CcEEEeecCCCCCCCcccceEEEEC-CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCC
Q 010571 117 MIVRFIDLET-NLCGVMETSGKVPVARGGHSVTLVG-SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 117 ~~~~~~d~~t-~~W~~~~~~g~~p~~r~~~~~~~~~-~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~ 194 (507)
..++++|+.+ +.-..+... .+.......++.-+ ..|++....... ....++.+|+.+++...+.......--..
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~pDg~~l~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLG--KEQDIYLARVNWRDPQHLSFQRQSRDQ--KKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEEECSSTTCCCEEECCC--SCSSEEEEEEEEEETTEEEEEEEETTS--SEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred eEEEEEECCCCCceEEecCC--CCcceEEEEEEeCCCCEEEEEEecccC--CeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 3788999988 775555311 01111111122233 345544331111 24579999999988776643211000001
Q ss_pred CceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE-EEEEeccCCCCCcceE
Q 010571 195 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN-WYIVGGGDNNNGCQET 271 (507)
Q Consensus 195 ~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~d~ 271 (507)
....+...++.+++.++.++ ...+|.+|+... ...+.. + .......+.+ +++ |++.+. ........+
T Consensus 339 ~~~~~~spdg~~~~~~~~~g---~~~l~~~~~~~~-~~~l~~-~----~~~v~~~~~~s~dg~~l~~~~~-~~~~~~~~l 408 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTG---FQHLYRIDSKGK-AAALTH-G----NWSVDELLAVDEKAGLAYFRAG-IESARESQI 408 (741)
T ss_dssp CSCCEECTTSCEEEEECTTS---SCEEEEECSSSC-EEESCC-S----SSCEEEEEEEETTTTEEEEEEC-SSCTTCBEE
T ss_pred CCceEECCCCeEEEEecCCC---ccEEEEEcCCCC-eeeeee-c----ceEEEeEeEEeCCCCEEEEEEe-CCCCceEEE
Confidence 12334445665665555432 256888887665 554421 1 1111122223 444 444443 222223456
Q ss_pred EEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 272 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 272 ~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
|..+.....-..+... .........++...| ++...+......++.++....
T Consensus 409 ~~~~~~g~~~~~l~~~---------~~~~~~~~spdg~~l-~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 409 YAVPLQGGQPQRLSKA---------PGMHSASFARNASVY-VDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EEEETTCCCCEECCCS---------CSEEEEEECTTSSEE-EEEEEETTEEEEEEEEETTSC
T ss_pred EEEEcCCCCeeecccC---------CCceEEEECCCCCEE-EEEecCCCCCCeEEEEEcCCC
Confidence 6666544433333221 111222233333344 333333334567888887543
No 128
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.56 E-value=1.6 Score=41.99 Aligned_cols=199 Identities=15% Similarity=0.139 Sum_probs=93.4
Q ss_pred CEEEEEcccCCCCCCcceEEEEECCCCcE-----EEeecCCCCCCCccc-ceEEEE-C-CEEEEEcCcCCCCCccCcEEE
Q 010571 101 TKLLILGGHYKKSSDSMIVRFIDLETNLC-----GVMETSGKVPVARGG-HSVTLV-G-SRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 101 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W-----~~~~~~g~~p~~r~~-~~~~~~-~-~~l~~~GG~~~~~~~~~~~~~ 172 (507)
+.+++.|+.+. .+.+||+.+..= ..... ......... .+++.. + +.+++.|+.+ ..+.+
T Consensus 126 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~i 192 (416)
T 2pm9_A 126 DNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSS------NFASI 192 (416)
T ss_dssp TTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEEE
T ss_pred CCEEEEEcCCC------eEEEEECCCCcccccccccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEEE
Confidence 66777776432 388888877640 01110 011111111 222222 2 4677777653 35999
Q ss_pred EEcCCCcEEEeecCCCCCC--CCCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCC-CCCcceE
Q 010571 173 LDLETMTWDAVEVTQTPPA--PRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV-TGRAGHA 248 (507)
Q Consensus 173 ~d~~t~~W~~~~~~g~~p~--~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p-~~r~~~~ 248 (507)
||+.+.+-...-....... ...-.+++...++ .+++.|+.++. ...+.+||+.+..-.. .... .......
T Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~~~----~~~~~~~~~~v~ 266 (416)
T 2pm9_A 193 WDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANTPL----QTLNQGHQKGIL 266 (416)
T ss_dssp EETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTSCS----BCCCSCCSSCEE
T ss_pred EECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCCCc----EEeecCccCcee
Confidence 9998876544331110000 1111223333332 46666665421 1267888887643111 1111 1112223
Q ss_pred EEEE---CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeE
Q 010571 249 GITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEV 325 (507)
Q Consensus 249 ~~~~---~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v 325 (507)
.+.+ ++.+++.|+.++ .+.+||+.+..-.. .+.... +...+....+++..+++.|+.+ ..+
T Consensus 267 ~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~--~~~~~~-----~~v~~~~~s~~~~~~l~s~~~d----~~i 330 (416)
T 2pm9_A 267 SLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQLS--QFPARG-----NWCFKTKFAPEAPDLFACASFD----NKI 330 (416)
T ss_dssp EEEECSSCSSCEEEEESSS-----EEEEECSSSCCEEE--EEECSS-----SCCCCEEECTTCTTEEEECCSS----SEE
T ss_pred EEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCccce--eecCCC-----CceEEEEECCCCCCEEEEEecC----CcE
Confidence 3333 456777777543 47888887764322 121110 1111222333332577777764 457
Q ss_pred EEEECCCCC
Q 010571 326 FVMRLKPRD 334 (507)
Q Consensus 326 ~~~~~~~~~ 334 (507)
.++++....
T Consensus 331 ~iw~~~~~~ 339 (416)
T 2pm9_A 331 EVQTLQNLT 339 (416)
T ss_dssp EEEESCCCC
T ss_pred EEEEccCCC
Confidence 788876543
No 129
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.54 E-value=1.4 Score=40.30 Aligned_cols=148 Identities=8% Similarity=0.042 Sum_probs=73.2
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 151 ~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
++..++.|+.+ ..+..||... -.... ..+....-.+++...++. ++.|+.+ ..+.+||+.+..
T Consensus 154 ~~~~l~~~~~d------~~i~i~d~~~--~~~~~---~~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~ 216 (313)
T 3odt_A 154 SENKFLTASAD------KTIKLWQNDK--VIKTF---SGIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGD 216 (313)
T ss_dssp TTTEEEEEETT------SCEEEEETTE--EEEEE---CSSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCC
T ss_pred CCCEEEEEECC------CCEEEEecCc--eEEEE---eccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchh
Confidence 45666666653 3588888332 22111 111222223444456665 6666654 468999988765
Q ss_pred EEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCce
Q 010571 231 WSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEH 309 (507)
Q Consensus 231 W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 309 (507)
-...-. ........+.+ .+..++.|+.++ .+.+||+.+......-..+ ......+....+.
T Consensus 217 ~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~--------~~~i~~~~~~~~~ 278 (313)
T 3odt_A 217 VLRTYE-----GHESFVYCIKLLPNGDIVSCGEDR-----TVRIWSKENGSLKQVITLP--------AISIWSVDCMSNG 278 (313)
T ss_dssp EEEEEE-----CCSSCEEEEEECTTSCEEEEETTS-----EEEEECTTTCCEEEEEECS--------SSCEEEEEECTTS
T ss_pred hhhhhh-----cCCceEEEEEEecCCCEEEEecCC-----EEEEEECCCCceeEEEecc--------CceEEEEEEccCC
Confidence 333111 11111223333 232455555432 5888998877644322221 1122333343333
Q ss_pred EEEEEcccCCCcCCeEEEEECCCCCCCCC
Q 010571 310 HLVAFGGYNGKYNNEVFVMRLKPRDIPRP 338 (507)
Q Consensus 310 ~l~v~GG~~~~~~~~v~~~~~~~~~w~~~ 338 (507)
.++ .|+.+ ..+..+++....+...
T Consensus 279 ~~~-~~~~d----g~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 279 DII-VGSSD----NLVRIFSQEKSRWASE 302 (313)
T ss_dssp CEE-EEETT----SCEEEEESCGGGCCC-
T ss_pred CEE-EEeCC----CcEEEEeCCCCceeeh
Confidence 444 46654 4688899877666543
No 130
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.53 E-value=1.5 Score=40.47 Aligned_cols=232 Identities=8% Similarity=-0.025 Sum_probs=112.1
Q ss_pred ccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEE
Q 010571 29 YKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLIL 106 (507)
Q Consensus 29 ~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~ 106 (507)
.+-+.+.. ++.||+..-. ...+++||+.++........ .+....+..-++++|+.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~------------------~~~~~i~~~~dG~l~v~ 70 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMD------------------APVSSVALRQSGGYVAT 70 (297)
T ss_dssp BEEEEEEETTTTEEEEEETT-----TTEEEEEETTTCCEEEEECS------------------SCEEEEEEBTTSSEEEE
T ss_pred cccCCeEECCCCEEEEEECC-----CCEEEEEECCCCcEEEEeCC------------------CceEEEEECCCCCEEEE
Confidence 33444444 4678887642 35689999998765443321 11122222225666664
Q ss_pred cccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCC------CCccCcEEEEEcCCC
Q 010571 107 GGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRS------RKLLNDVHFLDLETM 178 (507)
Q Consensus 107 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~------~~~~~~~~~~d~~t~ 178 (507)
. ...++.||+.+++++.+...... .+......+.+ ++.+|+- ..... ......++.+|+. +
T Consensus 71 ~--------~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~di~~d~dG~l~~~-~~~~~~~~~~~~~~~~~l~~~d~~-g 139 (297)
T 3g4e_A 71 I--------GTKFCALNWKEQSAVVLATVDND-KKNNRFNDGKVDPAGRYFAG-TMAEETAPAVLERHQGALYSLFPD-H 139 (297)
T ss_dssp E--------TTEEEEEETTTTEEEEEEECCTT-CSSEEEEEEEECTTSCEEEE-EEECCSBTTBCCTTCEEEEEECTT-S
T ss_pred E--------CCeEEEEECCCCcEEEEEecCCC-CCCCCCCCEEECCCCCEEEe-cCCcccccccccCCCcEEEEEECC-C
Confidence 3 13599999999998877532111 11111222333 4576653 22111 0123468888875 3
Q ss_pred cEEEeecCCCCCCCCCCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEEC--CCCcEEeeeecCCCCCCCcceEEEEE--C
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDL--QTNEWSQPEIKGDLVTGRAGHAGITI--D 253 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~--~~~~W~~~~~~~~~p~~r~~~~~~~~--~ 253 (507)
+...+......| ..++...+ +.+|+.... .+.|++|++ .++...........+..........+ +
T Consensus 140 ~~~~~~~~~~~p-----ngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 140 HVKKYFDQVDIS-----NGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp CEEEEEEEESBE-----EEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred CEEEEeeccccc-----cceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 443332110111 23444434 357776543 256888886 45554321111111111112223333 5
Q ss_pred CEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEE--cCceEEEEEccc
Q 010571 254 ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII--EGEHHLVAFGGY 317 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~l~v~GG~ 317 (507)
+++|+..... ..+.+||+.+.+......++.. ...++.+ ++...|||....
T Consensus 210 G~lwva~~~~-----~~v~~~d~~tG~~~~~i~~p~~--------~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 210 GKLWVACYNG-----GRVIRLDPVTGKRLQTVKLPVD--------KTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp SCEEEEEETT-----TEEEEECTTTCCEEEEEECSSS--------BEEEEEEESGGGCEEEEEEBC
T ss_pred CCEEEEEcCC-----CEEEEEcCCCceEEEEEECCCC--------CceEEEEeCCCCCEEEEEcCC
Confidence 6788764311 2588999987665433233211 1222333 334578876654
No 131
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.52 E-value=2.6 Score=43.28 Aligned_cols=126 Identities=16% Similarity=0.116 Sum_probs=69.6
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcc
Q 010571 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGG 108 (507)
Q Consensus 31 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG 108 (507)
.+.++.++.||+.+.. +.++.+|..|++ |+.-...... ..+.......+.+..+++||+...
T Consensus 62 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~----------~~~~~~~~~~g~a~~~~~v~~~t~ 125 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDD----------IRPCCDVVNRGAAIYGDKVFFGTL 125 (582)
T ss_dssp CCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTT----------CCCSSCSCCCCCEEETTEEEEEET
T ss_pred eccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcc----------cccccccCCCccEEECCEEEEEeC
Confidence 3446679999998662 249999999874 8764432210 000000112344567899888532
Q ss_pred cCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCc--ccceEEEECC------EEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 109 HYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVAR--GGHSVTLVGS------RLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 109 ~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r--~~~~~~~~~~------~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
...++.+|..|++ |+.... .+... ...+-++.++ .+| +|...........++.||+.|+
T Consensus 126 -------dg~l~AlD~~TG~~~W~~~~~---~~~~~~~~~~sP~v~~~~~~G~~~v~-vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 126 -------DASVVALNKNTGKVVWKKKFA---DHGAGYTMTGAPTIVKDGKTGKVLLI-HGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp -------TTEEEEEESSSCCEEEEEECS---CGGGTCBCCSCCEEEECTTTCCEEEE-ECCBCGGGCCBCEEEEECTTTC
T ss_pred -------CCEEEEEECCCCCEEeeecCC---CCCcCcccccCCEEeCCCcCCcEEEE-EeccccccCCCCEEEEEECCCC
Confidence 2359999998884 876431 11111 1112234455 454 4432111112457999999887
Q ss_pred c--EEEe
Q 010571 179 T--WDAV 183 (507)
Q Consensus 179 ~--W~~~ 183 (507)
+ |+..
T Consensus 195 ~~~W~~~ 201 (582)
T 1flg_A 195 EEIWMRP 201 (582)
T ss_dssp CEEEEEE
T ss_pred CEEeecC
Confidence 5 8654
No 132
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.52 E-value=1.8 Score=41.32 Aligned_cols=178 Identities=9% Similarity=0.006 Sum_probs=89.2
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEEC--CEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFD--QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~ 80 (507)
..+.+||+........... ......-.+++... +.+++.|+.+ ..+.++|+.+.....+.....
T Consensus 96 g~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~------- 161 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQG--MGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVFAKTDS------- 161 (383)
T ss_dssp SCEEEEETTSTTCEEEECC--CSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEEECCCC-------
T ss_pred CeEEEEeCCCcccceeeec--CCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEEeccCC-------
Confidence 3456778777766654410 01112222333333 3666666633 458889998766555443211
Q ss_pred cCCccCCCCCccceeeEE-ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCE-EEE
Q 010571 81 DSGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSR-LII 156 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~-l~~ 156 (507)
. ...-.+++. .++.+++.|+.+ ..+.+||+....-..+. . ......++.+ ++. +++
T Consensus 162 -------~-~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~---~---h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 162 -------W-DYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEK---L---HKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp -------S-SCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEE---C---SSSCEEEEEECSSCTTEEE
T ss_pred -------C-CCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEec---c---CCCcEEEEEECCCCCCEEE
Confidence 0 011112222 255666666643 35889998544333332 1 1111222333 233 777
Q ss_pred EcCcCCCCCccCcEEEEEcCC----CcEEEeecCCCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 157 FGGEDRSRKLLNDVHFLDLET----MTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 157 ~GG~~~~~~~~~~~~~~d~~t----~~W~~~~~~g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
.|+.+ ..+.+||+.+ ........ ....-.+++... ++.+++.|+.+ ..+.+||+.+..
T Consensus 222 s~~~d------~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd~~~~~ 284 (383)
T 3ei3_B 222 TSSVD------ATVKLWDLRNIKDKNSYIAEMP-----HEKPVNAAYFNPTDSTKLLTTDQR-----NEIRVYSSYDWS 284 (383)
T ss_dssp EEETT------SEEEEEEGGGCCSTTCEEEEEE-----CSSCEEEEEECTTTSCEEEEEESS-----SEEEEEETTBTT
T ss_pred EEeCC------CEEEEEeCCCCCcccceEEEec-----CCCceEEEEEcCCCCCEEEEEcCC-----CcEEEEECCCCc
Confidence 77653 3588899876 33333221 111122333334 55577777654 468899987643
No 133
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.51 E-value=1.8 Score=41.30 Aligned_cols=186 Identities=9% Similarity=0.055 Sum_probs=98.7
Q ss_pred EEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCC-CCcccceEEEEC--CEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 102 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVP-VARGGHSVTLVG--SRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 102 ~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p-~~r~~~~~~~~~--~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
.+++.|+.+. .+.+||+.+....... ... ....-.+++... +.+++.|+.+ ..+.++|+.+.
T Consensus 87 ~~l~s~~~dg------~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDYDVQNKTSFI---QGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS------CEEEEETTSTTCEEEE---CCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC
T ss_pred CEEEEEcCCC------eEEEEeCCCcccceee---ecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC
Confidence 5777776532 3889999988776654 211 111222333333 3666666643 35889999876
Q ss_pred cEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE-
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN- 255 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~- 255 (507)
....+.... .......+++...++.+++.|+.+ ..+.+||+.......+.. ......++.+ ++.
T Consensus 152 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~------h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 152 VIQVFAKTD--SWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKL------HKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEEECCC--CSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEEC------SSSCEEEEEECSSCTT
T ss_pred ceEEEeccC--CCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEecc------CCCcEEEEEECCCCCC
Confidence 666554211 111122334444555577777654 468899985444333321 1122233333 334
Q ss_pred EEEEeccCCCCCcceEEEEEcCc----CeeEEeccCCCCCCCCCCCCceEEEEEcC-ceEEEEEcccCCCcCCeEEEEEC
Q 010571 256 WYIVGGGDNNNGCQETIVLNMTK----LAWSILTSVKGRNPLASEGLSVCSAIIEG-EHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 256 l~v~GG~~~~~~~~d~~~~d~~~----~~W~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
+++.|+.++ .+.+||+.+ ........ .......+.+.. +..+++.|+.+ ..+.++|+
T Consensus 219 ~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~~l~~~~~d----~~i~iwd~ 280 (383)
T 3ei3_B 219 LMATSSVDA-----TVKLWDLRNIKDKNSYIAEMP---------HEKPVNAAYFNPTDSTKLLTTDQR----NEIRVYSS 280 (383)
T ss_dssp EEEEEETTS-----EEEEEEGGGCCSTTCEEEEEE---------CSSCEEEEEECTTTSCEEEEEESS----SEEEEEET
T ss_pred EEEEEeCCC-----EEEEEeCCCCCcccceEEEec---------CCCceEEEEEcCCCCCEEEEEcCC----CcEEEEEC
Confidence 777776543 478899876 33222111 112233334443 44566667654 46788887
Q ss_pred CCC
Q 010571 331 KPR 333 (507)
Q Consensus 331 ~~~ 333 (507)
.+.
T Consensus 281 ~~~ 283 (383)
T 3ei3_B 281 YDW 283 (383)
T ss_dssp TBT
T ss_pred CCC
Confidence 544
No 134
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.46 E-value=1.9 Score=41.21 Aligned_cols=204 Identities=8% Similarity=0.055 Sum_probs=95.0
Q ss_pred EEEEEcccCCCCCCcceEEEEECCCCc------EEEeecCCCCCC---CcccceEEEE-----CCEE-EEEcCcCCCCCc
Q 010571 102 KLLILGGHYKKSSDSMIVRFIDLETNL------CGVMETSGKVPV---ARGGHSVTLV-----GSRL-IIFGGEDRSRKL 166 (507)
Q Consensus 102 ~iyv~GG~~~~~~~~~~~~~~d~~t~~------W~~~~~~g~~p~---~r~~~~~~~~-----~~~l-~~~GG~~~~~~~ 166 (507)
.+++.|+.+. .+.+||..++. +..+. ..+. ...-.+++.. ++.. ++.|+.+
T Consensus 82 ~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d----- 147 (397)
T 1sq9_A 82 CLVATTSFSG------DLLFYRITREDETKKVIFEKLD---LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK----- 147 (397)
T ss_dssp EEEEEEETTS------CEEEEEEEECTTTCCEEEEEEC---CSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----
T ss_pred cEEEEEcCCC------CEEEEEccCCcccccccceeec---ccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----
Confidence 7777776532 37788877766 66654 2211 1112223333 3445 6777653
Q ss_pred cCcEEEEEcCC------Cc---EE---Eeec--CCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEE
Q 010571 167 LNDVHFLDLET------MT---WD---AVEV--TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 167 ~~~~~~~d~~t------~~---W~---~~~~--~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
..+.+||+.+ .. |. .+.. .........-.++....++ +++.|+.+ ..+.+||+.+..-.
T Consensus 148 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~ 220 (397)
T 1sq9_A 148 -GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPL 220 (397)
T ss_dssp -SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEE
T ss_pred -CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCcee
Confidence 3577887765 22 11 1110 0001112223345555667 77777654 46899999876544
Q ss_pred eeeecCC--CCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEE-eccCC--CCCCCC--CCCCceEEE
Q 010571 233 QPEIKGD--LVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSI-LTSVK--GRNPLA--SEGLSVCSA 303 (507)
Q Consensus 233 ~~~~~~~--~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~-~~~~~--~~~p~~--~~~~~~~~~ 303 (507)
..-. +. .+.......++.+ ++.+++.|+.++ ....+.+||+.+..-.. +.... ...+.. .+......+
T Consensus 221 ~~~~-~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 297 (397)
T 1sq9_A 221 YNFE-SQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 297 (397)
T ss_dssp EEEE-CCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE
T ss_pred EEEe-ccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEE
Confidence 3211 10 0000112233333 456777776431 11368899987664322 21100 000000 012233334
Q ss_pred EEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 304 IIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 304 ~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
.+..+..+++.|+.+ ..+.++|+...
T Consensus 298 ~~~~~~~~l~~~~~d----g~i~iwd~~~~ 323 (397)
T 1sq9_A 298 SFNDSGETLCSAGWD----GKLRFWDVKTK 323 (397)
T ss_dssp EECSSSSEEEEEETT----SEEEEEETTTT
T ss_pred EECCCCCEEEEEeCC----CeEEEEEcCCC
Confidence 444333455666644 46778887543
No 135
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.35 E-value=1.3 Score=40.94 Aligned_cols=230 Identities=12% Similarity=0.078 Sum_probs=107.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
++.+++.|+.+ ..+.++|..++.-...-.... ..........++++++.|+.+
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~----------------~~v~~~~~~~~~~~l~s~s~d------ 76 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTE----------------TPVRAGKFIARKNWIIVGSDD------ 76 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS----------------SCEEEEEEEGGGTEEEEEETT------
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeeccC----------------CcEEEEEEeCCCCEEEEECCC------
Confidence 45566666633 458889998875432211110 111111122255566666642
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCC
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~ 194 (507)
..+.+||+.++.-...- ........++.+ ++.+++.|+.+ ..+.++|+.+..=......+. ...
T Consensus 77 ~~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~~~~~~~~~h---~~~ 142 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDF-----EAHPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEGH---EHF 142 (304)
T ss_dssp SEEEEEETTTCCEEEEE-----ECCSSCEEEEEECSSSSEEEEEETT------SCEEEEEGGGTTEEEEEECCC---CSC
T ss_pred CEEEEEECCCCcEEEEE-----eCCCCcEEEEEEcCCCCEEEEECCC------CeEEEEECCCCcchhhhhccc---CCc
Confidence 34888998887543221 001111122223 34566666654 258888886652211111111 111
Q ss_pred CceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE----CCEEEEEeccCCCCCcc
Q 010571 195 DHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI----DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 195 ~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~l~v~GG~~~~~~~~ 269 (507)
-.+++..+ ++.+++.|+.+ ..+.+||+.+..-......+ ..+ ....+.+ ++.+++.|+.++
T Consensus 143 v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~~~~~~~~~~---~~~-~v~~~~~~~~~~~~~l~s~s~D~----- 208 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLTTG---QER-GVNYVDYYPLPDKPYMITASDDL----- 208 (304)
T ss_dssp EEEEEECTTCTTEEEEEETT-----SEEEEEETTCSSCSEEEECC---CTT-CEEEEEECCSTTCCEEEEEETTS-----
T ss_pred EEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCccceeccC---CcC-cEEEEEEEEcCCCCEEEEEcCCC-----
Confidence 11222222 44477777765 45888887653211100001 111 1122222 345666666433
Q ss_pred eEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 270 ETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 270 d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
.+.++|+.+..-. ..+.+. ......+.+..+..+++.|+.+ ..+.++|+.+.
T Consensus 209 ~i~iWd~~~~~~~--~~~~~h------~~~v~~~~~~p~~~~l~s~s~D----g~i~iWd~~~~ 260 (304)
T 2ynn_A 209 TIKIWDYQTKSCV--ATLEGH------MSNVSFAVFHPTLPIIISGSED----GTLKIWNSSTY 260 (304)
T ss_dssp EEEEEETTTTEEE--EEEECC------SSCEEEEEECSSSSEEEEEETT----SCEEEEETTTC
T ss_pred eEEEEeCCCCccc--eeeCCC------CCCEEEEEECCCCCEEEEEcCC----CeEEEEECCCC
Confidence 4778888776422 222211 1223333444444466667765 34667776543
No 136
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.28 Score=52.44 Aligned_cols=108 Identities=13% Similarity=0.143 Sum_probs=61.3
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--C--CEEEEEcCcCCCCCccCcEEEEEc
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~l~~~GG~~~~~~~~~~~~~~d~ 175 (507)
++.+++.||.+ ..+.+||..+.++..+.. +......-.++.+ + +..++.|+.+ ..+.++|+
T Consensus 20 dg~~latg~~d------g~I~vwd~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSD------KTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETT------TEEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEE
T ss_pred CCCeEEEEECC------CcEEEEecCCCCCcccee---ccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEEC
Confidence 45566666543 247788887777766652 2222222233333 2 5677777754 35899999
Q ss_pred CCCcEEEeecCCCCCCCCCCceEEEEcC--cEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 176 ETMTWDAVEVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 176 ~t~~W~~~~~~g~~p~~r~~~~~~~~~~--~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
.++.|..+..... ....-.++....+ +.+++.|+.+ ..+.+||+.+.
T Consensus 85 ~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 85 ENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp ETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred CCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 9988766654211 1112222333333 4577777765 46888888765
No 137
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.33 E-value=1 Score=40.51 Aligned_cols=211 Identities=13% Similarity=0.047 Sum_probs=100.9
Q ss_pred CeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCC
Q 010571 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSG 83 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~ 83 (507)
.++||+.......++. .....-+++++. ++.||+... ...+++||+.+.....+....
T Consensus 48 i~~~~~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~~----------- 106 (270)
T 1rwi_B 48 VVKLATGSTGTTVLPF----NGLYQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPFDG----------- 106 (270)
T ss_dssp EEEECC-----EECCC----CSCCSCCCEEECTTCCEEEEET------TTEEEEECTTCSCCEECCCCS-----------
T ss_pred EEEecCCCcccceEee----CCcCCcceeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeecCC-----------
Confidence 4566665554443331 111122344444 456777654 246889998876544332111
Q ss_pred ccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcC
Q 010571 84 LLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGED 161 (507)
Q Consensus 84 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~ 161 (507)
...-+.++.. +++||+.... ...+.+|+..+......... ... .-..++.. ++.+|+....
T Consensus 107 ------~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~-~~~---~p~~i~~~~~g~l~v~~~~- 169 (270)
T 1rwi_B 107 ------LNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFT-GLN---DPDGVAVDNSGNVYVTDTD- 169 (270)
T ss_dssp ------CSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCC-SCC---SCCCEEECTTCCEEEEEGG-
T ss_pred ------cCCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccc-cCC---CceeEEEeCCCCEEEEECC-
Confidence 0111233332 5678887532 23588887766554432211 111 11223332 4577776432
Q ss_pred CCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCC
Q 010571 162 RSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV 241 (507)
Q Consensus 162 ~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p 241 (507)
.+.+.+||+.+..-...... .. ..-.+++...++.+|+..... +.+.+||+....-.... .
T Consensus 170 -----~~~i~~~~~~~~~~~~~~~~-~~---~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~~~~~~~~~~~----~- 230 (270)
T 1rwi_B 170 -----NNRVVKLEAESNNQVVLPFT-DI---TAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTSTVLP----F- 230 (270)
T ss_dssp -----GTEEEEECTTTCCEEECCCS-SC---CSEEEEEECTTCCEEEEETTT-----SCEEEECTTCSCCEECC----C-
T ss_pred -----CCEEEEEecCCCceEeeccc-CC---CCceEEEECCCCCEEEEECCC-----CcEEEEcCCCCcceeec----c-
Confidence 34699999887654433211 11 112234444555688765432 46889998765432211 1
Q ss_pred CCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcC
Q 010571 242 TGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 242 ~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~ 277 (507)
........+.+ ++++|+....+ +.+.+|++.
T Consensus 231 ~~~~~p~~i~~~~~g~l~v~~~~~-----~~v~~~~~~ 263 (270)
T 1rwi_B 231 TGLNTPLAVAVDSDRTVYVADRGN-----DRVVKLTSL 263 (270)
T ss_dssp CSCSCEEEEEECTTCCEEEEEGGG-----TEEEEECCC
T ss_pred CCCCCceeEEECCCCCEEEEECCC-----CEEEEEcCC
Confidence 11122233444 45777775432 246666643
No 138
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.30 E-value=3 Score=42.94 Aligned_cols=128 Identities=17% Similarity=0.130 Sum_probs=71.2
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEC-CCC--ceeEeeeccccccCccccCCccCCCCCc---cceeeEE--ECCE
Q 010571 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDL-RSL--AWSNLRLETELDADKTEDSGLLEVLPPM---SDHCMVK--WGTK 102 (507)
Q Consensus 31 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~-~t~--~W~~~~~~~~~~~~~~~~~~~~~~p~~r---~~~~~~~--~~~~ 102 (507)
.+-++.++.||+.+.. ...++.||. .++ .|+.-...... ..+..+ ...+.++ .+++
T Consensus 56 ~tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~-----------~~~~~~~~~~~~g~av~p~~g~ 119 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPA-----------ARAVACCDLVNRGLAYWPGDGK 119 (599)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGG-----------GGGGCSSCSCCCCCEEECCCSS
T ss_pred eccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCcc-----------ccccccccccccceEEEecCCc
Confidence 4556679999998652 346999999 887 48764432210 000011 1123344 4666
Q ss_pred ----EEEEcccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCC-cccceEEEECCEEEEEcCcCCCCCccCcEEEEEc
Q 010571 103 ----LLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVA-RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 103 ----iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~ 175 (507)
||+... ...++.+|..|++ |+.... ..... ....+-++.++.+|+-.+.... .....++.||.
T Consensus 120 ~~~rV~v~t~-------dg~l~AlDa~TG~~~W~~~~~--~~~~~~~~~ssP~v~~g~V~vg~~g~e~-g~~g~v~A~D~ 189 (599)
T 1w6s_A 120 TPALILKTQL-------DGNVAALNAETGETVWKVENS--DIKVGSTLTIAPYVVKDKVIIGSSGAEL-GVRGYLTAYDV 189 (599)
T ss_dssp SCCEEEEECT-------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEECCBCGGG-TCCCEEEEEET
T ss_pred ceeEEEEEcC-------CCEEEEEECCCCCEEEeecCC--CCCccceeecCCEEECCEEEEEeccccc-CCCCeEEEEEC
Confidence 777532 2358999998885 875431 11111 1122334568887764322111 12347999999
Q ss_pred CCCc--EEEee
Q 010571 176 ETMT--WDAVE 184 (507)
Q Consensus 176 ~t~~--W~~~~ 184 (507)
.|++ |+.-.
T Consensus 190 ~TG~~~W~~~~ 200 (599)
T 1w6s_A 190 KTGEQVWRAYA 200 (599)
T ss_dssp TTCCEEEEEES
T ss_pred CCCcEEEEEcC
Confidence 8875 87654
No 139
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.28 E-value=0.075 Score=58.64 Aligned_cols=13 Identities=15% Similarity=0.665 Sum_probs=5.7
Q ss_pred CeEeeCCCCCeEEe
Q 010571 5 SWHLELPYDLWVTL 18 (507)
Q Consensus 5 ~~~~d~~~~~W~~~ 18 (507)
+|+-|+. ..|..-
T Consensus 13 vwv~~~~-~~~~~~ 25 (1080)
T 2dfs_A 13 VWIPDPE-EVWKSA 25 (1080)
T ss_dssp EEEEETT-TEEEEE
T ss_pred EEEECCC-CceEEE
Confidence 4444432 445543
No 140
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=95.27 E-value=0.52 Score=37.68 Aligned_cols=41 Identities=22% Similarity=0.431 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 449 KLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 449 ~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
+++..+.++..++.... ++..+...++++.+.++++++++.
T Consensus 80 eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~led~e 124 (129)
T 2fxo_A 80 QLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDDLE 124 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444333 455555556666666666666543
No 141
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.26 E-value=1.2 Score=41.61 Aligned_cols=197 Identities=10% Similarity=-0.003 Sum_probs=94.9
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
..+|+||+.......+.. +....-++++.. ++.+|+.+... ......+++||+.++....+-....
T Consensus 66 ~~i~~~d~~~~~~~~~~~----~~~~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~-------- 132 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFV----SHKANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNLQDIIEDLS-------- 132 (333)
T ss_dssp CEEEEECTTTCCEEEEEE----CSSSSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSCEEEECSSS--------
T ss_pred CEEEEEeCCCCcEEEEee----CCCCCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEEEEEEccCc--------
Confidence 347788888887776542 111222334333 56677765322 1122469999998877653321110
Q ss_pred CCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CC-EEEEEcC
Q 010571 82 SGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGG 159 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~l~~~GG 159 (507)
+..+....++.-++.+|+.............++.||+.+++...+.. ... ....++.- ++ .+|+...
T Consensus 133 ------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~---~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 133 ------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS---VANGIALSTDEKVLWVTET 201 (333)
T ss_dssp ------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES---SEEEEEECTTSSEEEEEEG
T ss_pred ------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC---cccceEECCCCCEEEEEeC
Confidence 01111111222257788754321111124569999998877765531 111 11122222 33 5777542
Q ss_pred cCCCCCccCcEEEEEcCC--CcEEEeecC--CCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 160 EDRSRKLLNDVHFLDLET--MTWDAVEVT--QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 160 ~~~~~~~~~~~~~~d~~t--~~W~~~~~~--g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
. .+.+++||+.+ ......... ...+....-..++...++.+|+..... +.+.+||+.......+
T Consensus 202 ~------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-----~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 202 T------ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ-----GRVLVFNKRGYPIGQI 269 (333)
T ss_dssp G------GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT-----TEEEEECTTSCEEEEE
T ss_pred C------CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC-----CEEEEECCCCCEEEEE
Confidence 2 34689999854 233321100 001100111234444556677765321 4688999865444433
No 142
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.23 E-value=1.4 Score=43.08 Aligned_cols=147 Identities=10% Similarity=0.081 Sum_probs=77.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~ 176 (507)
++.+++.|+.+. .|.++|+.+..-.... ........-.++.+ ++.+++.|+.+. .|.++|+.
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~---~~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFI---KGIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEE---CCCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEE---EccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEeecc
Confidence 456777777543 3888888776543332 11111111122333 455666776542 48889998
Q ss_pred CCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE---C
Q 010571 177 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---D 253 (507)
Q Consensus 177 t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~ 253 (507)
+........... ......++....++.+++.|+.+ ..+.++|+....-.. +......-.++.+ +
T Consensus 196 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~~~~------~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 196 GNILRVFASSDT--INIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKELWN------LRMHKKKVTHVALNPCC 262 (435)
T ss_dssp SCEEEEEECCSS--CSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCBCCC------SBCCSSCEEEEEECTTC
T ss_pred CCceeEEeccCC--CCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcceeEE------EecccceEEeeeecCCC
Confidence 776655543221 12222344455566677888765 358888876533211 1111112233333 2
Q ss_pred CEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 254 ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
+.+++.|+.++ .+.+||+.+.
T Consensus 263 ~~~~~s~s~d~-----~v~iwd~~~~ 283 (435)
T 4e54_B 263 DWFLATASVDQ-----TVKIWDLRQV 283 (435)
T ss_dssp SSEEEEEETTS-----BCCEEETTTC
T ss_pred ceEEEEecCcc-----eeeEEecccc
Confidence 34677776543 3567787654
No 143
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.18 E-value=0.96 Score=44.40 Aligned_cols=150 Identities=7% Similarity=0.088 Sum_probs=71.6
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 115 (507)
++.+++.|+.+ ..+.++|+.++....+..... ......+++.. ++.+++.|+.+.
T Consensus 176 ~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~g~~dg---- 231 (435)
T 4e54_B 176 NTNQFYASSME-----GTTRLQDFKGNILRVFASSDT---------------INIWFCSLDVSASSRMVVTGDNVG---- 231 (435)
T ss_dssp CTTEEEEECSS-----SCEEEEETTSCEEEEEECCSS---------------CSCCCCCEEEETTTTEEEEECSSS----
T ss_pred CCCEEEEEeCC-----CEEEEeeccCCceeEEeccCC---------------CCccEEEEEECCCCCEEEEEeCCC----
Confidence 45566666643 347888988776554443221 11112222222 566777776432
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
.+.++|..+..-. .+......-.++.+ ++.+++.|+.+. .+.+||+.+..-...... .....
T Consensus 232 --~i~~wd~~~~~~~------~~~~h~~~v~~v~~~p~~~~~~~s~s~d~------~v~iwd~~~~~~~~~~~~-~~~h~ 296 (435)
T 4e54_B 232 --NVILLNMDGKELW------NLRMHKKKVTHVALNPCCDWFLATASVDQ------TVKIWDLRQVRGKASFLY-SLPHR 296 (435)
T ss_dssp --BEEEEESSSCBCC------CSBCCSSCEEEEEECTTCSSEEEEEETTS------BCCEEETTTCCSSSCCSB-CCBCS
T ss_pred --cEeeeccCcceeE------EEecccceEEeeeecCCCceEEEEecCcc------eeeEEecccccccceEEE-eeecc
Confidence 4888887654211 11111111223333 235677776542 467788765432111000 00001
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
..-.+++...++..++.|+.+ ..|.+||+.+..
T Consensus 297 ~~v~~~~~spdg~~l~s~~~D-----~~i~iwd~~~~~ 329 (435)
T 4e54_B 297 HPVNAACFSPDGARLLTTDQK-----SEIRVYSASQWD 329 (435)
T ss_dssp SCEEECCBCTTSSEEEEEESS-----SCEEEEESSSSS
T ss_pred ccccceeECCCCCeeEEEcCC-----CEEEEEECCCCc
Confidence 111111222455566777754 458888887643
No 144
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=95.17 E-value=0.21 Score=36.96 Aligned_cols=50 Identities=18% Similarity=0.296 Sum_probs=22.7
Q ss_pred hhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHH
Q 010571 413 SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 413 ~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
+.++.++..++.++..++.++..+..++..++.+..+.|.....+.+++.
T Consensus 8 e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE 57 (97)
T 2eqb_B 8 NQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVE 57 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444445555555555554444444444443333333333
No 145
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.17 E-value=2.1 Score=40.07 Aligned_cols=196 Identities=14% Similarity=0.101 Sum_probs=88.8
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCC--CcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEc
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLET--NLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t--~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~ 175 (507)
++++++.|+.+. .+.++|+.. ..+..+.. +........++.+ ++.+++.|+.+. .+.++|.
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISV---LQEHSQDVKHVIWHPSEALLASSSYDD------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEE---ECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEE---eccCCCceEEEEECCCCCEEEEEcCCC------eEEEEEC
Confidence 566667776432 377888743 23443331 1111111222333 456677776542 4778888
Q ss_pred CCCcEEEeecCCCCCCCCCCceEEEEcC--cEEEEEeCCCCCcCCCcEEEEECCC------CcEEeeeecCCCCCCCcce
Q 010571 176 ETMTWDAVEVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQT------NEWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 176 ~t~~W~~~~~~g~~p~~r~~~~~~~~~~--~~l~i~GG~~~~~~~~~i~~~d~~~------~~W~~~~~~~~~p~~r~~~ 247 (507)
.+..|..+...... ...-.++....+ ...++.|+.+ ..+.++|+.. ..|..+..... .....-.
T Consensus 183 ~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~v~ 254 (330)
T 2hes_X 183 YDDDWECVAVLNGH--EGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYMGDDEDDQQEWVCEAILPD-VHKRQVY 254 (330)
T ss_dssp ETTEEEEEEEECCC--SSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEEEECTTSCEEEEEEEECCS-CCSSCEE
T ss_pred CCCCeeEEEEccCC--CCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEecCCCccccceeEEeeeccc-ccccceE
Confidence 77777655432111 111112222223 3355666654 2355565532 23544322111 0111112
Q ss_pred EEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcC--ceEEEEEcccCCCcCCeE
Q 010571 248 AGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG--EHHLVAFGGYNGKYNNEV 325 (507)
Q Consensus 248 ~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~--~~~l~v~GG~~~~~~~~v 325 (507)
+++...+.+++.||.++ .+.+||..+..|..+..... .........+.... +..+++.||.++ .+
T Consensus 255 ~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~----~h~~~~v~~v~~~~~~~~~~las~s~Dg----~v 321 (330)
T 2hes_X 255 NVAWGFNGLIASVGADG-----VLAVYEEVDGEWKVFAKRAL----CHGVYEINVVKWLELNGKTILATGGDDG----IV 321 (330)
T ss_dssp EEEECTTSCEEEEETTS-----CEEEEEEETTEEEEEEEESC----TTTTSCEEEEEEC-----CCEEEEETTS----EE
T ss_pred EEEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEEecccc----ccccceEEEEEEecCCCceEEEEecCCC----cE
Confidence 22222445666666443 37788888888865433211 00111222222322 335677777653 45
Q ss_pred EEEECC
Q 010571 326 FVMRLK 331 (507)
Q Consensus 326 ~~~~~~ 331 (507)
..+++.
T Consensus 322 ~~W~~~ 327 (330)
T 2hes_X 322 NFWSLE 327 (330)
T ss_dssp EEEEC-
T ss_pred EEEEec
Confidence 666653
No 146
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.16 E-value=1.8 Score=41.28 Aligned_cols=201 Identities=12% Similarity=0.017 Sum_probs=97.9
Q ss_pred CceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECC-EEEEEcccCCCCCCcceEEEEECCCCcEEE
Q 010571 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGT-KLLILGGHYKKSSDSMIVRFIDLETNLCGV 131 (507)
Q Consensus 53 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~ 131 (507)
..++++|+.++.-..+..... ......+..-++ .|++... ...++.+|+.++.-..
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~----------------~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRG----------------DNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLEENV 116 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSC----------------BCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCCEEE
T ss_pred ceEEEEeCCCCceEEeeeCCC----------------CCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCccee
Confidence 469999999987766543221 111111222244 4544442 1369999999987666
Q ss_pred eecCCCCCCCcccceEEEE--CCEEEE-Ec--CcCC-------------CCCccCcEEEEEcCCCcEEEeecCCCCCCCC
Q 010571 132 METSGKVPVARGGHSVTLV--GSRLII-FG--GEDR-------------SRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 132 ~~~~g~~p~~r~~~~~~~~--~~~l~~-~G--G~~~-------------~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r 193 (507)
+. ..|........... ++..++ +- +.+. .......++.+|+.+++-..+.... ..
T Consensus 117 ~~---~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~----~~ 189 (388)
T 3pe7_A 117 VY---QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN----QW 189 (388)
T ss_dssp EE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES----SC
T ss_pred ee---echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC----cc
Confidence 54 33333222122222 232222 11 0000 0112357999999998776664211 11
Q ss_pred CCceEEEEc-CcEEEEEeCCCC-CcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcc
Q 010571 194 YDHSAALHA-NRYLIVFGGCSH-SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 194 ~~~~~~~~~-~~~l~i~GG~~~-~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~ 269 (507)
........ ++..+++..... ......++.+|+.+.....+.. .... .......+ +++.+++..........
T Consensus 190 -~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (388)
T 3pe7_A 190 -LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---HAEG-ESCTHEFWVPDGSALVYVSYLKGSPDR 264 (388)
T ss_dssp -EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---CCTT-EEEEEEEECTTSSCEEEEEEETTCCCE
T ss_pred -ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---CCCC-cccccceECCCCCEEEEEecCCCCCcc
Confidence 12333444 454444433221 1234689999998776665421 1111 11112233 45433332222221223
Q ss_pred eEEEEEcCcCeeEEeccCC
Q 010571 270 ETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 270 d~~~~d~~~~~W~~~~~~~ 288 (507)
.++++|+.+..-..+...+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMP 283 (388)
T ss_dssp EEEEECTTTCCEEEEEEEC
T ss_pred eEEEEecCCCceEEEEcCC
Confidence 5999999988776665543
No 147
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.15 E-value=2 Score=39.67 Aligned_cols=188 Identities=13% Similarity=0.025 Sum_probs=89.6
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-...-.. .......+.+ ++.+++.|+.+.
T Consensus 66 ~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~------------------h~~~v~~~~~~~~~~~l~sgs~D~--- 119 (304)
T 2ynn_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEA------------------HPDYIRSIAVHPTKPYVLSGSDDL--- 119 (304)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEEC------------------CSSCEEEEEECSSSSEEEEEETTS---
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEeC------------------CCCcEEEEEEcCCCCEEEEECCCC---
Confidence 44556666633 4588899888753221110 1111222222 455666666432
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
.+.++|..++.=..... ......-.++.+ ++.+++.|+.+ ..+.++|+.+..-......+.
T Consensus 120 ---~v~lWd~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~--- 183 (304)
T 2ynn_A 120 ---TVKLWNWENNWALEQTF----EGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQ--- 183 (304)
T ss_dssp ---CEEEEEGGGTTEEEEEE----CCCCSCEEEEEECTTCTTEEEEEETT------SEEEEEETTCSSCSEEEECCC---
T ss_pred ---eEEEEECCCCcchhhhh----cccCCcEEEEEECCCCCCEEEEEeCC------CeEEEEECCCCCccceeccCC---
Confidence 37788876652111111 111111123333 34677777754 358888886543211111111
Q ss_pred CCCCceEEEE---cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCC
Q 010571 192 PRYDHSAALH---ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNN 266 (507)
Q Consensus 192 ~r~~~~~~~~---~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~ 266 (507)
.+ ....+.+ .++.+++.|+.+ ..+.++|+.+..-...- .+ ....-..+.+ ++.+++.|+.++
T Consensus 184 ~~-~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~~~~-~~----h~~~v~~~~~~p~~~~l~s~s~Dg-- 250 (304)
T 2ynn_A 184 ER-GVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVATL-EG----HMSNVSFAVFHPTLPIIISGSEDG-- 250 (304)
T ss_dssp TT-CEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEEEEE-EC----CSSCEEEEEECSSSSEEEEEETTS--
T ss_pred cC-cEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCccceee-CC----CCCCEEEEEECCCCCEEEEEcCCC--
Confidence 11 1112222 244466666654 46888998876533211 11 1111223333 446777777544
Q ss_pred CcceEEEEEcCcCeeE
Q 010571 267 GCQETIVLNMTKLAWS 282 (507)
Q Consensus 267 ~~~d~~~~d~~~~~W~ 282 (507)
.+.++|+.+..-.
T Consensus 251 ---~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 251 ---TLKIWNSSTYKVE 263 (304)
T ss_dssp ---CEEEEETTTCCEE
T ss_pred ---eEEEEECCCCcee
Confidence 3778888776543
No 148
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.14 E-value=0.047 Score=61.37 Aligned_cols=6 Identities=33% Similarity=0.617 Sum_probs=2.4
Q ss_pred EEEEEc
Q 010571 102 KLLILG 107 (507)
Q Consensus 102 ~iyv~G 107 (507)
.|+|.|
T Consensus 171 ~i~isG 176 (1184)
T 1i84_S 171 SILCTG 176 (1184)
T ss_dssp EEECCC
T ss_pred EEEEec
Confidence 344443
No 149
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.12 E-value=2.8 Score=41.20 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=56.5
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCccc-ceEEE-EC---CEEEEEcCcCCCCCccCcEEEEE
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGG-HSVTL-VG---SRLIIFGGEDRSRKLLNDVHFLD 174 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~-~~~~~-~~---~~l~~~GG~~~~~~~~~~~~~~d 174 (507)
++..++.|+. ...++.++..+........ ..+...... .+++. -+ +.+++.|+.+ ..+.+||
T Consensus 160 ~~~~l~~~~~------~g~v~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vwd 226 (450)
T 2vdu_B 160 DDTTVIIADK------FGDVYSIDINSIPEEKFTQ-EPILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKISH 226 (450)
T ss_dssp TSSEEEEEET------TSEEEEEETTSCCCSSCCC-CCSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEeC------CCcEEEEecCCcccccccc-eeeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEEE
Confidence 5556666653 2348888887654321000 011101111 12222 25 6677777754 3588999
Q ss_pred cCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 175 LETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 175 ~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
+.+.+.......+. ...-.+++.. ++.+++.|+.+ ..+.+||+.++....
T Consensus 227 ~~~~~~~~~~~~~h---~~~v~~~~~s-d~~~l~s~~~d-----~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 227 YPQCFIVDKWLFGH---KHFVSSICCG-KDYLLLSAGGD-----DKIFAWDWKTGKNLS 276 (450)
T ss_dssp ESCTTCEEEECCCC---SSCEEEEEEC-STTEEEEEESS-----SEEEEEETTTCCEEE
T ss_pred CCCCceeeeeecCC---CCceEEEEEC-CCCEEEEEeCC-----CeEEEEECCCCcEee
Confidence 88776543321111 1111222223 44466677644 468899998876433
No 150
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=95.09 E-value=0.26 Score=37.43 Aligned_cols=24 Identities=33% Similarity=0.410 Sum_probs=9.3
Q ss_pred hHhhhhhhhhhHHHHHHHHHHHHH
Q 010571 439 QLVAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 439 ~~~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
++...+.+..+.+..+..++++++
T Consensus 31 ~~k~~e~~~~~~E~Ei~sL~kk~~ 54 (101)
T 3u1c_A 31 DKKAAEERSKQLEDDIVQLEKQLR 54 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 333333333334444444444433
No 151
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=95.06 E-value=0.21 Score=37.66 Aligned_cols=34 Identities=9% Similarity=0.230 Sum_probs=18.4
Q ss_pred HHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhc
Q 010571 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNS 424 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 424 (507)
+..|+.+....++.+.....+..++++++...+.
T Consensus 26 i~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~ 59 (110)
T 2v4h_A 26 LEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKI 59 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555555555555555555544333
No 152
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.03 E-value=3.7 Score=42.97 Aligned_cols=189 Identities=12% Similarity=0.122 Sum_probs=91.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|+.++.-...-... .....++.+ ++..++.|+.+.
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~h------------------~~~v~~~~~s~~~~~l~s~s~D~--- 494 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVGH------------------TKDVLSVAFSLDNRQIVSASRDR--- 494 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECC------------------SSCEEEEEECTTSSCEEEEETTS---
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeCC------------------CCCEEEEEEeCCCCEEEEEeCCC---
Confidence 45566666643 45888998887543221111 111122222 455666666432
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEEC--C--EEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVG--S--RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP 190 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~--~--~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p 190 (507)
.+.++|.....-..+.. .....+....++.+. + .+++.|+.+ ..+.++|+.+.+-...-. +
T Consensus 495 ---~i~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~-~--- 559 (694)
T 3dm0_A 495 ---TIKLWNTLGECKYTISE--GGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTLA-G--- 559 (694)
T ss_dssp ---CEEEECTTSCEEEEECS--STTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEEC-C---
T ss_pred ---EEEEEECCCCcceeecc--CCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEEc-C---
Confidence 37778875543222221 111112222333332 1 356666643 358899998766543321 1
Q ss_pred CCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcce
Q 010571 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d 270 (507)
....-.+++...++.+++.||.+ ..|.++|+.+..-... .......++++...+..+++++.+ ..
T Consensus 560 h~~~v~~v~~spdg~~l~sg~~D-----g~i~iwd~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~-----~~ 624 (694)
T 3dm0_A 560 HTGYVSTVAVSPDGSLCASGGKD-----GVVLLWDLAEGKKLYS-----LEANSVIHALCFSPNRYWLCAATE-----HG 624 (694)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT-----SBCEEEETTTTEEEEC-----CBCSSCEEEEEECSSSSEEEEEET-----TE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCceEEE-----ecCCCcEEEEEEcCCCcEEEEEcC-----CC
Confidence 11112233344566677777765 4588899887753321 111112223333333333444422 24
Q ss_pred EEEEEcCcCee
Q 010571 271 TIVLNMTKLAW 281 (507)
Q Consensus 271 ~~~~d~~~~~W 281 (507)
+.++|+.+..-
T Consensus 625 i~iwd~~~~~~ 635 (694)
T 3dm0_A 625 IKIWDLESKSI 635 (694)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCCC
Confidence 78888877654
No 153
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.02 E-value=2.5 Score=40.26 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=56.5
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCC--CCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCC
Q 010571 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ--TPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 151 ~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g--~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~ 228 (507)
++ +++.|+.+ ..+.+||+.+.+-...-... ..+....-.+++...++.+++.|+.++ ....+.+||+.+
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~ 267 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEF 267 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTT
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCC
Confidence 35 66666643 36999999877644332110 000011122333334555666666431 013588999887
Q ss_pred CcEEeeeecCCCCC--------CCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCee
Q 010571 229 NEWSQPEIKGDLVT--------GRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAW 281 (507)
Q Consensus 229 ~~W~~~~~~~~~p~--------~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W 281 (507)
..-...-.....+. .......+.+ ++.+++.|+.++ .+.+||+.+..-
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~ 325 (397)
T 1sq9_A 268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-----KLRFWDVKTKER 325 (397)
T ss_dssp CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEE
T ss_pred CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEcCCCce
Confidence 65332111000000 1122223333 456777776433 578899877643
No 154
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.02 E-value=3 Score=40.98 Aligned_cols=186 Identities=11% Similarity=0.049 Sum_probs=94.8
Q ss_pred EECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcC
Q 010571 98 KWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 98 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~ 176 (507)
..++.+++.|+.+. .+.+||..+..-.... ..... .-.+++.. ++..++.|+.+ ..+.+||+.
T Consensus 277 ~~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~---~~~~~-~v~~~~~~~~~~~l~sg~~d------g~i~vwd~~ 340 (464)
T 3v7d_B 277 SGHGNIVVSGSYDN------TLIVWDVAQMKCLYIL---SGHTD-RIYSTIYDHERKRCISASMD------TTIRIWDLE 340 (464)
T ss_dssp EEETTEEEEEETTS------CEEEEETTTTEEEEEE---CCCSS-CEEEEEEETTTTEEEEEETT------SCEEEEETT
T ss_pred cCCCCEEEEEeCCC------eEEEEECCCCcEEEEe---cCCCC-CEEEEEEcCCCCEEEEEeCC------CcEEEEECC
Confidence 33455666666432 4889999887543332 11111 11222222 34566666643 359999998
Q ss_pred CCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEE
Q 010571 177 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENW 256 (507)
Q Consensus 177 t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l 256 (507)
+++-...-. + .......+.+.+. .++.|+.+ ..+.+||+.+..-..... ........+...++.+
T Consensus 341 ~~~~~~~~~-~----h~~~v~~~~~~~~-~l~s~s~d-----g~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 341 NGELMYTLQ-G----HTALVGLLRLSDK-FLVSAAAD-----GSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNI 405 (464)
T ss_dssp TTEEEEEEC-C----CSSCEEEEEECSS-EEEEEETT-----SEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSE
T ss_pred CCcEEEEEe-C----CCCcEEEEEEcCC-EEEEEeCC-----CcEEEEECCCCceeeeec----CCCCccEEEEEeCCCE
Confidence 776433221 1 1122234445455 66666654 458899988765332211 1112222344557777
Q ss_pred EEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEEC
Q 010571 257 YIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 257 ~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
++.|+ + ..+.+||+.+..-......+ .......+..+ +..+++.|+.++ ..-++.+|.
T Consensus 406 l~~~~-d-----g~i~iwd~~~g~~~~~~~~~-------~~~~v~~v~~~-~~~l~~~~~~~g--~~~i~~ldf 463 (464)
T 3v7d_B 406 LVSGS-E-----NQFNIYNLRSGKLVHANILK-------DADQIWSVNFK-GKTLVAAVEKDG--QSFLEILDF 463 (464)
T ss_dssp EEEEE-T-----TEEEEEETTTCCEEESCTTT-------TCSEEEEEEEE-TTEEEEEEEETT--EEEEEEEEC
T ss_pred EEEec-C-----CeEEEEECCCCcEEehhhcc-------CCCcEEEEEec-CCEEEEEEEeCC--eEEEEEeec
Confidence 77776 2 25889999887644321111 12223333444 346666666543 234555553
No 155
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.01 E-value=2.2 Score=39.58 Aligned_cols=146 Identities=15% Similarity=0.102 Sum_probs=70.7
Q ss_pred CEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 101 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
+.+++.|+.+ ..+.+||..+....... .... ....++.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 185 ~~~~~s~~~d------~~i~i~d~~~~~~~~~~---~~h~--~~v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~ 247 (340)
T 4aow_A 185 NPIIVSCGWD------KLVKVWNLANCKLKTNH---IGHT--GYLNTVTVSPDGSLCASGGKD------GQAMLWDLNEG 247 (340)
T ss_dssp SCEEEEEETT------SCEEEEETTTTEEEEEE---CCCS--SCEEEEEECTTSSEEEEEETT------CEEEEEETTTT
T ss_pred CcEEEEEcCC------CEEEEEECCCCceeeEe---cCCC--CcEEEEEECCCCCEEEEEeCC------CeEEEEEeccC
Confidence 3455555542 23888998887654432 1111 11122233 45677777754 35888998876
Q ss_pred cEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCC----cceEEEEE--
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGR----AGHAGITI-- 252 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r----~~~~~~~~-- 252 (507)
.-...... .....+++...++ .++.++.+ ..+.+||+.+..-............. ..-.++.+
T Consensus 248 ~~~~~~~~-----~~~v~~~~~~~~~-~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 316 (340)
T 4aow_A 248 KHLYTLDG-----GDIINALCFSPNR-YWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 316 (340)
T ss_dssp EEEEEEEC-----SSCEEEEEECSSS-SEEEEEET-----TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT
T ss_pred ceeeeecC-----CceEEeeecCCCC-ceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC
Confidence 54333211 1111222333444 45555543 45888888776543211101111111 11123333
Q ss_pred CCEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 253 DENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 253 ~~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
+++.++.||.++ .+.++|++++
T Consensus 317 dg~~l~sgs~Dg-----~v~iW~~~tG 338 (340)
T 4aow_A 317 DGQTLFAGYTDN-----LVRVWQVTIG 338 (340)
T ss_dssp TSSEEEEEETTS-----CEEEEEEEC-
T ss_pred CCCEEEEEeCCC-----EEEEEeCCCc
Confidence 456777777554 3677777664
No 156
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.00 E-value=0.56 Score=44.80 Aligned_cols=200 Identities=11% Similarity=0.069 Sum_probs=85.2
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCccc-ceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGG-HSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~-~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++++++.|+......-...+++|+..+..-...... .......+ .+++.. ++.++ .++.+ ..|.++|+.+
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~s~d~~~l-~~s~d------g~v~lWd~~~ 124 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT-AGVQTEAGVTDVAWVSEKGIL-VASDS------GAVELWEILE 124 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS-EEEECSSCEEEEEEETTTEEE-EEETT------SCEEEC----
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec-ccCCCCCCEEEEEEcCCCCEE-EEECC------CEEEEeeccc
Confidence 778888877543322234688887665421100000 00001111 123333 34544 45432 2588888876
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--C-C
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--D-E 254 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~-~ 254 (507)
++-..............-.+++...++..++.|+.+ ..+.+||+.+..-...- ......-.++.+ + +
T Consensus 125 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~~~~~~-----~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 125 KESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKAVLKSY-----NAHSSEVNCVAACPGKD 194 (357)
T ss_dssp ----CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTCS
T ss_pred cceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEEE-----cCCCCCEEEEEEccCCC
Confidence 543211100000001111233334566577777765 35888999887654421 111111122333 2 3
Q ss_pred EEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEE-cCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 255 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 255 ~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
.+++.||.++ .+.++|+.+..-...... .........+.+ +.+..+++.|+.+ ..+.++|+.+
T Consensus 195 ~~~~s~~~dg-----~v~~wd~~~~~~~~~~~~------~~~~~~v~~v~~sp~~~~~la~g~~d----~~i~~wd~~~ 258 (357)
T 4g56_B 195 TIFLSCGEDG-----RILLWDTRKPKPATRIDF------CASDTIPTSVTWHPEKDDTFACGDET----GNVSLVNIKN 258 (357)
T ss_dssp SCEEEEETTS-----CEEECCTTSSSCBCBCCC------TTCCSCEEEEEECTTSTTEEEEEESS----SCEEEEESSC
T ss_pred ceeeeeccCC-----ceEEEECCCCceeeeeee------ccccccccchhhhhcccceEEEeecc----cceeEEECCC
Confidence 4677776543 367788766542211111 111112223333 3344577777754 3466677643
No 157
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=94.94 E-value=0.36 Score=39.85 Aligned_cols=74 Identities=24% Similarity=0.276 Sum_probs=39.7
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhh-------hhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHH
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRC-------FKLEAQIAELQKMLESSQ----TIENEVQILRQQKS 479 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-------~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~ 479 (507)
...+|+..+..++.....+++++..++.++++++... .+++..+.-+..++.... +.+.+..+++..+.
T Consensus 49 ~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~ 128 (168)
T 3o0z_A 49 LNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLN 128 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555566666666777777776665333 233334444444433333 34445566666666
Q ss_pred HHHHH
Q 010571 480 AFEQE 484 (507)
Q Consensus 480 ~~~~~ 484 (507)
.+|++
T Consensus 129 ~lEKe 133 (168)
T 3o0z_A 129 HSEKE 133 (168)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66665
No 158
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.93 E-value=2.2 Score=39.09 Aligned_cols=265 Identities=15% Similarity=0.109 Sum_probs=115.0
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCc-cccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcc
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSP-RYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~ 79 (507)
|+-+.++|+.+++-..+-. .... ..-.+++.. ++.+++.|+.+ ..+.++|..+++-......
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~-------- 107 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTS-------- 107 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEEC--------
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecC--------
Confidence 4445677877776654431 1111 111122222 55666777643 4588899988764333221
Q ss_pred ccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcC
Q 010571 80 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGG 159 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG 159 (507)
......+....+.+++.|+... .+..++..+.........+. ............+..++.|+
T Consensus 108 ----------h~~~~~~~~~~~~~l~s~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~s~~ 169 (318)
T 4ggc_A 108 ----------HSARVGSLSWNSYILSSGSRSG------HIHHHDVRVAEHHVATLSGH--SQEVCGLRWAPDGRHLASGG 169 (318)
T ss_dssp ----------CSSCEEEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECC--SSCEEEEEECTTSSEEEEEE
T ss_pred ----------ccceEEEeecCCCEEEEEecCC------ceEeeecCCCceeEEEEcCc--cCceEEEEEcCCCCEEEEEe
Confidence 1122233444555666655422 35555555543332221111 11111111112345556665
Q ss_pred cCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEE--cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeec
Q 010571 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 160 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
.+ ..+.++|+.+.+-..............-.+.... ....+++.+|... ..+.++|.....-.....
T Consensus 170 ~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~i~lwd~~~~~~~~~~~- 238 (318)
T 4ggc_A 170 ND------NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD----RHIRIWNVCSGACLSAVD- 238 (318)
T ss_dssp TT------SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT----CEEEEEETTTCCEEEEEE-
T ss_pred cC------cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC----CEEEEEeccccccccccc-
Confidence 43 2488888876431110000000000001111221 2343444444332 357778877765544321
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcc
Q 010571 238 GDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGG 316 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG 316 (507)
.. .......... ++.+++.+|.... .+.+||..+..- +..+.+. ......+.+..+..+++.||
T Consensus 239 --~~-~~v~~~~~~~~~~~~~~~sg~~d~----~i~iwd~~~~~~--~~~l~gH------~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 239 --AH-SQVCSILWSPHYKELISGHGFAQN----QLVIWKYPTMAK--VAELKGH------TSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp --CS-SCEEEEEEETTTTEEEEEECTTTC----CEEEEETTTCCE--EEEECCC------SSCEEEEEECTTSSCEEEEE
T ss_pred --ce-eeeeeeeecccccceEEEEEcCCC----EEEEEECCCCcE--EEEEcCC------CCCEEEEEEcCCCCEEEEEe
Confidence 11 1111112222 3445555453322 478899876542 2233221 12233344444445666777
Q ss_pred cCCCcCCeEEEEEC
Q 010571 317 YNGKYNNEVFVMRL 330 (507)
Q Consensus 317 ~~~~~~~~v~~~~~ 330 (507)
.++ .+.++|+
T Consensus 304 ~D~----~v~iWd~ 313 (318)
T 4ggc_A 304 ADE----TLRLWRC 313 (318)
T ss_dssp TTT----EEEEECC
T ss_pred cCC----eEEEEEC
Confidence 653 4555554
No 159
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.90 E-value=3.9 Score=41.79 Aligned_cols=202 Identities=11% Similarity=0.065 Sum_probs=101.0
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-C-CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecC-CCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-G-SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVT-QTPPAP 192 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~-~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~-g~~p~~ 192 (507)
...+++.|..+.....+. .++.++.-|....- + .++|+... ..|.+.++|+.+++-...-.. |..|.+
T Consensus 319 ~g~v~~vd~~~~~~~~v~---~i~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTT---EISAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp TTEEEEEETTCSSEEEEE---EEECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred CCeEEEEecCCCccceee---eeeccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 446888998877654444 23344444443332 2 34555432 256799999999876555445 555655
Q ss_pred CCCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEECCCCc-----EEeeeecCCCCCCCcceEEEEEC-CEEEEEeccCCC
Q 010571 193 RYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNE-----WSQPEIKGDLVTGRAGHAGITID-ENWYIVGGGDNN 265 (507)
Q Consensus 193 r~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~~-----W~~~~~~~~~p~~r~~~~~~~~~-~~l~v~GG~~~~ 265 (507)
-.+... ...+ +.+|+.+-.+. +.+.++|..+.. |+.+....... ....+..+.-+ ..+||---.+.+
T Consensus 390 g~g~~~-~~p~~g~v~~t~~~g~----~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 390 GRGANF-VHPTFGPVWATSHMGD----DSVALIGTDPEGHPDNAWKILDSFPALG-GGSLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCSEEEEECTTCSS
T ss_pred ccceee-ECCCCCcEEEeCCCCC----CeEEEecCCCCCCccccCEEEEEEecCC-CCCEEEEeCCCCCeEEEecCCCCC
Confidence 333222 3333 56776653321 468888877632 76654321111 11111111112 367775322211
Q ss_pred C-CcceEEEEEcCcC-------eeEEeccC--CCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 266 N-GCQETIVLNMTKL-------AWSILTSV--KGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 266 ~-~~~d~~~~d~~~~-------~W~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
. ..+.+.+||+.+. .+..++.. ... +.. ...........++..+++.-+......+.+.++|..+.+
T Consensus 464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGI-TEG-QPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTC-CSS-CCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred cccCceEEEEECCcccccccCCCcEEecccccccc-CCC-CcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 1 1346889998766 23444310 000 000 012222334444567777533222246789999987754
No 160
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.88 E-value=2.7 Score=39.82 Aligned_cols=135 Identities=14% Similarity=0.072 Sum_probs=68.4
Q ss_pred cEEEEEcCCCcEEEeecCCCCCCCCCCceEEEE--cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcc
Q 010571 169 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG 246 (507)
Q Consensus 169 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~ 246 (507)
.+.++|+.+++-...-. +. ...-.++... .++.+++.|+.+ ..+.+||+.+......- ......
T Consensus 177 ~v~lwd~~~~~~~~~~~-~h---~~~v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~~~~~~-----~~h~~~ 242 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFH-GH---GADVLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQCVQAF-----ETHESD 242 (354)
T ss_dssp EEEEEETTTCCEEEEEE-CC---SSCEEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCCEEEEE-----CCCSSC
T ss_pred cEEEEeCCCCeEEEEEc-CC---CCCeEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCcEEEEe-----cCCCCC
Confidence 58889998876543321 11 0001112221 133577777765 45889999887654421 111111
Q ss_pred eEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCe
Q 010571 247 HAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNE 324 (507)
Q Consensus 247 ~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~ 324 (507)
-.++.+ ++.+++.|+.++ .+.+||+.+..-..+-... ........+.+..+..+++.|+.+ ..
T Consensus 243 v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~~------~~~~~~~~~~~s~~g~~l~~g~~d----~~ 307 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREVAIYSKE------SIIFGASSVDFSLSGRLLFAGYND----YT 307 (354)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCT------TCCSCEEEEEECTTSSEEEEEETT----SC
T ss_pred eEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCC------CcccceeEEEEeCCCCEEEEEECC----Cc
Confidence 223333 456777777543 3778888776432211111 011122333444444566667654 45
Q ss_pred EEEEECCC
Q 010571 325 VFVMRLKP 332 (507)
Q Consensus 325 v~~~~~~~ 332 (507)
+.++|+.+
T Consensus 308 i~vwd~~~ 315 (354)
T 2pbi_B 308 INVWDVLK 315 (354)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 77888744
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.85 E-value=1.2 Score=41.63 Aligned_cols=236 Identities=12% Similarity=0.082 Sum_probs=108.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--C---CEEEEEcccCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G---TKLLILGGHYK 111 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~ 111 (507)
+..+++.|+... ....+.+||..++.......... .....++.+ + +.+++.|+.+.
T Consensus 30 ~~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 30 SAKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEK-----------------AKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp SSEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEE-----------------SSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred CceEEEecCccC--CCcEEEEEeCCCCcccceeeecc-----------------cCcEEEEEEcCCCCCCceEEEecCCC
Confidence 346666776411 12458899998887655433221 111122222 2 46666666432
Q ss_pred CCCCcceEEEEECCCCc--EEEeecCCCCCCCcccceEEE-------ECCEEEEEcCcCCCCCccCcEEEEEcCCCc--E
Q 010571 112 KSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTL-------VGSRLIIFGGEDRSRKLLNDVHFLDLETMT--W 180 (507)
Q Consensus 112 ~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~-------~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~--W 180 (507)
.+.+||..+.. -..+. ....+ -.++.. -++..++.|+.+ ..+.+||+.+.. .
T Consensus 91 ------~i~iwd~~~~~~~~~~~~---~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~ 153 (357)
T 3i2n_A 91 ------NLHIWNLEAPEMPVYSVK---GHKEI--INAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPV 153 (357)
T ss_dssp ------CEEEECTTSCSSCSEEEC---CCSSC--EEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCS
T ss_pred ------eEEEEeCCCCCccEEEEE---ecccc--eEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcc
Confidence 38888887764 12221 11111 111111 234566666653 358899987764 3
Q ss_pred EEeecCCCCCCCCCCceEE----EEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE----
Q 010571 181 DAVEVTQTPPAPRYDHSAA----LHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---- 252 (507)
Q Consensus 181 ~~~~~~g~~p~~r~~~~~~----~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---- 252 (507)
..+... .....+...+++ ...++.+++.|+.+ ..+.+||+.+..-..... .... ..++.+
T Consensus 154 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~-----~~~~-v~~~~~~~~~ 221 (357)
T 3i2n_A 154 ANMEPV-QGENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALRWETN-----IKNG-VCSLEFDRKD 221 (357)
T ss_dssp EEECCC-TTSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEE-----CSSC-EEEEEESCSS
T ss_pred eecccc-CCCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCceeeecC-----CCCc-eEEEEcCCCC
Confidence 333211 000011111222 11355567777654 468999998876533211 1111 122333
Q ss_pred -CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEE-cCceEEEEEcccCCCcCCeEEEEEC
Q 010571 253 -DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 253 -~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
++..++.|+.++ .+.+||+.+..- +..+... ....+......+.+ +++..+++.|+.++ .+.++|+
T Consensus 222 ~~~~~l~~~~~dg-----~i~i~d~~~~~~--~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~iwd~ 289 (357)
T 3i2n_A 222 ISMNKLVATSLEG-----KFHVFDMRTQHP--TKGFASV-SEKAHKSTVWQVRHLPQNRELFLTAGGAG----GLHLWKY 289 (357)
T ss_dssp SSCCEEEEEESTT-----EEEEEEEEEEET--TTEEEEE-EEECCSSCEEEEEEETTEEEEEEEEETTS----EEEEEEE
T ss_pred CCCCEEEEECCCC-----eEEEEeCcCCCc--ccceeee-ccCCCcCCEEEEEECCCCCcEEEEEeCCC----cEEEeec
Confidence 456777776443 467777655321 1100000 00011122233333 44444777787653 5666676
Q ss_pred CC
Q 010571 331 KP 332 (507)
Q Consensus 331 ~~ 332 (507)
..
T Consensus 290 ~~ 291 (357)
T 3i2n_A 290 EY 291 (357)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 162
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.85 E-value=2.9 Score=40.02 Aligned_cols=184 Identities=11% Similarity=0.109 Sum_probs=89.8
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCccc-ceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCC--cEEEeecCCCCCC
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGG-HSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETM--TWDAVEVTQTPPA 191 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~-~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~--~W~~~~~~g~~p~ 191 (507)
.+.+||+.++.-...... ..+..... ...+.+ ++.+++.|+.+. .+.++|+... .-..+. + .
T Consensus 181 ~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~--~---h 248 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGS-EFPSGHTADVLSLSINSLNANMFISGSCDT------TVRLWDLRITSRAVRTYH--G---H 248 (380)
T ss_dssp CEEEECTTTCCEEEEECC-CSSSSCCSCEEEEEECSSSCCEEEEEETTS------CEEEEETTTTCCCCEEEC--C---C
T ss_pred cEEEEEcCCCcEEEEeec-ccCCCCccCeEEEEeecCCCCEEEEEECCC------eEEEEECCCCCcceEEEC--C---c
Confidence 488899988865443211 12222111 122223 457888887643 5888888632 122221 1 1
Q ss_pred CCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCC--CCCcceEEEEE--CCEEEEEeccCCCCC
Q 010571 192 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV--TGRAGHAGITI--DENWYIVGGGDNNNG 267 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p--~~r~~~~~~~~--~~~l~v~GG~~~~~~ 267 (507)
...-.+++...++..++.|+.+ ..+.+||+.++.-...-...... .......++.+ ++.+++.|+.++
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--- 320 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--- 320 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS---
T ss_pred CCCeEEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC---
Confidence 1112234444566677777765 35889999887544321111100 00111122333 567777776443
Q ss_pred cceEEEEEcCcCeeEE-eccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 268 CQETIVLNMTKLAWSI-LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 268 ~~d~~~~d~~~~~W~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
.+.++|..+..-.. +..+.. ...+ ....+.+..+..+++.||.++ .+.++++..
T Consensus 321 --~i~vwd~~~~~~~~~~~~~~~----~h~~-~v~~l~~s~dg~~l~sgs~D~----~i~iW~~~~ 375 (380)
T 3iz6_a 321 --DCYVWDTLLAEMVLNLGTLQN----SHEG-RISCLGLSSDGSALCTGSWDK----NLKIWAFSG 375 (380)
T ss_dssp --CEEEEETTTCCEEEEECCSCS----SCCC-CCCEEEECSSSSEEEEECTTS----CEEEEECCS
T ss_pred --CEEEEECCCCceEEEEecccC----CCCC-ceEEEEECCCCCEEEEeeCCC----CEEEEecCC
Confidence 47889987654332 221111 1111 122333433445667777653 455666543
No 163
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.84 E-value=2.6 Score=42.82 Aligned_cols=201 Identities=10% Similarity=0.034 Sum_probs=93.2
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CC-EEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r 193 (507)
...++++|..+..-..+. ..+.++.-+..+.- ++ ++|+.+.. .+.+.++|+.+++-...-..+..|.+-
T Consensus 301 ~g~i~vvd~~~~~~l~~~---~i~~~~~~~~~~~spdg~~l~va~~~------~~~v~v~D~~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVT---SIGAAPFLHDGGWDSSHRYFMTAANN------SNKVAVIDSKDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp TTEEEEEECTTSSSCEEE---EEECCSSCCCEEECTTSCEEEEEEGG------GTEEEEEETTTTEEEEEEECSSSBCCT
T ss_pred CCeEEEEEecCCCcceeE---EeccCcCccCceECCCCCEEEEEecC------CCeEEEEECCCCeEEEeeccCCCCCCC
Confidence 346899998775422211 11112222222222 33 45554322 456899999998866654444445443
Q ss_pred CCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEECCCC-----cEEeeeecCCCCCCCcceEEEEECC-EEEEEeccCCCC
Q 010571 194 YDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTN-----EWSQPEIKGDLVTGRAGHAGITIDE-NWYIVGGGDNNN 266 (507)
Q Consensus 194 ~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~-----~W~~~~~~~~~p~~r~~~~~~~~~~-~l~v~GG~~~~~ 266 (507)
.+... ...+ +.+|+.+..+. +.|.++|..+. .|+.+..... +.....+..+.-++ .||+-.-.+.+.
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~~-~g~~~~~v~~~pdg~~l~v~~~~~~~~ 445 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQG-QGGGSLFIKTHPKSSHLYVDTTFNPDA 445 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEEC-SCSCCCCEECCTTCCEEEECCTTCSSH
T ss_pred CCccc-CCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEEc-CCCCceEEEcCCCCCcEEEecCCCCCc
Confidence 22222 2333 66777765332 46888888762 2655433111 11111111111233 455432111110
Q ss_pred -CcceEEEEEcCcCeeE--EeccC--CCCCCCCCCCCceEEE-EEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 267 -GCQETIVLNMTKLAWS--ILTSV--KGRNPLASEGLSVCSA-IIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 267 -~~~d~~~~d~~~~~W~--~~~~~--~~~~p~~~~~~~~~~~-~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
....+.+||+.+..-. .++.- .+. + ..+.....+ ..+++..|++.-+......+.+.++|..+.+
T Consensus 446 ~~~~~v~v~d~~~~~~~~~~~~v~~~~~~-~--~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 446 RISQSVAVFDLKNLDAKYQVLPIAEWADL-G--EGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp HHHTCEEEEETTCTTSCCEEECHHHHHCC-C--SSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ccCceEEEEECCCCCCCeEEeechhhccc-C--CCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 1346899999877532 22110 000 0 112222233 3344456665422111235788899987764
No 164
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=94.84 E-value=0.27 Score=48.11 Aligned_cols=98 Identities=9% Similarity=0.073 Sum_probs=42.1
Q ss_pred hhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHH--HHHhHHH
Q 010571 389 TDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQK--MLESSQT 466 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~--~~~~~~~ 466 (507)
+++..++...++++..+.+.........+.++.++..+++.++++......+.+..+++++++..+.+... .-..++.
T Consensus 93 k~q~~V~~~LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~~~~i~~~~~~~~~~~i~~ 172 (464)
T 1m1j_B 93 KQEKTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELHYNYIKDNLDNNIPSSLRV 172 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HhhhhhHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 33333444444444444433333333333444444444444444444444343333333333333332221 1122334
Q ss_pred HHHHHHHHHHhHHHHHHHHH
Q 010571 467 IENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 467 ~e~e~~~~~~~~~~~~~~~~ 486 (507)
|+..++.+.++++.|+..+.
T Consensus 173 L~~~~~~l~~ki~~l~~~~~ 192 (464)
T 1m1j_B 173 LRAVIDSLHKKIQKLENAIA 192 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45555566666666555544
No 165
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.83 E-value=2.2 Score=45.40 Aligned_cols=109 Identities=13% Similarity=0.018 Sum_probs=62.0
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++.|+++||... -+.+||+.++++...... ..+. .....+... ++.|++- .. +.+.+||+.+
T Consensus 482 ~g~lWi~~~t~~------Gl~~~d~~~~~~~~~~~~-~~~~-~~~~~~i~~d~~g~lWig-t~-------~Gl~~~~~~~ 545 (758)
T 3ott_A 482 EGNVWVLLYNNK------GIDKINPRTREVTKLFAD-ELTG-EKSPNYLLCDEDGLLWVG-FH-------GGVMRINPKD 545 (758)
T ss_dssp TSCEEEEETTCS------SEEEEETTTTEEEEECTT-TSCG-GGCEEEEEECTTSCEEEE-ET-------TEEEEECC--
T ss_pred CCCEEEEccCCC------CcEEEeCCCCceEEecCC-CcCC-CcccceEEECCCCCEEEE-ec-------CceEEEecCC
Confidence 577888666432 288999999999887421 1111 111222333 3577753 21 2489999988
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
.++..... ..+|. ...++++. .++.|++... +-+.+||+.+......
T Consensus 546 ~~~~~~~~-~gl~~-~~i~~i~~-~~g~lWi~t~-------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 546 ESQQSISF-GSFSN-NEILSMTC-VKNSIWVSTT-------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp CCCCBCCC-CC----CCEEEEEE-ETTEEEEEES-------SCEEEEETTTCCEEEC
T ss_pred CceEEecc-cCCCc-cceEEEEE-CCCCEEEECC-------CCeEEEcCCCceeEEe
Confidence 87765532 22332 22233333 4677887553 4589999999887753
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.83 E-value=1.4 Score=41.10 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=33.3
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeE
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSN 67 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~ 67 (507)
+..++++|+.+.+...... .+.....+.++.. ++.+|+.+.. ...+++||+.++....
T Consensus 20 ~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TTEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEE
Confidence 3457889998876653321 1210012334433 4467777642 2469999999886543
No 167
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.80 E-value=1.5 Score=41.22 Aligned_cols=106 Identities=17% Similarity=0.108 Sum_probs=57.7
Q ss_pred CEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 101 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
+.+++.|+.+ ..+.+||+.++.-..... .......++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKD------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeec
Confidence 5677777753 248899988775433221 11111222223 45677777653 3599999988
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
.+-...-.. .......-.+++...++..++.|+.+ ..+.+||+.+.
T Consensus 148 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 193 (366)
T 3k26_A 148 DTLVAIFGG-VEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSK 193 (366)
T ss_dssp TEEEEEECS-TTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSH
T ss_pred CeEEEEecc-cccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCC
Confidence 765443210 01111222233333455567777754 46888988764
No 168
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=94.79 E-value=0.36 Score=36.69 Aligned_cols=17 Identities=29% Similarity=0.303 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHhHHHHH
Q 010571 466 TIENEVQILRQQKSAFE 482 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~ 482 (507)
+.+.+..-|.++++-+|
T Consensus 83 ~AE~evasLnRriqllE 99 (101)
T 3u59_A 83 DAEAEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 45556666666666554
No 169
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=94.73 E-value=0.74 Score=35.20 Aligned_cols=67 Identities=16% Similarity=0.200 Sum_probs=46.2
Q ss_pred cchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010571 425 THSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 425 ~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
....+++++...+...+.++.++.++|+.--.+++..+... .++.+..+.-++..-|+.|+++-..+
T Consensus 36 ~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~EKe~L 106 (111)
T 2v66_B 36 QVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESL 106 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666677777777777777777777776655544 67777777777777888887754433
No 170
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.67 E-value=6.8 Score=44.11 Aligned_cols=191 Identities=11% Similarity=0.095 Sum_probs=93.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE----CCEEEEEcccCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW----GTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.++|..++.....-.. ......++.+ ++.+++.|+.+
T Consensus 668 ~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~~~l~sg~~d-- 722 (1249)
T 3sfz_A 668 DDSYIATCSAD-----KKVKIWDSATGKLVHTYDE------------------HSEQVNCCHFTNKSNHLLLATGSND-- 722 (1249)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEEC------------------CSSCEEEEEECSSSSCCEEEEEETT--
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCceEEEEcC------------------CCCcEEEEEEecCCCceEEEEEeCC--
Confidence 45566666632 4588999988764332211 1112223333 23355555532
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCC-
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP- 189 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~- 189 (507)
..+.+||..++....... . ......++.+ ++..++.|+.+ ..+..+|+.+..-.........
T Consensus 723 ----~~v~vwd~~~~~~~~~~~---~--h~~~v~~~~~sp~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~~~~~ 787 (1249)
T 3sfz_A 723 ----FFLKLWDLNQKECRNTMF---G--HTNSVNHCRFSPDDELLASCSAD------GTLRLWDVRSANERKSINVKRFF 787 (1249)
T ss_dssp ----SCEEEEETTSSSEEEEEC---C--CSSCEEEEEECSSTTEEEEEESS------SEEEEEEGGGTEEEEEEECCCCC
T ss_pred ----CeEEEEECCCcchhheec---C--CCCCEEEEEEecCCCEEEEEECC------CeEEEEeCCCCcccceecccccc
Confidence 238889998886544321 1 1111122222 44566666643 3588888876643322111000
Q ss_pred -----C---CCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEec
Q 010571 190 -----P---APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGG 261 (507)
Q Consensus 190 -----p---~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG 261 (507)
+ ......+++...++..+++++. +.+.+||+.+.........+. ..........-++.++++|+
T Consensus 788 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~ 859 (1249)
T 3sfz_A 788 LSSEDPPEDVEVIVKCCSWSADGDKIIVAAK------NKVLLFDIHTSGLLAEIHTGH--HSTIQYCDFSPYDHLAVIAL 859 (1249)
T ss_dssp --------CCCCCBCCCCBCTTSSEEEEEET------TEEEEEETTTCCEEEEEECSS--SSCCCEEEECSSTTEEEEEC
T ss_pred cccCCccccccceEEEEEECCCCCEEEEEcC------CcEEEEEecCCCceeEEcCCC--CCceEEEEEcCCCCEEEEEe
Confidence 0 0011112223344545555542 578999998877554321111 11111122222567777776
Q ss_pred cCCCCCcceEEEEEcCcCe
Q 010571 262 GDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 262 ~~~~~~~~d~~~~d~~~~~ 280 (507)
.++ .+.++|..+..
T Consensus 860 ~dg-----~v~vwd~~~~~ 873 (1249)
T 3sfz_A 860 SQY-----CVELWNIDSRL 873 (1249)
T ss_dssp SSS-----CEEEEETTTTE
T ss_pred CCC-----eEEEEEcCCCc
Confidence 543 37788887654
No 171
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.63 E-value=2.5 Score=38.34 Aligned_cols=224 Identities=10% Similarity=0.003 Sum_probs=116.6
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 115 (507)
++.||+.... ...+.+||+. +....+..... ...-++++.. ++.||+....
T Consensus 30 ~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~----------------~~~~~~i~~~~~g~l~v~~~~------ 81 (300)
T 2qc5_A 30 DGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTP----------------DAKVMCLIVSSLGDIWFTENG------ 81 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSST----------------TCCEEEEEECTTSCEEEEETT------
T ss_pred CCCEEEEcCC-----CCeEEEECCC-CceEEEECCCC----------------CCcceeEEECCCCCEEEEecC------
Confidence 5678886531 3568899988 77665442110 1112233332 5678886431
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r 193 (507)
...+..||+. +++..... |........+.+ ++.+|+.... .+.+..||+. ++........ ...
T Consensus 82 ~~~v~~~d~~-g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~~~---~~~ 146 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPL----PQPDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYDLPN---KGS 146 (300)
T ss_dssp TTEEEEECTT-SCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEECSS---TTC
T ss_pred CCeEEEECCC-CCeEEecC----CCCCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEccCCC---CCC
Confidence 2358999988 77765542 211122223333 4678776432 2368999987 6666543211 112
Q ss_pred CCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceE
Q 010571 194 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 194 ~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~ 271 (507)
.-+.++...++.+|+..... +.+++||+ ++....+.. +........+.+ ++.+|+.... ...+
T Consensus 147 ~~~~i~~d~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i 211 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQN-----NSIGRITN-TGKLEEYPL----PTNAAAPVGITSGNDGALWFVEIM-----GNKI 211 (300)
T ss_dssp CEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEETT-----TTEE
T ss_pred CceeEEECCCCCEEEEecCC-----CeEEEECC-CCcEEEeeC----CCCCCCcceEEECCCCCEEEEccC-----CCEE
Confidence 22334444556677755321 46899998 666665422 111122233334 4578776431 1258
Q ss_pred EEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEEC
Q 010571 272 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 272 ~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
++||+ +..+..+..... ......+.++.++.|++.... .+.+..|++
T Consensus 212 ~~~~~-~g~~~~~~~~~~-------~~~~~~i~~d~~g~l~v~~~~----~~~i~~~~~ 258 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTP-------NARPHAITAGKNSEIWFTEWG----ANQIGRITN 258 (300)
T ss_dssp EEECT-TCCEEEEECSST-------TCCEEEEEECSTTCEEEEETT----TTEEEEECT
T ss_pred EEEcC-CCcEEEEECCCC-------CCCceEEEECCCCCEEEeccC----CCeEEEECC
Confidence 88988 555554422110 112333445444457765421 356777777
No 172
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=94.54 E-value=0.31 Score=49.09 Aligned_cols=13 Identities=38% Similarity=0.580 Sum_probs=6.0
Q ss_pred cEEEEEcCCCcEE
Q 010571 169 DVHFLDLETMTWD 181 (507)
Q Consensus 169 ~~~~~d~~t~~W~ 181 (507)
.+..+|+..+...
T Consensus 145 ~L~~L~Ls~N~l~ 157 (487)
T 3oja_A 145 RVQYLDLKLNEID 157 (487)
T ss_dssp SEEEEECTTSCCC
T ss_pred CCCEEECCCCCCC
Confidence 3455555444433
No 173
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.49 E-value=1.6 Score=42.06 Aligned_cols=202 Identities=9% Similarity=0.001 Sum_probs=96.2
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecC--CCCCCCcccceEEEE--CC-EEEEEcCcCCCCCccCcEEEEE
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS--GKVPVARGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLD 174 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~--g~~p~~r~~~~~~~~--~~-~l~~~GG~~~~~~~~~~~~~~d 174 (507)
++.+++.|+.+ ..+.+||..++........ ..+........++.+ ++ .+++.|+.+ ..+.++|
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWD 160 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEE
Confidence 56677777643 2488888887643110000 000001111122223 22 467777653 3599999
Q ss_pred cCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECC
Q 010571 175 LETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDE 254 (507)
Q Consensus 175 ~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~ 254 (507)
+.+.+....-. .......-.+++...++.+++.|+.+ ..+.+||+.+..-...-..+ ....+....+..-++
T Consensus 161 ~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 161 VGTGAAVLTLG--PDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRP-HEGTRPVHAVFVSEG 232 (402)
T ss_dssp TTTTEEEEEEC--TTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECS-SCSSSCCEEEECSTT
T ss_pred CCCCCccEEEe--cCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccC-CCCCcceEEEEcCCC
Confidence 98876544321 01111222233444455567777654 46899999887644321001 111112222222356
Q ss_pred EEEEEeccCCCCCcceEEEEEcCcCee-EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 255 NWYIVGGGDNNNGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 255 ~l~v~GG~~~~~~~~d~~~~d~~~~~W-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
.+++.|.... .-..+.+||+.+..- ..+..+.. .....+....+++..|++.|+.+ ..+.+|++...
T Consensus 233 ~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~g~~d----g~i~i~d~~~~ 300 (402)
T 2aq5_A 233 KILTTGFSRM--SERQVALWDTKHLEEPLSLQELDT------SSGVLLPFFDPDTNIVYLCGKGD----SSIRYFEITSE 300 (402)
T ss_dssp EEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCC------CSSCEEEEEETTTTEEEEEETTC----SCEEEEEECSS
T ss_pred cEEEEeccCC--CCceEEEEcCccccCCceEEeccC------CCceeEEEEcCCCCEEEEEEcCC----CeEEEEEecCC
Confidence 7777662111 123688899876431 01111111 11123333445556777777544 35666776543
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.44 E-value=3.1 Score=38.64 Aligned_cols=250 Identities=12% Similarity=0.032 Sum_probs=119.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEE-ECCEEEEEcccCCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 115 (507)
++.||+.+.. ...+++||+.++....+.... ...-++++. -++++|+....... .
T Consensus 55 ~g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~-----------------~~~~~~i~~~~dg~l~v~~~~~~~--~ 110 (333)
T 2dg1_A 55 QGQLFLLDVF-----EGNIFKINPETKEIKRPFVSH-----------------KANPAAIKIHKDGRLFVCYLGDFK--S 110 (333)
T ss_dssp TSCEEEEETT-----TCEEEEECTTTCCEEEEEECS-----------------SSSEEEEEECTTSCEEEEECTTSS--S
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCcEEEEeeCC-----------------CCCcceEEECCCCcEEEEeCCCCC--C
Confidence 5668777652 246899999998877654211 111223332 25778876532211 1
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r 193 (507)
...+++||+.++....+.. ..... .....+.+ ++.+|+.............++.||+.+.+...+... . .
T Consensus 111 ~~~i~~~d~~~~~~~~~~~--~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~---~ 182 (333)
T 2dg1_A 111 TGGIFAATENGDNLQDIIE--DLSTA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--I---S 182 (333)
T ss_dssp CCEEEEECTTSCSCEEEEC--SSSSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--E---S
T ss_pred CceEEEEeCCCCEEEEEEc--cCccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--C---C
Confidence 2469999999887664321 11111 11222233 457777543221111235699999887777655321 1 1
Q ss_pred CCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECCC--CcEEeeee--cCCCCCCCcceEEEEE--CCEEEEEeccCCCC
Q 010571 194 YDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQT--NEWSQPEI--KGDLVTGRAGHAGITI--DENWYIVGGGDNNN 266 (507)
Q Consensus 194 ~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~~--~~W~~~~~--~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~ 266 (507)
....++...++ .+|+.... .+.+++||+.+ .....+.. ....+.. .....+.+ ++++|+....+
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~-----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~--- 253 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETT-----ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQ--- 253 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGG-----GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETT---
T ss_pred cccceEECCCCCEEEEEeCC-----CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCC---
Confidence 11233333444 57775432 25689999854 23332110 0001111 12222333 46777764321
Q ss_pred CcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCC-CcCCeEEEEECC
Q 010571 267 GCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG-KYNNEVFVMRLK 331 (507)
Q Consensus 267 ~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~v~~~~~~ 331 (507)
..+.+||++...-..+.. +.. ...........+..++...||+.+...+ .....+|.+++.
T Consensus 254 --~~v~~~d~~g~~~~~~~~-~~~-~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 254 --GRVLVFNKRGYPIGQILI-PGR-DEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp --TEEEEECTTSCEEEEEEC-TTG-GGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred --CEEEEECCCCCEEEEEEc-CCC-ccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 258889986554444322 110 0000001122222234356776543221 123467888864
No 175
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=94.42 E-value=0.73 Score=36.81 Aligned_cols=16 Identities=25% Similarity=0.252 Sum_probs=6.5
Q ss_pred HHHHHHhHHHHHHHHH
Q 010571 471 VQILRQQKSAFEQEME 486 (507)
Q Consensus 471 ~~~~~~~~~~~~~~~~ 486 (507)
...+...+..++++..
T Consensus 99 ~~~L~~~kkkle~e~~ 114 (129)
T 2fxo_A 99 NAELTAKKRKLEDECS 114 (129)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333334444444443
No 176
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=94.40 E-value=0.8 Score=37.78 Aligned_cols=67 Identities=13% Similarity=0.092 Sum_probs=28.2
Q ss_pred hHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHH
Q 010571 394 IKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKM 460 (507)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~ 460 (507)
|+....++...+........++++...++.......+....+.++.+..++.....+++++..++.+
T Consensus 11 LekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~ 77 (168)
T 3o0z_A 11 LQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAI 77 (168)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444455444444444444433333333333333333333344444333333
No 177
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.39 E-value=3 Score=38.22 Aligned_cols=106 Identities=11% Similarity=0.087 Sum_probs=52.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE----CCEEEEEcccCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW----GTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.+||+.+.....+..... .......+.+ ++.+++.|+.+
T Consensus 20 ~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~g----------------H~~~V~~v~~s~~~~g~~l~s~s~D-- 76 (297)
T 2pm7_B 20 YGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTG----------------HEGPVWRVDWAHPKFGTILASCSYD-- 76 (297)
T ss_dssp TSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECC----------------CSSCEEEEEECCGGGCSEEEEEETT--
T ss_pred CCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEcc----------------ccCCeEEEEecCCCcCCEEEEEcCC--
Confidence 45666677643 457888886544333322211 1111222332 25667777643
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEEC----CEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVG----SRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~----~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
..+.++|+.++.|..+.. .........++.+. +.+++.|+.+ ..+.++|+.+.
T Consensus 77 ----~~v~iWd~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~ 133 (297)
T 2pm7_B 77 ----GKVMIWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKEN 133 (297)
T ss_dssp ----TEEEEEEBSSSCBCCCEE---ECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSS
T ss_pred ----CEEEEEEcCCCceEEEEE---eecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCC
Confidence 248888888876654431 11111112223331 4566666653 35777777654
No 178
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.39 E-value=4.2 Score=39.86 Aligned_cols=160 Identities=8% Similarity=-0.018 Sum_probs=78.8
Q ss_pred CEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcE
Q 010571 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTW 180 (507)
Q Consensus 101 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W 180 (507)
+.+++.|+.+ ..+.+||+.++........+ ........+.. ++.+++.|+.+ ..+.+||+.+++.
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~s-d~~~l~s~~~d------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFG--HKHFVSSICCG-KDYLLLSAGGD------DKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCC--CSSCEEEEEEC-STTEEEEEESS------SEEEEEETTTCCE
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecC--CCCceEEEEEC-CCCEEEEEeCC------CeEEEEECCCCcE
Confidence 7788887753 24888888877544331111 11111111222 56666777643 3689999988775
Q ss_pred EEeecCCC----------C-----------CCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEEC--CC-CcEEeeee
Q 010571 181 DAVEVTQT----------P-----------PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDL--QT-NEWSQPEI 236 (507)
Q Consensus 181 ~~~~~~g~----------~-----------p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~--~~-~~W~~~~~ 236 (507)
...-..+. . +.......++...++.++++++... +.+.+|++ .+ ..+..+..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d----~~i~iw~~~~~~~~~l~~~~~ 350 (450)
T 2vdu_B 275 LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT----KCIIILEMSEKQKGDLALKQI 350 (450)
T ss_dssp EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC----SEEEEEEECSSSTTCEEEEEE
T ss_pred eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC----CeEEEEEeccCCCCceeeccE
Confidence 43321110 0 0011111223333443444444221 56888888 33 34444322
Q ss_pred cCCCCCCCcceEEEEECCEEEEEeccCCC----CCcceEEEEEcCcCeeE
Q 010571 237 KGDLVTGRAGHAGITIDENWYIVGGGDNN----NGCQETIVLNMTKLAWS 282 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~----~~~~d~~~~d~~~~~W~ 282 (507)
. +......+++...+.+++..+.... ...-.+|.++..++.|.
T Consensus 351 ~---~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 351 I---TFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp E---ECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred e---ccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 1 1111222344445677776654321 22336777888877775
No 179
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.39 E-value=3.6 Score=39.51 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=58.2
Q ss_pred EEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCc
Q 010571 102 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 102 ~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~ 179 (507)
.+++.|+.+. .+.+||..++.....-. .........++.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 145 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~ 209 (402)
T 2aq5_A 145 NVLLSAGCDN------VILVWDVGTGAAVLTLG---PDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGT 209 (402)
T ss_dssp TEEEEEETTS------CEEEEETTTTEEEEEEC---TTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTE
T ss_pred CEEEEEcCCC------EEEEEECCCCCccEEEe---cCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCc
Confidence 5777776432 38899999886543320 0111111222333 45666666643 369999998876
Q ss_pred EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 180 W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
-...-..+. .......++...++.+++.|... ..-..+.+||+.+..
T Consensus 210 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~~--~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 210 VVAEKDRPH--EGTRPVHAVFVSEGKILTTGFSR--MSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEEECSS--CSSSCCEEEECSTTEEEEEEECT--TCCEEEEEEETTBCS
T ss_pred eeeeeccCC--CCCcceEEEEcCCCcEEEEeccC--CCCceEEEEcCcccc
Confidence 443321111 11112344555677677776211 012568899987643
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.34 E-value=3.4 Score=38.63 Aligned_cols=236 Identities=12% Similarity=-0.006 Sum_probs=118.8
Q ss_pred CceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEE-ECCEEEEEcccCCCCCCcceEEEEECCCC--cE
Q 010571 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETN--LC 129 (507)
Q Consensus 53 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~--~W 129 (507)
+.++++|+.+++......... -..-+.++. -+++||+.... ...+.+||+... .-
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~----------------~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~ 126 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNL----------------FYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPL 126 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTT----------------CSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCS
T ss_pred CcEEEEECCCCeEEeccCCCc----------------cCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEE
Confidence 369999998887644322110 011122222 25778887642 345899998765 22
Q ss_pred EEeecC---CCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCC----CCCCC-CceE
Q 010571 130 GVMETS---GKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP----PAPRY-DHSA 198 (507)
Q Consensus 130 ~~~~~~---g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~----p~~r~-~~~~ 198 (507)
..+... |..+........+++ ++.||+..+.. .+.|.+||.....-..+...+.. +.... -+.+
T Consensus 127 ~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gi 201 (329)
T 3fvz_A 127 LILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSL 201 (329)
T ss_dssp EEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEE
T ss_pred EEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEE
Confidence 333211 111111222333344 46899987531 34689999654433333222211 11111 2334
Q ss_pred EEEcC-cEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCC--CCCcceEEEEE
Q 010571 199 ALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN--NNGCQETIVLN 275 (507)
Q Consensus 199 ~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~--~~~~~d~~~~d 275 (507)
++..+ +.||+....+ +.|.+||+.++.....-. .........+.+...+.+++..|... +.....+.++|
T Consensus 202 a~d~~~g~l~v~d~~~-----~~I~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~ 274 (329)
T 3fvz_A 202 ALVPHLDQLCVADREN-----GRIQCFKTDTKEFVREIK--HASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMN 274 (329)
T ss_dssp EEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEC--CTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEE
T ss_pred EEECCCCEEEEEECCC-----CEEEEEECCCCcEEEEEe--ccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEE
Confidence 44445 7788876543 579999998776654311 11111112233333466666666321 12234688999
Q ss_pred cCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 276 MTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 276 ~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
+.+......-... .........+.++.+..|||.... .+.|+.|++.
T Consensus 275 ~~~g~~~~~~~~~-----~~~~~~p~~ia~~~dG~lyvad~~----~~~I~~~~~~ 321 (329)
T 3fvz_A 275 FSSGEIIDVFKPV-----RKHFDMPHDIVASEDGTVYIGDAH----TNTVWKFTLT 321 (329)
T ss_dssp TTTCCEEEEECCS-----SSCCSSEEEEEECTTSEEEEEESS----SCCEEEEEEE
T ss_pred cCCCeEEEEEcCC-----CCccCCeeEEEECCCCCEEEEECC----CCEEEEEeCC
Confidence 8877655431110 011112333445555578887653 3578888874
No 181
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.32 E-value=3.4 Score=38.57 Aligned_cols=191 Identities=9% Similarity=0.063 Sum_probs=91.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeE---EECCEEEEEcccCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMV---KWGTKLLILGGHYKKS 113 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~---~~~~~iyv~GG~~~~~ 113 (507)
++.+++.|+.+ ..+.+||..++....+.... .. -.+++ ..++.+++.|+.+
T Consensus 97 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~-----------------~~-v~~~~~~~~~~~~~l~~~~~d--- 150 (368)
T 3mmy_A 97 DGSKVFTASCD-----KTAKMWDLSSNQAIQIAQHD-----------------AP-VKTIHWIKAPNYSCVMTGSWD--- 150 (368)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECS-----------------SC-EEEEEEEECSSCEEEEEEETT---
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCceeecccc-----------------Cc-eEEEEEEeCCCCCEEEEccCC---
Confidence 45555666533 46889999988765543221 11 11222 2256777777653
Q ss_pred CCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCC
Q 010571 114 SDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 114 ~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r 193 (507)
..+.+||+.++.-.... .......+.....+.+++.++ .+.+..||+....-...... .+...
T Consensus 151 ---g~i~vwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~--~~~~~ 213 (368)
T 3mmy_A 151 ---KTLKFWDTRSSNPMMVL-----QLPERCYCADVIYPMAVVATA-------ERGLIVYQLENQPSEFRRIE--SPLKH 213 (368)
T ss_dssp ---SEEEEECSSCSSCSEEE-----ECSSCEEEEEEETTEEEEEEG-------GGCEEEEECSSSCEEEEECC--CSCSS
T ss_pred ---CcEEEEECCCCcEEEEE-----ecCCCceEEEecCCeeEEEeC-------CCcEEEEEeccccchhhhcc--ccccC
Confidence 34888998776432221 111122333444555554433 23588888876543222211 11111
Q ss_pred CCceEEEEcC----cEEEEEeCCCCCcCCCcEEEEECCCCc-------EEeeeecCCCCCCCc----ceEEEEE--CCEE
Q 010571 194 YDHSAALHAN----RYLIVFGGCSHSIFFNDLHVLDLQTNE-------WSQPEIKGDLVTGRA----GHAGITI--DENW 256 (507)
Q Consensus 194 ~~~~~~~~~~----~~l~i~GG~~~~~~~~~i~~~d~~~~~-------W~~~~~~~~~p~~r~----~~~~~~~--~~~l 256 (507)
.........+ ...++.|+.+ ..+.+||+.... +..... ........ ...++.+ ++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~ 287 (368)
T 3mmy_A 214 QHRCVAIFKDKQNKPTGFALGSIE-----GRVAIHYINPPNPAKDNFTFKCHRS-NGTNTSAPQDIYAVNGIAFHPVHGT 287 (368)
T ss_dssp CEEEEEEEECTTSCEEEEEEEETT-----SEEEEEESSCSCHHHHSEEEECSEE-C----CCCEEECCEEEEEECTTTCC
T ss_pred CCceEEEcccCCCCCCeEEEecCC-----CcEEEEecCCCCccccceeeeeeec-ccccccccccccceEEEEEecCCCE
Confidence 1122222211 1236666654 457788876652 111100 00000001 1223333 4567
Q ss_pred EEEeccCCCCCcceEEEEEcCcCee
Q 010571 257 YIVGGGDNNNGCQETIVLNMTKLAW 281 (507)
Q Consensus 257 ~v~GG~~~~~~~~d~~~~d~~~~~W 281 (507)
++.|+.++ .+.+||+.+..-
T Consensus 288 l~s~~~dg-----~i~iwd~~~~~~ 307 (368)
T 3mmy_A 288 LATVGSDG-----RFSFWDKDARTK 307 (368)
T ss_dssp EEEEETTS-----CEEEEETTTTEE
T ss_pred EEEEccCC-----eEEEEECCCCcE
Confidence 77777543 378999887643
No 182
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.29 E-value=5.4 Score=40.77 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=60.2
Q ss_pred CCCeEeeC-C--CCCeEEeccCCCCCC--c---cccceEEEECCEEEEEcCCCCCccCCceEEEECCCC--ceeEeeecc
Q 010571 3 SGSWHLEL-P--YDLWVTLPVSGARPS--P---RYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSL--AWSNLRLET 72 (507)
Q Consensus 3 ~~~~~~d~-~--~~~W~~~~~~~~~p~--~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~--~W~~~~~~~ 72 (507)
..+++||. . ...|+.-........ + ....+.++.++.||+... ...++.+|..|+ .|+.-....
T Consensus 73 ~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~ 146 (571)
T 2ad6_A 73 NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGHLLALDAKTGKINWEVEVCDP 146 (571)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCCG
T ss_pred CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCEEEEEECCCCCEEEEecCCCC
Confidence 34789998 5 446876442110000 0 112345667888888754 246999999988 476532111
Q ss_pred ccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc--EEEee
Q 010571 73 ELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVME 133 (507)
Q Consensus 73 ~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~ 133 (507)
. .......+-+..++.||+..+.... .....++.||+.|++ |+.-.
T Consensus 147 ~--------------~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 147 K--------------VGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp G--------------GTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEEES
T ss_pred C--------------ccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEEcc
Confidence 0 0001222334568888875432211 113469999999874 76543
No 183
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.26 E-value=3.7 Score=42.55 Aligned_cols=156 Identities=8% Similarity=-0.041 Sum_probs=77.0
Q ss_pred ceEEEEECC--C-CcEEEeecCCCCCC---CcccceEEEE-CCEEEEEcCcCC----CCCccCcEEEEEcCC------Cc
Q 010571 117 MIVRFIDLE--T-NLCGVMETSGKVPV---ARGGHSVTLV-GSRLIIFGGEDR----SRKLLNDVHFLDLET------MT 179 (507)
Q Consensus 117 ~~~~~~d~~--t-~~W~~~~~~g~~p~---~r~~~~~~~~-~~~l~~~GG~~~----~~~~~~~~~~~d~~t------~~ 179 (507)
..+|.++.. + +.-..+. ..+. .......+.- +++.+++...+. .......++.+|+.+ ..
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~---~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLT---PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp CCEEEECTTSTTCCCCEECS---CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CeEEEEcCCCCCCCCCEecc---CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 358999887 4 6555554 2221 1111122222 444344433321 111235799999988 66
Q ss_pred EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCc---CCCcEEEEECC-CC---cEEeeeecCCCCCCCcceEEEEE
Q 010571 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---FFNDLHVLDLQ-TN---EWSQPEIKGDLVTGRAGHAGITI 252 (507)
Q Consensus 180 W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~---~~~~i~~~d~~-~~---~W~~~~~~~~~p~~r~~~~~~~~ 252 (507)
...+...+ ...........+++.+++....... ...+|+++|+. ++ ....+... .........+
T Consensus 179 ~~~l~~~~----~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-----~~~~~~~~~~ 249 (662)
T 3azo_A 179 VRELSDDA----HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-----PEEAIAQAEW 249 (662)
T ss_dssp SEESSCSC----SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-----TTBCEEEEEE
T ss_pred eeEEEecC----CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-----CCceEcceEE
Confidence 55543011 1111223333455444444432211 23579999998 56 34443211 0111122233
Q ss_pred --CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccC
Q 010571 253 --DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 253 --~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~ 287 (507)
++++++.+..++ ...+|++|+.+..+..+...
T Consensus 250 spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 250 APDGSLIVATDRTG---WWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp CTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCC
T ss_pred CCCCeEEEEECCCC---CeEEEEEECCCCceeecccc
Confidence 567766654332 34799999988888877543
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.25 E-value=1.5 Score=46.06 Aligned_cols=222 Identities=9% Similarity=-0.004 Sum_probs=108.4
Q ss_pred ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCC
Q 010571 36 FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKS 113 (507)
Q Consensus 36 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 113 (507)
.|+.+|.+--.. +.....+|+.+...+.|+.+-..... . .........+.+ +++.++|.-.....
T Consensus 78 dG~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~d~~~~-----------a-~~~~~~~~~~~~SPDG~~la~~~~~~G~ 144 (695)
T 2bkl_A 78 RNGRFFYVRTHK-DKEKAILYWRQGESGQEKVLLDPNGW-----------S-KDGTVSLGTWAVSWDGKKVAFAQKPNAA 144 (695)
T ss_dssp ETTEEEEEEECT-TCSSCEEEEEESTTSCCEEEECGGGS-----------S-SSSCEEEEEEEECTTSSEEEEEEEETTC
T ss_pred ECCEEEEEEEcC-CCeEEEEEEEcCCCCCcEEEEchHHh-----------c-cCCCEEEEEEEECCCCCEEEEEECCCCC
Confidence 466666653221 22345678888888888776543211 0 000111222222 55555554332222
Q ss_pred CCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCC-------CccCcEEEEEcCCCcE--EEe
Q 010571 114 SDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSR-------KLLNDVHFLDLETMTW--DAV 183 (507)
Q Consensus 114 ~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~-------~~~~~~~~~d~~t~~W--~~~ 183 (507)
. ...++++|+.++..... ...+.... ...+.. +++.++++..+... .....++.+++.+..- ..+
T Consensus 145 ~-~~~i~v~dl~tg~~~~~---~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv 219 (695)
T 2bkl_A 145 D-EAVLHVIDVDSGEWSKV---DVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV 219 (695)
T ss_dssp S-CCEEEEEETTTCCBCSS---CCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE
T ss_pred c-eEEEEEEECCCCCCcCC---cccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE
Confidence 1 34699999999875311 11222211 223332 45555555543321 1245699999987763 222
Q ss_pred ecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccC
Q 010571 184 EVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGD 263 (507)
Q Consensus 184 ~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~ 263 (507)
.. ....+....+.....++..++++..... ..+++++++..+..++.+.... . .....+..++.+|+....
T Consensus 220 ~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~----~-~~~~~~~~~g~l~~~s~~- 290 (695)
T 2bkl_A 220 HE--RTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGV----G-AKYEVHAWKDRFYVLTDE- 290 (695)
T ss_dssp EC--CCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECS----S-CCEEEEEETTEEEEEECT-
T ss_pred Ee--cCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCC----C-ceEEEEecCCcEEEEECC-
Confidence 21 1111222333444445544444433221 3467888887777787764311 1 112222346665444322
Q ss_pred CCCCcceEEEEEcCcCe---eEEec
Q 010571 264 NNNGCQETIVLNMTKLA---WSILT 285 (507)
Q Consensus 264 ~~~~~~d~~~~d~~~~~---W~~~~ 285 (507)
......++++|+.+.. |..+.
T Consensus 291 -~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 291 -GAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp -TCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred -CCCCCEEEEEeCCCCCccCCeEEe
Confidence 2223578899987654 87764
No 185
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.23 E-value=3.6 Score=39.56 Aligned_cols=147 Identities=18% Similarity=0.216 Sum_probs=73.2
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-...-.. .......+.+ ++..++.|+.+
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~------------------h~~~v~~~~~~p~~~~l~s~s~d---- 186 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG------------------HEQDIYSLDYFPSGDKLVSGSGD---- 186 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC------------------CSSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc------------------CCCCEEEEEEcCCCCEEEEecCC----
Confidence 45566666643 4688999988754332111 0111122222 45555666542
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCC--
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP-- 189 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~-- 189 (507)
..+.+||+.++....... .. ....++.+ ++.+++.|+.+ ..+.+||+.+..-...-.....
T Consensus 187 --~~v~iwd~~~~~~~~~~~---~~---~~v~~~~~~~~~~~~l~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~ 252 (393)
T 1erj_A 187 --RTVRIWDLRTGQCSLTLS---IE---DGVTTVAVSPGDGKYIAAGSLD------RAVRVWDSETGFLVERLDSENESG 252 (393)
T ss_dssp --SEEEEEETTTTEEEEEEE---CS---SCEEEEEECSTTCCEEEEEETT------SCEEEEETTTCCEEEEEC------
T ss_pred --CcEEEEECCCCeeEEEEE---cC---CCcEEEEEECCCCCEEEEEcCC------CcEEEEECCCCcEEEeecccccCC
Confidence 358889998886544321 11 11222222 45677777754 3588999887764432210000
Q ss_pred -CCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 190 -PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 190 -p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
.....-.+++...++.+++.|+.+ ..+.+||+.+.
T Consensus 253 ~~h~~~v~~v~~~~~g~~l~s~s~d-----~~v~~wd~~~~ 288 (393)
T 1erj_A 253 TGHKDSVYSVVFTRDGQSVVSGSLD-----RSVKLWNLQNA 288 (393)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEEC---
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCC-----CEEEEEECCCC
Confidence 001111223333455567777755 35778887653
No 186
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.22 E-value=3.5 Score=38.34 Aligned_cols=234 Identities=13% Similarity=-0.046 Sum_probs=113.6
Q ss_pred CCCeEeeCCCCCeEEeccCCCC---------------CCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCce
Q 010571 3 SGSWHLELPYDLWVTLPVSGAR---------------PSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAW 65 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~---------------p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W 65 (507)
...+.||+....+..+...... +....-+++++. ++.|||.... ..+.+||+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 3466778777777655421110 000112455555 5788887431 2488999888766
Q ss_pred eEeeeccccccCccccCCccCCCCCccceeeEE-E-CCEEEEEcccCCC-----------CCCcceEEEEECCCCcEEEe
Q 010571 66 SNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-W-GTKLLILGGHYKK-----------SSDSMIVRFIDLETNLCGVM 132 (507)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~-----------~~~~~~~~~~d~~t~~W~~~ 132 (507)
+.+..... ..+..+ -..++. - ++.||+.-..... ......+++||+.++....+
T Consensus 114 ~~~~~~~~------------~~~~~~-p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 114 TQLATSVD------------GVPFKW-LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEESEET------------TEECSC-EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EEecccCC------------CCcccc-cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 55532210 001111 122332 2 5688886422110 01235699999988876654
Q ss_pred ecCCCCCCCcccceEEEE-C-CEEEEEcCcCCCCCccCcEEEEEcCC---CcEEEeecCCCCCCCCCCceEEEEcCcEEE
Q 010571 133 ETSGKVPVARGGHSVTLV-G-SRLIIFGGEDRSRKLLNDVHFLDLET---MTWDAVEVTQTPPAPRYDHSAALHANRYLI 207 (507)
Q Consensus 133 ~~~g~~p~~r~~~~~~~~-~-~~l~~~GG~~~~~~~~~~~~~~d~~t---~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~ 207 (507)
......| ..++.- + +.||+.-.. .+.|++|++.+ ........ .+. -..++.-.++.||
T Consensus 181 ~~~~~~p-----~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~~---~~g---P~gi~~d~~G~l~ 243 (322)
T 2fp8_A 181 LKELHVP-----GGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLVK---IPN---PGNIKRNADGHFW 243 (322)
T ss_dssp EEEESCC-----CEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEEE---CSS---EEEEEECTTSCEE
T ss_pred ccCCccC-----cceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEEe---CCC---CCCeEECCCCCEE
Confidence 3211111 122222 2 357776321 35699999875 34443331 111 1234555556688
Q ss_pred EEeCCCCC-----cCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCc
Q 010571 208 VFGGCSHS-----IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 208 i~GG~~~~-----~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~ 278 (507)
|....... ...+.+.+||+.......+......+ .....+++..+++|||.... .+.+.+|++..
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v~~~~-----~~~i~~~~~~~ 313 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYIGTLF-----HGSVGILVYDK 313 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEEECSS-----CSEEEEEEC--
T ss_pred EEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEEeecC-----CCceEEEeccc
Confidence 76532100 01245889998654444443211111 11222334457788876432 12467777543
No 187
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=94.20 E-value=4 Score=38.87 Aligned_cols=189 Identities=16% Similarity=0.252 Sum_probs=108.5
Q ss_pred CeEee--CCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCce--EEEECCCC-----ceeEeeeccccc
Q 010571 5 SWHLE--LPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDV--QVFDLRSL-----AWSNLRLETELD 75 (507)
Q Consensus 5 ~~~~d--~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~--~~~d~~t~-----~W~~~~~~~~~~ 75 (507)
.|.+- .....|..-.. +-+|..-.-|+.|.+++.=|.+|=-+++.....+ +.|...-+ .=+.++..-
T Consensus 260 ~W~~~T~F~~spW~~t~L-~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey--- 335 (670)
T 3ju4_A 260 NWHMGTSFHKSPWRKTDL-GLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEY--- 335 (670)
T ss_dssp EEEEEECSTTSCCEEEEC-CSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGG---
T ss_pred eeeeeeeeccCCceeccc-ccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhh---
Confidence 45443 34778875543 3467777889999999988888854333333332 22221111 111222111
Q ss_pred cCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCC--cccceEEEECCE
Q 010571 76 ADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVA--RGGHSVTLVGSR 153 (507)
Q Consensus 76 ~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~--r~~~~~~~~~~~ 153 (507)
-+.-+-.|+-.+++.||+.--.......-+.+.+-+..-.+|+.+.. |.. ......+.+++.
T Consensus 336 ------------~~~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrf----p~nvHhtnlPFakvgD~ 399 (670)
T 3ju4_A 336 ------------EPDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRF----PHNVHHTTLPFAKVGDD 399 (670)
T ss_dssp ------------CTTEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEEC----TTCCCSSCCCEEEETTE
T ss_pred ------------ccccccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheec----cccccccCCCcceeCCE
Confidence 11334456667799999976444333335568888888889999963 322 223345678999
Q ss_pred EEEEcCcCC---------CCCc---cCcEEEE--Ec-----CCCcEEEeec---CCCCCCCCCCceEEEEcCcEE-EEEe
Q 010571 154 LIIFGGEDR---------SRKL---LNDVHFL--DL-----ETMTWDAVEV---TQTPPAPRYDHSAALHANRYL-IVFG 210 (507)
Q Consensus 154 l~~~GG~~~---------~~~~---~~~~~~~--d~-----~t~~W~~~~~---~g~~p~~r~~~~~~~~~~~~l-~i~G 210 (507)
||+||---. +.++ .....+. ++ +.-.|..+.- .|.....-.+...+++.++.| ||||
T Consensus 400 l~mFgsERA~nEWE~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFG 479 (670)
T 3ju4_A 400 LIMFGSERAENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFG 479 (670)
T ss_dssp EEEEEECSSTTCSSTTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEE
T ss_pred EEEEeccccccccccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEec
Confidence 999986421 1111 1223332 32 3346766642 345555556666677778866 6899
Q ss_pred CCC
Q 010571 211 GCS 213 (507)
Q Consensus 211 G~~ 213 (507)
|-+
T Consensus 480 gEd 482 (670)
T 3ju4_A 480 GED 482 (670)
T ss_dssp EBC
T ss_pred Ccc
Confidence 954
No 188
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.17 E-value=3.1 Score=38.59 Aligned_cols=111 Identities=13% Similarity=0.074 Sum_probs=57.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE----CCEEEEEcccCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW----GTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.+||+.++....+..... .......+.+ ++.+++.|+.+.
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~g----------------H~~~V~~v~~~~~~~~~~l~s~s~D~- 81 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRG----------------HEGPVWQVAWAHPMYGNILASCSYDR- 81 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEEC----------------CSSCEEEEEECCGGGSSCEEEEETTS-
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcC----------------CCccEEEEEeCCCCCCCEEEEEECCC-
Confidence 45666667633 457888887765433332211 1111222332 256666776432
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--C--CEEEEEcCcCCCCCccCcEEEEEcCCC-cEEEe
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAV 183 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~l~~~GG~~~~~~~~~~~~~~d~~t~-~W~~~ 183 (507)
.+.++|+.++.|..... +........++.+ + +.+++.|+.+. .+..+|+.+. .|...
T Consensus 82 -----~v~iWd~~~~~~~~~~~---~~~h~~~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 82 -----KVIIWREENGTWEKSHE---HAGHDSSVNSVCWAPHDYGLILACGSSDG------AISLLTYTGEGQWEVK 143 (316)
T ss_dssp -----CEEEECCSSSCCCEEEE---ECCCSSCCCEEEECCTTTCSCEEEECSSS------CEEEEEECSSSCEEEC
T ss_pred -----EEEEEECCCCcceEEEE---ccCCCCceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCCCCccee
Confidence 38888988877755432 1111111122222 2 45666776542 4777887665 46543
No 189
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=94.11 E-value=0.43 Score=34.60 Aligned_cols=51 Identities=18% Similarity=0.283 Sum_probs=26.7
Q ss_pred hHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH
Q 010571 415 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 415 l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
++.+++.++.+.......+......+...+.+..+.+..+..++++++..+
T Consensus 4 ikkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE 54 (81)
T 1ic2_A 4 IKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTE 54 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344555555555555444555555555555555555555555555555444
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.08 E-value=2.1 Score=45.41 Aligned_cols=224 Identities=12% Similarity=0.056 Sum_probs=107.3
Q ss_pred EECCEEEEEcCCCCCccCCceEEEECC---CCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEccc
Q 010571 35 VFDQKLYIVGGSRNGRFLSDVQVFDLR---SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGH 109 (507)
Q Consensus 35 ~~~~~lyv~GG~~~~~~~~~~~~~d~~---t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 109 (507)
..|+.+|.+-- ..+.....+|+.+.. .+.|..+-..... . ...........+ +++.++++..
T Consensus 116 pdG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l-----------~-~~~~~~~~~~~~SPDG~~la~~~~ 182 (741)
T 1yr2_A 116 RRGASVFYSWN-SGLMNQSQLLVRPADAPVGTKGRVLLDPNTW-----------A-KDGATALDAWAASDDGRLLAYSVQ 182 (741)
T ss_dssp EETTEEEEEEE-CSSCSSCEEEEEETTSCTTCCCEEEECGGGC-----------C-----EEEEEEEECTTSSEEEEEEE
T ss_pred EECCEEEEEEE-cCCCeEEEEEEEcCCccCCCCCEEEECHHHh-----------c-cCCCEEEEeEEECCCCCEEEEEEc
Confidence 34666665532 222224667888876 6777765332210 0 001111122222 5555555543
Q ss_pred CCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCC--------CCccCcEEEEEcCCCcE-
Q 010571 110 YKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRS--------RKLLNDVHFLDLETMTW- 180 (507)
Q Consensus 110 ~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~--------~~~~~~~~~~d~~t~~W- 180 (507)
..... ...++++|+.++....... +... ....+...++.++++..+.. ......++.+++.+..-
T Consensus 183 ~~G~e-~~~i~v~dl~tg~~~~~~~----~~~~-~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~ 256 (741)
T 1yr2_A 183 DGGSD-WRTVKFVGVADGKPLADEL----KWVK-FSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA 256 (741)
T ss_dssp ETTCS-EEEEEEEETTTCCEEEEEE----EEEE-SCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGG
T ss_pred CCCCc-eEEEEEEECCCCCCCCccC----CCce-eccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchh
Confidence 32221 3469999999998765421 1111 01222222233333333221 11244688888877652
Q ss_pred -EEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC--c-EEeeeecCCCCCCCcceEEEEECCEE
Q 010571 181 -DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN--E-WSQPEIKGDLVTGRAGHAGITIDENW 256 (507)
Q Consensus 181 -~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~--~-W~~~~~~~~~p~~r~~~~~~~~~~~l 256 (507)
..+.. ....+..........+++.+++.........++++++|+.+. . |+.+... . ... ......-++.+
T Consensus 257 ~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~-~~~-~~~~~~dg~~l 330 (741)
T 1yr2_A 257 DQPVFA--TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD--L-KAQ-WDFVDGVGDQL 330 (741)
T ss_dssp CEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS--S-SSC-EEEEEEETTEE
T ss_pred CEEEec--cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC--C-Cce-EEEEeccCCEE
Confidence 12211 111122233344445554444443332223578999999876 6 7776321 1 111 11122335566
Q ss_pred EEEeccCCCCCcceEEEEEcCc--CeeEEec
Q 010571 257 YIVGGGDNNNGCQETIVLNMTK--LAWSILT 285 (507)
Q Consensus 257 ~v~GG~~~~~~~~d~~~~d~~~--~~W~~~~ 285 (507)
++.... ......++++|+.+ ..|..+.
T Consensus 331 ~~~s~~--~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 331 WFVSGD--GAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp EEEECT--TCTTCEEEEEECSSSSCEEEEEE
T ss_pred EEEECC--CCCCCEEEEEeCCCCccccEEEe
Confidence 666432 22235789999887 5788764
No 191
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.06 E-value=4.4 Score=38.82 Aligned_cols=199 Identities=12% Similarity=0.088 Sum_probs=91.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCC--cEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEE
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLD 174 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~--~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d 174 (507)
++.+++.|+.+. .+.+||..+. ....+. .+........++.+ ++.+++.|+.+ ..+.+||
T Consensus 78 ~~~~l~~~~~dg------~v~vw~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~d------g~v~iwd 142 (416)
T 2pm9_A 78 NNKIIAGALDNG------SLELYSTNEANNAINSMA---RFSNHSSSVKTVKFNAKQDNVLASGGNN------GEIFIWD 142 (416)
T ss_dssp SSSCEEEEESSS------CEEEECCSSTTSCCCEEE---ECCCSSSCCCEEEECSSSTTBEEEECSS------SCEEBCB
T ss_pred CCCeEEEEccCC------eEEEeecccccccccchh---hccCCccceEEEEEcCCCCCEEEEEcCC------CeEEEEE
Confidence 566666666432 3788888761 111221 11111111122233 25677777653 3588888
Q ss_pred cCCCc------EEEeecCCCCCCCCCCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCC--CCc
Q 010571 175 LETMT------WDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT--GRA 245 (507)
Q Consensus 175 ~~t~~------W~~~~~~g~~p~~r~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~--~r~ 245 (507)
+.+.. -.. ...........-.+++...+ +.+++.|+.+ ..+.+||+.+..-...-. ...+. ...
T Consensus 143 ~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~-~~~~~~~~~~ 215 (416)
T 2pm9_A 143 MNKCTESPSNYTPL-TPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVIHLS-YTSPNSGIKQ 215 (416)
T ss_dssp TTTTSSCTTTCCCB-CCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEEEEC-CCCCSSCCCC
T ss_pred CCCCcccccccccc-ccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcceEEe-ccccccccCC
Confidence 87764 111 10000111112223344444 4577777764 458999998876544211 11000 022
Q ss_pred ceEEEEE--C-CEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcC-ceEEEEEcccCCCc
Q 010571 246 GHAGITI--D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG-EHHLVAFGGYNGKY 321 (507)
Q Consensus 246 ~~~~~~~--~-~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~ 321 (507)
...++.+ + ..+++.|+.++. ...+.+||+.+..- .+..+. ..+......+.+.. +..+++.|+.+
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~-~~~~~~-----~~~~~~v~~~~~s~~~~~~l~s~~~d--- 284 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANT-PLQTLN-----QGHQKGILSLDWCHQDEHLLLSSGRD--- 284 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTS-CSBCCC-----SCCSSCEEEEEECSSCSSCEEEEESS---
T ss_pred ceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCC-CcEEee-----cCccCceeEEEeCCCCCCeEEEEeCC---
Confidence 2233333 2 257777765431 11467888776420 011111 01112233333432 44566667754
Q ss_pred CCeEEEEECCC
Q 010571 322 NNEVFVMRLKP 332 (507)
Q Consensus 322 ~~~v~~~~~~~ 332 (507)
..+.++|+.+
T Consensus 285 -g~v~~wd~~~ 294 (416)
T 2pm9_A 285 -NTVLLWNPES 294 (416)
T ss_dssp -SEEEEECSSS
T ss_pred -CCEEEeeCCC
Confidence 3466777654
No 192
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.85 E-value=4.3 Score=37.95 Aligned_cols=186 Identities=11% Similarity=-0.038 Sum_probs=89.3
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEE-ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccC
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAV-FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~ 82 (507)
..|.||+.++....+.. +. . -++++. -++.+++... ..+++||+.++....+.....
T Consensus 72 ~i~~~d~~~~~~~~~~~----~~-~-v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~~~~~~--------- 129 (326)
T 2ghs_A 72 ELHELHLASGRKTVHAL----PF-M-GSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHAELES--------- 129 (326)
T ss_dssp EEEEEETTTTEEEEEEC----SS-C-EEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEECSST---------
T ss_pred EEEEEECCCCcEEEEEC----CC-c-ceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEEeeCCC---------
Confidence 46788888776655442 11 1 122222 3677777542 349999999998876643210
Q ss_pred CccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CC-EEEEEcCc
Q 010571 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGE 160 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~l~~~GG~ 160 (507)
..+..+....++.-++++|+.............++.|| +++...+.. ... ....++.. ++ .+|+....
T Consensus 130 ---~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~---~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 130 ---DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DIS---IPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp ---TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EES---SEEEEEECTTSCEEEEEETT
T ss_pred ---CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCc---ccCCeEEcCCCCEEEEEECC
Confidence 01111222222223567776432111112245799998 566655431 110 11122222 33 57765432
Q ss_pred CCCCCccCcEEEEEcC--CC-cEE---EeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 161 DRSRKLLNDVHFLDLE--TM-TWD---AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 161 ~~~~~~~~~~~~~d~~--t~-~W~---~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
.+.+++||+. ++ ... ....... ....-.+++...++.+|+..... +.+.+||+....-..+
T Consensus 200 ------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~--~~~~p~gi~~d~~G~lwva~~~~-----~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 200 ------VNRLMRVPLDARTGLPTGKAEVFIDSTG--IKGGMDGSVCDAEGHIWNARWGE-----GAVDRYDTDGNHIARY 266 (326)
T ss_dssp ------TCEEEEEEBCTTTCCBSSCCEEEEECTT--SSSEEEEEEECTTSCEEEEEETT-----TEEEEECTTCCEEEEE
T ss_pred ------CCEEEEEEcccccCCcccCceEEEECCC--CCCCCCeeEECCCCCEEEEEeCC-----CEEEEECCCCCEEEEE
Confidence 3469999975 44 211 1110000 00111234444556677754211 4689999854433333
No 193
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.83 E-value=6.4 Score=39.96 Aligned_cols=195 Identities=12% Similarity=0.022 Sum_probs=87.5
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCC------cEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEE
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETN------LCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVH 171 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~------~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~ 171 (507)
++++++.|+.+ ..+.+||..++ ....... .........++.+ ++..++.+|.+... ...++
T Consensus 77 ~~~~l~s~~~d------g~v~vw~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~~~~~--~~~v~ 145 (615)
T 1pgu_A 77 GSQYLCSGDES------GKVIVWGWTFDKESNSVEVNVKSE---FQVLAGPISDISWDFEGRRLCVVGEGRDN--FGVFI 145 (615)
T ss_dssp TCCEEEEEETT------SEEEEEEEEEEGGGTEEEEEEEEE---EECCSSCEEEEEECTTSSEEEEEECCSSC--SEEEE
T ss_pred CCCEEEEecCC------CEEEEEeCCCCcccccccccccch---hhcccccEEEEEEeCCCCEEEEeccCCCC--ccEEE
Confidence 55677777653 24777777654 3333321 1111111222222 44555566543221 34577
Q ss_pred EEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcE-EEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEE
Q 010571 172 FLDLETMTWDAVEVTQTPPAPRYDHSAALHANRY-LIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGI 250 (507)
Q Consensus 172 ~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~-l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~ 250 (507)
.+|. .+-...- . .....-.++....++. +++.|+.+ ..+.+||+.+..-...- ...........++
T Consensus 146 ~~d~--~~~~~~~---~-~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~--~~~~~~~~~v~~~ 212 (615)
T 1pgu_A 146 SWDS--GNSLGEV---S-GHSQRINACHLKQSRPMRSMTVGDD-----GSVVFYQGPPFKFSASD--RTHHKQGSFVRDV 212 (615)
T ss_dssp ETTT--CCEEEEC---C-SCSSCEEEEEECSSSSCEEEEEETT-----TEEEEEETTTBEEEEEE--CSSSCTTCCEEEE
T ss_pred EEEC--CCcceee---e-cCCccEEEEEECCCCCcEEEEEeCC-----CcEEEEeCCCcceeeee--cccCCCCceEEEE
Confidence 7763 3221111 0 1111122333334443 66666654 46888998765543321 1111100022333
Q ss_pred EE--C-CEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEE
Q 010571 251 TI--D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFV 327 (507)
Q Consensus 251 ~~--~-~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~ 327 (507)
.+ + +..++.|+.++ .+.+||+.+......-. . +...+......+.+. +..+++.|+.+ ..+..
T Consensus 213 ~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~-~---~~~~~~~~v~~~~~~-~~~~l~~~~~d----~~i~~ 278 (615)
T 1pgu_A 213 EFSPDSGEFVITVGSDR-----KISCFDGKSGEFLKYIE-D---DQEPVQGGIFALSWL-DSQKFATVGAD----ATIRV 278 (615)
T ss_dssp EECSTTCCEEEEEETTC-----CEEEEETTTCCEEEECC-B---TTBCCCSCEEEEEES-SSSEEEEEETT----SEEEE
T ss_pred EECCCCCCEEEEEeCCC-----eEEEEECCCCCEeEEec-c---cccccCCceEEEEEc-CCCEEEEEcCC----CcEEE
Confidence 33 4 56777777543 47889987765443210 0 000111222333333 33455666644 35666
Q ss_pred EECCC
Q 010571 328 MRLKP 332 (507)
Q Consensus 328 ~~~~~ 332 (507)
+|+.+
T Consensus 279 wd~~~ 283 (615)
T 1pgu_A 279 WDVTT 283 (615)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77654
No 194
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.77 E-value=5 Score=38.50 Aligned_cols=149 Identities=15% Similarity=0.148 Sum_probs=73.6
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
+++.++.|+.+. .+.+||..+++-...- ... ...-.+++.. ++..++.|+.+ ..+.++|+.++
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~~---~~h-~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~ 197 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMIL---QGH-EQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTG 197 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEE---CCC-SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEE---ccC-CCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCC
Confidence 566777776432 4889999887644332 111 1111122222 34555666543 35888999887
Q ss_pred cEEEeecCCCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCC--CCCCcceEEEEE--C
Q 010571 179 TWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL--VTGRAGHAGITI--D 253 (507)
Q Consensus 179 ~W~~~~~~g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~--p~~r~~~~~~~~--~ 253 (507)
+....... .....+++... ++.+++.|+.+ ..+.+||+.+..-...-..... ......-.++.+ +
T Consensus 198 ~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 198 QCSLTLSI-----EDGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEEEEC-----SSCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred eeEEEEEc-----CCCcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 65443211 11112223333 55577777765 3588899887654332100000 011111123333 4
Q ss_pred CEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 254 ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
+..++.|+.++ .+.++|+.+.
T Consensus 268 g~~l~s~s~d~-----~v~~wd~~~~ 288 (393)
T 1erj_A 268 GQSVVSGSLDR-----SVKLWNLQNA 288 (393)
T ss_dssp SSEEEEEETTS-----EEEEEEC---
T ss_pred CCEEEEEeCCC-----EEEEEECCCC
Confidence 56777776443 4677776543
No 195
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=93.56 E-value=0.35 Score=39.00 Aligned_cols=67 Identities=13% Similarity=0.249 Sum_probs=35.8
Q ss_pred hhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHH
Q 010571 410 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 410 ~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~ 486 (507)
.+..++++..+.++.++++..+|+...+.++.+.+.+.++++.++. ++.+++..+++++..++.+++
T Consensus 68 dEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~----------~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 68 DDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIK----------ELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH
Confidence 3555555666666666666666666655555555544444443333 344445555555555555554
No 196
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.56 E-value=4.1 Score=36.84 Aligned_cols=218 Identities=12% Similarity=0.093 Sum_probs=105.8
Q ss_pred CeEeeCCCCCeEEeccCCCCCC-ccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 5 SWHLELPYDLWVTLPVSGARPS-PRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
+.+||+....-..+...+..+. ...-+++++. ++.||+.+.. ....+.+||+.......+....
T Consensus 53 i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~~~~~~~~~~--------- 119 (286)
T 1q7f_A 53 IQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQFVRKFGATI--------- 119 (286)
T ss_dssp EEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSCEEEEECTTT---------
T ss_pred EEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCcEEEEecCcc---------
Confidence 5567776444334432111111 1123344442 6788887632 1246889995433322222110
Q ss_pred CCccCCCCCccceeeEE-ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEc
Q 010571 82 SGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFG 158 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~G 158 (507)
...-+.++. -+++||+.... ...+.+||+.......+...+.+ .....+.+ ++.+|+..
T Consensus 120 --------~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 120 --------LQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKHL----EFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp --------CSCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTTC----SSEEEEEECSSSEEEEEE
T ss_pred --------CCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCcc----CCcEEEEECCCCCEEEEE
Confidence 111123332 25678887542 23589999776544444321111 11223333 46888765
Q ss_pred CcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCC-cEEEEECCCCcEEeeeec
Q 010571 159 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFN-DLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 159 G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~-~i~~~d~~~~~W~~~~~~ 237 (507)
.. .+.+.+||+.......+...+... .-.+++...++.+|+....+ + .|.+||+....-..+...
T Consensus 182 ~~------~~~i~~~~~~g~~~~~~~~~g~~~---~p~~i~~d~~G~l~v~~~~~-----~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 182 NR------AHCVKVFNYEGQYLRQIGGEGITN---YPIGVGINSNGEILIADNHN-----NFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp GG------GTEEEEEETTCCEEEEESCTTTSC---SEEEEEECTTCCEEEEECSS-----SCEEEEECTTSCEEEEEEES
T ss_pred CC------CCEEEEEcCCCCEEEEEccCCccC---CCcEEEECCCCCEEEEeCCC-----CEEEEEECCCCCEEEEEccc
Confidence 42 346999998655444443222111 11234444566788876432 3 689999765544444321
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEc
Q 010571 238 GDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNM 276 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~ 276 (507)
... . ..++++.- ++++|+... + +.+.+|+.
T Consensus 248 ~~~--~-~~~~i~~~~~g~l~vs~~-~-----~~v~v~~~ 278 (286)
T 1q7f_A 248 VKH--A-QCFDVALMDDGSVVLASK-D-----YRLYIYRY 278 (286)
T ss_dssp SCC--S-CEEEEEEETTTEEEEEET-T-----TEEEEEEC
T ss_pred CCC--C-cceeEEECCCCcEEEECC-C-----CeEEEEEc
Confidence 111 1 11233332 568887732 1 35666664
No 197
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.51 E-value=8.5 Score=40.35 Aligned_cols=110 Identities=17% Similarity=0.097 Sum_probs=60.1
Q ss_pred CCCeEeeCCC--CCeEEeccCCCCCC--c---cccceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccc
Q 010571 3 SGSWHLELPY--DLWVTLPVSGARPS--P---RYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETE 73 (507)
Q Consensus 3 ~~~~~~d~~~--~~W~~~~~~~~~p~--~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~ 73 (507)
..+++||..+ ..|+.-........ . ....+.++.++.||+-.. ...++.+|..|++ |+.-.....
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l~AlDa~TG~~~W~~~~~~~~ 153 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRLEAIDAKTGQRAWSVDTRADH 153 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCSCT
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEEEEEECCCCCEeeeecCcCCC
Confidence 3467888764 45875431110000 0 112334567888887653 2468999999885 765432010
Q ss_pred cccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc--EEEe
Q 010571 74 LDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVM 132 (507)
Q Consensus 74 ~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~ 132 (507)
........+.++.++.+|+..+... ......++.||..|++ |+.-
T Consensus 154 -------------~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 154 -------------KRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp -------------TSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred -------------CCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEec
Confidence 0001222334556888887433221 1124469999999886 8765
No 198
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.25 E-value=3.1 Score=39.33 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=74.2
Q ss_pred ECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 150 VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 150 ~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
..+..++.|+.+ ..|.++|+.+++-.........-....-.+++...++.+++.|+.+ ..+.++|+.++
T Consensus 91 s~d~~l~~~s~d------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~iwd~~~~ 159 (344)
T 4gqb_B 91 VGERGILVASDS------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKVWDLAQQ 159 (344)
T ss_dssp ETTTEEEEEETT------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTT
T ss_pred eCCCeEEEEECC------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 344444555543 3588889887653222100000001111233334566677777765 35889999887
Q ss_pred cEEeeeecCCCCCCCcceEEEEE--C-CEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEE-E
Q 010571 230 EWSQPEIKGDLVTGRAGHAGITI--D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAI-I 305 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~-~ 305 (507)
.-...- ......-.++.+ + ..+++.|+.++ .+.++|+.+..-...... ...++....+. .
T Consensus 160 ~~~~~~-----~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 160 VVLSSY-----RAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDTRCPKPASQIGC------SAPGYLPTSLAWH 223 (344)
T ss_dssp EEEEEE-----CCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTSSSCEEECC----------CCCEEEEEEC
T ss_pred cEEEEE-----cCcCCceEEEEecCCCCCceeeecccc-----ccccccccccceeeeeec------ceeeccceeeeec
Confidence 544321 111111122333 2 35777777543 377889877653321111 11122233333 3
Q ss_pred cCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 306 EGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 306 ~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
+.+..+++.|+.+ ..+.++|+.+.
T Consensus 224 p~~~~~l~sg~~d----g~v~~wd~~~~ 247 (344)
T 4gqb_B 224 PQQSEVFVFGDEN----GTVSLVDTKST 247 (344)
T ss_dssp SSCTTEEEEEETT----SEEEEEESCC-
T ss_pred CCCCcceEEeccC----CcEEEEECCCC
Confidence 3345677778765 35677777543
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.25 E-value=4.8 Score=36.68 Aligned_cols=188 Identities=8% Similarity=0.050 Sum_probs=94.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 114 (507)
.+.+++.|.. ...++++|+.+++ |+.-.... ....+..+..+++||+.+
T Consensus 4 ~~~~lv~~~~-----~~~v~~~d~~tG~~~w~~~~~~~-----------------~~~~~~~~~pdG~ilvs~------- 54 (276)
T 3no2_A 4 PQHLLVGGSG-----WNKIAIINKDTKEIVWEYPLEKG-----------------WECNSVAATKAGEILFSY------- 54 (276)
T ss_dssp CCEEEEECTT-----CSEEEEEETTTTEEEEEEECCTT-----------------CCCCEEEECTTSCEEEEC-------
T ss_pred CCcEEEeeCC-----CCEEEEEECCCCeEEEEeCCCcc-----------------CCCcCeEECCCCCEEEeC-------
Confidence 4667777653 3568899998875 54422110 122233333477888832
Q ss_pred CcceEEEEECCCCc--EEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCC-cEEEeecCC-CC
Q 010571 115 DSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQ-TP 189 (507)
Q Consensus 115 ~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~-~W~~~~~~g-~~ 189 (507)
.+.+..||+ +++ |+... +.....+++... ++.+++....+ ...++.||+... .|+.....+ ..
T Consensus 55 -~~~V~~~d~-~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~ 122 (276)
T 3no2_A 55 -SKGAKMITR-DGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIER 122 (276)
T ss_dssp -BSEEEEECT-TSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSS
T ss_pred -CCCEEEECC-CCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCc
Confidence 234899998 553 55432 111122233333 45555543321 235788887433 244322111 01
Q ss_pred CCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC-cEEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCCCCC
Q 010571 190 PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN-EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNG 267 (507)
Q Consensus 190 p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~-~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~ 267 (507)
+... .+.+....++.+++....+ ..+..||+... .|+.-. +. ..+++... ++.++|.+..+
T Consensus 123 ~~~~-~~~v~~~~~G~~lv~~~~~-----~~v~~~d~~G~~~w~~~~--~~-----~~~~~~~~~~g~~~v~~~~~---- 185 (276)
T 3no2_A 123 PHAQ-FRQINKNKKGNYLVPLFAT-----SEVREIAPNGQLLNSVKL--SG-----TPFSSAFLDNGDCLVACGDA---- 185 (276)
T ss_dssp GGGS-CSCCEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEEC--SS-----CCCEEEECTTSCEEEECBTT----
T ss_pred cccc-ccCceECCCCCEEEEecCC-----CEEEEECCCCCEEEEEEC--CC-----CccceeEcCCCCEEEEeCCC----
Confidence 1111 1223344455455554322 46899998732 265421 11 12334444 67788776532
Q ss_pred cceEEEEEcCcC--eeEE
Q 010571 268 CQETIVLNMTKL--AWSI 283 (507)
Q Consensus 268 ~~d~~~~d~~~~--~W~~ 283 (507)
..++.||+.+. .|+.
T Consensus 186 -~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 186 -HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp -SEEEEECTTTCCEEEEE
T ss_pred -CeEEEEeCcCCcEEEEe
Confidence 24889999855 4664
No 200
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=93.24 E-value=0.83 Score=34.46 Aligned_cols=33 Identities=3% Similarity=0.144 Sum_probs=17.8
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhh
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 443 (507)
+...|+..+...++.+.+.+.++.++++++.+.
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~ 57 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQH 57 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555556666666555555555555554443
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.12 E-value=10 Score=40.07 Aligned_cols=192 Identities=11% Similarity=0.011 Sum_probs=93.5
Q ss_pred cceEEEEECCCCcE--EEeecCCCCCCCcccceEEEE--CC-EEEEEcCcCCCCCccCcEEEEEcCCC--c-EEEeecCC
Q 010571 116 SMIVRFIDLETNLC--GVMETSGKVPVARGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLDLETM--T-WDAVEVTQ 187 (507)
Q Consensus 116 ~~~~~~~d~~t~~W--~~~~~~g~~p~~r~~~~~~~~--~~-~l~~~GG~~~~~~~~~~~~~~d~~t~--~-W~~~~~~g 187 (507)
...++.++..+..- ..+. ..+........+.+ ++ .|++....... ..++++.+|+.+. . |..+...
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~---~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--~~~~l~~~d~~~~~~~~~~~l~~~- 315 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVF---ATPELPKRGHGASVSSDGRWVVITSSEGTD--PVNTVHVARVTNGKIGPVTALIPD- 315 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEE---CCTTCTTCEEEEEECTTSCEEEEEEECTTC--SCCEEEEEEEETTEECCCEEEECS-
T ss_pred CCEEEEEECCCCchhCEEEe---ccCCCCeEEEEEEECCCCCEEEEEEEccCC--CcceEEEEECCCCCCcccEEecCC-
Confidence 34688888876642 1221 11111111122222 34 45554432211 2568999999877 6 8877631
Q ss_pred CCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCC--CcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCC
Q 010571 188 TPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT--NEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNN 265 (507)
Q Consensus 188 ~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 265 (507)
. . .....+...++.||+....+ .....|+.+|+.+ ..|+.+.. .... .-......++.+++....+
T Consensus 316 --~-~-~~~~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~--~~~~--~l~~~~~~~~~lv~~~~~d-- 383 (741)
T 1yr2_A 316 --L-K-AQWDFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVP--ESKD--NLESVGIAGNRLFASYIHD-- 383 (741)
T ss_dssp --S-S-SCEEEEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEEC--CCSS--EEEEEEEEBTEEEEEEEET--
T ss_pred --C-C-ceEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEec--CCCC--eEEEEEEECCEEEEEEEEC--
Confidence 1 1 11222233456576664432 2235699999987 57888632 1111 1112233467777665433
Q ss_pred CCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 266 NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 266 ~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
....++++++....-..+. ++. .+........+++..|++ ...+......+|.||+.+..
T Consensus 384 -g~~~l~~~~~~g~~~~~l~-~~~------~~~v~~~~~s~d~~~l~~-~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 384 -AKSQVLAFDLDGKPAGAVS-LPG------IGSASGLSGRPGDRHAYL-SFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp -TEEEEEEEETTSCEEEECB-CSS------SCEEEEEECCBTCSCEEE-EEEETTEEEEEEEEETTTTE
T ss_pred -CEEEEEEEeCCCCceeecc-CCC------CeEEEEeecCCCCCEEEE-EEcCCCCCCEEEEEECCCCc
Confidence 2456888887655444443 111 111111111122223332 22223345678888886544
No 202
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=92.98 E-value=6 Score=41.40 Aligned_cols=64 Identities=14% Similarity=0.029 Sum_probs=33.2
Q ss_pred cEEEEEcCCCcE-EEeecCCCCCC--CCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 169 DVHFLDLETMTW-DAVEVTQTPPA--PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 169 ~~~~~d~~t~~W-~~~~~~g~~p~--~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
.++.+|+.+.+- ..+... ..+. ...........++.++++..... .....++++|+.++....+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPP-DDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEESSSSCCCEECCCC-CCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEEeeCC-ccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 688889887763 333210 0000 11112233345666554443221 2235689999988876654
No 203
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=92.94 E-value=0.53 Score=37.98 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=31.5
Q ss_pred HhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhH
Q 010571 409 RTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
+.+...|+++++...+++..+..++...+.+++..++...+++.++.++++++.++
T Consensus 74 ~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 74 KKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455555555555555555555555555555555555555555555555555444
No 204
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.88 E-value=12 Score=42.02 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=53.9
Q ss_pred EEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 200 LHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 200 ~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
...++..+++|+.+ ..+.+||+.+....... ..........+..-++..++.|+.++ .+.++|..+.
T Consensus 969 ~sp~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~---~~h~~~v~~l~~s~dg~~l~s~~~dg-----~i~vwd~~~~ 1035 (1249)
T 3sfz_A 969 LSPHLEYVAFGDED-----GAIKIIELPNNRVFSSG---VGHKKAVRHIQFTADGKTLISSSEDS-----VIQVWNWQTG 1035 (1249)
T ss_dssp ECTTSSEEEEEETT-----SCCEEEETTTTSCEEEC---CCCSSCCCCEEECSSSSCEEEECSSS-----BEEEEETTTT
T ss_pred EcCCCCEEEEEcCC-----CCEEEEEcCCCceeeec---ccCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 33455567777654 35788898776543321 11111111122222556777776543 4788998887
Q ss_pred eeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 280 AWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 280 ~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
....+... ......+.+..+..+ +.|+.+ ..+..+|+.+.
T Consensus 1036 ~~~~~~~~---------~~~v~~~~~~~~~~l-~~~~~d----g~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1036 DYVFLQAH---------QETVKDFRLLQDSRL-LSWSFD----GTVKVWNVITG 1075 (1249)
T ss_dssp EEECCBCC---------SSCEEEEEECSSSEE-EEEESS----SEEEEEETTTT
T ss_pred ceEEEecC---------CCcEEEEEEcCCCcE-EEEECC----CcEEEEECCCC
Confidence 65533211 122333333344444 445543 35667776543
No 205
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=92.82 E-value=6.2 Score=36.79 Aligned_cols=235 Identities=10% Similarity=-0.016 Sum_probs=116.3
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCC--ceeEeeeccccccCccc
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSL--AWSNLRLETELDADKTE 80 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~--~W~~~~~~~~~~~~~~~ 80 (507)
..+.+|+.+..-......+.+. .-+++++. ++.||+.... ...+.+||+... .-..+......
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~---~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~------ 135 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFY---LPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQP------ 135 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCS---SEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBC------
T ss_pred cEEEEECCCCeEEeccCCCccC---CceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCC------
Confidence 3567777766654433211111 22334433 5668877552 346889998654 22222211100
Q ss_pred cCCccCCCCCccce-eeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCC----CCCcccceEEEE--C
Q 010571 81 DSGLLEVLPPMSDH-CMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV----PVARGGHSVTLV--G 151 (507)
Q Consensus 81 ~~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~----p~~r~~~~~~~~--~ 151 (507)
.......... .++.. ++.||+..+.. ...+.+||+....-..+...+.. +........+.+ +
T Consensus 136 ----g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 136 ----GSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp ----CCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred ----CCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 0000111122 23332 57899987521 33589999655443333322221 111222233333 3
Q ss_pred -CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCC--CcCCCcEEEEECCC
Q 010571 152 -SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSH--SIFFNDLHVLDLQT 228 (507)
Q Consensus 152 -~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~--~~~~~~i~~~d~~~ 228 (507)
+.||+.... .+.|.+||+.+++....-... .....-.+++... +.+|...|... +...+.+.++|+.+
T Consensus 207 ~g~l~v~d~~------~~~I~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 207 LDQLCVADRE------NGRIQCFKTDTKEFVREIKHA--SFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp TTEEEEEETT------TTEEEEEETTTCCEEEEECCT--TTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEEecc--ccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 789987643 346999999877765543211 1111122333333 66777766421 22335789999888
Q ss_pred CcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcC
Q 010571 229 NEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 229 ~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~ 277 (507)
+.....- +..+........+.+ ++.+||....++ .+.+|++.
T Consensus 278 g~~~~~~--~~~~~~~~~p~~ia~~~dG~lyvad~~~~-----~I~~~~~~ 321 (329)
T 3fvz_A 278 GEIIDVF--KPVRKHFDMPHDIVASEDGTVYIGDAHTN-----TVWKFTLT 321 (329)
T ss_dssp CCEEEEE--CCSSSCCSSEEEEEECTTSEEEEEESSSC-----CEEEEEEE
T ss_pred CeEEEEE--cCCCCccCCeeEEEECCCCCEEEEECCCC-----EEEEEeCC
Confidence 8765531 211222222333444 457888765332 47777754
No 206
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=92.82 E-value=5.9 Score=36.59 Aligned_cols=63 Identities=14% Similarity=0.117 Sum_probs=33.9
Q ss_pred CCE-EEEEcccCCCCCCcceEEEEEC-CCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTK-LLILGGHYKKSSDSMIVRFIDL-ETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~-iyv~GG~~~~~~~~~~~~~~d~-~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++. +++.|+.+ ..+.+||+ .++....+. ..+....-.+++...+.+++.|+.+ ..+..||+.+
T Consensus 67 ~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~---~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQ------GEILKVDLIGSPSFQALT---NNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETT------SCEEEECSSSSSSEEECB---SCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHH
T ss_pred CCCcEEEEEcCC------CeEEEEEeccCCceEecc---ccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccc
Confidence 566 66777643 24889999 888765543 1001111122222325555566543 3588888754
No 207
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.81 E-value=6.7 Score=37.16 Aligned_cols=149 Identities=8% Similarity=-0.013 Sum_probs=75.5
Q ss_pred cCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEc-CcE-EEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCC
Q 010571 167 LNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRY-LIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGR 244 (507)
Q Consensus 167 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~-~~~-l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r 244 (507)
...++.+|+.+++...+... ........... ++. |++............++.+|+.+..+..+.. ..+.
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~-----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~----~~~~ 237 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD-----TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE----HAEG 237 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE-----SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC----CCTT
T ss_pred cceEEEEECCCCcEEeeccC-----CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec----cCCC
Confidence 34689999999887766521 11112233334 343 4443321111222579999998877766521 1111
Q ss_pred cceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEc-CceEEEEEcccC---
Q 010571 245 AGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GEHHLVAFGGYN--- 318 (507)
Q Consensus 245 ~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~l~v~GG~~--- 318 (507)
.......+ +++.+++...........++++|+.+.....+...+. .. ....+ ++. ++++++..
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--------~~--~~~s~~dg~-~l~~~~~~~p~ 306 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--------CS--HLMSNFDGS-LMVGDGCDAPV 306 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--------EE--EEEECSSSS-EEEEEECCC--
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--------CC--CCccCCCCc-eEEEecCCcce
Confidence 12222333 4454444332222222349999998887776654321 12 22333 334 44444321
Q ss_pred ---------CCcCCeEEEEECCCCCC
Q 010571 319 ---------GKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 319 ---------~~~~~~v~~~~~~~~~w 335 (507)
......+|.+|+.....
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp --------CCCCCCEEEEEETTTTBC
T ss_pred eeccccccccCCCCcEEEEecccCce
Confidence 12347899999876544
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.75 E-value=11 Score=39.48 Aligned_cols=149 Identities=13% Similarity=0.042 Sum_probs=80.0
Q ss_pred cceEEEEECCCC--cEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCC---cEEEeecCCCCC
Q 010571 116 SMIVRFIDLETN--LCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM---TWDAVEVTQTPP 190 (507)
Q Consensus 116 ~~~~~~~d~~t~--~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~---~W~~~~~~g~~p 190 (507)
.+.++.+|..+. .|..+.. +...........++.+|+....+.. ...++.+|+.+. .|+.+.+...
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~----~~~~~~~~~~~~g~~l~~~t~~~~~---~~~l~~~d~~~~~~~~~~~l~~~~~-- 328 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQG----DLDADVSLVDNKGSTLYLLTNRDAP---NRRLVTVDAANPGPAHWRDLIPERQ-- 328 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEEC----SSSSCEEEEEEETTEEEEEECTTCT---TCEEEEEETTSCCGGGCEEEECCCS--
T ss_pred CcEEEEEECCCCCCceEEEeC----CCCceEEEEeccCCEEEEEECCCCC---CCEEEEEeCCCCCccccEEEecCCC--
Confidence 357999998776 6877752 1111112234457899988765432 347999998764 4887753211
Q ss_pred CCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--C-CEEEEEeccCCCCC
Q 010571 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--D-ENWYIVGGGDNNNG 267 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~ 267 (507)
.. . ... ..+++|++..-.++ ...++++|+.......+. .|..... ..... + +.+++... +...
T Consensus 329 -~~-~-~~s-~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~----~p~~~~~-~~~~~~~d~~~l~~~~s--s~~t 394 (693)
T 3iuj_A 329 -QV-L-TVH-SGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA----LPGLGSV-SGFNGKHDDPALYFGFE--NYAQ 394 (693)
T ss_dssp -SC-E-EEE-EETTEEEEEEEETT---EEEEEEECTTSCEEEEEC----CSSSSEE-EECCCCTTCSCEEEEEE--CSSS
T ss_pred -CE-E-EEE-EECCEEEEEEEECC---eeEEEEEECCCCeeEEee----cCCCceE-EeeecCCCCCEEEEEec--CCCC
Confidence 11 1 333 33554554432221 246889998866555542 2222111 11111 2 23443322 1123
Q ss_pred cceEEEEEcCcCeeEEeccC
Q 010571 268 CQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 268 ~~d~~~~d~~~~~W~~~~~~ 287 (507)
...++.||+.+...+.+...
T Consensus 395 P~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 395 PPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp CCEEEEECTTTCCEEEEECC
T ss_pred CCEEEEEECCCCeEEEEEeC
Confidence 35789999988877766543
No 209
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=92.74 E-value=2 Score=32.18 Aligned_cols=33 Identities=18% Similarity=0.369 Sum_probs=16.1
Q ss_pred HhhhhhhHHHHHHhhccchhhHHhHHHHHhhHh
Q 010571 409 RTENSRFREKIDEVNSTHSELSKELSSVQGQLV 441 (507)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~ 441 (507)
..+...+.++|..++++...+..++...+.+..
T Consensus 17 ~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~ 49 (96)
T 3q8t_A 17 ALEEERLIQELEDVEKNRKVVAENLEKVQAEAE 49 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 334455555555555555555444444444433
No 210
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.67 E-value=11 Score=39.37 Aligned_cols=126 Identities=14% Similarity=0.025 Sum_probs=69.7
Q ss_pred eeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc--EEEeecCCCC--CC---CcccceEEEECCEEEEEcCcCCCCCc
Q 010571 94 HCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKV--PV---ARGGHSVTLVGSRLIIFGGEDRSRKL 166 (507)
Q Consensus 94 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~--p~---~r~~~~~~~~~~~l~~~GG~~~~~~~ 166 (507)
.+-++.++.||+... ...++.+|..|++ |+.-...... +. .....+.++.++.||+...
T Consensus 71 ~~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------- 136 (677)
T ss_dssp CCCEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------
T ss_pred eCCEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------
Confidence 344567999999865 2358999998874 8765421000 00 0112234556788887532
Q ss_pred cCcEEEEEcCCCc--EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc--EEee
Q 010571 167 LNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQP 234 (507)
Q Consensus 167 ~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~--W~~~ 234 (507)
...++.+|..|++ |+..... ..+......+...+.++.+|+..+.........++.||..++. |+.-
T Consensus 137 dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 137 DGRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TSEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 2469999998875 8765320 1111111111222336656554332222234579999998875 8764
No 211
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.65 E-value=2.4 Score=40.44 Aligned_cols=109 Identities=10% Similarity=0.013 Sum_probs=51.1
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEE-EcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAAL-HANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 151 ~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++..++.|+.+ ..+.+||+.+..-.................... ......+++++.+ ..+.+||+.+.
T Consensus 256 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~v~d~~~~ 324 (408)
T 4a11_B 256 DGLHLLTVGTD------NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----STIAVYTVYSG 324 (408)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----TEEEEEETTTC
T ss_pred CCCEEEEecCC------CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----CEEEEEECcCC
Confidence 44566666643 358999998765432221111111111111111 1222234444433 46889998876
Q ss_pred cEEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEcCcC
Q 010571 230 EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~ 279 (507)
.-...-. + ..... .+++.. ++.+++.|+.++ .+.+||+.+.
T Consensus 325 ~~~~~~~-~--~~~~v-~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~ 366 (408)
T 4a11_B 325 EQITMLK-G--HYKTV-DCCVFQSNFQELYSGSRDC-----NILAWVPSLY 366 (408)
T ss_dssp CEEEEEC-C--CSSCE-EEEEEETTTTEEEEEETTS-----CEEEEEECC-
T ss_pred cceeeec-c--CCCeE-EEEEEcCCCCEEEEECCCC-----eEEEEeCCCC
Confidence 5443210 1 11111 122222 567777777554 3677777655
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.64 E-value=6.5 Score=36.64 Aligned_cols=147 Identities=10% Similarity=-0.041 Sum_probs=76.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
++.+|+.+.. ...+++||+.++....+.. + ......+..-++++++...
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~-----------------~~v~~i~~~~dg~l~v~~~-------- 108 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL-P-----------------FMGSALAKISDSKQLIASD-------- 108 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC-S-----------------SCEEEEEEEETTEEEEEET--------
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC-C-----------------CcceEEEEeCCCeEEEEEC--------
Confidence 3677777542 2468999999887654432 1 1122222334788877541
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCC
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~ 194 (507)
..++.||+.+++...+..... ..+........+ ++.+|+.............++.|| +++...+..... .
T Consensus 109 ~gl~~~d~~~g~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~-----~ 180 (326)
T 2ghs_A 109 DGLFLRDTATGVLTLHAELES-DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS-----I 180 (326)
T ss_dssp TEEEEEETTTCCEEEEECSST-TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES-----S
T ss_pred CCEEEEECCCCcEEEEeeCCC-CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc-----c
Confidence 249999999999877652111 011111122233 456665321111111245689998 566655432101 1
Q ss_pred CceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECC
Q 010571 195 DHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 195 ~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~ 227 (507)
...++...++ .+|+.... .+.|++||+.
T Consensus 181 ~~~i~~s~dg~~lyv~~~~-----~~~I~~~d~~ 209 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTK-----VNRLMRVPLD 209 (326)
T ss_dssp EEEEEECTTSCEEEEEETT-----TCEEEEEEBC
T ss_pred cCCeEEcCCCCEEEEEECC-----CCEEEEEEcc
Confidence 1233333344 56765432 2579999975
No 213
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.59 E-value=12 Score=39.58 Aligned_cols=189 Identities=11% Similarity=0.058 Sum_probs=98.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
++.|+|-. .+.+++||+.+.++.. +. . . . ...-.+++..++.|++...
T Consensus 73 ~g~lWigT-------~~Gl~~yd~~~~~f~~-~~-~-------------~-~-~~~i~~i~~~~g~lWigt~-------- 120 (758)
T 3ott_A 73 NTYLYMGT-------DNGILVYNYRADRYEQ-PE-T-------------D-F-PTDVRTMALQGDTLWLGAL-------- 120 (758)
T ss_dssp TTEEEEEE-------TTEEEEEETTTTEECC-CS-C-------------C-C-CSCEEEEEEETTEEEEEET--------
T ss_pred CCcEEEEe-------CCCeEEEeCCCCEEEC-cc-c-------------C-C-CceEEEEEecCCcEEEEcC--------
Confidence 55666643 2458899999987754 11 0 0 0 1111233445788887421
Q ss_pred ceEEEEECCCCcEEEeecC-CCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCC-CC
Q 010571 117 MIVRFIDLETNLCGVMETS-GKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP-AP 192 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~-g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p-~~ 192 (507)
+-+++||+.++++...... ..+|.. ...+... ++.|++.. .+.+++||+.+.++.......... ..
T Consensus 121 ~Gl~~~~~~~~~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWigt--------~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 190 (758)
T 3ott_A 121 NGLYTYQLQSRKLTSFDTRRNGLPNN--TIYSIIRTKDNQIYVGT--------YNGLCRYIPSNGKFEGIPLPVHSSQSN 190 (758)
T ss_dssp TEEEEEETTTCCEEEECHHHHCCSCS--CEEEEEECTTCCEEEEE--------TTEEEEEETTTTEEEEECCCCCTTCSS
T ss_pred CcceeEeCCCCeEEEeccCCCCcCCC--eEEEEEEcCCCCEEEEe--------CCCHhhCccCCCceEEecCCCcccccc
Confidence 1388999999988776311 112221 1122222 45777732 135889999988887654211100 01
Q ss_pred CCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCCCCCcce
Q 010571 193 RYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 193 r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d 270 (507)
..-.+++... ++.|+|.. . .-+++||+.+..+..... .+.. .-.+++.- ++.|+|-- . .-
T Consensus 191 ~~i~~i~~d~~~~~lWigt--~-----~Gl~~~~~~~~~~~~~~~---l~~~-~i~~i~~d~~g~lWigT--~-----~G 252 (758)
T 3ott_A 191 LFVNSLLEDTTRQCVWIGT--E-----GYLFQYFPSTGQIKQTEA---FHNN-SIKSLALDGNGDLLAGT--D-----NG 252 (758)
T ss_dssp CCEEEEEEETTTTEEEEEE--E-----EEEEEEETTTTEEEEEEE---EEEE-EEEEEEECTTCCEEEEE--T-----TE
T ss_pred ceeEEEEEECCCCEEEEEE--C-----CCCeEEcCCCCeEEeccC---CCCC-eEEEEEEcCCCCEEEEe--C-----Cc
Confidence 1112233332 34467632 1 248899999888876421 1111 11122222 35666542 1 14
Q ss_pred EEEEEcCcCeeEEec
Q 010571 271 TIVLNMTKLAWSILT 285 (507)
Q Consensus 271 ~~~~d~~~~~W~~~~ 285 (507)
+++|++.+..+..+.
T Consensus 253 l~~~~~~~~~~~~~~ 267 (758)
T 3ott_A 253 LYVYHNDTTPLQHII 267 (758)
T ss_dssp EEEECCTTSCCEEEC
T ss_pred eeEEecCCCcEEEEE
Confidence 788998888776654
No 214
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=92.53 E-value=0.083 Score=54.12 Aligned_cols=9 Identities=0% Similarity=-0.064 Sum_probs=5.3
Q ss_pred eEEEEEcCc
Q 010571 270 ETIVLNMTK 278 (507)
Q Consensus 270 d~~~~d~~~ 278 (507)
.+.+|+..+
T Consensus 224 GI~v~~~~~ 232 (575)
T 2i1j_A 224 GLNIYEKDD 232 (575)
T ss_dssp EEEEEETTC
T ss_pred eeEEEeCCC
Confidence 366776554
No 215
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.30 E-value=11 Score=38.53 Aligned_cols=108 Identities=12% Similarity=0.018 Sum_probs=56.2
Q ss_pred CCeEeeCCC--CCeEEeccCCCCCCcc---ccceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeecccccc
Q 010571 4 GSWHLELPY--DLWVTLPVSGARPSPR---YKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDA 76 (507)
Q Consensus 4 ~~~~~d~~~--~~W~~~~~~~~~p~~r---~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~ 76 (507)
.+++||..+ ..|+.-........+. ...+.++.++.||+... ...++.+|..|++ |+.-......
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~AlD~~TG~~~W~~~~~~~~~-- 150 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVALNKNTGKVVWKKKFADHGA-- 150 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEEEESSSCCEEEEEECSCGGG--
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEEEECCCCCEEeeecCCCCCc--
Confidence 478899864 4587654211111111 12344567888887532 2469999999985 7653221100
Q ss_pred CccccCCccCCCCCccceeeEEECC------EEEEEcccCCCCCCcceEEEEECCCCc--EEEe
Q 010571 77 DKTEDSGLLEVLPPMSDHCMVKWGT------KLLILGGHYKKSSDSMIVRFIDLETNL--CGVM 132 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~~~------~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~ 132 (507)
.-....+-++.++ .||+ |...........++.||+.|++ |+..
T Consensus 151 ------------~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 151 ------------GYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp ------------TCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred ------------CcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeecC
Confidence 0011112233455 5554 4321111124469999999875 8653
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.28 E-value=6.8 Score=35.98 Aligned_cols=202 Identities=8% Similarity=-0.010 Sum_probs=97.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEE-ECCEEEEEcccCCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 115 (507)
++.||+.+-. ...+++|++ ++....+.... .. -++++. -+++||+....
T Consensus 56 g~~l~~~d~~-----~~~i~~~~~-~g~~~~~~~~~-----------------~~-~~gl~~d~dG~l~v~~~~------ 105 (305)
T 3dr2_A 56 QRTLVWSDLV-----GRRVLGWRE-DGTVDVLLDAT-----------------AF-TNGNAVDAQQRLVHCEHG------ 105 (305)
T ss_dssp GTEEEEEETT-----TTEEEEEET-TSCEEEEEESC-----------------SC-EEEEEECTTSCEEEEETT------
T ss_pred CCEEEEEECC-----CCEEEEEeC-CCCEEEEeCCC-----------------Cc-cceeeECCCCCEEEEECC------
Confidence 4457776542 245888888 55544433211 11 122222 25777776321
Q ss_pred cceEEEEECCCCcEEEeecCC-CCCCCcccceEEEE-CCEEEEE----cCcCC-------CCCccCcEEEEEcCCCcEEE
Q 010571 116 SMIVRFIDLETNLCGVMETSG-KVPVARGGHSVTLV-GSRLIIF----GGEDR-------SRKLLNDVHFLDLETMTWDA 182 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g-~~p~~r~~~~~~~~-~~~l~~~----GG~~~-------~~~~~~~~~~~d~~t~~W~~ 182 (507)
...+..||+. ++...+.... ..+..+. ..++.- ++.+|+. |-... .......+++||+.+++...
T Consensus 106 ~~~v~~~~~~-g~~~~~~~~~~~~~~~~~-~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~ 183 (305)
T 3dr2_A 106 RRAITRSDAD-GQAHLLVGRYAGKRLNSP-NDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR 183 (305)
T ss_dssp TTEEEEECTT-SCEEEEECEETTEECSCC-CCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE
T ss_pred CCEEEEECCC-CCEEEEEeccCCCccCCC-CCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE
Confidence 2358889886 6666654210 0011111 122222 5678874 33210 01113569999998888776
Q ss_pred eecCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEE
Q 010571 183 VEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIV 259 (507)
Q Consensus 183 ~~~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~ 259 (507)
+. ....| ..++...++ .||+..........+.|++|++..............+.. ......+ +++||+.
T Consensus 184 ~~-~~~~p-----~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~--~pdgi~~d~~G~lwv~ 255 (305)
T 3dr2_A 184 MA-DLDHP-----NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG--LPDGFCVDRGGWLWSS 255 (305)
T ss_dssp EE-EESSE-----EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS--CCCSEEECTTSCEEEC
T ss_pred Ee-cCCCC-----cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC--CCCeEEECCCCCEEEe
Confidence 64 11111 234444444 477764422111125799999876543221111111111 1112233 4667765
Q ss_pred eccCCCCCcceEEEEEcCcCeeEEec
Q 010571 260 GGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 260 GG~~~~~~~~d~~~~d~~~~~W~~~~ 285 (507)
.+ ..+++||+.......+.
T Consensus 256 ~~-------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 256 SG-------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp CS-------SEEEEECTTSCEEEEEE
T ss_pred cC-------CcEEEECCCCCEEEEEE
Confidence 32 24889999766655553
No 217
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.22 E-value=6.7 Score=35.79 Aligned_cols=115 Identities=14% Similarity=0.187 Sum_probs=52.3
Q ss_pred EEEEEcCcCCCCCccCcEEEEEcCCCc--EEEeecCCCCCCCCCCceEEEEcC---cEEEEEeCCCCCcCCCcEEEEECC
Q 010571 153 RLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHAN---RYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 153 ~l~~~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~---~~l~i~GG~~~~~~~~~i~~~d~~ 227 (507)
.+++.|+.+. .+.++|+.+.. |........ ....-.+++...+ +.+++.|+.+ ..+.++|+.
T Consensus 171 ~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~--H~~~V~~v~~sp~~~~~~~las~s~D-----~~v~iWd~~ 237 (297)
T 2pm7_B 171 RKFVTGGADN------LVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYMASVSQD-----RTCIIWTQD 237 (297)
T ss_dssp CEEEEEETTS------CEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETT-----SCEEEEEES
T ss_pred ceEEEEcCCC------cEEEEEEcCCCceEEEEEEecC--CCCceEEEEECCCCCCceEEEEEECC-----CcEEEEEeC
Confidence 4666776542 47777775543 543321100 0111112222233 3567777755 357777765
Q ss_pred CC--cEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcC-cCeeEEeccC
Q 010571 228 TN--EWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMT-KLAWSILTSV 287 (507)
Q Consensus 228 ~~--~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~-~~~W~~~~~~ 287 (507)
+. .|........ ..+.. ...+.+ ++.+++.||.++. +.+++.. ...|..+..+
T Consensus 238 ~~~~~~~~~~~~~~-~~~~~-v~~~~~s~~g~~las~~~D~~-----v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 238 NEQGPWKKTLLKEE-KFPDV-LWRASWSLSGNVLALSGGDNK-----VTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp STTSCCEEEESSSS-CCSSC-EEEEEECSSSCCEEEEETTSC-----EEEEEECTTSCEEEC---
T ss_pred CCCCccceeeeecc-cCCCc-EEEEEECCCCCEEEEEcCCCc-----EEEEEECCCCcEEecccc
Confidence 53 3543211100 11111 122233 5667777775432 5556654 4578876543
No 218
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.16 E-value=12 Score=38.49 Aligned_cols=110 Identities=13% Similarity=0.072 Sum_probs=58.2
Q ss_pred CCCeEeeC-CC--CCeEEeccCCCC--CCcc---ccceEEE--ECCE----EEEEcCCCCCccCCceEEEECCCCc--ee
Q 010571 3 SGSWHLEL-PY--DLWVTLPVSGAR--PSPR---YKHAAAV--FDQK----LYIVGGSRNGRFLSDVQVFDLRSLA--WS 66 (507)
Q Consensus 3 ~~~~~~d~-~~--~~W~~~~~~~~~--p~~r---~~~~~~~--~~~~----lyv~GG~~~~~~~~~~~~~d~~t~~--W~ 66 (507)
..+++||. .+ ..|+.-+..... +.++ ...+.++ .++. ||+... ...++.+|..|++ |+
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------dg~l~AlDa~TG~~~W~ 146 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------DGNVAALNAETGETVWK 146 (599)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT------TSEEEEEETTTCCEEEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC------CCEEEEEECCCCCEEEe
Confidence 34789998 54 468765421110 0011 1233444 4666 777543 2469999999885 76
Q ss_pred EeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc--EEEee
Q 010571 67 NLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVME 133 (507)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~ 133 (507)
.-..... .......+-++.++.||+-.+... ......++.||..|++ |+.-.
T Consensus 147 ~~~~~~~--------------~~~~~~ssP~v~~g~V~vg~~g~e-~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 147 VENSDIK--------------VGSTLTIAPYVVKDKVIIGSSGAE-LGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EECCCGG--------------GTCBCCSCCEEETTEEEECCBCGG-GTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCCCC--------------ccceeecCCEEECCEEEEEecccc-cCCCCeEEEEECCCCcEEEEEcC
Confidence 5321100 000112233456888876443211 1113469999999875 87654
No 219
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.95 E-value=14 Score=40.89 Aligned_cols=144 Identities=13% Similarity=-0.014 Sum_probs=76.8
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEE-EEEcCCCcEEEeecCCCCCCCCCCc
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVH-FLDLETMTWDAVEVTQTPPAPRYDH 196 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~-~~d~~t~~W~~~~~~g~~p~~r~~~ 196 (507)
.++.++..++....+. ..+..+....... ++..+++++. .+.++ .+|+.+..-..+. + .....+
T Consensus 318 ~i~~~~~~~~~~~~~~---~~~~~~~~~~~~s-dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~--~---~~~~~~ 382 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVP---EPLRIRYVRRGGD-TKVAFIHGTR------EGDFLGIYDYRTGKAEKFE--E---NLGNVF 382 (1045)
T ss_dssp EEEEECTTSSBEEECS---CCSCEEEEEECSS-SEEEEEEEET------TEEEEEEEETTTCCEEECC--C---CCCSEE
T ss_pred EEEEEcCCCCceEEcc---CCCcceEEeeeEc-CCCeEEEEEC------CCceEEEEECCCCCceEec--C---Ccccee
Confidence 5888888877655543 1111121122222 5544444432 23688 8999887765543 1 112223
Q ss_pred eEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCC-----CCCcceE
Q 010571 197 SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN-----NNGCQET 271 (507)
Q Consensus 197 ~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~-----~~~~~d~ 271 (507)
.++...++..+++++.. ..++++|+.++.-..+.... .......+..-+++.+++++... ......+
T Consensus 383 ~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~---~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSR---EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp EEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECS---SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred eeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCC---CCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 34444555566666543 47999999988876653211 11111122223566666655432 1224579
Q ss_pred EEEEcCcCeeEEe
Q 010571 272 IVLNMTKLAWSIL 284 (507)
Q Consensus 272 ~~~d~~~~~W~~~ 284 (507)
+++|+.+.....+
T Consensus 455 ~l~d~~~g~~~~l 467 (1045)
T 1k32_A 455 HVYDMEGRKIFAA 467 (1045)
T ss_dssp EEEETTTTEEEEC
T ss_pred EEEECCCCcEEEe
Confidence 9999988775544
No 220
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.93 E-value=8.1 Score=36.10 Aligned_cols=218 Identities=8% Similarity=0.053 Sum_probs=107.4
Q ss_pred CCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCc
Q 010571 12 YDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPM 91 (507)
Q Consensus 12 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r 91 (507)
-..|+.+......+ ...-.+++..++.+|+.|.. ..+++-+-.-.+|+.+..... .+..
T Consensus 65 G~tW~~~~~~~~~~-~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~--------------~~~~ 123 (327)
T 2xbg_A 65 GQTWEPRTLVLDHS-DYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPK--------------LPGS 123 (327)
T ss_dssp TSSCEECCCCCSCC-CCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTT--------------CSSC
T ss_pred CCCCeECCCCCCCC-CccEEEEEecCCeEEEEECC------CeEEEECCCCCCceECccccC--------------CCCC
Confidence 45898886321111 11233444457788887531 233332222458988764321 0111
Q ss_pred cceeeE-EECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCc
Q 010571 92 SDHCMV-KWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 92 ~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~ 169 (507)
. +.++ .-++.+|+.|.. . .++.-+-.-.+|+.+.. +.....+.++.. ++.+|++|-. ..
T Consensus 124 ~-~~i~~~~~~~~~~~~~~---g----~v~~S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~-------G~ 184 (327)
T 2xbg_A 124 P-RLIKALGNGSAEMITNV---G----AIYRTKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR-------GS 184 (327)
T ss_dssp E-EEEEEEETTEEEEEETT---C----CEEEESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT-------SS
T ss_pred e-EEEEEECCCCEEEEeCC---c----cEEEEcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC-------Cc
Confidence 2 3333 346788887741 1 24444334568999863 222222333333 3466665521 13
Q ss_pred EEEEEcC-CCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECC-CCcEEeeeecCCCCCCCcce
Q 010571 170 VHFLDLE-TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 170 ~~~~d~~-t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~ 247 (507)
++.-+-. -.+|+.+.. +.+...+.++...++.+|+.+..+ .+++.+.. ..+|+.+.. +.++.....+
T Consensus 185 ~~~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~G------~~~~s~~D~G~tW~~~~~-~~~~~~~~~~ 253 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVNGG------KIAFSDPDNSENWGELLS-PLRRNSVGFL 253 (327)
T ss_dssp EEEEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEEETTT------EEEEEETTEEEEECCCBC-TTSSCCSCEE
T ss_pred EEEEeCCCCCceeECCC----CCCCccceeEECCCCCEEEEeCCc------eEEEecCCCCCeeEeccC-CcccCCcceE
Confidence 4444322 578998852 334444555555566688776421 24443322 457987632 1122222223
Q ss_pred EEEEE-CCEEEEEeccCCCCCcceEEEEEcCcCeeEEecc
Q 010571 248 AGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 286 (507)
Q Consensus 248 ~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~ 286 (507)
+++.. ++.+|++|+. + .+++-.-.-.+|+.+..
T Consensus 254 ~v~~~~~~~~~~~g~~-g-----~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 254 DLAYRTPNEVWLAGGA-G-----ALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp EEEESSSSCEEEEEST-T-----CEEEESSTTSSCEECGG
T ss_pred EEEecCCCEEEEEeCC-C-----eEEEeCCCCcccEEcCc
Confidence 33333 4578887652 1 23333334578998764
No 221
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=91.90 E-value=0.74 Score=56.15 Aligned_cols=12 Identities=8% Similarity=0.385 Sum_probs=8.7
Q ss_pred eEeeCCCCCeEE
Q 010571 6 WHLELPYDLWVT 17 (507)
Q Consensus 6 ~~~d~~~~~W~~ 17 (507)
|.+|+..+.|..
T Consensus 1252 y~~~~~~~~w~~ 1263 (3245)
T 3vkg_A 1252 YSVSIDDANWSL 1263 (3245)
T ss_dssp EEECTTTCSEEE
T ss_pred EEEECCCCeeee
Confidence 566777888874
No 222
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.88 E-value=14 Score=38.60 Aligned_cols=186 Identities=12% Similarity=0.100 Sum_probs=89.9
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++.+++.|+.+ ..+.++|+.++.-...-. + . ...-.++.+ ++..++.|+.+ ..+.++|+..
T Consensus 441 ~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~-~--h--~~~v~~~~~s~~~~~l~s~s~D------~~i~iwd~~~ 503 (694)
T 3dm0_A 441 DGQFALSGSWD------GELRLWDLAAGVSTRRFV-G--H--TKDVLSVAFSLDNRQIVSASRD------RTIKLWNTLG 503 (694)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEE-C--C--SSCEEEEEECTTSSCEEEEETT------SCEEEECTTS
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcceeEEe-C--C--CCCEEEEEEeCCCCEEEEEeCC------CEEEEEECCC
Confidence 56677777643 348899988875433211 1 0 111122222 44566666654 2477788654
Q ss_pred CcEEEeecCCCCCCCCCCceEEEE-cCc--EEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALH-ANR--YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 252 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~-~~~--~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 252 (507)
..-..+...+ ...+....++.+ .++ .+++.|+.+ ..+.++|+.+..-...- ........++.+
T Consensus 504 ~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~-----~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 504 ECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRSTL-----AGHTGYVSTVAVSP 571 (694)
T ss_dssp CEEEEECSST--TSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEEE-----CCCSSCEEEEEECT
T ss_pred CcceeeccCC--CCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEEE-----cCCCCCEEEEEEeC
Confidence 4322222111 111111223333 222 356666654 45888998876544321 111112223333
Q ss_pred CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 253 DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 253 ~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
++.+++.||.++ .+.++|+.+..- +..+.. ......+.+..+..+++.+. + ..+.++|+.+
T Consensus 572 dg~~l~sg~~Dg-----~i~iwd~~~~~~--~~~~~~-------~~~v~~~~~sp~~~~l~~~~-~----~~i~iwd~~~ 632 (694)
T 3dm0_A 572 DGSLCASGGKDG-----VVLLWDLAEGKK--LYSLEA-------NSVIHALCFSPNRYWLCAAT-E----HGIKIWDLES 632 (694)
T ss_dssp TSSEEEEEETTS-----BCEEEETTTTEE--EECCBC-------SSCEEEEEECSSSSEEEEEE-T----TEEEEEETTT
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCce--EEEecC-------CCcEEEEEEcCCCcEEEEEc-C----CCEEEEECCC
Confidence 467777777543 367888877642 222211 11233334444444444443 2 3477788765
Q ss_pred C
Q 010571 333 R 333 (507)
Q Consensus 333 ~ 333 (507)
.
T Consensus 633 ~ 633 (694)
T 3dm0_A 633 K 633 (694)
T ss_dssp T
T ss_pred C
Confidence 4
No 223
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=91.85 E-value=0.86 Score=55.62 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=7.1
Q ss_pred EEEECCCCceeEe
Q 010571 56 QVFDLRSLAWSNL 68 (507)
Q Consensus 56 ~~~d~~t~~W~~~ 68 (507)
|.+|+.++.|...
T Consensus 1252 y~~~~~~~~w~~W 1264 (3245)
T 3vkg_A 1252 YSVSIDDANWSLW 1264 (3245)
T ss_dssp EEECTTTCSEEET
T ss_pred EEEECCCCeeeeh
Confidence 3445556666553
No 224
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=91.84 E-value=2.4 Score=32.41 Aligned_cols=28 Identities=29% Similarity=0.201 Sum_probs=13.5
Q ss_pred HhhHhhhhhhhhhHHHHHHHHHHHHHhH
Q 010571 437 QGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 437 ~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
..+.+.+..+++.-|..+.++++...+.
T Consensus 44 k~qV~~L~~~~q~sE~~L~~Lqq~fsq~ 71 (112)
T 1x79_B 44 SHQISALVLRAQASEILLEELQQGLSQA 71 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555555544333
No 225
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.76 E-value=1.6 Score=42.65 Aligned_cols=149 Identities=13% Similarity=0.135 Sum_probs=68.6
Q ss_pred EEEEcCcCCCCCccCcEEEEEcCCC---cEEEeecCCCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 154 LIIFGGEDRSRKLLNDVHFLDLETM---TWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 154 l~~~GG~~~~~~~~~~~~~~d~~t~---~W~~~~~~g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
+++.|+.+ ..+.+||+.+. .+..............-++++... ++.+++.|+.+ ..|.+||+.+.
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~ 264 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNN 264 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCS
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 66777653 35888998762 222110000001111122233333 44466666654 46889998765
Q ss_pred c-EEeeeecCCCCCCCcceEEEEEC---CEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEE
Q 010571 230 E-WSQPEIKGDLVTGRAGHAGITID---ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII 305 (507)
Q Consensus 230 ~-W~~~~~~~~~p~~r~~~~~~~~~---~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~ 305 (507)
. ...+.. .........++.++ ..+++.|+.++ .+.+||+.+..= .+..+. .+......+..
T Consensus 265 ~~~~~~~~---~~~~~~~v~~i~~~p~~~~~l~tg~~dg-----~v~vwd~~~~~~-~~~~~~------~h~~~v~~i~~ 329 (430)
T 2xyi_A 265 NTSKPSHT---VDAHTAEVNCLSFNPYSEFILATGSADK-----TVALWDLRNLKL-KLHSFE------SHKDEIFQVQW 329 (430)
T ss_dssp CSSSCSEE---EECCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCTTS-CSEEEE------CCSSCEEEEEE
T ss_pred CCCcceeE---eecCCCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEeCCCCCC-CeEEee------cCCCCEEEEEE
Confidence 2 111000 00111122333342 34787877543 478888765310 011111 11122333333
Q ss_pred -cCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 306 -EGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 306 -~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
+.+..+++.||.+ ..+.++|+..
T Consensus 330 sp~~~~~l~s~~~d----~~i~iwd~~~ 353 (430)
T 2xyi_A 330 SPHNETILASSGTD----RRLHVWDLSK 353 (430)
T ss_dssp CSSCTTEEEEEETT----SCCEEEEGGG
T ss_pred CCCCCCEEEEEeCC----CcEEEEeCCC
Confidence 3334577777755 3577777754
No 226
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.65 E-value=18 Score=39.95 Aligned_cols=103 Identities=19% Similarity=0.207 Sum_probs=53.8
Q ss_pred CceE-EEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcE
Q 010571 53 SDVQ-VFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLC 129 (507)
Q Consensus 53 ~~~~-~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W 129 (507)
..++ ++|+.++....+. . .......+.+ +++.+++++.. ..++++|+.+++-
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~-----------------~~~~~~~~~~SpDG~~la~~~~~------~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--E-----------------NLGNVFAMGVDRNGKFAVVANDR------FEIMTVDLETGKP 412 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--C-----------------CCCSEEEEEECTTSSEEEEEETT------SEEEEEETTTCCE
T ss_pred CceEEEEECCCCCceEec--C-----------------CccceeeeEECCCCCEEEEECCC------CeEEEEECCCCce
Confidence 4678 8898877654433 1 1111222223 55555555432 3699999999887
Q ss_pred EEeecCCCCCCCcccceEEEECCEEEEEcCcCC----CCCccCcEEEEEcCCCcEEEe
Q 010571 130 GVMETSGKVPVARGGHSVTLVGSRLIIFGGEDR----SRKLLNDVHFLDLETMTWDAV 183 (507)
Q Consensus 130 ~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~----~~~~~~~~~~~d~~t~~W~~~ 183 (507)
..+... ........+..-+++.+++++.+. .....+.++.+|+.+.+...+
T Consensus 413 ~~~~~~---~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 413 TVIERS---REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp EEEEEC---SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred EEeccC---CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 666421 111111111122455445554422 011235799999998775444
No 227
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.58 E-value=7.8 Score=35.21 Aligned_cols=199 Identities=9% Similarity=-0.038 Sum_probs=97.1
Q ss_pred CCeEeeCCCC--CeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCc
Q 010571 4 GSWHLELPYD--LWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADK 78 (507)
Q Consensus 4 ~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~ 78 (507)
.+.++|+.+. .|+.-. +.....|++++. ++.+|+.+ .+.++.||+ ++. |+.-...
T Consensus 16 ~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G~~~W~~~~~~------- 75 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DGRELWNIAAPA------- 75 (276)
T ss_dssp EEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TSCEEEEEECCT-------
T ss_pred EEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CCCEEEEEcCCC-------
Confidence 3467787544 354432 111123444443 66777732 245999999 553 5432210
Q ss_pred cccCCccCCCCCccceeeEEE-CCEEEEEcccCCCCCCcceEEEEECCCCc-EEEeecCCCCCCC--cccceEEEECCEE
Q 010571 79 TEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPVA--RGGHSVTLVGSRL 154 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~g~~p~~--r~~~~~~~~~~~l 154 (507)
...-+++... ++++++..... ...++.+|+.... |+... .+..+.+ .........++.+
T Consensus 76 -----------~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~-~~~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 76 -----------GCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEF-ETGIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp -----------TCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEE-CCSCSSGGGSCSCCEECTTSCE
T ss_pred -----------CccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEec-cCCCCcccccccCceECCCCCE
Confidence 1122333333 56666654321 2357888874432 33322 1111111 1112223334555
Q ss_pred EEEcCcCCCCCccCcEEEEEcCCCc--EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc--
Q 010571 155 IIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE-- 230 (507)
Q Consensus 155 ~~~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~-- 230 (507)
++.... .+.+.+||+. ++ |+.-.. . ..+++....++.++|++..+ +.+..||+.+++
T Consensus 139 lv~~~~------~~~v~~~d~~-G~~~w~~~~~--~-----~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 139 LVPLFA------TSEVREIAPN-GQLLNSVKLS--G-----TPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIV 199 (276)
T ss_dssp EEEETT------TTEEEEECTT-SCEEEEEECS--S-----CCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEE
T ss_pred EEEecC------CCEEEEECCC-CCEEEEEECC--C-----CccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEE
Confidence 554321 3469999987 44 654331 1 12345556666677776542 458999998665
Q ss_pred EEeeeecCCCCCCCc-ceE-EEEE-CCEEEEEe
Q 010571 231 WSQPEIKGDLVTGRA-GHA-GITI-DENWYIVG 260 (507)
Q Consensus 231 W~~~~~~~~~p~~r~-~~~-~~~~-~~~l~v~G 260 (507)
|+.-. ...+..+. ..+ ++.. ++.+||..
T Consensus 200 w~~~~--~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 200 RRVNA--NDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEG--GGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEecC--CCCCCccccccccceEcCCCCEEEEe
Confidence 66532 11222222 223 3333 67888776
No 228
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=91.57 E-value=2.5 Score=34.56 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=27.3
Q ss_pred hhhhhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHH
Q 010571 445 SRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 445 ~~~~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~~~~ 486 (507)
++..+.+.+|..++.+++... ..++....+++.+..++.++.
T Consensus 70 qrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~ 115 (155)
T 2efr_A 70 QKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELY 115 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566667777777766665 556666777777776666654
No 229
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=91.52 E-value=2.2 Score=33.00 Aligned_cols=67 Identities=13% Similarity=0.186 Sum_probs=29.5
Q ss_pred chhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHH
Q 010571 387 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQ 453 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~ 453 (507)
+......++.+..+.++.+..+-.-..+-+.+++.+++.+-.-++|+-.++.++...+...++.+..
T Consensus 16 L~~D~~s~~~eleEnqeEL~iVgkML~EEqgKVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~ 82 (167)
T 4gkw_A 16 LKQDTESLQKQLEENQEELEIVGNMLREEQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQL 82 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3333444444444444433333333333344444444444444455555555555555444444433
No 230
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=91.51 E-value=11 Score=37.03 Aligned_cols=188 Identities=17% Similarity=0.200 Sum_probs=97.5
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCc
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~ 179 (507)
++++|+|-|. ..|.||..+.+.....-. .+| . --++....+++|+|-|. ..+.||..+.+
T Consensus 158 ~~~~yfFkG~--------~yw~yd~~~~~~~~~~w~-gi~--~-iDAA~~~~g~~YfFkG~--------~y~rfd~~~~~ 217 (460)
T 1qhu_A 158 DEGILFFQGN--------RKWFWDLTTGTKKERSWP-AVG--N-CTSALRWLGRYYCFQGN--------QFLRFNPVSGE 217 (460)
T ss_dssp SSEEEEEETT--------EEEEEETTTTEEEEECCT-TSC--C-CSEEEEETTEEEEEETT--------EEEEECTTTCC
T ss_pred CCeEEEEecc--------cEEEEecccceeecccCC-CCC--c-cchheeeCCceEEEECC--------EEEEEcCccCc
Confidence 6788988873 489999998866543221 122 2 34555567899999774 46667664432
Q ss_pred ------------EEEeecCC------------C---CCCCCCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECCCCcE
Q 010571 180 ------------WDAVEVTQ------------T---PPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 180 ------------W~~~~~~g------------~---~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
|..++..| . .+.+....-++.. .++.+|+|-| +..|+++.....+
T Consensus 218 v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~ 290 (460)
T 1qhu_A 218 VPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGW 290 (460)
T ss_dssp CCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCC
T ss_pred ccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCc
Confidence 21111100 0 0111112223333 4667999988 4566666543322
Q ss_pred Eeeeec---CCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCC------CCCC--CCCCce
Q 010571 232 SQPEIK---GDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGR------NPLA--SEGLSV 300 (507)
Q Consensus 232 ~~~~~~---~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~------~p~~--~~~~~~ 300 (507)
....+. +.+|.. --++...++.+|+|=|. .+|+|+..+. .+.++..|.. .|.. ..+..
T Consensus 291 ~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG~-------~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~ID- 359 (460)
T 1qhu_A 291 HSWPIAHQWPQGPST--VDAAFSWEDKLYLIQDT-------KVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVD- 359 (460)
T ss_dssp CCEEGGGTCTTSCSS--CSEEEEETTEEEEEETT-------EEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCC-
T ss_pred CccchhhhccCCCCC--CcEEEEECCeEEEEeCC-------EEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCccc-
Confidence 111111 223322 33555668899999652 5788886532 2222211110 1111 11122
Q ss_pred EEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 301 CSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 301 ~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
+++....++.+|+|-| +..|.||..
T Consensus 360 AA~~~~~~~ktyfFkG------~~ywryd~~ 384 (460)
T 1qhu_A 360 AAFVCPGSSRLHIMAG------RRLWWLDLK 384 (460)
T ss_dssp EEECCTTCCEEEEEET------TEEEEEEGG
T ss_pred EEEEeCCCCEEEEEEC------CEEEEEECC
Confidence 2223345567888877 568999976
No 231
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.37 E-value=13 Score=37.38 Aligned_cols=142 Identities=8% Similarity=0.054 Sum_probs=67.9
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
+++.++.|+.+ ..+.+||.....-..+. ... ....++.+ ++..++.|+.+ ..+..||...
T Consensus 396 dg~~l~~~~~d------~~v~~~~~~~~~~~~~~---~~~---~~v~~~~~s~d~~~l~~~~~d------~~v~~w~~~~ 457 (577)
T 2ymu_A 396 DGQTIASASDD------KTVKLWNRNGQLLQTLT---GHS---SSVWGVAFSPDDQTIASASDD------KTVKLWNRNG 457 (577)
T ss_dssp TSSCEEEEETT------SEEEEECTTCCEEEEEE---CCS---SCEEEEEECTTSSEEEEEETT------SEEEEEETTS
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCEEEEec---CCC---CCeEEEEECCCCCEEEEEcCC------CEEEEEECCC
Confidence 45566666542 24777875443333332 111 11122222 45566666543 2578888755
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN 255 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 255 (507)
..-..+.. ....-.+++...++.+++.|+.+ ..+.++|.....-..+. + ....-.++.+ +++
T Consensus 458 ~~~~~~~~-----~~~~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~~--~----h~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 458 QLLQTLTG-----HSSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLT--G----HSSSVRGVAFSPDGQ 521 (577)
T ss_dssp CEEEEEEC-----CSSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEEE--C----CSSCEEEEEECTTSS
T ss_pred CEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEEe--C----CCCCEEEEEEcCCCC
Confidence 44433331 11112234444566677777654 35778886543333321 1 1111122233 556
Q ss_pred EEEEeccCCCCCcceEEEEEcCcCe
Q 010571 256 WYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 256 l~v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
+++.|+.++ .+.+||.....
T Consensus 522 ~l~s~~~dg-----~v~lwd~~~~~ 541 (577)
T 2ymu_A 522 TIASASDDK-----TVKLWNRNGQL 541 (577)
T ss_dssp CEEEEETTS-----EEEEECTTSCE
T ss_pred EEEEEECcC-----EEEEEeCCCCE
Confidence 777776443 47778865443
No 232
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=91.35 E-value=8.5 Score=35.22 Aligned_cols=63 Identities=11% Similarity=0.101 Sum_probs=32.8
Q ss_pred CEEEEEcccCCCCCCcceEEEEECCCC-------cEEEeecCCCCCCCcccceEEEE--C--CEEEEEcCcCCCCCccCc
Q 010571 101 TKLLILGGHYKKSSDSMIVRFIDLETN-------LCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 101 ~~iyv~GG~~~~~~~~~~~~~~d~~t~-------~W~~~~~~g~~p~~r~~~~~~~~--~--~~l~~~GG~~~~~~~~~~ 169 (507)
+.+++.|+.+. .+.+||+.+. .|..+.. ..........+.+ + +.+++.|+.+ ..
T Consensus 71 ~~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~ 135 (351)
T 3f3f_A 71 GRIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCT---LNDSKGSLYSVKFAPAHLGLKLACLGND------GI 135 (351)
T ss_dssp CSEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT------CE
T ss_pred CCEEEEEcCCC------eEEEEecCCCcccccccCcceeee---ecccCCceeEEEEcCCCCCcEEEEecCC------Cc
Confidence 66777776532 3777777654 3444432 1111112222233 2 5566666643 35
Q ss_pred EEEEEcCCC
Q 010571 170 VHFLDLETM 178 (507)
Q Consensus 170 ~~~~d~~t~ 178 (507)
+.+||+.+.
T Consensus 136 v~iwd~~~~ 144 (351)
T 3f3f_A 136 LRLYDALEP 144 (351)
T ss_dssp EEEEECSST
T ss_pred EEEecCCCh
Confidence 888888654
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=91.35 E-value=12 Score=36.82 Aligned_cols=181 Identities=10% Similarity=-0.030 Sum_probs=80.2
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCC----ceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSL----AWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~----~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 112 (507)
...||+-|.. .+.+++||..++ +-.+.-..... ....+ ..+-.+..|.-++ |||-.-.+..
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~----~~~~g-----~s~Ph~~~~~pdG-i~Vs~~g~~~ 159 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEV----KKVSG-----YSRLHTVHCGPDA-IYISALGNEE 159 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHH----HHHHC-----EEEEEEEEECSSC-EEEEEEEETT
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhc----ccccC-----CCcccceeECCCe-EEEEcCCCcC
Confidence 5667777663 477999998776 22221100000 00000 0122223333456 7774322222
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEc---------CcCCCC---CccCcEEEEEcCCC
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFG---------GEDRSR---KLLNDVHFLDLETM 178 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~G---------G~~~~~---~~~~~~~~~d~~t~ 178 (507)
......+.++|..|.+=...-..+..|.. .++-...- ++.+|.-- |..... .+.+.|++||+.++
T Consensus 160 g~~~g~v~vlD~~T~~v~~~~~~~~~~~~-~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 160 GEGPGGILMLDHYSFEPLGKWEIDRGDQY-LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp SCSCCEEEEECTTTCCEEEECCSBCTTCC-CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CCCCCeEEEEECCCCeEEEEEccCCCCcc-ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 23356799999998764433221222211 12212222 33444431 222221 34678999999886
Q ss_pred cEEEeecCCC-CCCCCCCceEEE-E-cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeee
Q 010571 179 TWDAVEVTQT-PPAPRYDHSAAL-H-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 179 ~W~~~~~~g~-~p~~r~~~~~~~-~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
+-..--..|. ...|| |.... . .+.++||..-.+.....+.+++|....+.|....
T Consensus 239 k~~~tI~vg~~g~~P~--~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 239 KRIHSLTLGEENRMAL--ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp EEEEEEESCTTEEEEE--EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred cEeeEEecCCCCCccc--eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 4322111110 00011 11111 1 2345666554222223356666555557787654
No 234
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.28 E-value=9.4 Score=35.58 Aligned_cols=192 Identities=14% Similarity=0.105 Sum_probs=96.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
++.+++.||.+ ..+.+||..++.-...-..... . .....+. ...+..++.|.++-. .
T Consensus 47 d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~~~~v-----~----~~~~~~~--~~s~s~D~~i~~w~~-------~ 103 (343)
T 3lrv_A 47 DKWVCMCRCED-----GALHFTQLKDSKTITTITTPNP-----R----TGGEHPA--IISRGPCNRLLLLYP-------G 103 (343)
T ss_dssp EEEEEEEEEET-----TEEEEEEESSSSCEEEEEEECC-----C----TTCCCCS--EEEECSTTEEEEEET-------T
T ss_pred CCCEEEEECCC-----CcEEEEECCCCcEEEEEecCCc-----e----eeeeCCc--eEEecCCCeEEEEEc-------c
Confidence 46677777743 4588888887653222111100 0 0000011 222233566666643 2
Q ss_pred ceEEEEECCCCcE-EEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 117 MIVRFIDLETNLC-GVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 117 ~~~~~~d~~t~~W-~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
..+..||..+..- ..... +....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-..... ....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~---~~~~ 170 (343)
T 3lrv_A 104 NQITILDSKTNKVLREIEV----DSANEIIYMYGHNEVNTEYFIWADNR------GTIGFQSYEDDSQYIVHS---AKSD 170 (343)
T ss_dssp TEEEEEETTTCCEEEEEEC----CCSSCEEEEECCC---CCEEEEEETT------CCEEEEESSSSCEEEEEC---CCSS
T ss_pred CceEEeecCCcceeEEeec----CCCCCEEEEEcCCCCCCCEEEEEeCC------CcEEEEECCCCcEEEEEe---cCCC
Confidence 2467788877762 22221 111111111111 44566767753 358999998887644431 1112
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEE--eeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCc
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS--QPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGC 268 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~--~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~ 268 (507)
....+++...++.+++.|+.+ ..+.+||+.+..-. .+. + . ....-.++.+ ++..++.|+ ++
T Consensus 171 ~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~~~~~~--~--~-h~~~v~~l~fs~~g~~l~s~~-~~---- 235 (343)
T 3lrv_A 171 VEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQASSRFP--V--D-EEAKIKEVKFADNGYWMVVEC-DQ---- 235 (343)
T ss_dssp CCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSCCEECC--C--C-TTSCEEEEEECTTSSEEEEEE-SS----
T ss_pred CceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCCccEEe--c--c-CCCCEEEEEEeCCCCEEEEEe-CC----
Confidence 223345555677677777765 46889998876532 211 1 0 1112233333 456666666 22
Q ss_pred ceEEEEEcCcCe
Q 010571 269 QETIVLNMTKLA 280 (507)
Q Consensus 269 ~d~~~~d~~~~~ 280 (507)
.+.++|+.+..
T Consensus 236 -~v~iwd~~~~~ 246 (343)
T 3lrv_A 236 -TVVCFDLRKDV 246 (343)
T ss_dssp -BEEEEETTSST
T ss_pred -eEEEEEcCCCC
Confidence 57889987653
No 235
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.22 E-value=8.3 Score=34.88 Aligned_cols=227 Identities=9% Similarity=0.043 Sum_probs=100.9
Q ss_pred ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCC
Q 010571 36 FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSD 115 (507)
Q Consensus 36 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 115 (507)
.++.+++.|+.+ ..+.+||+.++.-........ ......+...++.+++.|+.+.
T Consensus 27 ~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~----------------~~v~~~~~~~~~~~l~~~~~dg---- 81 (313)
T 3odt_A 27 VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTGQ----------------GFLNSVCYDSEKELLLFGGKDT---- 81 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEEESSSEEEEEEEECS----------------SCEEEEEEETTTTEEEEEETTS----
T ss_pred cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecCC----------------ccEEEEEECCCCCEEEEecCCC----
Confidence 445556666633 458889987765433322110 1111122222566677776532
Q ss_pred cceEEEEECCCCc-EEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCC
Q 010571 116 SMIVRFIDLETNL-CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 116 ~~~~~~~d~~t~~-W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~ 194 (507)
.+.+++..+.. ...+. .+........++.+++..++.|+.+ ..+..||.......... . ...
T Consensus 82 --~i~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~---~---~~~ 144 (313)
T 3odt_A 82 --MINGVPLFATSGEDPLY---TLIGHQGNVCSLSFQDGVVISGSWD------KTAKVWKEGSLVYNLQA---H---NAS 144 (313)
T ss_dssp --CEEEEETTCCTTSCC-C---EECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTEEEEEEEC---C---SSC
T ss_pred --eEEEEEeeecCCCCccc---chhhcccCEEEEEecCCEEEEEeCC------CCEEEEcCCcEEEeccc---C---CCc
Confidence 26667665431 11111 1111112223333455566666643 35888883222222111 1 111
Q ss_pred CceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEE-EECCEEEEEeccCCCCCcceEE
Q 010571 195 DHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGI-TIDENWYIVGGGDNNNGCQETI 272 (507)
Q Consensus 195 ~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~d~~ 272 (507)
..++.... ++..++.|+.+ ..+.+||..... ..+ . .+......+++ .-++. ++.|+.++ .+.
T Consensus 145 v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~-~~~---~-~~~~~~i~~~~~~~~~~-~~~~~~dg-----~i~ 208 (313)
T 3odt_A 145 VWDAKVVSFSENKFLTASAD-----KTIKLWQNDKVI-KTF---S-GIHNDVVRHLAVVDDGH-FISCSNDG-----LIK 208 (313)
T ss_dssp EEEEEEEETTTTEEEEEETT-----SCEEEEETTEEE-EEE---C-SSCSSCEEEEEEEETTE-EEEEETTS-----EEE
T ss_pred eeEEEEccCCCCEEEEEECC-----CCEEEEecCceE-EEE---e-ccCcccEEEEEEcCCCe-EEEccCCC-----eEE
Confidence 12233333 34466666654 357788833211 111 1 11111112222 23556 66665433 588
Q ss_pred EEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 273 VLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 273 ~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
+||+.+..-.. .+... ......+.+..+.. ++.||.+ ..+..+|+.+.
T Consensus 209 i~d~~~~~~~~--~~~~~------~~~i~~~~~~~~~~-l~~~~~d----g~v~iwd~~~~ 256 (313)
T 3odt_A 209 LVDMHTGDVLR--TYEGH------ESFVYCIKLLPNGD-IVSCGED----RTVRIWSKENG 256 (313)
T ss_dssp EEETTTCCEEE--EEECC------SSCEEEEEECTTSC-EEEEETT----SEEEEECTTTC
T ss_pred EEECCchhhhh--hhhcC------CceEEEEEEecCCC-EEEEecC----CEEEEEECCCC
Confidence 89987664322 11111 11223334443333 5556644 46788887654
No 236
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=91.22 E-value=3.6 Score=40.10 Aligned_cols=79 Identities=10% Similarity=0.201 Sum_probs=37.5
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhh-hhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSR-CFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
-++..++.+.+.+.++.+++.|.+.+++.+...+.. .+++++..+++.+=-+.+.+-++++..+++.+.+..+++.+++
T Consensus 28 aka~Ye~~~ae~~a~n~~i~aeNeaikkrNa~aka~Ye~~l~kY~~dlakY~~~~AeY~~kl~aYe~~~~~~~k~lae~e 107 (497)
T 3iox_A 28 AKAAYEAAVAANNAANAALTAENTAIKKRNADAKADYEAKLAKYQADLAKYQKDLADYPVKLKAYEDEQTSIKAALAELE 107 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444445555555555555555555555444322 1222332333322222233555566666666666666665443
No 237
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=91.10 E-value=0.95 Score=31.99 Aligned_cols=16 Identities=6% Similarity=-0.035 Sum_probs=6.4
Q ss_pred HHHHHhhHhhhhhhhh
Q 010571 433 LSSVQGQLVAERSRCF 448 (507)
Q Consensus 433 ~~~~~~~~~~~~~~~~ 448 (507)
|..++..+...+.+++
T Consensus 33 Ls~vr~~ni~~eskL~ 48 (81)
T 1wt6_A 33 MEAIRTDNQNFASQLR 48 (81)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444333333
No 238
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.95 E-value=12 Score=36.01 Aligned_cols=196 Identities=13% Similarity=0.071 Sum_probs=99.5
Q ss_pred CCCeEeeCCC--CCeEEeccCCCCCCccccceEEEE---CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccC
Q 010571 3 SGSWHLELPY--DLWVTLPVSGARPSPRYKHAAAVF---DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDAD 77 (507)
Q Consensus 3 ~~~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~ 77 (507)
.++++|+... ..|..+.. .+....-+++++. .+.||+.+... ..-..+++.+-...+|+.+......
T Consensus 31 ~Gl~~~~~~~~g~~W~~~~~---~~~~~~v~~i~~dp~~~~~l~~g~~~g--~~g~gl~~s~D~G~tW~~~~~~~~~--- 102 (394)
T 3b7f_A 31 KGAWFLASDPARRTWELRGP---VFLGHTIHHIVQDPREPERMLMAARTG--HLGPTVFRSDDGGGNWTEATRPPAF--- 102 (394)
T ss_dssp TEEEEEEECTTSCSEEEEEE---ESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCC---
T ss_pred CceEEEECCCCCCCceECCc---cCCCCceEEEEECCCCCCeEEEEecCC--CCCccEEEeCCCCCCceECCccccC---
Confidence 4677888765 78998741 1112223444443 46788765321 0112477776667899987642110
Q ss_pred ccccCCccCCCCCc-----cce--eeEEE----CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCC------
Q 010571 78 KTEDSGLLEVLPPM-----SDH--CMVKW----GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV------ 140 (507)
Q Consensus 78 ~~~~~~~~~~p~~r-----~~~--~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~------ 140 (507)
.....+ ..+ +++.. .+.||+.+. ..-+++.+-...+|+.+......|.
T Consensus 103 --------~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~ 167 (394)
T 3b7f_A 103 --------NKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTG 167 (394)
T ss_dssp --------CCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHC
T ss_pred --------CCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCcccccccc
Confidence 000111 111 22222 456776542 1237888777889998752111121
Q ss_pred -------CcccceEEEEC----CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCC---CCCCC-----CCCceEEEE
Q 010571 141 -------ARGGHSVTLVG----SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ---TPPAP-----RYDHSAALH 201 (507)
Q Consensus 141 -------~r~~~~~~~~~----~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g---~~p~~-----r~~~~~~~~ 201 (507)
.......+.++ +.||+..+. ..+++.+-...+|+.+.... .+|.+ ...+.++..
T Consensus 168 ~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~ 240 (394)
T 3b7f_A 168 GEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQH 240 (394)
T ss_dssp CC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEEC
T ss_pred ccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEEC
Confidence 01111223332 456665321 24777766778999875311 11211 122344443
Q ss_pred cC--cEEEEEeCCCCCcCCCcEEEEECCCCcEEeee
Q 010571 202 AN--RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 202 ~~--~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
.. +.||+..+ ..+++.+-...+|+.+.
T Consensus 241 ~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~~ 269 (394)
T 3b7f_A 241 PAAPDILYQQNH-------CGIYRMDRREGVWKRIG 269 (394)
T ss_dssp SSSTTEEEEEET-------TEEEEEETTTTEEECGG
T ss_pred CCCCCEEEEEcC-------CeEEEeCCCCCcceECC
Confidence 33 55666332 34888887888999874
No 239
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=90.93 E-value=1.2 Score=44.76 Aligned_cols=12 Identities=33% Similarity=0.556 Sum_probs=4.9
Q ss_pred EEEEECCCCcEE
Q 010571 119 VRFIDLETNLCG 130 (507)
Q Consensus 119 ~~~~d~~t~~W~ 130 (507)
+..+|...+...
T Consensus 82 L~~L~Ls~N~l~ 93 (487)
T 3oja_A 82 LRTLDLNNNYVQ 93 (487)
T ss_dssp CCEEECCSSEEE
T ss_pred CCEEEecCCcCC
Confidence 334444444333
No 240
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=90.85 E-value=1 Score=32.54 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=18.7
Q ss_pred HHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHH
Q 010571 419 IDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 419 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
++..+..+.+.++.......++..++++++.++..+...++++.
T Consensus 22 ~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~ 65 (81)
T 1ic2_A 22 AEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLK 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333444444444444454444444444433333
No 241
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=90.63 E-value=11 Score=35.06 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=55.5
Q ss_pred CEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE---CCEEEEEcccCCCCC
Q 010571 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW---GTKLLILGGHYKKSS 114 (507)
Q Consensus 38 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~ 114 (507)
+.+++.|+.+ ..+.+||+.++.-...-.. ......++.+ ++.+++.|+.+.
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~------------------~~~~i~~~~~~~~~~~~l~s~~~dg--- 138 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVG------------------HGNAINELKFHPRDPNLLLSVSKDH--- 138 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEES------------------CCSCEEEEEECSSCTTEEEEEETTS---
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecC------------------CCCcEEEEEECCCCCCEEEEEeCCC---
Confidence 4677777743 4588999887653322111 1111222222 556777776532
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
.+.+||..+++-..... ..........++.+ ++..++.|+.+ ..+.+||+.+.
T Consensus 139 ---~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~ 193 (366)
T 3k26_A 139 ---ALRLWNIQTDTLVAIFG--GVEGHRDEVLSADYDLLGEKIMSCGMD------HSLKLWRINSK 193 (366)
T ss_dssp ---CEEEEETTTTEEEEEEC--STTSCSSCEEEEEECTTSSEEEEEETT------SCEEEEESCSH
T ss_pred ---eEEEEEeecCeEEEEec--ccccccCceeEEEECCCCCEEEEecCC------CCEEEEECCCC
Confidence 48899998876544321 11112222223333 34566666653 35888888764
No 242
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.61 E-value=11 Score=35.04 Aligned_cols=143 Identities=14% Similarity=0.132 Sum_probs=72.1
Q ss_pred CEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCC
Q 010571 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSD 115 (507)
Q Consensus 38 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 115 (507)
+.+++.|+.+ ..+.+||..+........... .......+.+ ++..++.|+.+
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~l~s~~~d----- 107 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQM----------------HTGPVLDVCWSDDGSKVFTASCD----- 107 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEE----------------CSSCEEEEEECTTSSEEEEEETT-----
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEecc----------------ccCCEEEEEECcCCCEEEEEcCC-----
Confidence 4788887743 458889988733322111110 1111222223 55566666543
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEE---ECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL---VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~---~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
..+.+||..+....... ....+ -.++.. -++.+++.|+.+ ..+.+||+.+.+-...-. .+
T Consensus 108 -g~v~iwd~~~~~~~~~~---~~~~~--v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~---~~-- 170 (368)
T 3mmy_A 108 -KTAKMWDLSSNQAIQIA---QHDAP--VKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPMMVLQ---LP-- 170 (368)
T ss_dssp -SEEEEEETTTTEEEEEE---ECSSC--EEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCSEEEE---CS--
T ss_pred -CcEEEEEcCCCCceeec---cccCc--eEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEEEEEe---cC--
Confidence 35889999988765543 11111 112222 245777777753 358899987765322211 11
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
....++. .....+++.++ + ..+.+|++....
T Consensus 171 ~~~~~~~-~~~~~~~~~~~-~-----~~i~~~~~~~~~ 201 (368)
T 3mmy_A 171 ERCYCAD-VIYPMAVVATA-E-----RGLIVYQLENQP 201 (368)
T ss_dssp SCEEEEE-EETTEEEEEEG-G-----GCEEEEECSSSC
T ss_pred CCceEEE-ecCCeeEEEeC-C-----CcEEEEEecccc
Confidence 1112222 33443444333 2 457888887654
No 243
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.59 E-value=16 Score=36.97 Aligned_cols=111 Identities=13% Similarity=0.165 Sum_probs=57.5
Q ss_pred EEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcC-cEEEEEeCCCCCcCCCcEEEEECCCCcEE
Q 010571 154 LIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 154 l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~~l~i~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
+++.|+.+ ..+.+||+.+.+-...-. +.......-.+++...+ +.+++.|+.+ ..+.+||+.+....
T Consensus 175 ~l~~~~~d------~~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 175 RSMTVGDD------GSVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEETT------TEEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETTTCCEE
T ss_pred EEEEEeCC------CcEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCEe
Confidence 66776643 368889987765433221 11000001223344445 5577777754 46899998877654
Q ss_pred eeeecCCCCCCCcceEEEEE-CCEEEEEeccCCCCCcceEEEEEcCcCeeE
Q 010571 233 QPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 233 ~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~ 282 (507)
..-...... .......+.+ ++..++.|+.++ .+.+||+.+..-.
T Consensus 243 ~~~~~~~~~-~~~~v~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 243 KYIEDDQEP-VQGGIFALSWLDSQKFATVGADA-----TIRVWDVTTSKCV 287 (615)
T ss_dssp EECCBTTBC-CCSCEEEEEESSSSEEEEEETTS-----EEEEEETTTTEEE
T ss_pred EEecccccc-cCCceEEEEEcCCCEEEEEcCCC-----cEEEEECCCCcEE
Confidence 421000001 1111122222 667777776442 4788998876544
No 244
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=90.49 E-value=4.7 Score=30.79 Aligned_cols=78 Identities=10% Similarity=0.126 Sum_probs=48.5
Q ss_pred hhhHHhhHHHHHHHHHhhHHHHh----hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHh
Q 010571 388 RTDIDAIKEDKRVLELSLTEVRT----ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 388 ~~~~~~l~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
......|..+...|+.++..... ....|+.+++.+....+.+.+.+.++...++.++....-.-..++.++.++-+
T Consensus 9 ~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~ 88 (111)
T 2v66_B 9 QADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQ 88 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHH
Confidence 34455566666666665554433 35557777777777777777777777777776666555555566666655544
Q ss_pred HH
Q 010571 464 SQ 465 (507)
Q Consensus 464 ~~ 465 (507)
+-
T Consensus 89 ai 90 (111)
T 2v66_B 89 AI 90 (111)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 245
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=90.44 E-value=2.6 Score=33.35 Aligned_cols=48 Identities=13% Similarity=0.162 Sum_probs=33.6
Q ss_pred HhhhhhhhhhHHHHHHHHHHHHHhHH-------HHHHHHHHHHHhHHHHHHHHHH
Q 010571 440 LVAERSRCFKLEAQIAELQKMLESSQ-------TIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 440 ~~~~~~~~~~~e~~~~e~~~~~~~~~-------~~e~e~~~~~~~~~~~~~~~~~ 487 (507)
+..-++....++..+.+.+.+|.+++ +++.++++++.+..+..+.++.
T Consensus 71 ~~sA~~~~d~lekKl~~aq~kL~~L~P~~P~Yak~~a~~~q~~~d~~~~~~~~~k 125 (158)
T 3tul_A 71 TDTAKSVYDAATKKLTQAQNKLQSLDPADPGYAQAEAAVEQAGKEATEAKEALDK 125 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777777888888888777 7888888888877766665544
No 246
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=90.31 E-value=2.8 Score=41.79 Aligned_cols=26 Identities=23% Similarity=0.396 Sum_probs=13.3
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHHH
Q 010571 462 ESSQTIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 462 ~~~~~~e~e~~~~~~~~~~~~~~~~~ 487 (507)
++.+++|.|+..+.++++.++-|+++
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (471)
T 3mq9_A 443 KKVEELEGEITTLNHKLQDASAEVER 468 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555543
No 247
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=90.28 E-value=1.5 Score=32.68 Aligned_cols=53 Identities=15% Similarity=0.235 Sum_probs=26.4
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHh
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
+..-|+..+++.++.+.+..++.++...+++.++.....++.++.+++.++++
T Consensus 31 qVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~q 83 (103)
T 4h22_A 31 QVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQ 83 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555555555555555444444444444444433
No 248
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=90.18 E-value=5.3 Score=30.86 Aligned_cols=49 Identities=12% Similarity=0.221 Sum_probs=22.9
Q ss_pred ccchhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhH
Q 010571 385 KDVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKEL 433 (507)
Q Consensus 385 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~ 433 (507)
..+..+.+..+++..++-..+.+.+.-..+|++.-....+++..++.|+
T Consensus 21 ~s~~~eleEnqeEL~iVgkML~EEqgKVDQlqKRn~~HQKEi~~Lrae~ 69 (167)
T 4gkw_A 21 ESLQKQLEENQEELEIVGNMLREEQGKVDQLQKRNVAHQKEIGKLRAEL 69 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 3444555555555555544444444444444444444444444443333
No 249
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=90.17 E-value=3 Score=31.11 Aligned_cols=15 Identities=13% Similarity=0.167 Sum_probs=6.0
Q ss_pred HHHHHHHhHHHHHHH
Q 010571 470 EVQILRQQKSAFEQE 484 (507)
Q Consensus 470 e~~~~~~~~~~~~~~ 484 (507)
++-+.+.+..+++.+
T Consensus 68 ql~e~~dE~~Sl~~q 82 (96)
T 3q8t_A 68 QQLELDDELKSVENQ 82 (96)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344444444433
No 250
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=89.99 E-value=12 Score=34.56 Aligned_cols=145 Identities=16% Similarity=0.142 Sum_probs=72.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-...-.. .......+.+ ++.+++.|+.+.
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~------------------h~~~v~~~~~~~~~~~l~s~s~D~--- 129 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRFVG------------------HKSDVMSVDIDKKASMIISGSRDK--- 129 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC------------------CSSCEEEEEECTTSCEEEEEETTS---
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEEcc------------------CCCcEEEEEEcCCCCEEEEEeCCC---
Confidence 44555566533 4588899988753221110 1111222223 466777776533
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--------CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecC
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--------GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVT 186 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--------~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~ 186 (507)
.+.+||.....-..+. +. . .....+.+ ++.+++.||.+ ..+..+|+.+.+-...- .
T Consensus 130 ---~i~vwd~~~~~~~~~~--~h-~---~~v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~~-~ 193 (319)
T 3frx_A 130 ---TIKVWTIKGQCLATLL--GH-N---DWVSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEADF-I 193 (319)
T ss_dssp ---CEEEEETTSCEEEEEC--CC-S---SCEEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEEE-C
T ss_pred ---eEEEEECCCCeEEEEe--cc-C---CcEEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhheee-c
Confidence 3777887654333322 11 0 01111111 22355556543 35888898776543321 1
Q ss_pred CCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcE
Q 010571 187 QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 187 g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
+. ...-.+++...++.+++.||.+ ..+.++|+.+..-
T Consensus 194 ~h---~~~v~~~~~sp~g~~l~s~~~d-----g~i~iwd~~~~~~ 230 (319)
T 3frx_A 194 GH---NSNINTLTASPDGTLIASAGKD-----GEIMLWNLAAKKA 230 (319)
T ss_dssp CC---CSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEE
T ss_pred CC---CCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 11 1111233444566677777765 4688999887653
No 251
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=89.98 E-value=12 Score=34.67 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=52.3
Q ss_pred cceEEEEECCCCcE-EEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCC--c-cCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 116 SMIVRFIDLETNLC-GVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRK--L-LNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 116 ~~~~~~~d~~t~~W-~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~--~-~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
...++++|+.++.. ..+. . + .....+...+.+++.+..+.... . ...++.+| ++++..+...
T Consensus 151 ~~~l~~~d~~~~~~~~~l~---~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----- 216 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFE---K-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----- 216 (347)
T ss_dssp EEEEEEEETTTTEEEEEEE---E-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-----
T ss_pred cceEEEEECCCCeEEeeec---C-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-----
Confidence 35799999999887 6654 2 2 22233334444555454332111 2 44688888 7777766531
Q ss_pred CCCCceEEEEcCcEEEEEeCCCC---CcCCCcEEEEECCCCcEEee
Q 010571 192 PRYDHSAALHANRYLIVFGGCSH---SIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~i~GG~~~---~~~~~~i~~~d~~~~~W~~~ 234 (507)
...... ..++..+++.+... ......++.+| ++.+..+
T Consensus 217 --~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 217 --VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp --ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred --cceeeE-CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 111222 33443343433222 12345789998 6666654
No 252
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=89.88 E-value=2.1 Score=30.53 Aligned_cols=26 Identities=15% Similarity=0.241 Sum_probs=9.9
Q ss_pred hHHHHHHhhccchhhHHhHHHHHhhH
Q 010571 415 FREKIDEVNSTHSELSKELSSVQGQL 440 (507)
Q Consensus 415 l~~~~~~~~~~~~~~~~e~~~~~~~~ 440 (507)
|..+|+.+-..++-++.|+.+.++++
T Consensus 11 LE~KIq~avdtI~lLqmEieELKekN 36 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKEKN 36 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334443333333333333333333
No 253
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=89.84 E-value=12 Score=34.42 Aligned_cols=194 Identities=14% Similarity=0.075 Sum_probs=88.7
Q ss_pred CCE-EEEEcCCCCCccCCceEEEEC-CCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCC
Q 010571 37 DQK-LYIVGGSRNGRFLSDVQVFDL-RSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~-lyv~GG~~~~~~~~~~~~~d~-~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 114 (507)
++. +++.|+.+ ..+.+||+ .++....+.... . ...-.+++...+.+++.|+.+
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~--------------~--~~~v~~l~~~~~~~l~s~~~d---- 121 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNNE--------------A--NLGICRICKYGDDKLIAASWD---- 121 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEECBSCC--------------C--CSCEEEEEEETTTEEEEEETT----
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEeccccC--------------C--CCceEEEEeCCCCEEEEEcCC----
Confidence 556 66667633 46889999 887654433200 0 111112222224455555532
Q ss_pred CcceEEEEECCCCc-------EEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCC-Cc--EEEee
Q 010571 115 DSMIVRFIDLETNL-------CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET-MT--WDAVE 184 (507)
Q Consensus 115 ~~~~~~~~d~~t~~-------W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t-~~--W~~~~ 184 (507)
..+.+||+.+.. ...+. .......-.++....+. ++.|+.+ ..+.+||+.+ .. .....
T Consensus 122 --~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~-l~~~~~d------~~i~i~d~~~~~~~~~~~~~ 189 (342)
T 1yfq_A 122 --GLIEVIDPRNYGDGVIAVKNLNSN---NTKVKNKIFTMDTNSSR-LIVGMNN------SQVQWFRLPLCEDDNGTIEE 189 (342)
T ss_dssp --SEEEEECHHHHTTBCEEEEESCSS---SSSSCCCEEEEEECSSE-EEEEEST------TEEEEEESSCCTTCCCEEEE
T ss_pred --CeEEEEcccccccccccccCCeee---EEeeCCceEEEEecCCc-EEEEeCC------CeEEEEECCccccccceeee
Confidence 347777765400 11111 12222222233333445 5555432 3689999887 43 32222
Q ss_pred cCCCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCC------c-EEeeeecCCCCC---CCcceEEEEE-
Q 010571 185 VTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTN------E-WSQPEIKGDLVT---GRAGHAGITI- 252 (507)
Q Consensus 185 ~~g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~------~-W~~~~~~~~~p~---~r~~~~~~~~- 252 (507)
. +....-.+++... ++.+++.|+.+ ..+.+++.... . -..+........ ....-.++.+
T Consensus 190 ~----~~~~~i~~i~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 260 (342)
T 1yfq_A 190 S----GLKYQIRDVALLPKEQEGYACSSID-----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS 260 (342)
T ss_dssp C----SCSSCEEEEEECSGGGCEEEEEETT-----SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC
T ss_pred c----CCCCceeEEEECCCCCCEEEEEecC-----CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc
Confidence 1 1111122333444 55577777754 34556555443 1 111111000000 0112223333
Q ss_pred -CCEEEEEeccCCCCCcceEEEEEcCcCee
Q 010571 253 -DENWYIVGGGDNNNGCQETIVLNMTKLAW 281 (507)
Q Consensus 253 -~~~l~v~GG~~~~~~~~d~~~~d~~~~~W 281 (507)
++.+++.|+.++ .+.+||+.+..-
T Consensus 261 ~~~~~l~~~~~dg-----~i~vwd~~~~~~ 285 (342)
T 1yfq_A 261 PRHKFLYTAGSDG-----IISCWNLQTRKK 285 (342)
T ss_dssp TTTCCEEEEETTS-----CEEEEETTTTEE
T ss_pred CCCCEEEEecCCc-----eEEEEcCccHhH
Confidence 456677776443 478999887754
No 254
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.76 E-value=8.5 Score=35.47 Aligned_cols=112 Identities=12% Similarity=0.100 Sum_probs=56.7
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE----CCEEEEEcCcCCCCCccCcEEEEEc
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~l~~~GG~~~~~~~~~~~~~~d~ 175 (507)
++++++.|+.+ ..+.+||+.++....+.. +......-.++.+ ++.+++.|+.+ ..+.++|+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~---l~gH~~~V~~v~~~~~~~~~~l~s~s~D------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIAD---LRGHEGPVWQVAWAHPMYGNILASCSYD------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEE---EECCSSCEEEEEECCGGGSSCEEEEETT------SCEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEE---EcCCCccEEEEEeCCCCCCCEEEEEECC------CEEEEEEC
Confidence 45666677643 247788877765433321 1111111122333 24666777654 25888998
Q ss_pred CCCcEEEeecCCCCCCCCCCceEEEEcC--cEEEEEeCCCCCcCCCcEEEEECCCC-cEEe
Q 010571 176 ETMTWDAVEVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTN-EWSQ 233 (507)
Q Consensus 176 ~t~~W~~~~~~g~~p~~r~~~~~~~~~~--~~l~i~GG~~~~~~~~~i~~~d~~~~-~W~~ 233 (507)
.+..|........ ....-.+++...+ +.+++.|+.+ ..+.++|+... .|..
T Consensus 89 ~~~~~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 89 ENGTWEKSHEHAG--HDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEV 142 (316)
T ss_dssp SSSCCCEEEEECC--CSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEE
T ss_pred CCCcceEEEEccC--CCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcce
Confidence 8877654432111 1111123333333 4466777655 35777777664 4653
No 255
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=89.58 E-value=22 Score=37.12 Aligned_cols=251 Identities=14% Similarity=0.003 Sum_probs=120.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCE-EEEEcccCCC---
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTK-LLILGGHYKK--- 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~--- 112 (507)
+++.++|+-..++.....++++|+.++......... .+....+-. +++ ||+.......
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-----------------~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD-----------------VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE-----------------EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC-----------------ceeccEEEe-CCCEEEEEEecCccccc
Confidence 455455433222222357999999999875542211 112223334 554 5444322110
Q ss_pred ---CCCcceEEEEECCCCcE--EEeecCCCCCC--CcccceEEE-ECC-EEEEEcCcCCCCCccCcEEEEEcCCC--cEE
Q 010571 113 ---SSDSMIVRFIDLETNLC--GVMETSGKVPV--ARGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLETM--TWD 181 (507)
Q Consensus 113 ---~~~~~~~~~~d~~t~~W--~~~~~~g~~p~--~r~~~~~~~-~~~-~l~~~GG~~~~~~~~~~~~~~d~~t~--~W~ 181 (507)
......++.++..+..= ..+. ..+. +....+... -++ +|++...... ..+.++.+|+.+. .|.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVF---GAIPAQHHRYVGATVTEDDRFLLISAANST---SGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEE---SCSGGGCCSEEEEEECTTSCEEEEEEESSS---SCCEEEEEETTSTTCCCE
T ss_pred ccccCCCcEEEEEECCCCcccceEEE---ecCCCCCeEEEEEEEcCCCCEEEEEEccCC---CCcEEEEEECCCCCCceE
Confidence 12245688888777542 1222 1121 111112222 133 4555433221 2368999998766 687
Q ss_pred EeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC---cEEeeeecCCCCCCCcceEEEEECCEEEE
Q 010571 182 AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN---EWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 182 ~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
.+... ...........++.+|+....+. ....|+.+|+.+. .|+.+.. .... .. +....++.|++
T Consensus 275 ~l~~~-----~~~~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~--~~~~--~~-~~s~~g~~lv~ 342 (693)
T 3iuj_A 275 TVQGD-----LDADVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIP--ERQQ--VL-TVHSGSGYLFA 342 (693)
T ss_dssp EEECS-----SSSCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEEC--CCSS--CE-EEEEETTEEEE
T ss_pred EEeCC-----CCceEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEec--CCCC--EE-EEEEECCEEEE
Confidence 77521 11112223344666888765432 2457999998764 4777532 2111 11 33344566655
Q ss_pred EeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEE-cCceEEEEEcccCCCcCCeEEEEECCCCCC
Q 010571 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 259 ~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~v~~~~~~~~~w 335 (507)
..-.+ ....++++|+.......+.. +.. +. ...+.. .++..|++ ...+......+|.||+.+...
T Consensus 343 ~~~~~---g~~~l~~~d~~g~~~~~l~~-p~~------~~-~~~~~~~~d~~~l~~-~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 343 EYMVD---ATARVEQFDYEGKRVREVAL-PGL------GS-VSGFNGKHDDPALYF-GFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEET---TEEEEEEECTTSCEEEEECC-SSS------SE-EEECCCCTTCSCEEE-EEECSSSCCEEEEECTTTCCE
T ss_pred EEEEC---CeeEEEEEECCCCeeEEeec-CCC------ce-EEeeecCCCCCEEEE-EecCCCCCCEEEEEECCCCeE
Confidence 43222 24578899988766555532 111 11 111111 12233332 222223456788888866543
No 256
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=89.49 E-value=4.6 Score=30.64 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010571 447 CFKLEAQIAELQKMLESSQTIENEVQILRQQKS 479 (507)
Q Consensus 447 ~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~ 479 (507)
+++++.+|..+.++|+ ++..++++++++.+
T Consensus 73 vqeLqgEI~~Lnq~Lq---~a~ae~erlr~~~~ 102 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQ---DASAEVERLRRENQ 102 (121)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHhhch
Confidence 4444444444444333 23334444444433
No 257
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=89.47 E-value=1.3 Score=37.23 Aligned_cols=11 Identities=27% Similarity=0.117 Sum_probs=4.3
Q ss_pred hHHHHHhhHhh
Q 010571 432 ELSSVQGQLVA 442 (507)
Q Consensus 432 e~~~~~~~~~~ 442 (507)
++...+.+++.
T Consensus 93 ql~akr~EL~a 103 (175)
T 3lay_A 93 QLISKRYEYNA 103 (175)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333444433
No 258
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.43 E-value=8.6 Score=39.09 Aligned_cols=191 Identities=10% Similarity=-0.018 Sum_probs=94.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 116 (507)
++.+++..+.. +.+.+||+.++....+...+ . ...+..-+++.+++++..... .
T Consensus 121 g~~~~~~s~~~-----~~~~l~d~~~g~~~~l~~~~-----------------~--~~~~~spDG~~la~~~~~~~~--~ 174 (582)
T 3o4h_A 121 GEAVVFTGATE-----DRVALYALDGGGLRELARLP-----------------G--FGFVSDIRGDLIAGLGFFGGG--R 174 (582)
T ss_dssp SSCEEEEEECS-----SCEEEEEEETTEEEEEEEES-----------------S--CEEEEEEETTEEEEEEEEETT--E
T ss_pred CCeEEEEecCC-----CCceEEEccCCcEEEeecCC-----------------C--ceEEECCCCCEEEEEEEcCCC--C
Confidence 55555555432 23447899888766655321 1 222333455555554433221 2
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCC
Q 010571 117 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 195 (507)
Q Consensus 117 ~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~ 195 (507)
..++++|+.++.+..+.. .+.. . ...+.- +++.++.+..+. ...++.+|+.+++.. +.. +. . ...
T Consensus 175 ~~i~~~d~~~g~~~~l~~---~~~~-~-~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~-~~~-~~-~--~~~ 240 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDS---GEGS-F-SSASISPGMKVTAGLETAR----EARLVTVDPRDGSVE-DLE-LP-S--KDF 240 (582)
T ss_dssp EEEEEEETTTCCCEEECC---SSCE-E-EEEEECTTSCEEEEEECSS----CEEEEEECTTTCCEE-ECC-CS-C--SHH
T ss_pred eEEEEEcCCCCCceEeec---CCCc-c-ccceECCCCCEEEEccCCC----eeEEEEEcCCCCcEE-Ecc-CC-C--cCh
Confidence 459999999999887741 1111 1 112221 444433333221 246999999998887 321 11 1 000
Q ss_pred ceEE--------EEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCC
Q 010571 196 HSAA--------LHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNG 267 (507)
Q Consensus 196 ~~~~--------~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~ 267 (507)
...+ ...++.+++.+..+ ..+.+|++ +.... .+.......++. ++++++.++... .
T Consensus 241 ~~~~~~~~~~~~~spdg~~~~~~~~~-----g~~~l~~~--g~~~~------~~~~~v~~~~~s-dg~~l~~~s~~~--~ 304 (582)
T 3o4h_A 241 SSYRPTAITWLGYLPDGRLAVVARRE-----GRSAVFID--GERVE------APQGNHGRVVLW-RGKLVTSHTSLS--T 304 (582)
T ss_dssp HHHCCSEEEEEEECTTSCEEEEEEET-----TEEEEEET--TEEEC------CCSSEEEEEEEE-TTEEEEEEEETT--E
T ss_pred hhhhhccccceeEcCCCcEEEEEEcC-----CcEEEEEE--CCeec------cCCCceEEEEec-CCEEEEEEcCCC--C
Confidence 1111 34555566655443 24667776 44332 111111112223 777776655322 2
Q ss_pred cceEEEEEcCcCeeEEe
Q 010571 268 CQETIVLNMTKLAWSIL 284 (507)
Q Consensus 268 ~~d~~~~d~~~~~W~~~ 284 (507)
...++.+|..+ ..+.+
T Consensus 305 p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 305 PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEEEEETTCC-EEECC
T ss_pred CCeEEEEcCCC-ceEEE
Confidence 34678887765 44443
No 259
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=89.24 E-value=3 Score=30.64 Aligned_cols=28 Identities=21% Similarity=0.369 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010571 464 SQTIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 464 ~~~~e~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
..+++.....+..++..++..+.+.+++
T Consensus 58 l~eaEe~~~~L~~~K~eLE~~l~el~~r 85 (89)
T 3bas_A 58 MKQLEDKVEELLSKNYHLENEVARLKKL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666666666666666655544
No 260
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=89.13 E-value=4.3 Score=31.69 Aligned_cols=35 Identities=11% Similarity=0.296 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHH
Q 010571 448 FKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFE 482 (507)
Q Consensus 448 ~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~ 482 (507)
...|..+.-+++.+...- +||.+++-|+.++.-+.
T Consensus 65 ~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLK 103 (119)
T 3ol1_A 65 EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLK 103 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555544433 56666777766666443
No 261
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=89.09 E-value=15 Score=34.66 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=38.9
Q ss_pred CCEEEEEeccCC-----CCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEE
Q 010571 253 DENWYIVGGGDN-----NNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFV 327 (507)
Q Consensus 253 ~~~l~v~GG~~~-----~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~ 327 (507)
++++|+....++ ....+.++++|+.+.+- +..++.. . .....+.+++.+||+.++ +.+.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i~~~------~-p~~ia~spdg~~l~v~n~------~~v~v 329 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARIPGR------D-ALSMTIDQQRNLMLTLDG------GNVNV 329 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEEECT------T-CCEEEEETTTTEEEEECS------SCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEEecC------C-eeEEEECCCCCEEEEeCC------CeEEE
Confidence 367888754111 11245799999988753 3333211 1 233345555667887553 77999
Q ss_pred EECCCC
Q 010571 328 MRLKPR 333 (507)
Q Consensus 328 ~~~~~~ 333 (507)
+|+.+.
T Consensus 330 ~D~~t~ 335 (361)
T 2oiz_A 330 YDISQP 335 (361)
T ss_dssp EECSSS
T ss_pred EECCCC
Confidence 998765
No 262
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=88.88 E-value=3.5 Score=37.21 Aligned_cols=75 Identities=21% Similarity=0.292 Sum_probs=42.7
Q ss_pred HhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhh----hhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHH
Q 010571 409 RTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRC----FKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~----~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~ 484 (507)
+++.++|+.+++.++.....|.+- +..+..+++.. ..-+.-...+++.|.+..++..+..++..+++.++++
T Consensus 23 r~~~eql~~~i~~L~~~ap~W~~a----q~al~rL~eq~g~~~~ds~~v~~~mq~~Le~Ere~~~~Rd~~a~~k~~Le~~ 98 (302)
T 3ibp_A 23 RQEQEQLQSRIQSLMQRAPVWLAA----QNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVDEE 98 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHChHHHHH----HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555555555554444332 22222333222 3334444666677777777777777888888888888
Q ss_pred HHH
Q 010571 485 MER 487 (507)
Q Consensus 485 ~~~ 487 (507)
.++
T Consensus 99 ier 101 (302)
T 3ibp_A 99 IER 101 (302)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 263
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=88.84 E-value=15 Score=34.08 Aligned_cols=160 Identities=11% Similarity=0.166 Sum_probs=74.6
Q ss_pred EEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCC
Q 010571 34 AVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYK 111 (507)
Q Consensus 34 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 111 (507)
...++ +++.|+.+ ..+.+||+.++.+..+..... . ........+.+ ++.+++.|+.+.
T Consensus 21 ~~s~~-~las~~~D-----~~i~lw~~~~~~~~~~~~~~~------------~--~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 21 DFSQG-ILATGSTD-----RKIKLVSVKYDDFTLIDVLDE------------T--AHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp EEETT-EEEEEESS-----SCEEEEECSSSCCEEEEEECT------------T--CCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccCCC-EEEEEcCC-----CEEEEEEecCCCeEEEEEEec------------C--CccCCEEEEEECCCCCEEEEEeCCC
Confidence 33455 66666633 458889988765544433210 0 01111222333 566777776532
Q ss_pred CCCCcceEEEEECCCC-----cEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC--CcEEE
Q 010571 112 KSSDSMIVRFIDLETN-----LCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET--MTWDA 182 (507)
Q Consensus 112 ~~~~~~~~~~~d~~t~-----~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t--~~W~~ 182 (507)
.+.+||.... .+..+.. +........++.+ ++..++.|+.+ ..+.++|+.. ..+..
T Consensus 81 ------~v~iw~~~~~~~~~~~~~~~~~---~~~h~~~V~~v~~sp~g~~las~s~D------~~v~iwd~~~~~~~~~~ 145 (330)
T 2hes_X 81 ------TVSIWAKEESADRTFEMDLLAI---IEGHENEVKGVAWSNDGYYLATCSRD------KSVWIWETDESGEEYEC 145 (330)
T ss_dssp ------CEEEEEC-------CCCEEEEE---EC----CEEEEEECTTSCEEEEEETT------SCEEEEECCTTCCCCEE
T ss_pred ------cEEEEEcccCcCccccceeEEE---EcCCCCcEEEEEECCCCCEEEEEeCC------CEEEEEeccCCCCCeEE
Confidence 3677776432 2222221 1111111122333 45666667654 2588888843 23443
Q ss_pred eecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeee
Q 010571 183 VEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 183 ~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
+..... ....-.++....++.+++.|+.+ ..+.++|..+..|..+.
T Consensus 146 ~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 146 ISVLQE--HSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDWECVA 191 (330)
T ss_dssp EEEECC--CSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEE
T ss_pred EEEecc--CCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCeeEEE
Confidence 322111 11111122333455577777765 35777887777676543
No 264
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=88.81 E-value=13 Score=33.59 Aligned_cols=226 Identities=14% Similarity=0.087 Sum_probs=103.2
Q ss_pred CceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEE
Q 010571 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 130 (507)
Q Consensus 53 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~ 130 (507)
+.|.++|+.+++....-.... ......++.+ +++.++.|+.+ ..+.++|..+++-.
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~----------------~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQ----------------PGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRL 102 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCS----------------TTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecC----------------CCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeE
Confidence 468999999987655433221 1112223333 56677777653 24888999888644
Q ss_pred EeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEe
Q 010571 131 VMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 131 ~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~G 210 (507)
.... ... ....+....+.+++.|+.+ ..+..++..+.........+. ...........++.+++.|
T Consensus 103 ~~~~---~h~--~~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~s~ 168 (318)
T 4ggc_A 103 RNMT---SHS--ARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGH---SQEVCGLRWAPDGRHLASG 168 (318)
T ss_dssp EEEE---CCS--SCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEE
T ss_pred EEec---Ccc--ceEEEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcCc---cCceEEEEEcCCCCEEEEE
Confidence 3321 111 1122333445555555543 235555555443332221111 1111222333444466666
Q ss_pred CCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCC
Q 010571 211 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 211 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~ 288 (507)
+.+ ..+.+||+.+..-..............-.+.+.. ++.++.+++.... ..+.++|.....-.......
T Consensus 169 ~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~i~lwd~~~~~~~~~~~~~ 240 (318)
T 4ggc_A 169 GND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVCSGACLSAVDAH 240 (318)
T ss_dssp ETT-----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT---CEEEEEETTTCCEEEEEECS
T ss_pred ecC-----cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC---CEEEEEecccccccccccce
Confidence 654 3577888876431110000000000011111221 3344433322221 24667777666544322211
Q ss_pred CCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 289 GRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 289 ~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
.........+....+++.+|.. ...+.++|+.+.
T Consensus 241 --------~~v~~~~~~~~~~~~~~~sg~~---d~~i~iwd~~~~ 274 (318)
T 4ggc_A 241 --------SQVCSILWSPHYKELISGHGFA---QNQLVIWKYPTM 274 (318)
T ss_dssp --------SCEEEEEEETTTTEEEEEECTT---TCCEEEEETTTC
T ss_pred --------eeeeeeeecccccceEEEEEcC---CCEEEEEECCCC
Confidence 1122333444555666665543 345788887543
No 265
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=88.71 E-value=0.96 Score=33.16 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=18.8
Q ss_pred HHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010571 433 LSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKS 479 (507)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~ 479 (507)
+...-.+++..+..+.++|..+..++ +.-|+|+..|+.+++
T Consensus 45 i~~Qi~Emq~Ir~tvyeLE~~h~kmK------q~YEeEI~rLr~eLe 85 (92)
T 3vp9_A 45 MNQQLAEMQQIRNTVYERELTHRKMK------DAYEEEIKHLKLGLE 85 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Confidence 44444444445555555554443222 234445555555444
No 266
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=88.60 E-value=8.8 Score=31.23 Aligned_cols=27 Identities=15% Similarity=0.303 Sum_probs=11.1
Q ss_pred HHHHHhhccchhhHHhHHHHHhhHhhh
Q 010571 417 EKIDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 417 ~~~~~~~~~~~~~~~e~~~~~~~~~~~ 443 (507)
..+..+..++.....++.....++..+
T Consensus 44 ~~~~~l~~~~~~~~~e~~~L~~~l~~E 70 (154)
T 2ocy_A 44 EDYNTLKRELSDRDDEVKRLREDIAKE 70 (154)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 333333333334444444444444433
No 267
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=88.53 E-value=3 Score=31.08 Aligned_cols=55 Identities=20% Similarity=0.235 Sum_probs=28.4
Q ss_pred hHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHH
Q 010571 432 ELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 432 e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~~~~ 486 (507)
+.....=+.+-++.+++++++.+.+++++.+... .+......++.++..+..++.
T Consensus 24 EKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 24 EKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555556666666666665555544433 333344555555555555554
No 268
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=88.25 E-value=2.5 Score=43.23 Aligned_cols=8 Identities=13% Similarity=0.410 Sum_probs=3.2
Q ss_pred HHHHHHHh
Q 010571 481 FEQEMERA 488 (507)
Q Consensus 481 ~~~~~~~~ 488 (507)
+.+|++++
T Consensus 572 ~~~ei~~l 579 (592)
T 1f5n_A 572 MKNEIQDL 579 (592)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444433
No 269
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=88.13 E-value=4.2 Score=28.98 Aligned_cols=16 Identities=19% Similarity=0.418 Sum_probs=6.7
Q ss_pred hhHHHHHHhhccchhh
Q 010571 414 RFREKIDEVNSTHSEL 429 (507)
Q Consensus 414 ~l~~~~~~~~~~~~~~ 429 (507)
.|+.+++++++++..+
T Consensus 24 lLqmEieELKekN~~L 39 (81)
T 2jee_A 24 LLQMEIEELKEKNNSL 39 (81)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344444444444443
No 270
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=87.86 E-value=2.8 Score=29.60 Aligned_cols=10 Identities=10% Similarity=0.302 Sum_probs=3.7
Q ss_pred HhHHHHHHHH
Q 010571 476 QQKSAFEQEM 485 (507)
Q Consensus 476 ~~~~~~~~~~ 485 (507)
.+++.+++++
T Consensus 59 ~e~~~l~~~~ 68 (81)
T 1wt6_A 59 AHVRQLQERM 68 (81)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 271
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=87.86 E-value=7.4 Score=35.72 Aligned_cols=165 Identities=8% Similarity=-0.008 Sum_probs=80.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEE----cccCC-
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLIL----GGHYK- 111 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~----GG~~~- 111 (507)
++.||+.... ...+.+||+. ++...+..... ..+..+....++.-++.||+. |-...
T Consensus 96 dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 96 QQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYA------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECEET------------TEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred CCCEEEEECC-----CCEEEEECCC-CCEEEEEeccC------------CCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 4567665321 2458889886 66655543211 001111122233336788885 43210
Q ss_pred ------CCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CC-EEEEEcCcCCCCCccCcEEEEEcCCCcEEEe
Q 010571 112 ------KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAV 183 (507)
Q Consensus 112 ------~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~ 183 (507)
.......++.||+.+++...+. ....+ ..++.. ++ .||+....... ...+.+++|++........
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p---~gl~~spdg~~lyv~~~~~~~-~~~~~i~~~~~~~~~l~~~ 230 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHP---NGLAFSPDEQTLYVSQTPEQG-HGSVEITAFAWRDGALHDR 230 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSE---EEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEE
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe---cCCCC---cceEEcCCCCEEEEEecCCcC-CCCCEEEEEEecCCCccCC
Confidence 0112457999999888877663 11111 122222 33 57776432110 0125799999876543222
Q ss_pred ecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 184 EVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 184 ~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
......+. -.-..++.-.++.||+..+ +.|++|++.......+
T Consensus 231 ~~~~~~~~-~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 231 RHFASVPD-GLPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp EEEECCSS-SCCCSEEECTTSCEEECCS-------SEEEEECTTSCEEEEE
T ss_pred eEEEECCC-CCCCeEEECCCCCEEEecC-------CcEEEECCCCCEEEEE
Confidence 21111111 1112345555666777542 3599999976655554
No 272
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=87.63 E-value=2.8 Score=30.65 Aligned_cols=27 Identities=11% Similarity=0.170 Sum_probs=10.7
Q ss_pred HHHHHHHHhhHHHHhhhhhhHHHHHHh
Q 010571 396 EDKRVLELSLTEVRTENSRFREKIDEV 422 (507)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~ 422 (507)
......+..+.....+..+|++.+...
T Consensus 9 ~~L~~aEeaL~~kq~~id~lke~~~q~ 35 (94)
T 3jsv_C 9 QQLQQAEEALVAKQELIDKLKEEAEQH 35 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 333333344433333444444444333
No 273
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=87.61 E-value=21 Score=34.36 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=58.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++.+++.|+.+ ..+.+||+.+..-...- ..+.......++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcCC
Confidence 46677777643 35889999887643332 11111122233333 45677777654 3599999988
Q ss_pred CcEEEeecCCCCCCCCCCceEEEE----cCcEEEEEeCCCCCcCCCcEEEEECCCCcEE
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALH----ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~----~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
.+....-. .+....-.+++.. .++.+++.|+.+ ..+.+||+.++.-.
T Consensus 246 ~~~~~~~~---~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 296 (437)
T 3gre_A 246 NVLIRSWS---FGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQ 296 (437)
T ss_dssp TEEEEEEB---CTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEE
T ss_pred ccEEEEEe---cCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEE
Confidence 66543321 0111101111111 245466666543 35889998876533
No 274
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.58 E-value=20 Score=34.21 Aligned_cols=173 Identities=15% Similarity=0.208 Sum_probs=92.0
Q ss_pred cCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCC------CcEEEeecCCCCCCCcccceEEEECCEEEEEc
Q 010571 85 LEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLET------NLCGVMETSGKVPVARGGHSVTLVGSRLIIFG 158 (507)
Q Consensus 85 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t------~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~G 158 (507)
+..|....-|+.|.+++.=|.+|=+..+..+ ..+-.+-+.. ..=+..-+ .......+..++-.+++.||+.-
T Consensus 278 ~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~P-Re~G~~yfs~~~~sp~~~vrr~i~-sey~~~AsEPCvkyYdgvLyLtT 355 (670)
T 3ju4_A 278 GLIPSVTEVHSFATIDNNGFAMGYHQGDVAP-REVGLFYFPDAFNSPSNYVRRQIP-SEYEPDASEPCIKYYDGVLYLIT 355 (670)
T ss_dssp CSCTTCSEEEEEEECSSSCEEEEEEECSSSS-CEEEEEEETTTTTCTTCCEEEECC-GGGCTTEEEEEEEEETTEEEEEE
T ss_pred ccccceeeeeeeeEecCCceEEEeccCCCCc-ceeeEEEecccccCCcceeeeech-hhhccccccchhhhhCCEEEEEe
Confidence 3445667789999999999999977666552 2333332221 11111110 11222233345556799999985
Q ss_pred CcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCC----------CCCcC---CCcEE--E
Q 010571 159 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGC----------SHSIF---FNDLH--V 223 (507)
Q Consensus 159 G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~----------~~~~~---~~~i~--~ 223 (507)
-.......-..+++-+.....|..+...... -......+.++ +.|||||-- .++.+ ..... +
T Consensus 356 Rgt~~~~~GS~L~rs~d~Gq~w~slrfp~nv--HhtnlPFakvg-D~l~mFgsERA~nEWE~G~pD~RY~a~yPRtF~~r 432 (670)
T 3ju4_A 356 RGTRGDRLGSSLHRSRDIGQTWESLRFPHNV--HHTTLPFAKVG-DDLIMFGSERAENEWEAGAPDDRYKASYPRTFYAR 432 (670)
T ss_dssp EESCTTSCCCEEEEESSTTSSCEEEECTTCC--CSSCCCEEEET-TEEEEEEECSSTTCSSTTCCCCCSSCBCCEEEEEE
T ss_pred cCcCCCCCcceeeeecccCCchhheeccccc--cccCCCcceeC-CEEEEEeccccccccccCCCcccccccCCceEEEE
Confidence 4433333455788888888899999742111 11112234554 459999853 12211 11222 2
Q ss_pred EEC-----CCCcEEeeee---cCCCCCCCcceEEEEE-CCEE-EEEecc
Q 010571 224 LDL-----QTNEWSQPEI---KGDLVTGRAGHAGITI-DENW-YIVGGG 262 (507)
Q Consensus 224 ~d~-----~~~~W~~~~~---~~~~p~~r~~~~~~~~-~~~l-~v~GG~ 262 (507)
.++ ..-.|..+.. .|.....-++..++++ ++-| |||||.
T Consensus 433 ~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgE 481 (670)
T 3ju4_A 433 LNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGE 481 (670)
T ss_dssp EETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEB
T ss_pred eecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCc
Confidence 232 2234555432 2445555566666666 4555 477774
No 275
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=87.53 E-value=6.9 Score=29.88 Aligned_cols=20 Identities=20% Similarity=0.124 Sum_probs=8.4
Q ss_pred hhhhHHHHHHHHHHHHHhHH
Q 010571 446 RCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 446 ~~~~~e~~~~e~~~~~~~~~ 465 (507)
+++.+..+++.-++.|+.++
T Consensus 46 qV~~L~~~~q~sE~~L~~Lq 65 (112)
T 1x79_B 46 QISALVLRAQASEILLEELQ 65 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443
No 276
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=87.52 E-value=3 Score=40.75 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHH----HHhHHHHHHHHHHHHHhHHHHHHHHH
Q 010571 449 KLEAQIAELQKM----LESSQTIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 449 ~~e~~~~e~~~~----~~~~~~~e~e~~~~~~~~~~~~~~~~ 486 (507)
+|+..++.|+++ ++.++.|++-++.++.++++||-.+.
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDId 155 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDID 155 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555544444 45555777777777777777777653
No 277
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=87.42 E-value=1.8 Score=30.58 Aligned_cols=39 Identities=10% Similarity=0.249 Sum_probs=20.2
Q ss_pred hhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhh
Q 010571 410 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF 448 (507)
Q Consensus 410 ~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 448 (507)
++...|+-.+.+++.+..+.++.|...+.++..+++.+.
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe 64 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVA 64 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 355555555666555555555555555544444444333
No 278
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=87.08 E-value=2.8 Score=33.39 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHhHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~ 484 (507)
.++.++.+++.+.+...++
T Consensus 86 ~lE~eL~~~r~e~~~ql~E 104 (129)
T 3tnu_B 86 ELEEALQKAKQDMARLLRE 104 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHH
Confidence 4555555555554444333
No 279
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=86.90 E-value=14 Score=36.50 Aligned_cols=188 Identities=14% Similarity=0.081 Sum_probs=90.3
Q ss_pred CCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeE------------eee
Q 010571 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSN------------LRL 70 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~------------~~~ 70 (507)
+-.|.||...+....-.-.| .+.. -++....+.+|+|-| +..+.||+.+.+-.. ++.
T Consensus 167 ~~yw~yd~~~~~~~~~~w~g---i~~i-DAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~gyPk~is~~w~~c~~ 235 (460)
T 1qhu_A 167 NRKWFWDLTTGTKKERSWPA---VGNC-TSALRWLGRYYCFQG-------NQFLRFNPVSGEVPPGYPLDVRDYFLSCPG 235 (460)
T ss_dssp TEEEEEETTTTEEEEECCTT---SCCC-SEEEEETTEEEEEET-------TEEEEECTTTCCCCTTCCEEHHHHTSCCTT
T ss_pred ccEEEEecccceeecccCCC---CCcc-chheeeCCceEEEEC-------CEEEEEcCccCcccCCCCcchhhcccCCCC
Confidence 34588998776544322111 2233 344445789999988 567888886653221 110
Q ss_pred ccccccC--ccccCCccCCCC-CccceeeEE-ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecC---CCCCCCcc
Q 010571 71 ETELDAD--KTEDSGLLEVLP-PMSDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVARG 143 (507)
Q Consensus 71 ~~~~~~~--~~~~~~~~~~p~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~---g~~p~~r~ 143 (507)
.+..+.. .+.+-....... ....-+++. .++++|+|-|. ..|.||.....+...... ..+|..
T Consensus 236 ~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~--------~yWR~~~~~~~~~p~~Is~~WpglP~~-- 305 (460)
T 1qhu_A 236 RGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPST-- 305 (460)
T ss_dssp CCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT--------EEEECTTGGGCCCCEEGGGTCTTSCSS--
T ss_pred CCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC--------EEEEEecCCCCcCccchhhhccCCCCC--
Confidence 0000000 000000000011 111223333 46899999773 266666544332221111 123332
Q ss_pred cceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEe-------e-cCCCCCCC--CCCceEEEE--cCcEEEEEeC
Q 010571 144 GHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAV-------E-VTQTPPAP--RYDHSAALH--ANRYLIVFGG 211 (507)
Q Consensus 144 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~-------~-~~g~~p~~--r~~~~~~~~--~~~~l~i~GG 211 (507)
--++...++.+|+|=|. .+++|+..++ .+.. . ..| +|.. ...--++.. .++++|+|-|
T Consensus 306 IDAAf~~~~~~yfFkG~--------~yw~f~~~~g-~~~~~GyPK~I~~~lG-lp~~~~~~~IDAA~~~~~~~ktyfFkG 375 (460)
T 1qhu_A 306 VDAAFSWEDKLYLIQDT--------KVYVFLTKGG-YTLVNGYPKRLEKELG-SPPVISLEAVDAAFVCPGSSRLHIMAG 375 (460)
T ss_dssp CSEEEEETTEEEEEETT--------EEEEEECSBS-CEECTTCCEEHHHHHC-CCSSCCCSCCCEEECCTTCCEEEEEET
T ss_pred CcEEEEECCeEEEEeCC--------EEEEEeCCCC-ceecCCCCeEHHHhcc-CCCccccCcccEEEEeCCCCEEEEEEC
Confidence 23344457899998653 4777875431 1111 1 012 2322 112223332 5678999988
Q ss_pred CCCCcCCCcEEEEECCC
Q 010571 212 CSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 212 ~~~~~~~~~i~~~d~~~ 228 (507)
+..|+||...
T Consensus 376 -------~~ywryd~~~ 385 (460)
T 1qhu_A 376 -------RRLWWLDLKS 385 (460)
T ss_dssp -------TEEEEEEGGG
T ss_pred -------CEEEEEECCC
Confidence 6799999864
No 280
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=86.78 E-value=3.7 Score=39.82 Aligned_cols=47 Identities=11% Similarity=0.074 Sum_probs=27.1
Q ss_pred chhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhH
Q 010571 387 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKEL 433 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~ 433 (507)
|.+++...+....+++..+.+....+....+.+..++......++..
T Consensus 86 L~kye~~V~~dl~~Le~~l~~isn~Ts~a~~~v~~ik~s~~~~q~~~ 132 (461)
T 3ghg_B 86 LLQQERPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQV 132 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHhcccchhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccccCCC
Confidence 44555566666666666666655555555555666555554444433
No 281
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=86.73 E-value=2.2 Score=31.21 Aligned_cols=15 Identities=7% Similarity=0.311 Sum_probs=6.2
Q ss_pred hhHHHHHHhhccchh
Q 010571 414 RFREKIDEVNSTHSE 428 (507)
Q Consensus 414 ~l~~~~~~~~~~~~~ 428 (507)
.|...++..++-+..
T Consensus 6 ~L~~~L~~aEeaL~~ 20 (94)
T 3jsv_C 6 DLRQQLQQAEEALVA 20 (94)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444333
No 282
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=86.29 E-value=7.5 Score=38.07 Aligned_cols=57 Identities=11% Similarity=0.081 Sum_probs=28.1
Q ss_pred chhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhh
Q 010571 387 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 443 (507)
+...++.|+....++...-...++-...|+..+...+.++.+.+..+++...++++.
T Consensus 98 V~~~LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~ 154 (464)
T 1m1j_B 98 VKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELH 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Confidence 445566666666666554444444444444444444444444443344444444333
No 283
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=86.28 E-value=2.4 Score=33.83 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHhHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~ 484 (507)
.++.++.+++.+.+...++
T Consensus 88 ~lE~eL~~~r~em~~ql~E 106 (131)
T 3tnu_A 88 SVEEQLAQLRCEMEQQNQE 106 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4555555555555444443
No 284
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=86.16 E-value=26 Score=34.11 Aligned_cols=121 Identities=17% Similarity=0.110 Sum_probs=60.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEcccCC---C
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYK---K 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~---~ 112 (507)
+..+|+.-....... +.+.++|+.+++-...-..+ ..-+.+..- +..+|+.--... .
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG------------------~~Pgia~SpDgk~lyVan~~~~~~~~ 144 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGG------------------FLPHPVAAEDGSFFAQASTVFERIAR 144 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEEC------------------SSCEEEECTTSSCEEEEEEEEEETTE
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECC------------------CCCceEECCCCCEEEEEecccccccc
Confidence 456777654221111 68999999988654333222 111222222 456777631100 0
Q ss_pred CCCcceEEEEECCCCcEEE-eecCCCCC--CCcccceEEE--ECCEEEEEcCcCCCCCccCcEEEEEcCCCcEE
Q 010571 113 SSDSMIVRFIDLETNLCGV-METSGKVP--VARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD 181 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~-~~~~g~~p--~~r~~~~~~~--~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~ 181 (507)
....+.+.+||+.+++-.. +...+... ....-+.+++ -+.++|+..-. ..+.+.++|+.+++-.
T Consensus 145 G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 145 GKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----SSCEEEEEETTTTEEE
T ss_pred CCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-----CCCeEEEEECCCCeEE
Confidence 0114569999999986543 22110000 0011122222 24478876321 1457999999887643
No 285
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=86.10 E-value=2.9 Score=29.73 Aligned_cols=27 Identities=19% Similarity=0.484 Sum_probs=11.6
Q ss_pred hhHHHHHHhhccchhhHHhHHHHHhhH
Q 010571 414 RFREKIDEVNSTHSELSKELSSVQGQL 440 (507)
Q Consensus 414 ~l~~~~~~~~~~~~~~~~e~~~~~~~~ 440 (507)
.+.+++++.+..+.++++.++..+.++
T Consensus 10 ~~~~klq~~E~rN~~Le~~v~~le~~L 36 (79)
T 3cvf_A 10 ETQQKVQDLETRNAELEHQLRAMERSL 36 (79)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 334444444444444444444333333
No 286
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=86.05 E-value=20 Score=32.61 Aligned_cols=195 Identities=10% Similarity=0.066 Sum_probs=89.6
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCC--CcEEEeecCCCCCCCcccceEEEE----CCEEEEEcCcCCCCCccCcEEEE
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLET--NLCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFL 173 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t--~~W~~~~~~g~~p~~r~~~~~~~~----~~~l~~~GG~~~~~~~~~~~~~~ 173 (507)
++.+++.|+.+ ..+.+||..+ ..+..... +......-.++.+ ++.+++.|+.+ ..+.+|
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~d~~~l~s~~~d------g~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSD------QHIKVFKLDKDTSNWELSDS---WRAHDSSIVAIDWASPEYGRIIASASYD------KTVKLW 86 (351)
T ss_dssp SSSEEEEEETT------SEEEEEEECSSSCCEEEEEE---EECCSSCEEEEEECCGGGCSEEEEEETT------SCEEEE
T ss_pred CCCEEEEeeCC------CeEEEEECCCCCCcceecce---eccCCCcEEEEEEcCCCCCCEEEEEcCC------CeEEEE
Confidence 45566666643 2366676664 34444331 1111122223333 25677777754 258888
Q ss_pred EcCCC-------cEEEeecCCCCCCCCCCceEEEEcC--cEEEEEeCCCCCcCCCcEEEEECCCCc----EEeeee---c
Q 010571 174 DLETM-------TWDAVEVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTNE----WSQPEI---K 237 (507)
Q Consensus 174 d~~t~-------~W~~~~~~g~~p~~r~~~~~~~~~~--~~l~i~GG~~~~~~~~~i~~~d~~~~~----W~~~~~---~ 237 (507)
|+.+. .|..+..... ....-.+++...+ +.+++.|+.+ ..+.+||+.+.. |..... .
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred ecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChHHhcccccccccccc
Confidence 88664 3343332111 1111223333333 4466777654 458888876643 322110 0
Q ss_pred CCCCCC-CcceEEEEE-----CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCce--
Q 010571 238 GDLVTG-RAGHAGITI-----DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEH-- 309 (507)
Q Consensus 238 ~~~p~~-r~~~~~~~~-----~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~-- 309 (507)
...+.. .....++.+ ++.++++|+.++ .+..++........+..+... ......+.+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h------~~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-----AIIYQRGKDGKLHVAAKLPGH------KSLIRSISWAPSIGR 228 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-----EEEEEECTTSCEEEEEECCCC------CSCEEEEEECCCSSC
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCC-----cEEEEccCCCceeeeeecCCC------CcceeEEEECCCCCC
Confidence 111111 111122222 256777776442 234455555555444333221 1223333444443
Q ss_pred --EEEEEcccCCCcCCeEEEEECC
Q 010571 310 --HLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 310 --~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
.+++.|+.++ .+..+|+.
T Consensus 229 ~~~~l~s~~~dg----~i~iwd~~ 248 (351)
T 3f3f_A 229 WYQLIATGCKDG----RIRIFKIT 248 (351)
T ss_dssp SSEEEEEEETTS----CEEEEEEE
T ss_pred cceEEEEEcCCC----eEEEEeCC
Confidence 5777777653 45666654
No 287
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=86.00 E-value=8.4 Score=31.05 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=15.4
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhh
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAER 444 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 444 (507)
+...++.++..++.++.+..+.++.+++++..++
T Consensus 76 El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLq 109 (152)
T 3a7p_A 76 ELKSKEQEIRRLKEVIALKNKNTERLNAALISGT 109 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444444433
No 288
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=85.90 E-value=8.8 Score=28.39 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=28.8
Q ss_pred hHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhh
Q 010571 390 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF 448 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 448 (507)
..+.++.+...++..+.....+..+|+..+..-...-.+.++++..+..+++.+-..++
T Consensus 6 ~~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLF 64 (97)
T 2eqb_B 6 NYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLF 64 (97)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555554444444455555555554444444444444445445544444333
No 289
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=85.90 E-value=1.8 Score=32.33 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=19.8
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHHhhHhh
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVA 442 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~ 442 (507)
+...++++|+.++.+...+++++...+.+++.
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666777666666666666555555543
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=85.55 E-value=23 Score=32.89 Aligned_cols=259 Identities=10% Similarity=0.078 Sum_probs=125.5
Q ss_pred CCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCC
Q 010571 11 PYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLP 89 (507)
Q Consensus 11 ~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~ 89 (507)
....|+.+.. |....-.++... .+.+|++|- . ..++.-.-.-.+|+.+..... .+
T Consensus 23 ~g~~W~~~~~----~~~~~~~~v~~~~~~~~~~~G~-~-----g~i~~s~DgG~tW~~~~~~~~--------------~~ 78 (327)
T 2xbg_A 23 DYNPWEAIQL----PTTATILDMSFIDRHHGWLVGV-N-----ATLMETRDGGQTWEPRTLVLD--------------HS 78 (327)
T ss_dssp SSCCEEEEEC----SCSSCEEEEEESSSSCEEEEET-T-----TEEEEESSTTSSCEECCCCCS--------------CC
T ss_pred CCCCceEeec----CCCCcEEEEEECCCCcEEEEcC-C-----CeEEEeCCCCCCCeECCCCCC--------------CC
Confidence 3578988863 322222333333 566787653 1 124333222358988753210 11
Q ss_pred CccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEE-ECCEEEEEcCcCCCCCccC
Q 010571 90 PMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLN 168 (507)
Q Consensus 90 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~l~~~GG~~~~~~~~~ 168 (507)
.....+++..++.+|+.|.. ..++.-+-.-.+|+.+......|.. .+.++. -++.+|+.|.. .
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~-------g 142 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLPGS--PRLIKALGNGSAEMITNV-------G 142 (327)
T ss_dssp CCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCSSC--EEEEEEEETTEEEEEETT-------C
T ss_pred CccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCCCC--eEEEEEECCCCEEEEeCC-------c
Confidence 22334445557788887531 1244433235689998632112221 233333 35688877642 1
Q ss_pred cEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECC-CCcEEeeeecCCCCCCCcce
Q 010571 169 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 169 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~ 247 (507)
.+++-+-.-.+|+.+.. +.+...+.++...++.++++|-. ..+++-+-. ..+|+.+.. +.+...+
T Consensus 143 ~v~~S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~~~~----~~~~~~~ 208 (327)
T 2xbg_A 143 AIYRTKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEPHNR----TTSRRLH 208 (327)
T ss_dssp CEEEESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEEEEC----CSSSCEE
T ss_pred cEEEEcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeECCC----CCCCccc
Confidence 24443323568999863 22233345555556656666532 234444322 568998742 2333444
Q ss_pred EEEEE-CCEEEEEeccCCCCCcceEEEEEcC-cCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeE
Q 010571 248 AGITI-DENWYIVGGGDNNNGCQETIVLNMT-KLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEV 325 (507)
Q Consensus 248 ~~~~~-~~~l~v~GG~~~~~~~~d~~~~d~~-~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v 325 (507)
.++.. ++.+|+++. .+ .+++.+.. ..+|+.+...+ .+. +.....+...+...++++|+.. .+
T Consensus 209 ~~~~~~~g~~~~~~~-~G-----~~~~s~~D~G~tW~~~~~~~----~~~-~~~~~~v~~~~~~~~~~~g~~g-----~i 272 (327)
T 2xbg_A 209 NMGFTPDGRLWMIVN-GG-----KIAFSDPDNSENWGELLSPL----RRN-SVGFLDLAYRTPNEVWLAGGAG-----AL 272 (327)
T ss_dssp EEEECTTSCEEEEET-TT-----EEEEEETTEEEEECCCBCTT----SSC-CSCEEEEEESSSSCEEEEESTT-----CE
T ss_pred eeEECCCCCEEEEeC-Cc-----eEEEecCCCCCeeEeccCCc----ccC-CcceEEEEecCCCEEEEEeCCC-----eE
Confidence 44433 467777653 11 24444333 56898764321 111 1122233333345677777622 24
Q ss_pred EEEECCCCCCCCCc
Q 010571 326 FVMRLKPRDIPRPK 339 (507)
Q Consensus 326 ~~~~~~~~~w~~~~ 339 (507)
+.-.-.-..|....
T Consensus 273 ~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 273 LCSQDGGQTWQQDV 286 (327)
T ss_dssp EEESSTTSSCEECG
T ss_pred EEeCCCCcccEEcC
Confidence 33222345776543
No 291
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=85.47 E-value=3.4 Score=29.25 Aligned_cols=10 Identities=10% Similarity=0.777 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q 010571 467 IENEVQILRQ 476 (507)
Q Consensus 467 ~e~e~~~~~~ 476 (507)
+++.++.+++
T Consensus 58 l~~ni~~lk~ 67 (78)
T 3iv1_A 58 VDKNIELLKK 67 (78)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333433333
No 292
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=85.42 E-value=25 Score=33.22 Aligned_cols=112 Identities=12% Similarity=0.010 Sum_probs=56.5
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCC--CCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEc
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVP--VARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p--~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~ 175 (507)
++..++.|+.+. .+.+||+.++.-.......... .......++.+ ++.+++.|+.+ ..+.++|+
T Consensus 260 ~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d------g~i~vwd~ 327 (380)
T 3iz6_a 260 DGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN------GDCYVWDT 327 (380)
T ss_dssp TSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT------SCEEEEET
T ss_pred CCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC------CCEEEEEC
Confidence 566777776532 3889999887644432110100 01111122333 45666666643 35999998
Q ss_pred CCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCC
Q 010571 176 ETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 176 ~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~ 228 (507)
.+..-......-.......-.+++...++.+++.||.++ .+.++++..
T Consensus 328 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 328 LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 876654322100001111122334445666777887653 466666553
No 293
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=85.40 E-value=4.2 Score=41.56 Aligned_cols=15 Identities=13% Similarity=0.417 Sum_probs=7.4
Q ss_pred HHHHHHHhHHHHHHH
Q 010571 470 EVQILRQQKSAFEQE 484 (507)
Q Consensus 470 e~~~~~~~~~~~~~~ 484 (507)
+...+++|++.|.++
T Consensus 568 ~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 568 ESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 344555555555444
No 294
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=85.35 E-value=38 Score=35.20 Aligned_cols=125 Identities=13% Similarity=0.037 Sum_probs=68.7
Q ss_pred eeeEEECCEEEEEcccCCCCCCcceEEEEECCCCc--EEEeecCCCC--CC---CcccceEEEECCEEEEEcCcCCCCCc
Q 010571 94 HCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKV--PV---ARGGHSVTLVGSRLIIFGGEDRSRKL 166 (507)
Q Consensus 94 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~g~~--p~---~r~~~~~~~~~~~l~~~GG~~~~~~~ 166 (507)
.+-++.++.||+... ...++.+|..|++ |+.-...... +. .....+.++.++.||+...
T Consensus 60 ~~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------- 125 (668)
T ss_dssp CCCEEETTEEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------
T ss_pred cCCEEECCEEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------
Confidence 344567999999865 3358999988774 8764311000 00 0011234556788877532
Q ss_pred cCcEEEEEcCCCc--EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc--EEee
Q 010571 167 LNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQP 234 (507)
Q Consensus 167 ~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~--W~~~ 234 (507)
...++.||..|++ |+..... .........+.++. ++.+|+..+.........++.||+.++. |+.-
T Consensus 126 dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 126 DGRLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TSEEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEeeeeccCC-CCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 2469999998875 8765421 11111111222333 6656553322221233579999998875 8763
No 295
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=85.22 E-value=18 Score=31.32 Aligned_cols=155 Identities=13% Similarity=0.090 Sum_probs=78.1
Q ss_pred EEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccC
Q 010571 33 AAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHY 110 (507)
Q Consensus 33 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 110 (507)
++...+.+|+|=| ..+|+++.....+......... .. .+..... +... ++++|+|-|.
T Consensus 29 i~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~w----------p~-Lp~~iDA-a~~~~~~~~iyfFkG~- 88 (207)
T 1pex_A 29 ITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFW----------PE-LPNRIDA-AYEHPSHDLIFIFRGR- 88 (207)
T ss_dssp EEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHC----------TT-SCSSCCE-EEEETTTTEEEEEETT-
T ss_pred EEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhc----------cC-CCCCccE-EEEeccCCcEEEEccC-
Confidence 4456899999977 4477776654333221111100 11 1122222 2223 5899999773
Q ss_pred CCCCCcceEEEEECCCCc---EEEeecCCCCCCCcccc-eEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEee
Q 010571 111 KKSSDSMIVRFIDLETNL---CGVMETSGKVPVARGGH-SVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 184 (507)
Q Consensus 111 ~~~~~~~~~~~~d~~t~~---W~~~~~~g~~p~~r~~~-~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~ 184 (507)
.+|+|+-.+-. =+.+...| +|.....- ++... ++++|+|-|. ..+.||..+.+-..-.
T Consensus 89 -------~~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG~--------~ywr~d~~~~~~d~gy 152 (207)
T 1pex_A 89 -------KFWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSGN--------QVWRYDDTNHIMDKDY 152 (207)
T ss_dssp -------EEEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEETT--------EEEEEETTTTEECSSC
T ss_pred -------EEEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeCC--------EEEEEeCcCccccCCC
Confidence 37777643211 11222111 33211122 22222 3699999763 5889988654321000
Q ss_pred cC------CCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 185 VT------QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 185 ~~------g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
+. ..+| ... .++. ..++.+|+|-| +..|+||..+..-..
T Consensus 153 Pr~i~~~~~Gip-~~i-DaAf-~~~g~~YfFkg-------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 153 PRLIEEDFPGIG-DKV-DAVY-EKNGYIYFFNG-------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp CCBHHHHSTTSC-SCC-SEEE-EETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CccHHHcCCCCC-CCc-cEEE-EcCCcEEEEEC-------CEEEEEeCCccEEec
Confidence 00 0122 222 2333 34778999988 678999987766543
No 296
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.12 E-value=26 Score=33.05 Aligned_cols=181 Identities=11% Similarity=0.021 Sum_probs=89.2
Q ss_pred CceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEe
Q 010571 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 132 (507)
Q Consensus 53 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~ 132 (507)
..+.++|+.++.-....... ......+..-++++++.|+. +.+.+++..++.....
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~-----------------~~V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETR-----------------GEVKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp CEEEEEETTTTEEEEEEECS-----------------SCCCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEE
T ss_pred CEEEEeECCCCcEEEEeCCC-----------------CceEEEEEccCCceEEeccc-------eeEEEEEeccCcceee
Confidence 45889999987754433211 11111111225666666642 2367788887765543
Q ss_pred ecCCCCCCCcccceEE--EECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEe
Q 010571 133 ETSGKVPVARGGHSVT--LVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 133 ~~~g~~p~~r~~~~~~--~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~G 210 (507)
.. ..........+ .-++..++.++.+... ...+..+|+...................-.+++...++.+++.|
T Consensus 213 ~~---~~~~~~~v~~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 213 KT---DFDKNWSLSKINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp EC---CCCTTEEEEEEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred ee---cCCCCCCEEEEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 31 11111111222 2367777777665432 22356667666555433211000111111233444667788888
Q ss_pred CCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEc
Q 010571 211 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNM 276 (507)
Q Consensus 211 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~ 276 (507)
+.+ ..|.+||+.+..-..-- .......-.++.+ ++++++-|+.++ .+-++|+
T Consensus 288 s~D-----~~V~iwd~~~~~~~~~~----~~gH~~~V~~v~fSpdg~~laS~S~D~-----tvrvw~i 341 (365)
T 4h5i_A 288 SND-----NSIALVKLKDLSMSKIF----KQAHSFAITEVTISPDSTYVASVSAAN-----TIHIIKL 341 (365)
T ss_dssp ETT-----SCEEEEETTTTEEEEEE----TTSSSSCEEEEEECTTSCEEEEEETTS-----EEEEEEC
T ss_pred cCC-----CEEEEEECCCCcEEEEe----cCcccCCEEEEEECCCCCEEEEEeCCC-----eEEEEEc
Confidence 765 45889998876543210 1111111233444 567777776543 3556665
No 297
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=84.47 E-value=15 Score=29.86 Aligned_cols=10 Identities=0% Similarity=0.072 Sum_probs=3.8
Q ss_pred HHHHHhhHhh
Q 010571 433 LSSVQGQLVA 442 (507)
Q Consensus 433 ~~~~~~~~~~ 442 (507)
+..+..+++.
T Consensus 81 ~~~ie~ElEe 90 (154)
T 2ocy_A 81 ADKLNKEVED 90 (154)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 298
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=84.40 E-value=0.34 Score=49.54 Aligned_cols=9 Identities=0% Similarity=-0.064 Sum_probs=4.0
Q ss_pred ceEEEEEcc
Q 010571 308 EHHLVAFGG 316 (507)
Q Consensus 308 ~~~l~v~GG 316 (507)
+.+.|.+++
T Consensus 253 k~F~I~~~~ 261 (575)
T 2i1j_A 253 RKFIIKPID 261 (575)
T ss_dssp TEEEEEESC
T ss_pred CeEEEEEcc
Confidence 334444453
No 299
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=84.12 E-value=10 Score=27.59 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHhHH
Q 010571 466 TIENEVQILRQQKS 479 (507)
Q Consensus 466 ~~e~e~~~~~~~~~ 479 (507)
+|+-|+..+.++++
T Consensus 71 elqgEI~~Lnq~Lq 84 (99)
T 3ni0_A 71 ELENEVTKLNQELE 84 (99)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444333
No 300
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=83.97 E-value=9.9 Score=28.94 Aligned_cols=7 Identities=29% Similarity=0.425 Sum_probs=2.5
Q ss_pred hHHhHHH
Q 010571 429 LSKELSS 435 (507)
Q Consensus 429 ~~~e~~~ 435 (507)
++.++++
T Consensus 34 L~~~~~~ 40 (107)
T 2no2_A 34 LEDSLER 40 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 301
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=83.96 E-value=2.4 Score=24.47 Aligned_cols=28 Identities=11% Similarity=0.281 Sum_probs=16.0
Q ss_pred HHhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010571 461 LESSQTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 461 ~~~~~~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
|++.++|.+++++.+.++.++.++-+++
T Consensus 6 L~ENekLhk~ie~KdeeIa~Lk~eN~eL 33 (37)
T 1t6f_A 6 LKENEKLHKEIEQKDNEIARLKKENKEL 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4445556666666666666665555444
No 302
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=83.84 E-value=7 Score=27.21 Aligned_cols=24 Identities=29% Similarity=0.471 Sum_probs=10.3
Q ss_pred HHHHHhhccchhhHHhHHHHHhhH
Q 010571 417 EKIDEVNSTHSELSKELSSVQGQL 440 (507)
Q Consensus 417 ~~~~~~~~~~~~~~~e~~~~~~~~ 440 (507)
+++++.+..+.++++.++..+.++
T Consensus 7 ~kLq~~E~~N~~Le~~v~~le~~L 30 (72)
T 3cve_A 7 MKLQEVEIRNKDLEGQLSEMEQRL 30 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 344444444444444444333333
No 303
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=83.48 E-value=6.1 Score=31.27 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=18.5
Q ss_pred hhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhH
Q 010571 413 SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKL 450 (507)
Q Consensus 413 ~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 450 (507)
+.++.++..+...+..+..++.....++..++.+..+.
T Consensus 28 e~l~~~l~~l~~~l~~~~~e~~~L~~~l~eE~~~R~~a 65 (135)
T 2e7s_A 28 NQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKA 65 (135)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHTHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455544445555555555555555554433333
No 304
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=83.47 E-value=27 Score=33.73 Aligned_cols=152 Identities=11% Similarity=0.061 Sum_probs=70.0
Q ss_pred CEEEEEcCcCCCCCccCcEEEEEcCCC--------cEEEeecCCCCCCCCCCceEEEEcCcE-EEEEeCCCCCcCCCcEE
Q 010571 152 SRLIIFGGEDRSRKLLNDVHFLDLETM--------TWDAVEVTQTPPAPRYDHSAALHANRY-LIVFGGCSHSIFFNDLH 222 (507)
Q Consensus 152 ~~l~~~GG~~~~~~~~~~~~~~d~~t~--------~W~~~~~~g~~p~~r~~~~~~~~~~~~-l~i~GG~~~~~~~~~i~ 222 (507)
+.+++.|+.+ ..|.+||+.+. ....+... ........++....++. +++.|+.+ ..+.
T Consensus 141 ~~~lat~~~d------g~V~vwd~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~ 207 (430)
T 2xyi_A 141 ACVIATKTPS------SDVLVFDYTKHPSKPEPSGECQPDLRL--RGHQKEGYGLSWNPNLNGYLLSASDD-----HTIC 207 (430)
T ss_dssp EEEEEEECSS------SCEEEEEGGGSCSSCCTTCCCCCSEEE--ECCSSCCCCEEECTTSTTEEEEECTT-----SCEE
T ss_pred CcEEEEECCC------CcEEEEECCCcccccCccccCCCcEEe--cCCCCCeEEEEeCCCCCCeEEEEeCC-----CeEE
Confidence 3566666643 35888888651 11111100 01111223344444443 67777654 4588
Q ss_pred EEECCCCc---EEeeeecCCCCCCCcceEEEEE---CCEEEEEeccCCCCCcceEEEEEcCcCe-eEEeccCCCCCCCCC
Q 010571 223 VLDLQTNE---WSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLA-WSILTSVKGRNPLAS 295 (507)
Q Consensus 223 ~~d~~~~~---W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~d~~~~d~~~~~-W~~~~~~~~~~p~~~ 295 (507)
+||+.+.. +.... .............+.+ ++.+++.|+.++ .+.+||+.+.. ...+..+. .
T Consensus 208 vwd~~~~~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~i~i~d~~~~~~~~~~~~~~------~ 275 (430)
T 2xyi_A 208 LWDINATPKEHRVIDA-KNIFTGHTAVVEDVAWHLLHESLFGSVADDQ-----KLMIWDTRNNNTSKPSHTVD------A 275 (430)
T ss_dssp EEETTSCCBGGGEEEC-SEEECCCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCSCSSSCSEEEE------C
T ss_pred EEeCCCCCCCCceecc-ceeecCCCCCEeeeEEeCCCCCEEEEEeCCC-----eEEEEECCCCCCCcceeEee------c
Confidence 89987621 21100 0001111111122333 456777776443 47889987652 11111110 0
Q ss_pred CCCceEEEEE-cCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 296 EGLSVCSAII-EGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 296 ~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
+......+.+ +.+..+++.|+.+ ..+.+||+..
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~d----g~v~vwd~~~ 309 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSAD----KTVALWDLRN 309 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETT----SEEEEEETTC
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCC----CeEEEEeCCC
Confidence 1112223333 3344577778765 4577888754
No 305
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=83.37 E-value=5.4 Score=27.58 Aligned_cols=27 Identities=22% Similarity=0.361 Sum_probs=12.9
Q ss_pred HHHHhhccchhhHHhHHHHHhhHhhhh
Q 010571 418 KIDEVNSTHSELSKELSSVQGQLVAER 444 (507)
Q Consensus 418 ~~~~~~~~~~~~~~e~~~~~~~~~~~~ 444 (507)
.++.+..+.+++.+.+...+++++..+
T Consensus 5 ~v~~l~~E~eel~~klk~~~ee~~~~~ 31 (71)
T 1uix_A 5 DVANLANEKEELNNKLKEAQEQLSRLK 31 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555444555444444443
No 306
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=83.33 E-value=4.3 Score=42.58 Aligned_cols=63 Identities=8% Similarity=0.083 Sum_probs=31.0
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCccccceEEEE-CCEEEEEcCCCCC----ccCCceEEEECCCCce
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNG----RFLSDVQVFDLRSLAW 65 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~----~~~~~~~~~d~~t~~W 65 (507)
|...|.+|+.++.-..+....... ...-.+.+.. ++..++++....+ .....++++|+.++..
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMK-SVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHH-TTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCcEEEEEcccccc-ccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 345778888877766554210000 0001222222 4444444432111 1124689999998875
No 307
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=83.25 E-value=5.4 Score=38.48 Aligned_cols=15 Identities=7% Similarity=-0.239 Sum_probs=6.7
Q ss_pred hhHHhhHHHHHHHHH
Q 010571 389 TDIDAIKEDKRVLEL 403 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~ 403 (507)
+++..++...+.++.
T Consensus 31 k~e~~V~~~l~~LE~ 45 (409)
T 1m1j_C 31 KYRLTTDGELLEIEG 45 (409)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHhcchhHHHHHHH
Confidence 344444444444444
No 308
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=83.06 E-value=13 Score=28.16 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHh
Q 010571 464 SQTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 464 ~~~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
.++|+-|+..|.++++..+.+++++
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erl 97 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERL 97 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555554443
No 309
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=82.72 E-value=9.9 Score=26.44 Aligned_cols=22 Identities=14% Similarity=0.129 Sum_probs=9.1
Q ss_pred HHHHHhhHhhhhhhhhhHHHHH
Q 010571 433 LSSVQGQLVAERSRCFKLEAQI 454 (507)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~e~~~ 454 (507)
+++.+..++.+++++..+++.+
T Consensus 9 Lq~~E~~N~~Le~~v~~le~~L 30 (72)
T 3cve_A 9 LQEVEIRNKDLEGQLSEMEQRL 30 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHH
Confidence 3344444444444444444333
No 310
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=82.71 E-value=5.1 Score=29.61 Aligned_cols=42 Identities=29% Similarity=0.454 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010571 447 CFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 447 ~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
..+++.++.++++++..++.++++...++.+-.-++.+++..
T Consensus 49 ~~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~F 90 (96)
T 1t3j_A 49 QKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENF 90 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 345666777777777778877777777777777777777654
No 311
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=82.65 E-value=35 Score=32.71 Aligned_cols=70 Identities=9% Similarity=0.070 Sum_probs=39.7
Q ss_pred CCEEEEEecc----CCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCc-eEEEEEcccCCCcCCeEEE
Q 010571 253 DENWYIVGGG----DNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE-HHLVAFGGYNGKYNNEVFV 327 (507)
Q Consensus 253 ~~~l~v~GG~----~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~l~v~GG~~~~~~~~v~~ 327 (507)
++++|+.-+. ......+.++++|+.+.+-..--.+.. ....+.+..++ ..||+.-+. .+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--------~~~~lavs~D~~~~ly~tn~~----~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--------EIDSINVSQDEKPLLYALSTG----DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--------EECEEEECSSSSCEEEEEETT----TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--------CcceEEECCCCCeEEEEEcCC----CCeEEE
Confidence 5689986431 122235789999999887544222211 11122233333 467775432 478999
Q ss_pred EECCCCC
Q 010571 328 MRLKPRD 334 (507)
Q Consensus 328 ~~~~~~~ 334 (507)
||..+.+
T Consensus 359 iD~~t~k 365 (386)
T 3sjl_D 359 HDAESGE 365 (386)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9987664
No 312
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=82.56 E-value=51 Score=34.53 Aligned_cols=60 Identities=7% Similarity=-0.025 Sum_probs=29.9
Q ss_pred cEEEEECCC---C---cEEeeeecCCCCCCCcceEE--EEECCEEEEEeccCCCCCcceEEEEEcCcCe
Q 010571 220 DLHVLDLQT---N---EWSQPEIKGDLVTGRAGHAG--ITIDENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 220 ~i~~~d~~~---~---~W~~~~~~~~~p~~r~~~~~--~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
.++++|+.+ + ....+.........-..... ..-+++++++.- +.......++++|..+..
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~-~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWL-RRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEE-ESSTTEEEEEEEEEETTT
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEe-CCCCCEEEEEEEECCCCc
Confidence 588999988 7 66665310000001111122 233677555432 122233468888887765
No 313
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=82.49 E-value=7 Score=37.56 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=21.1
Q ss_pred chhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccch
Q 010571 387 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHS 427 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 427 (507)
|-+++...+....+++..+.+....+....+.+..++....
T Consensus 29 L~kye~~V~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~ 69 (411)
T 3ghg_C 29 LSTYQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYN 69 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhccchhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhc
Confidence 44455555555555655555554444555555554444433
No 314
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=82.40 E-value=2 Score=32.08 Aligned_cols=9 Identities=33% Similarity=0.586 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q 010571 467 IENEVQILR 475 (507)
Q Consensus 467 ~e~e~~~~~ 475 (507)
|++|++.|+
T Consensus 80 Lq~E~erLr 88 (100)
T 1go4_E 80 LQAECERLR 88 (100)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 315
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=82.35 E-value=4.6 Score=28.10 Aligned_cols=27 Identities=26% Similarity=0.397 Sum_probs=12.0
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHH
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQ 437 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~ 437 (507)
-+..|-..++++..+.+-+..|+...+
T Consensus 31 vk~DLI~rvdELt~E~e~l~~El~s~~ 57 (77)
T 2w83_C 31 VKNDLIAKVDELTCEKDVLQGELEAVK 57 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 344454455555544444433333333
No 316
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=82.34 E-value=16 Score=28.46 Aligned_cols=13 Identities=15% Similarity=0.054 Sum_probs=5.4
Q ss_pred HHhhHhhhhhhhh
Q 010571 436 VQGQLVAERSRCF 448 (507)
Q Consensus 436 ~~~~~~~~~~~~~ 448 (507)
++.++..+++.+.
T Consensus 67 ~E~di~~lrK~lD 79 (119)
T 3ol1_A 67 AENTLQSFRQDVD 79 (119)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccc
Confidence 3344444444433
No 317
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=82.28 E-value=23 Score=30.28 Aligned_cols=154 Identities=11% Similarity=0.086 Sum_probs=78.1
Q ss_pred EEEECCEEEEEcCCCCCccCCceEEEECCCC--ceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcc
Q 010571 33 AAVFDQKLYIVGGSRNGRFLSDVQVFDLRSL--AWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGG 108 (507)
Q Consensus 33 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~--~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG 108 (507)
++.+++.+|+|=| +.+|+++.... .....+.... ....| .... ++... ++++|+|-|
T Consensus 12 i~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~----------w~glP-~~ID-Aa~~~~~~~~~yfFkG 72 (195)
T 1itv_A 12 IAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADK----------WPALP-RKLD-SVFEEPLSKKLFFFSG 72 (195)
T ss_dssp EEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHH----------CTTSC-SSCS-EEEECTTTCCEEEEET
T ss_pred EEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhc----------cCCCC-CCcc-EEEEECCCCeEEEEeC
Confidence 4457999999987 45777776542 1211111100 01112 2222 22222 688999977
Q ss_pred cCCCCCCcceEEEEECCCCcEEEeecCC-CCCCC--cccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEE---
Q 010571 109 HYKKSSDSMIVRFIDLETNLCGVMETSG-KVPVA--RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDA--- 182 (507)
Q Consensus 109 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g-~~p~~--r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~--- 182 (507)
. .+|+|+..+..- ...... .+|.. ....+....++++|+|-|. ..+.||..+.+-..
T Consensus 73 ~--------~yw~~~~~~~~~-Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~--------~ywr~d~~~~~~~~gyP 135 (195)
T 1itv_A 73 R--------QVWVYTGASVLG-PRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR--------RLWRFDVKAQMVDPRSA 135 (195)
T ss_dssp T--------EEEEEETTEEEE-EEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT--------EEEEEETTTTEECGGGC
T ss_pred C--------EEEEEcCCccCC-CEEeeecccCCCccceeEEEEcCCCeEEEEeCC--------EEEEEeCCcccccCCCc
Confidence 3 478887553221 111110 12321 2222222225699999663 57889987653211
Q ss_pred --ee-cCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEE
Q 010571 183 --VE-VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 183 --~~-~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
+. .=..+|. .-.++... ++.+|+|-| +..|.||..+..-.
T Consensus 136 r~i~~~w~Gvp~--~idaa~~~-~g~~Yffkg-------~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 136 SEVDRMFPGVPL--DTHDVFQF-REKAYFCQD-------RFYWRVSSRSELNQ 178 (195)
T ss_dssp EEHHHHSTTSCS--SCSEEEEE-TTEEEEEET-------TEEEEEECCTTCCE
T ss_pred cChhhcCCCCCC--CCCEEEEe-CCeEEEEeC-------CEEEEEECCccEEe
Confidence 10 0001222 22344444 477999988 57899998766533
No 318
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=82.18 E-value=30 Score=31.54 Aligned_cols=100 Identities=10% Similarity=0.089 Sum_probs=52.0
Q ss_pred ECCEEEEEcccCCCCCCcceEEEEECC-CCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcC
Q 010571 99 WGTKLLILGGHYKKSSDSMIVRFIDLE-TNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 99 ~~~~iyv~GG~~~~~~~~~~~~~~d~~-t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~ 176 (507)
.++.||+... ...++.||+. ...|.... . .. ...+.+.. ++.+|+. .. ...++.||+.
T Consensus 106 ~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~---~--~~-~~~~~~~~~~g~l~vg-t~------~~~l~~~d~~ 165 (330)
T 3hxj_A 106 FEDILYVTSM-------DGHLYAINTDGTEKWRFKT---K--KA-IYATPIVSEDGTIYVG-SN------DNYLYAINPD 165 (330)
T ss_dssp ETTEEEEECT-------TSEEEEECTTSCEEEEEEC---S--SC-CCSCCEECTTSCEEEE-CT------TSEEEEECTT
T ss_pred ECCEEEEEec-------CCEEEEEcCCCCEEEEEcC---C--Cc-eeeeeEEcCCCEEEEE-cC------CCEEEEECCC
Confidence 3888887532 2348899988 33465442 1 11 11222333 5566663 22 2469999987
Q ss_pred CCc--EEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCC-CcEEe
Q 010571 177 TMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQ 233 (507)
Q Consensus 177 t~~--W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~-~~W~~ 233 (507)
++ |.... +.. ...+++...++.+|+.. ..++.||... ..|..
T Consensus 166 -g~~~~~~~~-----~~~-~~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~ 210 (330)
T 3hxj_A 166 -GTEKWRFKT-----NDA-ITSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNF 210 (330)
T ss_dssp -SCEEEEEEC-----SSC-CCSCCEECTTCCEEEES--------SSEEEECTTSCEEEEE
T ss_pred -CCEeEEEec-----CCC-ceeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEE
Confidence 43 54432 111 12333443466566643 4588888432 24655
No 319
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=82.15 E-value=30 Score=31.57 Aligned_cols=204 Identities=9% Similarity=-0.007 Sum_probs=99.0
Q ss_pred CCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CC
Q 010571 24 RPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GT 101 (507)
Q Consensus 24 ~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~ 101 (507)
+|.+...+++++. ++.||+.-- ....+++||+.+.. ......+ . .-++++.. ++
T Consensus 28 ~p~~~~pegia~~~~g~lyv~d~-----~~~~I~~~d~~g~~-~~~~~~~-----------------~-~p~gia~~~dG 83 (306)
T 2p4o_A 28 FPVNTFLENLASAPDGTIFVTNH-----EVGEIVSITPDGNQ-QIHATVE-----------------G-KVSGLAFTSNG 83 (306)
T ss_dssp ECTTCCEEEEEECTTSCEEEEET-----TTTEEEEECTTCCE-EEEEECS-----------------S-EEEEEEECTTS
T ss_pred CCCCCCcceEEECCCCCEEEEeC-----CCCeEEEECCCCce-EEEEeCC-----------------C-CceeEEEcCCC
Confidence 4444555555553 566887743 13468999987642 2221111 1 12333332 56
Q ss_pred EEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCcE
Q 010571 102 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTW 180 (507)
Q Consensus 102 ~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W 180 (507)
+||+...... ...++.||+.+++...+. ..+..+.....+.. ++.+|+.-- ....++++|+.+..-
T Consensus 84 ~l~vad~~~~----~~~v~~~d~~~g~~~~~~---~~~~~~~~~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 84 DLVATGWNAD----SIPVVSLVKSDGTVETLL---TLPDAIFLNGITPLSDTQYLTADS------YRGAIWLIDVVQPSG 150 (306)
T ss_dssp CEEEEEECTT----SCEEEEEECTTSCEEEEE---ECTTCSCEEEEEESSSSEEEEEET------TTTEEEEEETTTTEE
T ss_pred cEEEEeccCC----cceEEEEcCCCCeEEEEE---eCCCccccCcccccCCCcEEEEEC------CCCeEEEEeCCCCcE
Confidence 7888653211 124888999998887665 23333332233322 446666431 134799999876432
Q ss_pred EEe--ecCCC--CCCCC-CCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCC-CcEEeeeecCCCCCCCcceEEEEE-C
Q 010571 181 DAV--EVTQT--PPAPR-YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITI-D 253 (507)
Q Consensus 181 ~~~--~~~g~--~p~~r-~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~-~ 253 (507)
... ..... .+... .........++.||+.--. .+.|++|++.. +.............| ..+++- +
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~d 222 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVE 222 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTT
T ss_pred eEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCC-----CCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCC
Confidence 111 11000 11111 1112223345568876432 36799999865 222111100111111 122222 5
Q ss_pred CEEEEEeccCCCCCcceEEEEEcC
Q 010571 254 ENWYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~d~~~~d~~ 277 (507)
+++|+.-.. .+.+.+||+.
T Consensus 223 G~l~va~~~-----~~~V~~~~~~ 241 (306)
T 2p4o_A 223 GNLYGATHI-----YNSVVRIAPD 241 (306)
T ss_dssp CCEEEECBT-----TCCEEEECTT
T ss_pred CCEEEEeCC-----CCeEEEECCC
Confidence 678877432 2358889886
No 320
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=81.81 E-value=7.5 Score=27.61 Aligned_cols=31 Identities=10% Similarity=0.171 Sum_probs=15.0
Q ss_pred chhhHHhHHHHHhhHhhhhhhhhhHHHHHHH
Q 010571 426 HSELSKELSSVQGQLVAERSRCFKLEAQIAE 456 (507)
Q Consensus 426 ~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e 456 (507)
.++....++..+..++.+++++..+++.+++
T Consensus 8 ~e~~~~klq~~E~rN~~Le~~v~~le~~Le~ 38 (79)
T 3cvf_A 8 REETQQKVQDLETRNAELEHQLRAMERSLEE 38 (79)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3334444555555555555555555554443
No 321
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.56 E-value=33 Score=31.68 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=57.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~ 178 (507)
++.+++.|+.+. .+.+||+.++.-.... .......-.+++.. ++.+++.|+.+ ..+.+||+.+.
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~---~~~~~~~i~~~~~~pdg~~lasg~~d------g~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVH---SAKSDVEYSSGVLHKDSLLLALYSPD------GILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEE---CCCSSCCCCEEEECTTSCEEEEECTT------SCEEEEESSCT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEE---ecCCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCC
Confidence 456667676432 3889999888764433 11111112222222 45777777754 35999999877
Q ss_pred cEE--EeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 179 TWD--AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 179 ~W~--~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
+-. .+. + .....-.++....++..++.|+ + +.+.+||+.+..
T Consensus 203 ~~~~~~~~--~--~h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 DQASSRFP--V--DEEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDV 246 (343)
T ss_dssp TSCCEECC--C--CTTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSST
T ss_pred CCCccEEe--c--cCCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCC
Confidence 643 221 1 0111112233335555666666 2 268899987653
No 322
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=81.06 E-value=4.1 Score=30.26 Aligned_cols=7 Identities=14% Similarity=0.425 Sum_probs=2.6
Q ss_pred HhhHHHH
Q 010571 392 DAIKEDK 398 (507)
Q Consensus 392 ~~l~~~~ 398 (507)
+.|+++.
T Consensus 38 eeLQ~Ei 44 (107)
T 2k48_A 38 QELQENI 44 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 323
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=80.86 E-value=39 Score=32.07 Aligned_cols=70 Identities=9% Similarity=0.067 Sum_probs=38.7
Q ss_pred CCEEEEEeccCC----CCCcceEEEEEcCcCee-EEeccCCCCCCCCCCCCceEEEEEcCce-EEEEEcccCCCcCCeEE
Q 010571 253 DENWYIVGGGDN----NNGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEH-HLVAFGGYNGKYNNEVF 326 (507)
Q Consensus 253 ~~~l~v~GG~~~----~~~~~d~~~~d~~~~~W-~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~l~v~GG~~~~~~~~v~ 326 (507)
++++|+...... ....++++++|..+.+- ..++ .+. ......+.+++. .+|+..+. .+++.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~--------~p~~i~~s~Dg~~~l~v~~~~----~~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGH--------DVDAISVAQDGGPDLYALSAG----TEVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCC--------CcCeEEECCCCCeEEEEEcCC----CCeEE
Confidence 357888653211 11346899999988765 3332 211 112233444444 56664422 37899
Q ss_pred EEECCCCCC
Q 010571 327 VMRLKPRDI 335 (507)
Q Consensus 327 ~~~~~~~~w 335 (507)
++|+.+.+-
T Consensus 345 ViD~~t~~v 353 (373)
T 2mad_H 345 IYDAGAGDQ 353 (373)
T ss_pred EEECCCCCE
Confidence 999876543
No 324
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=80.78 E-value=30 Score=35.92 Aligned_cols=108 Identities=10% Similarity=0.011 Sum_probs=54.0
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCC---CccCcEEEEEcCCCcEEEeecCCCCCCC
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSR---KLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~---~~~~~~~~~d~~t~~W~~~~~~g~~p~~ 192 (507)
.++++|+.+++-..+...... .......+.+ +++.++++..+... .....++.+|+.+++-..+..... ...
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~--~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-~~~ 114 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKI--ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV-SNA 114 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTT--TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC-CSC
T ss_pred CEEEEECCCCcEEEEeccccc--cccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc-ccc
Confidence 488888888866555421111 0001122233 45545554432211 124679999999887655542111 001
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeee
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
. ....+...++..++++.. +.++++|+.++....+.
T Consensus 115 ~-~~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 115 K-LQYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp C-CSBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred c-ccccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 1 112223334434444442 47889988877665543
No 325
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=80.52 E-value=33 Score=33.63 Aligned_cols=156 Identities=7% Similarity=-0.035 Sum_probs=78.2
Q ss_pred eEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEccc
Q 010571 32 AAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGH 109 (507)
Q Consensus 32 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 109 (507)
+++.+.+.+|+|-| .-+|+++.....+...+-... +...| .... ++... ++++|+|=|.
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~----------Wp~LP-~~iD-Aa~~~~~~g~~~fFKg~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVF----------WPQLP-NGLE-AAYEFADRDEVRFFKGN 327 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGT----------CTTSC-SSCC-EEEEEGGGTEEEEEETT
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHh----------ccCCC-CCee-EEEEEcCCCeEEEEeCC
Confidence 44557999999988 345666654433322211111 11122 2222 22222 6899999763
Q ss_pred CCCCCCcceEEEEECCCC---cEEEee-cCCCCCC-CcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEE-
Q 010571 110 YKKSSDSMIVRFIDLETN---LCGVME-TSGKVPV-ARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWD- 181 (507)
Q Consensus 110 ~~~~~~~~~~~~~d~~t~---~W~~~~-~~g~~p~-~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~- 181 (507)
.+|+|+..+. -=+.+. .. ..|. +..--++... ++++|+|-|. ..|.||..+.+-.
T Consensus 328 --------~~W~~~~~~~~~gyP~~i~~~~-g~P~~~~~IDAA~~~~~~~k~yfFkG~--------~yw~yd~~~~~~~~ 390 (450)
T 1su3_A 328 --------KYWAVQGQNVLHGYPKDIYSSF-GFPRTVKHIDAALSEENTGKTYFFVAN--------KYWRYDEYKRSMDP 390 (450)
T ss_dssp --------EEEEEETTEECTTCSEEHHHHH-CCCTTCCCCCEEEEETTTTEEEEEETT--------EEEEEETTTTEECS
T ss_pred --------EEEEecCCcccCCCceeeehhh-cCCCCCCccceEEEEcCCCeEEEEeCC--------EEEEEeCCCccccC
Confidence 3778764321 001111 01 1222 1111233333 5799999763 5888987653321
Q ss_pred ----Eeec-CCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 182 ----AVEV-TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 182 ----~~~~-~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
.+.. -...| .... ++. ..++++|+|-| +..|+||..+..-..
T Consensus 391 gYPk~I~~~fpgip-~~iD-AA~-~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 391 GYPKMIAHDFPGIG-HKVD-AVF-MKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp SCSEEHHHHSTTSC-SCCS-EEE-EETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCcchhhcCCCCC-CCcc-EEE-EcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 1110 00122 1222 333 34678999988 678999988776554
No 326
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=80.41 E-value=2.6 Score=31.01 Aligned_cols=10 Identities=10% Similarity=0.169 Sum_probs=3.7
Q ss_pred HHHHHHHhHH
Q 010571 470 EVQILRQQKS 479 (507)
Q Consensus 470 e~~~~~~~~~ 479 (507)
++.++.++++
T Consensus 64 ~l~~~e~eLe 73 (89)
T 2lw1_A 64 DMAAAEQELE 73 (89)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 327
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=79.90 E-value=37 Score=31.15 Aligned_cols=187 Identities=11% Similarity=-0.062 Sum_probs=88.7
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCC------------CccCCceEEEECCCCceeEee
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRN------------GRFLSDVQVFDLRSLAWSNLR 69 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~------------~~~~~~~~~~d~~t~~W~~~~ 69 (507)
+.+.||+.....+.+.....-......+.+++. ++.||+.-.... ......+++||+.++....+.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 456777766655554321000001122334433 467887642110 012346999999888765543
Q ss_pred eccccccCccccCCccCCCCCccceeeEEE-C-CEEEEEcccCCCCCCcceEEEEECCC---CcEEEeecCCCCCCCccc
Q 010571 70 LETELDADKTEDSGLLEVLPPMSDHCMVKW-G-TKLLILGGHYKKSSDSMIVRFIDLET---NLCGVMETSGKVPVARGG 144 (507)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~d~~t---~~W~~~~~~g~~p~~r~~ 144 (507)
... ..-..++.. + +.||+.-.. ...+++|++.+ ...+.+. ..+.
T Consensus 182 ~~~------------------~~p~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~---~~~g---- 230 (322)
T 2fp8_A 182 KEL------------------HVPGGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLV---KIPN---- 230 (322)
T ss_dssp EEE------------------SCCCEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEE---ECSS----
T ss_pred cCC------------------ccCcceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEE---eCCC----
Confidence 211 111223332 3 457876321 24589999875 3444433 1221
Q ss_pred ceEEEE--CCEEEEEcCcCCCC----CccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCC
Q 010571 145 HSVTLV--GSRLIIFGGEDRSR----KLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFF 218 (507)
Q Consensus 145 ~~~~~~--~~~l~~~GG~~~~~----~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~ 218 (507)
...+.+ ++.||+........ ...+.+.+||+....-..+......+ ....+.+...++.|||.+.. .
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~--~~~~~~~~~~~g~L~v~~~~-----~ 303 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA--GEHFEQIQEHDGLLYIGTLF-----H 303 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT--TSCCCEEEEETTEEEEECSS-----C
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc--cccceEEEEeCCEEEEeecC-----C
Confidence 122233 35787764321000 01346899998644444443211111 12233344457778876432 2
Q ss_pred CcEEEEECCC
Q 010571 219 NDLHVLDLQT 228 (507)
Q Consensus 219 ~~i~~~d~~~ 228 (507)
+.|.+|++..
T Consensus 304 ~~i~~~~~~~ 313 (322)
T 2fp8_A 304 GSVGILVYDK 313 (322)
T ss_dssp SEEEEEEC--
T ss_pred CceEEEeccc
Confidence 5688887653
No 328
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=79.72 E-value=28 Score=29.72 Aligned_cols=106 Identities=13% Similarity=0.183 Sum_probs=56.7
Q ss_pred ECCEEEEEcccCCCCCCcceEEEEECCCCc---EEEeecCC-CCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEE
Q 010571 99 WGTKLLILGGHYKKSSDSMIVRFIDLETNL---CGVMETSG-KVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 99 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~---W~~~~~~g-~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~ 172 (507)
.++++|+|-|. .+|+|+..+.. =+.+...+ .+|..... ++... ++++|+|-|. ..+.
T Consensus 60 ~~g~~yfFkg~--------~yw~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG~--------~yw~ 122 (196)
T 3c7x_A 60 KDGKFVFFKGD--------KHWVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRGN--------KYYR 122 (196)
T ss_dssp TTSCEEEEETT--------EEEEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEETT--------EEEE
T ss_pred CCCcEEEecCC--------EEEEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEECC--------EEEE
Confidence 46889999762 47888754211 11222111 13322222 23322 5799998763 5788
Q ss_pred EEcCCCcEEE-----eecCCCCCCCCCCceEEEEcCc-EEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 173 LDLETMTWDA-----VEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 173 ~d~~t~~W~~-----~~~~g~~p~~r~~~~~~~~~~~-~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
||..+.+-.. +..-..+|. .-.++....++ ++|+|-| +..|+||..+..
T Consensus 123 yd~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 123 FNEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp EETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred EeCCcccccCCCCccHHHCCCcCC--CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 9876643211 110001222 22344444444 8999988 678999987754
No 329
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=79.29 E-value=14 Score=36.58 Aligned_cols=9 Identities=22% Similarity=0.464 Sum_probs=5.4
Q ss_pred EECCEEEEE
Q 010571 149 LVGSRLIIF 157 (507)
Q Consensus 149 ~~~~~l~~~ 157 (507)
.+++++|.+
T Consensus 112 ~~dGk~Ygl 120 (471)
T 3mq9_A 112 RYNGKLIAY 120 (471)
T ss_dssp EETTEECEE
T ss_pred EECCEEEEE
Confidence 356776654
No 330
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=79.03 E-value=8.1 Score=29.65 Aligned_cols=18 Identities=11% Similarity=0.172 Sum_probs=7.5
Q ss_pred HHHHHHHHHhHHHHHHHH
Q 010571 468 ENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 468 e~e~~~~~~~~~~~~~~~ 485 (507)
..++..+.++++.++.++
T Consensus 84 ~~~i~~l~~~~~~l~~~~ 101 (112)
T 1l8d_A 84 IDRKSELERELRRIDMEI 101 (112)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444444444443
No 331
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=78.63 E-value=26 Score=28.66 Aligned_cols=26 Identities=12% Similarity=0.290 Sum_probs=11.5
Q ss_pred hhhHHHHHHhhccchhhHHhHHHHHh
Q 010571 413 SRFREKIDEVNSTHSELSKELSSVQG 438 (507)
Q Consensus 413 ~~l~~~~~~~~~~~~~~~~e~~~~~~ 438 (507)
..|+..++.++..+..+..++...+.
T Consensus 53 ~eL~~~~~~Le~~n~~L~~~lke~~~ 78 (155)
T 2oto_A 53 EELEKAKQALEDQRKDLETKLKELQQ 78 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444333
No 332
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=78.17 E-value=4.1 Score=25.61 Aligned_cols=41 Identities=12% Similarity=0.289 Sum_probs=25.0
Q ss_pred hhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHH
Q 010571 414 RFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQI 454 (507)
Q Consensus 414 ~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~ 454 (507)
+|-++++.++.++.-+++||+..-.++.+++.+...+++-+
T Consensus 7 QL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevl 47 (54)
T 1deb_A 7 QLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVL 47 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHH
Confidence 44555666667777777777766666666555555444433
No 333
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=77.67 E-value=32 Score=29.29 Aligned_cols=152 Identities=13% Similarity=0.095 Sum_probs=80.8
Q ss_pred eeEEECCEEEEEcccCCCCCCcceEEEEECCC--CcEEEeecC---CCCCCCcccceEEEE--CCEEEEEcCcCCCCCcc
Q 010571 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLET--NLCGVMETS---GKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLL 167 (507)
Q Consensus 95 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t--~~W~~~~~~---g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~ 167 (507)
+++.+++++|+|=|. .+|+++... ......... ..+|... -++... ++++|+|-|.
T Consensus 11 Ai~~~~g~~yfFkg~--------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~I--DAa~~~~~~~~~yfFkG~------- 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG--------KYWRFSEGRGSRPQGPFLIADKWPALPRKL--DSVFEEPLSKKLFFFSGR------- 73 (195)
T ss_dssp EEEEETTEEEEEETT--------EEEEECCSSSCCCEEEEEHHHHCTTSCSSC--SEEEECTTTCCEEEEETT-------
T ss_pred EEEEeCCEEEEEECC--------EEEEEECCccccCCCcEEhhhccCCCCCCc--cEEEEECCCCeEEEEeCC-------
Confidence 355579999999763 378887655 223222211 1234321 122222 5789998773
Q ss_pred CcEEEEEcCCCcE-EEeecCCCCCCC--CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe--eee-cCCCC
Q 010571 168 NDVHFLDLETMTW-DAVEVTQTPPAP--RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ--PEI-KGDLV 241 (507)
Q Consensus 168 ~~~~~~d~~t~~W-~~~~~~g~~p~~--r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~--~~~-~~~~p 241 (507)
..+.|+..+..- ..+..-| +|.. ... ++....++++|+|-| +..|+||..+.+-.. +.. ...+|
T Consensus 74 -~yw~~~~~~~~~Pk~i~~~G-~p~~~~~iD-AA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~ 143 (195)
T 1itv_A 74 -QVWVYTGASVLGPRRLDKLG-LGADVAQVT-GALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFP 143 (195)
T ss_dssp -EEEEEETTEEEEEEEGGGGT-CCTTCCCCC-EEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHST
T ss_pred -EEEEEcCCccCCCEEeeecc-cCCCcccee-EEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCC
Confidence 477776542111 0111112 2321 222 333345678999988 678999987754221 000 00111
Q ss_pred -CCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCe
Q 010571 242 -TGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 242 -~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
.|..-.++...++.+|+|-|. ..|.||..+..
T Consensus 144 Gvp~~idaa~~~~g~~Yffkg~-------~y~~~~~~~~~ 176 (195)
T 1itv_A 144 GVPLDTHDVFQFREKAYFCQDR-------FYWRVSSRSEL 176 (195)
T ss_dssp TSCSSCSEEEEETTEEEEEETT-------EEEEEECCTTC
T ss_pred CCCCCCCEEEEeCCeEEEEeCC-------EEEEEECCccE
Confidence 122234666668999999763 57888876664
No 334
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=77.65 E-value=60 Score=32.34 Aligned_cols=179 Identities=10% Similarity=0.058 Sum_probs=83.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t 177 (507)
++..++.|+.+. .+.++|..+..-..+. .. .....++.+ ++..++.|+.+ ..+..||...
T Consensus 314 ~~~~l~t~~~d~------~i~~w~~~~~~~~~~~---~~---~~~v~~~~~s~~g~~l~~~~~d------g~v~~~~~~~ 375 (577)
T 2ymu_A 314 DGQTIASASDDK------TVKLWNRNGQHLQTLT---GH---SSSVWGVAFSPDGQTIASASDD------KTVKLWNRNG 375 (577)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEEC---CC---SSCEEEEEECTTSSEEEEEETT------SEEEEEETTC
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeEEEe---CC---CCCEEEEEECCCCCEEEEEeCC------CEEEEEcCCC
Confidence 455666665332 3777887666544432 11 111122223 44566666543 2477788654
Q ss_pred CcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCE
Q 010571 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN 255 (507)
Q Consensus 178 ~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 255 (507)
..-..+.. . ...-.+++...++..++.|+.+ ..+.+||.....-..+. + ....-.++.+ ++.
T Consensus 376 ~~~~~~~~--~---~~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~--~----~~~~v~~~~~s~d~~ 439 (577)
T 2ymu_A 376 QLLQTLTG--H---SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLT--G----HSSSVWGVAFSPDDQ 439 (577)
T ss_dssp CEEEEEEC--C---SSCEEEEEECTTSSCEEEEETT-----SEEEEECTTCCEEEEEE--C----CSSCEEEEEECTTSS
T ss_pred CEEEEecC--C---CCCeEEEEECCCCCEEEEEeCC-----CEEEEEeCCCCEEEEec--C----CCCCeEEEEECCCCC
Confidence 43333321 1 1111123333455566666654 35777876443333321 1 1111122333 566
Q ss_pred EEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEEC
Q 010571 256 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 256 l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
+++.++.++ .+.+||.+...-..+... ......+.+..+..+++.|+.+ ..+.++|.
T Consensus 440 ~l~~~~~d~-----~v~~w~~~~~~~~~~~~~---------~~~v~~~~~spd~~~las~~~d----~~i~iw~~ 496 (577)
T 2ymu_A 440 TIASASDDK-----TVKLWNRNGQLLQTLTGH---------SSSVRGVAFSPDGQTIASASDD----KTVKLWNR 496 (577)
T ss_dssp EEEEEETTS-----EEEEEETTSCEEEEEECC---------SSCEEEEEECTTSCEEEEEETT----SEEEEEET
T ss_pred EEEEEcCCC-----EEEEEECCCCEEEEEcCC---------CCCEEEEEEcCCCCEEEEEeCC----CEEEEEcC
Confidence 777766443 467788765544433221 1122233344444566666654 34555564
No 335
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=77.65 E-value=17 Score=26.98 Aligned_cols=13 Identities=31% Similarity=0.450 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHhH
Q 010571 466 TIENEVQILRQQK 478 (507)
Q Consensus 466 ~~e~e~~~~~~~~ 478 (507)
.++.++.++++++
T Consensus 86 alq~KiaeLKrqL 98 (107)
T 2k48_A 86 TLETKLGELKRQL 98 (107)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 336
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=77.53 E-value=8 Score=30.58 Aligned_cols=12 Identities=33% Similarity=0.141 Sum_probs=4.9
Q ss_pred HHHHHHHHHHhH
Q 010571 467 IENEVQILRQQK 478 (507)
Q Consensus 467 ~e~e~~~~~~~~ 478 (507)
++++..++++++
T Consensus 101 ~e~r~~~L~~ql 112 (135)
T 2e7s_A 101 IEILNKRLTEQL 112 (135)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 333444444433
No 337
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=77.43 E-value=8.1 Score=27.66 Aligned_cols=17 Identities=12% Similarity=0.243 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHhHHH
Q 010571 464 SQTIENEVQILRQQKSA 480 (507)
Q Consensus 464 ~~~~e~e~~~~~~~~~~ 480 (507)
++.++++++...+.+..
T Consensus 60 i~~le~~i~rhk~~i~~ 76 (84)
T 1gmj_A 60 IERLQKEIERHKQSIKK 76 (84)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444443333333
No 338
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=77.36 E-value=74 Score=33.27 Aligned_cols=114 Identities=11% Similarity=0.146 Sum_probs=53.1
Q ss_pred cEEEEEcCC---C---cEEEeecCCCC-CCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc--EEeeeecC-
Q 010571 169 DVHFLDLET---M---TWDAVEVTQTP-PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKG- 238 (507)
Q Consensus 169 ~~~~~d~~t---~---~W~~~~~~g~~-p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~- 238 (507)
.++++|+.+ + ++..+...... ....+........+++++++--... .....|+.+|+.++. |.......
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~-~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRI-QNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS-TTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC-CCEEEEEEEECCCCccccceeEEEEe
Confidence 588899988 7 67666421000 0112222233345666544432111 112358888988765 43321110
Q ss_pred --CCCCCC-----cceEEEEECCEEEE-EeccCCCCCcceEEEEEcCcCeeEEec
Q 010571 239 --DLVTGR-----AGHAGITIDENWYI-VGGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 239 --~~p~~r-----~~~~~~~~~~~l~v-~GG~~~~~~~~d~~~~d~~~~~W~~~~ 285 (507)
...... ....+..-+++.++ +... ......++++|..+..-..|.
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~--~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN--EEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEEC--TTSCEEEEEEETTCSSCEESC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEc--CCCceEEEEEECCCCceEecc
Confidence 000000 11112223444433 4332 223578999998877655543
No 339
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=77.31 E-value=16 Score=34.19 Aligned_cols=11 Identities=9% Similarity=0.214 Sum_probs=4.4
Q ss_pred HHhhHHHHHHH
Q 010571 391 IDAIKEDKRVL 401 (507)
Q Consensus 391 ~~~l~~~~~~~ 401 (507)
++.|+++...+
T Consensus 69 Ie~L~~~L~~~ 79 (390)
T 1deq_A 69 INKLRDSLFNY 79 (390)
T ss_pred HHHHHHHHHHH
Confidence 34444443333
No 340
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=77.00 E-value=23 Score=27.20 Aligned_cols=21 Identities=10% Similarity=0.313 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~ 486 (507)
.+++++..++++...++..+.
T Consensus 88 ~le~~~~~l~~~l~~lk~~l~ 108 (117)
T 2zqm_A 88 ALERQEKKLNEKLKELTAQIQ 108 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555554
No 341
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=76.97 E-value=8.7 Score=26.58 Aligned_cols=29 Identities=14% Similarity=0.330 Sum_probs=15.1
Q ss_pred hHHHHHHhhccchhhHHhHHHHHhhHhhh
Q 010571 415 FREKIDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 415 l~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 443 (507)
|+..++.+..+.+++.+.+...++++...
T Consensus 4 L~k~i~~l~~E~eel~~klk~~~ee~~~~ 32 (71)
T 1s1c_X 4 LTKDIEILRRENEELTEKMKKAEEEYKLE 32 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555544443
No 342
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=76.53 E-value=3.8 Score=23.39 Aligned_cols=27 Identities=22% Similarity=0.323 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010571 464 SQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 464 ~~~~e~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
..+||.+.+++.++++.++.|.+.+++
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 345666777777777777777765554
No 343
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=76.33 E-value=78 Score=33.02 Aligned_cols=153 Identities=7% Similarity=-0.053 Sum_probs=78.8
Q ss_pred ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEE--ECCEEEEEcCcCCCCCccCcEEEEEcC
Q 010571 99 WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 99 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~--~~~~l~~~GG~~~~~~~~~~~~~~d~~ 176 (507)
.+++||+.-.. ...|.++++....-..+... .+..++ .+++ .++.||+.--. ....|+++++.
T Consensus 463 ~~g~LY~tD~~------~~~I~v~d~dg~~~~~l~~~-~~~~P~---giavDp~~g~ly~td~~-----~~~~I~~~~~d 527 (699)
T 1n7d_A 463 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFRE-QGSKPR---AIVVDPVHGFMYWTDWG-----TPAKIKKGGLN 527 (699)
T ss_dssp SSSBCEECCTT------TSCEEEEBSSSCCEEEECCC-SSCCCC---CEECCSSSSCCEECCCS-----SSCCEEBCCSS
T ss_pred eCCcEEEEecc------CCeEEEEecCCCceEEEEeC-CCCCcc---eEEEccCCCcEEEcccC-----CCCeEEEEeCC
Confidence 36788886321 33588999887654444321 112221 1222 24677764311 12468888876
Q ss_pred CCcEEEeecCCCCCCCCCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeec-CCCCCCCcceEEEEECC
Q 010571 177 TMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK-GDLVTGRAGHAGITIDE 254 (507)
Q Consensus 177 t~~W~~~~~~g~~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~-~~~p~~r~~~~~~~~~~ 254 (507)
...-..+... .+..| .++++- .++.||+.-.. .+.|+++++....-+.+... +.++ ..+++++..+
T Consensus 528 G~~~~~l~~~-~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~---~P~glavd~~ 595 (699)
T 1n7d_A 528 GVDIYSLVTE-NIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLA---HPFSLAVFED 595 (699)
T ss_dssp SCCCCEESCS-SCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCS---SCCCCEEETT
T ss_pred CCCeeEEEeC-CCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCC---CceEeEEECC
Confidence 5433333211 11111 233333 34668886542 36789999875443333111 1122 2335666788
Q ss_pred EEEEEeccCCCCCcceEEEEEcCcCeeEE
Q 010571 255 NWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 255 ~l~v~GG~~~~~~~~d~~~~d~~~~~W~~ 283 (507)
.||+.-.. ...|.++|+.+..-..
T Consensus 596 ~lywtd~~-----~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 596 KVFWTDII-----NEAIFSANRLTGSDVN 619 (699)
T ss_dssp EEEEECST-----TTCEEEEETTTEEEEE
T ss_pred EEEEEeCC-----CCeEEEEEccCCCceE
Confidence 88888532 2358888876655433
No 344
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=76.19 E-value=14 Score=24.91 Aligned_cols=44 Identities=23% Similarity=0.309 Sum_probs=21.8
Q ss_pred hhhhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 446 RCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 446 ~~~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
+++++...+..++.+|-+-- +||.+.+-+++....+++.+.+++
T Consensus 18 EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k~~~d~~ 65 (74)
T 2q6q_A 18 EIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSDAN 65 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhccccc
Confidence 33444444445555554444 344444555555556666655443
No 345
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=76.10 E-value=71 Score=32.43 Aligned_cols=107 Identities=13% Similarity=0.207 Sum_probs=52.4
Q ss_pred cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcCc-
Q 010571 202 ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTK- 278 (507)
Q Consensus 202 ~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~~- 278 (507)
.++.+++.|+.+ +.+.+||+.+.....+...+ ......++.+ ++++++.|+.+. .+.++|..+
T Consensus 458 pdg~~lasgs~D-----~~v~lwd~~~~~~~~~~~~~----h~~~v~~v~fspdg~~las~s~d~-----~v~~w~~~~~ 523 (611)
T 1nr0_A 458 NDKQFVAVGGQD-----SKVHVYKLSGASVSEVKTIV----HPAEITSVAFSNNGAFLVATDQSR-----KVIPYSVANN 523 (611)
T ss_dssp TTSCEEEEEETT-----SEEEEEEEETTEEEEEEEEE----CSSCEEEEEECTTSSEEEEEETTS-----CEEEEEGGGT
T ss_pred CCCCEEEEeCCC-----CeEEEEEccCCceeeeeccC----CCCceEEEEECCCCCEEEEEcCCC-----CEEEEEcCCC
Confidence 344455555543 35777777666554332111 1111123333 556777766443 367788765
Q ss_pred CeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCC
Q 010571 279 LAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 279 ~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~ 332 (507)
..- +... ....+......+.+..+..+++.|+.+ ..+.++++..
T Consensus 524 ~~~--~~~~----~~~~H~~~V~~v~fspdg~~lasgs~D----~~v~lW~~~~ 567 (611)
T 1nr0_A 524 FEL--AHTN----SWTFHTAKVACVSWSPDNVRLATGSLD----NSVIVWNMNK 567 (611)
T ss_dssp TEE--SCCC----CCCCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTC
T ss_pred Cce--eeee----eeeecccceeEEEECCCCCEEEEEECC----CcEEEEECCC
Confidence 321 1110 001122234444555555567777765 4577777754
No 346
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=75.93 E-value=36 Score=28.99 Aligned_cols=154 Identities=12% Similarity=0.123 Sum_probs=76.6
Q ss_pred eeEEECCEEEEEcccCCCCCCcceEEEEECCC---CcEEEeecC-CCCCCCcccceEEEECCEEEEEcCcCCCCCccCcE
Q 010571 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLET---NLCGVMETS-GKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDV 170 (507)
Q Consensus 95 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t---~~W~~~~~~-g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~ 170 (507)
+++.+++++|+|-|. .+|+++... +-=..+... ..+|.. ...+....++++|+|-|. ..
T Consensus 10 A~~~~~g~~~fFkg~--------~~w~~~~~~~~~gyP~~I~~~w~glP~~-iDAa~~~~~g~~yfFkg~--------~y 72 (196)
T 3c7x_A 10 TVAMLRGEMFVFKER--------WFWRVRNNQVMDGYPMPIGQFWRGLPAS-INTAYERKDGKFVFFKGD--------KH 72 (196)
T ss_dssp EEEEETTEEEEEETT--------EEEEEETTEECTTCSEEHHHHSTTCCSS-CCEEEECTTSCEEEEETT--------EE
T ss_pred EEEEcCCEEEEEECC--------EEEEEECCccCCCCceEhhHhccCCCCC-ccEEEEeCCCcEEEecCC--------EE
Confidence 344678999999763 377775321 100111110 023432 221211235788888663 47
Q ss_pred EEEEcCCCcE---EEeecCC-CCCCCCCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe--eeecCCC-CC
Q 010571 171 HFLDLETMTW---DAVEVTQ-TPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ--PEIKGDL-VT 242 (507)
Q Consensus 171 ~~~d~~t~~W---~~~~~~g-~~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~--~~~~~~~-p~ 242 (507)
+.|+-.+... ..+...+ .+|..... ++... .++++|+|-| +..|+||..++.-.. +.....+ ..
T Consensus 73 w~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gi 144 (196)
T 3c7x_A 73 WVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGI 144 (196)
T ss_dssp EEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTC
T ss_pred EEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCc
Confidence 7787432110 1121111 13322222 23333 4678999988 678999987754322 0000111 11
Q ss_pred CCcceEEEEE-CC-EEEEEeccCCCCCcceEEEEEcCcCe
Q 010571 243 GRAGHAGITI-DE-NWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 243 ~r~~~~~~~~-~~-~l~v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
|..-.++... ++ .+|+|-|. ..|.||..+.+
T Consensus 145 p~~idaAf~~~~~~~~YfFkg~-------~y~r~d~~~~~ 177 (196)
T 3c7x_A 145 PESPRGSFMGSDEVFTYFYKGN-------KYWKFNNQKLK 177 (196)
T ss_dssp CSSCSEEEECTTSSEEEEEETT-------EEEEEETTTTE
T ss_pred CCCcceeEEecCCCEEEEEECC-------EEEEEECCcce
Confidence 2223344444 34 79988662 57889987764
No 347
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=75.71 E-value=4.1 Score=23.18 Aligned_cols=27 Identities=19% Similarity=0.147 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010571 464 SQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 464 ~~~~e~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
..+||.+.+++.++++.++.|...++.
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 345666777777777777777665543
No 348
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=75.57 E-value=12 Score=28.27 Aligned_cols=13 Identities=23% Similarity=0.468 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHhH
Q 010571 466 TIENEVQILRQQK 478 (507)
Q Consensus 466 ~~e~e~~~~~~~~ 478 (507)
.++.++.++++++
T Consensus 73 ~lq~KiaeLKrqL 85 (113)
T 4fi5_A 73 SIQAKIDELKRQL 85 (113)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 349
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=75.48 E-value=13 Score=35.76 Aligned_cols=13 Identities=8% Similarity=-0.061 Sum_probs=5.4
Q ss_pred hhHHhhHHHHHHH
Q 010571 389 TDIDAIKEDKRVL 401 (507)
Q Consensus 389 ~~~~~l~~~~~~~ 401 (507)
..+..|+....++
T Consensus 38 ~~l~~LE~~l~el 50 (409)
T 1m1j_C 38 GELLEIEGLLQQA 50 (409)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 3344444444433
No 350
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=75.37 E-value=3.6 Score=26.81 Aligned_cols=23 Identities=9% Similarity=0.068 Sum_probs=9.2
Q ss_pred hhHhhhhhhhhhHHHHHHHHHHH
Q 010571 438 GQLVAERSRCFKLEAQIAELQKM 460 (507)
Q Consensus 438 ~~~~~~~~~~~~~e~~~~e~~~~ 460 (507)
.+++.++.++..+.+++++++.+
T Consensus 26 ~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 26 LELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444444433
No 351
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=74.95 E-value=19 Score=29.14 Aligned_cols=21 Identities=19% Similarity=0.253 Sum_probs=9.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHH
Q 010571 467 IENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 467 ~e~e~~~~~~~~~~~~~~~~~ 487 (507)
.+++.+++++++..+..++++
T Consensus 82 ~~~ek~~r~e~k~~l~~ql~q 102 (150)
T 4dci_A 82 VAGKRSELEEQKRNLLQQQAQ 102 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444443
No 352
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=74.66 E-value=3.4 Score=38.46 Aligned_cols=12 Identities=17% Similarity=0.282 Sum_probs=4.5
Q ss_pred hhhhhhHHHHHH
Q 010571 444 RSRCFKLEAQIA 455 (507)
Q Consensus 444 ~~~~~~~e~~~~ 455 (507)
+.+++++++++.
T Consensus 39 ~~~i~~l~~~i~ 50 (323)
T 1lwu_C 39 QQFVTRLQQQLV 50 (323)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 353
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=74.34 E-value=46 Score=29.40 Aligned_cols=198 Identities=8% Similarity=-0.038 Sum_probs=105.8
Q ss_pred ceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEE
Q 010571 31 HAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLIL 106 (507)
Q Consensus 31 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~ 106 (507)
+++++. ++.||+.-. ....+++||+.+..-..+.... ...-+.++.. ++.||+.
T Consensus 39 ~gi~~d~~~~~ly~~d~-----~~~~I~~~~~~g~~~~~~~~~~-----------------~~~p~~ia~d~~~~~lyv~ 96 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDI-----SEPSIGRASLHGGEPTTIIRQD-----------------LGSPEGIALDHLGRTIFWT 96 (267)
T ss_dssp EEEEEETTTTEEEEEET-----TTTEEEEEESSSCCCEEEECTT-----------------CCCEEEEEEETTTTEEEEE
T ss_pred EEEEEecCCCEEEEEEC-----CCCEEEEEecCCCCcEEEEECC-----------------CCCccEEEEEecCCeEEEE
Confidence 455554 578888754 2356899998765433222110 1122344443 5789987
Q ss_pred cccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEee
Q 010571 107 GGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 184 (507)
Q Consensus 107 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~ 184 (507)
-.. .+.+.++++....-..+... .+..| ..+++- ++.||+..... ..+.++++++....-..+.
T Consensus 97 d~~------~~~I~~~~~~g~~~~~~~~~-~~~~P---~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~ 162 (267)
T 1npe_A 97 DSQ------LDRIEVAKMDGTQRRVLFDT-GLVNP---RGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILA 162 (267)
T ss_dssp ETT------TTEEEEEETTSCSCEEEECS-SCSSE---EEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEE
T ss_pred ECC------CCEEEEEEcCCCCEEEEEEC-CCCCc---cEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEE
Confidence 542 34688999876543333321 11111 223333 57899875321 1346888988654433332
Q ss_pred cCCCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccC
Q 010571 185 VTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGD 263 (507)
Q Consensus 185 ~~g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~ 263 (507)
.. .. ..-.+++.-. ++.||+.-.. .+.|++||+....-..+.. ....| ++++.-++.+|+....
T Consensus 163 ~~-~~---~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~--~~~~P---~gi~~d~~~lyva~~~- 227 (267)
T 1npe_A 163 QD-NL---GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLE--GLQYP---FAVTSYGKNLYYTDWK- 227 (267)
T ss_dssp CT-TC---SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEE--CCCSE---EEEEEETTEEEEEETT-
T ss_pred EC-CC---CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEec--CCCCc---eEEEEeCCEEEEEECC-
Confidence 11 11 1122344433 4678886543 3679999987643332211 11222 3455557888887532
Q ss_pred CCCCcceEEEEEcCcCeeEE
Q 010571 264 NNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 264 ~~~~~~d~~~~d~~~~~W~~ 283 (507)
.+.+.++|+.+.+-..
T Consensus 228 ----~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 228 ----TNSVIAMDLAISKEMD 243 (267)
T ss_dssp ----TTEEEEEETTTTEEEE
T ss_pred ----CCeEEEEeCCCCCceE
Confidence 2368899998776443
No 354
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=74.13 E-value=76 Score=31.84 Aligned_cols=98 Identities=9% Similarity=-0.051 Sum_probs=54.1
Q ss_pred EEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCce
Q 010571 221 LHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSV 300 (507)
Q Consensus 221 i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~ 300 (507)
+.+||+.++..+.+... +. ......-+++.+++++.+.. ....++++|+.+..+..+.... +...
T Consensus 134 ~~l~d~~~g~~~~l~~~---~~---~~~~~spDG~~la~~~~~~~-~~~~i~~~d~~~g~~~~l~~~~--------~~~~ 198 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---PG---FGFVSDIRGDLIAGLGFFGG-GRVSLFTSNLSSGGLRVFDSGE--------GSFS 198 (582)
T ss_dssp EEEEEEETTEEEEEEEE---SS---CEEEEEEETTEEEEEEEEET-TEEEEEEEETTTCCCEEECCSS--------CEEE
T ss_pred ceEEEccCCcEEEeecC---CC---ceEEECCCCCEEEEEEEcCC-CCeEEEEEcCCCCCceEeecCC--------Cccc
Confidence 44778888877665431 11 22233346666666553322 2246999999998888764321 1122
Q ss_pred EEEEEcCceEEEEEcccCCCcCCeEEEEECCCCCCC
Q 010571 301 CSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 336 (507)
Q Consensus 301 ~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~w~ 336 (507)
.....+++..|+ .+..++ ...++.+|+.+....
T Consensus 199 ~~~~SpDG~~l~-~~~~~~--~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 199 SASISPGMKVTA-GLETAR--EARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEECTTSCEEE-EEECSS--CEEEEEECTTTCCEE
T ss_pred cceECCCCCEEE-EccCCC--eeEEEEEcCCCCcEE
Confidence 233344445555 333222 357899998765443
No 355
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=73.87 E-value=59 Score=30.43 Aligned_cols=182 Identities=12% Similarity=0.112 Sum_probs=90.0
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCc
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH 196 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~ 196 (507)
.+.++|+.+........ .... -.+++.- ++++++.|+. +.+.+++..++........ ........
T Consensus 158 ~i~iwd~~~~~~~~~~~---~~~~--V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~--~~~~~~v~ 223 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE---TRGE--VKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTD--FDKNWSLS 223 (365)
T ss_dssp EEEEEETTTTEEEEEEE---CSSC--CCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECC--CCTTEEEE
T ss_pred EEEEeECCCCcEEEEeC---CCCc--eEEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeec--CCCCCCEE
Confidence 58899999886544321 1111 1222222 4555555542 2477788877766544321 11111112
Q ss_pred eEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEE
Q 010571 197 SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVL 274 (507)
Q Consensus 197 ~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~ 274 (507)
++....++..++.++.++.. ...++.+++........... ........-.++.+ ++++++.|+.++ .+.+|
T Consensus 224 ~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs~D~-----~V~iw 296 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLASNDN-----SIALV 296 (365)
T ss_dssp EEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEETTS-----CEEEE
T ss_pred EEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEcCCC-----EEEEE
Confidence 23334566677776654321 12356667665554432110 11111111233334 567888887553 37889
Q ss_pred EcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 275 NMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 275 d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
|..+..-.. .+. ..+......+.+..+..+++.|+.+ ..|-++++.
T Consensus 297 d~~~~~~~~--~~~-----~gH~~~V~~v~fSpdg~~laS~S~D----~tvrvw~ip 342 (365)
T 4h5i_A 297 KLKDLSMSK--IFK-----QAHSFAITEVTISPDSTYVASVSAA----NTIHIIKLP 342 (365)
T ss_dssp ETTTTEEEE--EET-----TSSSSCEEEEEECTTSCEEEEEETT----SEEEEEECC
T ss_pred ECCCCcEEE--Eec-----CcccCCEEEEEECCCCCEEEEEeCC----CeEEEEEcC
Confidence 988765321 110 0112234445555555677777765 456677763
No 356
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=73.82 E-value=43 Score=28.84 Aligned_cols=153 Identities=11% Similarity=0.047 Sum_probs=80.1
Q ss_pred eeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecC---CCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCc
Q 010571 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 95 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~---g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~ 169 (507)
+++..++.+|+|=|. .+|.++.....+...... ..+|.. .. ++... ++++|+|-|. .
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG~--------~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRGR--------K 89 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEETT--------E
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEccC--------E
Confidence 445579999999663 377777655444322211 123322 12 23333 5799998763 4
Q ss_pred EEEEEcCCCcE---EEeecCCCCCCC-CCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-----eee-cC
Q 010571 170 VHFLDLETMTW---DAVEVTQTPPAP-RYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEI-KG 238 (507)
Q Consensus 170 ~~~~d~~t~~W---~~~~~~g~~p~~-r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~-~~ 238 (507)
+++|+-.+..- ..+...| +|.. ..--++... .++++|+|-| +..|+||..+++-.. +.. -.
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~ 161 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFP 161 (207)
T ss_dssp EEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHST
T ss_pred EEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCC
Confidence 66665322110 1122112 2221 111223333 3478999988 679999987654221 000 01
Q ss_pred CCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeE
Q 010571 239 DLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 239 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~ 282 (507)
.+| ..-.++...++.+|+|-|. ..|.||..+.+-.
T Consensus 162 Gip--~~iDaAf~~~g~~YfFkg~-------~y~rf~~~~~~v~ 196 (207)
T 1pex_A 162 GIG--DKVDAVYEKNGYIYFFNGP-------IQFEYSIWSNRIV 196 (207)
T ss_dssp TSC--SCCSEEEEETTEEEEEETT-------EEEEEETTTTEEE
T ss_pred CCC--CCccEEEEcCCcEEEEECC-------EEEEEeCCccEEe
Confidence 122 2223555568899999663 5788988766543
No 357
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=73.68 E-value=15 Score=25.97 Aligned_cols=13 Identities=31% Similarity=0.608 Sum_probs=4.7
Q ss_pred hhhHHHHHHHHHH
Q 010571 447 CFKLEAQIAELQK 459 (507)
Q Consensus 447 ~~~~e~~~~e~~~ 459 (507)
+.+++++..++++
T Consensus 48 i~~l~~E~~~l~~ 60 (78)
T 3iv1_A 48 VTRLDQEVAEVDK 60 (78)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 358
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=73.50 E-value=4.5 Score=31.55 Aligned_cols=6 Identities=33% Similarity=0.368 Sum_probs=2.2
Q ss_pred hhhhHH
Q 010571 446 RCFKLE 451 (507)
Q Consensus 446 ~~~~~e 451 (507)
++..++
T Consensus 48 ~i~~Le 53 (120)
T 3i00_A 48 HVSELE 53 (120)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 359
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=73.23 E-value=56 Score=29.89 Aligned_cols=143 Identities=15% Similarity=0.103 Sum_probs=75.0
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CC-EEEEEcCcC-----------------CCC---CccCcEEE
Q 010571 116 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GS-RLIIFGGED-----------------RSR---KLLNDVHF 172 (507)
Q Consensus 116 ~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~-~l~~~GG~~-----------------~~~---~~~~~~~~ 172 (507)
...++++|+.++....+.. .+. .....+ ++ .|++..... +.+ .....++.
T Consensus 84 ~~~l~~~~~~~g~~~~l~~---~~~----~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILE---AKN----IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWI 156 (347)
T ss_dssp EEEEEEEETTTTEEEEEEE---ESE----EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEE
T ss_pred cceEEEEECCCCceEEEEc---CCC----ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEE
Confidence 4469999999988776652 221 222223 44 444443110 000 01356999
Q ss_pred EEcCCCcE-EEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCc---C-CCcEEEEECCCCcEEeeeecCCCCCCCcce
Q 010571 173 LDLETMTW-DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---F-FNDLHVLDLQTNEWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 173 ~d~~t~~W-~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~---~-~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~ 247 (507)
+|+.+++. ..+.. + .....+...++ +++.+...... . ...++.+| ++.+..+... ...
T Consensus 157 ~d~~~~~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-------~~~ 219 (347)
T 2gop_A 157 FDTESEEVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-------VSF 219 (347)
T ss_dssp EETTTTEEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-------ESE
T ss_pred EECCCCeEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-------cce
Confidence 99998887 55542 1 23344555667 55555433221 2 45788888 6777765321 112
Q ss_pred EEEEECCEEEEEeccCCC---CCcceEEEEEcCcCeeEEe
Q 010571 248 AGITIDENWYIVGGGDNN---NGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 248 ~~~~~~~~l~v~GG~~~~---~~~~d~~~~d~~~~~W~~~ 284 (507)
....-+++.+++.+.... .....++++| +..+..+
T Consensus 220 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 220 YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred eeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 222445554444442221 1235788998 5566654
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=73.23 E-value=64 Score=30.59 Aligned_cols=251 Identities=12% Similarity=0.010 Sum_probs=116.0
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCc--c-----ccc--eEEEE----CCEEEEEcCCCCCccCCceEEEECCCCceeEeee
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSP--R-----YKH--AAAVF----DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRL 70 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~--r-----~~~--~~~~~----~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~ 70 (507)
++|+.+.....|+.+......+.. + ..+ ++++. .+.||+.+. ...+++.+-...+|+.+..
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcC
Confidence 577877778899988642112211 1 111 23332 466776542 2357788777789998754
Q ss_pred ccccccCccccCCc-cCCCCCccceeeEEE---CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecC---CCCCCC--
Q 010571 71 ETELDADKTEDSGL-LEVLPPMSDHCMVKW---GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVA-- 141 (507)
Q Consensus 71 ~~~~~~~~~~~~~~-~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~---g~~p~~-- 141 (507)
.............. ...+.....++++.. .+.||+..+. .-+++.+-...+|+.+... ..+|.+
T Consensus 156 ~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~ 228 (394)
T 3b7f_A 156 FNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPNV 228 (394)
T ss_dssp HHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSSS
T ss_pred ccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCcc
Confidence 21000000000000 000111222344332 2567775431 2377777777899987521 112221
Q ss_pred ---cccceEEEEC---CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCC--CCCceEEEE--cCcEEEEEeC
Q 010571 142 ---RGGHSVTLVG---SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP--RYDHSAALH--ANRYLIVFGG 211 (507)
Q Consensus 142 ---r~~~~~~~~~---~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~--r~~~~~~~~--~~~~l~i~GG 211 (507)
...++++... +.||+.. ...+++.+-...+|+.+.. .+|.. ...++++.. ..+.||+...
T Consensus 229 ~~g~~~~~i~~~~~~~~~l~vg~--------~~gl~~s~D~G~tW~~~~~--~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 229 EFGHDPHCVVQHPAAPDILYQQN--------HCGIYRMDRREGVWKRIGD--AMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp SSCBCEEEEEECSSSTTEEEEEE--------TTEEEEEETTTTEEECGGG--GSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred ccCcceeEEEECCCCCCEEEEEc--------CCeEEEeCCCCCcceECCC--CCCCCCccceEEEEECCCCCCEEEEEec
Confidence 1122333322 4666632 1348888878889998863 23321 222333332 3455776531
Q ss_pred CCCC-------cCCCcEEEEECCCCcEEeeeecCCCCCCCc-----ceEEEEE--C-CEEEEEeccCCCCCcceEEEEEc
Q 010571 212 CSHS-------IFFNDLHVLDLQTNEWSQPEIKGDLVTGRA-----GHAGITI--D-ENWYIVGGGDNNNGCQETIVLNM 276 (507)
Q Consensus 212 ~~~~-------~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~-----~~~~~~~--~-~~l~v~GG~~~~~~~~d~~~~d~ 276 (507)
.... .....+++-.-...+|+.+.. .+|.... .+++++- + +.||+ |+.. ..+++-+-
T Consensus 299 ~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~--glp~~~~~~~~~~~~~~~~p~~~~~l~~-g~~~-----g~l~~S~D 370 (394)
T 3b7f_A 299 DGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR--GLPTDQAWLTVKRQAMTADAHAPVGVYF-GTTG-----GEIWASAD 370 (394)
T ss_dssp BCCSSTTCCBCCSSCCEEEESSTTSCCEEECB--TSCCSSCCCCCCTBSEEECCSSSCCEEE-ECTT-----SCEEEESS
T ss_pred cCCccceeecCCCceeEEEECCCCCCceECCC--CCCCccccceEEEEEEEECCCCCCEEEE-EeCC-----CeEEEECC
Confidence 1110 011223332222358998752 2333211 1222221 2 34554 4421 13555555
Q ss_pred CcCeeEEec
Q 010571 277 TKLAWSILT 285 (507)
Q Consensus 277 ~~~~W~~~~ 285 (507)
...+|+.+.
T Consensus 371 ~G~tW~~~~ 379 (394)
T 3b7f_A 371 EGEHWQCIA 379 (394)
T ss_dssp TTSBCEEEE
T ss_pred CCCCceEcc
Confidence 667899875
No 361
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=73.20 E-value=22 Score=26.70 Aligned_cols=24 Identities=17% Similarity=0.374 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 466 TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
.+..++..++.++..+..++..++
T Consensus 71 ~~~~klr~Yk~dL~~lk~elk~~~ 94 (102)
T 1vcs_A 71 MYSNRMRSYKQEMGKLETDFKRSR 94 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788888888888888876544
No 362
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=72.46 E-value=18 Score=30.29 Aligned_cols=14 Identities=21% Similarity=0.363 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHhHH
Q 010571 466 TIENEVQILRQQKS 479 (507)
Q Consensus 466 ~~e~e~~~~~~~~~ 479 (507)
++.+|+.+++.++.
T Consensus 117 aL~~Ei~~Lr~qL~ 130 (175)
T 3lay_A 117 AVAKEMESLGQKLD 130 (175)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444443
No 363
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=72.42 E-value=5 Score=38.92 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=11.7
Q ss_pred HhhHhhhhhhhhhHHHHHHHHHHHHHhHH
Q 010571 437 QGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 437 ~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
+++..++++.+.+++.+++++++++.+.+
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 44 (403)
T 4etp_A 16 KEKIAALKEKIKDTELGMKELNEILIKEE 44 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444444444444333
No 364
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=71.91 E-value=10 Score=30.69 Aligned_cols=36 Identities=11% Similarity=0.023 Sum_probs=16.2
Q ss_pred HHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHH
Q 010571 436 VQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEV 471 (507)
Q Consensus 436 ~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~ 471 (507)
++.+.+..++++++..++++|+..|.-..+.|-+..
T Consensus 10 Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafknLv~RN 45 (155)
T 2aze_A 10 LEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 45 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444555555544444444444333
No 365
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=71.63 E-value=59 Score=29.44 Aligned_cols=176 Identities=10% Similarity=0.109 Sum_probs=83.9
Q ss_pred EECCEEEEEcCCCCCccCCceEEEECC-CCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEcccCCC
Q 010571 35 VFDQKLYIVGGSRNGRFLSDVQVFDLR-SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKK 112 (507)
Q Consensus 35 ~~~~~lyv~GG~~~~~~~~~~~~~d~~-t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 112 (507)
+.++.||+-.. ...++.||+. ...|...... . ...+.+.. ++.||+...
T Consensus 105 ~~~~~l~v~t~------~~~l~~~d~~g~~~~~~~~~~------------------~-~~~~~~~~~~g~l~vgt~---- 155 (330)
T 3hxj_A 105 IFEDILYVTSM------DGHLYAINTDGTEKWRFKTKK------------------A-IYATPIVSEDGTIYVGSN---- 155 (330)
T ss_dssp EETTEEEEECT------TSEEEEECTTSCEEEEEECSS------------------C-CCSCCEECTTSCEEEECT----
T ss_pred EECCEEEEEec------CCEEEEEcCCCCEEEEEcCCC------------------c-eeeeeEEcCCCEEEEEcC----
Confidence 34777776432 2458889987 2245432211 1 12223333 567776321
Q ss_pred CCCcceEEEEECCCCc--EEEeecCCCCCCCcccceEEE-ECCEEEEEcCcCCCCCccCcEEEEEcCC-CcEEEeecCCC
Q 010571 113 SSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLET-MTWDAVEVTQT 188 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~--W~~~~~~g~~p~~r~~~~~~~-~~~~l~~~GG~~~~~~~~~~~~~~d~~t-~~W~~~~~~g~ 188 (507)
...++.||+. +. |.... +... ..+.+. -++.||+.. ..+++||... ..|.....
T Consensus 156 ---~~~l~~~d~~-g~~~~~~~~-----~~~~-~~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~--- 213 (330)
T 3hxj_A 156 ---DNYLYAINPD-GTEKWRFKT-----NDAI-TSAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAG--- 213 (330)
T ss_dssp ---TSEEEEECTT-SCEEEEEEC-----SSCC-CSCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCS---
T ss_pred ---CCEEEEECCC-CCEeEEEec-----CCCc-eeeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccC---
Confidence 2358899988 43 54432 1111 122233 245666543 3588999432 23554321
Q ss_pred CCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc-EEeeeecCCCCCCCcceEEEEE-CCEEEEEeccCCCC
Q 010571 189 PPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNN 266 (507)
Q Consensus 189 ~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~ 266 (507)
.....+++...++.||+... + ..+++||..... |... ... .... +.+.. ++.||+. ..+
T Consensus 214 ---~~~~~~~~~~~~g~l~v~t~-~-----~gl~~~~~~g~~~~~~~-~~~----~~~~-~~~~~~~g~l~v~-t~~--- 274 (330)
T 3hxj_A 214 ---YWTVTRPAISEDGTIYVTSL-D-----GHLYAINPDGTEKWRFK-TGK----RIES-SPVIGNTDTIYFG-SYD--- 274 (330)
T ss_dssp ---SCCCSCCEECTTSCEEEEET-T-----TEEEEECTTSCEEEEEE-CSS----CCCS-CCEECTTSCEEEE-CTT---
T ss_pred ---CcceeceEECCCCeEEEEcC-C-----CeEEEECCCCCEeEEee-CCC----Cccc-cceEcCCCeEEEe-cCC---
Confidence 11123344445556776432 1 357888765443 5432 111 1111 22333 4667654 211
Q ss_pred CcceEEEEEcCcC-eeE
Q 010571 267 GCQETIVLNMTKL-AWS 282 (507)
Q Consensus 267 ~~~d~~~~d~~~~-~W~ 282 (507)
..+++||++.. .|.
T Consensus 275 --ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 275 --GHLYAINPDGTEKWN 289 (330)
T ss_dssp --CEEEEECTTSCEEEE
T ss_pred --CCEEEECCCCcEEEE
Confidence 14788887433 354
No 366
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=71.48 E-value=39 Score=27.31 Aligned_cols=46 Identities=20% Similarity=0.318 Sum_probs=28.4
Q ss_pred HHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH
Q 010571 420 DEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 420 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
+...+...+..+.+..+...++...++....+..+.+++.+++...
T Consensus 69 eeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~ 114 (147)
T 2b9c_A 69 EDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVT 114 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445555666666666666666666777777777776665
No 367
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=71.40 E-value=5.9 Score=22.93 Aligned_cols=24 Identities=13% Similarity=0.296 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHh
Q 010571 465 QTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 465 ~~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
.+|+.+.+++..++..|+.+...+
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RL 27 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARL 27 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345555555555555555555443
No 368
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=71.09 E-value=6.3 Score=22.41 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010571 466 TIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
+||.+.+++..++..++.|...++..
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~L 29 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46666777777777777776655543
No 369
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=70.72 E-value=27 Score=25.15 Aligned_cols=11 Identities=18% Similarity=0.468 Sum_probs=5.0
Q ss_pred HHHHHHHHHHH
Q 010571 466 TIENEVQILRQ 476 (507)
Q Consensus 466 ~~e~e~~~~~~ 476 (507)
.|+.|+..+++
T Consensus 65 ~Ld~EIatYRk 75 (84)
T 1gk4_A 65 ALDIEIATYRK 75 (84)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 34444444444
No 370
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=70.63 E-value=29 Score=28.30 Aligned_cols=12 Identities=8% Similarity=0.069 Sum_probs=4.4
Q ss_pred HHhhHhhhhhhh
Q 010571 436 VQGQLVAERSRC 447 (507)
Q Consensus 436 ~~~~~~~~~~~~ 447 (507)
+...++.++++.
T Consensus 62 Le~~n~~L~~~l 73 (155)
T 2oto_A 62 LEDQRKDLETKL 73 (155)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 371
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=70.62 E-value=84 Score=30.80 Aligned_cols=217 Identities=12% Similarity=-0.026 Sum_probs=97.0
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCC----cEEEeecCCCC--CCCc-ccceE-EEECCEEEEEcCcCCCCCccCcEE
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETN----LCGVMETSGKV--PVAR-GGHSV-TLVGSRLIIFGGEDRSRKLLNDVH 171 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~----~W~~~~~~g~~--p~~r-~~~~~-~~~~~~l~~~GG~~~~~~~~~~~~ 171 (507)
.++||+-|..+ +.+++||+.++ +-.+..-...+ +.+. .-|.. +.-++ |||-.-.+..+...+.+.
T Consensus 95 r~~l~v~~l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 95 RRFLIVPGLRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp SCEEEEEBTTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred CCEEEEccCCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 45677766543 45999998766 22221100000 0011 11222 22244 666322222233457899
Q ss_pred EEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEe----------CCCCC----cCCCcEEEEECCCCcEEe-eee
Q 010571 172 FLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG----------GCSHS----IFFNDLHVLDLQTNEWSQ-PEI 236 (507)
Q Consensus 172 ~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~G----------G~~~~----~~~~~i~~~d~~~~~W~~-~~~ 236 (507)
.+|..|.+-..--..+..|.. ..+.+-...++.+++.. |.... ...+.|++||+.+.+-.. +..
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~-~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQY-LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCC-CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEECCCCeEEEEEccCCCCcc-ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 999998765443322222222 22222222333244333 22111 345789999998864332 111
Q ss_pred cCC-CCCCCcceEEEEE---CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccC--CC-----CCC-CCC-----CCCc
Q 010571 237 KGD-LVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV--KG-----RNP-LAS-----EGLS 299 (507)
Q Consensus 237 ~~~-~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~--~~-----~~p-~~~-----~~~~ 299 (507)
+. -..|| |...++ +..+||..-.+.....+.+++|..+...|..+..+ +. ..| .+. ....
T Consensus 247 -g~~g~~P~--~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 247 -GEENRMAL--ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp -CTTEEEEE--EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred -CCCCCccc--eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 10 00111 111222 23466655422222334566555555777654321 11 001 000 1223
Q ss_pred eEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 300 VCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 300 ~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
....+..++.+|||.-- ..+.|.+||+.
T Consensus 324 a~I~lS~DGrfLYVSnr----g~d~VavfdV~ 351 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLW----GIGEVRQYDIS 351 (462)
T ss_dssp CCEEECTTSCEEEEEET----TTTEEEEEECS
T ss_pred eEEEECCCCCEEEEEeC----CCCEEEEEEec
Confidence 33445556678887422 24688999975
No 372
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=70.36 E-value=51 Score=32.17 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~ 485 (507)
+.++++.+++.++..-++++
T Consensus 77 kY~~~~AeY~~kl~aYe~~~ 96 (497)
T 3iox_A 77 KYQKDLADYPVKLKAYEDEQ 96 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444443
No 373
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=69.62 E-value=7.1 Score=22.13 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhc
Q 010571 466 TIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
+||.+.+++.++++.++.|...++.
T Consensus 4 QLEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 4 XIEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4666667777777777777665443
No 374
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=69.53 E-value=33 Score=25.73 Aligned_cols=20 Identities=10% Similarity=0.302 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~ 485 (507)
.+..++..++.+++.+..++
T Consensus 82 ~~~~klr~Yk~dL~~lk~el 101 (102)
T 2qyw_A 82 PMMSKLRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 55667777777777766654
No 375
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=69.44 E-value=19 Score=23.09 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~~ 487 (507)
+|...+.+.++++..+.+++++
T Consensus 27 rL~~~L~~AR~el~~Lkeele~ 48 (51)
T 3m91_A 27 KLMETLKEARQQLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555553
No 376
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=69.15 E-value=67 Score=29.11 Aligned_cols=188 Identities=10% Similarity=0.017 Sum_probs=90.6
Q ss_pred ceEEEE-CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEcc
Q 010571 31 HAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGG 108 (507)
Q Consensus 31 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG 108 (507)
+++++. ++.||+.....+ ...++.||+.+++...+...+. .+.....+.. ++.+|+.--
T Consensus 75 ~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~~~----------------~~~~~g~~~~~~~~~~v~d~ 135 (306)
T 2p4o_A 75 SGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTLPD----------------AIFLNGITPLSDTQYLTADS 135 (306)
T ss_dssp EEEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEECTT----------------CSCEEEEEESSSSEEEEEET
T ss_pred eeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeCCC----------------ccccCcccccCCCcEEEEEC
Confidence 344443 456877653211 1248889998888766544321 2333333332 556776531
Q ss_pred cCCCCCCcceEEEEECCCCcEEEe--ecCCC--CCCC--cccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCC-CcEE
Q 010571 109 HYKKSSDSMIVRFIDLETNLCGVM--ETSGK--VPVA--RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET-MTWD 181 (507)
Q Consensus 109 ~~~~~~~~~~~~~~d~~t~~W~~~--~~~g~--~p~~--r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t-~~W~ 181 (507)
....++++|+.++.-+.. ..... .+.. .....+..-++.||+.-- ..+.+++|++.. ++..
T Consensus 136 ------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~------~~~~I~~~~~~~~g~~~ 203 (306)
T 2p4o_A 136 ------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT------EKMLLLRIPVDSTDKPG 203 (306)
T ss_dssp ------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET------TTTEEEEEEBCTTSCBC
T ss_pred ------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC------CCCEEEEEEeCCCCCCC
Confidence 133699999886532221 10000 1111 111122333557887642 245799999864 2221
Q ss_pred EeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEEC------CE
Q 010571 182 AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITID------EN 255 (507)
Q Consensus 182 ~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~------~~ 255 (507)
......... .-..+++-.++.+|+.-.. .+.|.+||+. +....+. ..+.+.....++.++ +.
T Consensus 204 ~~~~~~~~~---~P~gi~vd~dG~l~va~~~-----~~~V~~~~~~-G~~~~~~---~~~~~~~~p~~~a~~g~~~d~~~ 271 (306)
T 2p4o_A 204 EPEIFVEQT---NIDDFAFDVEGNLYGATHI-----YNSVVRIAPD-RSTTIIA---QAEQGVIGSTAVAFGQTEGDCTA 271 (306)
T ss_dssp CCEEEEESC---CCSSEEEBTTCCEEEECBT-----TCCEEEECTT-CCEEEEE---CGGGTCTTEEEEEECCSTTTTTE
T ss_pred ccEEEeccC---CCCCeEECCCCCEEEEeCC-----CCeEEEECCC-CCEEEEe---ecccccCCceEEEEecccCCCCE
Confidence 111000111 1134555556678876532 2579999986 4443321 112222233445543 46
Q ss_pred EEEEec
Q 010571 256 WYIVGG 261 (507)
Q Consensus 256 l~v~GG 261 (507)
|||...
T Consensus 272 LyVt~~ 277 (306)
T 2p4o_A 272 IYVVTN 277 (306)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 777654
No 377
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=69.12 E-value=12 Score=26.01 Aligned_cols=20 Identities=30% Similarity=0.361 Sum_probs=12.2
Q ss_pred HHHHHHHHHHhHHHHHHHHH
Q 010571 467 IENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 467 ~e~e~~~~~~~~~~~~~~~~ 486 (507)
+..|.+.|+.++..+..+++
T Consensus 48 l~~en~~Lr~~i~~L~~El~ 67 (70)
T 1gd2_E 48 TTLENDQLRQKVRQLEEELR 67 (70)
T ss_dssp HHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666654
No 378
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=68.75 E-value=6.1 Score=22.56 Aligned_cols=25 Identities=12% Similarity=0.252 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 465 QTIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 465 ~~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
.+|+.+.+++..++..++.+...++
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~ 28 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLA 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4566667777777777777765443
No 379
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=68.66 E-value=24 Score=24.86 Aligned_cols=13 Identities=15% Similarity=0.376 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHhH
Q 010571 466 TIENEVQILRQQK 478 (507)
Q Consensus 466 ~~e~e~~~~~~~~ 478 (507)
.++.++.++++++
T Consensus 56 ~lq~Ki~elkrql 68 (78)
T 2ic6_A 56 ALETKLGELKREL 68 (78)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444333
No 380
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=68.57 E-value=5.5 Score=23.06 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 010571 466 TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~ 486 (507)
+|+.+.+++..++..|+.|..
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~ 25 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVA 25 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHH
Confidence 344444444555554544443
No 381
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=68.39 E-value=13 Score=27.18 Aligned_cols=12 Identities=17% Similarity=0.390 Sum_probs=4.6
Q ss_pred HHHHHHHHHHhH
Q 010571 467 IENEVQILRQQK 478 (507)
Q Consensus 467 ~e~e~~~~~~~~ 478 (507)
++.++.++++++
T Consensus 57 lq~Ki~elkr~l 68 (96)
T 2ic9_A 57 LETKLGELKREL 68 (96)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 382
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=68.10 E-value=86 Score=29.99 Aligned_cols=149 Identities=19% Similarity=0.188 Sum_probs=0.0
Q ss_pred ccceEEEE-CCEEEEEc----CCCCCccCCceEEEECCC----CceeEeeeccccccCccccCCccCCCCCccceeeEEE
Q 010571 29 YKHAAAVF-DQKLYIVG----GSRNGRFLSDVQVFDLRS----LAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW 99 (507)
Q Consensus 29 ~~~~~~~~-~~~lyv~G----G~~~~~~~~~~~~~d~~t----~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~ 99 (507)
..|++++. ++.||.|| |..+.....+...-.... .....+.. ...+..+...
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~-------------------G~~ht~~l~~ 242 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC-------------------GWRHTISVSY 242 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE-------------------CSSEEEEEET
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE-------------------CCCcEEEEcC
Q ss_pred CCEEEEEc-------ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECC-EEEEEc-------CcCCCC
Q 010571 100 GTKLLILG-------GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGS-RLIIFG-------GEDRSR 164 (507)
Q Consensus 100 ~~~iyv~G-------G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~l~~~G-------G~~~~~ 164 (507)
++.+|.|| |.........-..+-.+.......+. .-..|+++...+ .+|.+| |.....
T Consensus 243 ~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~-------~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~ 315 (406)
T 4d9s_A 243 SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQIS-------GGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315 (406)
T ss_dssp TCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEE-------ECSSEEEEEETTSCEEEEECCTTSTTCSSSSS
T ss_pred CCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEE-------ecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCC
Q ss_pred CccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEe
Q 010571 165 KLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 165 ~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~G 210 (507)
....-..+--+.......+. .-..|+++...++.+|.+|
T Consensus 316 ~~~~p~~v~~~~~~~v~~va-------~G~~hs~alt~~G~v~~wG 354 (406)
T 4d9s_A 316 DQCSPVQVRFPDDQKVVQVS-------CGWRHTLAVTERNNVFAWG 354 (406)
T ss_dssp CEEEEEEECCGGGCCEEEEE-------ECSSEEEEEETTSCEEEEE
T ss_pred CCccCEEEeccCCCcEEEEE-------eCCCeEEEEeCCCCEEEec
No 383
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=67.46 E-value=86 Score=29.73 Aligned_cols=215 Identities=9% Similarity=-0.016 Sum_probs=111.1
Q ss_pred CCeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
+.+.+|+.......+.. ....-.+++.. ++.||+.-- ....++++++.......+.....
T Consensus 97 ~I~~i~~~~~~~~~~~~-----~~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~-------- 158 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN-----NLENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGL-------- 158 (386)
T ss_dssp CEEEECTTSCCCEEEEC-----SCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSC--------
T ss_pred cceeeccCCCcEEEEec-----CCCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCC--------
Confidence 34555555555544431 11222344433 577887743 23568899988766554432211
Q ss_pred CCccCCCCCccceeeEE--ECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEE
Q 010571 82 SGLLEVLPPMSDHCMVK--WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~ 157 (507)
. .-..+++ .++.||+.-.. ...++++++....-..+.. ..+..| ..+++- ++.||+.
T Consensus 159 --------~-~p~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~-~~l~~P---~giavdp~~g~ly~t 219 (386)
T 3v65_B 159 --------E-SPGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLW-QSLEKP---RAIALHPMEGTIYWT 219 (386)
T ss_dssp --------S-CCCCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEEC-SSCSCE---EEEEEETTTTEEEEE
T ss_pred --------C-CccEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeec-CCCCCC---cEEEEEcCCCeEEEe
Confidence 0 1122333 37899987532 3358888887654333331 122222 123333 5688876
Q ss_pred cCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeee
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
--.. ...|+++++....-..+...+ +..| .++++- .++.||+.-.. .+.|+++|+....-..+..
T Consensus 220 d~~~-----~~~I~r~~~dG~~~~~~~~~~-~~~P---nGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~ 285 (386)
T 3v65_B 220 DWGN-----TPRIEASSMDGSGRRIIADTH-LFWP---NGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVIS 285 (386)
T ss_dssp ECSS-----SCEEEEEETTSCSCEEEECSS-CSCE---EEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEEC
T ss_pred ccCC-----CCEEEEEeCCCCCcEEEEECC-CCCe---eeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEE
Confidence 3211 357999998765444443211 1111 233433 46778887532 3679999987543332211
Q ss_pred cCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCc
Q 010571 237 KGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~ 278 (507)
...+ .-.++++.++.+|+..-. ...+..+|..+
T Consensus 286 -~~~~---~P~giav~~~~ly~td~~-----~~~V~~~~~~~ 318 (386)
T 3v65_B 286 -QGLP---HPFAITVFEDSLYWTDWH-----TKSINSANKFT 318 (386)
T ss_dssp -SSCS---SEEEEEEETTEEEEEETT-----TTEEEEEETTT
T ss_pred -CCCC---CceEEEEECCEEEEeeCC-----CCeEEEEECCC
Confidence 1222 224566678888887532 23577777433
No 384
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=67.45 E-value=36 Score=25.66 Aligned_cols=17 Identities=12% Similarity=0.192 Sum_probs=8.5
Q ss_pred HHhhHHHHHHHHHhhHH
Q 010571 391 IDAIKEDKRVLELSLTE 407 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~ 407 (507)
++.|+++....+..|..
T Consensus 24 ieeLq~Ei~~~E~QL~~ 40 (113)
T 4fi5_A 24 MEELQREINAHEGQLVI 40 (113)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555555444433
No 385
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=67.23 E-value=32 Score=27.80 Aligned_cols=23 Identities=17% Similarity=0.250 Sum_probs=10.9
Q ss_pred hHHHHHHhhccchhhHHhHHHHH
Q 010571 415 FREKIDEVNSTHSELSKELSSVQ 437 (507)
Q Consensus 415 l~~~~~~~~~~~~~~~~e~~~~~ 437 (507)
+...+..++.+++.++.+.+...
T Consensus 34 l~~~i~q~d~elqQLefq~kr~~ 56 (150)
T 4dci_A 34 ISNGIANADQQLAQLEQEGQTVV 56 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555544444433
No 386
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=67.19 E-value=8.5 Score=21.81 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 465 QTIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 465 ~~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
.+||.+.+++..++..++.|...++
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~ 27 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNT 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3466666777777777777765443
No 387
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=67.17 E-value=31 Score=29.90 Aligned_cols=11 Identities=9% Similarity=0.262 Sum_probs=3.9
Q ss_pred HHHhhccchhh
Q 010571 419 IDEVNSTHSEL 429 (507)
Q Consensus 419 ~~~~~~~~~~~ 429 (507)
+..+..+++.+
T Consensus 141 ~~~L~~e~~~l 151 (213)
T 1ik9_A 141 NEHLQKENERL 151 (213)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 388
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=67.04 E-value=63 Score=28.02 Aligned_cols=157 Identities=12% Similarity=0.019 Sum_probs=0.0
Q ss_pred eEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEE-ECCEEEEEcccC
Q 010571 32 AAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHY 110 (507)
Q Consensus 32 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 110 (507)
++..+.+.+|+|=| +.+|+++.....-......... ....+.....+... .++++|+|-|..
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~----------wp~lp~~IDAA~~~~~~~k~yfFkG~~ 97 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF----------WPELPEKIDAVYEAPQEEKAVFFAGNE 97 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGT----------CTTSCSCCSEEEEETTTTEEEEEETTE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHh----------cCCCCCCccEEEEECCCCEEEEEeCCE
Q ss_pred CCCCCcceEEEEECCCCcE---EEeecCCCCCCCcccceEEE--ECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEe--
Q 010571 111 KKSSDSMIVRFIDLETNLC---GVMETSGKVPVARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAV-- 183 (507)
Q Consensus 111 ~~~~~~~~~~~~d~~t~~W---~~~~~~g~~p~~r~~~~~~~--~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~-- 183 (507)
+|+|+..+..- +.+..-|-......-.++.. .++++|+|-|. ..+.||..+.+-...
T Consensus 98 --------yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~--------~ywr~d~~~~~v~~gyP 161 (218)
T 1gen_A 98 --------YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD--------KFWRYNEVKKKMDPGFP 161 (218)
T ss_dssp --------EEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT--------EEEEEETTTTEECSSCC
T ss_pred --------EEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC--------EEEEEECccccccCCCC
Q ss_pred -ecC-CCCCCCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCC
Q 010571 184 -EVT-QTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 184 -~~~-g~~p~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~ 228 (507)
.+. .-+..+..-.++.... ++.+|+|-| +..|.||..+
T Consensus 162 r~i~~~w~g~p~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~ 202 (218)
T 1gen_A 162 KLIADAWNAIPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQS 202 (218)
T ss_dssp EEHHHHSSSCCSSCSEEEECTTTCEEEEEET-------TEEEEEETTE
T ss_pred cchhhccCCCCCCCCEEEEEcCCCcEEEEEC-------CEEEEEECCc
No 389
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=66.90 E-value=31 Score=24.37 Aligned_cols=18 Identities=33% Similarity=0.401 Sum_probs=9.7
Q ss_pred HHHHHHHHhHHHHHHHHH
Q 010571 469 NEVQILRQQKSAFEQEME 486 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~~ 486 (507)
.|+..+++++...+.+++
T Consensus 54 ~El~~Lq~qLe~kd~ei~ 71 (81)
T 3qh9_A 54 AEVAQLQEQVALKDAEIE 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHH
Confidence 355555555555555544
No 390
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=66.82 E-value=67 Score=28.25 Aligned_cols=156 Identities=11% Similarity=0.026 Sum_probs=82.7
Q ss_pred ceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEE
Q 010571 31 HAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLIL 106 (507)
Q Consensus 31 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~ 106 (507)
+++++. ++.||+.-.. .+.+.++++....-..+.... ..+- ..++.. +++||+.
T Consensus 82 ~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~----------------~~~P-~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTG----------------LVNP-RGIVTDPVRGNLYWT 139 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS----------------CSSE-EEEEEETTTTEEEEE
T ss_pred cEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECC----------------CCCc-cEEEEeeCCCEEEEE
Confidence 445554 5788887542 356888988654322222111 0111 233333 6889987
Q ss_pred cccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEee
Q 010571 107 GGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 184 (507)
Q Consensus 107 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~ 184 (507)
.... ....++++++....-..+.. ... ..-..++.- ++.||+.-.. .+.|.+||+.+..-..+.
T Consensus 140 ~~~~----~~~~I~~~~~dg~~~~~~~~---~~~-~~P~gia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 140 DWNR----DNPKIETSHMDGTNRRILAQ---DNL-GLPNGLTFDAFSSQLCWVDAG------THRAECLNPAQPGRRKVL 205 (267)
T ss_dssp ECCS----SSCEEEEEETTSCCCEEEEC---TTC-SCEEEEEEETTTTEEEEEETT------TTEEEEEETTEEEEEEEE
T ss_pred ECCC----CCcEEEEEecCCCCcEEEEE---CCC-CCCcEEEEcCCCCEEEEEECC------CCEEEEEecCCCceEEEe
Confidence 5321 13468888886544333321 111 111223332 4688886432 457999999764333332
Q ss_pred cCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe
Q 010571 185 VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 185 ~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
.. ...| ++++. .++.+|+..... +.+.++|+.++....
T Consensus 206 ~~--~~~P---~gi~~-d~~~lyva~~~~-----~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 206 EG--LQYP---FAVTS-YGKNLYYTDWKT-----NSVIAMDLAISKEMD 243 (267)
T ss_dssp EC--CCSE---EEEEE-ETTEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred cC--CCCc---eEEEE-eCCEEEEEECCC-----CeEEEEeCCCCCceE
Confidence 21 1112 24444 467788865432 579999998876544
No 391
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=66.82 E-value=92 Score=29.82 Aligned_cols=201 Identities=10% Similarity=0.012 Sum_probs=104.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.||+.... ...+.+||+.++.-..+.... ...+ ++.. ++.||+......
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~------------------~~~~-ia~~~~g~~l~~~d~~~~--- 193 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF------------------KGGK-PAVTKDKQRVYSIGWEGT--- 193 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETC------------------CBCB-CEECTTSSEEEEEBSSTT---
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccC------------------CCCc-eeEecCCCcEEEEecCCC---
Confidence 6788888652 356899999988776655432 1122 2222 456666643221
Q ss_pred CcceEEEEECCCCcE-EEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC
Q 010571 115 DSMIVRFIDLETNLC-GVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~ 191 (507)
..++.|++.++.- ..+.... .+....-+.+++. ++.||+... ...+++||+.+.....+...+....
T Consensus 194 --~~I~~~d~~~~~~~~~~g~~~-~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 194 --HTVYVYMKASGWAPTRIGQLG-STFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp --CEEEEEEGGGTTCEEEEEECC-TTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSC
T ss_pred --ceEEEEEcCCCceeEEeeecc-chhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCC
Confidence 1589999876532 2331100 1011112233333 568888321 2369999998887655532211111
Q ss_pred CCCC-c-eEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCC--------C-CcceEEEEE--CCEEE
Q 010571 192 PRYD-H-SAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT--------G-RAGHAGITI--DENWY 257 (507)
Q Consensus 192 ~r~~-~-~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~--------~-r~~~~~~~~--~~~l~ 257 (507)
.... + .++... ++.||+.... .+.|++|++... ...+...+..+. . -.....+.+ ++.||
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~-----~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly 337 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQN-----LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY 337 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETT-----TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE
T ss_pred CCCCccccEEEeCCCCEEEEEeCC-----CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE
Confidence 1222 2 555555 5778887543 257899987654 222211110000 0 112333444 45788
Q ss_pred EEec-cCCCCCcceEEEEEcCcCeeEEec
Q 010571 258 IVGG-GDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 258 v~GG-~~~~~~~~d~~~~d~~~~~W~~~~ 285 (507)
+... . ...+.++++.+.....+.
T Consensus 338 vad~~~-----~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 338 IVDGFK-----GYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EEETTT-----TCEEEEEETTTTEEEEEE
T ss_pred EEeCCC-----CCEEEEEECCCCEEEEEe
Confidence 8743 2 235788997666665543
No 392
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=66.76 E-value=7 Score=22.36 Aligned_cols=26 Identities=15% Similarity=0.293 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010571 465 QTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 465 ~~~e~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
.+||.+.+++..++..++.|+..++.
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 35666677777777777777665443
No 393
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=66.46 E-value=85 Score=29.32 Aligned_cols=64 Identities=13% Similarity=0.116 Sum_probs=36.4
Q ss_pred CcEEEEEeCCC-----CCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCcceEEEEE
Q 010571 203 NRYLIVFGGCS-----HSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DE-NWYIVGGGDNNNGCQETIVLN 275 (507)
Q Consensus 203 ~~~l~i~GG~~-----~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~d~~~~d 275 (507)
++++|+....+ .....+.++++|+.+.+-..- ++.+. .++++.- ++ .||+.++ +.+.+||
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~-----i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D 331 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVAR-----IPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYD 331 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEE-----EECTT-CCEEEEETTTTEEEEECS-------SCEEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEE-----EecCC-eeEEEECCCCCEEEEeCC-------CeEEEEE
Confidence 47788875411 112346899999998764331 12222 3333333 33 4555432 5788999
Q ss_pred cCcC
Q 010571 276 MTKL 279 (507)
Q Consensus 276 ~~~~ 279 (507)
..+.
T Consensus 332 ~~t~ 335 (361)
T 2oiz_A 332 ISQP 335 (361)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 8887
No 394
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=66.10 E-value=7.1 Score=34.50 Aligned_cols=21 Identities=29% Similarity=0.414 Sum_probs=11.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHH
Q 010571 467 IENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 467 ~e~e~~~~~~~~~~~~~~~~~ 487 (507)
|..++.++++++..+.+|++.
T Consensus 73 L~~~Lk~ar~El~~LkeEler 93 (251)
T 3m9b_A 73 LMETLKEARQQLLALREEVDR 93 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555566666554
No 395
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=65.60 E-value=42 Score=25.46 Aligned_cols=17 Identities=35% Similarity=0.513 Sum_probs=6.7
Q ss_pred HHHHHHHHhHHHHHHHH
Q 010571 469 NEVQILRQQKSAFEQEM 485 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~ 485 (507)
+++..+..++..++.++
T Consensus 78 ~~i~~l~~~i~~l~~~~ 94 (112)
T 1l8d_A 78 NTLAKLIDRKSELEREL 94 (112)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444333333
No 396
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=65.53 E-value=52 Score=26.50 Aligned_cols=55 Identities=7% Similarity=0.016 Sum_probs=29.6
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
....|+.++..++..+..++.++++....++.++....-++.++..++++++.++
T Consensus 69 ~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq 123 (152)
T 3a7p_A 69 TLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLK 123 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555556655555555555555555555555555555555444444444443
No 397
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=65.08 E-value=15 Score=26.70 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccccc
Q 010571 466 TIENEVQILRQQKSAFEQEMERATSVQTQ 494 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~~~~~~~~~ 494 (507)
+|++|-.+|+.++++|+.|+..++..-.|
T Consensus 47 ~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~ 75 (87)
T 1hjb_A 47 ELTAENERLQKKVEQLSRELSTLRNLFKQ 75 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444333333
No 398
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=65.07 E-value=76 Score=30.14 Aligned_cols=51 Identities=10% Similarity=0.171 Sum_probs=22.8
Q ss_pred HHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHH
Q 010571 433 LSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQ 483 (507)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~ 483 (507)
++.+....+.++.++.++.+..+++++.++... ++++++.-+.-++-+|.+
T Consensus 200 ~~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lkp~l~ql~k 254 (373)
T 3hhm_B 200 IQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRK 254 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHH
Confidence 333444444455555555544444444444332 445544444333333333
No 399
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=64.93 E-value=38 Score=24.79 Aligned_cols=25 Identities=24% Similarity=0.274 Sum_probs=17.0
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHH
Q 010571 462 ESSQTIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 462 ~~~~~~e~e~~~~~~~~~~~~~~~~ 486 (507)
.+.++|+.|+++|..+.+.|.++.+
T Consensus 65 ~~v~eLe~everL~~ENq~L~~e~~ 89 (104)
T 3s9g_A 65 ARVRELELELDRLRAENLQLLTENE 89 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455677777777777777766654
No 400
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=63.53 E-value=11 Score=21.56 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhc
Q 010571 466 TIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
+||.+.+++..++..++.|+..++.
T Consensus 5 QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 5 QIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4666667777777777777655543
No 401
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=63.52 E-value=96 Score=28.90 Aligned_cols=145 Identities=12% Similarity=0.003 Sum_probs=72.1
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEE-E--CCEEEEEcCcCCCCCccCcEEEEEcC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-V--GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~-~--~~~l~~~GG~~~~~~~~~~~~~~d~~ 176 (507)
++++||.+.... ..|+++++....=.......+.+..+.+...++ . ++.|++..+ . ..++.||+.
T Consensus 147 ~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~------g~L~~fD~~ 214 (334)
T 2p9w_A 147 DGNSYVAFALGM-----PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P------RALTAFDVS 214 (334)
T ss_dssp TSCEEEEEEESS-----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S------SSEEEEECS
T ss_pred CCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C------CeEEEEcCC
Confidence 689999765321 359999988653222111112233455554444 4 346666654 2 359999987
Q ss_pred CCcEEEeecC--CCCCCCCCCceE-EEEcCcEE-EEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCC---CcceEE
Q 010571 177 TMTWDAVEVT--QTPPAPRYDHSA-ALHANRYL-IVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTG---RAGHAG 249 (507)
Q Consensus 177 t~~W~~~~~~--g~~p~~r~~~~~-~~~~~~~l-~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~---r~~~~~ 249 (507)
+.....++.. |........-.+ ..-.++.+ +|..+. +..+.+-...+ |+.....+..|.+ +...+.
T Consensus 215 ~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~------~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~ 287 (334)
T 2p9w_A 215 KPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA------PYAISFRSWDN-WKSANIKKTKRSELQNSGFTAV 287 (334)
T ss_dssp SSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET------TEEEEEECSST-TSEEEEEEEECGGGGSSCEEEE
T ss_pred CCcceeecccccCCcccccCcccccccccCCEEEEEEcCC------CCEEEEECCCC-cceeEEeeeecCccccCceeEE
Confidence 5332122221 211000111111 12124445 444332 34555554444 9887665555543 333344
Q ss_pred EE----ECCEEEEEeccC
Q 010571 250 IT----IDENWYIVGGGD 263 (507)
Q Consensus 250 ~~----~~~~l~v~GG~~ 263 (507)
++ .+++||++.+..
T Consensus 288 t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 288 ADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEEEETTEEEEEEEECCG
T ss_pred EEeccccCCeEEEEeeec
Confidence 44 467899998753
No 402
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=63.43 E-value=41 Score=25.21 Aligned_cols=21 Identities=5% Similarity=0.237 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHH
Q 010571 467 IENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 467 ~e~e~~~~~~~~~~~~~~~~~ 487 (507)
+++++..+.+++..+++++++
T Consensus 77 i~~~i~~le~~~~~~~~~l~~ 97 (107)
T 1fxk_A 77 LQLREKTIERQEERVMKKLQE 97 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555555554443
No 403
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=62.66 E-value=30 Score=29.14 Aligned_cols=11 Identities=27% Similarity=0.718 Sum_probs=4.8
Q ss_pred hhhhhHHHHHH
Q 010571 411 ENSRFREKIDE 421 (507)
Q Consensus 411 ~~~~l~~~~~~ 421 (507)
+.++|.+.|+.
T Consensus 116 EN~~Lh~~ie~ 126 (209)
T 2wvr_A 116 ENEKLHKEIEQ 126 (209)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444444
No 404
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=62.52 E-value=49 Score=25.21 Aligned_cols=18 Identities=17% Similarity=0.401 Sum_probs=7.0
Q ss_pred HHHHHHHHHhHHHHHHHH
Q 010571 468 ENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 468 e~e~~~~~~~~~~~~~~~ 485 (507)
++++..+.++++.+++++
T Consensus 83 e~~i~~le~~~~~l~~~l 100 (117)
T 2zqm_A 83 EVRLNALERQEKKLNEKL 100 (117)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444444333333
No 405
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=61.82 E-value=1.2e+02 Score=29.55 Aligned_cols=153 Identities=9% Similarity=-0.025 Sum_probs=80.9
Q ss_pred eeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCC---CCCCCcccceEEEE--CCEEEEEcCcCCCCCccCc
Q 010571 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSG---KVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 95 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g---~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~ 169 (507)
+++.+++++|+|-|. .+|+++.....+....... .+|.. --++... ++++|+|=|. .
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~LP~~--iDAa~~~~~~g~~~fFKg~--------~ 328 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQLPNG--LEAAYEFADRDEVRFFKGN--------K 328 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTSCSS--CCEEEEEGGGTEEEEEETT--------E
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCCCCC--eeEEEEEcCCCeEEEEeCC--------E
Confidence 455679999999774 2666665554443332221 12322 1122222 5789988663 4
Q ss_pred EEEEEcCC---CcEEEee-cCCCCCC--CCCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-----eee-
Q 010571 170 VHFLDLET---MTWDAVE-VTQTPPA--PRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEI- 236 (507)
Q Consensus 170 ~~~~d~~t---~~W~~~~-~~g~~p~--~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~- 236 (507)
+|+|+..+ +-=..+. ..| .|. .... ++... .++++|+|-| +..|+||..+..-.. +..
T Consensus 329 ~W~~~~~~~~~gyP~~i~~~~g-~P~~~~~ID-AA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~ 399 (450)
T 1su3_A 329 YWAVQGQNVLHGYPKDIYSSFG-FPRTVKHID-AALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHD 399 (450)
T ss_dssp EEEEETTEECTTCSEEHHHHHC-CCTTCCCCC-EEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHH
T ss_pred EEEecCCcccCCCceeeehhhc-CCCCCCccc-eEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhc
Confidence 66665321 0001111 112 121 1222 33333 3578999988 679999986543221 110
Q ss_pred cCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEE
Q 010571 237 KGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~ 283 (507)
-+..| ..-.+++..++++|+|-|. ..|.||..+.+-..
T Consensus 400 fpgip--~~iDAA~~~~g~~YFFkg~-------~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 400 FPGIG--HKVDAVFMKDGFFYFFHGT-------RQYKFDPKTKRILT 437 (450)
T ss_dssp STTSC--SCCSEEEEETTEEEEEETT-------EEEEEETTTTEEEE
T ss_pred CCCCC--CCccEEEEcCCeEEEEeCC-------EEEEEECCcceEec
Confidence 01122 2223555568899999662 57899987776543
No 406
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=61.57 E-value=1e+02 Score=28.52 Aligned_cols=66 Identities=9% Similarity=0.006 Sum_probs=37.0
Q ss_pred CCEEEEEcCcCCCCCccCc-EEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCC
Q 010571 151 GSRLIIFGGEDRSRKLLND-VHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 151 ~~~l~~~GG~~~~~~~~~~-~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++.+++.|+.+ .. +.++|+.+++-...-..|. ....-.+++...++.+++.|+.+ ..+.+||+...
T Consensus 206 ~g~~l~s~s~d------~~~v~iwd~~~~~~~~~~~~g~--h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQD------GTIIRVFKTEDGVLVREFRRGL--DRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETT------CSEEEEEETTTCCEEEEEECTT--CCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCC------CCEEEEEECCCCcEEEEEEcCC--CCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 45666777653 35 8889998776543321110 11122233444566677777754 45778887654
No 407
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=61.53 E-value=1.1e+02 Score=28.96 Aligned_cols=152 Identities=14% Similarity=0.168 Sum_probs=76.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEcccCCCCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-...-... .......++.+ ++.+++.|+.+.
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~----------------~h~~~v~~~~~s~~~~~l~s~~~dg--- 236 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENS----------------PRHGAVSSICIDEECCVLILGTTRG--- 236 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECC----------------GGGCCEEEEEECTTSCEEEEEETTS---
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccC----------------CCCCceEEEEECCCCCEEEEEcCCC---
Confidence 36677777643 46889999886543322110 01112223333 566777776542
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCcccceEEEE-----CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCC-
Q 010571 115 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT- 188 (507)
Q Consensus 115 ~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~-----~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~- 188 (507)
.+.+||+.++.....- ..+....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-...-....
T Consensus 237 ---~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~ 304 (437)
T 3gre_A 237 ---IIDIWDIRFNVLIRSW---SFGDHAPITHVEVCQFYGKNSVIVVGGSSK------TFLTIWNFVKGHCQYAFINSDE 304 (437)
T ss_dssp ---CEEEEETTTTEEEEEE---BCTTCEEEEEEEECTTTCTTEEEEEEESTT------EEEEEEETTTTEEEEEEESSSS
T ss_pred ---eEEEEEcCCccEEEEE---ecCCCCceEEEEeccccCCCccEEEEEcCC------CcEEEEEcCCCcEEEEEEcCCC
Confidence 3889999887554322 11111111111111 23455555543 258889988766433321110
Q ss_pred -C------C--------------CCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCc
Q 010571 189 -P------P--------------APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 189 -~------p--------------~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
. | ....-.+++.. ++.+++.||.+ ..|.+||+.+..
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 305 QPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred CCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCC-----CeEEEEECCCcc
Confidence 0 0 00111223333 56677788765 468899987764
No 408
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=61.51 E-value=73 Score=30.54 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=21.1
Q ss_pred chhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccch
Q 010571 387 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHS 427 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 427 (507)
+...++.|+.....+...-...++-...|+......++...
T Consensus 36 V~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~~~~ 76 (411)
T 3ghg_C 36 VDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKP 76 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCCCT
T ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccCCCC
Confidence 34456666666666555555544455555544444444433
No 409
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=61.20 E-value=39 Score=23.65 Aligned_cols=70 Identities=11% Similarity=0.115 Sum_probs=0.0
Q ss_pred hhHHHHHHhhccchhhHHhHHHHHhhHhhh-hhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 414 RFREKIDEVNSTHSELSKELSSVQGQLVAE-RSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 414 ~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
+|...|.++..+.++. .+..+.+.+.. +.+.++++.....-...++. ...|+.++++.++.|+-+++.++
T Consensus 6 DL~~il~eiRaQYE~i---a~knr~EaE~~y~~k~eel~~~~~~~~~~l~~---~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 6 DCTAAMRDVRQQYESV---AAKNLQEAEEWYKSKFADLSEAANRNNDALRQ---AKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp CCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHHHHHHHHHHHHHHHhhc
No 410
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=60.99 E-value=2e+02 Score=31.77 Aligned_cols=227 Identities=9% Similarity=-0.015 Sum_probs=0.0
Q ss_pred ccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEE
Q 010571 29 YKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLIL 106 (507)
Q Consensus 29 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~ 106 (507)
.|+++....+.+ ++|..........++.|+.....|..-.+... ........+++++.. ++...++
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~-----------~~~~~sylGySVa~~~~~g~~~~v 402 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQEN-----------VDMRDSYLGYSTELALWKGVQSLV 402 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSC-----------CCCCSCCBTSSEECCCCSSSCEEE
T ss_pred ccccceecCCcc-eEcccccCCccceeEEecCCCcceeecccccc-----------ccccccccceeeEEeccCCceEEE
Q ss_pred cccCCCCCCcceEEEEECCCCcEEEee-cCCCCCCCcccceEEEEC------CEEEEEcCcCC-CCCccCcEEEEEcCCC
Q 010571 107 GGHYKKSSDSMIVRFIDLETNLCGVME-TSGKVPVARGGHSVTLVG------SRLIIFGGEDR-SRKLLNDVHFLDLETM 178 (507)
Q Consensus 107 GG~~~~~~~~~~~~~~d~~t~~W~~~~-~~g~~p~~r~~~~~~~~~------~~l~~~GG~~~-~~~~~~~~~~~d~~t~ 178 (507)
-|...... .-.+++|....+.|.... ..|.-.....+++++..+ ..++++|.-.. .......+++|.....
T Consensus 403 ~GAP~~~~-~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~ 481 (1095)
T 3k6s_A 403 LGAPRYQH-TGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRG 481 (1095)
T ss_dssp EEETTGGG-TCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSS
T ss_pred EEcccccc-cceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCC
Q ss_pred c--EEEeecCCCC---CCCCCCceEEEEcCcEE-----EEEeCCCCCcCCCcEEEEECCCC-cE-----EeeeecCCCCC
Q 010571 179 T--WDAVEVTQTP---PAPRYDHSAALHANRYL-----IVFGGCSHSIFFNDLHVLDLQTN-EW-----SQPEIKGDLVT 242 (507)
Q Consensus 179 ~--W~~~~~~g~~---p~~r~~~~~~~~~~~~l-----~i~GG~~~~~~~~~i~~~d~~~~-~W-----~~~~~~~~~p~ 242 (507)
. |......... +..+++.+++.++|=.- +++|.-........+|+|.-..+ .| ..+......+.
T Consensus 482 ~~~~~~~~~l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl~VGAP~~~~~~G~vyi~~g~~~~g~~~~~~q~l~~~~~~~~ 561 (1095)
T 3k6s_A 482 WRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSR 561 (1095)
T ss_dssp TTCCCSCSSCCCCCSCSSCCBTSCEEEEECSSSSSCCEEEEECTTTTTSCCBEEEEEBCSSSCBCSSCSBCCBTTSSCTT
T ss_pred CcceeeeEEeecccCCccccCccceEeecccCCCCCcCEEEeCCcCCCCCCEEEEecCCCCCCccccceEEeecCCCCcc
Q ss_pred CCcceEEEEECCEE-------EEEeccCCCCCcceEEEE
Q 010571 243 GRAGHAGITIDENW-------YIVGGGDNNNGCQETIVL 274 (507)
Q Consensus 243 ~r~~~~~~~~~~~l-------~v~GG~~~~~~~~d~~~~ 274 (507)
....-.++.....+ +++|. ...+++|
T Consensus 562 ~~~FG~sv~~~~D~dgDG~~DL~VGa------~G~v~v~ 594 (1095)
T 3k6s_A 562 LQYFGQALSGGQDLTQDGLVDLAVGA------RGQVLLL 594 (1095)
T ss_dssp CSSEEEEEEECCCCSCSSSCEEEEEE------SSCEEEE
T ss_pred ccccCceeecccccCCCCCccEEEEc------CCCeeEe
No 411
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=60.98 E-value=1.2e+02 Score=29.04 Aligned_cols=188 Identities=11% Similarity=-0.019 Sum_probs=93.2
Q ss_pred CeEeeCCCCCeEEeccCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEECCCCce-eEeeeccccccCcccc
Q 010571 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAW-SNLRLETELDADKTED 81 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W-~~~~~~~~~~~~~~~~ 81 (507)
.+.||+..+.-..+...+ ...+ +++. ++.||+...... ..+++|++.++.- ..+....
T Consensus 154 I~~id~~~g~~~~~~~~~-----~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~~~g~~~--------- 214 (409)
T 3hrp_A 154 VRLISVDDNKVTTVHPGF-----KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPTRIGQLG--------- 214 (409)
T ss_dssp EEEEETTTTEEEEEEETC-----CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEEEEEECC---------
T ss_pred EEEEECCCCEEEEeeccC-----CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCceeEEeeecc---------
Confidence 456777766655554321 1122 2222 455666644221 1688999876432 2221110
Q ss_pred CCccCCCCCccceeeEEE--CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCccc-c-eEEEE--CCEEE
Q 010571 82 SGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGG-H-SVTLV--GSRLI 155 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~-~-~~~~~--~~~l~ 155 (507)
.+....-++++.. ++.||+... ...+++||+.+.....+...+........ + .++.. ++.||
T Consensus 215 -----~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 215 -----STFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp -----TTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred -----chhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 0011112333332 688998322 23699999998876555221111111222 1 34444 47888
Q ss_pred EEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCC--------C--CCCceEEEEcCcEEEEEeC-CCCCcCCCcEEEE
Q 010571 156 IFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA--------P--RYDHSAALHANRYLIVFGG-CSHSIFFNDLHVL 224 (507)
Q Consensus 156 ~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~--------~--r~~~~~~~~~~~~l~i~GG-~~~~~~~~~i~~~ 224 (507)
+.... .+.|++|++... ...+.-.+..+. . ..-..+++..++.||+... . .+.|.++
T Consensus 283 v~d~~------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----~~~I~~~ 350 (409)
T 3hrp_A 283 MSDQN------LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----GYCLRKL 350 (409)
T ss_dssp EEETT------TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----TCEEEEE
T ss_pred EEeCC------CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----CCEEEEE
Confidence 87432 457999987654 333321110000 0 1112344445566888754 2 2568999
Q ss_pred ECCCCcEEeee
Q 010571 225 DLQTNEWSQPE 235 (507)
Q Consensus 225 d~~~~~W~~~~ 235 (507)
++.++....+.
T Consensus 351 ~~~~G~v~~~~ 361 (409)
T 3hrp_A 351 DILDGYVSTVA 361 (409)
T ss_dssp ETTTTEEEEEE
T ss_pred ECCCCEEEEEe
Confidence 97777665543
No 412
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=60.91 E-value=1.4e+02 Score=30.07 Aligned_cols=181 Identities=7% Similarity=-0.052 Sum_probs=87.8
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCC---CCC
Q 010571 118 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP---PAP 192 (507)
Q Consensus 118 ~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~---p~~ 192 (507)
.+.+||..+.+....- ......-.++.+ ++.+++.||.+ ..+..+|+.+++....-..... ...
T Consensus 171 ~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D------~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGD------GTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp CEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred eEEEEECCCCeEeeee-----ccccCceEEEEECCCCCEEEEEECC------CcEEEEECCCCcEeeeeccccccccccC
Confidence 3777787665433221 111111223333 45677777754 3588899887765433211000 011
Q ss_pred CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEEEeccCCCCCcceEE
Q 010571 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETI 272 (507)
Q Consensus 193 r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~ 272 (507)
..-.+++...++..++.||.+ ..+.++|+.+......-..+. ........+..++..++.++.++ .+.
T Consensus 240 ~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~s~s~d~-----~i~ 307 (611)
T 1nr0_A 240 GSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGT--RIEDQQLGIIWTKQALVSISANG-----FIN 307 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS--SGGGCEEEEEECSSCEEEEETTC-----CEE
T ss_pred CCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCC--CccceeEEEEEcCCEEEEEeCCC-----cEE
Confidence 111223333566577777754 468899998876654211111 11112233444666666666443 366
Q ss_pred EEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCC
Q 010571 273 VLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 273 ~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~ 333 (507)
++|+.+..-... +.+ +......+.+..+...++.|+.+ ..+..+|+.+.
T Consensus 308 ~~~~~~~~~~~~--~~g------h~~~v~~l~~spdg~~l~s~s~D----~~v~~Wd~~~~ 356 (611)
T 1nr0_A 308 FVNPELGSIDQV--RYG------HNKAITALSSSADGKTLFSADAE----GHINSWDISTG 356 (611)
T ss_dssp EEETTTTEEEEE--ECC------CSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTC
T ss_pred EEeCCCCCcceE--EcC------CCCCEEEEEEeCCCCEEEEEeCC----CcEEEEECCCC
Confidence 778776542221 111 11123333444443455666654 34666666543
No 413
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=60.71 E-value=11 Score=35.83 Aligned_cols=19 Identities=16% Similarity=0.312 Sum_probs=8.6
Q ss_pred HHHHHHHHhHHHHHHHHHH
Q 010571 469 NEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~~~ 487 (507)
.+++.++.++++.+.+++.
T Consensus 129 a~~~~~~~~l~~~~~~l~~ 147 (369)
T 4dk0_A 129 AEMDVVQENIKQAEIEVNT 147 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444445444444443
No 414
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=60.68 E-value=1e+02 Score=28.23 Aligned_cols=232 Identities=13% Similarity=0.066 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCC-----ceeEeeeccccccCccccCCccCCCCCccceeeEEE--CCEEEEEccc
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSL-----AWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGH 109 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~-----~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 109 (507)
++.+++.|+.+ ..+.++|+.+. .-........ .......+.+ ++.+++.|+.
T Consensus 38 d~~~l~sgs~D-----~~v~iWd~~~~~~~~~~~~~~~~l~~----------------h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 38 DSPVLISGSRD-----KTVMIWKLYEEEQNGYFGIPHKALTG----------------HNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp CCCEEEEEETT-----SCEEEEEECSSCCSSBSEEEEEEECC----------------CSSCEEEEEECSSTTEEEEEET
T ss_pred CCCEEEEEcCC-----CEEEEEECCcCCcccccccccchhcc----------------CCCceEEEEECCCCCEEEEEcC
Q ss_pred CCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCC
Q 010571 110 YKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP 189 (507)
Q Consensus 110 ~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~ 189 (507)
+.. +.++|+.+++....- ..........+..-++..++.||.+.. +.++|+....-.... ..
T Consensus 97 D~~------v~lwd~~~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~~~d~~------i~~wd~~~~~~~~~~---~~ 158 (343)
T 2xzm_R 97 DKT------LRLWDLRTGTTYKRF---VGHQSEVYSVAFSPDNRQILSAGAERE------IKLWNILGECKFSSA---EK 158 (343)
T ss_dssp TSE------EEEEETTSSCEEEEE---ECCCSCEEEEEECSSTTEEEEEETTSC------EEEEESSSCEEEECC---TT
T ss_pred CCc------EEEEECCCCcEEEEE---cCCCCcEEEEEECCCCCEEEEEcCCCE------EEEEeccCCceeeee---cc
Q ss_pred CCCCCCceEEEEcCc-----------EEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEECCEEEE
Q 010571 190 PAPRYDHSAALHANR-----------YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 190 p~~r~~~~~~~~~~~-----------~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
........++.+... .+++.|+.+ ..+.+||.....-..+ ..........+...+++.++
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~----~~h~~~v~~~~~s~~g~~l~ 229 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTF----KAHESNVNHLSISPNGKYIA 229 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEE----ECCSSCEEEEEECTTSSEEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEE----cCccccceEEEECCCCCEEE
Q ss_pred EeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECCCCC
Q 010571 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 259 ~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~~~~ 334 (507)
.|+.++. +.++| +............++....+.+..+..++..|. ...+..+++.+..
T Consensus 230 sgs~dg~-----v~iwd--------~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-----d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 230 TGGKDKK-----LLIWD--------ILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-----DQGVKIFNLMTQS 287 (343)
T ss_dssp EEETTCE-----EEEEE--------SSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-----SSCEEEEESSSCC
T ss_pred EEcCCCe-----EEEEE--------CCCCcccceeecCCCcEEEEEECCCCCEEEEEC-----CCCEEEEEeCCCC
No 415
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=60.29 E-value=86 Score=27.29 Aligned_cols=106 Identities=10% Similarity=0.109 Sum_probs=57.1
Q ss_pred ECCEEEEEcccCCCCCCcceEEEEECCCC----cEEEee--cC---CCCCCC--cccceEEEE---CCEEEEEcCcCCCC
Q 010571 99 WGTKLLILGGHYKKSSDSMIVRFIDLETN----LCGVME--TS---GKVPVA--RGGHSVTLV---GSRLIIFGGEDRSR 164 (507)
Q Consensus 99 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~----~W~~~~--~~---g~~p~~--r~~~~~~~~---~~~l~~~GG~~~~~ 164 (507)
.++++|+|-|. .+|+||..++ ....-+ .. ..+|.. ...--++.. ++++|+|-|.
T Consensus 69 ~~g~~~fFkg~--------~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~---- 136 (225)
T 3oyo_A 69 EASEAYVFSGN--------HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN---- 136 (225)
T ss_dssp STTEEEEEETT--------EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT----
T ss_pred CCCeEEEEcCC--------EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC----
Confidence 47999999773 4889976432 221110 00 012221 001223322 5799999773
Q ss_pred CccCcEEEEEcCCCcEEEe-ecCC-CCCC------CCCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECC
Q 010571 165 KLLNDVHFLDLETMTWDAV-EVTQ-TPPA------PRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 165 ~~~~~~~~~d~~t~~W~~~-~~~g-~~p~------~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~ 227 (507)
..+.||..+.+...- .... ..|. +..--++... .++++|+|-| +..|+||..
T Consensus 137 ----~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 137 ----KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp ----EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred ----eEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 588998766554431 1100 1111 2222233333 5778999988 678999987
No 416
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=60.07 E-value=24 Score=26.16 Aligned_cols=59 Identities=19% Similarity=0.063 Sum_probs=0.0
Q ss_pred HHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHHHHh
Q 010571 430 SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 430 ~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~-~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
+-++..++.++..++..+.+++.......+.++..- .++.++.+++.+.+...++.+++
T Consensus 11 ~~~~~~Lq~~~~~LE~~l~e~E~~~~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~L 70 (95)
T 3mov_A 11 ENLYFQGQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQL 70 (95)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 417
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=59.78 E-value=36 Score=23.67 Aligned_cols=17 Identities=24% Similarity=0.237 Sum_probs=7.0
Q ss_pred HHHHHHHHhHHHHHHHH
Q 010571 469 NEVQILRQQKSAFEQEM 485 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~ 485 (507)
.-+..+.|++..+|..+
T Consensus 32 ssQ~KLKqRit~LE~~~ 48 (74)
T 3swf_A 32 SMQQKLKQRLTKVEKFL 48 (74)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33334444444444443
No 418
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=59.74 E-value=1.2e+02 Score=28.69 Aligned_cols=159 Identities=9% Similarity=0.043 Sum_probs=0.0
Q ss_pred eeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCC-CCcccceEEEE--CCEEEEEcCcCCCCCccCcEE
Q 010571 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVP-VARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVH 171 (507)
Q Consensus 95 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p-~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~ 171 (507)
+++.+++++|+|=|.. +|+++.....-.........| .+..--++... ++++|+|-|. ..|
T Consensus 185 Av~~~~g~~~fFkg~~--------~Wr~~~~~~~~~p~~I~~~wpgLP~~iDAa~~~~~~g~~~fFkg~--------~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDRF--------FWLKVSERPKTSVNLISSLWPTLPSGIEAAYEIEARNQVFLFKDD--------KYW 248 (365)
T ss_dssp CEEEETTEEEEEETTE--------EEECCSSCCCCCEEEHHHHCSSCCSSCCEEEEEGGGTEEEEEETT--------EEE
T ss_pred eEEEcCCeEEEEeCCE--------EEEEcCCCccCCccchhhhccCCCCCccEEEEecCCCEEEEEeCC--------EEE
Q ss_pred EEEcCCCcEEEeecCCCC-CCC---CCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEe-----eeecCCCCC
Q 010571 172 FLDLETMTWDAVEVTQTP-PAP---RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEIKGDLVT 242 (507)
Q Consensus 172 ~~d~~t~~W~~~~~~g~~-p~~---r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~~~~~p~ 242 (507)
+|+.....-..+...... .+. ....+...-.++++|+|-| +..|+||..+..-.. +...-+-.+
T Consensus 249 r~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p 321 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGIG 321 (365)
T ss_dssp ECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTCC
T ss_pred EEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCCC
Q ss_pred CCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEE
Q 010571 243 GRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 243 ~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~ 283 (507)
.....+....++.+|+|=|. ..|.||..+.+-..
T Consensus 322 ~~iDaA~~~~~g~~YfFkg~-------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 322 PKIDAVFYSKNKYYYFFQGS-------NQFEYDFLLQRITK 355 (365)
T ss_dssp SSCSEEEEETTTEEEEEETT-------EEEEEETTTTEEEE
T ss_pred CccceeeEecCCcEEEEeCC-------EEEEEECCccEEec
No 419
>1m5i_A APC protein; coiled-coil, antitumor protein; 2.00A {Homo sapiens} SCOP: h.4.13.1
Probab=59.74 E-value=56 Score=24.92 Aligned_cols=8 Identities=0% Similarity=-0.138 Sum_probs=0.0
Q ss_pred CCCceeee
Q 010571 495 GSGGVWRW 502 (507)
Q Consensus 495 ~~~~~~~~ 502 (507)
++.|-|.|
T Consensus 118 e~~~~~k~ 125 (125)
T 1m5i_A 118 ERSSQNKH 125 (125)
T ss_dssp --------
T ss_pred ccccccCC
Confidence 56666665
No 420
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=59.34 E-value=20 Score=33.76 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=18.5
Q ss_pred HHHHHHhHHHHHHHHHHhhcccccC-----CCc-eeeeecCC
Q 010571 471 VQILRQQKSAFEQEMERATSVQTQG-----SGG-VWRWIAGG 506 (507)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~ 506 (507)
+.+++++++++.++..... ..... +++ .|.+|.|+
T Consensus 178 I~~Lq~eI~~l~~~I~~~~-~~i~~~~~~~~g~~i~~~i~Gg 218 (346)
T 2nrj_A 178 VDADQKRLEEVLGSVNYYK-QLESDGFNVMKGAILGLPIIGG 218 (346)
T ss_dssp HHHHHHHHHHHTGGGCGGG-CCC--CCGGGTSCEEEEEETTT
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhccccccccceehhhhhhH
Confidence 5666666666666665222 11122 222 48888875
No 421
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=58.94 E-value=14 Score=36.44 Aligned_cols=17 Identities=12% Similarity=0.315 Sum_probs=6.6
Q ss_pred HHHHHHHHhHHHHHHHH
Q 010571 469 NEVQILRQQKSAFEQEM 485 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~ 485 (507)
+++..+.+++..+++++
T Consensus 85 ~~i~~le~~~~~~~~~~ 101 (485)
T 3qne_A 85 NEKKEIIEKEAEADKNL 101 (485)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333344433
No 422
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=58.91 E-value=1.1e+02 Score=28.20 Aligned_cols=66 Identities=9% Similarity=0.002 Sum_probs=35.2
Q ss_pred EcCcEEEEEeCCCCCcCCCc-EEEEECCCCcEEeeeecCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcceEEEEEcC
Q 010571 201 HANRYLIVFGGCSHSIFFND-LHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 201 ~~~~~l~i~GG~~~~~~~~~-i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~d~~~~d~~ 277 (507)
..++.+++.|+.+ .. +.++|+.+..-...-..+.. . ..-.++.+ ++.+++.|+.++ .+.++|+.
T Consensus 204 s~~g~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h--~-~~v~~~~~s~~~~~l~s~s~d~-----~v~iw~~~ 270 (355)
T 3vu4_A 204 NRKSDMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLD--R-ADVVDMKWSTDGSKLAVVSDKW-----TLHVFEIF 270 (355)
T ss_dssp CTTSSEEEEEETT-----CSEEEEEETTTCCEEEEEECTTC--C-SCEEEEEECTTSCEEEEEETTC-----EEEEEESS
T ss_pred CCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC--C-CcEEEEEECCCCCEEEEEECCC-----EEEEEEcc
Confidence 3556577777755 34 88899887654332110101 1 11122333 466777776442 46777775
Q ss_pred cC
Q 010571 278 KL 279 (507)
Q Consensus 278 ~~ 279 (507)
..
T Consensus 271 ~~ 272 (355)
T 3vu4_A 271 ND 272 (355)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 423
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=58.60 E-value=1e+02 Score=27.70 Aligned_cols=57 Identities=21% Similarity=0.221 Sum_probs=29.6
Q ss_pred cceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCC
Q 010571 144 GHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCS 213 (507)
Q Consensus 144 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~ 213 (507)
.|+++.-++.+|.+|-......-... ........+. .-..|+++.. ++.+|.+|-..
T Consensus 190 ~hs~al~~G~v~~wG~n~~gqlg~p~-----~~~~~v~~i~-------~G~~h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 190 FHSLALKDGKVIAWGDNRYKQTTVPT-----EALSGVSAIA-------SGEWYSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTCCCG-----GGGSSCCEEE-------ECSSCEEEEE-TTEEEEESTTC
T ss_pred CEEEEEECCeEEEEECCCCCCCCCCc-----ccCCCceEEE-------cCCCEEEEEE-CCEEEEecCCC
Confidence 45555567799999864322110000 0011222232 1235777777 88899988643
No 424
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=58.59 E-value=12 Score=35.16 Aligned_cols=16 Identities=6% Similarity=0.169 Sum_probs=6.3
Q ss_pred HHHHHHhHHHHHHHHH
Q 010571 471 VQILRQQKSAFEQEME 486 (507)
Q Consensus 471 ~~~~~~~~~~~~~~~~ 486 (507)
++.++.++++.+.+++
T Consensus 130 l~~~~a~l~~a~a~l~ 145 (341)
T 3fpp_A 130 IGTIDAQIKRNQASLD 145 (341)
T ss_dssp HHHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333344444444443
No 425
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=57.88 E-value=16 Score=20.95 Aligned_cols=24 Identities=8% Similarity=0.220 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHh
Q 010571 465 QTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 465 ~~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
.+++.+.+++..++..++.|+...
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl 27 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARV 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345556666666666666665543
No 426
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=57.43 E-value=47 Score=23.35 Aligned_cols=14 Identities=21% Similarity=0.366 Sum_probs=5.1
Q ss_pred HHHHHHhHHHHHHH
Q 010571 471 VQILRQQKSAFEQE 484 (507)
Q Consensus 471 ~~~~~~~~~~~~~~ 484 (507)
...++..+.++.++
T Consensus 54 V~~lq~Ki~elkrq 67 (78)
T 2ic6_A 54 VSALETKLGELKRE 67 (78)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 427
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=57.29 E-value=76 Score=25.73 Aligned_cols=29 Identities=21% Similarity=0.213 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010571 450 LEAQIAELQKMLESSQTIENEVQILRQQK 478 (507)
Q Consensus 450 ~e~~~~e~~~~~~~~~~~e~e~~~~~~~~ 478 (507)
.++++.+.++.+...+....++.++++++
T Consensus 112 ~~~~l~e~e~~leeyK~Kl~rv~~vkkeL 140 (152)
T 4fla_A 112 QKDVLSEKEKKLEEYKQKLARVTQVRKEL 140 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444443333444444333
No 428
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=57.22 E-value=79 Score=30.70 Aligned_cols=15 Identities=7% Similarity=0.328 Sum_probs=6.4
Q ss_pred hhHHhhHHHHHHHHH
Q 010571 389 TDIDAIKEDKRVLEL 403 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~ 403 (507)
..++.|+....++..
T Consensus 95 ~dl~~Le~~l~~isn 109 (461)
T 3ghg_B 95 NSVDELNNNVEAVSQ 109 (461)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh
Confidence 334444444444433
No 429
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=56.71 E-value=19 Score=35.07 Aligned_cols=6 Identities=17% Similarity=0.385 Sum_probs=2.2
Q ss_pred HHHHHH
Q 010571 395 KEDKRV 400 (507)
Q Consensus 395 ~~~~~~ 400 (507)
.++++.
T Consensus 36 ~~~~r~ 41 (425)
T 2dq3_A 36 DKRRRE 41 (425)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 430
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=56.67 E-value=35 Score=22.72 Aligned_cols=15 Identities=13% Similarity=-0.011 Sum_probs=5.4
Q ss_pred HhhhhhhhhhHHHHH
Q 010571 440 LVAERSRCFKLEAQI 454 (507)
Q Consensus 440 ~~~~~~~~~~~e~~~ 454 (507)
+..++.++..++.++
T Consensus 38 n~~L~~~i~~L~~e~ 52 (61)
T 1t2k_D 38 NGQLQSEVTLLRNEV 52 (61)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 431
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=56.45 E-value=24 Score=34.18 Aligned_cols=30 Identities=7% Similarity=-0.052 Sum_probs=11.9
Q ss_pred HHHHHhhHhhhhhhhhhHHHHHHHHHHHHH
Q 010571 433 LSSVQGQLVAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
+.+++++.++++++.++++.++.++++++.
T Consensus 12 l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 41 (412)
T 3u06_A 12 VVHLRQRTEELLRCNEQQAAELETCKEQLF 41 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333334444444444444433
No 432
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=55.84 E-value=1.5e+02 Score=28.83 Aligned_cols=34 Identities=9% Similarity=0.103 Sum_probs=16.0
Q ss_pred hHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH
Q 010571 432 ELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 432 e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
|.+.++..++...+...+.+.++.++..-|+++.
T Consensus 147 q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~ 180 (526)
T 3iyk_A 147 QFDILNKAVTSYNKILTEEDLQMRRLATALQKEI 180 (526)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3444444444444444444455555555555444
No 433
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=55.78 E-value=20 Score=22.43 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHhHH
Q 010571 466 TIENEVQILRQQKS 479 (507)
Q Consensus 466 ~~e~e~~~~~~~~~ 479 (507)
.|++|++.+|++++
T Consensus 10 RLErEIE~Lqrqke 23 (51)
T 2lw9_A 10 RLEKEIEDLQRMKE 23 (51)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45555555555554
No 434
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=55.71 E-value=70 Score=30.82 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=21.7
Q ss_pred HHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHH
Q 010571 400 VLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSV 436 (507)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~ 436 (507)
.++..|.....+..++++.++..+++.+.+++.++..
T Consensus 306 ~lq~~L~~~~~~l~~~~~~~~~k~~~v~~~~~~~~~~ 342 (406)
T 4dyl_A 306 SVQHTLTSVTDELAVATEMVFRRQEMVTQLQQELRNE 342 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555566666666666666666665555544
No 435
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=55.60 E-value=11 Score=33.86 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010571 448 FKLEAQIAELQKMLESSQTIENEVQILRQQK 478 (507)
Q Consensus 448 ~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~ 478 (507)
++|++++.++++++.+.+++++|.++|++.+
T Consensus 29 ~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL 59 (255)
T 2j5u_A 29 QHLKERLEELAQLESEVADLKKENKDLKESL 59 (255)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555566666666666666666665543
No 436
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=55.52 E-value=38 Score=23.95 Aligned_cols=30 Identities=10% Similarity=0.181 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcccc
Q 010571 464 SQTIENEVQILRQQKSAFEQEMERATSVQT 493 (507)
Q Consensus 464 ~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~ 493 (507)
...|++|-.+|+.+++.|.+|+..++..-.
T Consensus 45 ~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll~ 74 (78)
T 1gu4_A 45 VLELTAENERLQKKVEQLSRELSTLRNLFK 74 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335556666666666666666655544433
No 437
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=55.47 E-value=1.5e+02 Score=28.63 Aligned_cols=123 Identities=20% Similarity=0.119 Sum_probs=63.3
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcC---CCCCccCcEEEEEcC
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGED---RSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~---~~~~~~~~~~~~d~~ 176 (507)
.+.+|+.-...... .+.+.++|+.+++=...-+.|..| +.....-+..+|+.--.. ..+...+.+.+||+.
T Consensus 84 ~~~vyV~n~~~~~~--~~~VsVID~~t~~vv~~I~vG~~P----gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 84 ARRVYIQDPAHFAA--ITQQFVIDGSTGRILGMTDGGFLP----HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp TTEEEEEECTTTCS--SEEEEEEETTTTEEEEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCEEEEECCCcCCC--CCeEEEEECCCCEEEEEEECCCCC----ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 46677775432111 168999999998654433333322 111111244677763110 001124579999999
Q ss_pred CCcEEE-eecCCCCC--CCCCCceEEEEc-CcEEEEEeCCCCCcCCCcEEEEECCCCcEE
Q 010571 177 TMTWDA-VEVTQTPP--APRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 177 t~~W~~-~~~~g~~p--~~r~~~~~~~~~-~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
+.+-.. +...+... ....-+.+++.. ++++|+..-. ..+.+.++|+.+++-.
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeEE
Confidence 987543 32210100 011123444443 4567776421 1367999999887654
No 438
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=55.35 E-value=1e+02 Score=29.25 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=14.5
Q ss_pred CCceEEEEcCcEEEEEeCC
Q 010571 194 YDHSAALHANRYLIVFGGC 212 (507)
Q Consensus 194 ~~~~~~~~~~~~l~i~GG~ 212 (507)
..|+++...++.+|.+|-.
T Consensus 274 ~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 274 SQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp TTEEEEEETTSCEEEEECC
T ss_pred CCEEEEEeCCCeEEEEeCC
Confidence 3577777778889999853
No 439
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=55.14 E-value=26 Score=23.73 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=22.0
Q ss_pred HHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 010571 433 LSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILR 475 (507)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~ 475 (507)
|-+--+.+.++...+.+.+....++.++|.-....++|++.+.
T Consensus 7 LveNgekI~~L~~~v~~~e~~Q~~ldq~Ld~Ie~QQ~ELe~~L 49 (64)
T 3t97_C 7 LIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLL 49 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444455555555555555555555555555444444443
No 440
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=55.09 E-value=1.5e+02 Score=28.31 Aligned_cols=121 Identities=14% Similarity=0.066 Sum_probs=61.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE-CCEEEEEcccCCC---
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKK--- 112 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~--- 112 (507)
++.+|+.-... ....+.+.++|+.+++-...-..+ ..-|.++.- +..+|+.......
T Consensus 44 ~~~vyV~~~~~-~~~~~~V~ViD~~t~~v~~~I~vG------------------~~P~va~spDG~~lyVan~~~~r~~~ 104 (386)
T 3sjl_D 44 ARRVYVNDPAH-FAAVTQQFVIDGEAGRVIGMIDGG------------------FLPNPVVADDGSFIAHASTVFSRIAR 104 (386)
T ss_dssp TTEEEEEECGG-GCSSEEEEEEETTTTEEEEEEEEC------------------SSCEEEECTTSSCEEEEEEEEEETTE
T ss_pred CCEEEEEcCcc-cCCCCEEEEEECCCCeEEEEEECC------------------CCCcEEECCCCCEEEEEccccccccc
Confidence 56778774321 111357999999988754322222 112422222 4568887532111
Q ss_pred CCCcceEEEEECCCCcEEEeecCCC---CCCCcccceEEEE--CCEEEEEcCcCCCCCccCcEEEEEcCCCcEE
Q 010571 113 SSDSMIVRFIDLETNLCGVMETSGK---VPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWD 181 (507)
Q Consensus 113 ~~~~~~~~~~d~~t~~W~~~~~~g~---~p~~r~~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~ 181 (507)
....+.+.+||+.+++-..--..+. ......-+.+++- +.++|+.... ..+.+.++|+.+++-.
T Consensus 105 G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-----~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 105 GERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-----PAPAVGVVDLEGKAFK 173 (386)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-----SSCEEEEEETTTTEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-----CCCeEEEEECCCCcEE
Confidence 0114569999999987533221111 0001112222222 4478876421 1357999999987643
No 441
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=54.94 E-value=17 Score=25.20 Aligned_cols=8 Identities=13% Similarity=0.019 Sum_probs=2.9
Q ss_pred hHhhhhhh
Q 010571 439 QLVAERSR 446 (507)
Q Consensus 439 ~~~~~~~~ 446 (507)
+++.++..
T Consensus 51 en~~Lr~~ 58 (70)
T 1gd2_E 51 ENDQLRQK 58 (70)
T ss_dssp HHHHHTTH
T ss_pred HHHHHHHH
Confidence 33333333
No 442
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=54.85 E-value=67 Score=26.08 Aligned_cols=26 Identities=15% Similarity=0.232 Sum_probs=11.1
Q ss_pred hhhhHHHHHHHHHHHHHhHHHHHHHH
Q 010571 446 RCFKLEAQIAELQKMLESSQTIENEV 471 (507)
Q Consensus 446 ~~~~~e~~~~e~~~~~~~~~~~e~e~ 471 (507)
.+.+.+..+.+-++++.+...+.+++
T Consensus 115 ~l~e~e~~leeyK~Kl~rv~~vkkeL 140 (152)
T 4fla_A 115 VLSEKEKKLEEYKQKLARVTQVRKEL 140 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444443
No 443
>4efa_G V-type proton ATPase subunit G; heterotrimer, peripheral stalk, vacuolar ATPase, hydrolase; 2.82A {Saccharomyces cerevisiae} PDB: 4dl0_K 2k88_A 2kwy_A
Probab=54.69 E-value=56 Score=25.26 Aligned_cols=14 Identities=21% Similarity=0.311 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHhHH
Q 010571 466 TIENEVQILRQQKS 479 (507)
Q Consensus 466 ~~e~e~~~~~~~~~ 479 (507)
+.++|+++++.+++
T Consensus 43 EA~~EIe~yR~qkE 56 (119)
T 4efa_G 43 DAAKEIDSYKIQKD 56 (119)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44555555555444
No 444
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=54.65 E-value=20 Score=24.18 Aligned_cols=44 Identities=11% Similarity=0.162 Sum_probs=0.0
Q ss_pred HHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhh
Q 010571 406 TEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFK 449 (507)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 449 (507)
.........|..+++.++.++.+++.++..++.+++.++.-+.+
T Consensus 19 ~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~e 62 (63)
T 1ci6_A 19 QKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEE 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 445
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=54.64 E-value=1.1e+02 Score=26.55 Aligned_cols=156 Identities=11% Similarity=0.122 Sum_probs=0.0
Q ss_pred eeEEECCEEEEEcccCCCCCCcceEEEEECCC-CcEEEeecCCCCCCCcccceEEEE---CCEEEEEcCcCCCCCccCcE
Q 010571 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLET-NLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDV 170 (507)
Q Consensus 95 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t-~~W~~~~~~g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~ 170 (507)
+++..++++|+|=|.. +|+++... ............|.--...-++.. ++++|+|-|. ..
T Consensus 35 Ai~~~~g~~~fFkg~~--------~Wr~~~~~~~~~~P~~I~~~wp~lp~~IDAA~~~~~~~k~yfFkG~--------~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKDRF--------IWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGN--------EY 98 (218)
T ss_dssp EEEEETTEEEEEETTE--------EEEESSTTSCCEEEEEGGGTCTTSCSCCSEEEEETTTTEEEEEETT--------EE
T ss_pred EEEeCCCcEEEEECCE--------EEEEeCCCCccCCCEEHHHhcCCCCCCccEEEEECCCCEEEEEeCC--------EE
Q ss_pred EEEEcCCCcE---EEeecCCCCCCCCCCceEEEE-cCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee---eec-CCCCC
Q 010571 171 HFLDLETMTW---DAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP---EIK-GDLVT 242 (507)
Q Consensus 171 ~~~d~~t~~W---~~~~~~g~~p~~r~~~~~~~~-~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~---~~~-~~~p~ 242 (507)
|+||-.+..- ..+...|-+.....-.++... .++++|+|-| +..|+||..++.-..- ... .-+..
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCC
Q ss_pred CCcceEEEEEC--CEEEEEeccCCCCCcceEEEEEcCcCe
Q 010571 243 GRAGHAGITID--ENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 243 ~r~~~~~~~~~--~~l~v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
|..-.++...+ +.+|+|=|. ..|.||..+..
T Consensus 172 p~~idaAf~~~~~g~~YfFkg~-------~y~~~~~~~~~ 204 (218)
T 1gen_A 172 PDNLDAVVDLQGGGHSYFFKGA-------YYLKLENQSLK 204 (218)
T ss_dssp CSSCSEEEECTTTCEEEEEETT-------EEEEEETTEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECC-------EEEEEECCcee
No 446
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=54.08 E-value=61 Score=23.66 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=0.0
Q ss_pred hhhHHHHHHhhccchhhHHhHHHHHhhHh-hhhhhhhhHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHHH
Q 010571 413 SRFREKIDEVNSTHSELSKELSSVQGQLV-AERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 413 ~~l~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~e~~~~e~~~~~~~~~-~~e~e~~~~~~~~~~~~~~~~ 486 (507)
.+|.+.++.++.+.+...++....+.+.+ .-.-++...=++++.+++.+-+++ .-.+-.+.+.+++..|..|++
T Consensus 10 ~Rl~ELLD~ir~Efe~~~~e~~~~k~q~~~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmKq~YEeEI~rLr~eLe 85 (92)
T 3vp9_A 10 NKLNELLDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLE 85 (92)
T ss_dssp -------CCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 447
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=54.08 E-value=24 Score=24.10 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010571 451 EAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 451 e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
|..+..+..+.....+||.++++...+++.|..++.+.++
T Consensus 14 e~~~~~i~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs 53 (67)
T 1zxa_A 14 EDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQS 53 (67)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 448
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=53.96 E-value=25 Score=32.95 Aligned_cols=88 Identities=11% Similarity=0.087 Sum_probs=0.0
Q ss_pred HHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010571 399 RVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQK 478 (507)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~ 478 (507)
..++..+.+...+...++..++..+.+++..+++++..+.-.++.---..++++...++.....+.+.++.++++++.++
T Consensus 65 ~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l 144 (341)
T 3fpp_A 65 EQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASL 144 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHH
Q 010571 479 SAFEQEME 486 (507)
Q Consensus 479 ~~~~~~~~ 486 (507)
+..+.+++
T Consensus 145 ~~a~~~l~ 152 (341)
T 3fpp_A 145 DTAKTNLD 152 (341)
T ss_dssp TTTTTTTT
T ss_pred HHHHHhhh
No 449
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=53.70 E-value=1.4e+02 Score=27.63 Aligned_cols=239 Identities=7% Similarity=-0.059 Sum_probs=0.0
Q ss_pred eEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECC-CCcEEEee
Q 010571 55 VQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLE-TNLCGVME 133 (507)
Q Consensus 55 ~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~-t~~W~~~~ 133 (507)
++.+|+.++....+.... ........+.+..-+++.++.+... .+.+||.. +++...+.
T Consensus 18 ~~~~d~~~g~l~~~~~~~-------------~~~~~~~~~~a~spdg~~l~~~~~~-------~v~~~~~~~~g~~~~~~ 77 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTE-------------IPQDEPISWMTFDHERKNIYGAAMK-------KWSSFAVKSPTEIVHEA 77 (365)
T ss_dssp EEEEETTTTEEEEEEEEE-------------CCTTCCCSEEEECTTSSEEEEEEBT-------EEEEEEEEETTEEEEEE
T ss_pred EEEEECCCCCEEEeeEEc-------------cCCCCCCcEEEECCCCCEEEEEccc-------eEEEEEECCCCCEEEee
Q ss_pred cCCCCC--CCcccceEEEECCEEEEEcCc-------------CCCCCccCcEEEEEcC-CCcEEEeecCCCCCCCCCCce
Q 010571 134 TSGKVP--VARGGHSVTLVGSRLIIFGGE-------------DRSRKLLNDVHFLDLE-TMTWDAVEVTQTPPAPRYDHS 197 (507)
Q Consensus 134 ~~g~~p--~~r~~~~~~~~~~~l~~~GG~-------------~~~~~~~~~~~~~d~~-t~~W~~~~~~g~~p~~r~~~~ 197 (507)
..+ ......+...-+..+|++-+. ... .+..|++. .+........-........+.
T Consensus 78 ---~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g-----~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (365)
T 1jof_A 78 ---SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG-----YGNVFSVSETGKLEKNVQNYEYQENTGIHG 149 (365)
T ss_dssp ---EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC-----EEEEEEECTTCCEEEEEEEEECCTTCCEEE
T ss_pred ---EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc-----eEEEEccCCCCcCcceEeeEEeCCCCcceE
Q ss_pred EEEEcCcEEEEEeCCCCCcCCCcEEEEECC-CCcEEeeeecCCCC-CCCcceEEEEECCEEEEEeccCCCCCcceEEEEE
Q 010571 198 AALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLV-TGRAGHAGITIDENWYIVGGGDNNNGCQETIVLN 275 (507)
Q Consensus 198 ~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p-~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d 275 (507)
++...+++.+++..... +.+++|++. ++....+....... ...-.+.++.-+++.+++.+.... .-.++.+|
T Consensus 150 ~~~spdG~~l~~~~~~~----~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~--~v~v~~~~ 223 (365)
T 1jof_A 150 MVFDPTETYLYSADLTA----NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN--RICEYVID 223 (365)
T ss_dssp EEECTTSSEEEEEETTT----TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT--EEEEEEEC
T ss_pred EEECCCCCEEEEEcCCC----CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC--eEEEEEEe
Q ss_pred cCcCe----eEEeccCCCCCCCCCCC---------CceEEE-EEcCceEEEEEc-ccCCCcCCeEEEEECC
Q 010571 276 MTKLA----WSILTSVKGRNPLASEG---------LSVCSA-IIEGEHHLVAFG-GYNGKYNNEVFVMRLK 331 (507)
Q Consensus 276 ~~~~~----W~~~~~~~~~~p~~~~~---------~~~~~~-~~~~~~~l~v~G-G~~~~~~~~v~~~~~~ 331 (507)
..+.. ...+..+ |....+ ...... ..+++.+||+.. |.+......+.+|++.
T Consensus 224 ~~~g~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 224 PATHMPVYTHHSFPLI----PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TTTCCEEEEEEEEESS----CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred CCCCcEEEccceEEcC----CCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
No 450
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=53.55 E-value=33 Score=25.06 Aligned_cols=83 Identities=16% Similarity=0.184 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010571 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
...++........++..+...|...++-+...+..+.++.+.+.+.++.+....-|+.....+...-.......+.....
T Consensus 5 ~~~~~~~~~~~~~ei~~L~~~L~~AEeaL~~KQ~~ideLKe~i~q~~~~~E~i~vL~aQ~~iY~~DF~aERaaREk~~~E 84 (96)
T 3fx0_A 5 KSSVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEK 84 (96)
T ss_dssp ---------------------CCSSTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred ccc
Q 010571 492 QTQ 494 (507)
Q Consensus 492 ~~~ 494 (507)
.++
T Consensus 85 Ke~ 87 (96)
T 3fx0_A 85 KEL 87 (96)
T ss_dssp TSC
T ss_pred HHH
No 451
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=53.35 E-value=57 Score=23.06 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=0.0
Q ss_pred hhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010571 427 SELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 427 ~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~ 481 (507)
++.++-|.+.-+++.++.+++..++.++..++++-+.+.++-.+.+.+-.-++.+
T Consensus 23 E~RR~AL~eaL~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~~~~~laevl~~l 77 (79)
T 2zxx_A 23 EQRRKALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQYMAEVIERL 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 452
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=53.27 E-value=39 Score=24.05 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010571 451 EAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 451 e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
++...-+.+-|++..+|.+++++++.++..+.++.++++++
T Consensus 27 E~Rr~AL~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~L~el 67 (83)
T 1wlq_A 27 EQRRKALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEV 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 453
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=53.27 E-value=1.4e+02 Score=27.66 Aligned_cols=239 Identities=7% Similarity=-0.089 Sum_probs=0.0
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCcccc
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~ 81 (507)
.++.+.+++.......+. .....-.+-.....++.||+.-- ....++++++.......+......
T Consensus 52 ~~~I~~i~~~g~~~~~~~---~~~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~------- 116 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLL---NNLENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLE------- 116 (349)
T ss_dssp BSCEEEECTTSCCEEEEE---CSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCS-------
T ss_pred ccceEEEeCCCCeeEEee---cCCCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeCCCC-------
Q ss_pred CCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEE-ECCEEEEEcCc
Q 010571 82 SGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGE 160 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~l~~~GG~ 160 (507)
.-.+.++-..++.||+.-.. .+.++++++....-..+. ......-...++- .++.||+.--.
T Consensus 117 --------~p~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~l~---~~~l~~P~~iavdp~~g~ly~td~~ 179 (349)
T 3v64_C 117 --------SPGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLL---WQSLEKPRAIALHPMEGTIYWTDWG 179 (349)
T ss_dssp --------CCCEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEE---CTTCSCEEEEEEETTTTEEEEEECS
T ss_pred --------CccEEEEecCCCeEEEEcCC------CCeEEEEcCCCCceEEEE---eCCCCCcceEEEecCcCeEEEeccC
Q ss_pred CCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCC
Q 010571 161 DRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 240 (507)
Q Consensus 161 ~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 240 (507)
. .+.|+++++....-..+. ......-..-++...++.||+.-... +.|+++|+....-+.+...+
T Consensus 180 ~-----~~~I~r~~~dG~~~~~~~---~~~~~~PnGla~d~~~~~lY~aD~~~-----~~I~~~~~dG~~~~~~~~~~-- 244 (349)
T 3v64_C 180 N-----TPRIEASSMDGSGRRIIA---DTHLFWPNGLTIDYAGRRMYWVDAKH-----HVIERANLDGSHRKAVISQG-- 244 (349)
T ss_dssp S-----SCEEEEEETTSCSCEESC---CSSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSS--
T ss_pred C-----CCEEEEEeCCCCCcEEEE---ECCCCCcceEEEeCCCCEEEEEECCC-----CEEEEEeCCCCceEEEEeCC--
Q ss_pred CCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCC
Q 010571 241 VTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLA 294 (507)
Q Consensus 241 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~ 294 (507)
...-+++++.++.+|+....+.. +..+|..+..-..+-..+...|..
T Consensus 245 --~~~P~giav~~~~ly~td~~~~~-----V~~~~~~~G~~~~~i~~~~~~p~g 291 (349)
T 3v64_C 245 --LPHPFAITVFEDSLYWTDWHTKS-----INSANKFTGKNQEIIRNKLHFPMD 291 (349)
T ss_dssp --CSSEEEEEEETTEEEEEETTTTE-----EEEEETTTCCSCEEEECSCSCCCC
T ss_pred --CCCceEEEEECCEEEEecCCCCe-----EEEEEccCCCccEEeccCCCCCce
No 454
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=53.15 E-value=61 Score=23.37 Aligned_cols=75 Identities=23% Similarity=0.345 Sum_probs=0.0
Q ss_pred chhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHH
Q 010571 387 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKML 461 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~ 461 (507)
++..+..+..++..+...+...+.....++.+.+.-...-+..+.++...+..++..--.-.++|.++.-+++++
T Consensus 5 Lr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl 79 (86)
T 3swk_A 5 LRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEI 79 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
No 455
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=53.10 E-value=78 Score=28.62 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=0.0
Q ss_pred HHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhH----HHHHHHHHHHHHhHHHHHHHHH
Q 010571 397 DKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKL----EAQIAELQKMLESSQTIENEVQ 472 (507)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~----e~~~~e~~~~~~~~~~~e~e~~ 472 (507)
....++..+....+....++++.+.+..+++++++.......-...+..-.+.. + .-++.....|..-+.+++..
T Consensus 4 ~~~~l~~~~~~~~e~r~~lr~~~eql~~~i~~L~~~ap~W~~aq~al~rL~eq~g~~~~-ds~~v~~~mq~~Le~Ere~~ 82 (302)
T 3ibp_A 4 MIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFT-SSQDVTEYLQQLLEREREAI 82 (302)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCS-SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHhCCcCC-CHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHhHHHHHHHHHHhhcccccCCCce
Q 010571 473 ILRQQKSAFEQEMERATSVQTQGSGGV 499 (507)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (507)
..+.++...+++++..-.+..+-+++.
T Consensus 83 ~~Rd~~a~~k~~Le~~ierLs~pgg~~ 109 (302)
T 3ibp_A 83 VERDEVGARKNAVDEEIERLSQPGGSE 109 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCC
No 456
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=52.97 E-value=1.1e+02 Score=26.41 Aligned_cols=150 Identities=21% Similarity=0.228 Sum_probs=0.0
Q ss_pred eEEE-ECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcccC
Q 010571 32 AAAV-FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY 110 (507)
Q Consensus 32 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 110 (507)
+++. .++.+|+|=| +.+|+++.........+.... ....+.....+... ++++|+|-|..
T Consensus 22 Ai~~~~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~-----------wpgLP~~IDAA~~~-~~~~yfFkG~~ 82 (219)
T 1hxn_A 22 AMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQ-----------WPQGPSTVDAAFSW-EDKLYLIQDTK 82 (219)
T ss_dssp EEEECTTSCEEEEET-------TEEEESSSSSCTTCCEEGGGT-----------CTTSCSSCSEEEEE-TTEEEEEETTE
T ss_pred EEEECCCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhh-----------ccCCCCCccEEEEE-CCcEEEecCCE
Q ss_pred CCCCCcceEEEEE------CCCCcEEEeecCCCCCCC--cccceEEEE---CCEEEEEcCcCCCCCccCcEEEEEcCCCc
Q 010571 111 KKSSDSMIVRFID------LETNLCGVMETSGKVPVA--RGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 111 ~~~~~~~~~~~~d------~~t~~W~~~~~~g~~p~~--r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~d~~t~~ 179 (507)
+|+|+ +..+-=+.+...-.+|.. ...--++.. ++++|+|-|. ..+.||..+.
T Consensus 83 --------yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~--------~ywr~d~~~~- 145 (219)
T 1hxn_A 83 --------VYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR--------RLWWLDLKSG- 145 (219)
T ss_dssp --------EEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT--------EEEEEEGGGG-
T ss_pred --------EEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC--------EEEEEeCCCC-
Q ss_pred EEEeecCCCCCCCCCCceEEEE------------cCcEEEEEeCCCCCcCCCcEEEEEC
Q 010571 180 WDAVEVTQTPPAPRYDHSAALH------------ANRYLIVFGGCSHSIFFNDLHVLDL 226 (507)
Q Consensus 180 W~~~~~~g~~p~~r~~~~~~~~------------~~~~l~i~GG~~~~~~~~~i~~~d~ 226 (507)
...+....|..-..--++.. .++.+|+|-| +..|+||.
T Consensus 146 --P~~i~~~~~g~p~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~ 195 (219)
T 1hxn_A 146 --AQATWTELPWPHEKVDGALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRH 195 (219)
T ss_dssp --GGCCCEEECCSCSCCSEEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESS
T ss_pred --ceEhhhcCCCCCCCcCEEEEccccccccceeccCCeEEEEEC-------CEEEEEeC
No 457
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=52.97 E-value=28 Score=27.73 Aligned_cols=94 Identities=15% Similarity=0.116 Sum_probs=0.0
Q ss_pred HhhHHHHHHHHHhhHHHHhhhhhhHHHH------------HHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHH
Q 010571 392 DAIKEDKRVLELSLTEVRTENSRFREKI------------DEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQK 459 (507)
Q Consensus 392 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~ 459 (507)
.........++........+...+.... +.+.+.++..+..+..+..+++..+....+++..++.+++
T Consensus 29 ~~~~a~~~~le~e~~kl~~e~~i~eas~~~~~~~~le~~~~~l~rdleasr~akk~~ea~la~l~~~~~~LeAE~aKLeE 108 (146)
T 2xnx_M 29 DYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKELEAITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEE 108 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHTTTTTTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHH
Q ss_pred HHHhHH----HHHHHHHHHHHhHHHHHHHH
Q 010571 460 MLESSQ----TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 460 ~~~~~~----~~e~e~~~~~~~~~~~~~~~ 485 (507)
+-+..+ .+.+.+...+..+.+++.++
T Consensus 109 ekQIseASRqgLrRDLeASReAKKqlEadl 138 (146)
T 2xnx_M 109 EKQISDASRQSLRRDLDASREAKKQVEKDL 138 (146)
T ss_dssp GTTTC-------------------------
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
No 458
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=52.88 E-value=3.8 Score=39.18 Aligned_cols=109 Identities=10% Similarity=0.034 Sum_probs=0.0
Q ss_pred cceEEEECCEEEEEcCCCCCccCCceEEEECCCCc--eeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEc
Q 010571 30 KHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILG 107 (507)
Q Consensus 30 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~G 107 (507)
|++..++.+..+++|+ ....++.+|..+++ |+.-. .....+.+..++.+|+.|
T Consensus 1 g~ssP~v~~~~v~~gs-----~dg~v~a~d~~tG~~~W~~~~--------------------~~~~s~p~~~~g~~~v~~ 55 (369)
T 2hz6_A 1 GSSTVTLPETLLFVST-----LDGSLHAVSKRTGSIKWTLKE--------------------DPVLQVPTHVEEPAFLPD 55 (369)
T ss_dssp -------CTTEEEEEE-----TTSEEEEEETTTCCEEEEEEC--------------------CCSCCCC-----CCEEEC
T ss_pred CCCCCeeeCCEEEEEc-----CCCEEEEEECCCCCEEEEecC--------------------CCceecceEcCCCEEEEe
Q ss_pred ccCCCCCCcceEEEEECCCC--cEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCc
Q 010571 108 GHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 108 G~~~~~~~~~~~~~~d~~t~--~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~ 179 (507)
+.+.. ++.+|..++ .|+-.. ..+.......++..++.+|+.+. ...++.+|+.+++
T Consensus 56 s~dg~------l~a~d~~tG~~~w~~~~---~~~~~~~~sp~~~~~~~v~~g~~-------dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 56 PNDGS------LYTLGSKNNEGLTKLPF---TIPELVQASPCRSSDGILYMGKK-------QDIWYVIDLLTGE 113 (369)
T ss_dssp TTTCC------EEEC-----CCSEECSC---CHHHHHTTCSCC-----CCCCEE-------EEEEEEECCC---
T ss_pred CCCCE------EEEEECCCCceeeeeec---cCccccccCceEecCCEEEEEeC-------CCEEEEEECCCCc
No 459
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=52.68 E-value=40 Score=21.09 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=0.0
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHH
Q 010571 442 AERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 442 ~~~~~~~~~e~~~~e~~~~~~~~~-~~e~e~~~~~~~~~~~~~~ 484 (507)
..++++.++|..+.-++-++.++- +.+.-...+.|++..+|..
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~~ 45 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQ 45 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 460
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=52.39 E-value=79 Score=25.51 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=0.0
Q ss_pred HHhhHHHHhhhhhhHHHHHHhhccchhh---HHhHHHHHhhHhhhhhhh-------------------------------
Q 010571 402 ELSLTEVRTENSRFREKIDEVNSTHSEL---SKELSSVQGQLVAERSRC------------------------------- 447 (507)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~e~~~~~~~~~~~~~~~------------------------------- 447 (507)
...+++......+++.+++.+......+ ...+.+.+.-++.++...
T Consensus 8 ~~~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~l~~~~~~ilvplg~~~yv~g~i~~~~~V~v~lG 87 (151)
T 2zdi_C 8 NKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKKIEEEKPEILVPIGAGSFLKGVIVDKNNAIVSVG 87 (151)
T ss_dssp TTHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCEEEEECSSSCEEEEECSCTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCeEEEEEECCCCEEEEEeC
Q ss_pred ------hhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhhcccccCCCce
Q 010571 448 ------FKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERATSVQTQGSGGV 499 (507)
Q Consensus 448 ------~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (507)
...++.+.-+++++..++ ++++.++.++.++..++..+++......+.+.+.
T Consensus 88 ~g~~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~~~~~~~~~~~ 149 (151)
T 2zdi_C 88 SGYAVERSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQKQSMTSFKV 149 (151)
T ss_dssp TTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTTTTCCC
T ss_pred CCeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
No 461
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=52.37 E-value=80 Score=25.62 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhhHHhHHHH----HhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010571 412 NSRFREKIDEVNSTHSELSKELSSV----QGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~ 481 (507)
..+|.-.|.....+.+..++.-++. +..+.+-++--...++.+-....-.+..+.+++++.+++++++++
T Consensus 70 lTqL~nrL~~wlsQ~em~~qks~EFSD~~qTaL~eAQ~AtD~y~~Ainny~~Ads~~~~lekKvn~aq~kLs~L 143 (201)
T 3u0c_A 70 LTALTNKITAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSEL 143 (201)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
No 462
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=52.33 E-value=21 Score=34.63 Aligned_cols=55 Identities=11% Similarity=0.154 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhH
Q 010571 410 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 410 ~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
.+-..|+.++.+++++++++++++++.+.+++.+++++.+.+.+-.++.-+++.+
T Consensus 3 ~~~~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l 57 (412)
T 3u06_A 3 SMHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDL 57 (412)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 463
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=52.19 E-value=19 Score=31.78 Aligned_cols=63 Identities=11% Similarity=0.171 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHhhccchhh---------HHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHH
Q 010571 411 ENSRFREKIDEVNSTHSEL---------SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQI 473 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~---------~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~ 473 (507)
+...+++++..+.+.+++. +..+.+.+.++..+..+..++...+.++++++.++++.-+.+.+
T Consensus 25 ~~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 25 ELEQLRREAAVLREQLENAVGSHAPTRSARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhhcccCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 464
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=52.08 E-value=35 Score=33.48 Aligned_cols=99 Identities=14% Similarity=0.214 Sum_probs=0.0
Q ss_pred hHHhhHHHHHHHHHhhHHHHh-hhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHH
Q 010571 390 DIDAIKEDKRVLELSLTEVRT-ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIE 468 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e 468 (507)
.+..+.+....+...+..-.. +...+-.++-++.++..++..++++++.+.-+..+++.++...-.+.++...+..++.
T Consensus 3 d~~~~r~n~~~~~~~~~~R~~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~ 82 (455)
T 2dq0_A 3 DIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIV 82 (455)
T ss_dssp CHHHHHHCHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHH
T ss_pred CHHHHHhCHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHH
Q ss_pred HHHHHHHHhHHHHHHHHHHh
Q 010571 469 NEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~~~~ 488 (507)
+++..+.+++..+++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~ 102 (455)
T 2dq0_A 83 KRIGELENEVEELKKKIDYY 102 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
No 465
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=51.96 E-value=1.1e+02 Score=30.26 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred hHHhhHHHHHHHHHhhHHHHhhh-hhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHH--------HHHHHH
Q 010571 390 DIDAIKEDKRVLELSLTEVRTEN-SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQI--------AELQKM 460 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~--------~e~~~~ 460 (507)
.+..+.+....+...+..-..+. ..+-.++.++..+..++..++++++.+.-+..+++.++...- .+.++-
T Consensus 42 D~~~ir~n~~~v~~~l~~R~~~~~~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l 121 (501)
T 1wle_A 42 DMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSL 121 (501)
T ss_dssp CHHHHHHSHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHH
T ss_pred CHHHHHhCHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHH
Q ss_pred HHhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010571 461 LESSQTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 461 ~~~~~~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
..+..++.+++..+.+++..+++++++.
T Consensus 122 ~~~~~~l~~~i~~l~~~~~~~~~~l~~~ 149 (501)
T 1wle_A 122 RARGREIRKQLTLLYPKEAQLEEQFYLR 149 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 466
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=51.61 E-value=2.8e+02 Score=30.60 Aligned_cols=230 Identities=13% Similarity=0.069 Sum_probs=0.0
Q ss_pred cceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecC--CCCCCCcccceEEEE---CCEEEEEcCcCCCCCc
Q 010571 92 SDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS--GKVPVARGGHSVTLV---GSRLIIFGGEDRSRKL 166 (507)
Q Consensus 92 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~--g~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~ 166 (507)
.++++....+.+ ++|.-..... .-.++.|+.....|-...+. +.+.....+++.+.- +...|++|.-....
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w-~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~~~~-- 410 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTW-SGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQH-- 410 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTT-TBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETTGGG--
T ss_pred ccccceecCCcc-eEcccccCCc-cceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcccccc--
Q ss_pred cCcEEEEEcCCCcEEEee-cCCCCCCCCCCceEEE-----EcCcEEEEEeCCCC--CcCCCcEEEEECCCCc--EEeeee
Q 010571 167 LNDVHFLDLETMTWDAVE-VTQTPPAPRYDHSAAL-----HANRYLIVFGGCSH--SIFFNDLHVLDLQTNE--WSQPEI 236 (507)
Q Consensus 167 ~~~~~~~d~~t~~W~~~~-~~g~~p~~r~~~~~~~-----~~~~~l~i~GG~~~--~~~~~~i~~~d~~~~~--W~~~~~ 236 (507)
...+++|......|.... ..|.-.....++++++ -+..-++++|.-.. ......+++|....+. |.....
T Consensus 411 ~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~ 490 (1095)
T 3k6s_A 411 TGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAV 490 (1095)
T ss_dssp TCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSS
T ss_pred cceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEE
Q ss_pred cCCC---CCCCcceEEEEECC------EEEEEeccCCCCCcceEEEEEcCcC-ee-----EEeccCCCCCCCCCCCCceE
Q 010571 237 KGDL---VTGRAGHAGITIDE------NWYIVGGGDNNNGCQETIVLNMTKL-AW-----SILTSVKGRNPLASEGLSVC 301 (507)
Q Consensus 237 ~~~~---p~~r~~~~~~~~~~------~l~v~GG~~~~~~~~d~~~~d~~~~-~W-----~~~~~~~~~~p~~~~~~~~~ 301 (507)
.... +..|++++.+.++| .=+++|.-........+|+|.-... .| ..+............|.+++
T Consensus 491 l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl~VGAP~~~~~~G~vyi~~g~~~~g~~~~~~q~l~~~~~~~~~~~FG~sv~ 570 (1095)
T 3k6s_A 491 LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALS 570 (1095)
T ss_dssp CCCCCSCSSCCBTSCEEEEECSSSSSCCEEEEECTTTTTSCCBEEEEEBCSSSCBCSSCSBCCBTTSSCTTCSSEEEEEE
T ss_pred eecccCCccccCccceEeecccCCCCCcCEEEeCCcCCCCCCEEEEecCCCCCCccccceEEeecCCCCccccccCceee
Q ss_pred -EEEEcCceEEEEEcccCCCcCCeEEEEE
Q 010571 302 -SAIIEGEHHLVAFGGYNGKYNNEVFVMR 329 (507)
Q Consensus 302 -~~~~~~~~~l~v~GG~~~~~~~~v~~~~ 329 (507)
..=++++...=++=|. ...+|.|.
T Consensus 571 ~~~D~dgDG~~DL~VGa----~G~v~v~r 595 (1095)
T 3k6s_A 571 GGQDLTQDGLVDLAVGA----RGQVLLLR 595 (1095)
T ss_dssp ECCCCSCSSSCEEEEEE----SSCEEEEE
T ss_pred cccccCCCCCccEEEEc----CCCeeEec
No 467
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=51.36 E-value=35 Score=27.60 Aligned_cols=47 Identities=15% Similarity=0.016 Sum_probs=0.0
Q ss_pred hhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHH
Q 010571 438 GQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 438 ~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~ 484 (507)
++.+.++.+..++++.+.+++++||++...+...+-|-++-++++++
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafknLv~RN~~~e~~ 51 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQ 51 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 468
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=51.33 E-value=1.8e+02 Score=28.12 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=0.0
Q ss_pred chhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhh-hHHHHHHHHHHHHHhHH
Q 010571 387 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF-KLEAQIAELQKMLESSQ 465 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~e~~~~e~~~~~~~~~ 465 (507)
....+..|+.....+.............+...+....++..+.+--..++-++|+....-++ +...+++.++---..++
T Consensus 63 v~~rI~kLkn~L~~~s~s~~~s~~y~~~~~~~lk~~~~q~~dndn~~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~ 142 (491)
T 1m1j_A 63 YSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQ 142 (491)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHhHHH------------------------HHHHHHHhhcccccCCCc
Q 010571 466 TIENEVQILRQQKSA------------------------FEQEMERATSVQTQGSGG 498 (507)
Q Consensus 466 ~~e~e~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~ 498 (507)
.+-.++++|...+.. ++++++++.+......+.
T Consensus 143 ~q~skIQRLE~dI~~q~~~Cr~pC~r~~~y~VD~~~Ye~~QKqLeQv~a~dL~p~~d 199 (491)
T 1m1j_A 143 EQVVEMKRLEVDIDIKIRACKGSCARSFDYQVDKEGYDNIQKHLTQASSIDMHPDFQ 199 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTBSSCCCCCCCTTTTHHHHHHHHHHTTCCCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhHHhhhcHHHHHHHHHHHHHhhccccCCccc
No 469
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=51.27 E-value=19 Score=35.07 Aligned_cols=68 Identities=19% Similarity=0.141 Sum_probs=0.0
Q ss_pred HHhhHhhhhhhhhhHHHHHHHHHHHHHhHH---HHHHHHHHHHHhHHHHHHHHHHhhcccccCCCceeeeecC
Q 010571 436 VQGQLVAERSRCFKLEAQIAELQKMLESSQ---TIENEVQILRQQKSAFEQEMERATSVQTQGSGGVWRWIAG 505 (507)
Q Consensus 436 ~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~---~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (507)
..+-++.+++++++++.++.++++++.+.. +..+++.++.+|+++.++.+.+++..+...+.+ ..|||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~lAg 315 (426)
T 1lrz_A 245 FDEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNE--LPISA 315 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSE--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--ceeEE
No 470
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=51.23 E-value=93 Score=30.31 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=0.0
Q ss_pred HhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHH
Q 010571 392 DAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEV 471 (507)
Q Consensus 392 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~ 471 (507)
.+++++.++ +..+++.-..+.-++..++++++.+.||.+........+++..+.++.+.+.+-+|+...+...+.
T Consensus 294 ~elkqrqee-----e~r~~qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~ 368 (551)
T 2b5u_A 294 DQVKQRQDE-----ENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADA 368 (551)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-----HHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHH
Q ss_pred HHHHHh
Q 010571 472 QILRQQ 477 (507)
Q Consensus 472 ~~~~~~ 477 (507)
.....+
T Consensus 369 ~~~~~~ 374 (551)
T 2b5u_A 369 IAEIKQ 374 (551)
T ss_dssp HHHHHH
T ss_pred HHhhhh
No 471
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=51.20 E-value=78 Score=24.03 Aligned_cols=63 Identities=19% Similarity=0.234 Sum_probs=0.0
Q ss_pred hHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHH-HHhHHHHHHHHHHHHHhHHHHHH
Q 010571 415 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKM-LESSQTIENEVQILRQQKSAFEQ 483 (507)
Q Consensus 415 l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~-~~~~~~~e~e~~~~~~~~~~~~~ 483 (507)
|.-+++.+..+.+...+--++.+.+++.+ .++++++.+++ ....++++.+..+..+.++.+..
T Consensus 37 L~~ELeRLr~~~d~~~K~HE~kklqLkse------~e~E~ae~k~KYD~~lqe~ese~~~kkK~le~~~~ 100 (115)
T 3vem_A 37 FLHELEKLRRESENSKKTFEEKKSILKAE------LERKMAEVQAEFRRKFHEVEAEHNTRTTKIEKDKN 100 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 472
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=51.02 E-value=2.5e+02 Score=29.74 Aligned_cols=228 Identities=7% Similarity=-0.095 Sum_probs=0.0
Q ss_pred CCCCeEeeCCCCCeEEeccCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEECCC----CceeEeeeccccccC
Q 010571 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRS----LAWSNLRLETELDAD 77 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t----~~W~~~~~~~~~~~~ 77 (507)
..+...+++....+..+. .....-.+......++.||+.-. ....|+++++.. .....+......
T Consensus 403 ~~~Ir~i~l~~~~~~~l~---~~~~~~~gl~~d~~~~~lY~sD~-----~~~~I~~~~l~g~~~~~~~~~vi~~~l~--- 471 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVISRDIQ--- 471 (791)
T ss_dssp BSSEEEECTTSCCCEEEE---CSCSSEEEEEEETTTTEEEEEET-----TTTEEEEEEC--------CEEEECSSCS---
T ss_pred ccceeEeeccCCcceeee---cCCCceEEEeecccCCeeEEeec-----cceeEEEEeccCCCCCcceeEEEecCCC---
Q ss_pred ccccCCccCCCCCccceeeEEECCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEE
Q 010571 78 KTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIF 157 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~ 157 (507)
.-.+.++-.++++||+.-.. ...|+++++....-..+.. .....-.+.++-..++.||+.
T Consensus 472 ------------~P~GLAvD~~~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~--~~l~~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 472 ------------APDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFR--ENGSKPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp ------------CCCEEEEETTTTEEEEEETT------TTEEEEEETTSSSEEEEEE--CTTCCEEEEEEETTTTEEEEE
T ss_pred ------------CcceeeeeecCCcEEEEecC------CCeEEEEeCCCCeEEEEEe--CCCCCcceEEEecCCCCEEEe
Q ss_pred cCcCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeec
Q 010571 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 158 GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
--.. ...|+++++....-..+. ......-..-++-..++.||+.-... +.|+++++....-..+ .
T Consensus 532 D~g~-----~~~I~~~~~dG~~~~~lv---~~~l~~P~GLavD~~~~~LYwaD~~~-----~~I~~~d~dG~~~~~v--~ 596 (791)
T 3m0c_C 532 DWGT-----PAKIKKGGLNGVDIYSLV---TENIQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTI--L 596 (791)
T ss_dssp ECSS-----SCEEEEEETTSCCEEEEE---CSSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEE--E
T ss_pred cCCC-----CCeEEEEecCCCceEEEE---eCCCCCceEEEEecCCCeEEEEeCCC-----CcEEEEecCCCceEEE--e
Q ss_pred CCCCCCCcceEEEEECCEEEEEeccCCCCCcceEEEEEcCcCe
Q 010571 238 GDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~d~~~~d~~~~~ 280 (507)
.....-...+++++.+++||+.-..+.. ++++|..+..
T Consensus 597 ~~~~~l~~P~glav~~~~lYwtD~~~~~-----I~~~dk~tG~ 634 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVFEDKVFWTDIINEA-----IFSANRLTGS 634 (791)
T ss_dssp ECTTTTSSEEEEEEETTEEEEEETTTTE-----EEEEETTTCC
T ss_pred cCCCccCCCCEEEEeCCEEEEEECCCCE-----EEEEeCCCCc
No 473
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=50.92 E-value=70 Score=23.42 Aligned_cols=70 Identities=14% Similarity=0.259 Sum_probs=0.0
Q ss_pred hHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHh-HHHHHhhHhhhhhhhhhHHHHHHHHHHHHH
Q 010571 390 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKE-LSSVQGQLVAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
.++.|+.+....+..|.. -..+|+.....++...-+..+. ++..+.....++.++.+++.++++....-+
T Consensus 6 ~i~eLq~e~~~~E~QL~~---A~QKLkdA~~~~e~DPDevNk~~~~~R~~~V~~lq~Ki~elkr~lAd~v~~~k 76 (96)
T 2ic9_A 6 TLKEVQDNITLHEQRLVT---TRQKLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADLIAAQK 76 (96)
T ss_dssp THHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
No 474
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=50.70 E-value=1.6e+02 Score=27.81 Aligned_cols=150 Identities=16% Similarity=0.119 Sum_probs=0.0
Q ss_pred ccceEEEE-CCEEEEEcC--------CCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEE
Q 010571 29 YKHAAAVF-DQKLYIVGG--------SRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW 99 (507)
Q Consensus 29 ~~~~~~~~-~~~lyv~GG--------~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~ 99 (507)
..|++++. ++.||.||- ........-..+-.+.......+..- ....|+++..
T Consensus 168 ~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G------------------~g~~~t~~l~ 229 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG------------------SGDAQTLCLT 229 (389)
T ss_dssp SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC------------------CSSCEEEEEE
T ss_pred cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc------------------CCCcEEEEEc
Q ss_pred -CCEEEEEc-------ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECC-EEEEEc-------CcCCC
Q 010571 100 -GTKLLILG-------GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGS-RLIIFG-------GEDRS 163 (507)
Q Consensus 100 -~~~iyv~G-------G~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~l~~~G-------G~~~~ 163 (507)
++.+|.|| |.........-..+-.+.......+. .-..|+++...+ .+|.+| |....
T Consensus 230 ~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~-------~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~ 302 (389)
T 3kci_A 230 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE-------CGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 302 (389)
T ss_dssp TTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEE-------EETTEEEEEETTSCEEEEECCGGGTTCSSSC
T ss_pred cCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEe-------CCCCEEEEEeCCCeEEEEeCCCCCCCCCCCC
Q ss_pred CCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEe
Q 010571 164 RKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 164 ~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~G 210 (507)
.....-..+-.+.......+. .-..|+++...++.+|.+|
T Consensus 303 ~~~~~P~~v~~l~~~~v~~ia-------~G~~h~~al~~~G~v~~wG 342 (389)
T 3kci_A 303 DHVRRPRQVQGLQGKKVIAIA-------TGSLHCVCCTEDGEVYTWG 342 (389)
T ss_dssp CCEEEEEECGGGTTCCEEEEE-------ECSSEEEEEETTCCEEEEE
T ss_pred ccccCCeEeccCCCCCEEEEE-------eccCeEEEECCCCCEEEee
No 475
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=50.63 E-value=31 Score=23.25 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=0.0
Q ss_pred HHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHh
Q 010571 420 DEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 420 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
+.....+.+++.+...+..++..++.++..++.++..+...+..
T Consensus 19 ~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~~ 62 (63)
T 2wt7_A 19 NRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAA 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 476
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=50.58 E-value=84 Score=25.07 Aligned_cols=68 Identities=9% Similarity=0.020 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010571 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKS 479 (507)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~ 479 (507)
.+++++.+..............+.++++++.+++++.+++..+..++.++...++...+.++.....+
T Consensus 62 L~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 129 (142)
T 3gp4_A 62 IEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFN 129 (142)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
No 477
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=50.53 E-value=1.4e+02 Score=26.80 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=0.0
Q ss_pred ccceEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEEECCEEEEEcc
Q 010571 29 YKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGG 108 (507)
Q Consensus 29 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG 108 (507)
..|+++.-++.||.||-...++.--...+ ......+.. ...+..+.. ++.||.+|-
T Consensus 72 ~~hs~~l~~G~v~~wG~n~~Gqlg~P~~~----~~~v~~ia~-------------------G~~hs~al~-~G~v~~wG~ 127 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGNEDGQTTVPAEA----RSGVDAIAA-------------------GAWASYALK-DGKVIAWGD 127 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTSTTCCCGGG----SSSEEEEEE-------------------ETTEEEEEE-TTEEEEEEC
T ss_pred CCEEEEEECCEEEEeeCCCCCCCCCCccc----CCCeEEEEC-------------------cCCEEEEEe-CCeEEEecC
Q ss_pred cCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeecCCC
Q 010571 109 HYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT 188 (507)
Q Consensus 109 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~ 188 (507)
.......... ........+. .-..|+++.-++.+|.+|-......-..... ......+.
T Consensus 128 n~~gqlg~~~-----~~~~~i~~i~-------~G~~~~~~l~~G~v~~wG~n~~gqlg~p~~~-----~~~v~~i~---- 186 (282)
T 3qhy_B 128 DSDGQTTVPA-----EAQSGVTALD-------GGVYTALAVKNGGVIAWGDNYFGQTTVPAEA-----QSGVDDVA---- 186 (282)
T ss_dssp CTTSTTSCCG-----GGGSSEEEEE-------ECSSEEEEEETTEEEEEECCTTSTTSCCGGG-----GSSEEEEE----
T ss_pred CCCCcCCCCc-----cCCCCeEEEE-------cccCEEEEEECCEEEEecCCCCCCCCCceec-----CCCeEEEE----
Q ss_pred CCCCCCCceEEEEcCcEEEEEe
Q 010571 189 PPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 189 ~p~~r~~~~~~~~~~~~l~i~G 210 (507)
.-..|+++. .++.+|.+|
T Consensus 187 ---~G~~hs~al-~~G~v~~wG 204 (282)
T 3qhy_B 187 ---GGIFHSLAL-KDGKVIAWG 204 (282)
T ss_dssp ---ECSSEEEEE-ETTEEEEEE
T ss_pred ---ecCCEEEEE-ECCeEEEEE
No 478
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=50.28 E-value=1.8e+02 Score=30.46 Aligned_cols=162 Identities=12% Similarity=0.062 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEECCCC--ce--eEeeeccccccCccccCCccCCCCCccceeeE-EECCEEEEEcccCC
Q 010571 37 DQKLYIVGGSRNGRFLSDVQVFDLRSL--AW--SNLRLETELDADKTEDSGLLEVLPPMSDHCMV-KWGTKLLILGGHYK 111 (507)
Q Consensus 37 ~~~lyv~GG~~~~~~~~~~~~~d~~t~--~W--~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~ 111 (507)
+..|++...... .+.++++|+.+. .+ ..+.... .-..++.. ..++.||+..-..
T Consensus 282 g~~l~~~~~~~~---~~~l~~~d~~~~~~~~~~~~l~~~~-----------------~~~~~s~~~~~g~~l~~~t~~~- 340 (751)
T 2xe4_A 282 TNTLCIGSQSPE---TAEVHLLDLRKGNAHNTLEIVRPRE-----------------KGVRYDVQMHGTSHLVILTNEG- 340 (751)
T ss_dssp SSEEEEEEECSS---CEEEEEEESSSCTTCCCEEESSCCC-----------------TTCCEEEEEETTTEEEEEECTT-
T ss_pred CCEEEEEecCCC---CceEEEEECCCCCCCceeEEeecCC-----------------CCceEEEeeeeCCEEEEEeCCC-
Q ss_pred CCCCcceEEEEECCC-CcEEE-eecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEc-------CCCc-EE
Q 010571 112 KSSDSMIVRFIDLET-NLCGV-METSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL-------ETMT-WD 181 (507)
Q Consensus 112 ~~~~~~~~~~~d~~t-~~W~~-~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~-------~t~~-W~ 181 (507)
......++.+|+.+ ..|.. +. .......-......++.|++..-.+.... ++.+|+ .++. -.
T Consensus 341 -~a~~~~L~~~d~~~~~~~~~~li---~~~~~~~l~~~~~~~~~lv~~~~~~g~~~----l~~~dl~~~~~~~~~g~~~~ 412 (751)
T 2xe4_A 341 -GAVNHKLLIAPRGQPSDWSHVLV---DHSEDVFMESIAVRSNYLVVAGRRAGLTR----IWTMMADSQDGVFKAGTGLR 412 (751)
T ss_dssp -TCTTCEEEEEETTSTTCCCCEEE---CCCSSEEEEEEEECSSEEEEEEEETTEEE----EEEEECCTTTSCCCTTTCCE
T ss_pred -CCCCcEEEEEcCCCcccceeeEE---CCCCCcEEEEEEEECCEEEEEEEeCCEEE----EEEEecccccccccCCccce
Q ss_pred EeecCCCCCCCCCCceE------EEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEee
Q 010571 182 AVEVTQTPPAPRYDHSA------ALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 182 ~~~~~g~~p~~r~~~~~------~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
.+ ..|...+.... ..-++..+|.+.+.... ..++.||+.++..+.+
T Consensus 413 ~l----~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P---~~~~~~d~~~~~~~~l 464 (751)
T 2xe4_A 413 EV----VMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATP---NTWFDVSPQDHSRTAV 464 (751)
T ss_dssp EC----CCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEE---EEEEEECTTTCCEEEE
T ss_pred EE----CCCCceeEEEeccCcccCCCCCEEEEEEeCCCCC---CEEEEEECCCCcEEEE
No 479
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=50.14 E-value=86 Score=24.17 Aligned_cols=79 Identities=15% Similarity=0.111 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH----------HHHHHHHHHHHhHHHH
Q 010571 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----------TIENEVQILRQQKSAF 481 (507)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----------~~e~e~~~~~~~~~~~ 481 (507)
..++.+...+++.-.......+.+.+..-+.-+.++.+.++...++.+++.+++ +......++..-+..|
T Consensus 8 ~~~l~~Leae~q~L~~~E~qry~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~~~keL 87 (119)
T 3etw_A 8 VGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKL 87 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhhc
Q 010571 482 EQEMERATS 490 (507)
Q Consensus 482 ~~~~~~~~~ 490 (507)
+.++..++.
T Consensus 88 d~~ik~qek 96 (119)
T 3etw_A 88 EAEMEQQKA 96 (119)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
No 480
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=50.13 E-value=22 Score=26.02 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=0.0
Q ss_pred HhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcccccCCC
Q 010571 421 EVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSVQTQGSG 497 (507)
Q Consensus 421 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (507)
.+..+......++..+..++...++-+...+..+.+++++..+.+.....+..|+.|.+--...++.+|+..+..-+
T Consensus 7 ~~~~~~~~~~~ei~~L~~~L~~AEeaL~~KQ~~ideLKe~i~q~~~~~E~i~vL~aQ~~iY~~DF~aERaaREk~~~ 83 (96)
T 3fx0_A 7 SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAE 83 (96)
T ss_dssp -------------------CCSSTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 481
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=50.04 E-value=1.7e+02 Score=27.58 Aligned_cols=168 Identities=10% Similarity=-0.002 Sum_probs=0.0
Q ss_pred eEEEECCEEEEEcCCCCCccCCceEEEECCCCceeEeeeccccccCccccCCccCCCCCccceeeEE-ECCEEEEEcccC
Q 010571 32 AAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHY 110 (507)
Q Consensus 32 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 110 (507)
++..+.+.+|+|=| +.+|+++.....-........ ....|.....+... .++++|+|-|..
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~-----------wpgLP~~iDAa~~~~~~g~~~fFkg~~ 246 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSL-----------WPTLPSGIEAAYEIEARNQVFLFKDDK 246 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHH-----------CSSCCSSCCEEEEEGGGTEEEEEETTE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhh-----------ccCCCCCccEEEEecCCCEEEEEeCCE
Q ss_pred CCCCCcceEEEEECCCCcE---EEeecCCCCCCCcccceEEEEC--CEEEEEcCcCCCCCccCcEEEEEcCCCcEEEeec
Q 010571 111 KKSSDSMIVRFIDLETNLC---GVMETSGKVPVARGGHSVTLVG--SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEV 185 (507)
Q Consensus 111 ~~~~~~~~~~~~d~~t~~W---~~~~~~g~~p~~r~~~~~~~~~--~~l~~~GG~~~~~~~~~~~~~~d~~t~~W~~~~~ 185 (507)
+|+|+..+..- +.+...|-+.....--++.... +++|+|-|. ..+.||..+.+-..-.+
T Consensus 247 --------yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~--------~yw~yd~~~~~v~~gyP 310 (365)
T 3ba0_A 247 --------YWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN--------QYWRYDERRQMMDPGYP 310 (365)
T ss_dssp --------EEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT--------EEEEEETTTTEECSSCC
T ss_pred --------EEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC--------EEEEEeCCcceecCCCC
Q ss_pred CC----CCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCC
Q 010571 186 TQ----TPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 240 (507)
Q Consensus 186 ~g----~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 240 (507)
.. -+..+..--++....++++|+|-| +..|+||..+..-........+
T Consensus 311 k~I~~~f~g~p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~~~~~~~w 362 (365)
T 3ba0_A 311 KLITKNFQGIGPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITKTLKSNSW 362 (365)
T ss_dssp CCHHHHSTTCCSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEEEEETTTT
T ss_pred cchhhcCCCCCCccceeeEecCCcEEEEeC-------CEEEEEECCccEEeccccCCcC
No 482
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=49.96 E-value=51 Score=21.56 Aligned_cols=47 Identities=21% Similarity=0.236 Sum_probs=0.0
Q ss_pred HhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH----HHHHHHHHHHHh
Q 010571 431 KELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQ 477 (507)
Q Consensus 431 ~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~ 477 (507)
+|.-+++..+..-+.+++++=+--..+.++++.+| +|+.|...++++
T Consensus 13 qeylevK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr~q 63 (63)
T 2w6a_A 13 QEYLELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQP 63 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhccC
No 483
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=49.73 E-value=3.5 Score=40.30 Aligned_cols=84 Identities=18% Similarity=0.271 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHhhccchhhHHhHHH-HHhhHhhhhhhhhhHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHHHHh
Q 010571 411 ENSRFREKIDEVNSTHSELSKELSS-VQGQLVAERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 411 ~~~~l~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~-~~e~e~~~~~~~~~~~~~~~~~~ 488 (507)
+.++.+.....+++..++.++.+++ +++..+.+++.++++.....++++++++.. ++|.+..++.+++...+.+..+.
T Consensus 324 ~~~~~~~~~~~~~~~e~~~~~~f~~~v~~~e~~l~~~e~~l~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~ 403 (427)
T 2qag_B 324 YEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAA 403 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hccccc
Q 010571 489 TSVQTQ 494 (507)
Q Consensus 489 ~~~~~~ 494 (507)
...|.|
T Consensus 404 ~~~~~~ 409 (427)
T 2qag_B 404 ELLQSQ 409 (427)
T ss_dssp ------
T ss_pred HHHhhh
No 484
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=49.68 E-value=13 Score=31.09 Aligned_cols=42 Identities=24% Similarity=0.413 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010571 449 KLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 449 ~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
++..++.++++.++.+..|..++++++.+++.+.+.+.+.+.
T Consensus 3 ~l~~~~~~l~~~~~~~~~l~~~~~~l~~~l~~~~~~l~~~~~ 44 (182)
T 3kqg_A 3 TLNAQIPELKSDLEKASALNTKIRALQGSLENMSKLLKRQND 44 (182)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 485
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=49.39 E-value=37 Score=23.00 Aligned_cols=45 Identities=11% Similarity=0.199 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHHHHHhHH---------HHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 445 SRCFKLEAQIAELQKMLESSQ---------TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 445 ~~~~~~e~~~~e~~~~~~~~~---------~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
++..+++.++.++++++...- +|.+++.++..+++.+.++++.++
T Consensus 6 ~~~~~l~~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~~ 59 (65)
T 3sja_C 6 KKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 59 (65)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
No 486
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=49.31 E-value=22 Score=18.34 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=0.0
Q ss_pred hhhhhhhhhHHHHHHHHHHHHH
Q 010571 441 VAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 441 ~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
..+-++++++|+.+..++++++
T Consensus 4 delykeledlqerlrklrkklr 25 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
No 487
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=49.25 E-value=46 Score=23.79 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHH
Q 010571 447 CFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 447 ~~~~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~ 486 (507)
+..++++.+.+.+.+.+...++....++.-.++.||.+..
T Consensus 41 I~~Lq~e~~r~~e~e~r~k~le~~n~~l~~riqELE~qa~ 80 (83)
T 4ath_A 41 IRKLQREQQRAKDLENRQKKLEHANRHLLLRVQELEMQAR 80 (83)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
No 488
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=49.13 E-value=99 Score=24.59 Aligned_cols=111 Identities=10% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHh--------------------HHHHHhhHhhhhhhhhhH
Q 010571 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKE--------------------LSSVQGQLVAERSRCFKL 450 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e--------------------~~~~~~~~~~~~~~~~~~ 450 (507)
+..-+.........+..........+.+|..+.....+.... +..+...+...+..+...
T Consensus 14 l~l~~~~ed~a~~~l~~a~~~~~~~~~~L~~L~~~~~~y~~~~~~~~~~g~~~~~l~~~~~fi~~L~~~I~~q~~~l~~~ 93 (150)
T 3ajw_A 14 KDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNLNTDMGNGIASNRWINYQQFIQTLEKAIEQHRLQLTQW 93 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--CCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhHH---HHHHHHHHhhcccccCCCceee
Q 010571 451 EAQIAELQKMLESSQTIENEVQILRQQKS---AFEQEMERATSVQTQGSGGVWR 501 (507)
Q Consensus 451 e~~~~e~~~~~~~~~~~e~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 501 (507)
+..+...++.+.+...-.+.++.|.++.. ..+....|....++-...-+++
T Consensus 94 ~~~~e~~r~~l~~a~~~~k~~e~L~er~~~~~~~~~~r~EQk~~DE~a~~~~~r 147 (150)
T 3ajw_A 94 TQKVDLALKSWREKKQRLQAWQTLQDRQTAAALLAENRMDQKKMDEFAQRAAMR 147 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhc
No 489
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=49.07 E-value=41 Score=24.01 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 010571 450 LEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 450 ~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~ 489 (507)
++..+.-++.-.++.+.++.+++++.++.+.++.++..+.
T Consensus 42 L~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 42 LDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 490
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=48.97 E-value=78 Score=23.34 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=0.0
Q ss_pred cccccchhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHH
Q 010571 382 LSEKDVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKML 461 (507)
Q Consensus 382 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~ 461 (507)
.....+......+....++++..+.. +...++..|..++.++.....+++..-.+.+.+-..-..++.+|+--++-|
T Consensus 12 ~~~~~Lq~~~~~LE~~l~e~E~~~~~---e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIatYrkLL 88 (95)
T 3mov_A 12 NLYFQGQKESRACLERIQELEDLLAK---EKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLL 88 (95)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 491
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=48.96 E-value=1.6e+02 Score=26.87 Aligned_cols=191 Identities=14% Similarity=0.065 Sum_probs=0.0
Q ss_pred eeEEE--------CCEEEEEcccCCCCCCcceEEEEECCCC-----cEEEeecCCCCCCCcccceEEEE--CCEEEEEcC
Q 010571 95 CMVKW--------GTKLLILGGHYKKSSDSMIVRFIDLETN-----LCGVMETSGKVPVARGGHSVTLV--GSRLIIFGG 159 (507)
Q Consensus 95 ~~~~~--------~~~iyv~GG~~~~~~~~~~~~~~d~~t~-----~W~~~~~~g~~p~~r~~~~~~~~--~~~l~~~GG 159 (507)
.++.+ ++.+++.|+.+.. +.++|+.+. .-.... .+......-.++.+ ++.+++.|+
T Consensus 25 ~~~~~~~s~~~~~d~~~l~sgs~D~~------v~iWd~~~~~~~~~~~~~~~---~l~~h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSPVLISGSRDKT------VMIWKLYEEEQNGYFGIPHK---ALTGHNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EEEEECCCSSTTCCCCEEEEEETTSC------EEEEEECSSCCSSBSEEEEE---EECCCSSCEEEEEECSSTTEEEEEE
T ss_pred hheeeEEEeecCCCCCEEEEEcCCCE------EEEEECCcCCcccccccccc---hhccCCCceEEEEECCCCCEEEEEc
Q ss_pred cCCCCCccCcEEEEEcCCCcEEEeecCCCCCCCCCCceEEEEcCcEEEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCC
Q 010571 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 160 ~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~~l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
.+.. +.++|+.+.+....- ......-.+++...++..++.||.+ ..+.+||+....-... ..
T Consensus 96 ~D~~------v~lwd~~~~~~~~~~----~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~~---~~ 157 (343)
T 2xzm_R 96 WDKT------LRLWDLRTGTTYKRF----VGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFSS---AE 157 (343)
T ss_dssp TTSE------EEEEETTSSCEEEEE----ECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEEC---CT
T ss_pred CCCc------EEEEECCCCcEEEEE----cCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceeee---ec
Q ss_pred CCCCCcceEEEEECC------------EEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcC
Q 010571 240 LVTGRAGHAGITIDE------------NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG 307 (507)
Q Consensus 240 ~p~~r~~~~~~~~~~------------~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~ 307 (507)
.........++.+.. .+++.|+.++. +.++|.....-..+... ......+.+..
T Consensus 158 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~-----i~iwd~~~~~~~~~~~h---------~~~v~~~~~s~ 223 (343)
T 2xzm_R 158 KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR-----LKVWNTNFQIRYTFKAH---------ESNVNHLSISP 223 (343)
T ss_dssp TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE-----EEEEETTTEEEEEEECC---------SSCEEEEEECT
T ss_pred ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCE-----EEEEcCCCceeEEEcCc---------cccceEEEECC
Q ss_pred ceEEEEEcccCCCcCCeEEEEEC
Q 010571 308 EHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 308 ~~~l~v~GG~~~~~~~~v~~~~~ 330 (507)
+..+++.|+.+ ..+.++|+
T Consensus 224 ~g~~l~sgs~d----g~v~iwd~ 242 (343)
T 2xzm_R 224 NGKYIATGGKD----KKLLIWDI 242 (343)
T ss_dssp TSSEEEEEETT----CEEEEEES
T ss_pred CCCEEEEEcCC----CeEEEEEC
No 492
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=48.85 E-value=49 Score=21.27 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010571 450 LEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 450 ~e~~~~e~~~~~~~~~~~e~e~~~~~~~~~~~ 481 (507)
+.-++++++++.+++.+-..+-+..+++++.+
T Consensus 15 LkDqV~eL~qe~k~m~k~lEeEqkARk~LE~~ 46 (56)
T 2w6b_A 15 LKDEVQELRQDNKKMKKSLEEEQRARKDLEKL 46 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 493
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=48.69 E-value=1.5e+02 Score=26.66 Aligned_cols=184 Identities=13% Similarity=0.088 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCcccceEEEECCEEEEEcCcCCCCCccCcEEEEEcCCCc
Q 010571 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 100 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~d~~t~~ 179 (507)
++..++.|+.+.. +.+||+.+++-...- .............-++.+++.|+.+.. +.++|+....
T Consensus 76 dg~~l~s~s~D~~------v~~wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~D~~------i~vwd~~~~~ 140 (319)
T 3frx_A 76 DGAYALSASWDKT------LRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKT------IKVWTIKGQC 140 (319)
T ss_dssp TSSEEEEEETTSE------EEEEETTTTEEEEEE---ECCSSCEEEEEECTTSCEEEEEETTSC------EEEEETTSCE
T ss_pred CCCEEEEEeCCCE------EEEEECCCCCeeEEE---ccCCCcEEEEEEcCCCCEEEEEeCCCe------EEEEECCCCe
Q ss_pred EEEeecCCCCCCCCCCceEEEEcCcE------EEEEeCCCCCcCCCcEEEEECCCCcEEeeeecCCCCCCCcceEEEEE-
Q 010571 180 WDAVEVTQTPPAPRYDHSAALHANRY------LIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI- 252 (507)
Q Consensus 180 W~~~~~~g~~p~~r~~~~~~~~~~~~------l~i~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~- 252 (507)
-..+. .....-..+....+.. +++.||.+ ..+.++|+.+..-... .......-.++.+
T Consensus 141 ~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~-----~~~h~~~v~~~~~s 205 (319)
T 3frx_A 141 LATLL-----GHNDWVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEAD-----FIGHNSNINTLTAS 205 (319)
T ss_dssp EEEEC-----CCSSCEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEE-----ECCCCSCEEEEEEC
T ss_pred EEEEe-----ccCCcEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhee-----ecCCCCcEEEEEEc
Q ss_pred -CCEEEEEeccCCCCCcceEEEEEcCcCeeEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcccCCCcCCeEEEEECC
Q 010571 253 -DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 253 -~~~l~v~GG~~~~~~~~d~~~~d~~~~~W~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~v~~~~~~ 331 (507)
++.+++.||.++. +.++|+.+..-...... ......+.+..+..+++.+. ...+.++++.
T Consensus 206 p~g~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~---------~~~v~~~~~sp~~~~la~~~-----~~~i~v~~~~ 266 (319)
T 3frx_A 206 PDGTLIASAGKDGE-----IMLWNLAAKKAMYTLSA---------QDEVFSLAFSPNRYWLAAAT-----ATGIKVFSLD 266 (319)
T ss_dssp TTSSEEEEEETTCE-----EEEEETTTTEEEEEEEC---------CSCEEEEEECSSSSEEEEEE-----TTEEEEEEET
T ss_pred CCCCEEEEEeCCCe-----EEEEECCCCcEEEEecC---------CCcEEEEEEcCCCCEEEEEc-----CCCcEEEEeC
Q ss_pred C
Q 010571 332 P 332 (507)
Q Consensus 332 ~ 332 (507)
.
T Consensus 267 ~ 267 (319)
T 3frx_A 267 P 267 (319)
T ss_dssp T
T ss_pred c
No 494
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=48.56 E-value=40 Score=32.75 Aligned_cols=69 Identities=20% Similarity=0.247 Sum_probs=0.0
Q ss_pred hHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhH
Q 010571 390 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
.+..+.++++.+.......+.+.+.+.++|-. ...++.+++..+...+++++.+++.++.++++++...
T Consensus 29 ~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (421)
T 1ses_A 29 ALLALDREVQELKKRLQEVQTERNQVAKRVPK------APPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 495
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=48.33 E-value=13 Score=34.58 Aligned_cols=50 Identities=12% Similarity=0.201 Sum_probs=0.0
Q ss_pred hhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHh
Q 010571 414 RFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 414 ~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
++-++|..++..+...+.+++.++..++.++.+++++++++.+++.+.+.
T Consensus 1 ~~~~~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~~~i~~l~~~~~~ 50 (319)
T 1fzc_C 1 KMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQE 50 (319)
T ss_dssp ---------CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 496
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=48.11 E-value=29 Score=18.51 Aligned_cols=25 Identities=32% Similarity=0.511 Sum_probs=0.0
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhHH
Q 010571 441 VAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 441 ~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
+.+++++.-++..++.+++++..++
T Consensus 4 ealekkcaalesklqalekkleale 28 (31)
T 3ljm_A 4 EALEKKCAALESKLQALEKKLEALE 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
No 497
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=47.73 E-value=69 Score=22.40 Aligned_cols=44 Identities=11% Similarity=0.177 Sum_probs=0.0
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhHH---------HHHHHHHHHHHhHHHHHHHH
Q 010571 442 AERSRCFKLEAQIAELQKMLESSQ---------TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 442 ~~~~~~~~~e~~~~e~~~~~~~~~---------~~e~e~~~~~~~~~~~~~~~ 485 (507)
++++.+++.+..++.++++|++.. .-++.++|.+..+..+..++
T Consensus 26 ~lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l~r~~ 78 (90)
T 4b6x_A 26 ALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRF 78 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHHHHHH
No 498
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=47.56 E-value=93 Score=30.29 Aligned_cols=75 Identities=12% Similarity=0.187 Sum_probs=0.0
Q ss_pred hhhHHHHHHhhccchhh--HHhHHHHHhhHhhhhhhhhhHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHH
Q 010571 413 SRFREKIDEVNSTHSEL--SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 413 ~~l~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~~e~e~~~~~~~~~~~~~~~~ 486 (507)
.+++++.++-.+..+|+ .+.++..+.++++.+.++++.+..++++++++-..+ ++..++.....++.....+..
T Consensus 294 ~elkqrqeee~r~~qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~~~~~~ 373 (551)
T 2b5u_A 294 DQVKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIK 373 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHhhh
Q ss_pred H
Q 010571 487 R 487 (507)
Q Consensus 487 ~ 487 (507)
+
T Consensus 374 ~ 374 (551)
T 2b5u_A 374 Q 374 (551)
T ss_dssp H
T ss_pred h
No 499
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=47.39 E-value=1.6e+02 Score=26.55 Aligned_cols=101 Identities=12% Similarity=0.097 Sum_probs=0.0
Q ss_pred ccchhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhh-------hhhhHHHHHHHH
Q 010571 385 KDVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERS-------RCFKLEAQIAEL 457 (507)
Q Consensus 385 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-------~~~~~e~~~~e~ 457 (507)
..+.......+..++.++........+..+....+...+.......++++..+...+...+ .+++.+....+.
T Consensus 105 ~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~~~~~~~~~~~~s~~~~eK~~~k~~~~ 184 (305)
T 2efl_A 105 VDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADINVTKADVEKARQQAQIR 184 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHHHH
Q ss_pred HHHHHhHH----------------HHHHHHHHHHHhHHHHHHHH
Q 010571 458 QKMLESSQ----------------TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 458 ~~~~~~~~----------------~~e~e~~~~~~~~~~~~~~~ 485 (507)
.++..... ..+.++..+.+.++.++.+.
T Consensus 185 ~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~lQ~le~~r 228 (305)
T 2efl_A 185 HQMAEDSKADYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERR 228 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 500
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=47.13 E-value=70 Score=22.59 Aligned_cols=75 Identities=13% Similarity=0.130 Sum_probs=0.0
Q ss_pred cCCCCCcccccchhhHHhhHHHHHHHHHhhHHHHhhhhhhHHHHHHhhccchhhHHhHHHHHhhHhhhhhhhhhH
Q 010571 376 AGIGNDLSEKDVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKL 450 (507)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 450 (507)
+|.........-..|...-..........-.........++.....++.++..+..+++.++.++..++..+.++
T Consensus 2 ~~~~kk~~dk~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll~q~ 76 (78)
T 1gu4_A 2 KSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQL 76 (78)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred CCCccCCcccCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Done!