BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>010572
MVKAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRD
GDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAHVQGCL
DEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLR
LQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPS
FVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCH
LDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNL
SHIAASLGKFFGTSVQVLNIGAIGLGSSGFRVLQDGVTKELKLVNINISKNRGGVETAKF
LSKLMPLAPELVEVNAGYNLMPLESLTIICSALKVAKGHLQRLDLTGNNWELQPSHVSML
SEFRHNGLPILILPTLQALDVPYDDEP

High Scoring Gene Products

Symbol, full name Information P value
AT2G20210 protein from Arabidopsis thaliana 4.8e-78
NLRP13
NACHT, LRR and PYD domains-containing protein 13
protein from Homo sapiens 0.00081

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  010572
        (507 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2039027 - symbol:AT2G20210 "AT2G20210" species...   785  4.8e-78   1
UNIPROTKB|Q86W25 - symbol:NLRP13 "NACHT, LRR and PYD doma...    89  0.00081   2


>TAIR|locus:2039027 [details] [associations]
            symbol:AT2G20210 "AT2G20210" species:3702 "Arabidopsis
            thaliana" [GO:0016114 "terpenoid biosynthetic process"
            evidence=RCA] EMBL:CP002685 IPI:IPI00531808 RefSeq:NP_179611.2
            UniGene:At.39728 ProteinModelPortal:F4IUG1 SMR:F4IUG1
            EnsemblPlants:AT2G20210.1 GeneID:816540 KEGG:ath:AT2G20210
            OMA:RWIRSEK Uniprot:F4IUG1
        Length = 604

 Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
 Identities = 195/482 (40%), Positives = 257/482 (53%)

Query:     1 MVKAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFR- 59
             M KAPSL  L   ++K +LL  D+ IP +YELP++L D ++  LP LALQK QT MPF  
Sbjct:     1 MTKAPSLAFLCIQSLKIQLLESDNPIPDLYELPSELLDGIVAHLPALALQKFQTNMPFHC 60

Query:    60 -DGDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIE-PVDWQQRYWEAHVQ 117
              D  + G  D C   GRKR R     + WK LFK RW  F D++E P DWQQ YWE H+Q
Sbjct:    61 LDSYESGD-DCCLITGRKRARNDVLGSSWKLLFKLRWPDFVDRVESPADWQQLYWEKHLQ 119

Query:   118 GCLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQ-MNHLACDYSKLSYHCQQFGHYA 176
              C+DEAAE+ + P+F G I  IN+SD IL YI +E+  M    C   +LS+H Q FG Y 
Sbjct:   120 NCVDEAAEVALRPTFSGRICSINVSDNILRYICHEEHIMTCQNCVCKELSFHFQTFGPYL 179

Query:   177 RCLRLQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCK 236
             RCLRL N LCV ET +LLR SKL+SLVLRWIR E+HV+ LCKLLIQ+ ETL SLE +HCK
Sbjct:   180 RCLRLLNVLCVTETSELLRTSKLRSLVLRWIRSEKHVEPLCKLLIQSRETLTSLELIHCK 239

Query:   237 LSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPXXXXXXXXXXXXXGRSLCSLKL 296
             LS S +  IC SL  K      ++   I  SS IE  P              R+L SL  
Sbjct:   240 LSLSSISAICTSLHEKGIHTTGMQRFCIKTSS-IEIDPLAAPSAFVSFLMSVRTLHSLHF 298

Query:   297 RHCHLDRDFGRMVFXXXXXXXXXXXXXXXXXXXIGGWLSKYDRSGPLFSLGAGKSLQSLR 356
                +LDR F RMVF                   I GWLS +     + SL +GKSLQSL 
Sbjct:   299 GDSNLDRYFARMVFSTLLDSSSNLSSLDLSENNISGWLSTFSCKSVVGSLSSGKSLQSLC 358

Query:   357 LLNLS------HIAASLGK--FFGTSVQVLNIGAIGLGSSGFRVLQDGVTK--ELKLVNI 406
              LNL       + A +L         ++ L++    +  SG R L    TK  + +L ++
Sbjct:   359 KLNLRGNELDRYDAENLAHALLHMPGLESLDLSGNPIEDSGIRSLISYFTKNPDSRLADL 418

Query:   407 NISK-NRGGVETAKFLSKLMPLAPELVEVNAGYNLMPLESLTIICSALKVAKGHLQRLDL 465
             N+           +FL  L  L   L  ++   N +  E    + ++  ++   ++ L++
Sbjct:   419 NLENCELSCCGVIEFLDTLSMLEKPLKFLSVADNALGSEVAEAVVNSFTIS---IESLNI 475

Query:   466 TG 467
              G
Sbjct:   476 MG 477

 Score = 382 (139.5 bits), Expect = 6.3e-35, P = 6.3e-35
 Identities = 77/149 (51%), Positives = 106/149 (71%)

Query:   361 SHIAASLGKFFGTSVQVLNIGAIGLGSSGFRVLQDGVTK-ELKLVNINISKNRGGVETAK 419
             S +A ++   F  S++ LNI  IGLG  GF  L   + K   KL++INISKNRGG+ETA+
Sbjct:   456 SEVAEAVVNSFTISIESLNIMGIGLGPLGFLALGRKLEKVSKKLLSINISKNRGGLETAR 515

Query:   420 FLSKLMPLAPELVEVNAGYNLMPLESLTIICSALKVAKGHLQRLDLTGNNW-ELQPSHVS 478
             FLSKL+PLAP+L+ ++A YNLMP E+L ++C +L+ AKG L+RLD+TGN+    +  H S
Sbjct:   516 FLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMTGNSCISHEADHSS 575

Query:   479 MLSEFRHNGLPILILPTLQALDVPYDDEP 507
             +L EF+HNG PI +LP+     VPYDD+P
Sbjct:   576 LLHEFQHNGEPIFVLPSSSVSHVPYDDDP 604


>UNIPROTKB|Q86W25 [details] [associations]
            symbol:NLRP13 "NACHT, LRR and PYD domains-containing
            protein 13" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
            evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
            InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
            InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
            EMBL:AY154468 EMBL:BK001108 IPI:IPI00249591 RefSeq:NP_789780.2
            UniGene:Hs.446924 ProteinModelPortal:Q86W25 SMR:Q86W25
            PhosphoSite:Q86W25 DMDM:145559500 PaxDb:Q86W25 PRIDE:Q86W25
            DNASU:126204 Ensembl:ENST00000342929 GeneID:126204 KEGG:hsa:126204
            UCSC:uc010ygg.2 CTD:126204 GeneCards:GC19M056407 H-InvDB:HIX0040054
            HGNC:HGNC:22937 MIM:609660 neXtProt:NX_Q86W25 PharmGKB:PA162397891
            eggNOG:NOG146595 InParanoid:Q86W25 OMA:ENLHELD OrthoDB:EOG40VVNS
            PhylomeDB:Q86W25 GenomeRNAi:126204 NextBio:81710 Bgee:Q86W25
            CleanEx:HS_NLRP13 Genevestigator:Q86W25 GermOnline:ENSG00000173572
            Uniprot:Q86W25
        Length = 1043

 Score = 89 (36.4 bits), Expect = 0.00081, Sum P(2) = 0.00081
 Identities = 30/115 (26%), Positives = 54/115 (46%)

Query:   151 YEQQMNHLACDYSKLSYHCQQFGHYARCLRLQ-NALCVEETCQLLRESKLQSLVLRWIRF 209
             +E  +N L  +  + S  C +       LRL  ++  +E   ++L  SK  S +  W   
Sbjct:   659 FEVDLNILEDEELQASSFCLKHCKRLNKLRLSVSSHILERDLEILETSKFDSRMHAW--- 715

Query:   210 EEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSI 264
                  ++C  L+ N E L  L+  + KL  S V+G+C +L + R ++ K+   S+
Sbjct:   716 ----NSICSTLVTN-ENLHELDLSNSKLHASSVKGLCLALKNPRCKVQKLTCKSV 765

 Score = 81 (33.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
 Identities = 27/118 (22%), Positives = 53/118 (44%)

Query:   351 SLQSLRLLNLSHIAASLGKFFGT-----SVQVLNIGAIGLGSSGFRVLQDGVTKELKLVN 405
             +LQSL L   S      G+         +V++L++G   L   G ++L + +     L  
Sbjct:   925 NLQSLNLSGCSFTREGCGELANALSHNHNVKILDLGENDLQDDGVKLLCEALKPHRALHT 984

Query:   406 INISKNRGGVETAKFLSKLMPLAPELVEVNAGYNLMPLESLTIICSALKVAKGHLQRL 463
             + ++K        + L  ++  +  LV +N   N +  + + ++C ALK +   LQ+L
Sbjct:   985 LGLAKCNLTTACCQHLFSVLSSSKSLVNLNLLGNELDTDGVKMLCKALKKSTCRLQKL 1042


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      507       475   0.00078  119 3  11 22  0.49    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  309 KB (2158 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  38.93u 0.21s 39.14t   Elapsed:  00:00:02
  Total cpu time:  38.93u 0.21s 39.14t   Elapsed:  00:00:02
  Start:  Fri May 10 17:20:40 2013   End:  Fri May 10 17:20:42 2013

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