Query 010573
Match_columns 507
No_of_seqs 335 out of 2743
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 02:06:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010573.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010573hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1335 Dihydrolipoamide dehyd 100.0 2.1E-88 4.5E-93 618.6 45.5 502 3-506 1-505 (506)
2 COG1249 Lpd Pyruvate/2-oxoglut 100.0 9.8E-86 2.1E-90 650.1 55.8 452 41-497 2-454 (454)
3 PRK06467 dihydrolipoamide dehy 100.0 2.7E-78 5.8E-83 615.9 59.7 462 41-505 2-463 (471)
4 PRK06115 dihydrolipoamide dehy 100.0 3.2E-78 6.9E-83 615.1 59.6 459 43-503 3-462 (466)
5 PRK07818 dihydrolipoamide dehy 100.0 1.2E-75 2.6E-80 597.9 60.5 460 42-505 3-464 (466)
6 PRK05249 soluble pyridine nucl 100.0 4.6E-75 1E-79 594.6 58.0 457 42-504 4-460 (461)
7 PRK06327 dihydrolipoamide dehy 100.0 1.2E-74 2.5E-79 591.0 59.9 461 41-504 2-472 (475)
8 PRK06416 dihydrolipoamide dehy 100.0 1.2E-74 2.6E-79 591.3 59.5 458 42-505 3-460 (462)
9 PLN02507 glutathione reductase 100.0 1.7E-74 3.7E-79 589.6 58.1 447 41-497 23-483 (499)
10 PRK05976 dihydrolipoamide dehy 100.0 5.5E-74 1.2E-78 586.6 60.6 457 40-501 1-466 (472)
11 PRK06370 mercuric reductase; V 100.0 3.5E-74 7.5E-79 587.1 58.5 454 40-502 2-458 (463)
12 TIGR01424 gluta_reduc_2 glutat 100.0 2.1E-74 4.4E-79 585.0 56.3 440 43-496 2-445 (446)
13 PRK07846 mycothione reductase; 100.0 1.8E-74 3.9E-79 584.0 55.5 444 43-500 1-449 (451)
14 PRK06116 glutathione reductase 100.0 2.4E-74 5.2E-79 586.7 56.0 441 41-496 2-449 (450)
15 PRK07845 flavoprotein disulfid 100.0 6E-74 1.3E-78 583.8 58.6 451 44-501 2-460 (466)
16 TIGR01423 trypano_reduc trypan 100.0 3.7E-74 8E-79 583.0 55.6 446 42-497 2-471 (486)
17 PTZ00153 lipoamide dehydrogena 100.0 4.4E-74 9.5E-79 594.0 57.0 459 41-503 114-656 (659)
18 TIGR01421 gluta_reduc_1 glutat 100.0 4.9E-74 1.1E-78 581.3 56.3 441 43-496 2-449 (450)
19 PRK06912 acoL dihydrolipoamide 100.0 1.7E-73 3.7E-78 580.3 58.2 454 45-506 2-457 (458)
20 PRK14727 putative mercuric red 100.0 1.2E-73 2.6E-78 583.5 57.2 450 41-500 14-467 (479)
21 PRK14694 putative mercuric red 100.0 1.5E-73 3.2E-78 582.3 57.2 450 40-500 3-456 (468)
22 PLN02546 glutathione reductase 100.0 1.2E-73 2.6E-78 584.7 55.1 442 41-497 77-532 (558)
23 TIGR03452 mycothione_red mycot 100.0 1.3E-73 2.8E-78 578.6 54.6 443 43-499 2-451 (452)
24 TIGR02053 MerA mercuric reduct 100.0 1.1E-72 2.4E-77 576.5 58.1 449 44-502 1-453 (463)
25 TIGR01438 TGR thioredoxin and 100.0 2E-72 4.4E-77 572.2 56.1 451 43-500 2-471 (484)
26 PRK06292 dihydrolipoamide dehy 100.0 2.5E-72 5.4E-77 574.3 56.8 453 42-506 2-459 (460)
27 PTZ00058 glutathione reductase 100.0 1.7E-72 3.6E-77 575.8 54.8 442 42-498 47-558 (561)
28 PRK13748 putative mercuric red 100.0 3.8E-72 8.3E-77 586.6 56.5 449 42-500 97-549 (561)
29 TIGR01350 lipoamide_DH dihydro 100.0 8.6E-71 1.9E-75 563.5 59.6 457 43-505 1-459 (461)
30 PRK08010 pyridine nucleotide-d 100.0 5.4E-71 1.2E-75 560.6 55.9 432 43-500 3-440 (441)
31 PTZ00052 thioredoxin reductase 100.0 2.6E-70 5.6E-75 559.4 53.2 446 42-496 4-477 (499)
32 PRK07251 pyridine nucleotide-d 100.0 2.1E-69 4.6E-74 548.4 56.5 429 43-497 3-436 (438)
33 KOG0405 Pyridine nucleotide-di 100.0 2.4E-70 5.2E-75 493.9 38.9 448 37-493 14-468 (478)
34 KOG4716 Thioredoxin reductase 100.0 5E-59 1.1E-63 418.9 33.0 452 40-496 16-487 (503)
35 PRK13512 coenzyme A disulfide 100.0 2.6E-57 5.7E-62 458.4 40.5 400 44-496 2-430 (438)
36 PRK09564 coenzyme A disulfide 100.0 3.3E-56 7.1E-61 454.0 40.7 407 45-499 2-439 (444)
37 TIGR03385 CoA_CoA_reduc CoA-di 100.0 5.8E-49 1.3E-53 398.2 37.7 344 141-496 52-423 (427)
38 PRK14989 nitrite reductase sub 100.0 1.5E-45 3.2E-50 393.6 36.9 384 44-489 4-413 (847)
39 PRK09754 phenylpropionate diox 100.0 1.8E-42 4E-47 346.5 34.9 362 43-476 3-385 (396)
40 PRK04965 NADH:flavorubredoxin 100.0 1.1E-39 2.4E-44 324.7 35.3 348 44-463 3-369 (377)
41 TIGR02374 nitri_red_nirB nitri 100.0 2.7E-40 5.9E-45 354.2 33.1 371 46-483 1-389 (785)
42 COG1252 Ndh NADH dehydrogenase 100.0 2.5E-39 5.3E-44 311.8 24.2 284 43-378 3-329 (405)
43 PTZ00318 NADH dehydrogenase-li 100.0 8.8E-38 1.9E-42 314.8 30.5 311 40-403 7-369 (424)
44 TIGR01292 TRX_reduct thioredox 100.0 2.1E-36 4.6E-41 293.0 30.5 290 44-377 1-297 (300)
45 TIGR03140 AhpF alkyl hydropero 100.0 9.9E-36 2.1E-40 306.5 29.3 292 41-378 210-510 (515)
46 TIGR03143 AhpF_homolog putativ 100.0 2.5E-35 5.5E-40 305.6 31.7 292 41-377 2-305 (555)
47 PRK10262 thioredoxin reductase 100.0 2.5E-35 5.4E-40 287.2 28.5 297 40-378 3-312 (321)
48 COG1251 NirB NAD(P)H-nitrite r 100.0 1.7E-35 3.7E-40 294.4 25.2 373 43-483 3-394 (793)
49 PRK15317 alkyl hydroperoxide r 100.0 9E-35 2E-39 299.8 31.5 292 41-378 209-509 (517)
50 COG0492 TrxB Thioredoxin reduc 100.0 8.9E-35 1.9E-39 274.6 28.7 288 42-378 2-298 (305)
51 TIGR01316 gltA glutamate synth 100.0 3.7E-35 8.1E-40 297.1 26.4 280 41-377 131-446 (449)
52 PRK12831 putative oxidoreducta 100.0 5.5E-35 1.2E-39 296.2 27.5 285 40-378 137-458 (464)
53 TIGR03169 Nterm_to_SelD pyridi 100.0 1.4E-34 3E-39 287.4 25.0 281 45-378 1-308 (364)
54 PRK09853 putative selenate red 100.0 6.1E-34 1.3E-38 301.8 29.4 283 41-380 537-841 (1019)
55 KOG1336 Monodehydroascorbate/f 100.0 1.9E-33 4.1E-38 268.0 27.3 367 43-481 74-464 (478)
56 PRK11749 dihydropyrimidine deh 100.0 5.5E-34 1.2E-38 290.3 25.3 283 40-378 137-449 (457)
57 TIGR03315 Se_ygfK putative sel 100.0 2.7E-33 6E-38 298.6 29.4 281 41-379 535-838 (1012)
58 PRK12770 putative glutamate sy 100.0 1.9E-32 4.1E-37 269.8 28.4 290 41-378 16-347 (352)
59 PRK12779 putative bifunctional 100.0 1.7E-32 3.8E-37 296.0 30.0 281 42-377 305-623 (944)
60 PRK12778 putative bifunctional 100.0 9.5E-33 2.1E-37 296.6 27.8 283 41-378 429-747 (752)
61 PRK12810 gltD glutamate syntha 100.0 3.7E-32 8E-37 277.2 27.3 287 41-378 141-462 (471)
62 PRK12814 putative NADPH-depend 100.0 1.5E-31 3.2E-36 281.7 28.2 279 42-377 192-497 (652)
63 PRK12769 putative oxidoreducta 100.0 1.1E-30 2.4E-35 276.5 28.4 281 42-378 326-649 (654)
64 PRK12775 putative trifunctiona 100.0 9.1E-31 2E-35 285.3 27.8 282 42-377 429-751 (1006)
65 TIGR01318 gltD_gamma_fam gluta 100.0 1.9E-30 4.1E-35 263.6 28.0 281 42-378 140-463 (467)
66 TIGR01317 GOGAT_sm_gam glutama 100.0 2.2E-29 4.8E-34 256.7 27.2 285 42-378 142-476 (485)
67 PRK12809 putative oxidoreducta 100.0 3.5E-29 7.6E-34 263.7 27.2 282 42-379 309-633 (639)
68 COG3634 AhpF Alkyl hydroperoxi 100.0 6E-30 1.3E-34 232.2 16.1 290 42-377 210-511 (520)
69 PRK13984 putative oxidoreducta 100.0 1.1E-28 2.3E-33 260.0 26.7 281 41-378 281-599 (604)
70 KOG2495 NADH-dehydrogenase (ub 100.0 1.7E-29 3.6E-34 236.3 16.8 292 40-377 52-393 (491)
71 PLN02852 ferredoxin-NADP+ redu 100.0 1.3E-27 2.9E-32 239.6 28.9 287 42-378 25-419 (491)
72 COG0446 HcaD Uncharacterized N 100.0 8.2E-27 1.8E-31 236.5 30.8 382 46-483 1-410 (415)
73 KOG0404 Thioredoxin reductase 100.0 8.2E-28 1.8E-32 205.4 17.4 288 43-375 8-313 (322)
74 TIGR01372 soxA sarcosine oxida 100.0 1.8E-26 3.8E-31 253.6 31.6 281 41-377 161-468 (985)
75 PRK12771 putative glutamate sy 100.0 8.7E-27 1.9E-31 243.1 26.2 280 41-377 135-440 (564)
76 KOG1346 Programmed cell death 100.0 1E-27 2.2E-32 222.5 14.0 324 145-482 269-651 (659)
77 PLN02172 flavin-containing mon 99.9 1.5E-24 3.2E-29 218.7 27.3 313 41-380 8-352 (461)
78 PF02852 Pyr_redox_dim: Pyridi 99.9 3.1E-24 6.8E-29 173.6 13.9 110 388-497 1-110 (110)
79 COG0493 GltD NADPH-dependent g 99.9 1.4E-22 3E-27 201.4 15.0 286 42-377 122-447 (457)
80 PF00743 FMO-like: Flavin-bind 99.9 6.3E-22 1.4E-26 202.1 19.1 309 44-380 2-396 (531)
81 PRK06567 putative bifunctional 99.8 1.3E-19 2.9E-24 190.5 23.6 287 40-377 380-766 (1028)
82 KOG0399 Glutamate synthase [Am 99.8 1.1E-20 2.5E-25 193.4 11.9 280 42-377 1784-2116(2142)
83 KOG2755 Oxidoreductase [Genera 99.8 1E-19 2.3E-24 159.8 15.9 264 45-357 1-321 (334)
84 PF13434 K_oxygenase: L-lysine 99.8 1.9E-19 4E-24 174.6 16.2 267 43-315 2-340 (341)
85 PF07992 Pyr_redox_2: Pyridine 99.8 7.1E-20 1.5E-24 166.3 12.5 187 45-359 1-200 (201)
86 COG3486 IucD Lysine/ornithine 99.8 1E-17 2.2E-22 157.5 23.7 329 40-379 2-413 (436)
87 PF13738 Pyr_redox_3: Pyridine 99.8 1.5E-18 3.1E-23 157.9 16.6 188 47-248 1-201 (203)
88 COG2072 TrkA Predicted flavopr 99.8 1.9E-18 4.2E-23 173.7 16.3 193 40-249 5-210 (443)
89 PRK05329 anaerobic glycerol-3- 99.8 5.5E-17 1.2E-21 160.8 24.0 158 217-379 218-419 (422)
90 COG1148 HdrA Heterodisulfide r 99.8 5.8E-17 1.3E-21 154.5 19.4 203 170-376 294-540 (622)
91 PTZ00188 adrenodoxin reductase 99.7 4.7E-16 1E-20 153.7 24.2 266 39-360 35-418 (506)
92 KOG1399 Flavin-containing mono 99.7 9.7E-17 2.1E-21 158.9 19.0 251 43-321 6-274 (448)
93 KOG1800 Ferredoxin/adrenodoxin 99.6 1E-14 2.3E-19 135.3 17.6 281 43-377 20-403 (468)
94 KOG3851 Sulfide:quinone oxidor 99.6 2.5E-15 5.4E-20 136.1 12.2 289 42-377 38-357 (446)
95 COG4529 Uncharacterized protei 99.6 5.4E-13 1.2E-17 129.6 28.4 203 43-247 1-231 (474)
96 PF00070 Pyr_redox: Pyridine n 99.5 5.5E-13 1.2E-17 101.0 11.8 78 216-293 1-78 (80)
97 PRK08401 L-aspartate oxidase; 99.4 8.4E-13 1.8E-17 134.8 13.2 144 43-189 1-176 (466)
98 COG2081 Predicted flavoprotein 99.4 9E-13 2E-17 124.9 11.9 140 42-186 2-165 (408)
99 TIGR00551 nadB L-aspartate oxi 99.4 1.3E-11 2.9E-16 126.9 16.3 145 43-188 2-189 (488)
100 PRK07843 3-ketosteroid-delta-1 99.4 2.1E-11 4.5E-16 127.1 17.9 108 210-319 156-273 (557)
101 COG0029 NadB Aspartate oxidase 99.4 1.6E-11 3.5E-16 119.2 15.4 314 45-379 9-396 (518)
102 PRK06263 sdhA succinate dehydr 99.3 1.5E-11 3.2E-16 128.2 15.0 48 332-379 347-402 (543)
103 PRK08275 putative oxidoreducta 99.3 2.9E-11 6.3E-16 126.2 17.0 147 42-188 8-200 (554)
104 PRK09897 hypothetical protein; 99.3 1.4E-10 3.1E-15 118.6 21.3 188 44-236 2-213 (534)
105 PRK06854 adenylylsulfate reduc 99.3 5.5E-10 1.2E-14 117.4 24.5 37 43-79 11-49 (608)
106 PRK12842 putative succinate de 99.3 6.1E-11 1.3E-15 124.4 17.3 244 41-318 7-277 (574)
107 PRK13800 putative oxidoreducta 99.3 6.4E-11 1.4E-15 130.1 17.9 66 312-377 337-406 (897)
108 PRK09231 fumarate reductase fl 99.3 5.9E-11 1.3E-15 124.2 16.6 41 43-83 4-46 (582)
109 TIGR03378 glycerol3P_GlpB glyc 99.3 2.2E-09 4.7E-14 105.5 26.1 121 255-377 263-419 (419)
110 PF03486 HI0933_like: HI0933-l 99.3 9.4E-12 2E-16 123.3 9.4 140 44-188 1-166 (409)
111 PRK09077 L-aspartate oxidase; 99.3 3.1E-10 6.8E-15 117.9 18.9 40 42-82 7-46 (536)
112 PRK06134 putative FAD-binding 99.2 9.6E-11 2.1E-15 122.9 14.9 244 41-318 10-280 (581)
113 PRK07395 L-aspartate oxidase; 99.2 2.6E-11 5.7E-16 125.8 10.4 41 41-82 7-47 (553)
114 PRK08071 L-aspartate oxidase; 99.2 1.6E-10 3.5E-15 119.2 15.4 40 43-83 3-42 (510)
115 PRK05945 sdhA succinate dehydr 99.2 9.6E-11 2.1E-15 122.8 14.0 39 43-81 3-43 (575)
116 TIGR01176 fum_red_Fp fumarate 99.2 1.5E-10 3.3E-15 120.8 15.3 40 43-82 3-44 (580)
117 PLN02815 L-aspartate oxidase 99.2 3.2E-10 6.9E-15 118.3 17.4 40 42-82 28-67 (594)
118 PRK06175 L-aspartate oxidase; 99.2 6.6E-11 1.4E-15 119.6 12.1 146 42-188 3-189 (433)
119 PRK08205 sdhA succinate dehydr 99.2 2.9E-10 6.3E-15 119.3 16.9 38 42-80 4-41 (583)
120 PRK06452 sdhA succinate dehydr 99.2 3E-10 6.6E-15 118.6 16.6 40 42-81 4-43 (566)
121 PRK06069 sdhA succinate dehydr 99.2 1.9E-10 4.2E-15 120.7 15.2 40 43-82 5-47 (577)
122 PRK07804 L-aspartate oxidase; 99.2 2.6E-10 5.7E-15 118.5 15.9 40 42-81 15-54 (541)
123 PLN00128 Succinate dehydrogena 99.2 2.5E-10 5.5E-15 120.1 15.4 40 42-81 49-88 (635)
124 PRK07573 sdhA succinate dehydr 99.2 2.6E-09 5.6E-14 112.9 22.6 38 42-79 34-71 (640)
125 TIGR01812 sdhA_frdA_Gneg succi 99.2 1.5E-10 3.2E-15 121.6 12.4 36 45-80 1-36 (566)
126 TIGR02061 aprA adenosine phosp 99.2 7.4E-09 1.6E-13 108.1 24.5 34 45-78 1-38 (614)
127 PRK08641 sdhA succinate dehydr 99.2 7E-10 1.5E-14 116.4 17.0 40 43-82 3-42 (589)
128 PRK07803 sdhA succinate dehydr 99.2 5.2E-10 1.1E-14 118.1 15.1 37 43-79 8-44 (626)
129 TIGR01811 sdhA_Bsu succinate d 99.1 5.6E-09 1.2E-13 109.7 21.0 33 46-78 1-33 (603)
130 PRK08626 fumarate reductase fl 99.1 1.3E-09 2.7E-14 115.4 16.3 38 43-80 5-42 (657)
131 PRK05192 tRNA uridine 5-carbox 99.1 7.2E-10 1.6E-14 113.5 12.4 140 42-187 3-156 (618)
132 COG3075 GlpB Anaerobic glycero 99.1 1.5E-08 3.2E-13 93.2 18.4 121 256-379 259-416 (421)
133 PRK07512 L-aspartate oxidase; 99.0 5E-09 1.1E-13 108.3 15.6 38 42-81 8-46 (513)
134 PRK04176 ribulose-1,5-biphosph 99.0 3.1E-09 6.8E-14 99.2 12.0 135 42-188 24-173 (257)
135 TIGR02028 ChlP geranylgeranyl 99.0 2E-09 4.2E-14 108.0 10.6 142 44-188 1-160 (398)
136 PRK12409 D-amino acid dehydrog 99.0 9.5E-08 2.1E-12 96.7 21.4 61 256-316 198-258 (410)
137 TIGR00292 thiazole biosynthesi 98.9 1.1E-08 2.5E-13 95.2 12.8 41 42-82 20-60 (254)
138 COG0644 FixC Dehydrogenases (f 98.9 7.1E-09 1.5E-13 104.0 11.2 145 42-188 2-152 (396)
139 PF00890 FAD_binding_2: FAD bi 98.9 8.3E-08 1.8E-12 97.3 17.9 64 254-317 140-204 (417)
140 PRK11728 hydroxyglutarate oxid 98.9 9.3E-08 2E-12 96.1 18.0 56 255-316 149-204 (393)
141 PF01266 DAO: FAD dependent ox 98.9 1.6E-07 3.4E-12 93.1 19.2 59 254-318 146-205 (358)
142 PRK08773 2-octaprenyl-3-methyl 98.9 9.7E-08 2.1E-12 96.0 17.2 58 256-318 114-171 (392)
143 TIGR01790 carotene-cycl lycope 98.9 1.6E-08 3.5E-13 101.5 11.3 136 45-188 1-141 (388)
144 PLN02463 lycopene beta cyclase 98.8 3E-08 6.6E-13 100.0 13.0 139 40-189 25-170 (447)
145 PRK12845 3-ketosteroid-delta-1 98.8 1.4E-07 3.1E-12 98.3 18.3 56 39-95 12-70 (564)
146 PRK06481 fumarate reductase fl 98.8 3.3E-08 7.2E-13 102.2 13.2 41 42-82 60-100 (506)
147 PLN00093 geranylgeranyl diphos 98.8 3.5E-08 7.5E-13 100.1 12.8 36 41-76 37-72 (450)
148 TIGR01377 soxA_mon sarcosine o 98.8 2.7E-07 5.8E-12 92.4 19.2 55 256-316 146-200 (380)
149 PRK08163 salicylate hydroxylas 98.8 1.5E-07 3.3E-12 94.8 17.2 57 257-318 111-168 (396)
150 PRK06847 hypothetical protein; 98.8 7.6E-08 1.6E-12 96.2 14.9 60 255-319 107-166 (375)
151 PLN02661 Putative thiazole syn 98.8 3.2E-08 7E-13 94.7 11.4 136 42-188 91-244 (357)
152 TIGR00275 flavoprotein, HI0933 98.8 8.7E-08 1.9E-12 96.1 15.1 57 254-316 104-160 (400)
153 PRK10157 putative oxidoreducta 98.8 6.7E-08 1.5E-12 97.9 14.1 39 42-80 4-42 (428)
154 COG1053 SdhA Succinate dehydro 98.8 6.9E-08 1.5E-12 99.5 13.9 39 41-79 4-42 (562)
155 PF12831 FAD_oxidored: FAD dep 98.8 6.6E-09 1.4E-13 105.1 5.9 138 45-186 1-148 (428)
156 PF01134 GIDA: Glucose inhibit 98.8 1.3E-08 2.8E-13 99.0 7.6 125 45-186 1-150 (392)
157 PRK08274 tricarballylate dehyd 98.8 3.1E-07 6.6E-12 94.5 18.2 60 255-315 131-191 (466)
158 PRK10015 oxidoreductase; Provi 98.8 1.4E-07 3E-12 95.5 15.3 38 42-79 4-41 (429)
159 TIGR00136 gidA glucose-inhibit 98.8 3.8E-08 8.2E-13 100.8 11.0 140 44-188 1-154 (617)
160 TIGR01292 TRX_reduct thioredox 98.8 1E-07 2.2E-12 92.1 13.5 99 216-320 2-116 (300)
161 PRK06184 hypothetical protein; 98.8 3E-07 6.6E-12 95.4 17.9 59 257-317 111-169 (502)
162 COG2081 Predicted flavoprotein 98.8 1E-07 2.3E-12 90.9 12.5 99 215-318 4-171 (408)
163 TIGR02032 GG-red-SF geranylger 98.8 1.1E-07 2.4E-12 91.5 13.1 37 44-80 1-37 (295)
164 TIGR02023 BchP-ChlP geranylger 98.7 6E-08 1.3E-12 97.2 11.5 32 44-75 1-32 (388)
165 PRK06834 hypothetical protein; 98.7 7.5E-08 1.6E-12 99.0 12.3 144 43-188 3-156 (488)
166 PRK11259 solA N-methyltryptoph 98.7 5.3E-07 1.1E-11 90.2 18.1 56 255-316 149-204 (376)
167 PRK05714 2-octaprenyl-3-methyl 98.7 3E-07 6.4E-12 92.9 16.2 58 256-318 113-170 (405)
168 PRK09126 hypothetical protein; 98.7 3.9E-07 8.5E-12 91.6 16.4 49 266-319 122-170 (392)
169 PRK07333 2-octaprenyl-6-methox 98.7 5.3E-07 1.2E-11 91.0 16.7 58 256-318 112-169 (403)
170 PRK13977 myosin-cross-reactive 98.7 2.6E-07 5.6E-12 94.0 14.1 97 223-319 191-296 (576)
171 COG0579 Predicted dehydrogenas 98.7 2.8E-07 6E-12 90.9 13.8 57 256-316 154-211 (429)
172 PRK08013 oxidoreductase; Provi 98.7 5.4E-07 1.2E-11 90.8 16.4 58 256-318 112-170 (400)
173 PRK00711 D-amino acid dehydrog 98.7 1.3E-06 2.8E-11 88.6 19.1 55 256-316 202-257 (416)
174 PRK07364 2-octaprenyl-6-methox 98.7 3E-07 6.4E-12 93.3 14.3 60 257-318 123-183 (415)
175 PRK08132 FAD-dependent oxidore 98.7 8E-07 1.7E-11 93.3 17.9 61 256-318 126-187 (547)
176 PF13454 NAD_binding_9: FAD-NA 98.7 2.3E-07 5E-12 80.0 11.4 131 47-186 1-155 (156)
177 PRK12266 glpD glycerol-3-phosp 98.7 6.1E-07 1.3E-11 92.9 16.4 62 255-316 155-216 (508)
178 PLN02697 lycopene epsilon cycl 98.7 1.8E-07 3.9E-12 96.0 12.2 139 41-188 106-248 (529)
179 PTZ00139 Succinate dehydrogena 98.7 2E-07 4.2E-12 98.4 12.8 147 42-188 28-229 (617)
180 PRK06183 mhpA 3-(3-hydroxyphen 98.7 1.3E-06 2.8E-11 91.5 18.8 62 256-318 114-176 (538)
181 PF13450 NAD_binding_8: NAD(P) 98.7 3.1E-08 6.7E-13 71.8 4.6 37 48-84 1-37 (68)
182 PRK07121 hypothetical protein; 98.7 7.7E-07 1.7E-11 92.1 16.8 45 42-86 19-63 (492)
183 PRK09078 sdhA succinate dehydr 98.6 2.6E-07 5.6E-12 97.4 12.9 40 42-81 11-50 (598)
184 PRK13369 glycerol-3-phosphate 98.6 3.8E-06 8.2E-11 87.1 21.4 62 254-316 154-215 (502)
185 PRK08849 2-octaprenyl-3-methyl 98.6 8E-07 1.7E-11 89.0 16.0 56 259-319 114-170 (384)
186 COG1635 THI4 Ribulose 1,5-bisp 98.6 4E-08 8.6E-13 85.5 5.5 45 43-87 30-74 (262)
187 PRK11101 glpA sn-glycerol-3-ph 98.6 2.8E-06 6.1E-11 88.7 20.4 62 255-316 149-211 (546)
188 COG0654 UbiH 2-polyprenyl-6-me 98.6 4.2E-07 9.2E-12 91.0 13.8 59 256-318 105-164 (387)
189 TIGR03329 Phn_aa_oxid putative 98.6 1.7E-06 3.6E-11 88.8 18.0 54 255-315 183-236 (460)
190 PRK08850 2-octaprenyl-6-methox 98.6 1.2E-06 2.7E-11 88.3 16.9 56 258-318 114-170 (405)
191 PRK06126 hypothetical protein; 98.6 1.5E-06 3.3E-11 91.2 17.9 61 257-317 128-189 (545)
192 PRK07190 hypothetical protein; 98.6 7.5E-07 1.6E-11 91.5 15.0 139 43-188 5-165 (487)
193 PF05834 Lycopene_cycl: Lycope 98.6 9.3E-08 2E-12 95.1 8.1 136 45-189 1-143 (374)
194 PF01946 Thi4: Thi4 family; PD 98.6 2.2E-08 4.8E-13 87.7 2.9 45 42-86 16-60 (230)
195 PRK07494 2-octaprenyl-6-methox 98.6 2.8E-07 6.1E-12 92.5 11.3 37 42-78 6-42 (388)
196 PRK07608 ubiquinone biosynthes 98.6 1.3E-06 2.8E-11 87.7 16.1 57 256-318 112-169 (388)
197 PRK08020 ubiF 2-octaprenyl-3-m 98.6 1.2E-06 2.6E-11 88.1 15.7 57 257-318 114-171 (391)
198 PRK07588 hypothetical protein; 98.6 1.1E-06 2.3E-11 88.4 15.4 57 257-319 105-161 (391)
199 PRK08958 sdhA succinate dehydr 98.6 5.6E-07 1.2E-11 94.6 13.7 147 42-188 6-206 (588)
200 TIGR01813 flavo_cyto_c flavocy 98.6 2.8E-07 6.1E-12 94.0 11.3 40 45-84 1-41 (439)
201 PRK12844 3-ketosteroid-delta-1 98.6 1.2E-06 2.5E-11 91.7 15.9 45 42-86 5-49 (557)
202 PRK12839 hypothetical protein; 98.6 3.6E-06 7.9E-11 88.1 19.2 54 40-93 5-61 (572)
203 TIGR01988 Ubi-OHases Ubiquinon 98.6 1.8E-06 3.8E-11 86.7 16.1 58 256-318 107-165 (385)
204 PRK12834 putative FAD-binding 98.6 5.5E-07 1.2E-11 94.2 12.8 43 41-83 2-46 (549)
205 PRK11445 putative oxidoreducta 98.6 7.6E-07 1.6E-11 88.0 13.0 35 43-78 1-35 (351)
206 PRK05257 malate:quinone oxidor 98.6 3.7E-06 8.1E-11 86.2 18.2 62 255-316 183-246 (494)
207 PRK06617 2-octaprenyl-6-methox 98.6 1.5E-06 3.3E-11 86.6 15.1 57 256-318 105-162 (374)
208 TIGR01320 mal_quin_oxido malat 98.5 6.7E-06 1.4E-10 84.3 19.7 62 255-316 178-240 (483)
209 PRK07538 hypothetical protein; 98.5 2.5E-06 5.3E-11 86.4 16.4 62 257-318 104-167 (413)
210 PRK07057 sdhA succinate dehydr 98.5 1E-06 2.2E-11 92.7 13.8 62 255-316 148-211 (591)
211 PTZ00383 malate:quinone oxidor 98.5 6.6E-06 1.4E-10 84.1 18.9 55 256-316 212-273 (497)
212 TIGR01350 lipoamide_DH dihydro 98.5 2.6E-06 5.7E-11 87.6 16.2 98 43-189 170-270 (461)
213 PRK08244 hypothetical protein; 98.5 6.2E-07 1.3E-11 92.9 11.0 36 43-78 2-37 (493)
214 PRK13339 malate:quinone oxidor 98.5 4.5E-06 9.8E-11 85.0 16.5 62 256-317 185-248 (497)
215 COG1231 Monoamine oxidase [Ami 98.5 8.6E-07 1.9E-11 86.2 10.2 44 41-84 5-48 (450)
216 PTZ00306 NADH-dependent fumara 98.5 2E-06 4.2E-11 97.3 14.1 43 41-83 407-449 (1167)
217 PRK06475 salicylate hydroxylas 98.5 4.8E-06 1E-10 83.9 15.6 61 256-318 108-169 (400)
218 PTZ00363 rab-GDP dissociation 98.4 9.5E-07 2.1E-11 88.9 10.1 45 40-84 1-45 (443)
219 PF13738 Pyr_redox_3: Pyridine 98.4 9.6E-07 2.1E-11 80.0 9.3 97 218-319 1-143 (203)
220 PLN02172 flavin-containing mon 98.4 6.7E-06 1.5E-10 83.7 16.3 106 214-320 10-179 (461)
221 PRK05976 dihydrolipoamide dehy 98.4 3.4E-06 7.4E-11 86.8 14.3 99 43-190 180-283 (472)
222 PRK01747 mnmC bifunctional tRN 98.4 4.4E-06 9.6E-11 89.6 15.6 57 255-317 408-464 (662)
223 PF03486 HI0933_like: HI0933-l 98.4 9.3E-07 2E-11 88.0 9.6 96 216-316 2-166 (409)
224 PRK08243 4-hydroxybenzoate 3-m 98.4 1E-06 2.2E-11 88.5 10.0 35 43-77 2-36 (392)
225 TIGR01373 soxB sarcosine oxida 98.4 1.3E-05 2.9E-10 81.0 18.1 35 42-76 29-65 (407)
226 PF01494 FAD_binding_3: FAD bi 98.4 2.9E-07 6.2E-12 91.1 5.8 35 44-78 2-36 (356)
227 PRK12837 3-ketosteroid-delta-1 98.4 7.2E-06 1.6E-10 85.1 16.3 42 42-84 6-47 (513)
228 PRK07251 pyridine nucleotide-d 98.4 7.3E-06 1.6E-10 83.6 16.1 95 43-189 157-254 (438)
229 KOG2415 Electron transfer flav 98.4 4.8E-07 1E-11 85.9 6.7 49 41-89 74-128 (621)
230 PRK07236 hypothetical protein; 98.4 1E-06 2.2E-11 88.4 9.6 37 41-77 4-40 (386)
231 PLN02464 glycerol-3-phosphate 98.4 7E-06 1.5E-10 86.8 16.2 63 254-316 231-296 (627)
232 TIGR03364 HpnW_proposed FAD de 98.4 9.3E-06 2E-10 80.8 16.3 34 44-77 1-34 (365)
233 PRK05732 2-octaprenyl-6-methox 98.4 1.2E-06 2.6E-11 88.2 9.9 34 42-75 2-38 (395)
234 TIGR01789 lycopene_cycl lycope 98.4 7.3E-07 1.6E-11 88.4 8.0 37 45-81 1-39 (370)
235 PF01494 FAD_binding_3: FAD bi 98.4 5.8E-06 1.3E-10 81.8 14.5 103 216-318 3-174 (356)
236 TIGR02360 pbenz_hydroxyl 4-hyd 98.4 1.6E-06 3.5E-11 86.9 10.5 35 43-77 2-36 (390)
237 PRK12835 3-ketosteroid-delta-1 98.4 8.9E-06 1.9E-10 85.5 16.1 41 42-82 10-50 (584)
238 TIGR00292 thiazole biosynthesi 98.4 1.2E-05 2.6E-10 75.0 14.8 165 214-378 21-251 (254)
239 TIGR03140 AhpF alkyl hydropero 98.4 5.2E-06 1.1E-10 86.2 13.7 102 213-319 211-326 (515)
240 PRK15317 alkyl hydroperoxide r 98.4 4.5E-06 9.8E-11 86.8 13.2 101 214-319 211-325 (517)
241 COG0578 GlpA Glycerol-3-phosph 98.4 2.3E-06 4.9E-11 86.3 10.4 63 254-316 163-225 (532)
242 COG1233 Phytoene dehydrogenase 98.4 4.8E-07 1E-11 93.1 5.6 43 42-84 2-44 (487)
243 COG0445 GidA Flavin-dependent 98.3 5.2E-07 1.1E-11 89.1 5.4 137 42-187 3-157 (621)
244 TIGR01984 UbiH 2-polyprenyl-6- 98.3 1.7E-06 3.7E-11 86.7 9.3 33 45-77 1-34 (382)
245 PRK06185 hypothetical protein; 98.3 2.1E-06 4.5E-11 86.9 9.8 38 40-77 3-40 (407)
246 PRK09564 coenzyme A disulfide 98.3 3.2E-06 7E-11 86.5 11.2 102 215-320 1-119 (444)
247 PRK12843 putative FAD-binding 98.3 8.2E-05 1.8E-09 78.4 21.2 44 43-86 16-59 (578)
248 PRK07045 putative monooxygenas 98.3 1.8E-06 3.8E-11 86.8 8.4 37 42-78 4-40 (388)
249 PRK04176 ribulose-1,5-biphosph 98.3 2.5E-05 5.3E-10 73.1 15.4 165 214-379 25-253 (257)
250 PRK09754 phenylpropionate diox 98.3 4E-06 8.7E-11 84.3 10.8 98 214-318 3-114 (396)
251 PF00070 Pyr_redox: Pyridine n 98.3 1.1E-05 2.4E-10 60.8 10.3 34 45-78 1-34 (80)
252 COG1232 HemY Protoporphyrinoge 98.3 6.1E-06 1.3E-10 82.1 11.2 39 45-83 2-42 (444)
253 KOG0029 Amine oxidase [Seconda 98.3 1E-06 2.2E-11 89.6 5.8 44 40-83 12-55 (501)
254 PRK06753 hypothetical protein; 98.3 3.1E-06 6.7E-11 84.5 9.2 35 44-78 1-35 (373)
255 PLN02985 squalene monooxygenas 98.3 5.5E-06 1.2E-10 85.6 11.1 36 41-76 41-76 (514)
256 PRK06327 dihydrolipoamide dehy 98.3 1.8E-05 3.9E-10 81.5 14.9 98 43-189 183-285 (475)
257 PRK07208 hypothetical protein; 98.3 1.1E-06 2.5E-11 90.8 6.0 45 40-84 1-45 (479)
258 TIGR00031 UDP-GALP_mutase UDP- 98.2 1.3E-06 2.8E-11 85.9 5.6 43 43-85 1-43 (377)
259 TIGR00137 gid_trmFO tRNA:m(5)U 98.2 2.9E-06 6.3E-11 84.1 7.8 36 44-79 1-36 (433)
260 PRK05868 hypothetical protein; 98.2 6.6E-06 1.4E-10 81.9 10.4 35 44-78 2-36 (372)
261 PRK13512 coenzyme A disulfide 98.2 1.1E-05 2.4E-10 82.2 12.1 104 215-320 2-121 (438)
262 PRK07236 hypothetical protein; 98.2 9.1E-06 2E-10 81.5 11.4 100 214-318 6-156 (386)
263 COG0665 DadA Glycine/D-amino a 98.2 3.1E-05 6.7E-10 77.8 15.2 38 42-79 3-40 (387)
264 COG2907 Predicted NAD/FAD-bind 98.2 5.5E-06 1.2E-10 77.2 8.8 43 40-83 5-47 (447)
265 TIGR02032 GG-red-SF geranylger 98.2 1.7E-05 3.7E-10 76.2 12.5 98 216-317 2-149 (295)
266 PRK06996 hypothetical protein; 98.2 5.8E-06 1.3E-10 83.3 9.3 35 42-76 10-48 (398)
267 PRK06834 hypothetical protein; 98.2 2.5E-05 5.3E-10 80.5 13.8 99 215-318 4-158 (488)
268 PLN02529 lysine-specific histo 98.2 2.7E-06 5.8E-11 90.3 6.5 46 38-83 155-200 (738)
269 PF07992 Pyr_redox_2: Pyridine 98.2 3.8E-06 8.2E-11 75.9 6.5 105 216-320 1-126 (201)
270 PRK05335 tRNA (uracil-5-)-meth 98.2 5.3E-06 1.2E-10 81.7 7.8 35 44-78 3-37 (436)
271 TIGR03219 salicylate_mono sali 98.2 7.8E-06 1.7E-10 82.8 9.3 35 45-79 2-37 (414)
272 TIGR01989 COQ6 Ubiquinone bios 98.1 6.5E-06 1.4E-10 83.9 8.6 33 44-76 1-37 (437)
273 PRK06912 acoL dihydrolipoamide 98.1 2.2E-05 4.8E-10 80.5 12.4 97 43-189 170-269 (458)
274 KOG2820 FAD-dependent oxidored 98.1 2.5E-05 5.4E-10 72.8 11.3 37 40-76 4-40 (399)
275 PF06039 Mqo: Malate:quinone o 98.1 5.2E-05 1.1E-09 74.4 14.0 97 256-355 182-290 (488)
276 TIGR03385 CoA_CoA_reduc CoA-di 98.1 2.2E-05 4.8E-10 79.9 12.2 97 43-189 137-234 (427)
277 COG2509 Uncharacterized FAD-de 98.1 2.6E-05 5.7E-10 75.7 11.7 82 233-319 150-233 (486)
278 COG1249 Lpd Pyruvate/2-oxoglut 98.1 4.8E-05 1E-09 76.6 14.0 99 42-189 172-273 (454)
279 PTZ00318 NADH dehydrogenase-li 98.1 1.6E-05 3.4E-10 80.7 10.7 106 214-320 10-129 (424)
280 PRK08294 phenol 2-monooxygenas 98.1 3E-05 6.5E-10 82.3 13.1 38 40-77 29-67 (634)
281 COG0562 Glf UDP-galactopyranos 98.1 3.6E-06 7.8E-11 77.7 5.2 43 43-85 1-43 (374)
282 PRK08244 hypothetical protein; 98.1 4.1E-05 9E-10 79.4 13.8 102 215-318 3-161 (493)
283 PTZ00367 squalene epoxidase; P 98.1 7E-06 1.5E-10 85.4 7.9 35 42-76 32-66 (567)
284 PRK04965 NADH:flavorubredoxin 98.1 3.3E-05 7.1E-10 77.2 12.5 97 43-189 141-240 (377)
285 PLN02576 protoporphyrinogen ox 98.1 4E-06 8.6E-11 87.1 5.8 44 41-84 10-54 (496)
286 TIGR02485 CobZ_N-term precorri 98.1 2.1E-05 4.5E-10 80.1 10.9 35 48-82 1-37 (432)
287 TIGR03169 Nterm_to_SelD pyridi 98.1 1.6E-05 3.4E-10 79.1 9.8 97 216-320 1-111 (364)
288 PRK11883 protoporphyrinogen ox 98.1 3.8E-06 8.3E-11 86.2 5.4 41 44-84 1-43 (451)
289 TIGR00562 proto_IX_ox protopor 98.1 4.3E-06 9.4E-11 86.0 5.5 41 44-84 3-47 (462)
290 PRK06416 dihydrolipoamide dehy 98.1 4.2E-05 9.1E-10 78.7 12.7 98 43-189 172-273 (462)
291 PRK05249 soluble pyridine nucl 98.1 5E-05 1.1E-09 78.1 13.2 96 43-189 175-273 (461)
292 PLN02268 probable polyamine ox 98.0 5E-06 1.1E-10 84.8 5.5 40 45-84 2-41 (435)
293 COG3349 Uncharacterized conser 98.0 5E-06 1.1E-10 82.5 5.2 43 44-86 1-43 (485)
294 PRK12770 putative glutamate sy 98.0 2.2E-05 4.7E-10 77.6 9.8 105 211-318 15-133 (352)
295 PRK07818 dihydrolipoamide dehy 98.0 4.9E-05 1.1E-09 78.2 12.7 98 43-189 172-274 (466)
296 TIGR02733 desat_CrtD C-3',4' d 98.0 5E-06 1.1E-10 86.2 5.4 42 44-85 2-43 (492)
297 PRK07233 hypothetical protein; 98.0 5E-06 1.1E-10 84.8 5.4 56 255-315 198-253 (434)
298 TIGR02730 carot_isom carotene 98.0 5.3E-06 1.1E-10 86.0 5.5 41 44-84 1-41 (493)
299 PRK12779 putative bifunctional 98.0 2.1E-05 4.6E-10 86.6 10.2 93 213-318 305-407 (944)
300 PRK10262 thioredoxin reductase 98.0 8.3E-05 1.8E-09 72.5 13.4 100 213-319 5-120 (321)
301 COG3380 Predicted NAD/FAD-depe 98.0 6.7E-06 1.5E-10 74.1 5.1 40 44-83 2-41 (331)
302 PRK14989 nitrite reductase sub 98.0 2.7E-05 5.9E-10 84.9 10.8 99 215-320 4-117 (847)
303 COG1252 Ndh NADH dehydrogenase 98.0 2.5E-05 5.5E-10 76.6 9.4 100 214-321 3-116 (405)
304 COG0446 HcaD Uncharacterized N 98.0 4E-05 8.6E-10 77.6 11.2 97 43-189 136-238 (415)
305 TIGR01424 gluta_reduc_2 glutat 98.0 7E-05 1.5E-09 76.5 12.9 96 43-189 166-264 (446)
306 PRK05868 hypothetical protein; 98.0 6.8E-05 1.5E-09 74.7 12.5 100 215-319 2-163 (372)
307 PRK06370 mercuric reductase; V 98.0 7.3E-05 1.6E-09 76.9 13.0 99 43-190 171-273 (463)
308 TIGR02053 MerA mercuric reduct 98.0 6.6E-05 1.4E-09 77.2 12.6 99 43-190 166-268 (463)
309 PLN02463 lycopene beta cyclase 98.0 7.7E-05 1.7E-09 75.6 12.8 97 215-317 29-170 (447)
310 PRK07845 flavoprotein disulfid 98.0 8.7E-05 1.9E-09 76.2 13.0 96 44-190 178-276 (466)
311 TIGR02734 crtI_fam phytoene de 98.0 6.6E-06 1.4E-10 85.6 4.8 57 255-316 219-276 (502)
312 PF01134 GIDA: Glucose inhibit 98.0 9.8E-05 2.1E-09 72.2 12.5 93 216-314 1-150 (392)
313 PRK09853 putative selenate red 98.0 4.3E-05 9.2E-10 83.3 10.9 91 213-318 538-637 (1019)
314 PRK06116 glutathione reductase 98.0 7.3E-05 1.6E-09 76.6 12.2 96 43-189 167-266 (450)
315 PLN02568 polyamine oxidase 98.0 1E-05 2.2E-10 83.9 5.9 43 42-84 4-51 (539)
316 TIGR03143 AhpF_homolog putativ 98.0 0.0001 2.2E-09 77.4 13.3 99 215-320 5-118 (555)
317 TIGR01316 gltA glutamate synth 98.0 2.2E-05 4.8E-10 80.1 8.1 92 213-318 132-233 (449)
318 KOG2495 NADH-dehydrogenase (ub 97.9 8.7E-05 1.9E-09 71.4 11.2 98 44-190 219-331 (491)
319 PF04820 Trp_halogenase: Trypt 97.9 4E-05 8.8E-10 78.0 9.6 55 135-191 156-214 (454)
320 PRK12416 protoporphyrinogen ox 97.9 1E-05 2.2E-10 83.3 5.3 41 44-84 2-48 (463)
321 PRK07190 hypothetical protein; 97.9 0.00012 2.7E-09 75.3 13.2 98 215-317 6-166 (487)
322 TIGR01984 UbiH 2-polyprenyl-6- 97.9 0.00012 2.5E-09 73.5 12.8 97 216-317 1-163 (382)
323 TIGR02374 nitri_red_nirB nitri 97.9 3.8E-05 8.3E-10 83.7 9.9 97 217-320 1-112 (785)
324 PLN02507 glutathione reductase 97.9 0.00012 2.6E-09 75.7 13.1 96 43-189 203-301 (499)
325 PRK11749 dihydropyrimidine deh 97.9 2.7E-05 5.8E-10 79.9 8.3 90 212-315 138-236 (457)
326 PF00743 FMO-like: Flavin-bind 97.9 0.0001 2.2E-09 76.3 12.3 138 214-356 1-193 (531)
327 PRK06115 dihydrolipoamide dehy 97.9 0.00013 2.9E-09 74.8 13.0 98 43-189 174-277 (466)
328 PRK05675 sdhA succinate dehydr 97.9 8.1E-05 1.7E-09 78.2 11.5 46 333-378 339-403 (570)
329 TIGR02731 phytoene_desat phyto 97.9 1.2E-05 2.6E-10 82.5 5.3 39 45-83 1-39 (453)
330 PRK10157 putative oxidoreducta 97.9 0.00019 4.2E-09 72.8 13.9 97 215-316 6-164 (428)
331 TIGR01421 gluta_reduc_1 glutat 97.9 0.00013 2.8E-09 74.6 12.6 98 43-190 166-267 (450)
332 PLN02328 lysine-specific histo 97.9 1.8E-05 3.9E-10 84.5 6.2 44 40-83 235-278 (808)
333 TIGR01318 gltD_gamma_fam gluta 97.9 4E-05 8.6E-10 78.6 8.6 92 213-318 140-240 (467)
334 KOG2614 Kynurenine 3-monooxyge 97.9 0.00015 3.2E-09 70.0 11.6 36 43-78 2-37 (420)
335 PLN02661 Putative thiazole syn 97.9 0.00084 1.8E-08 64.8 16.7 166 214-379 92-326 (357)
336 PRK06753 hypothetical protein; 97.9 0.00012 2.7E-09 73.0 11.7 98 216-318 2-154 (373)
337 PRK07846 mycothione reductase; 97.9 0.00016 3.4E-09 74.0 12.5 95 43-189 166-263 (451)
338 COG0492 TrxB Thioredoxin reduc 97.9 0.00058 1.3E-08 65.3 15.5 99 215-320 4-119 (305)
339 KOG2311 NAD/FAD-utilizing prot 97.9 4.4E-05 9.5E-10 74.2 7.6 36 40-75 25-60 (679)
340 PLN02676 polyamine oxidase 97.9 1.9E-05 4.1E-10 81.2 5.6 43 42-84 25-68 (487)
341 PRK06292 dihydrolipoamide dehy 97.9 0.00019 4.1E-09 73.8 13.1 98 43-190 169-270 (460)
342 COG1635 THI4 Ribulose 1,5-bisp 97.8 0.00035 7.6E-09 61.4 12.0 165 214-378 30-257 (262)
343 PRK14694 putative mercuric red 97.8 0.00014 3.1E-09 74.8 11.3 94 43-189 178-274 (468)
344 TIGR03452 mycothione_red mycot 97.8 0.00023 4.9E-09 72.8 12.7 95 43-189 169-266 (452)
345 PLN02852 ferredoxin-NADP+ redu 97.8 6.2E-05 1.3E-09 76.6 8.4 91 213-317 25-127 (491)
346 KOG2665 Predicted FAD-dependen 97.8 0.00027 5.9E-09 65.3 11.6 40 40-79 45-86 (453)
347 KOG2404 Fumarate reductase, fl 97.8 0.00027 5.8E-09 65.5 11.5 79 237-317 122-207 (477)
348 PRK08255 salicylyl-CoA 5-hydro 97.8 8.2E-05 1.8E-09 80.9 9.9 34 44-77 1-36 (765)
349 PRK06467 dihydrolipoamide dehy 97.8 0.00023 5E-09 73.2 12.7 96 44-189 175-275 (471)
350 PRK08243 4-hydroxybenzoate 3-m 97.8 0.00034 7.3E-09 70.4 13.6 103 215-319 3-166 (392)
351 KOG1399 Flavin-containing mono 97.8 0.00052 1.1E-08 68.9 14.6 142 213-358 5-198 (448)
352 TIGR01438 TGR thioredoxin and 97.8 0.00024 5.2E-09 73.2 12.6 96 44-189 181-280 (484)
353 TIGR01423 trypano_reduc trypan 97.8 0.00021 4.6E-09 73.4 12.1 96 43-189 187-289 (486)
354 PRK12831 putative oxidoreducta 97.8 7E-05 1.5E-09 76.6 8.5 95 212-318 138-243 (464)
355 KOG1336 Monodehydroascorbate/f 97.8 0.00021 4.6E-09 70.0 11.3 97 43-189 213-314 (478)
356 PTZ00052 thioredoxin reductase 97.8 0.00023 4.9E-09 73.7 12.1 94 44-189 183-279 (499)
357 TIGR01317 GOGAT_sm_gam glutama 97.8 7.6E-05 1.7E-09 76.8 8.5 91 213-317 142-242 (485)
358 PRK08010 pyridine nucleotide-d 97.8 0.00035 7.6E-09 71.4 13.2 95 43-189 158-255 (441)
359 PTZ00188 adrenodoxin reductase 97.8 0.00013 2.8E-09 73.3 9.5 92 212-317 37-139 (506)
360 PTZ00058 glutathione reductase 97.8 0.00034 7.4E-09 72.9 13.0 97 43-189 237-337 (561)
361 PRK14727 putative mercuric red 97.8 0.00036 7.7E-09 72.0 13.1 93 44-189 189-284 (479)
362 PRK09897 hypothetical protein; 97.7 0.00045 9.8E-09 71.3 13.6 99 215-317 2-167 (534)
363 PRK07045 putative monooxygenas 97.7 0.00038 8.3E-09 69.8 12.7 99 215-318 6-167 (388)
364 TIGR02023 BchP-ChlP geranylger 97.7 0.00058 1.3E-08 68.5 13.9 102 216-318 2-157 (388)
365 PRK07494 2-octaprenyl-6-methox 97.7 0.00038 8.2E-09 69.9 12.4 98 215-318 8-169 (388)
366 PRK12775 putative trifunctiona 97.7 9.3E-05 2E-09 82.4 8.4 93 214-318 430-532 (1006)
367 PLN02697 lycopene epsilon cycl 97.7 0.0005 1.1E-08 71.0 13.0 97 215-316 109-248 (529)
368 TIGR02732 zeta_caro_desat caro 97.7 4.5E-05 9.7E-10 78.3 5.4 40 45-84 1-40 (474)
369 PRK12778 putative bifunctional 97.7 0.00012 2.5E-09 79.9 8.5 93 213-318 430-532 (752)
370 PRK06996 hypothetical protein; 97.7 0.00053 1.2E-08 69.0 12.6 100 214-315 11-173 (398)
371 PLN02612 phytoene desaturase 97.7 6.9E-05 1.5E-09 78.6 6.4 44 40-83 90-133 (567)
372 PRK13748 putative mercuric red 97.7 0.00047 1E-08 72.8 12.7 95 43-190 270-367 (561)
373 PRK12810 gltD glutamate syntha 97.7 0.00015 3.2E-09 74.6 8.5 90 213-316 142-240 (471)
374 TIGR01790 carotene-cycl lycope 97.7 0.00058 1.2E-08 68.6 12.6 95 216-316 1-141 (388)
375 PLN02487 zeta-carotene desatur 97.6 8E-05 1.7E-09 77.5 6.3 42 42-83 74-115 (569)
376 KOG0399 Glutamate synthase [Am 97.6 0.001 2.2E-08 71.2 14.1 92 214-319 1785-1885(2142)
377 COG0644 FixC Dehydrogenases (f 97.6 0.0008 1.7E-08 67.6 13.2 98 216-317 5-153 (396)
378 PLN02546 glutathione reductase 97.6 0.0007 1.5E-08 70.6 13.1 97 43-190 252-352 (558)
379 PRK05732 2-octaprenyl-6-methox 97.6 0.00074 1.6E-08 68.0 13.0 99 215-318 4-171 (395)
380 PRK12814 putative NADPH-depend 97.6 0.00014 3E-09 77.8 7.9 91 213-317 192-291 (652)
381 COG2072 TrkA Predicted flavopr 97.6 0.0019 4.1E-08 65.6 15.5 137 214-358 8-187 (443)
382 PRK12809 putative oxidoreducta 97.6 0.00017 3.6E-09 77.0 8.1 91 213-317 309-408 (639)
383 TIGR03315 Se_ygfK putative sel 97.6 0.0002 4.3E-09 78.6 8.7 90 214-318 537-635 (1012)
384 KOG0685 Flavin-containing amin 97.6 0.0001 2.2E-09 72.2 5.4 43 42-84 20-63 (498)
385 KOG2853 Possible oxidoreductas 97.6 0.00048 1.1E-08 64.3 9.4 42 43-84 86-140 (509)
386 TIGR03219 salicylate_mono sali 97.5 0.0007 1.5E-08 68.6 11.6 97 216-317 2-160 (414)
387 PRK05192 tRNA uridine 5-carbox 97.5 0.001 2.2E-08 69.0 12.7 94 216-315 6-156 (618)
388 KOG2852 Possible oxidoreductas 97.5 0.0017 3.8E-08 59.4 12.5 42 40-81 7-54 (380)
389 PRK12769 putative oxidoreducta 97.5 0.0002 4.3E-09 76.8 7.9 91 213-317 326-425 (654)
390 PTZ00153 lipoamide dehydrogena 97.5 0.00072 1.6E-08 71.6 11.7 34 44-77 313-346 (659)
391 PLN02927 antheraxanthin epoxid 97.5 0.00012 2.7E-09 76.9 5.6 36 41-76 79-114 (668)
392 PRK01438 murD UDP-N-acetylmura 97.5 0.00033 7.1E-09 72.4 8.6 80 213-320 15-94 (480)
393 PF05834 Lycopene_cycl: Lycope 97.5 0.0012 2.5E-08 65.9 12.2 96 216-317 1-143 (374)
394 PF06100 Strep_67kDa_ant: Stre 97.5 0.00068 1.5E-08 67.4 10.2 42 44-85 3-48 (500)
395 TIGR01989 COQ6 Ubiquinone bios 97.5 0.0012 2.5E-08 67.4 12.4 98 216-318 2-185 (437)
396 TIGR02462 pyranose_ox pyranose 97.5 0.00019 4.1E-09 73.9 6.5 39 44-82 1-39 (544)
397 COG3573 Predicted oxidoreducta 97.5 0.00017 3.7E-09 67.1 5.3 43 42-84 4-48 (552)
398 KOG1335 Dihydrolipoamide dehyd 97.5 0.00062 1.3E-08 64.7 9.0 98 43-189 211-315 (506)
399 TIGR02360 pbenz_hydroxyl 4-hyd 97.5 0.0018 4E-08 64.9 13.3 103 214-318 2-165 (390)
400 PLN03000 amine oxidase 97.5 0.00017 3.6E-09 77.5 5.9 43 42-84 183-225 (881)
401 PRK06185 hypothetical protein; 97.5 0.0025 5.4E-08 64.4 14.3 101 214-317 6-170 (407)
402 PRK11445 putative oxidoreducta 97.4 0.0027 5.9E-08 62.7 13.8 100 216-318 3-159 (351)
403 PF12831 FAD_oxidored: FAD dep 97.4 0.00015 3.2E-09 73.6 4.9 97 216-314 1-148 (428)
404 TIGR02028 ChlP geranylgeranyl 97.4 0.0023 5.1E-08 64.3 13.4 102 216-318 2-162 (398)
405 PLN00093 geranylgeranyl diphos 97.4 0.0041 8.8E-08 63.4 14.8 105 213-318 38-201 (450)
406 PLN02976 amine oxidase 97.4 0.00022 4.8E-09 79.4 5.8 44 41-84 691-734 (1713)
407 PF00732 GMC_oxred_N: GMC oxid 97.4 0.00015 3.2E-09 69.9 4.0 63 257-319 195-261 (296)
408 PRK01438 murD UDP-N-acetylmura 97.4 0.001 2.3E-08 68.7 10.6 33 43-75 16-48 (480)
409 TIGR01789 lycopene_cycl lycope 97.3 0.00095 2.1E-08 66.3 9.3 93 216-317 1-139 (370)
410 PRK08294 phenol 2-monooxygenas 97.3 0.0039 8.5E-08 66.4 13.8 103 214-316 32-210 (634)
411 TIGR01372 soxA sarcosine oxida 97.3 0.0036 7.7E-08 70.3 14.0 105 214-319 163-289 (985)
412 KOG1298 Squalene monooxygenase 97.3 0.0016 3.5E-08 62.1 9.1 35 41-75 43-77 (509)
413 COG0493 GltD NADPH-dependent g 97.3 0.00047 1E-08 69.6 6.0 89 214-316 123-220 (457)
414 PRK12771 putative glutamate sy 97.2 0.001 2.2E-08 70.1 8.6 91 212-317 135-235 (564)
415 PRK06481 fumarate reductase fl 97.2 0.0063 1.4E-07 63.2 14.1 105 215-320 62-256 (506)
416 KOG1276 Protoporphyrinogen oxi 97.2 0.00038 8.3E-09 67.1 4.7 40 43-82 11-52 (491)
417 KOG4254 Phytoene desaturase [C 97.2 0.00042 9.2E-09 67.2 4.9 57 41-97 12-68 (561)
418 PRK13984 putative oxidoreducta 97.2 0.001 2.2E-08 70.9 8.3 90 213-316 282-380 (604)
419 KOG2960 Protein involved in th 97.2 0.00018 3.8E-09 62.5 2.1 46 43-88 76-123 (328)
420 PRK06567 putative bifunctional 97.1 0.0014 3E-08 71.1 8.4 35 212-246 381-415 (1028)
421 PF13454 NAD_binding_9: FAD-NA 97.1 0.0069 1.5E-07 52.1 11.3 41 269-314 114-155 (156)
422 PF04820 Trp_halogenase: Trypt 97.1 0.0053 1.2E-07 62.6 12.2 57 256-318 155-213 (454)
423 TIGR00136 gidA glucose-inhibit 97.1 0.007 1.5E-07 62.8 13.0 96 216-317 2-155 (617)
424 TIGR00137 gid_trmFO tRNA:m(5)U 97.1 0.0015 3.3E-08 65.1 7.9 34 216-249 2-35 (433)
425 PRK02106 choline dehydrogenase 97.1 0.00058 1.3E-08 71.9 5.1 36 41-76 3-39 (560)
426 PF01946 Thi4: Thi4 family; PD 97.1 0.018 4E-07 51.1 13.4 106 214-319 17-168 (230)
427 KOG2844 Dimethylglycine dehydr 97.1 0.0053 1.1E-07 62.7 11.1 59 253-317 184-244 (856)
428 PLN02985 squalene monooxygenas 97.1 0.0089 1.9E-07 62.0 13.2 34 214-247 43-76 (514)
429 PLN02927 antheraxanthin epoxid 97.1 0.0072 1.6E-07 63.9 12.6 36 212-247 79-114 (668)
430 COG3380 Predicted NAD/FAD-depe 97.0 0.002 4.4E-08 58.5 7.1 95 216-314 3-158 (331)
431 COG1148 HdrA Heterodisulfide r 97.0 0.0021 4.5E-08 63.2 7.0 80 214-293 124-216 (622)
432 TIGR03862 flavo_PP4765 unchara 97.0 0.02 4.4E-07 56.4 14.0 119 66-188 1-141 (376)
433 COG1206 Gid NAD(FAD)-utilizing 96.9 0.0048 1E-07 57.7 8.7 36 44-79 4-39 (439)
434 TIGR01812 sdhA_frdA_Gneg succi 96.9 0.019 4.2E-07 60.6 14.3 54 263-316 137-191 (566)
435 PRK07573 sdhA succinate dehydr 96.8 0.02 4.4E-07 61.1 13.9 51 264-314 179-230 (640)
436 PRK06452 sdhA succinate dehydr 96.8 0.024 5.1E-07 59.8 14.1 54 261-314 142-196 (566)
437 TIGR01813 flavo_cyto_c flavocy 96.7 0.027 5.9E-07 57.5 13.8 56 260-316 135-192 (439)
438 TIGR03364 HpnW_proposed FAD de 96.6 0.022 4.8E-07 56.6 11.8 32 216-247 2-33 (365)
439 KOG0404 Thioredoxin reductase 96.6 0.02 4.3E-07 50.6 9.6 100 213-319 7-127 (322)
440 TIGR01811 sdhA_Bsu succinate d 96.6 0.035 7.6E-07 58.9 13.5 31 217-247 1-31 (603)
441 COG2303 BetA Choline dehydroge 96.6 0.0023 5E-08 66.7 4.6 61 261-321 209-271 (542)
442 PRK07803 sdhA succinate dehydr 96.5 0.046 1E-06 58.3 14.0 45 270-314 166-211 (626)
443 PRK08401 L-aspartate oxidase; 96.5 0.035 7.5E-07 57.1 12.7 32 215-246 2-33 (466)
444 KOG0042 Glycerol-3-phosphate d 96.5 0.0013 2.9E-08 65.3 2.2 43 42-84 66-108 (680)
445 PRK05945 sdhA succinate dehydr 96.5 0.038 8.3E-07 58.4 13.3 56 261-316 141-197 (575)
446 PRK06854 adenylylsulfate reduc 96.5 0.057 1.2E-06 57.4 14.2 52 263-314 140-193 (608)
447 TIGR00551 nadB L-aspartate oxi 96.4 0.052 1.1E-06 56.2 13.4 56 259-316 132-189 (488)
448 PF13450 NAD_binding_8: NAD(P) 96.4 0.0053 1.2E-07 44.3 4.3 31 219-249 1-31 (68)
449 PRK06263 sdhA succinate dehydr 96.4 0.049 1.1E-06 57.2 13.2 61 256-316 135-197 (543)
450 COG1251 NirB NAD(P)H-nitrite r 96.4 0.021 4.6E-07 59.4 9.9 100 214-320 3-117 (793)
451 KOG2820 FAD-dependent oxidored 96.3 0.058 1.2E-06 51.0 11.4 56 258-318 156-214 (399)
452 PRK08275 putative oxidoreducta 96.3 0.076 1.7E-06 55.9 14.0 61 256-316 138-200 (554)
453 COG0445 GidA Flavin-dependent 96.3 0.0096 2.1E-07 59.8 6.7 31 216-246 6-36 (621)
454 PRK06069 sdhA succinate dehydr 96.3 0.071 1.5E-06 56.4 13.8 48 268-315 151-199 (577)
455 PLN02785 Protein HOTHEAD 96.3 0.0048 1E-07 64.9 4.8 34 42-76 54-87 (587)
456 TIGR01810 betA choline dehydro 96.3 0.004 8.6E-08 65.2 4.2 32 45-76 1-33 (532)
457 PRK08626 fumarate reductase fl 96.2 0.074 1.6E-06 57.0 13.5 51 263-313 166-217 (657)
458 KOG2614 Kynurenine 3-monooxyge 96.2 0.026 5.6E-07 54.9 8.7 35 215-249 3-37 (420)
459 PRK08255 salicylyl-CoA 5-hydro 96.2 0.017 3.7E-07 63.1 8.5 33 216-248 2-36 (765)
460 PRK06175 L-aspartate oxidase; 96.1 0.089 1.9E-06 53.5 13.0 58 257-316 130-189 (433)
461 PTZ00139 Succinate dehydrogena 96.1 0.11 2.3E-06 55.4 13.8 56 260-315 171-228 (617)
462 PF13434 K_oxygenase: L-lysine 96.1 0.028 6.1E-07 55.0 8.8 104 216-320 4-163 (341)
463 COG3634 AhpF Alkyl hydroperoxi 96.0 0.018 4E-07 54.3 6.8 97 214-315 211-324 (520)
464 PRK07804 L-aspartate oxidase; 96.0 0.1 2.2E-06 54.8 13.2 33 215-247 17-49 (541)
465 PRK09078 sdhA succinate dehydr 96.0 0.11 2.4E-06 55.2 13.5 56 261-316 155-212 (598)
466 PRK14106 murD UDP-N-acetylmura 96.0 0.023 5.1E-07 58.2 8.3 33 43-75 5-37 (450)
467 TIGR01176 fum_red_Fp fumarate 96.0 0.14 3E-06 54.2 14.1 47 268-314 146-193 (580)
468 KOG1346 Programmed cell death 96.0 0.039 8.5E-07 53.3 8.8 97 42-189 346-450 (659)
469 PTZ00367 squalene epoxidase; P 95.9 0.06 1.3E-06 56.4 10.5 34 214-247 33-66 (567)
470 PLN00128 Succinate dehydrogena 95.9 0.15 3.3E-06 54.4 13.7 55 262-316 194-250 (635)
471 PRK09231 fumarate reductase fl 95.8 0.16 3.5E-06 53.7 13.9 47 268-314 147-194 (582)
472 PLN02815 L-aspartate oxidase 95.8 0.1 2.2E-06 55.2 12.1 54 260-313 160-219 (594)
473 PRK08958 sdhA succinate dehydr 95.7 0.19 4.1E-06 53.2 13.8 51 265-315 153-205 (588)
474 PF00996 GDI: GDP dissociation 95.7 0.013 2.8E-07 58.7 4.7 45 40-84 1-45 (438)
475 KOG3855 Monooxygenase involved 95.6 0.015 3.3E-07 56.2 4.4 40 41-80 34-79 (481)
476 KOG2311 NAD/FAD-utilizing prot 95.5 0.072 1.6E-06 52.6 8.8 32 215-246 29-60 (679)
477 PRK08641 sdhA succinate dehydr 95.5 0.27 5.9E-06 52.1 14.1 32 215-246 4-35 (589)
478 PRK05335 tRNA (uracil-5-)-meth 95.5 0.018 3.9E-07 57.2 4.9 35 215-249 3-37 (436)
479 COG4529 Uncharacterized protei 95.5 0.18 3.9E-06 50.3 11.6 35 215-249 2-39 (474)
480 PRK08071 L-aspartate oxidase; 95.5 0.18 4E-06 52.4 12.5 45 334-378 333-386 (510)
481 PRK14106 murD UDP-N-acetylmura 95.4 0.05 1.1E-06 55.8 8.0 81 213-320 4-84 (450)
482 PRK08205 sdhA succinate dehydr 95.4 0.28 6E-06 52.0 13.5 60 257-316 142-206 (583)
483 TIGR02485 CobZ_N-term precorri 95.3 0.21 4.5E-06 50.9 12.1 53 258-314 126-181 (432)
484 KOG0405 Pyridine nucleotide-di 95.2 0.25 5.4E-06 47.0 10.9 75 259-341 114-188 (478)
485 KOG1238 Glucose dehydrogenase/ 95.1 0.025 5.3E-07 58.2 4.6 37 40-76 54-91 (623)
486 TIGR03862 flavo_PP4765 unchara 95.1 0.19 4.1E-06 49.6 10.6 83 227-316 57-141 (376)
487 PF01593 Amino_oxidase: Flavin 94.9 0.022 4.8E-07 57.7 3.7 51 261-316 215-265 (450)
488 PRK09077 L-aspartate oxidase; 94.8 0.44 9.4E-06 50.0 13.0 56 259-314 142-205 (536)
489 PF13241 NAD_binding_7: Putati 94.8 0.026 5.6E-07 44.6 2.9 34 42-75 6-39 (103)
490 PF01210 NAD_Gly3P_dh_N: NAD-d 94.6 0.038 8.3E-07 47.5 3.9 31 45-75 1-31 (157)
491 PRK12835 3-ketosteroid-delta-1 94.6 0.44 9.6E-06 50.4 12.6 54 264-319 222-279 (584)
492 PRK07395 L-aspartate oxidase; 94.6 0.28 6.1E-06 51.5 10.8 52 261-314 140-195 (553)
493 PRK06475 salicylate hydroxylas 94.5 0.061 1.3E-06 54.2 5.7 35 215-249 3-37 (400)
494 COG0029 NadB Aspartate oxidase 94.5 0.24 5.2E-06 49.5 9.4 32 216-248 9-40 (518)
495 COG0569 TrkA K+ transport syst 94.5 0.048 1E-06 49.9 4.4 32 44-75 1-32 (225)
496 PRK07364 2-octaprenyl-6-methox 94.5 0.078 1.7E-06 53.7 6.3 36 214-249 18-53 (415)
497 PRK12844 3-ketosteroid-delta-1 94.4 0.8 1.7E-05 48.3 13.9 55 260-316 213-269 (557)
498 KOG0029 Amine oxidase [Seconda 94.4 0.049 1.1E-06 55.9 4.7 38 213-250 14-51 (501)
499 KOG1800 Ferredoxin/adrenodoxin 94.4 0.16 3.4E-06 48.9 7.5 64 215-278 21-96 (468)
500 KOG1298 Squalene monooxygenase 94.4 0.25 5.4E-06 47.7 8.8 31 216-246 47-77 (509)
No 1
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.1e-88 Score=618.58 Aligned_cols=502 Identities=68% Similarity=1.052 Sum_probs=469.6
Q ss_pred hhhHHHhhhhhhccccccccccceeeeeeccccccCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 3 MASLARRKAYVLSRNLSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
|-+..||....++.. +....+.......+.|.|.....+|||+|||+||+|..||++++++|++.+.||++..+||+|
T Consensus 1 ~~~~~rr~~~~~~~~--~~~~~~~~~~~~~~~r~fa~~~~d~DvvvIG~GpGGyvAAikAaQlGlkTacvEkr~~LGGTc 78 (506)
T KOG1335|consen 1 MQSGLRREASLFSTS--NQLPMGANRFIFSSKRSFASSANDYDVVVIGGGPGGYVAAIKAAQLGLKTACVEKRGTLGGTC 78 (506)
T ss_pred Ccchhhheeeeeecc--CcCccchhhhhhhhhhhhhccCccCCEEEECCCCchHHHHHHHHHhcceeEEEeccCccCcee
Confidence 345567766666655 333333333444455557777788999999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhHHHHHHHh-hhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCC
Q 010573 83 LNVGCIPSKALLHSSHMYHEAMH-SFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS 161 (507)
Q Consensus 83 ~~~~~~p~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~ 161 (507)
++.||+||+.+++.++.|+...+ .+.+.|+......+|.+.++..++..+.++...++..+++++|+++.|...+++++
T Consensus 79 LnvGcIPSKALL~nSh~yh~~q~~~~~~rGi~vs~~~~dl~~~~~~k~~~vk~Lt~gi~~lfkknkV~~~kG~gsf~~p~ 158 (506)
T KOG1335|consen 79 LNVGCIPSKALLNNSHLYHEAQHEDFASRGIDVSSVSLDLQAMMKAKDNAVKQLTGGIENLFKKNKVTYVKGFGSFLDPN 158 (506)
T ss_pred eeccccccHHHhhhhHHHHHHhhhHHHhcCccccceecCHHHHHHHHHHHHHHHhhHHHHHhhhcCeEEEeeeEeecCCc
Confidence 99999999999999999999888 78889999888999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeE
Q 010573 162 EVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVT 241 (507)
Q Consensus 162 ~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vt 241 (507)
.+.+...||+...+.++++|+||||.-.++||...++..+.++..++.+.+.|++++|||+|.+|+|++..+.++|.+||
T Consensus 159 ~V~v~k~dg~~~ii~aKnIiiATGSeV~~~PGI~IDekkIVSStgALsL~~vPk~~~viG~G~IGLE~gsV~~rLGseVT 238 (506)
T KOG1335|consen 159 KVSVKKIDGEDQIIKAKNIIIATGSEVTPFPGITIDEKKIVSSTGALSLKEVPKKLTVIGAGYIGLEMGSVWSRLGSEVT 238 (506)
T ss_pred eEEEeccCCCceEEeeeeEEEEeCCccCCCCCeEecCceEEecCCccchhhCcceEEEEcCceeeeehhhHHHhcCCeEE
Confidence 99999999988999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred EEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 242 VVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 242 lv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+++..+++.+.+|.++++.+++.|.++|++|++++.++..+.+++ .+.+++++..++..++++||.+++++|++|.+..
T Consensus 239 ~VEf~~~i~~~mD~Eisk~~qr~L~kQgikF~l~tkv~~a~~~~dg~v~i~ve~ak~~k~~tle~DvlLVsiGRrP~t~G 318 (506)
T KOG1335|consen 239 VVEFLDQIGGVMDGEISKAFQRVLQKQGIKFKLGTKVTSATRNGDGPVEIEVENAKTGKKETLECDVLLVSIGRRPFTEG 318 (506)
T ss_pred EEEehhhhccccCHHHHHHHHHHHHhcCceeEeccEEEEeeccCCCceEEEEEecCCCceeEEEeeEEEEEccCcccccC
Confidence 999999999999999999999999999999999999999988776 7788888888888899999999999999999999
Q ss_pred CCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeee
Q 010573 321 LGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVAS 400 (507)
Q Consensus 321 l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~ 400 (507)
|++++.|++.|.+|++.||..++|.+|+||+|||+..+|++++.|..||..+.+.|.+.....+|..+|.+.|++|+++|
T Consensus 319 Lgle~iGi~~D~r~rv~v~~~f~t~vP~i~~IGDv~~gpMLAhkAeeegI~~VE~i~g~~~hv~ynciP~v~ythPEvaw 398 (506)
T KOG1335|consen 319 LGLEKIGIELDKRGRVIVNTRFQTKVPHIYAIGDVTLGPMLAHKAEEEGIAAVEGIAGGHGHVDYNCIPSVVYTHPEVAW 398 (506)
T ss_pred CChhhcccccccccceeccccccccCCceEEecccCCcchhhhhhhhhchhheeeecccCcccccCCCCceeecccceee
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred ecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHh
Q 010573 401 VGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIA 480 (507)
Q Consensus 401 vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 480 (507)
||+||+++++.|++|+++++||..+.|+....+.+||+|+++|+++++|||+||+|++|.|+|+..++||..|.+.+|++
T Consensus 399 VG~TEeqlkeegi~y~vgkfpF~aNsRaktn~d~eg~vKvl~d~~tdkiLGvHiigp~AgEli~EA~lAieyGasaeDva 478 (506)
T KOG1335|consen 399 VGKTEEQLKEEGIKYKVGKFPFSANSRAKTNNDTEGFVKVLADKETDKILGVHIIGPNAGELIHEASLAIEYGASAEDVA 478 (506)
T ss_pred eccchhhHHhcCcceEeeeccccccchhhccCCccceeEEEecCCCCcEEEEEEecCCHHHHHHHHHHHHHhCccHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCChHHHHHHHHHHhcc-CCCC
Q 010573 481 RVCHAHPTMSEALKEAAMATHD-KPIH 506 (507)
Q Consensus 481 ~~~~~~p~~~~~~~~~~~~~~~-~~~~ 506 (507)
..+++|||+||+|+++.+++-. ++.|
T Consensus 479 rvchaHPTlSEa~kEa~~aA~~~k~Ih 505 (506)
T KOG1335|consen 479 RVCHAHPTLSEAFKEANMAAYDGKPIH 505 (506)
T ss_pred hccCCCCcHHHHHHHHHHHhhccCCCC
Confidence 9999999999999999888765 5544
No 2
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=100.00 E-value=9.8e-86 Score=650.10 Aligned_cols=452 Identities=53% Similarity=0.831 Sum_probs=420.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+.+||++|||+||||..||.++++.|.+|+|||+...+||+|+|.||+|+|.+++.+..+..+.+.-..+|+......++
T Consensus 2 ~~~yDvvVIG~GpaG~~aA~raa~~G~kvalvE~~~~lGGtCln~GCIPsK~Ll~~a~~~~~~~~~~~~~Gi~~~~~~id 81 (454)
T COG1249 2 MKEYDVVVIGAGPAGYVAAIRAAQLGLKVALVEKGERLGGTCLNVGCIPSKALLHAAEVIEEARHAAKEYGISAEVPKID 81 (454)
T ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCEEEEeecCCcCceEEeeCccccHHHHHHHHHHHHHhhcccccceecCCCCcC
Confidence 45699999999999999999999999999999997799999999999999999999999887776533678877766899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCce
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~ 200 (507)
|.++..+++.....+....+.+++.++|+++.|.+.+.+++++.|... +.+++.+|++||||||+|..+|....++..
T Consensus 82 ~~~~~~~k~~v~~~~~~~~~~l~~~~~V~vi~G~a~f~~~~~v~V~~~--~~~~~~a~~iiIATGS~p~~~~~~~~~~~~ 159 (454)
T COG1249 82 FEKLLARKDKVVRLLTGGVEGLLKKNGVDVIRGEARFVDPHTVEVTGE--DKETITADNIIIATGSRPRIPPGPGIDGAR 159 (454)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhCCCEEEEEEEEECCCCEEEEcCC--CceEEEeCEEEEcCCCCCcCCCCCCCCCCe
Confidence 999999999988888888999999999999999999999999999865 348999999999999999888877777888
Q ss_pred EecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 201 ~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
++++++.+.+.+.|++++|||+|++|+|+|..|+++|++||++++.++++|.+|+++++.+.+.|++.|+++++++.+++
T Consensus 160 ~~~s~~~l~~~~lP~~lvIiGgG~IGlE~a~~~~~LG~~VTiie~~~~iLp~~D~ei~~~~~~~l~~~gv~i~~~~~v~~ 239 (454)
T COG1249 160 ILDSSDALFLLELPKSLVIVGGGYIGLEFASVFAALGSKVTVVERGDRILPGEDPEISKELTKQLEKGGVKILLNTKVTA 239 (454)
T ss_pred EEechhhcccccCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCCcCCHHHHHHHHHHHHhCCeEEEccceEEE
Confidence 99999987777999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~ 360 (507)
++..++++.+++++. +..++++|.+++|+|++||++.|++++.|++++++|+|+||+.++|++|||||+|||++.++
T Consensus 240 ~~~~~~~v~v~~~~g---~~~~~~ad~vLvAiGR~Pn~~~LgLe~~Gv~~~~rg~I~VD~~~~Tnvp~IyA~GDV~~~~~ 316 (454)
T COG1249 240 VEKKDDGVLVTLEDG---EGGTIEADAVLVAIGRKPNTDGLGLENAGVELDDRGFIKVDDQMTTNVPGIYAIGDVIGGPM 316 (454)
T ss_pred EEecCCeEEEEEecC---CCCEEEeeEEEEccCCccCCCCCChhhcCceECCCCCEEeCCccccCCCCEEEeeccCCCcc
Confidence 988777777777632 22279999999999999999999999999999999999999888899999999999999999
Q ss_pred cHhHHHHHHHHHHHHHcC-CCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEE
Q 010573 361 LAHKAEEDGVACVEFLAG-KHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (507)
+++.|.+||++||+||++ .....+|..+|+++|++|++++||+||+|+++.+.++++.+++|....++....++.||+|
T Consensus 317 Lah~A~~eg~iaa~~i~g~~~~~~d~~~iP~~ift~Peia~VGlte~ea~~~g~~~~~~~~~f~~~~ra~~~~~~~G~~K 396 (454)
T COG1249 317 LAHVAMAEGRIAAENIAGGKRTPIDYRLIPSVVFTDPEIASVGLTEEEAKEAGIDYKVGKFPFAANGRAITMGETDGFVK 396 (454)
T ss_pred cHhHHHHHHHHHHHHHhCCCCCcCcccCCCEEEECCCcceeeeCCHHHHHhcCCceEEEEeecccchhHHhccCCceEEE
Confidence 999999999999999997 4456789999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 440 ILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 440 ~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
+++|+++++|||+|++|++|.|+|+.++++|+++++.+++..++++|||++|++.+++
T Consensus 397 lv~d~~t~~IlGahivg~~A~ElI~~~~~a~~~g~t~~~~~~~i~~HPT~sE~~~~a~ 454 (454)
T COG1249 397 LVVDKETGRILGAHIVGPGASELINEIALAIEMGATAEDLALTIHAHPTLSEALKEAA 454 (454)
T ss_pred EEEECCCCeEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCCCCCCChHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999998764
No 3
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=2.7e-78 Score=615.89 Aligned_cols=462 Identities=46% Similarity=0.711 Sum_probs=417.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+.+|||+||||||||++||..|++.|++|+|||+.+.+||+|++.||+|+|.++.....++... .+..+|+......++
T Consensus 2 ~~~~DvvVIG~GpaG~~aA~~aa~~G~~V~lie~~~~~GG~c~n~gciP~K~l~~~a~~~~~~~-~~~~~g~~~~~~~~~ 80 (471)
T PRK06467 2 EIKTQVVVLGAGPAGYSAAFRAADLGLETVCVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAK-ALAEHGIVFGEPKID 80 (471)
T ss_pred CccceEEEECCCHHHHHHHHHHHHCCCcEEEEecCCcccccccCCCcccHHHHHHHHHHHHHHh-hhhhcCcccCCCCcC
Confidence 4569999999999999999999999999999999778999999999999999998888777664 456678877777899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCce
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~ 200 (507)
|..+..+++..+.++...+..++++.+|+++.+.+.+++++.+.|...+|+..++.||+||||||++|..+|+...+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~a~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~~p~~~~~~~~ 160 (471)
T PRK06467 81 IDKMRARKEKVVKQLTGGLAGMAKGRKVTVVNGLGKFTGGNTLEVTGEDGKTTVIEFDNAIIAAGSRPIQLPFIPHDDPR 160 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCceEEEEcCEEEEeCCCCCCCCCCCCCCCCc
Confidence 99999999999999888888899999999999999999999988887666456899999999999999765655444556
Q ss_pred EecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 201 ~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
++++.+.+.+...+++++|||+|++|+|+|..|.++|.+||++++.+++++.+|+++.+.+.+.|+++ +++++++++++
T Consensus 161 v~~~~~~~~~~~~~~~vvIiGgG~iG~E~A~~l~~~G~~Vtlv~~~~~il~~~d~~~~~~~~~~l~~~-v~i~~~~~v~~ 239 (471)
T PRK06467 161 IWDSTDALELKEVPKRLLVMGGGIIGLEMGTVYHRLGSEVDVVEMFDQVIPAADKDIVKVFTKRIKKQ-FNIMLETKVTA 239 (471)
T ss_pred EEChHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEecCCCCCCcCCHHHHHHHHHHHhhc-eEEEcCCEEEE
Confidence 88888888888889999999999999999999999999999999999999999999999999999988 99999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~ 360 (507)
++.+++++.+++.+. +++.+++++|.|++++|++|+++.+.++..|++++++|+|.||+++||++|+|||+|||++.|.
T Consensus 240 i~~~~~~~~v~~~~~-~~~~~~i~~D~vi~a~G~~pn~~~l~~~~~gl~~~~~G~I~Vd~~~~t~~p~VyAiGDv~~~~~ 318 (471)
T PRK06467 240 VEAKEDGIYVTMEGK-KAPAEPQRYDAVLVAVGRVPNGKLLDAEKAGVEVDERGFIRVDKQCRTNVPHIFAIGDIVGQPM 318 (471)
T ss_pred EEEcCCEEEEEEEeC-CCcceEEEeCEEEEeecccccCCccChhhcCceECCCCcEeeCCCcccCCCCEEEehhhcCCcc
Confidence 987777777666432 1224679999999999999999977678889999999999999999999999999999999899
Q ss_pred cHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEE
Q 010573 361 LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 440 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 440 (507)
+++.|.+||+.||+||++...++++..+|+++|++|++++||+||++|+..|+++.++.+++....++...++++||+|+
T Consensus 319 la~~A~~eG~~aa~~i~g~~~~~~~~~~p~~~~~~p~ia~vGlte~ea~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl 398 (471)
T PRK06467 319 LAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEEGIEYETATFPWAASGRAIASDCADGMTKL 398 (471)
T ss_pred cHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceeEEECCHHHHHhcCCCeEEEEEecCcchhhhhCCCCceEEEE
Confidence 99999999999999999877778888999999999999999999999999999999999999888888777788999999
Q ss_pred EEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCC
Q 010573 441 LAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPI 505 (507)
Q Consensus 441 ~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~ 505 (507)
++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++...+++.
T Consensus 399 i~d~~t~~ilG~~~vg~~a~e~i~~~a~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~~~~~ 463 (471)
T PRK06467 399 IFDKETHRVLGGAIVGTNAGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEAFEGSIT 463 (471)
T ss_pred EEECCCCeEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999987655433
No 4
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=3.2e-78 Score=615.10 Aligned_cols=459 Identities=57% Similarity=0.942 Sum_probs=414.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHh-hhhhCCcccCccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMH-SFASHGVKFSSVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 121 (507)
+|||+||||||||++||..|++.|++|+|||+++.+||+|.+.||+|+|.++.....++.... ....+|+.. ....+|
T Consensus 3 ~~DvvVIG~GpaG~~AA~~aa~~G~~V~liE~~~~~GG~c~~~gciPsK~l~~~~~~~~~~~~~~~~~~gi~~-~~~~~~ 81 (466)
T PRK06115 3 SYDVVIIGGGPGGYNAAIRAGQLGLKVACVEGRSTLGGTCLNVGCMPSKALLHASELYEAASGGEFAHLGIEV-KPTLNL 81 (466)
T ss_pred cccEEEECCCHHHHHHHHHHHhCCCeEEEEecCCceeeeeccCcccccHHHHHHhHHHHHHhhhhhhhcCccc-cCccCH
Confidence 499999999999999999999999999999987889999999999999999998888765543 345667754 357899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
.+++.+++..+..+...++.++++.+|+++.+.+.+.+.+++.+.+.+|+..++.||+||||||++|+.+|+...++..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~~d~lVIATGs~p~~ipg~~~~~~~~ 161 (466)
T PRK06115 82 AQMMKQKDESVEALTKGVEFLFRKNKVDWIKGWGRLDGVGKVVVKAEDGSETQLEAKDIVIATGSEPTPLPGVTIDNQRI 161 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEEcCCCceEEEEeCEEEEeCCCCCCCCCCCCCCCCeE
Confidence 99999999999988888888899999999999998888888888877775567999999999999998888876566678
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+++.+++.+...+++++|||+|++|+|+|..+.++|.+|+++++.+++++.+|+++.+.+++.|++.||+++++++++++
T Consensus 162 ~~~~~~~~~~~~~~~vvIIGgG~ig~E~A~~l~~~G~~Vtlie~~~~il~~~d~~~~~~l~~~l~~~gV~i~~~~~V~~i 241 (466)
T PRK06115 162 IDSTGALSLPEVPKHLVVIGAGVIGLELGSVWRRLGAQVTVVEYLDRICPGTDTETAKTLQKALTKQGMKFKLGSKVTGA 241 (466)
T ss_pred ECHHHHhCCccCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCHHHHHHHHHHHHhcCCEEEECcEEEEE
Confidence 88888887777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCc
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPML 361 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~ 361 (507)
+.+++++.+.+....+++++++++|.|++++|++|++..+.++..+++++++| +.||+++||++|+|||+|||++.|++
T Consensus 242 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~~~g~~~~~~G-~~vd~~~~Ts~~~IyA~GD~~~~~~l 320 (466)
T PRK06115 242 TAGADGVSLTLEPAAGGAAETLQADYVLVAIGRRPYTQGLGLETVGLETDKRG-MLANDHHRTSVPGVWVIGDVTSGPML 320 (466)
T ss_pred EEcCCeEEEEEEEcCCCceeEEEeCEEEEccCCccccccCCcccccceeCCCC-EEECCCeecCCCCEEEeeecCCCccc
Confidence 87666776666433334567899999999999999999877788889988766 77999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEE
Q 010573 362 AHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKIL 441 (507)
Q Consensus 362 ~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 441 (507)
++.|.+||++||+||++.....++..+|.++|++|++++||+||++|++.|+++.++.+++....++.+.++++||+|++
T Consensus 321 a~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~t~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~klv 400 (466)
T PRK06115 321 AHKAEDEAVACIERIAGKAGEVNYGLIPGVIYTRPEVATVGKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKIL 400 (466)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCcccEEeeCCHHHHHHCCCCEEEEEEecccChhhHhcCCCceEEEEE
Confidence 99999999999999998766678889999999999999999999999999999999999999999988888888999999
Q ss_pred EECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccC
Q 010573 442 AEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDK 503 (507)
Q Consensus 442 ~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~ 503 (507)
+|+++++|||+|++|+++.|+|+.+++||+.++|++||.+++++|||++|++.++++.+.+.
T Consensus 401 ~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~dl~~~~~~hPt~~e~~~~a~~~~~~~ 462 (466)
T PRK06115 401 ADARTDEVLGVHMVGPSVSEMIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVEGW 462 (466)
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhCccCCCChHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999877654
No 5
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=1.2e-75 Score=597.93 Aligned_cols=460 Identities=41% Similarity=0.675 Sum_probs=408.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.+|||+||||||||++||.+|++.|++|+|||+ +.+||+|.+.||+|++.++.....++.+......+|+. ....+++
T Consensus 3 ~~~DvvIIG~GpaG~~AA~~aa~~G~~V~lie~-~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~~gi~-~~~~~~~ 80 (466)
T PRK07818 3 THYDVVVLGAGPGGYVAAIRAAQLGLKTAVVEK-KYWGGVCLNVGCIPSKALLRNAELAHIFTKEAKTFGIS-GEVTFDY 80 (466)
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCceecCCccccHHHHhhHHHHHHHHHHHHhcCCC-cCcccCH
Confidence 359999999999999999999999999999998 68999999999999999888777777666555667775 3457899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
..+..+++....++.......++..+|+.+.+.+.+++.+.+.+...+|+..++.||+||||||++|..+|+.+.. ..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~~pg~~~~-~~v 159 (466)
T PRK07818 81 GAAFDRSRKVAEGRVKGVHFLMKKNKITEIHGYGTFTDANTLEVDLNDGGTETVTFDNAIIATGSSTRLLPGTSLS-ENV 159 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcCCCEEEEEecCCCeeEEEcCEEEEeCCCCCCCCCCCCCC-CcE
Confidence 9999999888888877777777888999999999999999998887776556899999999999999777876432 246
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
++.++.......+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+|+++.+.+++.|+++||+++++++|+++
T Consensus 160 ~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~i~~~~~v~~i 239 (466)
T PRK07818 160 VTYEEQILSRELPKSIVIAGAGAIGMEFAYVLKNYGVDVTIVEFLDRALPNEDAEVSKEIAKQYKKLGVKILTGTKVESI 239 (466)
T ss_pred EchHHHhccccCCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcCCccCHHHHHHHHHHHHHCCCEEEECCEEEEE
Confidence 67766655556789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCc
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPML 361 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~ 361 (507)
+.+++.+.+.+.. .+++.+++++|.|++|+|++|+++.+.++..|++++++|+|.||+++||+.|+|||+|||++.+++
T Consensus 240 ~~~~~~~~v~~~~-~~g~~~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~g~i~vd~~~~Ts~p~IyAiGD~~~~~~l 318 (466)
T PRK07818 240 DDNGSKVTVTVSK-KDGKAQELEADKVLQAIGFAPRVEGYGLEKTGVALTDRGAIAIDDYMRTNVPHIYAIGDVTAKLQL 318 (466)
T ss_pred EEeCCeEEEEEEe-cCCCeEEEEeCEEEECcCcccCCCCCCchhcCcEECCCCcEeeCCCcccCCCCEEEEeecCCCccc
Confidence 8766666665542 233446899999999999999999776788999998889999999999999999999999998899
Q ss_pred HhHHHHHHHHHHHHHcCCCC-CC-CCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEE
Q 010573 362 AHKAEEDGVACVEFLAGKHG-HV-DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (507)
Q Consensus 362 ~~~A~~~g~~aa~~i~~~~~-~~-~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (507)
++.|..||+.||.||++... .+ ++..+|.++|++|++++||+||++|+..|+++.+..+++....++.+.+++.||+|
T Consensus 319 ~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~K 398 (466)
T PRK07818 319 AHVAEAQGVVAAETIAGAETLELGDYRMMPRATFCQPQVASFGLTEEQAREEGYDVKVAKFPFTANGKAHGLGDPTGFVK 398 (466)
T ss_pred HhHHHHHHHHHHHHHcCCCCCccCccCCCCeEEECCCCeEEEeCCHHHHHhCCCcEEEEEEECCccchhhhcCCCCeEEE
Confidence 99999999999999998653 34 77889999999999999999999999999999999999999999888888899999
Q ss_pred EEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCC
Q 010573 440 ILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPI 505 (507)
Q Consensus 440 ~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~ 505 (507)
+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++....+..
T Consensus 399 lv~~~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~ 464 (466)
T PRK07818 399 LVADAKYGELLGGHLIGPDVSELLPELTLAQKWDLTAEELARNVHTHPTLSEALKEAFHGLAGHMI 464 (466)
T ss_pred EEEECCCCeEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcCccCCCchHHHHHHHHHHhhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999998766543
No 6
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=100.00 E-value=4.6e-75 Score=594.62 Aligned_cols=457 Identities=32% Similarity=0.519 Sum_probs=407.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.+|||+||||||||++||.+|++.|++|+|||+++.+||+|.+.+|+|++.+......+....+......+. ....+++
T Consensus 4 ~~yDvvVIGaGpaG~~aA~~la~~G~~v~liE~~~~~GG~~~~~gcipsk~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 82 (461)
T PRK05249 4 YDYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYRNVGGGCTHTGTIPSKALREAVLRLIGFNQNPLYSSYR-VKLRITF 82 (461)
T ss_pred ccccEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccccCCCCHHHHHHHHHHHHHHhhhhhhcccC-CcCccCH
Confidence 459999999999999999999999999999999889999999999999998877666654433211111111 1235689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
..+..+.+.....+...+.+++++.+++++.+++.+++.+.+.+...+|+...+.||+||||||++|..+|........+
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviATGs~p~~p~~~~~~~~~v 162 (461)
T PRK05249 83 ADLLARADHVINKQVEVRRGQYERNRVDLIQGRARFVDPHTVEVECPDGEVETLTADKIVIATGSRPYRPPDVDFDHPRI 162 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCEEEEEeCCCceEEEEcCEEEEcCCCCCCCCCCCCCCCCeE
Confidence 99999999888888888888899999999999999999999888877775457999999999999997666555556678
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+++.+++.+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+|+++.+.+.+.+++.||+++++++++++
T Consensus 163 ~~~~~~~~~~~~~~~v~IiGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gI~v~~~~~v~~i 242 (461)
T PRK05249 163 YDSDSILSLDHLPRSLIIYGAGVIGCEYASIFAALGVKVTLINTRDRLLSFLDDEISDALSYHLRDSGVTIRHNEEVEKV 242 (461)
T ss_pred EcHHHhhchhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCCcCCHHHHHHHHHHHHHcCCEEEECCEEEEE
Confidence 88888888878899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCc
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPML 361 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~ 361 (507)
+.+++++.+++. +++++++|.|++|+|++|+++.+.++..+++++++|+|.||+++||+.|+|||+|||++.+.+
T Consensus 243 ~~~~~~~~v~~~-----~g~~i~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyAiGD~~~~~~~ 317 (461)
T PRK05249 243 EGGDDGVIVHLK-----SGKKIKADCLLYANGRTGNTDGLNLENAGLEADSRGQLKVNENYQTAVPHIYAVGDVIGFPSL 317 (461)
T ss_pred EEeCCeEEEEEC-----CCCEEEeCEEEEeecCCccccCCCchhhCcEecCCCcEeeCCCcccCCCCEEEeeecCCCccc
Confidence 877677666653 345799999999999999999776788899999999999999999999999999999998899
Q ss_pred HhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEE
Q 010573 362 AHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKIL 441 (507)
Q Consensus 362 ~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 441 (507)
++.|.+||+.||.||++.....++..+|+++|+.|++++||+||++|++.|+++.++.+++....++.+.++++||+|++
T Consensus 318 ~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~i~~~p~ia~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~klv 397 (461)
T PRK05249 318 ASASMDQGRIAAQHAVGEATAHLIEDIPTGIYTIPEISSVGKTEQELTAAKVPYEVGRARFKELARAQIAGDNVGMLKIL 397 (461)
T ss_pred HhHHHHHHHHHHHHHcCCCcccccCCCCeEEECCCcceEecCCHHHHHHcCCCeEEEEEccccccceeecCCCCcEEEEE
Confidence 99999999999999998766678889999999999999999999999999999999999999888888888888999999
Q ss_pred EECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCC
Q 010573 442 AEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKP 504 (507)
Q Consensus 442 ~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~ 504 (507)
+|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.+.+++
T Consensus 398 ~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~ 460 (461)
T PRK05249 398 FHRETLEILGVHCFGERATEIIHIGQAIMEQKGTIEYFVNTTFNYPTMAEAYRVAALDGLNRL 460 (461)
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999998776643
No 7
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=1.2e-74 Score=590.96 Aligned_cols=461 Identities=55% Similarity=0.922 Sum_probs=412.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEec------CCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCccc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF 114 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~------~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~ 114 (507)
...||++||||||||++||.++++.|.+|+|||+ ...+||+|.+.+|+|++.+......+..+.+.+..+|+..
T Consensus 2 ~~~~DviIIG~G~aG~~aA~~~~~~g~~v~lie~~~~~~g~~~~Gg~c~n~gc~P~k~l~~~a~~~~~~~~~~~~~G~~~ 81 (475)
T PRK06327 2 SKQFDVVVIGAGPGGYVAAIRAAQLGLKVACIEAWKNPKGKPALGGTCLNVGCIPSKALLASSEEFENAGHHFADHGIHV 81 (475)
T ss_pred CcceeEEEECCCHHHHHHHHHHHhCCCeEEEEecccCCCCCCCcCCccccccccHHHHHHHHHHHHHHHHhhHHhcCccC
Confidence 3469999999999999999999999999999998 3689999999999999999988888887776666778876
Q ss_pred CccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEec----CCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 115 SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS----PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d----~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
....++|.++..+++..+..+...++.+++..+|+++.+++.+++ ...+.+...++ .+++||+||||||++|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~v~v~~~~~--~~~~~d~lViATGs~p~~ 159 (475)
T PRK06327 82 DGVKIDVAKMIARKDKVVKKMTGGIEGLFKKNKITVLKGRGSFVGKTDAGYEIKVTGEDE--TVITAKHVIIATGSEPRH 159 (475)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCCCCCEEEEecCCC--eEEEeCEEEEeCCCCCCC
Confidence 666789999999999999888888888999999999999998887 45555543333 589999999999999976
Q ss_pred CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCc
Q 010573 191 LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 191 ~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv 270 (507)
+|+...+...++++++.+.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+.+.|++.||
T Consensus 160 ~p~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~gi 239 (475)
T PRK06327 160 LPGVPFDNKIILDNTGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGAEVTILEALPAFLAAADEQVAKEAAKAFTKQGL 239 (475)
T ss_pred CCCCCCCCceEECcHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCccCCcCCHHHHHHHHHHHHHcCc
Confidence 77766556678888888877778999999999999999999999999999999999999998999999999999999999
Q ss_pred EEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
+++++++|++++.+++++.+.+.+. +++.+++++|.|++++|++|++..+.++..+++++++|+|.||+++||++|+||
T Consensus 240 ~i~~~~~v~~i~~~~~~v~v~~~~~-~g~~~~i~~D~vl~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~Ts~~~Vy 318 (475)
T PRK06327 240 DIHLGVKIGEIKTGGKGVSVAYTDA-DGEAQTLEVDKLIVSIGRVPNTDGLGLEAVGLKLDERGFIPVDDHCRTNVPNVY 318 (475)
T ss_pred EEEeCcEEEEEEEcCCEEEEEEEeC-CCceeEEEcCEEEEccCCccCCCCCCcHhhCceeCCCCeEeECCCCccCCCCEE
Confidence 9999999999987777777666432 233357999999999999999987667888999999999999999999999999
Q ss_pred EecCCCCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhh
Q 010573 351 AIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKA 430 (507)
Q Consensus 351 A~GD~a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (507)
|+|||++.+.+++.|..||+.||.||++....+++..+|+++|++|++++||+||++++..|+++.+..+++....++.+
T Consensus 319 A~GD~~~~~~~~~~A~~~G~~aa~~i~g~~~~~~~~~~p~~~~~~pe~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~ 398 (475)
T PRK06327 319 AIGDVVRGPMLAHKAEEEGVAVAERIAGQKGHIDYNTIPWVIYTSPEIAWVGKTEQQLKAEGVEYKAGKFPFMANGRALA 398 (475)
T ss_pred EEEeccCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEeCCcceEEEeCCHHHHHHcCCCEEEEEEcccccchhhh
Confidence 99999998889999999999999999987666778889999999999999999999999999999999999988888888
Q ss_pred cCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCC
Q 010573 431 IDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKP 504 (507)
Q Consensus 431 ~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~ 504 (507)
.+++.||+|+++|+++++|||+|++|+++.|+|+.++.||++++|++||.+++++|||++|.+.++++.+...+
T Consensus 399 ~~~~~g~~klv~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~ 472 (475)
T PRK06327 399 MGEPDGFVKIIADAKTDEILGVHVIGPNASELIAEAVVAMEFKASSEDIARICHAHPTLSEVWHEAALAVDKRP 472 (475)
T ss_pred cCCCCeEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCCcCCCChHHHHHHHHHHhccCc
Confidence 88889999999999999999999999999999999999999999999999999999999999999987664443
No 8
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=1.2e-74 Score=591.31 Aligned_cols=458 Identities=51% Similarity=0.812 Sum_probs=411.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..|||+||||||||++||..|++.|++|+|||++. +||+|.+.||+|++.+......++.... ...+|+......++|
T Consensus 3 ~~yDvvVIGaGpaG~~aA~~aa~~G~~V~liE~~~-~GG~c~~~gciP~k~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~ 80 (462)
T PRK06416 3 FEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEK-LGGTCLNRGCIPSKALLHAAERADEARH-SEDFGIKAENVGIDF 80 (462)
T ss_pred ccccEEEECCCHHHHHHHHHHHHCCCcEEEEeccc-cccceeecccCCcHHHHHhhhHHHHHHH-HHhcCcccCCCccCH
Confidence 35999999999999999999999999999999965 9999999999999999988887776554 466676654556799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
..+..+.+...+.+...+...+++.+|+++.+++.+++++.+.+...++. ..+.||+||||||++|..+|+...++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~~~-~~~~~d~lViAtGs~p~~~pg~~~~~~~v 159 (462)
T PRK06416 81 KKVQEWKNGVVNRLTGGVEGLLKKNKVDIIRGEAKLVDPNTVRVMTEDGE-QTYTAKNIILATGSRPRELPGIEIDGRVI 159 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCc-EEEEeCEEEEeCCCCCCCCCCCCCCCCeE
Confidence 99999999988888888888888999999999999999999888754432 67999999999999998788876666678
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+++.+...+...+++++|||+|++|+|+|..|.+.|.+||++++.+++++.+++++.+.+.+.+++.||+++++++++++
T Consensus 160 ~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~V~~i 239 (462)
T PRK06416 160 WTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILPGEDKEISKLAERALKKRGIKIKTGAKAKKV 239 (462)
T ss_pred EcchHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCcCCcCCHHHHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 88888888777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCc
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPML 361 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~ 361 (507)
+.+++++.+.+.+ +++.+++++|.||+|+|++|++.++.++..|++++ +|+|.||+++||++|+|||+|||++.+.+
T Consensus 240 ~~~~~~v~v~~~~--gg~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~g~i~vd~~~~t~~~~VyAiGD~~~~~~~ 316 (462)
T PRK06416 240 EQTDDGVTVTLED--GGKEETLEADYVLVAVGRRPNTENLGLEELGVKTD-RGFIEVDEQLRTNVPNIYAIGDIVGGPML 316 (462)
T ss_pred EEeCCEEEEEEEe--CCeeEEEEeCEEEEeeCCccCCCCCCchhcCCeec-CCEEeECCCCccCCCCEEEeeecCCCcch
Confidence 8777777666542 12336799999999999999999876778899988 79999999999999999999999988889
Q ss_pred HhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEE
Q 010573 362 AHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKIL 441 (507)
Q Consensus 362 ~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 441 (507)
++.|..||+.||.||++....+++..+|.+.|++|+++++|+|+++|+..|+++.+..+++....++.+.+++++++|++
T Consensus 317 ~~~A~~~g~~aa~ni~~~~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kli 396 (462)
T PRK06416 317 AHKASAEGIIAAEAIAGNPHPIDYRGIPAVTYTHPEVASVGLTEAKAKEEGFDVKVVKFPFAGNGKALALGETDGFVKLI 396 (462)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCeEEEEEecCcChHhHhcCCCceEEEEE
Confidence 99999999999999998776677888999999999999999999999999999999999988888888777889999999
Q ss_pred EECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCC
Q 010573 442 AEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPI 505 (507)
Q Consensus 442 ~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~ 505 (507)
+|+++++|||+|++|+++.|+|+.++.||++++|++||.+++++|||++|++..+++.+.++..
T Consensus 397 ~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~ 460 (462)
T PRK06416 397 FDKKDGEVLGAHMVGARASELIQEAQLAINWEATPEDLALTIHPHPTLSEALGEAALAAAGKPL 460 (462)
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCccCCCCHHHHHHHHHHHhccCcc
Confidence 9999999999999999999999999999999999999999999999999999999988766544
No 9
>PLN02507 glutathione reductase
Probab=100.00 E-value=1.7e-74 Score=589.56 Aligned_cols=447 Identities=30% Similarity=0.480 Sum_probs=397.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEec---------CCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK---------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG 111 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~---------~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g 111 (507)
..+||++||||||||+.||..|+++|.+|+|||+ .+.+||+|.+.||+|+|.++.....++...+ ...+|
T Consensus 23 ~~~yDvvVIG~GpaG~~aA~~a~~~G~~V~liE~~~~~~~~~~~~~~GGtc~n~GciPsK~l~~~a~~~~~~~~-~~~~G 101 (499)
T PLN02507 23 HYDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSESIGGVGGTCVIRGCVPKKILVYGATFGGEFED-AKNYG 101 (499)
T ss_pred ccccCEEEECCCHHHHHHHHHHHHCCCeEEEEeccCcccccccCCCccceeeccCchhHHHHHHHHHHHHHHHH-HHhcC
Confidence 3469999999999999999999999999999996 3579999999999999999998888776654 46677
Q ss_pred cccC-ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 112 VKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 112 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
+... ...++|.++..+....+.++...++..+...+|+++.+.+.+++++.+.|.+.+|+...+.||+||||||++|..
T Consensus 102 ~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~i~g~a~~vd~~~v~V~~~~g~~~~~~~d~LIIATGs~p~~ 181 (499)
T PLN02507 102 WEINEKVDFNWKKLLQKKTDEILRLNGIYKRLLANAGVKLYEGEGKIVGPNEVEVTQLDGTKLRYTAKHILIATGSRAQR 181 (499)
T ss_pred cccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecCCEEEEEeCCCcEEEEEcCEEEEecCCCCCC
Confidence 7653 457899999999999999988888889999999999999999999999999888755679999999999999853
Q ss_pred --CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc
Q 010573 191 --LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268 (507)
Q Consensus 191 --~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~ 268 (507)
+|+.. ..+++++++.+...+++++|||+|++|+|+|..+.++|.+|+++++.+++++.+|+++.+.+.+.|++.
T Consensus 182 p~ipG~~----~~~~~~~~~~l~~~~k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~ 257 (499)
T PLN02507 182 PNIPGKE----LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRAVVARNLEGR 257 (499)
T ss_pred CCCCCcc----ceechHHhhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEecCCcCcccCHHHHHHHHHHHHhC
Confidence 34432 235777777777779999999999999999999999999999999999888899999999999999999
Q ss_pred CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCC
Q 010573 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348 (507)
Q Consensus 269 Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~ 348 (507)
||++++++.|++++.+++++.+.+. +++++++|.|++++|++|++..+.++..|++++++|+|.||+++||++||
T Consensus 258 GI~i~~~~~V~~i~~~~~~~~v~~~-----~g~~i~~D~vl~a~G~~pn~~~l~l~~~gl~~~~~G~I~Vd~~~~Ts~p~ 332 (499)
T PLN02507 258 GINLHPRTNLTQLTKTEGGIKVITD-----HGEEFVADVVLFATGRAPNTKRLNLEAVGVELDKAGAVKVDEYSRTNIPS 332 (499)
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEC-----CCcEEEcCEEEEeecCCCCCCCCCchhhCcEECCCCcEecCCCCcCCCCC
Confidence 9999999999999876667666643 45679999999999999999987778889999988999999999999999
Q ss_pred eEEecCCCCCCCcHhHHHHHHHHHHHHHcCCCC-CCCCCCccEEEEcCCCeeeecCCHHHHHHc-CCCEEEEEEecCccc
Q 010573 349 VYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHG-HVDYDKVPGVVYTHPEVASVGKTEEQVKEL-GVEYRVGKFPFLANS 426 (507)
Q Consensus 349 IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~~~~~~~~~~~~~~~ 426 (507)
|||+|||++.+.+++.|.+||++||+||++... ...+..+|+++|+.|++++||+||++|+.. +.++.+...++....
T Consensus 333 IyAiGDv~~~~~l~~~A~~qg~~aa~ni~g~~~~~~~~~~~p~~if~~p~ia~vGlte~ea~~~~~~~~~~~~~~~~~~~ 412 (499)
T PLN02507 333 IWAIGDVTNRINLTPVALMEGTCFAKTVFGGQPTKPDYENVACAVFCIPPLSVVGLSEEEAVEQAKGDILVFTSSFNPMK 412 (499)
T ss_pred EEEeeEcCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCeEEECCCccEEEeCCHHHHHhccCCCEEEEEeecCccc
Confidence 999999999889999999999999999997543 356778899999999999999999999987 688888888887766
Q ss_pred chhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 427 RAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 427 ~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
++.....+++|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++..++
T Consensus 413 ~~~~~~~~~g~~Kli~d~~t~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~ 483 (499)
T PLN02507 413 NTISGRQEKTVMKLIVDAETDKVLGASMCGPDAPEIMQGIAVALKCGATKAQFDSTVGIHPSAAEEFVTMR 483 (499)
T ss_pred cccccCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcCcCCCChHHHHHHHH
Confidence 66555557899999999999999999999999999999999999999999999999999999999998876
No 10
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=5.5e-74 Score=586.59 Aligned_cols=457 Identities=46% Similarity=0.747 Sum_probs=406.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
|...|||+||||||||++||.+|+++|++|+|||+ +.+||+|.+.||+|+|.+....+.+..... ...+|+......+
T Consensus 1 ~~~~ydvvVIG~GpaG~~aA~~aa~~G~~v~lie~-~~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~ 78 (472)
T PRK05976 1 MAKEYDLVIIGGGPGGYVAAIRAGQLGLKTALVEK-GKLGGTCLHKGCIPSKALLHSAEVFQTAKK-ASPFGISVSGPAL 78 (472)
T ss_pred CCccccEEEECCCHHHHHHHHHHHhCCCeEEEEEc-cCCCcceEcCCcCchHHHHHHHHHHHHHHH-HHhcCccCCCCcc
Confidence 34579999999999999999999999999999999 589999999999999999988888776654 4566776555678
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCC-------EEEEEccCCceEEEEeCeEEEccCCCCCCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS-------EVSVDTIEGGNTVVKGKNIIIATGSDVKSLP 192 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~p 192 (507)
+|.++..+++..+..+.......+++.+|+++.+.+.++|.+ .+.|.+.+|+...+.||+||||||++|..+|
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~a~~i~~~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~~p 158 (472)
T PRK05976 79 DFAKVQERKDGIVDRLTKGVAALLKKGKIDVFHGIGRILGPSIFSPMPGTVSVETETGENEMIIPENLLIATGSRPVELP 158 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeCCCCCcCCceEEEEEeCCCceEEEEcCEEEEeCCCCCCCCC
Confidence 999999999999988888888888999999999999999988 8888877775568999999999999997777
Q ss_pred CCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEE
Q 010573 193 GITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (507)
Q Consensus 193 g~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i 272 (507)
+...++..++++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~~G~E~A~~l~~~g~~Vtli~~~~~il~~~~~~~~~~l~~~l~~~gI~i 238 (472)
T PRK05976 159 GLPFDGEYVISSDEALSLETLPKSLVIVGGGVIGLEWASMLADFGVEVTVVEAADRILPTEDAELSKEVARLLKKLGVRV 238 (472)
T ss_pred CCCCCCceEEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccCCcCCHHHHHHHHHHHHhcCCEE
Confidence 76655666888888888777899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCceEEEEEE-cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 273 MLKTKVVGVDL-SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 273 ~~~~~v~~i~~-~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
++++++++++. .++++.+... .+++.+++++|.+++|+|++|++..+.++..++..+ +|+|.||++++|+.|+|||
T Consensus 239 ~~~~~v~~i~~~~~~~~~~~~~--~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~~~~~~-~g~i~Vd~~l~ts~~~IyA 315 (472)
T PRK05976 239 VTGAKVLGLTLKKDGGVLIVAE--HNGEEKTLEADKVLVSVGRRPNTEGIGLENTDIDVE-GGFIQIDDFCQTKERHIYA 315 (472)
T ss_pred EeCcEEEEEEEecCCCEEEEEE--eCCceEEEEeCEEEEeeCCccCCCCCCchhcCceec-CCEEEECCCcccCCCCEEE
Confidence 99999999975 1334433221 123345799999999999999998766667777664 5899999999999999999
Q ss_pred ecCCCCCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhh
Q 010573 352 IGDVIPGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKA 430 (507)
Q Consensus 352 ~GD~a~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (507)
+|||++.+.+++.|..||+.||+||++.. ..+++..+|.++|++|+++++|+++++++..|+++.+..+++....++.+
T Consensus 316 iGD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~ 395 (472)
T PRK05976 316 IGDVIGEPQLAHVAMAEGEMAAEHIAGKKPRPFDYAAIPACCYTDPEVASVGLTEEEAKEAGYDVKVGKFPFAANGKALT 395 (472)
T ss_pred eeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCCEEEECcCceEEEeCCHHHHHHcCCCEEEEEEECCcchhhhh
Confidence 99999888899999999999999999875 55677789999999999999999999999999999999999998888888
Q ss_pred cCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhc
Q 010573 431 IDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATH 501 (507)
Q Consensus 431 ~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~ 501 (507)
.++++||+|+++|+++++|||+|++|+++.|+|+.++.||++++|++||.+++++|||++|++.++++.+.
T Consensus 396 ~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~ 466 (472)
T PRK05976 396 YGESDGFVKVVADRDTHDILGVQAVGPHVTELISEFALALELGARLWEVAGTIHPHPTLSEAIQEAALAAD 466 (472)
T ss_pred cCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcccCCChHHHHHHHHHHhh
Confidence 88889999999999999999999999999999999999999999999999999999999999999988653
No 11
>PRK06370 mercuric reductase; Validated
Probab=100.00 E-value=3.5e-74 Score=587.15 Aligned_cols=454 Identities=35% Similarity=0.562 Sum_probs=401.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccC-ccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVE 118 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~ 118 (507)
|+.+|||+||||||||++||.+|++.|++|+|||+ ..+||+|.+.||+|+|.++.....+..... ...+|+... ...
T Consensus 2 ~~~~~DvvVIG~GpaG~~aA~~aa~~G~~v~lie~-~~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~ 79 (463)
T PRK06370 2 PAQRYDAIVIGAGQAGPPLAARAAGLGMKVALIER-GLLGGTCVNTGCVPTKTLIASARAAHLARR-AAEYGVSVGGPVS 79 (463)
T ss_pred CCccccEEEECCCHHHHHHHHHHHhCCCeEEEEec-CccCCceeccccCcHHHHHHHHHHHHHHHH-HHhcCcccCccCc
Confidence 44569999999999999999999999999999998 589999999999999999988887776554 355677643 357
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccC
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITID 197 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~ 197 (507)
++|..+..+.+....++...+..++++. +|+++.+++.+++.+.+.+ ++ .++.||+||||||++|..++....+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~g~~~~~~~~~v~v---~~--~~~~~d~lViATGs~p~~p~i~G~~ 154 (463)
T PRK06370 80 VDFKAVMARKRRIRARSRHGSEQWLRGLEGVDVFRGHARFESPNTVRV---GG--ETLRAKRIFINTGARAAIPPIPGLD 154 (463)
T ss_pred cCHHHHHHHHHHHHHHHHHhHHHHHhcCCCcEEEEEEEEEccCCEEEE---Cc--EEEEeCEEEEcCCCCCCCCCCCCCC
Confidence 8999999999988888777788888887 9999999988888877766 34 5799999999999998543322233
Q ss_pred CceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCce
Q 010573 198 EKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
...+++..+.......+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 234 (463)
T PRK06370 155 EVGYLTNETIFSLDELPEHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGPRLLPREDEDVAAAVREILEREGIDVRLNAE 234 (463)
T ss_pred cCceEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCE
Confidence 45678888887777779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 278 v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
+.+++.+++++.+.+.. ++++.++++|.||+|+|++|+++.+.++..|++++++|+|.||+++||++|||||+|||++
T Consensus 235 V~~i~~~~~~~~v~~~~--~~~~~~i~~D~Vi~A~G~~pn~~~l~l~~~g~~~~~~G~i~vd~~l~t~~~~IyAiGD~~~ 312 (463)
T PRK06370 235 CIRVERDGDGIAVGLDC--NGGAPEITGSHILVAVGRVPNTDDLGLEAAGVETDARGYIKVDDQLRTTNPGIYAAGDCNG 312 (463)
T ss_pred EEEEEEcCCEEEEEEEe--CCCceEEEeCEEEECcCCCcCCCCcCchhhCceECCCCcEeECcCCcCCCCCEEEeeecCC
Confidence 99998776666555432 1234679999999999999999866678889999999999999999999999999999999
Q ss_pred CCCcHhHHHHHHHHHHHHHcCC-CCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcce
Q 010573 358 GPMLAHKAEEDGVACVEFLAGK-HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEG 436 (507)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (507)
.+.+++.|.+||++||+||++. ...+++..+|+++|++|+++++|+||++|++.|+++.+..+++....++...++++|
T Consensus 313 ~~~~~~~A~~~g~~aa~ni~~~~~~~~~~~~~p~~~~~~p~ia~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g 392 (463)
T PRK06370 313 RGAFTHTAYNDARIVAANLLDGGRRKVSDRIVPYATYTDPPLARVGMTEAEARKSGRRVLVGTRPMTRVGRAVEKGETQG 392 (463)
T ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCcccccCCeEEEcCCCcEeeeCCHHHHHHcCCCeEEEEEecCcchhHHhcCCCCE
Confidence 9999999999999999999975 555778889999999999999999999999999999999999998888877777889
Q ss_pred EEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhcc
Q 010573 437 IVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHD 502 (507)
Q Consensus 437 ~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~ 502 (507)
|+|+++|+++++|||+|++|+++.|+|+.++.||++++|++||.+++++|||++|++.++++.+..
T Consensus 393 ~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~~ 458 (463)
T PRK06370 393 FMKVVVDADTDRILGATILGVHGDEMIHEILDAMYAGAPYTTLSRAIHIHPTVSELIPTLAQALRR 458 (463)
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcccCCChHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999987654
No 12
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria.
Probab=100.00 E-value=2.1e-74 Score=585.03 Aligned_cols=440 Identities=30% Similarity=0.502 Sum_probs=394.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+||||||||++||..++++|++|+|||+ +.+||+|.+.||+|+|.++.....++.+.+ ...+|+......++|.
T Consensus 2 ~yDvvVIG~GpaG~~aA~~aa~~G~~V~lie~-~~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~~~~ 79 (446)
T TIGR01424 2 DYDLFVIGAGSGGVRAARLAANHGAKVAIAEE-PRVGGTCVIRGCVPKKLMVYGSTFGGEFED-AAGYGWTVGKARFDWK 79 (446)
T ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEec-CccCceeecCCcCchHHHHHHHHHHHHHhh-hHhcCcCCCCCCcCHH
Confidence 58999999999999999999999999999999 689999999999999999988888766544 4667776666678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccCCce
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITIDEKR 200 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~~~ 200 (507)
++..+.+..+..+...++..+++.+++++.+++.+++++.+.+. .+| ..+.||+||||||++|.. +||.. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~v~~~~v~v~-~~g--~~~~~d~lIiATGs~p~~p~i~G~~----~ 152 (446)
T TIGR01424 80 KLLQKKDDEIARLSGLYKRLLANAGVELLEGRARLVGPNTVEVL-QDG--TTYTAKKILIAVGGRPQKPNLPGHE----L 152 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecCCEEEEe-cCC--eEEEcCEEEEecCCcCCCCCCCCcc----c
Confidence 99999999999998888899999999999999999998877775 344 679999999999999853 34432 2
Q ss_pred EecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 201 ~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.+++.+.+.+...+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++.+++++.+.+.+.|++.||++++++.+++
T Consensus 153 ~~~~~~~~~l~~~~~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gV~i~~~~~v~~ 232 (446)
T TIGR01424 153 GITSNEAFHLPTLPKSILILGGGYIAVEFAGIWRGLGVQVTLIYRGELILRGFDDDMRALLARNMEGRGIRIHPQTSLTS 232 (446)
T ss_pred eechHHhhcccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEeCCCCCcccCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 45667777777779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~ 360 (507)
++.+++++.+++. +++++++|.|++|+|++|+++.+.++..|++++++|+|.||+++||++|||||+|||++.+.
T Consensus 233 i~~~~~~~~v~~~-----~g~~i~~D~viva~G~~pn~~~l~l~~~g~~~~~~G~i~vd~~~~Ts~~~IyA~GD~~~~~~ 307 (446)
T TIGR01424 233 ITKTDDGLKVTLS-----HGEEIVADVVLFATGRSPNTKGLGLEAAGVELNDAGAIAVDEYSRTSIPSIYAVGDVTDRIN 307 (446)
T ss_pred EEEcCCeEEEEEc-----CCcEeecCEEEEeeCCCcCCCcCCccccCeEECCCCcEEeCCCCccCCCCEEEeeccCCCcc
Confidence 9876666666654 45689999999999999999877678899999989999999999999999999999999889
Q ss_pred cHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcC-CCEEEEEEecCcccchhhcCCcceEE
Q 010573 361 LAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELG-VEYRVGKFPFLANSRAKAIDDAEGIV 438 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (507)
+++.|.+||++||+||++.. .++++..+|+++|+.|+++++|+||++|+..+ +++.+...++....++...+.++||+
T Consensus 308 l~~~A~~~g~~~a~~i~~~~~~~~~~~~~p~~if~~p~ia~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 387 (446)
T TIGR01424 308 LTPVAIMEATCFANTEFGNNPTKFDHDLIATAVFSQPPLGTVGLTEEEAREKFTGDILVYRAGFRPMKNTFSGRQEKTLM 387 (446)
T ss_pred chhHHHHHHHHHHHHHhcCCCCccCcCCCCeEEeCCchhEEEECCHHHHHhhcCCCEEEEEEecCchHhHhhcCCCceEE
Confidence 99999999999999999754 45778899999999999999999999999984 89998888887777776667778999
Q ss_pred EEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHH
Q 010573 439 KILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEA 496 (507)
Q Consensus 439 k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~ 496 (507)
|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++
T Consensus 388 kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 445 (446)
T TIGR01424 388 KLVVDEKDDKVLGAHMVGPDAAEIIQGIAIALKMGATKADFDSTVGIHPSSAEEFVTM 445 (446)
T ss_pred EEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCChHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999998764
No 13
>PRK07846 mycothione reductase; Reviewed
Probab=100.00 E-value=1.8e-74 Score=584.01 Aligned_cols=444 Identities=30% Similarity=0.506 Sum_probs=390.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+||++||||||+|.+||..+ .|.+|+|||+ +.+||+|+|.||+|+|.++..+..++...+ ...+|+......++|.
T Consensus 1 ~yD~vVIG~G~~g~~aa~~~--~G~~V~lie~-~~~GGtC~n~GCiPsK~l~~~a~~~~~~~~-~~~~g~~~~~~~~~~~ 76 (451)
T PRK07846 1 HYDLIIIGTGSGNSILDERF--ADKRIAIVEK-GTFGGTCLNVGCIPTKMFVYAADVARTIRE-AARLGVDAELDGVRWP 76 (451)
T ss_pred CCCEEEECCCHHHHHHHHHH--CCCeEEEEeC-CCCCCcccCcCcchhHHHHHHHHHHHHHHH-HHhCCccCCCCcCCHH
Confidence 38999999999999998764 5999999998 689999999999999999999888876654 4567776555678999
Q ss_pred HHHHHHHHHHHHHHHH-HHHH-HHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCce
Q 010573 123 AMMAQKDKAVSNLTRG-IEGL-FKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~ 200 (507)
++..+.+..++++... ...+ ++..+++++.+++.+++++.+.+ .+| +.+.||+||||||++|..++........
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~V~v--~~g--~~~~~d~lViATGs~p~~p~i~g~~~~~ 152 (451)
T PRK07846 77 DIVSRVFGRIDPIAAGGEEYRGRDTPNIDVYRGHARFIGPKTLRT--GDG--EEITADQVVIAAGSRPVIPPVIADSGVR 152 (451)
T ss_pred HHHHHHHHHHHHHhccchhhhhhhhCCcEEEEEEEEEecCCEEEE--CCC--CEEEeCEEEEcCCCCCCCCCCCCcCCcc
Confidence 9999999998888653 4455 77889999999999998777666 345 5799999999999999644433223445
Q ss_pred EecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 201 ~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
+++.+++..+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+|+++.+.+.+.+ +.||++++++++++
T Consensus 153 ~~~~~~~~~l~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~~~ll~~~d~~~~~~l~~l~-~~~v~i~~~~~v~~ 231 (451)
T PRK07846 153 YHTSDTIMRLPELPESLVIVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLRHLDDDISERFTELA-SKRWDVRLGRNVVG 231 (451)
T ss_pred EEchHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHH-hcCeEEEeCCEEEE
Confidence 77888888887889999999999999999999999999999999999999999999998887655 56899999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~ 360 (507)
++.+++++.+++. +++++++|.|++|+|++|+++++.++..+++++++|+|.||+++||++|||||+|||++.++
T Consensus 232 i~~~~~~v~v~~~-----~g~~i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~Vd~~~~Ts~p~IyA~GD~~~~~~ 306 (451)
T PRK07846 232 VSQDGSGVTLRLD-----DGSTVEADVLLVATGRVPNGDLLDAAAAGVDVDEDGRVVVDEYQRTSAEGVFALGDVSSPYQ 306 (451)
T ss_pred EEEcCCEEEEEEC-----CCcEeecCEEEEEECCccCccccCchhcCceECCCCcEeECCCcccCCCCEEEEeecCCCcc
Confidence 9877666666653 45689999999999999999987778889999999999999999999999999999999989
Q ss_pred cHhHHHHHHHHHHHHHcCCC--CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEE
Q 010573 361 LAHKAEEDGVACVEFLAGKH--GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIV 438 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~~--~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (507)
+++.|.+||+++++||++.. ...++..+|+++|++|+++++|+||++|+..|+++.+..+++....++...++++||+
T Consensus 307 l~~~A~~~g~~~a~ni~~~~~~~~~~~~~~p~~if~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 386 (451)
T PRK07846 307 LKHVANHEARVVQHNLLHPDDLIASDHRFVPAAVFTHPQIASVGLTENEARAAGLDITVKVQNYGDVAYGWAMEDTTGFV 386 (451)
T ss_pred ChhHHHHHHHHHHHHHcCCCCccccCCCCCCeEEECCCCcEeEeCCHHHHHhcCCCEEEEEEecCcchhhhhCCCCceEE
Confidence 99999999999999999752 3457888999999999999999999999999999999999999888887777788999
Q ss_pred EEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCc-CCCCChHHHHHHHHHHh
Q 010573 439 KILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVC-HAHPTMSEALKEAAMAT 500 (507)
Q Consensus 439 k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~-~~~p~~~~~~~~~~~~~ 500 (507)
|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.++. ++|||++|++.++++.+
T Consensus 387 Kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~hPt~~e~~~~a~~~~ 449 (451)
T PRK07846 387 KLIADRDTGRLLGAHIIGPQASTLIQPLIQAMSFGLDAREMARGQYWIHPALPEVVENALLGL 449 (451)
T ss_pred EEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhCCCccCCcHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999875 69999999999988753
No 14
>PRK06116 glutathione reductase; Validated
Probab=100.00 E-value=2.4e-74 Score=586.66 Aligned_cols=441 Identities=31% Similarity=0.519 Sum_probs=393.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+.+|||+||||||||++||..|+++|++|+|||+ ..+||+|.+.||+|++.++........+......+|+......++
T Consensus 2 ~~~~DvvVIG~GpaG~~aA~~~a~~G~~V~liE~-~~~GG~c~n~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (450)
T PRK06116 2 TKDYDLIVIGGGSGGIASANRAAMYGAKVALIEA-KRLGGTCVNVGCVPKKLMWYGAQIAEAFHDYAPGYGFDVTENKFD 80 (450)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEec-cchhhhhhccCcchHHHHHHHHHHHHHHHhHHHhcCCCCCCCCcC
Confidence 3469999999999999999999999999999999 589999999999999999988877766665445677765556789
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCC--CCCccCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL--PGITIDE 198 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~--pg~~~~~ 198 (507)
|..+..+.+..+.++...+...+.+.+|+++.+++.+++.+.+.+ ++ ..+.||+||||||++|..+ |+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~v~~~~v~~---~g--~~~~~d~lViATGs~p~~p~i~g~---- 151 (450)
T PRK06116 81 WAKLIANRDAYIDRLHGSYRNGLENNGVDLIEGFARFVDAHTVEV---NG--ERYTADHILIATGGRPSIPDIPGA---- 151 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEE---CC--EEEEeCEEEEecCCCCCCCCCCCc----
Confidence 999999998888888888888888999999999999998876666 45 6799999999999998543 332
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..++++.+.+.+...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++.+++++.+.+.+.|++.||+++++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~L~~~GV~i~~~~~V 231 (450)
T PRK06116 152 EYGITSDGFFALEELPKRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGDAPLRGFDPDIRETLVEEMEKKGIRLHTNAVP 231 (450)
T ss_pred ceeEchhHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCccccCHHHHHHHHHHHHHCCcEEECCCEE
Confidence 24667777777777799999999999999999999999999999999998899999999999999999999999999999
Q ss_pred EEEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 279 VGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 279 ~~i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
++++.++++ +.+.+. +++++++|.|++|+|++|+++.+.++..+++++++|+|.||+++||++|||||+|||++
T Consensus 232 ~~i~~~~~g~~~v~~~-----~g~~i~~D~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~Ts~~~IyA~GD~~~ 306 (450)
T PRK06116 232 KAVEKNADGSLTLTLE-----DGETLTVDCLIWAIGREPNTDGLGLENAGVKLNEKGYIIVDEYQNTNVPGIYAVGDVTG 306 (450)
T ss_pred EEEEEcCCceEEEEEc-----CCcEEEeCEEEEeeCCCcCCCCCCchhcCceECCCCcEecCCCCCcCCCCEEEEeecCC
Confidence 999876554 556654 34679999999999999999977678889999999999999999999999999999998
Q ss_pred CCCcHhHHHHHHHHHHHHHcCCCC--CCCCCCccEEEEcCCCeeeecCCHHHHHHcCCC--EEEEEEecCcccchhhcCC
Q 010573 358 GPMLAHKAEEDGVACVEFLAGKHG--HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVE--YRVGKFPFLANSRAKAIDD 433 (507)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~~~--~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 433 (507)
.+.+++.|.+||+.||+||++... ..++..+|+++|+.|++++||+||++|++.+.+ +.+...++....++...++
T Consensus 307 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~if~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (450)
T PRK06116 307 RVELTPVAIAAGRRLSERLFNNKPDEKLDYSNIPTVVFSHPPIGTVGLTEEEAREQYGEDNVKVYRSSFTPMYTALTGHR 386 (450)
T ss_pred CcCcHHHHHHHHHHHHHHHhCCCCCCcCCcCCCCeEEeCCCccEEeeCCHHHHHHhCCCCcEEEEEEecchhHHHHhcCC
Confidence 888999999999999999998543 457889999999999999999999999999887 8888888888888777777
Q ss_pred cceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHH
Q 010573 434 AEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEA 496 (507)
Q Consensus 434 ~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~ 496 (507)
++||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++
T Consensus 387 ~~g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 449 (450)
T PRK06116 387 QPCLMKLVVVGKEEKVVGLHGIGFGADEMIQGFAVAIKMGATKADFDNTVAIHPTAAEEFVTM 449 (450)
T ss_pred CceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcccccCCChHHHHhhc
Confidence 899999999999999999999999999999999999999999999999999999999999765
No 15
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=100.00 E-value=6e-74 Score=583.77 Aligned_cols=451 Identities=32% Similarity=0.541 Sum_probs=405.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccC---ccccC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS---SVEVD 120 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~ 120 (507)
.|++|||+||+|+.||..|+++|.+|+|||++ .+||+|.+.||+|+|.++..+...+...+ ...+|+... ...++
T Consensus 2 ~~vvviG~G~~G~~~a~~~~~~g~~v~~~e~~-~~gG~c~~~gciPsK~l~~~a~~~~~~~~-~~~~g~~~~~~~~~~~~ 79 (466)
T PRK07845 2 TRIVIIGGGPGGYEAALVAAQLGADVTVIERD-GLGGAAVLTDCVPSKTLIATAEVRTELRR-AAELGIRFIDDGEARVD 79 (466)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEEcc-CCCCcccccCCcchHHHHHHHHHHHHHHH-HHhCCcccccCcccccC
Confidence 58999999999999999999999999999984 69999999999999999988877776653 566777542 45789
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEE----ecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCcc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF----ISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITI 196 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~ 196 (507)
|..+..+.+...+.+...+.+.+++.+|+++.+++.+ ++++.+.|.+.+|+...+.||+||||||++|..+|+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~~~~~~~~~~v~V~~~~g~~~~~~~d~lViATGs~p~~~p~~~~ 159 (466)
T PRK07845 80 LPAVNARVKALAAAQSADIRARLEREGVRVIAGRGRLIDPGLGPHRVKVTTADGGEETLDADVVLIATGASPRILPTAEP 159 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEeecccCCCEEEEEeCCCceEEEecCEEEEcCCCCCCCCCCCCC
Confidence 9999999999998888888888999999999999988 778888888777744579999999999999976665443
Q ss_pred CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 010573 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
+...+++..+...+...+++++|||+|.+|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|+++||++++++
T Consensus 160 ~~~~v~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~L~~~gV~i~~~~ 239 (466)
T PRK07845 160 DGERILTWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGVKVTLVSSRDRVLPGEDADAAEVLEEVFARRGMTVLKRS 239 (466)
T ss_pred CCceEEeehhhhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcCCCCCCHHHHHHHHHHHHHCCcEEEcCC
Confidence 45567888888777777999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCC
Q 010573 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a 356 (507)
++++++.+++++.+.+. +++++++|.|++++|++|++..+.+++.|++++++|+|.||+++||++|||||+|||+
T Consensus 240 ~v~~v~~~~~~~~v~~~-----~g~~l~~D~vl~a~G~~pn~~~l~l~~~gl~~~~~G~i~Vd~~~~Ts~~~IyA~GD~~ 314 (466)
T PRK07845 240 RAESVERTGDGVVVTLT-----DGRTVEGSHALMAVGSVPNTAGLGLEEAGVELTPSGHITVDRVSRTSVPGIYAAGDCT 314 (466)
T ss_pred EEEEEEEeCCEEEEEEC-----CCcEEEecEEEEeecCCcCCCCCCchhhCceECCCCcEeECCCcccCCCCEEEEeecc
Confidence 99999876677766654 3468999999999999999997767888999999999999999999999999999999
Q ss_pred CCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcc
Q 010573 357 PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAE 435 (507)
Q Consensus 357 ~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (507)
+.+++++.|..||++|+.|+++.. ...++..+|..+|++|++++||+|+++|+..|+++.+..+++....++.+.+.++
T Consensus 315 ~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~vf~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 394 (466)
T PRK07845 315 GVLPLASVAAMQGRIAMYHALGEAVSPLRLKTVASNVFTRPEIATVGVSQAAIDSGEVPARTVMLPLATNPRAKMSGLRD 394 (466)
T ss_pred CCccchhHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEeCCCcceeecCCHHHHHhCCCceEEEEEecccCchhhhcCCCc
Confidence 999999999999999999999864 4467888999999999999999999999999999999999998888888777889
Q ss_pred eEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhc
Q 010573 436 GIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATH 501 (507)
Q Consensus 436 ~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~ 501 (507)
||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++...
T Consensus 395 g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~ 460 (466)
T PRK07845 395 GFVKLFCRPGTGVVIGGVVVAPRASELILPIALAVQNRLTVDDLAQTFTVYPSLSGSITEAARRLM 460 (466)
T ss_pred eEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcCcCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999887643
No 16
>TIGR01423 trypano_reduc trypanothione-disulfide reductase. Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Probab=100.00 E-value=3.7e-74 Score=583.02 Aligned_cols=446 Identities=31% Similarity=0.507 Sum_probs=386.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecC--------CCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKR--------GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~--------~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~ 112 (507)
.+|||+||||||+|+.||..++++ |.+|+|||++ +.+||+|+|.||+|+|.+++.+..++...+ ...+|+
T Consensus 2 ~~~DviVIG~G~~G~~aA~~aa~~~g~~V~lie~~~~~~~~~~~~~GGtCln~GCiPsK~l~~~a~~~~~~~~-~~~~gi 80 (486)
T TIGR01423 2 KAFDLVVIGAGSGGLEAGWNAATLYKKRVAVIDVQTHHGPPHYAALGGTCVNVGCVPKKLMVTGAQYMDTLRE-SAGFGW 80 (486)
T ss_pred CccCEEEECCChHHHHHHHHHHHhcCCEEEEEecccCccccccCCccCeecCcCCccHHHHHHHHHHHHHHHH-hhccCe
Confidence 469999999999999999999997 9999999984 579999999999999999999988776664 355677
Q ss_pred ccC--ccccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEecCCEEEEEccC-C---ceEEEEeCeEEEccC
Q 010573 113 KFS--SVEVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFISPSEVSVDTIE-G---GNTVVKGKNIIIATG 185 (507)
Q Consensus 113 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~d~~~~~v~~~~-g---~~~~~~~d~lvlAtG 185 (507)
... ...++|.++..+++..+..+...+..++++ .+|+++.|.+.+++++.+.|.... + ..+.+.||+||||||
T Consensus 81 ~~~~~~~~~d~~~~~~~~~~~v~~~~~~~~~~l~~~~gv~~i~G~a~f~~~~~v~V~~~~~~~~~~~~~~~~d~lIIATG 160 (486)
T TIGR01423 81 EFDRSSVKANWKALIAAKNKAVLDINKSYEGMFADTEGLTFFLGWGALEDKNVVLVRESADPKSAVKERLQAEHILLATG 160 (486)
T ss_pred eccCCccccCHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEEEEccCCEEEEeeccCCCCCcceEEECCEEEEecC
Confidence 532 456899999999999999998888888887 599999999999999998886421 1 136899999999999
Q ss_pred CCCCC--CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhc---CCeeEEEcccCccCCCCCHHHHHH
Q 010573 186 SDVKS--LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVEFAADIVPSMDGEIRKQ 260 (507)
Q Consensus 186 ~~p~~--~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~~~~~d~~~~~~ 260 (507)
++|.. +||.+ .++++++++.+...+++++|||+|++|+|+|..+..+ |.+||++++.+++++.+|+++.+.
T Consensus 161 s~p~~p~i~G~~----~~~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~~~~l~~~G~~Vtli~~~~~il~~~d~~~~~~ 236 (486)
T TIGR01423 161 SWPQMLGIPGIE----HCISSNEAFYLDEPPRRVLTVGGGFISVEFAGIFNAYKPRGGKVTLCYRNNMILRGFDSTLRKE 236 (486)
T ss_pred CCCCCCCCCChh----heechhhhhccccCCCeEEEECCCHHHHHHHHHHHHhccCCCeEEEEecCCccccccCHHHHHH
Confidence 99853 34432 3567777777777799999999999999999887665 999999999999999999999999
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVN 339 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd 339 (507)
+.+.|++.||++++++.+++++.++++ ..+.+. +++++++|.|++|+|++|++..+.++..+++++++|+|.||
T Consensus 237 l~~~L~~~GI~i~~~~~v~~i~~~~~~~~~v~~~-----~g~~i~~D~vl~a~G~~Pn~~~l~l~~~gl~~~~~G~I~Vd 311 (486)
T TIGR01423 237 LTKQLRANGINIMTNENPAKVTLNADGSKHVTFE-----SGKTLDVDVVMMAIGRVPRTQTLQLDKVGVELTKKGAIQVD 311 (486)
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCceEEEEEc-----CCCEEEcCEEEEeeCCCcCcccCCchhhCceECCCCCEecC
Confidence 999999999999999999999865443 455553 34579999999999999999987778899999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEE
Q 010573 340 ERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVG 418 (507)
Q Consensus 340 ~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 418 (507)
+++||++|||||+|||++.+++++.|.+||++||+||++.. ...++..+|+++|+.|++++||+||++|++.+.++.+.
T Consensus 312 ~~l~Ts~~~IyA~GDv~~~~~l~~~A~~qG~~aa~ni~g~~~~~~~~~~vp~~vft~peia~vGlte~eA~~~~~~~~~~ 391 (486)
T TIGR01423 312 EFSRTNVPNIYAIGDVTDRVMLTPVAINEGAAFVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLVEEDAAKKFEKVAVY 391 (486)
T ss_pred CCCcCCCCCEEEeeecCCCcccHHHHHHHHHHHHHHHhCCCCcccCCCCCCEEEeCCCceEEeeCCHHHHHhcCCceEEE
Confidence 99999999999999999999999999999999999999864 34577789999999999999999999999887777777
Q ss_pred EEecCcccchhhcC-CcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 419 KFPFLANSRAKAID-DAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 419 ~~~~~~~~~~~~~~-~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
..++....+..... ...+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++.
T Consensus 392 ~~~~~~~~~~~~~~~~~~g~~Klv~d~~~~~iLGa~ivg~~a~elI~~~~~ai~~~~t~~dl~~~~~~hPt~sE~~~~~~ 471 (486)
T TIGR01423 392 ESSFTPLMHNISGSKYKKFVAKIVTNHADGTVLGVHLLGDSSPEIIQAVGICLKLNAKISDFYNTIGVHPTSAEELCSMR 471 (486)
T ss_pred EEeeCchhhhhccCccCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhcccCCCCcHHHHHhhc
Confidence 66665544433211 13689999999999999999999999999999999999999999999999999999999998885
No 17
>PTZ00153 lipoamide dehydrogenase; Provisional
Probab=100.00 E-value=4.4e-74 Score=594.01 Aligned_cols=459 Identities=35% Similarity=0.545 Sum_probs=397.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC-CCCCceeccccccchhhhhhhhHHHHHHHhh--hhhCCcc----
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-GALGGTCLNVGCIPSKALLHSSHMYHEAMHS--FASHGVK---- 113 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~g~~---- 113 (507)
..+|||+|||+||+|+.||.++++.|.+|+|||+. ..+||+|.+.||+|+|.++..+..++.+.+. ...+|+.
T Consensus 114 ~~~yDviVIG~G~gG~~aA~~aa~~G~kV~lie~~~~~lGGtCvn~GCiPsK~l~~~a~~~~~~~~~~~~~~~Gi~~~~~ 193 (659)
T PTZ00153 114 DEEYDVGIIGCGVGGHAAAINAMERGLKVIIFTGDDDSIGGTCVNVGCIPSKALLYATGKYRELKNLAKLYTYGIYTNAF 193 (659)
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccccceeEeCCcchHHHHHHHHHHHHHHhccccccCCeeeccc
Confidence 34799999999999999999999999999999973 4799999999999999999999988877653 2345664
Q ss_pred -------------c-CccccChHHHHHHHHHHHHHHHHHHHHHHHhCC-------cEEEEeEEEEecCCEEEEEccCCce
Q 010573 114 -------------F-SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNK-------VTYVKGYGKFISPSEVSVDTIEGGN 172 (507)
Q Consensus 114 -------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~d~~~~~v~~~~g~~ 172 (507)
. ....++|.++..+.+..+..+...+...+++.+ ++++.+.+.+++++.+.+. .++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~vi~G~a~f~~~~~v~v~-~~g-- 270 (659)
T PTZ00153 194 KNGKNDPVERNQLVADTVQIDITKLKEYTQSVIDKLRGGIENGLKSKKFCKNSEHVQVIYERGHIVDKNTIKSE-KSG-- 270 (659)
T ss_pred cccccccccccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCceEEEEeEEEEecCCeEEEc-cCC--
Confidence 1 335679999999999999999888888888765 8999999999999988775 344
Q ss_pred EEEEeCeEEEccCCCCCCCCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC
Q 010573 173 TVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS 252 (507)
Q Consensus 173 ~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 252 (507)
.++.||+||||||++|..+++...+...++++++++.+...+++++|||+|++|+|+|..|.++|.+||++++.+++++.
T Consensus 271 ~~i~ad~lIIATGS~P~~P~~~~~~~~~V~ts~d~~~l~~lpk~VvIVGgG~iGvE~A~~l~~~G~eVTLIe~~~~ll~~ 350 (659)
T PTZ00153 271 KEFKVKNIIIATGSTPNIPDNIEVDQKSVFTSDTAVKLEGLQNYMGIVGMGIIGLEFMDIYTALGSEVVSFEYSPQLLPL 350 (659)
T ss_pred EEEECCEEEEcCCCCCCCCCCCCCCCCcEEehHHhhhhhhcCCceEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccc
Confidence 67999999999999997665555556678899998888888999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHH-HhcCcEEEcCceEEEEEEcCCe--EEEEEeecCCC----------ceEEEEcCEEEEeecCCCCCC
Q 010573 253 MDGEIRKQFQRSL-EKQKMKFMLKTKVVGVDLSGDG--VKLTLEPAAGG----------EKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 253 ~d~~~~~~~~~~l-~~~Gv~i~~~~~v~~i~~~~~~--v~v~~~~~~~g----------~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+|+++.+.+.+.+ ++.||++++++.|++++.+++. +.+.+.+..++ +.+++++|.|++|+|++||++
T Consensus 351 ~d~eis~~l~~~ll~~~GV~I~~~~~V~~I~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~i~aD~VlvAtGr~Pnt~ 430 (659)
T PTZ00153 351 LDADVAKYFERVFLKSKPVRVHLNTLIEYVRAGKGNQPVIIGHSERQTGESDGPKKNMNDIKETYVDSCLVATGRKPNTN 430 (659)
T ss_pred CCHHHHHHHHHHHhhcCCcEEEcCCEEEEEEecCCceEEEEEEeccccccccccccccccceEEEcCEEEEEECcccCCc
Confidence 9999999998876 6799999999999999866543 55544321111 124799999999999999999
Q ss_pred CCCCcccCceecCCCCeecCCCCCCC------CCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCC-------------C
Q 010573 320 GLGLDKIGVETDKMGRIPVNERFATN------IPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK-------------H 380 (507)
Q Consensus 320 ~l~~~~~gl~~~~~G~i~Vd~~~~t~------~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~-------------~ 380 (507)
.+.++..++++++ |+|.||++|||+ +|+|||+|||++.+++++.|.+||++|++||++. .
T Consensus 431 ~L~l~~~gi~~~~-G~I~VDe~lqTs~~~~~~v~~IYAiGDv~g~~~La~~A~~qg~~aa~ni~g~~~~~~~~~~~~~~~ 509 (659)
T PTZ00153 431 NLGLDKLKIQMKR-GFVSVDEHLRVLREDQEVYDNIFCIGDANGKQMLAHTASHQALKVVDWIEGKGKENVNINVENWAS 509 (659)
T ss_pred cCCchhcCCcccC-CEEeECCCCCcCCCCCCCCCCEEEEEecCCCccCHHHHHHHHHHHHHHHcCCCccccccccccccc
Confidence 8877888888865 899999999997 6999999999999999999999999999999986 4
Q ss_pred CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCC--CEEEEEEecCcccchhhcCC----------------------cce
Q 010573 381 GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGV--EYRVGKFPFLANSRAKAIDD----------------------AEG 436 (507)
Q Consensus 381 ~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----------------------~~~ 436 (507)
..++|..+|.++|++|++++||+||++|++.+. ++.+...++....++...++ ++|
T Consensus 510 ~~~~~~~iP~~ift~PeiA~VGlTE~eA~~~g~~~~v~v~~~~~~~~~ra~~~~~~~~p~~~~~~~y~~g~~~~~~~~~G 589 (659)
T PTZ00153 510 KPIIYKNIPSVCYTTPELAFIGLTEKEAKELYPPDNVGVEISFYKANSKVLCENNISFPNNSKNNSYNKGKYNTVDNTEG 589 (659)
T ss_pred cccccCcCCEEEECcCceEEeeCCHHHHHhcCCCcceEEEEEEecccchhhhccccccccccccccccccccccccCCce
Confidence 456788999999999999999999999999884 46666677777777655443 789
Q ss_pred EEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccC
Q 010573 437 IVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDK 503 (507)
Q Consensus 437 ~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~ 503 (507)
|+|+++++++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++..+++++...
T Consensus 590 ~vKli~d~~t~rILGa~ivG~~A~elI~~~a~aI~~~~tv~dl~~~~~~hPT~sE~~~~a~~~~~~~ 656 (659)
T PTZ00153 590 MVKIVYLKDTKEILGMFIVGSYASILIHEGVLAINLKLSVKDLAHMVHSHPTISEVLDAAFKAIAGV 656 (659)
T ss_pred EEEEEEECCCCeEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999887653
No 18
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=100.00 E-value=4.9e-74 Score=581.29 Aligned_cols=441 Identities=31% Similarity=0.496 Sum_probs=387.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccC-ccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 121 (507)
.|||+||||||||++||..|++.|++|+|||+ +.+||+|.+.||+|+|.++.....+..+.+ ...+|+... ...++|
T Consensus 2 ~yDvvVIG~GpaG~~aA~~aa~~G~~V~liE~-~~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~~~~ 79 (450)
T TIGR01421 2 HYDYLVIGGGSGGIASARRAAEHGAKALLVEA-KKLGGTCVNVGCVPKKVMWYASDLAERMHD-AADYGFYQNLENTFNW 79 (450)
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEecc-cccccceeccCcCccHHHHHHHHHHHHHhH-HhhcCcccCCcCccCH
Confidence 58999999999999999999999999999999 579999999999999999988888776653 466676543 235899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
.++..+.+..++.+...+...+++.+|+++.+++.+.+.+.+.+ ++ ..+.||+||||||++|..++..+. ....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~~~~v~v---~~--~~~~~d~vIiAtGs~p~~p~~i~g-~~~~ 153 (450)
T TIGR01421 80 PELKEKRDAYVDRLNGIYQKNLEKNKVDVIFGHARFTKDGTVEV---NG--RDYTAPHILIATGGKPSFPENIPG-AELG 153 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEE---CC--EEEEeCEEEEecCCCCCCCCCCCC-Ccee
Confidence 99999999999999888888899999999999998888776655 34 579999999999999854412221 1123
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+++++.+.+...+++++|||+|++|+|+|..|+++|++||++++.+++++.+|+++.+.+.+.|++.||++++++.++++
T Consensus 154 ~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~il~~~d~~~~~~~~~~l~~~gI~i~~~~~v~~i 233 (450)
T TIGR01421 154 TDSDGFFALEELPKRVVIVGAGYIAVELAGVLHGLGSETHLVIRHERVLRSFDSMISETITEEYEKEGINVHKLSKPVKV 233 (450)
T ss_pred EcHHHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCcccCHHHHHHHHHHHHHcCCEEEcCCEEEEE
Confidence 56777777777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCe-EEEEEeecCCCce-EEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCC
Q 010573 282 DLSGDG-VKLTLEPAAGGEK-TILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359 (507)
Q Consensus 282 ~~~~~~-v~v~~~~~~~g~~-~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~ 359 (507)
+.++++ +.+++. ++ +.+++|.|++++|++|+++.+.++..+++++++|+|.||+++||++|||||+|||++.+
T Consensus 234 ~~~~~~~~~v~~~-----~g~~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~G~i~vd~~~~T~~p~IyAiGD~~~~~ 308 (450)
T TIGR01421 234 EKTVEGKLVIHFE-----DGKSIDDVDELIWAIGRKPNTKGLGLENVGIKLNEKGQIIVDEYQNTNVPGIYALGDVVGKV 308 (450)
T ss_pred EEeCCceEEEEEC-----CCcEEEEcCEEEEeeCCCcCcccCCccccCcEECCCCcEEeCCCCcCCCCCEEEEEecCCCc
Confidence 865443 556553 23 57999999999999999998777889999999999999999999999999999999999
Q ss_pred CcHhHHHHHHHHHHHHHcCCC--CCCCCCCccEEEEcCCCeeeecCCHHHHHHc-CCC-EEEEEEecCcccchhhcCCcc
Q 010573 360 MLAHKAEEDGVACVEFLAGKH--GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-GVE-YRVGKFPFLANSRAKAIDDAE 435 (507)
Q Consensus 360 ~~~~~A~~~g~~aa~~i~~~~--~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 435 (507)
.+++.|.+||+.||+||++.. ...++..+|+++|++|++++||+||++|++. +++ +.+...++....++...+.++
T Consensus 309 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~f~~p~ia~vGlte~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 388 (450)
T TIGR01421 309 ELTPVAIAAGRKLSERLFNGKTDDKLDYNNVPTVVFSHPPIGTIGLTEKEAIEKYGKENIKVYNSSFTPMYYAMTSEKQK 388 (450)
T ss_pred ccHHHHHHHHHHHHHHHhcCCCCCccCcccCCeEEeCCCceEEEeCCHHHHHhhcCCCCEEEEEEEcChhHHHHhcCCCc
Confidence 999999999999999999643 3457889999999999999999999999876 664 888888888777777777889
Q ss_pred eEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHH
Q 010573 436 GIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEA 496 (507)
Q Consensus 436 ~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~ 496 (507)
||+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++++|||++|+|.++
T Consensus 389 g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 449 (450)
T TIGR01421 389 CRMKLVCAGKEEKVVGLHGIGDGVDEMLQGFAVAIKMGATKADFDNTVAIHPTSSEELVTM 449 (450)
T ss_pred eEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999998764
No 19
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=1.7e-73 Score=580.29 Aligned_cols=454 Identities=38% Similarity=0.639 Sum_probs=404.6
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccC--ccccChH
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS--SVEVDLP 122 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~ 122 (507)
+|+||||||||++||.+|++.|++|+|||+ ..+||+|.+.||+|+|.+++....++.... ...+|+... ....+|.
T Consensus 2 ~vvVIG~G~aG~~aA~~~~~~g~~V~lie~-~~~GG~c~n~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~~~~~~ 79 (458)
T PRK06912 2 KLVVIGGGPAGYVAAITAAQNGKNVTLIDE-ADLGGTCLNEGCMPTKSLLESAEVHDKVKK-ANHFGITLPNGSISIDWK 79 (458)
T ss_pred eEEEECCCHHHHHHHHHHHhCCCcEEEEEC-CcccccCCCCccccchHHHHHHHHHHHHHH-HHhcCccccCCCCccCHH
Confidence 799999999999999999999999999999 579999999999999999998888776653 355677542 4578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEe
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~ 202 (507)
++..+.+..++++...++.++++.+++++.+++.+++++.+.|...++ ..++.||+||||||++|..+|....+...++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~~-~~~~~~d~lviATGs~p~~~p~~~~~~~~v~ 158 (458)
T PRK06912 80 QMQARKSQIVTQLVQGIQYLMKKNKIKVIQGKASFETDHRVRVEYGDK-EEVVDAEQFIIAAGSEPTELPFAPFDGKWII 158 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEccCCEEEEeeCCC-cEEEECCEEEEeCCCCCCCCCCCCCCCCeEE
Confidence 999999999999888888888999999999999999999998886544 3579999999999999976654444456788
Q ss_pred cchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 203 SSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 203 ~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
++.++..+...+++++|||+|++|+|+|..+.+.|.+|+++++.+++++.+++++.+.+.+.|++.||++++++.+++++
T Consensus 159 ~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~ll~~~d~e~~~~l~~~L~~~GI~i~~~~~V~~i~ 238 (458)
T PRK06912 159 NSKHAMSLPSIPSSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLPGEDEDIAHILREKLENDGVKIFTGAALKGLN 238 (458)
T ss_pred cchHHhCccccCCcEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCccccHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 88888888888999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcH
Q 010573 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLA 362 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~ 362 (507)
.++..+.+.. +++..++++|.|++|+|++|+++.+.++..|++++++| |.||+++||+.|||||+|||++.++++
T Consensus 239 ~~~~~v~~~~----~g~~~~i~~D~vivA~G~~p~~~~l~l~~~gv~~~~~g-i~Vd~~~~ts~~~VyA~GD~~~~~~la 313 (458)
T PRK06912 239 SYKKQALFEY----EGSIQEVNAEFVLVSVGRKPRVQQLNLEKAGVQFSNKG-ISVNEHMQTNVPHIYACGDVIGGIQLA 313 (458)
T ss_pred EcCCEEEEEE----CCceEEEEeCEEEEecCCccCCCCCCchhcCceecCCC-EEeCCCeecCCCCEEEEeecCCCcccH
Confidence 6655444432 22335799999999999999998776778889888766 999999999999999999999989999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEEE
Q 010573 363 HKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILA 442 (507)
Q Consensus 363 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 442 (507)
+.|.+||++||.|+++.....++..+|.++|++|++++||+|+++|+..++++.+..+++....++...+++.||+||++
T Consensus 314 ~~A~~~g~~aa~~~~g~~~~~~~~~~p~~v~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kli~ 393 (458)
T PRK06912 314 HVAFHEGTTAALHASGEDVKVNYHAVPRCIYTSPEIASVGLTEKQAREQYGDIRIGEFPFTANGKALIIGEQTGKVKVIV 393 (458)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcCCCCeEEecCchhEEeeCCHHHHHHCCCCeEEEEEecCcchhHhhcCCCceEEEEEE
Confidence 99999999999999987666677889999999999999999999999999999999988988888888888899999999
Q ss_pred ECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 443 EKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 443 ~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++..+.+..|
T Consensus 394 d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 457 (458)
T PRK06912 394 EPKYQEIVGISIIGPRATELIGQGTVMIHTEVTADIMEDFIAAHPTLSEAIHEALLQAVGHAVH 457 (458)
T ss_pred ECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcccCCCHHHHHHHHHHHhhcCcCC
Confidence 9999999999999999999999999999999999999999999999999999998877665443
No 20
>PRK14727 putative mercuric reductase; Provisional
Probab=100.00 E-value=1.2e-73 Score=583.48 Aligned_cols=450 Identities=32% Similarity=0.492 Sum_probs=393.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+||++|||+||||+++|..|++.|.+|+|||+++.+||+|.+.||+|++.++......+.... ....|+......++
T Consensus 14 ~~~~dvvvIG~G~aG~~~a~~~~~~g~~v~~ie~~~~~GG~c~n~GciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~~ 92 (479)
T PRK14727 14 KLQLHVAIIGSGSAAFAAAIKAAEHGARVTIIEGADVIGGCCVNVGCVPSKILIRAAQLAHQQRS-NPFDGVEAVAPSID 92 (479)
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcceeEeccccccccHHHHHHHHHHHHHhh-ccccCcccCCCccC
Confidence 34689999999999999999999999999999998799999999999999999988777665543 23346654455688
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHhC-CcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCcc
Q 010573 121 LPAMMAQKDKAVSNLTR-GIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITI 196 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~ 196 (507)
+..+..+.+..+.++.. .+...++.. +++++.|.+.+.+.+.+.|...+|+..++.||+||||||++|.. +||..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~G~a~f~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~i~G~~- 171 (479)
T PRK14727 93 RGLLLHQQQARVEELRHAKYQSILDGNPALTLLKGYARFKDGNTLVVRLHDGGERVLAADRCLIATGSTPTIPPIPGLM- 171 (479)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhcCCeEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEecCCCCCCCCCCCcC-
Confidence 99999888888777754 356666655 89999999999999999998877755689999999999999854 34432
Q ss_pred CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 010573 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
...+++..+.+.....+++++|||+|++|+|+|..|.+.|.+|+++++. ++++.+|+++.+.+++.+++.||++++++
T Consensus 172 -~~~~~~~~~~l~~~~~~k~vvVIGgG~iG~E~A~~l~~~G~~Vtlv~~~-~~l~~~d~~~~~~l~~~L~~~GV~i~~~~ 249 (479)
T PRK14727 172 -DTPYWTSTEALFSDELPASLTVIGSSVVAAEIAQAYARLGSRVTILARS-TLLFREDPLLGETLTACFEKEGIEVLNNT 249 (479)
T ss_pred -ccceecchHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEcC-CCCCcchHHHHHHHHHHHHhCCCEEEcCc
Confidence 2345666666555566899999999999999999999999999999874 67788999999999999999999999999
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCC
Q 010573 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a 356 (507)
++++++.+++.+.+... + .++++|.|++|+|+.||+..+.++..|++++++|+|.||+++||++|+|||+|||+
T Consensus 250 ~V~~i~~~~~~~~v~~~-----~-g~i~aD~VlvA~G~~pn~~~l~l~~~g~~~~~~G~i~Vd~~~~Ts~~~IyA~GD~~ 323 (479)
T PRK14727 250 QASLVEHDDNGFVLTTG-----H-GELRAEKLLISTGRHANTHDLNLEAVGVTTDTSGAIVVNPAMETSAPDIYAAGDCS 323 (479)
T ss_pred EEEEEEEeCCEEEEEEc-----C-CeEEeCEEEEccCCCCCccCCCchhhCceecCCCCEEECCCeecCCCCEEEeeecC
Confidence 99999876666665542 2 36899999999999999998767888999999999999999999999999999999
Q ss_pred CCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcce
Q 010573 357 PGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEG 436 (507)
Q Consensus 357 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (507)
+.+.+++.|..||+.||.||++....+++..+|.++|++|++++||+|+++|+..|+++.+..+++....++.....+++
T Consensus 324 ~~~~~~~~A~~~G~~aa~~i~g~~~~~~~~~~p~~~~~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g 403 (479)
T PRK14727 324 DLPQFVYVAAAAGSRAGINMTGGNATLDLSAMPAVIFTDPQVATVGLSEAKAHLSGIETISRVLTMENVPRALANFETDG 403 (479)
T ss_pred CcchhhhHHHHHHHHHHHHHcCCCcccccccCCcEEEecCceeeeeCCHHHHHHcCCceEEEEEEcccCchhhhcCCCCe
Confidence 99999999999999999999987767788889999999999999999999999999999999999888888766556789
Q ss_pred EEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh
Q 010573 437 IVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 437 ~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 500 (507)
|+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++..
T Consensus 404 ~~Kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~~~~ 467 (479)
T PRK14727 404 FIKLVAEEGTRKLIGAQILAHEGGELIQSAALAIHNRMTVEELADQLFPYLTMVEGLKLCAQTF 467 (479)
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcCCccCCChHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999998643
No 21
>PRK14694 putative mercuric reductase; Provisional
Probab=100.00 E-value=1.5e-73 Score=582.27 Aligned_cols=450 Identities=31% Similarity=0.541 Sum_probs=392.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
....|||+||||||||++||..|++.|++|+|||+ +.+||+|.+.||+|++.+....+.++.........|+......+
T Consensus 3 ~~~~~dviVIGaG~aG~~aA~~l~~~g~~v~lie~-~~~GGtc~n~GciPsk~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 81 (468)
T PRK14694 3 SDNNLHIAVIGSGGSAMAAALKATERGARVTLIER-GTIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDDGLSAQAPVV 81 (468)
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEEc-cccccceecCCccccHHHHHHHHHHHHHhhccccCCcccCCCcc
Confidence 45679999999999999999999999999999999 57999999999999999988887766444321134665445678
Q ss_pred ChHHHHHHHHHHHHHHHHH-HHHHHHh-CCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCc
Q 010573 120 DLPAMMAQKDKAVSNLTRG-IEGLFKK-NKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~ 195 (507)
+|..+..+.+..+..+... +...++. .+++++.+.+.++|.+.+.|.+.+|+..++.||+||||||++|.. +||..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lViATGs~p~~p~i~G~~ 161 (468)
T PRK14694 82 DRSALLAQQQARVEELRESKYQSILRENAAITVLNGEARFVDERTLTVTLNDGGEQTVHFDRAFIGTGARPAEPPVPGLA 161 (468)
T ss_pred CHHHHHHHHHHHHHHHhcccHHHHHhcCCCeEEEEEEEEEecCCEEEEEecCCCeEEEECCEEEEeCCCCCCCCCCCCCC
Confidence 9999999998888777553 4455654 489999999999999999998887755689999999999999853 45543
Q ss_pred cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcC
Q 010573 196 IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~ 275 (507)
...++++.+...+...+++++|||+|++|+|+|..|.++|.+|+++++ +++++.+++++.+.+++.+++.||+++++
T Consensus 162 --~~~~~~~~~~~~l~~~~~~vvViG~G~~G~E~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~l~~~l~~~GI~v~~~ 238 (468)
T PRK14694 162 --ETPYLTSTSALELDHIPERLLVIGASVVALELAQAFARLGSRVTVLAR-SRVLSQEDPAVGEAIEAAFRREGIEVLKQ 238 (468)
T ss_pred --CCceEcchhhhchhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEC-CCCCCCCCHHHHHHHHHHHHhCCCEEEeC
Confidence 334667777777767789999999999999999999999999999986 56788899999999999999999999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCC
Q 010573 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDV 355 (507)
Q Consensus 276 ~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~ 355 (507)
+.+++++.+++.+.+.+. +.++++|.|++|+|++|++.++.++.++++. ++|+|.||+++||++|+|||+|||
T Consensus 239 ~~v~~i~~~~~~~~v~~~------~~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~-~~G~i~vd~~~~Ts~~~IyA~GD~ 311 (468)
T PRK14694 239 TQASEVDYNGREFILETN------AGTLRAEQLLVATGRTPNTENLNLESIGVET-ERGAIRIDEHLQTTVSGIYAAGDC 311 (468)
T ss_pred CEEEEEEEcCCEEEEEEC------CCEEEeCEEEEccCCCCCcCCCCchhcCccc-CCCeEeeCCCcccCCCCEEEEeec
Confidence 999999876665555432 2369999999999999999986667778886 468999999999999999999999
Q ss_pred CCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcc
Q 010573 356 IPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAE 435 (507)
Q Consensus 356 a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (507)
++.+.+.+.|..||+.||.||++....+++..+|.++|++|++++||+||++|+..|+++.+..+++....++...++++
T Consensus 312 ~~~~~~~~~A~~~G~~aa~~i~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (468)
T PRK14694 312 TDQPQFVYVAAAGGSRAAINMTGGDASLDLSAMPEVIFTDPQVATVGLSEAEAQAQGYDTDSRTLDLENVPRALVNFDTG 391 (468)
T ss_pred CCCcccHHHHHHHHHHHHHHhcCCCcccccCCCCeEEECCCCeEEeeCCHHHHHHcCCceEEEEEecccchhhhhcCCCc
Confidence 99999999999999999999998776778888999999999999999999999999999999999999888887777788
Q ss_pred eEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh
Q 010573 436 GIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 436 ~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 500 (507)
||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++..
T Consensus 392 g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~ 456 (468)
T PRK14694 392 GFIKMVAERGSGRLLGVQVVAGEAGELIQTAVMALRARMTVNEIADELFPYLTMVEGLKLCAQTF 456 (468)
T ss_pred eEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCchHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999888754
No 22
>PLN02546 glutathione reductase
Probab=100.00 E-value=1.2e-73 Score=584.70 Aligned_cols=442 Identities=30% Similarity=0.465 Sum_probs=390.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEec---------CCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK---------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG 111 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~---------~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g 111 (507)
..+|||+|||+||||+.||..|+++|++|+|||+ ...+||+|.|.||+|+|.++.....++.+.+ ...+|
T Consensus 77 ~~~yDvvVIG~GpaG~~aA~~aa~~G~~V~liE~~~~~~~~~~~~~~GGtC~n~GCiPsK~l~~aa~~~~~~~~-~~~~g 155 (558)
T PLN02546 77 HYDFDLFTIGAGSGGVRASRFASNFGASAAVCELPFATISSDTLGGVGGTCVLRGCVPKKLLVYASKYSHEFEE-SRGFG 155 (558)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCccCcccCcchHHHHHHHHHHHHHHHHHh-hhhcC
Confidence 3469999999999999999999999999999996 2568999999999999999988888776554 45677
Q ss_pred cccC-ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 112 VKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 112 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
+... ...+||..+..+++..+.++..++...+++.+|+++.+.+.+++.+.+.+ +| ..+.||+||||||++|..
T Consensus 156 ~~~~~~~~~d~~~~~~~k~~~~~~l~~~~~~~l~~~gV~~i~G~a~~vd~~~V~v---~G--~~~~~D~LVIATGs~p~~ 230 (558)
T PLN02546 156 WKYETEPKHDWNTLIANKNAELQRLTGIYKNILKNAGVTLIEGRGKIVDPHTVDV---DG--KLYTARNILIAVGGRPFI 230 (558)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEccCCEEEE---CC--EEEECCEEEEeCCCCCCC
Confidence 7653 45789999999999999999999999999999999999999999987666 35 679999999999999853
Q ss_pred --CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc
Q 010573 191 --LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268 (507)
Q Consensus 191 --~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~ 268 (507)
+||.. .++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+.+.|+++
T Consensus 231 P~IpG~~----~v~~~~~~l~~~~~~k~V~VIGgG~iGvE~A~~L~~~g~~Vtlv~~~~~il~~~d~~~~~~l~~~L~~~ 306 (558)
T PLN02546 231 PDIPGIE----HAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQKKVLRGFDEEVRDFVAEQMSLR 306 (558)
T ss_pred CCCCChh----hccCHHHHHhccccCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeccccccccCHHHHHHHHHHHHHC
Confidence 44432 356777777777789999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCC
Q 010573 269 KMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIP 347 (507)
Q Consensus 269 Gv~i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~ 347 (507)
||++++++.+++++.+++ .+.+... +++...+|.|++++|++|+++.+.++..|++++++|+|.||+++||++|
T Consensus 307 GV~i~~~~~v~~i~~~~~g~v~v~~~-----~g~~~~~D~Viva~G~~Pnt~~L~le~~gl~~d~~G~I~VD~~l~Ts~p 381 (558)
T PLN02546 307 GIEFHTEESPQAIIKSADGSLSLKTN-----KGTVEGFSHVMFATGRKPNTKNLGLEEVGVKMDKNGAIEVDEYSRTSVP 381 (558)
T ss_pred CcEEEeCCEEEEEEEcCCCEEEEEEC-----CeEEEecCEEEEeeccccCCCcCChhhcCCcCCCCCcEeECCCceeCCC
Confidence 999999999999976433 3444332 3444568999999999999997767888999998899999999999999
Q ss_pred CeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCCC-CCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCccc
Q 010573 348 GVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHG-HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANS 426 (507)
Q Consensus 348 ~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~ 426 (507)
||||+|||++.+++++.|.+||+.+|.||++... ..+|..+|+++|++|++++||+||++|++.++++++...++....
T Consensus 382 ~IYAaGDv~~~~~l~~~A~~~g~~~a~~i~g~~~~~~~~~~vp~~vft~Peia~VGlte~eA~~~g~~~~~~~~~~~~~~ 461 (558)
T PLN02546 382 SIWAVGDVTDRINLTPVALMEGGALAKTLFGNEPTKPDYRAVPSAVFSQPPIGQVGLTEEQAIEEYGDVDVFTANFRPLK 461 (558)
T ss_pred CEEEeeccCCCcccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEeCCchHhhccCCHHHHHHcCCCeEEEEEecccch
Confidence 9999999999999999999999999999998643 356788999999999999999999999999999999888888766
Q ss_pred chhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 427 RAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 427 ~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
+......+++|+|+++|+++++|||+|++|+++.|+|+.++.||++++|++||.+++++|||++|+|..++
T Consensus 462 ~~~~~~~~~g~~Klv~d~~t~~ILGa~ivG~~a~elI~~~a~ai~~~~t~~dl~~~~~~hPT~~E~~~~~~ 532 (558)
T PLN02546 462 ATLSGLPDRVFMKLIVCAKTNKVLGVHMCGEDAPEIIQGFAVAVKAGLTKADFDATVGIHPTAAEEFVTMR 532 (558)
T ss_pred hhhhCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHh
Confidence 55544456899999999999999999999999999999999999999999999999999999999998776
No 23
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=100.00 E-value=1.3e-73 Score=578.56 Aligned_cols=443 Identities=30% Similarity=0.527 Sum_probs=386.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+||++|||+||+|+.||.. ..|.+|+|||+ +.+||+|.|+||+|+|.++..+..++...+ ...+|+......++|.
T Consensus 2 ~yD~vvIG~G~~g~~aa~~--~~g~~V~lie~-~~~GGtC~n~GCiPsK~l~~~a~~~~~~~~-~~~~g~~~~~~~~d~~ 77 (452)
T TIGR03452 2 HYDLIIIGTGSGNSIPDPR--FADKRIAIVEK-GTFGGTCLNVGCIPTKMFVYAAEVAQSIGE-SARLGIDAEIDSVRWP 77 (452)
T ss_pred CcCEEEECCCHHHHHHHHH--HCCCeEEEEeC-CCCCCeeeccCccchHHHHHHHHHHHHHHH-hhccCeeCCCCccCHH
Confidence 5899999999999998654 46999999998 789999999999999999999888876664 4567776444578999
Q ss_pred HHHHHHHH-HHHHHHHHHHHH-H--HhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCC
Q 010573 123 AMMAQKDK-AVSNLTRGIEGL-F--KKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDE 198 (507)
Q Consensus 123 ~~~~~~~~-~~~~~~~~~~~~-~--~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~ 198 (507)
++..++.. ....+....... . ++.+|+++.+++.+.+.+.+.+ .+| .++.||+||||||++|..+|+....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~V~~--~~g--~~~~~d~lIiATGs~p~~p~~~~~~~ 153 (452)
T TIGR03452 78 DIVSRVFGDRIDPIAAGGEDYRRGDETPNIDVYDGHARFVGPRTLRT--GDG--EEITGDQIVIAAGSRPYIPPAIADSG 153 (452)
T ss_pred HHHHHhhhhHhHHHhccchHhhhhcccCCeEEEEEEEEEecCCEEEE--CCC--cEEEeCEEEEEECCCCCCCCCCCCCC
Confidence 99999887 666554432222 2 4479999999999988777665 355 57999999999999997665554444
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..+++.++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+.+.++ .||++++++++
T Consensus 154 ~~~~~~~~~~~l~~~~k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~~ll~~~d~~~~~~l~~~~~-~gI~i~~~~~V 232 (452)
T TIGR03452 154 VRYHTNEDIMRLPELPESLVIVGGGYIAAEFAHVFSALGTRVTIVNRSTKLLRHLDEDISDRFTEIAK-KKWDIRLGRNV 232 (452)
T ss_pred CEEEcHHHHHhhhhcCCcEEEECCCHHHHHHHHHHHhCCCcEEEEEccCccccccCHHHHHHHHHHHh-cCCEEEeCCEE
Confidence 56788888888877899999999999999999999999999999999999988899999988877554 68999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~ 358 (507)
++++.+++++.+++. +++++++|.|++++|++|+++++.++..|++++++|+|.||+++||++|+|||+|||++.
T Consensus 233 ~~i~~~~~~v~v~~~-----~g~~i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~vd~~~~Ts~~~IyA~GD~~~~ 307 (452)
T TIGR03452 233 TAVEQDGDGVTLTLD-----DGSTVTADVLLVATGRVPNGDLLDAEAAGVEVDEDGRIKVDEYGRTSARGVWALGDVSSP 307 (452)
T ss_pred EEEEEcCCeEEEEEc-----CCCEEEcCEEEEeeccCcCCCCcCchhcCeeECCCCcEeeCCCcccCCCCEEEeecccCc
Confidence 999877767666653 345899999999999999999877788899999899999999999999999999999999
Q ss_pred CCcHhHHHHHHHHHHHHHcCCCC--CCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcce
Q 010573 359 PMLAHKAEEDGVACVEFLAGKHG--HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEG 436 (507)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~~~--~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (507)
+++++.|.+||+++|+||++... ..++..+|+++|++|++++||+||++|+..|+++.+..+++....++...+++.|
T Consensus 308 ~~l~~~A~~~g~~~a~ni~~~~~~~~~~~~~~p~~i~t~p~ia~vGlte~ea~~~g~~~~~~~~~~~~~~~~~~~~~~~g 387 (452)
T TIGR03452 308 YQLKHVANAEARVVKHNLLHPNDLRKMPHDFVPSAVFTHPQIATVGLTEQEAREAGHDITVKIQNYGDVAYGWAMEDTTG 387 (452)
T ss_pred ccChhHHHHHHHHHHHHhcCCCCcccCCCCCCCeEEECCCCeeeeeCCHHHHHhcCCCeEEEEecCCchhhHhhcCCCCe
Confidence 89999999999999999997642 5677889999999999999999999999999999999888988888777788889
Q ss_pred EEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcC-cCCCCChHHHHHHHHHH
Q 010573 437 IVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARV-CHAHPTMSEALKEAAMA 499 (507)
Q Consensus 437 ~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~-~~~~p~~~~~~~~~~~~ 499 (507)
|+|+++|+++++|||+|++|+++.|+|+.++.||++++|++||.++ +++|||++|++.++++.
T Consensus 388 ~~Klv~d~~t~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~hPt~~e~~~~a~~~ 451 (452)
T TIGR03452 388 FCKLIADRDTGKLLGAHIIGPQASSLIQPLITAMAFGLDAREMARKQYWIHPALPEVVENALLG 451 (452)
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhCCcccCCchHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999987 67999999999998875
No 24
>TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
Probab=100.00 E-value=1.1e-72 Score=576.48 Aligned_cols=449 Identities=39% Similarity=0.628 Sum_probs=396.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
|||+||||||||++||..|+++|++|+|||++ .+||+|.+.||+|+|.+......+....+ ..+|+......++|..
T Consensus 1 yDvvVIGaGpaG~~aA~~aa~~g~~v~lie~~-~~GG~c~n~gciPsk~l~~~~~~~~~~~~--~~~g~~~~~~~~~~~~ 77 (463)
T TIGR02053 1 YDLVIIGSGAAAFAAAIKAAELGASVAMVERG-PLGGTCVNVGCVPSKMLLRAAEVAHYARK--PPFGGLAATVAVDFGE 77 (463)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-cccCCeeeecEEccHHHHHHHHHHHHhhc--cCcccccCCCccCHHH
Confidence 79999999999999999999999999999995 59999999999999999988877766554 2356655556789999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccCCce
Q 010573 124 MMAQKDKAVSNLTR-GIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITIDEKR 200 (507)
Q Consensus 124 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~~~ 200 (507)
+..+++.....+.. .+..++++.+|+++.+++.+.+.+.+.+. ++ ...+.||+||||||++|.. +||.. ...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~~~~v~v~--~g-~~~~~~~~lIiATGs~p~~p~i~G~~--~~~ 152 (463)
T TIGR02053 78 LLEGKREVVEELRHEKYEDVLSSYGVDYLRGRARFKDPKTVKVD--LG-REVRGAKRFLIATGARPAIPPIPGLK--EAG 152 (463)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHhCCcEEEEEEEEEccCCEEEEc--CC-eEEEEeCEEEEcCCCCCCCCCCCCcc--cCc
Confidence 99999888888765 36678888999999999998887766553 33 3468999999999999853 45543 335
Q ss_pred EecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 201 ~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
++++.+++.+...+++++|||+|.+|+|+|..|.++|.+|+++++.+++++.+|+++...+++.+++.||+++++++|++
T Consensus 153 ~~~~~~~~~~~~~~~~vvIIGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gV~i~~~~~V~~ 232 (463)
T TIGR02053 153 YLTSEEALALDRIPESLAVIGGGAIGVELAQAFARLGSEVTILQRSDRLLPREEPEISAAVEEALAEEGIEVVTSAQVKA 232 (463)
T ss_pred eECchhhhCcccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcCCCccCHHHHHHHHHHHHHcCCEEEcCcEEEE
Confidence 78888887777778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~ 360 (507)
++.+++...+++.. +++++++++|.|++|+|++|+++.+.++..+++++++|+|.||++|||+.|||||+|||++.+.
T Consensus 233 i~~~~~~~~v~~~~--~~~~~~i~~D~ViiA~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~Ts~~~VyAiGD~~~~~~ 310 (463)
T TIGR02053 233 VSVRGGGKIITVEK--PGGQGEVEADELLVATGRRPNTDGLGLEKAGVKLDERGGILVDETLRTSNPGIYAAGDVTGGLQ 310 (463)
T ss_pred EEEcCCEEEEEEEe--CCCceEEEeCEEEEeECCCcCCCCCCccccCCEECCCCcEeECCCccCCCCCEEEeeecCCCcc
Confidence 98766666665532 1234689999999999999999866678889999999999999999999999999999999999
Q ss_pred cHhHHHHHHHHHHHHHcCC-CCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEE
Q 010573 361 LAHKAEEDGVACVEFLAGK-HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (507)
+++.|.+||++||.||++. ..++++..+|.++|++|++++||+|+++|++.|+++.+..+++....++.+.+++.+|+|
T Consensus 311 ~~~~A~~~g~~aa~ni~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k 390 (463)
T TIGR02053 311 LEYVAAKEGVVAAENALGGANAKLDLLVIPRVVFTDPAVASVGLTEAEAQKAGIECDCRTLPLTNVPRARINRDTRGFIK 390 (463)
T ss_pred cHhHHHHHHHHHHHHhcCCCCCccCcCCCCeEEeccCceEEEeCCHHHHHhcCCCeEEEEEecccchHHHhcCCCcEEEE
Confidence 9999999999999999986 556777889999999999999999999999999999999999999889888788899999
Q ss_pred EEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhcc
Q 010573 440 ILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHD 502 (507)
Q Consensus 440 ~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~ 502 (507)
+++|+++++|||+|++|+++.|+|+.++++|++++|++||.+++++|||++|.+..+++....
T Consensus 391 li~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~pt~~e~~~~a~~~~~~ 453 (463)
T TIGR02053 391 LVAEPGTGKVLGVQVVAPEAAEVINEAALAIRAGMTVDDLIDTLHPFPTMAEGLKLAAQTFYR 453 (463)
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcccCCChHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999999987543
No 25
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein. This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Probab=100.00 E-value=2e-72 Score=572.17 Aligned_cols=451 Identities=27% Similarity=0.458 Sum_probs=390.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC-----C---CCCceeccccccchhhhhhhhHHHHHHHhhhhhCCccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-----G---ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF 114 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-----~---~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~ 114 (507)
.||++|||+||||+.||..+++.|.+|+|||+. . .+||+|.+.||+|+|.++..+...+...+ ...+|+..
T Consensus 2 ~yDvvVIG~G~aG~~aA~~aa~~G~~v~lie~~~~~~~~~~~~~GGtc~n~GCiPsK~l~~~a~~~~~~~~-~~~~g~~~ 80 (484)
T TIGR01438 2 DYDLIVIGGGSGGLAAAKEAADYGAKVMLLDFVTPTPLGTRWGIGGTCVNVGCIPKKLMHQAALLGQALKD-SRNYGWNV 80 (484)
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCCcceeccccccccCcCchhHHHHHHHHHHHHhh-hhhcCccc
Confidence 489999999999999999999999999999973 1 58999999999999999988887766543 35567765
Q ss_pred Cc-cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--C
Q 010573 115 SS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--L 191 (507)
Q Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~ 191 (507)
.. ..++|.++..+++..+..+...+..+++..+|+++.|.+.+++++.+.|...+|+...+.||+||||||++|.. +
T Consensus 81 ~~~~~~d~~~~~~~~~~~v~~~~~~~~~~~~~~~v~~i~G~a~f~~~~~v~v~~~~g~~~~~~~d~lVIATGs~p~~p~i 160 (484)
T TIGR01438 81 EETVKHDWNRLSEAVQNHIGSLNWGYRVALREKKVNYENAYAEFVDKHRIKATNKKGKEKIYSAERFLIATGERPRYPGI 160 (484)
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEeccCCCceEEEeCEEEEecCCCCCCCCC
Confidence 44 57899999999999999998888889999999999999999999988887656655689999999999999853 3
Q ss_pred CCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcE
Q 010573 192 PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 192 pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
||.. ...+++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++ +.+++.+|+++.+.+++.|+++||+
T Consensus 161 pG~~---~~~~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~-~~~l~~~d~~~~~~l~~~L~~~gV~ 236 (484)
T TIGR01438 161 PGAK---ELCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFDQDCANKVGEHMEEHGVK 236 (484)
T ss_pred CCcc---ceeecHHHhhcccccCCCEEEECCCHHHHHHHHHHHHhCCcEEEEEe-cccccccCHHHHHHHHHHHHHcCCE
Confidence 4432 23467777777777889999999999999999999999999999987 5778999999999999999999999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecC-CCCeecCCCCCCCCCCeE
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDK-MGRIPVNERFATNIPGVY 350 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~-~G~i~Vd~~~~t~~~~Iy 350 (507)
+++++.+++++..++.+.+++.+. ++.+++++|.|++|+|++||++.+.++..|+++++ +|+|.||+++||++|+||
T Consensus 237 i~~~~~v~~v~~~~~~~~v~~~~~--~~~~~i~~D~vl~a~G~~pn~~~l~l~~~gv~~~~~~G~I~Vd~~~~Ts~p~Iy 314 (484)
T TIGR01438 237 FKRQFVPIKVEQIEAKVKVTFTDS--TNGIEEEYDTVLLAIGRDACTRKLNLENVGVKINKKTGKIPADEEEQTNVPYIY 314 (484)
T ss_pred EEeCceEEEEEEcCCeEEEEEecC--CcceEEEeCEEEEEecCCcCCCcCCcccccceecCcCCeEecCCCcccCCCCEE
Confidence 999999999987666666665421 11357999999999999999998878889999875 489999999999999999
Q ss_pred EecCCCC-CCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHc-CC-CEEEEEEecCccc
Q 010573 351 AIGDVIP-GPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-GV-EYRVGKFPFLANS 426 (507)
Q Consensus 351 A~GD~a~-~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~~-~~~~~~~~~~~~~ 426 (507)
|+|||+. .+.+++.|.+||+.+|+||++.. ...++..+|+.+|++|++++||+||++|++. ++ .+.+...++....
T Consensus 315 A~GDv~~~~~~l~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~i~~~p~ia~vGlte~~a~~~~g~~~~~~~~~~~~~~~ 394 (484)
T TIGR01438 315 AVGDILEDKQELTPVAIQAGRLLAQRLFSGSTVICDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVFHSYFWPLE 394 (484)
T ss_pred EEEEecCCCccchHHHHHHHHHHHHHHhcCCCcccccccCCeEEeCCCceeeecCCHHHHHHhcCCCcEEEEEeecchhh
Confidence 9999996 67899999999999999999753 3357888999999999999999999999986 55 6777777777666
Q ss_pred chhhcCC--cceEEEEEEE-CCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh
Q 010573 427 RAKAIDD--AEGIVKILAE-KETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 427 ~~~~~~~--~~~~~k~~~~-~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 500 (507)
++....+ +.+|+|++++ +++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++..
T Consensus 395 ~~~~~~~~~~~g~~Kli~~~~~t~~ILG~~ivg~~a~e~I~~~a~ai~~~~t~~dl~~~~~~hPt~sE~~~~~~~~~ 471 (484)
T TIGR01438 395 WTIPSRDNSNKCYAKAVCNRKENERVVGFHVVGPNAGEVTQGFAAALRCGLTKKDLDNTIGIHPVCAEVFTTLSVTK 471 (484)
T ss_pred hHhhCCCccCCcEEEEEEecCCCCeEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhhhcCCCChHHHHHHhhhhh
Confidence 6555443 6799999996 468999999999999999999999999999999999999999999999999998663
No 26
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=2.5e-72 Score=574.29 Aligned_cols=453 Identities=45% Similarity=0.741 Sum_probs=401.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.+|||+||||||||++||.+|++.|++|+|||+ +.+||+|.+.||+|++.+.+....+....+ ...+|+.......++
T Consensus 2 ~~yDvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~GG~~~~~gc~psk~l~~~~~~~~~~~~-~~~~gi~~~~~~~~~ 79 (460)
T PRK06292 2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEK-GPLGGTCLNVGCIPSKALIAAAEAFHEAKH-AEEFGIHADGPKIDF 79 (460)
T ss_pred CcccEEEECCCHHHHHHHHHHHHCCCeEEEEeC-CccccceeccceeeHHHHHHHHHHHHHHHH-HHhcCCCcCCCccCH
Confidence 359999999999999999999999999999999 789999999999999999988877766544 356676654457899
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CCCCCCCc-cCC
Q 010573 122 PAMMAQKDKAVSNLTRGI-EGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VKSLPGIT-IDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~~~pg~~-~~~ 198 (507)
..+..+.+.....+...+ ...++..+++++.+.+.+++.+.+.+ ++ .++.||+||||||++ | .+|+.. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~v~v---~~--~~~~~d~lIiATGs~~p-~ipg~~~~~~ 153 (460)
T PRK06292 80 KKVMARVRRERDRFVGGVVEGLEKKPKIDKIKGTARFVDPNTVEV---NG--ERIEAKNIVIATGSRVP-PIPGVWLILG 153 (460)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHhhCCCEEEEEEEEEccCCEEEE---Cc--EEEEeCEEEEeCCCCCC-CCCCCcccCC
Confidence 999999888888777666 56677889999999999888887766 34 679999999999999 5 355543 234
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..++++++.+.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+++.+++. |++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~k~v~VIGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~-I~i~~~~~v 232 (460)
T PRK06292 154 DRLLTSDDAFELDKLPKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEDPEVSKQAQKILSKE-FKIKLGAKV 232 (460)
T ss_pred CcEECchHHhCccccCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcchhHHHHHHHHHHHhhc-cEEEcCCEE
Confidence 4577888888777889999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 279 VGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 279 ~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
++++.+++ .+.++. .+++++++++|.|++++|++|+++.+.++..|++++++|+|.||+++||++|||||+|||++
T Consensus 233 ~~i~~~~~~~v~~~~---~~~~~~~i~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~g~i~vd~~~~ts~~~IyA~GD~~~ 309 (460)
T PRK06292 233 TSVEKSGDEKVEELE---KGGKTETIEADYVLVATGRRPNTDGLGLENTGIELDERGRPVVDEHTQTSVPGIYAAGDVNG 309 (460)
T ss_pred EEEEEcCCceEEEEE---cCCceEEEEeCEEEEccCCccCCCCCCcHhhCCEecCCCcEeECCCcccCCCCEEEEEecCC
Confidence 99986654 344432 12355689999999999999999987678889999988999999999999999999999999
Q ss_pred CCCcHhHHHHHHHHHHHHHcCC-CCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcce
Q 010573 358 GPMLAHKAEEDGVACVEFLAGK-HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEG 436 (507)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (507)
.+++++.|..||+.||.||++. ....++..+|+.+|++|++++||+|+++|++.|+++.+..+++....++.+.+++++
T Consensus 310 ~~~~~~~A~~qg~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g 389 (460)
T PRK06292 310 KPPLLHEAADEGRIAAENAAGDVAGGVRYHPIPSVVFTDPQIASVGLTEEELKAAGIDYVVGEVPFEAQGRARVMGKNDG 389 (460)
T ss_pred CccchhHHHHHHHHHHHHhcCCCCCCcCCCCCCeEEECCCccEEeECCHHHHHhcCCCeEEEEEecccchHHHhcCCCCe
Confidence 8889999999999999999984 445677889999999999999999999999999999999999999999888888899
Q ss_pred EEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 437 IVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 437 ~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.+.+++.+
T Consensus 390 ~~klv~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 459 (460)
T PRK06292 390 FVKVYADKKTGRLLGAHIIGPDAEHLIHLLAWAMQQGLTVEDLLRMPFYHPTLSEGLRTALRDLFSKLIH 459 (460)
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCccCCCCHHHHHHHHHHHHhhhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999998877654
No 27
>PTZ00058 glutathione reductase; Provisional
Probab=100.00 E-value=1.7e-72 Score=575.77 Aligned_cols=442 Identities=26% Similarity=0.458 Sum_probs=381.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.+|||+||||||||++||..+++.|.+|+|||+ +.+||+|.++||+|+|.++..+.......+ ...+|+... ..++|
T Consensus 47 ~~yDvvVIG~G~aG~~aA~~aa~~G~~ValIEk-~~~GGtCln~GCiPsK~l~~~a~~~~~~~~-~~~~Gi~~~-~~~d~ 123 (561)
T PTZ00058 47 MVYDLIVIGGGSGGMAAARRAARNKAKVALVEK-DYLGGTCVNVGCVPKKIMFNAASIHDILEN-SRHYGFDTQ-FSFNL 123 (561)
T ss_pred ccccEEEECcCHHHHHHHHHHHHcCCeEEEEec-ccccccccccCCCCCchhhhhcccHHHHHH-HHhcCCCcc-CccCH
Confidence 569999999999999999999999999999999 589999999999999999988887665443 355676532 36899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEE--------------------------ccCCceEEE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVD--------------------------TIEGGNTVV 175 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~--------------------------~~~g~~~~~ 175 (507)
..+..+.+..+..+...+.+.+++.+|+++.|.+.+.+++++.|. ..+| ..+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~G~a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g--~~i 201 (561)
T PTZ00058 124 PLLVERRDKYIRRLNDIYRQNLKKDNVEYFEGKGSLLSENQVLIKKVSQVDGEADESDDDEVTIVSAGVSQLDDG--QVI 201 (561)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEecCCEEEeeccccccccccccccccceeeeccceecCCC--cEE
Confidence 999999999999998888889999999999999999998887641 2344 579
Q ss_pred EeCeEEEccCCCCCC--CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCC
Q 010573 176 KGKNIIIATGSDVKS--LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSM 253 (507)
Q Consensus 176 ~~d~lvlAtG~~p~~--~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 253 (507)
.||+||||||++|.. +||. ..++++++.+.+.. +++++|||+|++|+|+|..|.++|++||++++.+++++.+
T Consensus 202 ~ad~lVIATGS~P~~P~IpG~----~~v~ts~~~~~l~~-pk~VvIIGgG~iGlE~A~~l~~~G~~Vtli~~~~~il~~~ 276 (561)
T PTZ00058 202 EGKNILIAVGNKPIFPDVKGK----EFTISSDDFFKIKE-AKRIGIAGSGYIAVELINVVNRLGAESYIFARGNRLLRKF 276 (561)
T ss_pred ECCEEEEecCCCCCCCCCCCc----eeEEEHHHHhhccC-CCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecccccccC
Confidence 999999999999953 3432 23677777776655 9999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDK 332 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~ 332 (507)
|+++.+.+.+.|++.||++++++.+.+++.+++ ++.+.+. ++++++++|.|++|+|++|+++.+.++..++.. +
T Consensus 277 d~~i~~~l~~~L~~~GV~i~~~~~V~~I~~~~~~~v~v~~~----~~~~~i~aD~VlvA~Gr~Pn~~~L~l~~~~~~~-~ 351 (561)
T PTZ00058 277 DETIINELENDMKKNNINIITHANVEEIEKVKEKNLTIYLS----DGRKYEHFDYVIYCVGRSPNTEDLNLKALNIKT-P 351 (561)
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEecCCCcEEEEEC----CCCEEEECCEEEECcCCCCCccccCccccceec-C
Confidence 999999999999999999999999999986543 4554442 134579999999999999999987767666654 5
Q ss_pred CCCeecCCCCCCCCCCeEEecCCCC----------------------------------CCCcHhHHHHHHHHHHHHHcC
Q 010573 333 MGRIPVNERFATNIPGVYAIGDVIP----------------------------------GPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 333 ~G~i~Vd~~~~t~~~~IyA~GD~a~----------------------------------~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+|+|.||+++||++|||||+|||++ .+++++.|.+||++||+||++
T Consensus 352 ~G~I~VDe~lqTs~p~IYA~GDv~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~la~~A~~~g~~aa~ni~g 431 (561)
T PTZ00058 352 KGYIKVDDNQRTSVKHIYAVGDCCMVKKNQEIEDLNLLKLYNEEPYLKKKENTSGESYYNVQLTPVAINAGRLLADRLFG 431 (561)
T ss_pred CCeEEECcCCccCCCCEEEeEeccCccccccccccccccccccccccccccccccccccCcCchHHHHHHHHHHHHHHhC
Confidence 7999999999999999999999998 678999999999999999998
Q ss_pred CC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHc-CC-CEEEEEEecCcccchhhc----CCcceEEEEEEECCCCeEEE
Q 010573 379 KH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-GV-EYRVGKFPFLANSRAKAI----DDAEGIVKILAEKETDKILG 451 (507)
Q Consensus 379 ~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~----~~~~~~~k~~~~~~~~~ilG 451 (507)
.. ...++..+|+++|++|++|+||+||++|++. |+ ++.+...++....++... .++++++|+++++++++|||
T Consensus 432 ~~~~~~~~~~ip~~vft~peiA~vGlte~eA~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~t~~ILG 511 (561)
T PTZ00058 432 PFSRTTNYKLIPSVIFSHPPIGTIGLSEQEAIDIYGKENVKIYESRFTNLFFSVYDMDPAQKEKTYLKLVCVGKEELIKG 511 (561)
T ss_pred CCCcccCCCCCCeEEeCCchheeeeCCHHHHHHhcCCCcEEEEEeecchhhhhhhcccccCCCCeEEEEEEECCCCEEEE
Confidence 63 3457788999999999999999999999987 65 577777777766665432 24679999999999999999
Q ss_pred EEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHH
Q 010573 452 VHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM 498 (507)
Q Consensus 452 ~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~ 498 (507)
+|++|+++.|+|+.++.||++++|++||.+++++|||++|++..++.
T Consensus 512 ~~ivG~~a~elI~~~a~ai~~~~t~~dl~~~~~~hPt~~e~~~~~~~ 558 (561)
T PTZ00058 512 LHIVGLNADEILQGFAVALKMNATKADFDETIPIHPTAAEEFVTMAP 558 (561)
T ss_pred EEEECCCHHHHHHHHHHHHHcCCCHHHHhhcccCCCChHHHHHHhcc
Confidence 99999999999999999999999999999999999999999988764
No 28
>PRK13748 putative mercuric reductase; Provisional
Probab=100.00 E-value=3.8e-72 Score=586.56 Aligned_cols=449 Identities=32% Similarity=0.498 Sum_probs=391.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..|||+||||||||++||..|++.|.+|+|||++ .+||+|.+.||+|+|.++...+........-...|+.......++
T Consensus 97 ~~~DvvVIG~GpaG~~aA~~~~~~G~~v~lie~~-~~GG~c~n~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 175 (561)
T PRK13748 97 RPLHVAVIGSGGAAMAAALKAVEQGARVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 175 (561)
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCeEEEEecC-cceeeccccCccccHHHHHHHHHHHHHhcccccCCccCCCCccCH
Confidence 4699999999999999999999999999999995 899999999999999998888776654432111366544456889
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhC-CcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccC
Q 010573 122 PAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITID 197 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~-~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~ 197 (507)
.++..+++..+..+... +...+++. +|+++.+.+.+++.+.+.|.+.+|+...+.||+||||||++|.. +||..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~-- 253 (561)
T PRK13748 176 SRLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQTLIVRLNDGGERVVAFDRCLIATGASPAVPPIPGLK-- 253 (561)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHhccCCeEEEEEEEEEecCCEEEEEeCCCceEEEEcCEEEEcCCCCCCCCCCCCCC--
Confidence 99999888887776543 55666665 89999999999999999998777655679999999999999853 44433
Q ss_pred CceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCce
Q 010573 198 EKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
...+++..+.+.....+++++|||+|++|+|+|..|.++|.+|+++++. .+++.+|+++.+.+++.|++.||++++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtli~~~-~~l~~~d~~~~~~l~~~l~~~gI~i~~~~~ 332 (561)
T PRK13748 254 ETPYWTSTEALVSDTIPERLAVIGSSVVALELAQAFARLGSKVTILARS-TLFFREDPAIGEAVTAAFRAEGIEVLEHTQ 332 (561)
T ss_pred ccceEccHHHhhcccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecC-ccccccCHHHHHHHHHHHHHCCCEEEcCCE
Confidence 3345666666656667899999999999999999999999999999985 467778999999999999999999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 278 v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
+++++.+++.+.+... + .++++|.|++|+|++||+..+.++..|++++++|+|.||+++||++|||||+|||++
T Consensus 333 v~~i~~~~~~~~v~~~-----~-~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~g~i~vd~~~~Ts~~~IyA~GD~~~ 406 (561)
T PRK13748 333 ASQVAHVDGEFVLTTG-----H-GELRADKLLVATGRAPNTRSLALDAAGVTVNAQGAIVIDQGMRTSVPHIYAAGDCTD 406 (561)
T ss_pred EEEEEecCCEEEEEec-----C-CeEEeCEEEEccCCCcCCCCcCchhcCceECCCCCEeECCCcccCCCCEEEeeecCC
Confidence 9999876666555432 2 369999999999999999877678889999999999999999999999999999999
Q ss_pred CCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceE
Q 010573 358 GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGI 437 (507)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (507)
.+.+.+.|..||++||.||++....+++..+|.++|++|++++||+|+++|+..|+++.+..+++....++....++++|
T Consensus 407 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 486 (561)
T PRK13748 407 QPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGF 486 (561)
T ss_pred CccchhHHHHHHHHHHHHHcCCCcccCCCCCCeEEEccCCceeeeCCHHHHHHcCCCeEEEEEecccCchhhhcCCCCeE
Confidence 99999999999999999999877667888899999999999999999999999999999999988888877666667899
Q ss_pred EEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh
Q 010573 438 VKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 438 ~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 500 (507)
+|+++|+++++|||+|++|+++.|+|+.++++|++++|++||.+++++|||++|++.++++..
T Consensus 487 ~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~ 549 (561)
T PRK13748 487 IKLVIEEGSGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTF 549 (561)
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcccccCCchHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999998754
No 29
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Probab=100.00 E-value=8.6e-71 Score=563.49 Aligned_cols=457 Identities=53% Similarity=0.859 Sum_probs=409.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
.|||+||||||||++||.+|++.|++|+|||+ +.+||+|.+.||+|++.+......+..+.+ ...+++......++|.
T Consensus 1 ~yDvvVIG~G~aGl~aA~~la~~G~~v~lie~-~~~GG~~~~~gc~Psk~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~ 78 (461)
T TIGR01350 1 AYDVVVIGGGPGGYVAAIRAAQLGLKVALVEK-EYLGGTCLNVGCIPTKALLHSAEVYDEIKH-AKDYGIEVENVSVDWE 78 (461)
T ss_pred CccEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCceeecCccchHHHHHHhhHHHHHHH-HHhcCCCCCCCcCCHH
Confidence 38999999999999999999999999999999 899999999999999999988888777663 6677876666678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCC-CccCCceE
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPG-ITIDEKRI 201 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg-~~~~~~~~ 201 (507)
.+..+.+....++...+..++++.+++++.+++.+++++.+.+...++ ...+.||+||||||++|..+|. ...+...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g-~~~~~~d~lVlAtG~~p~~~~~~~~~~~~~~ 157 (461)
T TIGR01350 79 KMQKRKNKVVKKLVGGVKGLLKKNKVTVIKGEAKFLDPGTVLVTGENG-EETLTAKNIIIATGSRPRSLPGPFDFDGEVV 157 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCC-cEEEEeCEEEEcCCCCCCCCCCCCCCCCceE
Confidence 999998888888888888889999999999999999999988886554 2579999999999999975554 34444568
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+++.+...+...+++++|||+|.+|+|+|..+.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++++++
T Consensus 158 ~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~l~~~gi~i~~~~~v~~i 237 (461)
T TIGR01350 158 ITSTGALNLKEVPESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRILPGEDAEVSKVVAKALKKKGVKILTNTKVTAV 237 (461)
T ss_pred EcchHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 88888888777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCc
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPML 361 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~ 361 (507)
+.+++++.+.+. ++..+++++|.+++|+|.+|++..+.++..++.++++|+|.||+++||+.|+|||+|||++.+.+
T Consensus 238 ~~~~~~v~v~~~---~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~IyaiGD~~~~~~~ 314 (461)
T TIGR01350 238 EKNDDQVVYENK---GGETETLTGEKVLVAVGRKPNTEGLGLENLGVELDERGRIVVDEYMRTNVPGIYAIGDVIGGPML 314 (461)
T ss_pred EEeCCEEEEEEe---CCcEEEEEeCEEEEecCCcccCCCCCcHhhCceECCCCcEeeCCCcccCCCCEEEeeecCCCccc
Confidence 877777766543 22235799999999999999998655788899999999999999999999999999999998899
Q ss_pred HhHHHHHHHHHHHHHcCCCC-CCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEE
Q 010573 362 AHKAEEDGVACVEFLAGKHG-HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 440 (507)
Q Consensus 362 ~~~A~~~g~~aa~~i~~~~~-~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 440 (507)
++.|..||+.||+||.+... .+++...|.+.|++|+++++|+++++++..|+++.+..+++....++.+.+++.+|+|+
T Consensus 315 ~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl 394 (461)
T TIGR01350 315 AHVASHEGIVAAENIAGKEPAPIDYDAVPSCIYTDPEVASVGLTEEQAKEAGYDVKIGKFPFAANGKALALGETDGFVKI 394 (461)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCCeEEecCCceEEEeCCHHHHHhCCCCeEEEEEeCccchHHHhcCCCceEEEE
Confidence 99999999999999997654 56778899999999999999999999999999999999998888888877788999999
Q ss_pred EEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCC
Q 010573 441 LAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPI 505 (507)
Q Consensus 441 ~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~ 505 (507)
++|+++++|||+|++|+++.|+|+.++.||++++|++||.+++++|||++|++..+++.+..+..
T Consensus 395 ~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~ 459 (461)
T TIGR01350 395 IADKKTGEILGAHIIGPHATELISEAVLAMELELTVEELAKTIHPHPTLSEAIKEAALAALGKPI 459 (461)
T ss_pred EEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcccCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999987765533
No 30
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=100.00 E-value=5.4e-71 Score=560.59 Aligned_cols=432 Identities=30% Similarity=0.519 Sum_probs=375.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC-CCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.|||+||||||||++||.+|+++|++|+|||+.+ .+||+|.+.+|+|++.+..... ...+|
T Consensus 3 ~yDvvVIGgGpaGl~aA~~la~~g~~V~lie~~~~~~GG~~~~~gcip~k~l~~~~~------------------~~~~~ 64 (441)
T PRK08010 3 KYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQ------------------QHTDF 64 (441)
T ss_pred cCCEEEECCCHhHHHHHHHHHHCCCeEEEEcCCCCccceeEeeccccchHHHHHHhc------------------cCCCH
Confidence 5999999999999999999999999999999965 5899999999999987654321 02466
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGI-EGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~~~ 198 (507)
.....+.+..+..+.... ..+.+..+++++.+++.+++.+.+.|.+.++ ..++.||+||||||++|. .+||... .
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g-~~~~~~d~lviATGs~p~~p~i~G~~~-~ 142 (441)
T PRK08010 65 VRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEG-NLEIHGEKIFINTGAQTVVPPIPGITT-T 142 (441)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhcCCcEEEEEEEEEecCCEEEEEeCCC-eEEEEeCEEEEcCCCcCCCCCCCCccC-C
Confidence 666666666655554322 3334455999999999999999988887666 246999999999999985 4455431 2
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..++++.+++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.+++.||++++++++
T Consensus 143 ~~v~~~~~~~~~~~~~~~v~ViGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gV~v~~~~~v 222 (441)
T PRK08010 143 PGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHV 222 (441)
T ss_pred CCEEChhHhhcccccCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCHHHHHHHHHHHHhCCCEEEeCCEE
Confidence 34677777777777799999999999999999999999999999999999999899999999999999999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~ 358 (507)
++++.+++.+.+... + .++++|.|++|+|++|+++.+.++..|++++++|+|.||+++||++|||||+|||++.
T Consensus 223 ~~i~~~~~~v~v~~~-----~-g~i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~vd~~~~Ts~~~IyA~GD~~~~ 296 (441)
T PRK08010 223 ERISHHENQVQVHSE-----H-AQLAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKYLHTTADNIWAMGDVTGG 296 (441)
T ss_pred EEEEEcCCEEEEEEc-----C-CeEEeCEEEEeecCCcCCCCcCchhcCcEECCCCcEEECCCcccCCCCEEEeeecCCC
Confidence 999876666655532 2 3589999999999999998766778899999889999999999999999999999999
Q ss_pred CCcHhHHHHHHHHHHHHHcCC-CC-CCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcce
Q 010573 359 PMLAHKAEEDGVACVEFLAGK-HG-HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEG 436 (507)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~-~~-~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (507)
+++++.|..||+++++||+++ .. ...+..+|.++|++|++++||+||++|++.|+++.+..+++....++.+++++.|
T Consensus 297 ~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g 376 (441)
T PRK08010 297 LQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTLPVAAIPRARVMNDTRG 376 (441)
T ss_pred ccchhHHHHHHHHHHHHHcCCCCcccCccCCCCEEEECCCCceeeeCCHHHHHHcCCCeEEEEEecCcChhhhhcCCCce
Confidence 999999999999999999985 22 2467789999999999999999999999999999999999999999988888899
Q ss_pred EEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh
Q 010573 437 IVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 437 ~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 500 (507)
|+|+++|+++++|||+|++|+++.|+|+.++.+|++++|+++|.+.+++|||++|.+.+++..+
T Consensus 377 ~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~ 440 (441)
T PRK08010 377 VLKAIVDNKTQRILGASLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDLFSLV 440 (441)
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhccccCCchHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999987653
No 31
>PTZ00052 thioredoxin reductase; Provisional
Probab=100.00 E-value=2.6e-70 Score=559.44 Aligned_cols=446 Identities=28% Similarity=0.410 Sum_probs=377.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC--------CCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG--------ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK 113 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~--------~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~ 113 (507)
.+|||+||||||||++||.+|+++|++|+|||+.. .+||+|.+.||+|+|.+................+|+.
T Consensus 4 ~~yDviVIG~GpaG~~AA~~aa~~G~~V~lie~~~~~~~~~~~~~GG~C~n~gciPsK~l~~~a~~~~~~~~~~~~~g~~ 83 (499)
T PTZ00052 4 FMYDLVVIGGGSGGMAAAKEAAAHGKKVALFDYVKPSTQGTKWGLGGTCVNVGCVPKKLMHYAANIGSIFHHDSQMYGWK 83 (499)
T ss_pred cccCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCCCCccccccccceeccccccchHHHHHHHHHHHHHHhHHhcCCCC
Confidence 36999999999999999999999999999999631 4899999999999999888888777665444556776
Q ss_pred cCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCC
Q 010573 114 FSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPG 193 (507)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg 193 (507)
... ..+|..+..+.+..+..+...+...++..+|+++.+.+.+.+.+.+.+... ++...+.||+||||||++|..++.
T Consensus 84 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~a~~~~~~~v~v~~~-~~~~~i~~d~lIIATGs~p~~p~~ 161 (499)
T PTZ00052 84 TSS-SFNWGKLVTTVQNHIRSLNFSYRTGLRSSKVEYINGLAKLKDEHTVSYGDN-SQEETITAKYILIATGGRPSIPED 161 (499)
T ss_pred CCC-CcCHHHHHHHHHHHHHHhhHHHHHHhhhcCcEEEEEEEEEccCCEEEEeeC-CCceEEECCEEEEecCCCCCCCCC
Confidence 444 789999999999998888777777778889999999999988888777532 223679999999999999863322
Q ss_pred CccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEE
Q 010573 194 ITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 273 (507)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~ 273 (507)
++......+++++++.+...+++++|||+|++|+|+|..|+++|.+||++++ +.+++.+|+++.+.+++.|++.||+++
T Consensus 162 i~G~~~~~~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~-~~~l~~~d~~~~~~l~~~l~~~GV~i~ 240 (499)
T PTZ00052 162 VPGAKEYSITSDDIFSLSKDPGKTLIVGASYIGLETAGFLNELGFDVTVAVR-SIPLRGFDRQCSEKVVEYMKEQGTLFL 240 (499)
T ss_pred CCCccceeecHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEc-CcccccCCHHHHHHHHHHHHHcCCEEE
Confidence 2211223567778877777789999999999999999999999999999987 466788999999999999999999999
Q ss_pred cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEec
Q 010573 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (507)
Q Consensus 274 ~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~G 353 (507)
+++.+++++..++.+.+.+. +++++++|.|++++|++||++++.++..+++++++|++.+++. +|++|+|||+|
T Consensus 241 ~~~~v~~v~~~~~~~~v~~~-----~g~~i~~D~vl~a~G~~pn~~~l~l~~~g~~~~~~G~ii~~~~-~Ts~p~IyAiG 314 (499)
T PTZ00052 241 EGVVPINIEKMDDKIKVLFS-----DGTTELFDTVLYATGRKPDIKGLNLNAIGVHVNKSNKIIAPND-CTNIPNIFAVG 314 (499)
T ss_pred cCCeEEEEEEcCCeEEEEEC-----CCCEEEcCEEEEeeCCCCCccccCchhcCcEECCCCCEeeCCC-cCCCCCEEEEE
Confidence 99999999876656666654 3457899999999999999998777888999999898777777 99999999999
Q ss_pred CCCC-CCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecCcccchh
Q 010573 354 DVIP-GPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFLANSRAK 429 (507)
Q Consensus 354 D~a~-~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 429 (507)
||+. .+.+++.|.+||+.+|+||++.. ...++..+|+++|++|++++||+||++|++. + .++.+..+++.....+.
T Consensus 315 Dv~~~~~~l~~~A~~~g~~aa~ni~g~~~~~~~~~~~p~~ift~p~ia~vGlte~~A~~~~~~~~~~~~~~~~~~~~~~~ 394 (499)
T PTZ00052 315 DVVEGRPELTPVAIKAGILLARRLFKQSNEFIDYTFIPTTIFTPIEYGACGYSSEAAIAKYGEDDIEEYLQEFNTLEIAA 394 (499)
T ss_pred EecCCCcccHHHHHHHHHHHHHHHhCCCCCcCccccCCeEEecCCcceeecCCHHHHHHhcCCCCEEEEEeecccchhhc
Confidence 9994 67899999999999999999754 3357888999999999999999999999987 4 46888777765433222
Q ss_pred hc---------------CCcceEEEEEEEC-CCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHH
Q 010573 430 AI---------------DDAEGIVKILAEK-ETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAL 493 (507)
Q Consensus 430 ~~---------------~~~~~~~k~~~~~-~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~ 493 (507)
.. .+++||+|+++++ ++++|||+|++|++|.|+|+.+++||++++|++||.+++++|||++|++
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~IlG~~ivg~~A~elI~~~~~ai~~~~t~~~l~~~~~~hPt~sE~~ 474 (499)
T PTZ00052 395 VHREKHERARKDEYDFDVSSNCLAKLVCVKSEDNKVVGFHFVGPNAGEITQGFSLALKLGAKKSDFDSMIGIHPTDAEVF 474 (499)
T ss_pred cccccccccccccccccccCCceEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcccccCCCCchhh
Confidence 11 1267999999997 4899999999999999999999999999999999999999999999988
Q ss_pred HHH
Q 010573 494 KEA 496 (507)
Q Consensus 494 ~~~ 496 (507)
..+
T Consensus 475 ~~~ 477 (499)
T PTZ00052 475 MNL 477 (499)
T ss_pred EEE
Confidence 655
No 32
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=100.00 E-value=2.1e-69 Score=548.43 Aligned_cols=429 Identities=31% Similarity=0.522 Sum_probs=376.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC-CCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA-LGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~-~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.|||+||||||||++||..|++.|++|+|||+++. +||+|.+.+|+|++.++..... ..+|
T Consensus 3 ~~dvvVIG~GpaG~~aA~~l~~~g~~V~liE~~~~~~GG~c~~~gciP~k~~~~~~~~------------------~~~~ 64 (438)
T PRK07251 3 TYDLIVIGFGKAGKTLAAKLASAGKKVALVEESKAMYGGTCINIGCIPTKTLLVAAEK------------------NLSF 64 (438)
T ss_pred ccCEEEECCCHHHHHHHHHHHhCCCEEEEEecCCcccceeeecCccccchHhhhhhhc------------------CCCH
Confidence 59999999999999999999999999999999764 7999999999999887654431 2467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCccCCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDEK 199 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~~~~ 199 (507)
.++..+.+....++.....+.+.+.+|+++.+++.+++.+.+.+...+ +...+.||+||||||++|. .+||.. ...
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~v~~~~-~~~~~~~d~vViATGs~~~~p~i~G~~-~~~ 142 (438)
T PRK07251 65 EQVMATKNTVTSRLRGKNYAMLAGSGVDLYDAEAHFVSNKVIEVQAGD-EKIELTAETIVINTGAVSNVLPIPGLA-DSK 142 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEeeCC-CcEEEEcCEEEEeCCCCCCCCCCCCcC-CCC
Confidence 777777777777776666677888999999999999888877776422 2357999999999999985 445543 234
Q ss_pred eEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 200 RIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 200 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
.++++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++..++++.+.+.+.+++.||+++++++++
T Consensus 143 ~v~~~~~~~~~~~~~~~vvIIGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~l~~~GI~i~~~~~V~ 222 (438)
T PRK07251 143 HVYDSTGIQSLETLPERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTILPREEPSVAALAKQYMEEDGITFLLNAHTT 222 (438)
T ss_pred cEEchHHHhcchhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCccCCCCCHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 57888888877778999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~ 359 (507)
+++.+++.+.+.. +++++++|.+++|+|++|+++.+.++..++.++++|+|.||+++||++|||||+|||++.+
T Consensus 223 ~i~~~~~~v~v~~------~g~~i~~D~viva~G~~p~~~~l~l~~~~~~~~~~g~i~vd~~~~t~~~~IyaiGD~~~~~ 296 (438)
T PRK07251 223 EVKNDGDQVLVVT------EDETYRFDALLYATGRKPNTEPLGLENTDIELTERGAIKVDDYCQTSVPGVFAVGDVNGGP 296 (438)
T ss_pred EEEecCCEEEEEE------CCeEEEcCEEEEeeCCCCCcccCCchhcCcEECCCCcEEECCCcccCCCCEEEeeecCCCc
Confidence 9987665555542 3468999999999999999988777777888888899999999999999999999999999
Q ss_pred CcHhHHHHHHHHHHHHHcCCCC--CCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceE
Q 010573 360 MLAHKAEEDGVACVEFLAGKHG--HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGI 437 (507)
Q Consensus 360 ~~~~~A~~~g~~aa~~i~~~~~--~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (507)
.+.+.|..+|+.++.++++... ...+..+|+.+|++|+++++|+|+++++..|+++.+..+++....++...++.+|+
T Consensus 297 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 376 (438)
T PRK07251 297 QFTYISLDDFRIVFGYLTGDGSYTLEDRGNVPTTMFITPPLSQVGLTEKEAKEAGLPYAVKELLVAAMPRAHVNNDLRGA 376 (438)
T ss_pred ccHhHHHHHHHHHHHHHcCCCCccccccCCCCEEEECCCceEeeeCCHHHHHhcCCCeEEEEEECCcchhhhhcCCCcEE
Confidence 9999999999999999987643 23566799999999999999999999999999999999999888888777888899
Q ss_pred EEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 438 VKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 438 ~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
+|+++|+++++|||+|++|+++.|+|+.++.||++++|+++|.+++++|||++|.+.++.
T Consensus 377 ~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 436 (438)
T PRK07251 377 FKVVVNTETKEILGATLFGEGSQEIINLITMAMDNKIPYTYFKKQIFTHPTMAENLNDLF 436 (438)
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcccccCCChHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999998764
No 33
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-70 Score=493.92 Aligned_cols=448 Identities=32% Similarity=0.512 Sum_probs=402.6
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCccc-C
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-S 115 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~-~ 115 (507)
++.....||++|||||..|+++|.++++.|.++.|+|..-.+||+|.+.||+|.+.+++.+.....+.+ ...+|++. .
T Consensus 14 ~a~~~k~fDylvIGgGSGGvasARrAa~~GAkv~l~E~~f~lGGTCVn~GCVPKKvm~~~a~~~~~~~d-a~~yG~~~~~ 92 (478)
T KOG0405|consen 14 MAADVKDFDYLVIGGGSGGVASARRAASHGAKVALCELPFGLGGTCVNVGCVPKKVMWYAADYSEEMED-AKDYGFPINE 92 (478)
T ss_pred ccccccccceEEEcCCcchhHHhHHHHhcCceEEEEecCCCcCceEEeeccccceeEEehhhhhHHhhh-hhhcCCcccc
Confidence 666677899999999999999999999999999999996699999999999999999887766555544 47788877 4
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC--CCCCC
Q 010573 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV--KSLPG 193 (507)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p--~~~pg 193 (507)
...++|..+.+.++..+.++...++..+.+..|+++.|.+.++++..+.|+..++....+++++++||||++| |.+||
T Consensus 93 ~~~fdW~~ik~krdayi~RLngIY~~~L~k~~V~~i~G~a~f~~~~~v~V~~~d~~~~~Ytak~iLIAtGg~p~~PnIpG 172 (478)
T KOG0405|consen 93 EGSFDWKVIKQKRDAYILRLNGIYKRNLAKAAVKLIEGRARFVSPGEVEVEVNDGTKIVYTAKHILIATGGRPIIPNIPG 172 (478)
T ss_pred ccCCcHHHHHhhhhHHHHHHHHHHHhhccccceeEEeeeEEEcCCCceEEEecCCeeEEEecceEEEEeCCccCCCCCCc
Confidence 6789999999999999999999999999999999999999999999999999888667799999999999999 46676
Q ss_pred CccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEE
Q 010573 194 ITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 273 (507)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~ 273 (507)
.+ .-++++.++++++.|++++|||+|++++|+|..|+.+|++++++.|.+.+++.||+.+++.+.+.|+..||++|
T Consensus 173 ~E----~gidSDgff~Lee~Pkr~vvvGaGYIavE~Agi~~gLgsethlfiR~~kvLR~FD~~i~~~v~~~~~~~ginvh 248 (478)
T KOG0405|consen 173 AE----LGIDSDGFFDLEEQPKRVVVVGAGYIAVEFAGIFAGLGSETHLFIRQEKVLRGFDEMISDLVTEHLEGRGINVH 248 (478)
T ss_pred hh----hccccccccchhhcCceEEEEccceEEEEhhhHHhhcCCeeEEEEecchhhcchhHHHHHHHHHHhhhcceeec
Confidence 44 45788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEec
Q 010573 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (507)
Q Consensus 274 ~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~G 353 (507)
.++.++++....++..+...+ .+....+|.++||+|+.|++..|++++.|++++.+|.|.||++.+||+|+||++|
T Consensus 249 ~~s~~~~v~K~~~g~~~~i~~----~~~i~~vd~llwAiGR~Pntk~L~le~vGVk~~~~g~IivDeYq~Tnvp~I~avG 324 (478)
T KOG0405|consen 249 KNSSVTKVIKTDDGLELVITS----HGTIEDVDTLLWAIGRKPNTKGLNLENVGVKTDKNGAIIVDEYQNTNVPSIWAVG 324 (478)
T ss_pred ccccceeeeecCCCceEEEEe----ccccccccEEEEEecCCCCcccccchhcceeeCCCCCEEEeccccCCCCceEEec
Confidence 999999998776664433322 3345559999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHhHHHHHHHHHHHHHcC--CCCCCCCCCccEEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecCcccchh
Q 010573 354 DVIPGPMLAHKAEEDGVACVEFLAG--KHGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFLANSRAK 429 (507)
Q Consensus 354 D~a~~~~~~~~A~~~g~~aa~~i~~--~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 429 (507)
|+++...+++.|+..|+..++.+++ ++.+.+|+.+|+++|+.|+++.||+||+||.++ | -++++..-.|.....+.
T Consensus 325 Dv~gk~~LTPVAiaagr~la~rlF~~~~~~kldY~nVp~vVFshP~igtVGLtE~EAiekyg~~~i~vy~s~F~pm~~a~ 404 (478)
T KOG0405|consen 325 DVTGKINLTPVAIAAGRKLANRLFGGGKDTKLDYENVPCVVFSHPPIGTVGLTEEEAIEKYGKGDIKVYTSKFNPMKYAM 404 (478)
T ss_pred cccCcEecchHHHhhhhhHHHHhhcCCCCCccccccCceEEEecCCcccccCCHHHHHHHhCccceEEEecCCchhHhHh
Confidence 9999999999999999999999996 456689999999999999999999999999765 3 45555554455566666
Q ss_pred hcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHH
Q 010573 430 AIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAL 493 (507)
Q Consensus 430 ~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~ 493 (507)
.......++||++..++.+++|+|++|+++.|+++-|+.|+++|+|-.|+.+...+|||.+|.|
T Consensus 405 ~~~k~kt~mKlvc~~~~eKVvG~hm~G~~s~EilQGf~VAvKmGaTKadFD~tVaIHPTSAEEl 468 (478)
T KOG0405|consen 405 SGRKEKTLMKLVCAGKSEKVVGVHMCGDDSAEILQGFAVAVKMGATKADFDSTVAIHPTSAEEL 468 (478)
T ss_pred hcCCcceEEEEEEecCCCcEEEEEEecCCcHHHHhhhhhheecCcchhhhccceeecCCCHHHh
Confidence 6566778999999999999999999999999999999999999999999999999999999976
No 34
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-59 Score=418.94 Aligned_cols=452 Identities=31% Similarity=0.521 Sum_probs=377.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC--------CCCCceeccccccchhhhhhhhHHHHHHHhhhhhCC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR--------GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG 111 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~--------~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g 111 (507)
.+.+||++|||||.+||+||.+++..|.+|.++|-- ..+||+|.|.||||.+.+. .+.+.....+....+|
T Consensus 16 ~sydyDLIviGgGSgGLacaKeAa~~G~kV~~lDfV~PtP~GtsWGlGGTCvNVGCIPKKLMH-QAallG~al~da~kyG 94 (503)
T KOG4716|consen 16 SSYDYDLIVIGGGSGGLACAKEAADLGAKVACLDFVKPTPQGTSWGLGGTCVNVGCIPKKLMH-QAALLGEALHDARKYG 94 (503)
T ss_pred ccCCccEEEEcCCcchhhHHHHHHhcCCcEEEEeecccCCCCCccccCceeeecccccHHHHH-HHHHHHHHHHHHHhhC
Confidence 356799999999999999999999999999999841 1457999999999988664 4555566666678888
Q ss_pred cccCc--cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 112 VKFSS--VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 112 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
+...+ ...+|..+.......+..+...++-.+++..|+++...+.|+|+++...+..+|+.+.++++.++||||.+|+
T Consensus 95 W~~~e~~ikhdW~~l~~sVqnhI~s~NW~yRv~LreKkV~Y~NsygeFv~~h~I~at~~~gk~~~~ta~~fvIatG~RPr 174 (503)
T KOG4716|consen 95 WNVDEQKIKHDWNKLVKSVQNHIKSLNWGYRVQLREKKVEYINSYGEFVDPHKIKATNKKGKERFLTAENFVIATGLRPR 174 (503)
T ss_pred CCCccccccccHHHHHHHHHHHhhhccceEEEEeccceeeeeecceeecccceEEEecCCCceEEeecceEEEEecCCCC
Confidence 87754 6789998887776666666555556677788999999999999999999988888899999999999999995
Q ss_pred --CCCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh
Q 010573 190 --SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267 (507)
Q Consensus 190 --~~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~ 267 (507)
.+|| +.+.-+|++|.+.+...|.+-+|||+|++++|+|.+|..+|.+||+..|+ .+++.||.++++.+.+.|++
T Consensus 175 Yp~IpG---~~Ey~ITSDDlFsl~~~PGkTLvVGa~YVaLECAgFL~gfg~~vtVmVRS-I~LrGFDqdmae~v~~~m~~ 250 (503)
T KOG4716|consen 175 YPDIPG---AKEYGITSDDLFSLPYEPGKTLVVGAGYVALECAGFLKGFGYDVTVMVRS-ILLRGFDQDMAELVAEHMEE 250 (503)
T ss_pred CCCCCC---ceeeeecccccccccCCCCceEEEccceeeeehhhhHhhcCCCcEEEEEE-eecccccHHHHHHHHHHHHH
Confidence 4555 34677899999999999999999999999999999999999999998875 46889999999999999999
Q ss_pred cCcEEEcCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecC-CCCeecCCCCCCC
Q 010573 268 QKMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDK-MGRIPVNERFATN 345 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~-~G~i~Vd~~~~t~ 345 (507)
.||+|...+.+.+++..++ ...|......+++..+-++|.|+||+|+.+.+..++++.+|++.++ .|.|.||+.-+||
T Consensus 251 ~Gikf~~~~vp~~Veq~~~g~l~v~~k~t~t~~~~~~~ydTVl~AiGR~~~~~~l~L~~~GVk~n~ks~KI~v~~~e~t~ 330 (503)
T KOG4716|consen 251 RGIKFLRKTVPERVEQIDDGKLRVFYKNTNTGEEGEEEYDTVLWAIGRKALTDDLNLDNAGVKTNEKSGKIPVDDEEATN 330 (503)
T ss_pred hCCceeecccceeeeeccCCcEEEEeecccccccccchhhhhhhhhccccchhhcCCCccceeecccCCccccChHHhcC
Confidence 9999998888888876544 4455555444555556789999999999999999999999999964 5889999999999
Q ss_pred CCCeEEecCCC-CCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHc-CCC-EEEEEEe
Q 010573 346 IPGVYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-GVE-YRVGKFP 421 (507)
Q Consensus 346 ~~~IyA~GD~a-~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~~~-~~~~~~~ 421 (507)
+|+|||+||.. +.|.+.+.|++.|+..|+.+.+.. ...+|..+|+.+|+..|++.+|++|++|.+. |-+ .++.+--
T Consensus 331 vp~vyAvGDIl~~kpELTPvAIqsGrlLa~Rlf~gs~q~~dy~~V~TTVFTPLEy~c~GlsEE~Ai~k~g~dnievfH~~ 410 (503)
T KOG4716|consen 331 VPYVYAVGDILEDKPELTPVAIQSGRLLARRLFAGSTQLMDYDDVATTVFTPLEYGCVGLSEEDAIEKYGEDNIEVFHSY 410 (503)
T ss_pred CCceEEecceecCCcccchhhhhhchHHHHHHhcCcceeeeccCCceeeecchhccccCCCHHHHHHHhCcccEEEeecc
Confidence 99999999999 568899999999999999998654 4468999999999999999999999988653 433 3333311
Q ss_pred cCcccchhhc-CCcceEEEEEEEC-CCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHH
Q 010573 422 FLANSRAKAI-DDAEGIVKILAEK-ETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEA 496 (507)
Q Consensus 422 ~~~~~~~~~~-~~~~~~~k~~~~~-~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~ 496 (507)
|.......-. +....|+|++..+ ++.+|+|.|++|++|.|+++-++.|++.|+|..+|.+++.+||+.+|.|..+
T Consensus 411 f~P~E~~ipqrd~~~CY~K~vc~r~~~qkv~G~H~lgPnAgEV~QGfaaAlk~glt~~~l~ntigIHPt~aE~Ft~L 487 (503)
T KOG4716|consen 411 FKPLEYTIPQRDVRHCYLKAVCERDEDQKVLGLHILGPNAGEVIQGFAAALKCGLTKKDLDNTIGIHPTTAEEFTTL 487 (503)
T ss_pred ccceEEEcccccCCceEEEEeecccCCceEEEEEEecCchhHHHHHHHHHHHhcccHHHHhhcccccccchhheeEE
Confidence 2221111111 2345799999973 6679999999999999999999999999999999999999999999987543
No 35
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=100.00 E-value=2.6e-57 Score=458.44 Aligned_cols=400 Identities=20% Similarity=0.304 Sum_probs=310.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.+|||||||+||++||.+|++. +.+|+|||+++.++- ..| +|... . ..+. .
T Consensus 2 ~~VVIIGgG~aG~~aA~~l~~~~~~~~I~li~~~~~~~~----~~~~lp~~~---------------~-~~~~------~ 55 (438)
T PRK13512 2 PKIIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF----ANCALPYYI---------------G-EVVE------D 55 (438)
T ss_pred CeEEEECCcHHHHHHHHHHHhhCCCCCEEEEECCCCccc----ccCCcchhh---------------c-CccC------C
Confidence 4899999999999999999987 689999999765431 111 11100 0 0000 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEE-eEEEEecCCEEEEEccCC---ceEEEEeCeEEEccCCCCCCCCCCcc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVK-GYGKFISPSEVSVDTIEG---GNTVVKGKNIIIATGSDVKSLPGITI 196 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~d~~~~~v~~~~g---~~~~~~~d~lvlAtG~~p~~~pg~~~ 196 (507)
.... +....+.++++.+++++. .++..+|.+...|.+.++ +...+.||+||||||++|..++ .+
T Consensus 56 ~~~~----------~~~~~~~~~~~~~i~v~~~~~V~~Id~~~~~v~~~~~~~~~~~~~~yd~lviAtGs~~~~~~-~~- 123 (438)
T PRK13512 56 RKYA----------LAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSLG-FE- 123 (438)
T ss_pred HHHc----------ccCCHHHHHHhCCCEEEeCCEEEEEECCCCEEEEEECCCCcEEeeecCEEEECCCCCCCCCC-CC-
Confidence 0000 000012345667899876 477888877766665442 2346799999999999996544 32
Q ss_pred CCceEecc---hhhccc-----cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc
Q 010573 197 DEKRIVSS---TGALAL-----NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268 (507)
Q Consensus 197 ~~~~~~~~---~~~~~~-----~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~ 268 (507)
...+++. .+...+ ...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+|+++.+.+.+.|++.
T Consensus 124 -~~~~~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtli~~~~~l~~~~d~~~~~~l~~~l~~~ 202 (438)
T PRK13512 124 -SDITFTLRNLEDTDAIDQFIKANQVDKALVVGAGYISLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKR 202 (438)
T ss_pred -CCCeEEecCHHHHHHHHHHHhhcCCCEEEEECCCHHHHHHHHHHHhCCCcEEEEecccccchhcCHHHHHHHHHHHHhc
Confidence 2333433 222221 2347999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCC
Q 010573 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348 (507)
Q Consensus 269 Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~ 348 (507)
||++++++++++++. . .+++. +++++++|.|++|+|++|++++ ++..|++++++|+|.||+++||+.||
T Consensus 203 gI~i~~~~~v~~i~~--~--~v~~~-----~g~~~~~D~vl~a~G~~pn~~~--l~~~gl~~~~~G~i~Vd~~~~t~~~~ 271 (438)
T PRK13512 203 EIPYRLNEEIDAING--N--EVTFK-----SGKVEHYDMIIEGVGTHPNSKF--IESSNIKLDDKGFIPVNDKFETNVPN 271 (438)
T ss_pred CCEEEECCeEEEEeC--C--EEEEC-----CCCEEEeCEEEECcCCCcChHH--HHhcCcccCCCCcEEECCCcccCCCC
Confidence 999999999999953 2 34443 3457999999999999999987 57788998888999999999999999
Q ss_pred eEEecCCCC----------CCCcHhHHHHHHHHHHHHHcCCCC-CC-CCCCccEEEEcCCCeeeecCCHHHHHHcCCCEE
Q 010573 349 VYAIGDVIP----------GPMLAHKAEEDGVACVEFLAGKHG-HV-DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYR 416 (507)
Q Consensus 349 IyA~GD~a~----------~~~~~~~A~~~g~~aa~~i~~~~~-~~-~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~ 416 (507)
|||+|||++ .+++++.|.+||+++|+||+|... .+ .+..+|.+.|++|+++++|+|+++++.. ++.
T Consensus 272 IyA~GD~~~~~~~~~~~~~~~~la~~A~~~a~~~a~ni~g~~~~~~~~~~~~~~~~~~~~~ia~vGlte~~a~~~--~~~ 349 (438)
T PRK13512 272 IYAIGDIITSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQF--DYK 349 (438)
T ss_pred EEEeeeeEEeeeccCCCceecccchHHHHHHHHHHHHhcCCCccccCCcccceEEEEcCceEEeecCCHHHHccC--CcE
Confidence 999999985 235788899999999999998643 22 4567889999999999999999999876 466
Q ss_pred EEEEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHhcC-cCCCCChHHHHH
Q 010573 417 VGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAVLAINYDASSEDIARV-CHAHPTMSEALK 494 (507)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~~-~~~~p~~~~~~~ 494 (507)
+..+++....+.. .+++.||+|+++|+++++|||+|++|++ +.|+|+.++++|++++|++||.++ .++||+++...+
T Consensus 350 ~~~~~~~~~~~~~-~~~~~g~~klv~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~ 428 (438)
T PRK13512 350 MVEVTQGAHANYY-PGNSPLHLRVYYDTSNRKILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKD 428 (438)
T ss_pred EEEEecCCcCCCc-CCCceEEEEEEEECCCCeEEEEEEEccccHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCcccc
Confidence 6666655444433 4667899999999999999999999996 889999999999999999999997 678999996543
Q ss_pred HH
Q 010573 495 EA 496 (507)
Q Consensus 495 ~~ 496 (507)
.+
T Consensus 429 ~~ 430 (438)
T PRK13512 429 LI 430 (438)
T ss_pred HH
Confidence 33
No 36
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=100.00 E-value=3.3e-56 Score=453.96 Aligned_cols=407 Identities=27% Similarity=0.332 Sum_probs=312.7
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+|||||||+||+++|..|++.+ .+|+|||+++.++.. .| +|.. . .+. .+.
T Consensus 2 ~vvIIGgG~aGl~aA~~l~~~~~~~~Vtli~~~~~~~~~----~~~~~~~----~-------------~~~------~~~ 54 (444)
T PRK09564 2 KIIIIGGTAAGMSAAAKAKRLNKELEITVYEKTDIVSFG----ACGLPYF----V-------------GGF------FDD 54 (444)
T ss_pred eEEEECCcHHHHHHHHHHHHHCCCCcEEEEECCCcceee----cCCCceE----e-------------ccc------cCC
Confidence 7999999999999999999975 589999997655311 01 1100 0 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccC---CceEEEEeCeEEEccCCCCC--CCCCCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIE---GGNTVVKGKNIIIATGSDVK--SLPGIT 195 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~---g~~~~~~~d~lvlAtG~~p~--~~pg~~ 195 (507)
...+.....+.+++.+++++.+ .+..+|.+...+.+.+ ++...+.||+||||||++|. .+|+..
T Consensus 55 ----------~~~~~~~~~~~~~~~gv~~~~~~~V~~id~~~~~v~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~g~~ 124 (444)
T PRK09564 55 ----------PNTMIARTPEEFIKSGIDVKTEHEVVKVDAKNKTITVKNLKTGSIFNDTYDKLMIATGARPIIPPIKNIN 124 (444)
T ss_pred ----------HHHhhcCCHHHHHHCCCeEEecCEEEEEECCCCEEEEEECCCCCEEEecCCEEEECCCCCCCCCCCCCcC
Confidence 0001111124456679998765 6777765554454432 32223449999999999985 445543
Q ss_pred cCCceEecc---hhhcccc-----CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHH
Q 010573 196 IDEKRIVSS---TGALALN-----EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLE 266 (507)
Q Consensus 196 ~~~~~~~~~---~~~~~~~-----~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~ 266 (507)
. ..+++. .+...+. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.++
T Consensus 125 ~--~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~l~~~l~ 202 (444)
T PRK09564 125 L--ENVYTLKSMEDGLALKELLKDEEIKNIVIIGAGFIGLEAVEAAKHLGKNVRIIQLEDRILPDSFDKEITDVMEEELR 202 (444)
T ss_pred C--CCEEEECCHHHHHHHHHHHhhcCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEeCCcccCchhcCHHHHHHHHHHHH
Confidence 2 234433 2333322 2479999999999999999999999999999999988876 689999999999999
Q ss_pred hcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCC
Q 010573 267 KQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNI 346 (507)
Q Consensus 267 ~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~ 346 (507)
+.||++++++++++++.+++...+.. ++.++++|.+++|+|++|++++ ++..|++++++|+|.||+++||+.
T Consensus 203 ~~gI~v~~~~~v~~i~~~~~~~~v~~------~~~~i~~d~vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~ 274 (444)
T PRK09564 203 ENGVELHLNEFVKSLIGEDKVEGVVT------DKGEYEADVVIVATGVKPNTEF--LEDTGLKTLKNGAIIVDEYGETSI 274 (444)
T ss_pred HCCCEEEcCCEEEEEecCCcEEEEEe------CCCEEEcCEEEECcCCCcCHHH--HHhcCccccCCCCEEECCCcccCC
Confidence 99999999999999965443333333 2346999999999999999886 678889888889999999999999
Q ss_pred CCeEEecCCCCC----------CCcHhHHHHHHHHHHHHHcCCCCCCCCCCcc-EEEEcCCCeeeecCCHHHHHHcCCCE
Q 010573 347 PGVYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHVDYDKVP-GVVYTHPEVASVGKTEEQVKELGVEY 415 (507)
Q Consensus 347 ~~IyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p-~~~~~~~~~~~vG~~~~~~~~~~~~~ 415 (507)
|||||+|||++. +++++.|.+||+++|+||++....++....+ .+.|++|+++++|+|++++++.|+++
T Consensus 275 ~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~qg~~~a~ni~g~~~~~~~~~~~~~~~~~~~~~a~vG~t~~~a~~~g~~~ 354 (444)
T PRK09564 275 ENIYAAGDCATIYNIVSNKNVYVPLATTANKLGRMVGENLAGRHVSFKGTLGSACIKVLDLEAARTGLTEEEAKKLGIDY 354 (444)
T ss_pred CCEEEeeeEEEEEeccCCCeeeccchHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCEEEEEecCCHHHHHHCCCCe
Confidence 999999999953 4588999999999999999876555444444 45589999999999999999999999
Q ss_pred EEEEEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHhcCcCCC-CChHHHH
Q 010573 416 RVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAVLAINYDASSEDIARVCHAH-PTMSEAL 493 (507)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~~~~~~-p~~~~~~ 493 (507)
.+.+++.. ..++...+.+.+|+|+++|+++++|||+|++|++ +.++|+.++++|++++|+++|++++++| |+++|.+
T Consensus 355 ~~~~~~~~-~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~~~~~~i~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~ 433 (444)
T PRK09564 355 KTVFIKDK-NHTNYYPGQEDLYVKLIYEADTKVILGGQIIGKKGAVLRIDALAVAIYAKLTTQELGMMDFCYAPPFARTW 433 (444)
T ss_pred EEEEEecC-CCCCcCCCCceEEEEEEEECCCCeEEeEEEEcCccHHHHHHHHHHHHHCCCCHHHHhhcccccCCCCCCCc
Confidence 99887643 3444445667899999999999999999999996 8899999999999999999999998776 9999887
Q ss_pred HHHHHH
Q 010573 494 KEAAMA 499 (507)
Q Consensus 494 ~~~~~~ 499 (507)
+.+...
T Consensus 434 ~~~~~~ 439 (444)
T PRK09564 434 DALNVA 439 (444)
T ss_pred CHHHHH
Confidence 665433
No 37
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=100.00 E-value=5.8e-49 Score=398.16 Aligned_cols=344 Identities=22% Similarity=0.296 Sum_probs=276.8
Q ss_pred HHHHhCCcEEEEe-EEEEecCCEEEEEccCC-ceEEEE--eCeEEEccCCCCCC--CCCCccCCceEecchhh---ccc-
Q 010573 141 GLFKKNKVTYVKG-YGKFISPSEVSVDTIEG-GNTVVK--GKNIIIATGSDVKS--LPGITIDEKRIVSSTGA---LAL- 210 (507)
Q Consensus 141 ~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g-~~~~~~--~d~lvlAtG~~p~~--~pg~~~~~~~~~~~~~~---~~~- 210 (507)
.++++.+++++.+ .+..+|.....+.+.++ ....+. ||+||||||++|.. +||.. ...+++..+. ..+
T Consensus 52 ~~~~~~gv~~~~~~~V~~id~~~~~v~~~~~~~~~~~~~~yd~lIiATG~~p~~~~i~G~~--~~~v~~~~~~~~~~~~~ 129 (427)
T TIGR03385 52 VFIKKRGIDVKTNHEVIEVNDERQTVVVRNNKTNETYEESYDYLILSPGASPIVPNIEGIN--LDIVFTLRNLEDTDAIK 129 (427)
T ss_pred HHHHhcCCeEEecCEEEEEECCCCEEEEEECCCCCEEecCCCEEEECCCCCCCCCCCCCcC--CCCEEEECCHHHHHHHH
Confidence 3457779998755 67777755544444321 124566 99999999999853 45543 2334443332 211
Q ss_pred ----cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcC
Q 010573 211 ----NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG 285 (507)
Q Consensus 211 ----~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~ 285 (507)
...+++++|||+|++|+|+|..|++.|.+|+++++.+.+ .+.+++++.+.+.+.+++.||++++++.+++++.++
T Consensus 130 ~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 209 (427)
T TIGR03385 130 QYIDKNKVENVVIIGGGYIGIEMAEALRERGKNVTLIHRSERILNKLFDEEMNQIVEEELKKHEINLRLNEEVDSIEGEE 209 (427)
T ss_pred HHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCcEEEEECCcccCccccCHHHHHHHHHHHHHcCCEEEeCCEEEEEecCC
Confidence 134789999999999999999999999999999999887 467899999999999999999999999999997544
Q ss_pred CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCC-------
Q 010573 286 DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG------- 358 (507)
Q Consensus 286 ~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~------- 358 (507)
. + +.+. +++++++|.+++|+|.+|++++ ++.+|++++++|+|.||+++||+.|+|||+|||+..
T Consensus 210 ~-~-v~~~-----~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~~G~i~vd~~~~t~~~~Vya~GD~~~~~~~~~~~ 280 (427)
T TIGR03385 210 R-V-KVFT-----SGGVYQADMVILATGIKPNSEL--AKDSGLKLGETGAIWVNEKFQTSVPNIYAAGDVAESHNIITKK 280 (427)
T ss_pred C-E-EEEc-----CCCEEEeCEEEECCCccCCHHH--HHhcCcccCCCCCEEECCCcEeCCCCEEEeeeeEEeeeccCCC
Confidence 3 3 3333 3467999999999999999986 577889998889999999999999999999999952
Q ss_pred ---CCcHhHHHHHHHHHHHHHcCCCCCCC-CCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCc
Q 010573 359 ---PMLAHKAEEDGVACVEFLAGKHGHVD-YDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDA 434 (507)
Q Consensus 359 ---~~~~~~A~~~g~~aa~~i~~~~~~~~-~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (507)
+++++.|.+||++||+||++....++ +..+|.++|++|+++++|+|+.+|++.|+++.+..+++....++. .+.+
T Consensus 281 ~~~~~~~~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~~~a~vG~t~~~a~~~g~~~~~~~~~~~~~~~~~-~~~~ 359 (427)
T TIGR03385 281 PAWVPLAWGANKMGRIAGENIAGNDIEFKGVLGTNITKFFDLTIASTGVTENEAKKLNIDYKTVFVKAKTHANYY-PGNS 359 (427)
T ss_pred ceeeechHHHHHHHHHHHHHhcCCCCCCCCcceeeEEEEcCeEEEEecCCHHHHHHCCCCeEEEEEecCCCCCcC-CCCc
Confidence 35789999999999999998754332 225788999999999999999999999999998887655444433 3567
Q ss_pred ceEEEEEEECCCCeEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHhcCcC-CCCChHHHHHHH
Q 010573 435 EGIVKILAEKETDKILGVHIMAPN-AGELIHEAVLAINYDASSEDIARVCH-AHPTMSEALKEA 496 (507)
Q Consensus 435 ~~~~k~~~~~~~~~ilG~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~~~~-~~p~~~~~~~~~ 496 (507)
.|++|+++++++++|||+|++|++ +.|+|+.++++|++++|+++|.++++ .||.++..++.+
T Consensus 360 ~g~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~~~~ 423 (427)
T TIGR03385 360 PLHLKLIYEKDTRRILGAQAVGKEGADKRIDVLAAAIMAGLTVKDLFFFELAYAPPYSRVWDPL 423 (427)
T ss_pred eEEEEEEEECCCCeEEEEEEEccccHHHHHHHHHHHHHCCCCHHHHhhcccccCCCCCCccchH
Confidence 899999999989999999999998 99999999999999999999999985 489888655443
No 38
>PRK14989 nitrite reductase subunit NirD; Provisional
Probab=100.00 E-value=1.5e-45 Score=393.59 Aligned_cols=384 Identities=20% Similarity=0.307 Sum_probs=288.2
Q ss_pred CcEEEECCChHHHHHHHHHHHC----CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL----GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
.+|||||+|+||+.+|.+|++. +++|+||++++.++.. .+..+. .+.. ..
T Consensus 4 ~kIVIVG~G~AG~~aa~~L~~~~~~~~~~Itvi~~e~~~~Y~----r~~L~~--------------~~~~--~~------ 57 (847)
T PRK14989 4 VRLAIIGNGMVGHRFIEDLLDKADAANFDITVFCEEPRIAYD----RVHLSS--------------YFSH--HT------ 57 (847)
T ss_pred CcEEEECCCHHHHHHHHHHHhhCCCCCCeEEEEECCCCCccc----CCcchH--------------hHcC--CC------
Confidence 4899999999999999999865 4799999997664311 000000 0000 00
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCcc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI 196 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~ 196 (507)
.+.+......++++.+|+++.++ +..+|.+...|.+.+| ..+.||+||||||++|. ++||...
T Consensus 58 ------------~~~l~~~~~~~~~~~gI~~~~g~~V~~Id~~~~~V~~~~G--~~i~yD~LVIATGs~p~~p~ipG~~~ 123 (847)
T PRK14989 58 ------------AEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAG--RTVFYDKLIMATGSYPWIPPIKGSET 123 (847)
T ss_pred ------------HHHccCCCHHHHHhCCCEEEcCCEEEEEeCCCcEEEECCC--cEEECCEEEECCCCCcCCCCCCCCCC
Confidence 01111222456778899999985 6778888888888777 67999999999999985 4566543
Q ss_pred CCceEe-cchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCcE
Q 010573 197 DEKRIV-SSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 197 ~~~~~~-~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv~ 271 (507)
.+...+ +..++..+. ..+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+|++..+.+.+.|++.||+
T Consensus 124 ~~v~~~rt~~d~~~l~~~~~~~k~vvVIGgG~iGlE~A~~L~~~G~~VtvVe~~~~ll~~~ld~~~~~~l~~~L~~~GV~ 203 (847)
T PRK14989 124 QDCFVYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVR 203 (847)
T ss_pred CCeEEECCHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeccccchhhhcCHHHHHHHHHHHHHCCCE
Confidence 333333 555554432 3578999999999999999999999999999999999877 68999999999999999999
Q ss_pred EEcCceEEEEEEcC--CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCe
Q 010573 272 FMLKTKVVGVDLSG--DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (507)
Q Consensus 272 i~~~~~v~~i~~~~--~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~I 349 (507)
+++++.++++..++ ....+.+. +++++++|.|++|+|++|++.+ ++.+|++++++|+|.||++|||+.|+|
T Consensus 204 v~~~~~v~~I~~~~~~~~~~v~~~-----dG~~i~~D~Vv~A~G~rPn~~L--~~~~Gl~~~~~G~I~VD~~l~Ts~p~I 276 (847)
T PRK14989 204 VHTSKNTLEIVQEGVEARKTMRFA-----DGSELEVDFIVFSTGIRPQDKL--ATQCGLAVAPRGGIVINDSCQTSDPDI 276 (847)
T ss_pred EEcCCeEEEEEecCCCceEEEEEC-----CCCEEEcCEEEECCCcccCchH--HhhcCccCCCCCcEEECCCCcCCCCCE
Confidence 99999999997543 23345554 5678999999999999999985 678899999999999999999999999
Q ss_pred EEecCCCCCC----CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEE-EcCCCeeeecCCHHHHHHcCCCEEEEEEecCc
Q 010573 350 YAIGDVIPGP----MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV-YTHPEVASVGKTEEQVKELGVEYRVGKFPFLA 424 (507)
Q Consensus 350 yA~GD~a~~~----~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~-~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~ 424 (507)
||+|||+..+ .++..|..||++||.||+|....+.....+... +...+++++|... +.+ .
T Consensus 277 YAiGD~a~~~~~~~gl~~~a~~~a~vaa~~i~g~~~~~~g~~~~~~lk~~G~~v~s~G~~~------~~~---------~ 341 (847)
T PRK14989 277 YAIGECASWNNRVFGLVAPGYKMAQVAVDHLLGSENAFEGADLSAKLKLLGVDVGGIGDAH------GRT---------P 341 (847)
T ss_pred EEeecceeEcCcccccHHHHHHHHHHHHHHhcCCCcCCCCcccceEEEECCcceEeccccc------CCC---------C
Confidence 9999999643 378899999999999999987655555556433 4455788877311 110 0
Q ss_pred ccchh-hcC-CcceEEEEEEECCCCeEEEEEEECCCh--HHHHHHHHHHHHCCCCHHHHhcCcCC---CCCh
Q 010573 425 NSRAK-AID-DAEGIVKILAEKETDKILGVHIMAPNA--GELIHEAVLAINYDASSEDIARVCHA---HPTM 489 (507)
Q Consensus 425 ~~~~~-~~~-~~~~~~k~~~~~~~~~ilG~~~~g~~~--~~~~~~~~~~i~~~~~~~~l~~~~~~---~p~~ 489 (507)
...+. +.+ ...+|.|+++++++++|+|++++|+.+ .++++.+...+..+.+.++|....+. ||+.
T Consensus 342 ~~~~~~~~~~~~~~y~Klv~~~~~~~LlGa~lvGd~~~~~~l~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 413 (847)
T PRK14989 342 GARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHAGSGKPSI 413 (847)
T ss_pred CceeEEEEcCCCCEEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHcCCCCccchhheecCCCCCCCCCcc
Confidence 01111 123 346899999998899999999999954 67777776666666677777655443 6766
No 39
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=346.49 Aligned_cols=362 Identities=19% Similarity=0.242 Sum_probs=261.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+|||||||+||++||..|++.+. +|+||+++...... .+.-++.+ +.... ......
T Consensus 3 ~~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li~~e~~~~y~----r~~l~~~~-------------~~~~~--~~~~~~- 62 (396)
T PRK09754 3 EKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYE----RPPLSKSM-------------LLEDS--PQLQQV- 62 (396)
T ss_pred cCcEEEECChHHHHHHHHHHHhhCCCCCEEEeCCCCCCCCC----CCCCCHHH-------------HCCCC--cccccc-
Confidence 3589999999999999999999875 79999996543210 00000000 00000 000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEK 199 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~ 199 (507)
...+++.+.+++++.+ .+..+|.....+.+.+| ..+.||+||||||++|..+|.......
T Consensus 63 -----------------~~~~~~~~~~i~~~~g~~V~~id~~~~~v~~~~g--~~~~yd~LViATGs~~~~~p~~~~~~~ 123 (396)
T PRK09754 63 -----------------LPANWWQENNVHLHSGVTIKTLGRDTRELVLTNG--ESWHWDQLFIATGAAARPLPLLDALGE 123 (396)
T ss_pred -----------------CCHHHHHHCCCEEEcCCEEEEEECCCCEEEECCC--CEEEcCEEEEccCCCCCCCCCCCcCCC
Confidence 0124566789999988 46788888777877777 679999999999999976665443334
Q ss_pred eEec---chhhccccC---CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCcEE
Q 010573 200 RIVS---STGALALNE---VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKF 272 (507)
Q Consensus 200 ~~~~---~~~~~~~~~---~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv~i 272 (507)
.+++ ..++..+.. .+++++|||+|++|+|+|..|.+.|.+||++++.+++++ .+++++.+.+.+.+++.||++
T Consensus 124 ~v~~~~~~~da~~l~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i 203 (396)
T PRK09754 124 RCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRI 203 (396)
T ss_pred CEEecCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCcchhhhcCHHHHHHHHHHHHHCCCEE
Confidence 4554 445544432 478999999999999999999999999999999998876 468888899999999999999
Q ss_pred EcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEe
Q 010573 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 352 (507)
++++.+++++. ++.+.+++. +++++++|.|++++|.+|++.+ ++..|++.+ ++|.||+++||+.|||||+
T Consensus 204 ~~~~~V~~i~~-~~~~~v~l~-----~g~~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~--~gi~vd~~~~ts~~~IyA~ 273 (396)
T PRK09754 204 LLNNAIEHVVD-GEKVELTLQ-----SGETLQADVVIYGIGISANDQL--AREANLDTA--NGIVIDEACRTCDPAIFAG 273 (396)
T ss_pred EeCCeeEEEEc-CCEEEEEEC-----CCCEEECCEEEECCCCChhhHH--HHhcCCCcC--CCEEECCCCccCCCCEEEc
Confidence 99999999975 445556554 4568999999999999999875 456677664 5699999999999999999
Q ss_pred cCCCCC---------CCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEE--EcCCCeeeecCCHHHHHHcCCCEEEEEEe
Q 010573 353 GDVIPG---------PMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVEYRVGKFP 421 (507)
Q Consensus 353 GD~a~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~vG~~~~~~~~~~~~~~~~~~~ 421 (507)
|||+.. +.+|+.|..||++||+||+|.... +...|+++ .++..+.++|....+ ++ ...
T Consensus 274 GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~ni~g~~~~--~~~~p~~~~~~~~~~~~~~G~~~~~------~~-~~~-- 342 (396)
T PRK09754 274 GDVAITRLDNGALHRCESWENANNQAQIAAAAMLGLPLP--LLPPPWFWSDQYSDNLQFIGDMRGD------DW-LCR-- 342 (396)
T ss_pred cceEeeeCCCCCEEEECcHHHHHHHHHHHHHHhcCCCCC--CCCCCceEEEeCCccEEEeeCCCCC------EE-EEe--
Confidence 999942 136789999999999999987643 55555543 445688888865431 11 000
Q ss_pred cCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCH
Q 010573 422 FLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASS 476 (507)
Q Consensus 422 ~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~ 476 (507)
...+...|+.+++ ++|+|+|+..+|+. .-...+..+|+.+.++
T Consensus 343 --------~~~~~~~~~~~~~--~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~ 385 (396)
T PRK09754 343 --------GNPETQKAIWFNL--QNGVLIGAVTLNQG--REIRPIRKWIQSGKTF 385 (396)
T ss_pred --------cCCCCceEEEEEe--eCCEEEEEEEECCH--HHHHHHHHHHHCCCCC
Confidence 0012223444443 57999999999983 3355667788877663
No 40
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=100.00 E-value=1.1e-39 Score=324.69 Aligned_cols=348 Identities=22% Similarity=0.339 Sum_probs=251.1
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+++||||||+||+++|..|++. +.+|+||++++..-- ..+..+ +. +. .+.. .
T Consensus 3 ~~vvIiG~G~AG~~~a~~lr~~~~~~~Itvi~~~~~~~y----~~~~l~-------~~-------~~-~~~~-------~ 56 (377)
T PRK04965 3 NGIVIIGSGFAARQLVKNIRKQDAHIPITLITADSGDEY----NKPDLS-------HV-------FS-QGQR-------A 56 (377)
T ss_pred CCEEEECCcHHHHHHHHHHHhhCcCCCEEEEeCCCCCCc----CcCcCc-------HH-------Hh-CCCC-------H
Confidence 4899999999999999999886 468999998653210 000000 00 00 0000 0
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccC
Q 010573 122 PAMMAQKDKAVSNLTR-GIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITID 197 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~ 197 (507)
..+.. ..++++++.+++++.+ .+..+|.+...+.+ ++ ..+.||+||||||++|.. +||...
T Consensus 57 -----------~~~~~~~~~~~~~~~gv~~~~~~~V~~id~~~~~v~~-~~--~~~~yd~LVlATG~~~~~p~i~G~~~- 121 (377)
T PRK04965 57 -----------DDLTRQSAGEFAEQFNLRLFPHTWVTDIDAEAQVVKS-QG--NQWQYDKLVLATGASAFVPPIPGREL- 121 (377)
T ss_pred -----------HHhhcCCHHHHHHhCCCEEECCCEEEEEECCCCEEEE-CC--eEEeCCEEEECCCCCCCCCCCCCCce-
Confidence 11111 1245667789999876 67778877666664 34 679999999999999853 444321
Q ss_pred CceEecch---hhccc---cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-CCHHHHHHHHHHHHhcCc
Q 010573 198 EKRIVSST---GALAL---NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 198 ~~~~~~~~---~~~~~---~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-~d~~~~~~~~~~l~~~Gv 270 (507)
+++.. ++... ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.||
T Consensus 122 ---v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gV 198 (377)
T PRK04965 122 ---MLTLNSQQEYRAAETQLRDAQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASLMPPEVSSRLQHRLTEMGV 198 (377)
T ss_pred ---EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCcccchhCCHHHHHHHHHHHHhCCC
Confidence 34333 32221 134789999999999999999999999999999999988764 688899999999999999
Q ss_pred EEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
++++++++++++.+++.+.+++. +++++++|.||+|+|.+|++.+ ++..|++.+. | |.||++|||+.||||
T Consensus 199 ~i~~~~~v~~i~~~~~~~~v~~~-----~g~~i~~D~vI~a~G~~p~~~l--~~~~gl~~~~-g-i~vd~~l~ts~~~Vy 269 (377)
T PRK04965 199 HLLLKSQLQGLEKTDSGIRATLD-----SGRSIEVDAVIAAAGLRPNTAL--ARRAGLAVNR-G-IVVDSYLQTSAPDIY 269 (377)
T ss_pred EEEECCeEEEEEccCCEEEEEEc-----CCcEEECCEEEECcCCCcchHH--HHHCCCCcCC-C-EEECCCcccCCCCEE
Confidence 99999999999877666666664 5578999999999999999875 5667888764 4 999999999999999
Q ss_pred EecCCCCCC----CcHhHHHHHHHHHHHHHcCCCCCCCCCCccE-EEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcc
Q 010573 351 AIGDVIPGP----MLAHKAEEDGVACVEFLAGKHGHVDYDKVPG-VVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLAN 425 (507)
Q Consensus 351 A~GD~a~~~----~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~-~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~ 425 (507)
|+|||+..+ ..+..|..||+.||+||+|....+.....+. ..+...++.++|....+ ...+
T Consensus 270 A~GD~a~~~~~~~~~~~~a~~~g~~~a~n~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~---------- 335 (377)
T PRK04965 270 ALGDCAEINGQVLPFLQPIQLSAMALAKNLLGQNTPLKLPAMLVKVKTPELPLQLAGETQRQ----DLRW---------- 335 (377)
T ss_pred EeeecEeECCceeehHHHHHHHHHHHHHHhcCCCcccccCCccEEEecCceeeEECCCCCCC----CceE----------
Confidence 999999532 2467799999999999999876554444333 33556788898865431 0011
Q ss_pred cchhhcCCcce-EEEEEEECCCCeEEEEEEECCChHHHH
Q 010573 426 SRAKAIDDAEG-IVKILAEKETDKILGVHIMAPNAGELI 463 (507)
Q Consensus 426 ~~~~~~~~~~~-~~k~~~~~~~~~ilG~~~~g~~~~~~~ 463 (507)
.+.++..+ +.|+++ ++|+|+|+.++|+.+.+..
T Consensus 336 ---~~~~~~~~~~~~~~~--~~~~l~g~~~~g~~~~~~~ 369 (377)
T PRK04965 336 ---QINAESQGMVAKGVD--EAGQLRAFVVSEDRMKEAF 369 (377)
T ss_pred ---EEEeCCCCeEEEEEc--cCCcEEEEEEEChhHHHHH
Confidence 01122334 556655 5799999999999765543
No 41
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit.
Probab=100.00 E-value=2.7e-40 Score=354.20 Aligned_cols=371 Identities=20% Similarity=0.276 Sum_probs=270.7
Q ss_pred EEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 46 VVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 46 vvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
|||||||+||++||.+|++. +++|+|||+++.++.. .+..+. .+ ......
T Consensus 1 iVIIG~G~AG~~aa~~l~~~~~~~~~Itvi~~e~~~~y~----r~~L~~--------------~l-~g~~~~-------- 53 (785)
T TIGR02374 1 LVLVGNGMAGHRCIEEVLKLNRHMFEITIFGEEPHPNYN----RILLSS--------------VL-QGEADL-------- 53 (785)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCCeEEEEeCCCCCCcc----cccccH--------------HH-CCCCCH--------
Confidence 68999999999999999876 4699999997765321 000000 00 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCccCCc
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDEK 199 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~~~~ 199 (507)
+.+.....+++++.+++++.+ .+..+|.....|.+.+| ..+.||+||||||+.|. ++||....+.
T Consensus 54 ----------~~l~~~~~~~~~~~gv~~~~g~~V~~Id~~~k~V~~~~g--~~~~yD~LVlATGs~p~~p~ipG~~~~~v 121 (785)
T TIGR02374 54 ----------DDITLNSKDWYEKHGITLYTGETVIQIDTDQKQVITDAG--RTLSYDKLILATGSYPFILPIPGADKKGV 121 (785)
T ss_pred ----------HHccCCCHHHHHHCCCEEEcCCeEEEEECCCCEEEECCC--cEeeCCEEEECCCCCcCCCCCCCCCCCCE
Confidence 111111245677889999988 57888988888888887 78999999999999985 4556543332
Q ss_pred eE-ecchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCcEEEc
Q 010573 200 RI-VSSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 200 ~~-~~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
.. .+.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+|++..+.+.+.+++.||++++
T Consensus 122 ~~~rt~~d~~~i~~~~~~~k~vvVVGgG~~GlE~A~~L~~~G~~Vtvv~~~~~ll~~~ld~~~~~~l~~~l~~~GV~v~~ 201 (785)
T TIGR02374 122 YVFRTIEDLDAIMAMAQRFKKAAVIGGGLLGLEAAVGLQNLGMDVSVIHHAPGLMAKQLDQTAGRLLQRELEQKGLTFLL 201 (785)
T ss_pred EEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEccCCchhhhhcCHHHHHHHHHHHHHcCCEEEe
Confidence 22 2334443332 3478999999999999999999999999999999998876 68999999999999999999999
Q ss_pred CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecC
Q 010573 275 KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354 (507)
Q Consensus 275 ~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD 354 (507)
++.++++..++....+++. +++++++|.||+++|.+|++.+ ++..|++++ |+|.||++|||+.|+|||+||
T Consensus 202 ~~~v~~i~~~~~~~~v~~~-----dG~~i~~D~Vi~a~G~~Pn~~l--a~~~gl~~~--ggI~Vd~~~~Ts~p~IyA~GD 272 (785)
T TIGR02374 202 EKDTVEIVGATKADRIRFK-----DGSSLEADLIVMAAGIRPNDEL--AVSAGIKVN--RGIIVNDSMQTSDPDIYAVGE 272 (785)
T ss_pred CCceEEEEcCCceEEEEEC-----CCCEEEcCEEEECCCCCcCcHH--HHhcCCccC--CCEEECCCcccCCCCEEEeee
Confidence 9999999765544556664 4568999999999999999985 566778776 679999999999999999999
Q ss_pred CCCCC----CcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEE-EcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccch
Q 010573 355 VIPGP----MLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVV-YTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRA 428 (507)
Q Consensus 355 ~a~~~----~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~-~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (507)
|+..+ .++..|..||+++|.||+|.. .++......+.. +...+++++|....... .....
T Consensus 273 ~a~~~~~~~gl~~~a~~qa~vaA~ni~g~~~~~~~~~~~~~~lk~~g~~v~s~G~~~~~~~-----~~~~~--------- 338 (785)
T TIGR02374 273 CAEHNGRVYGLVAPLYEQAKVLADHICGVECEEYEGSDLSAKLKLLGVDVWSAGDAQETER-----TTSIK--------- 338 (785)
T ss_pred cceeCCcccccHHHHHHHHHHHHHHhcCCCCcCCCCCccceEEEECCcceEecccCCCCCC-----cEEEE---------
Confidence 99543 367889999999999999876 444333333333 56678899997653211 11111
Q ss_pred hhcC-CcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCc
Q 010573 429 KAID-DAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVC 483 (507)
Q Consensus 429 ~~~~-~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~ 483 (507)
+.+ ....|.|++++ +++|+|++++|+.. -...+..++..+..+.+...++
T Consensus 339 -~~d~~~~~y~kl~~~--~~rLlGavlvgd~~--~~~~L~~li~~~~~l~~~~~ll 389 (785)
T TIGR02374 339 -IYDEQKGIYKKLVLS--DDKLLGAVLFGDTS--DYGRLLDMVLKQADISEDPAII 389 (785)
T ss_pred -EEcCCCCEEEEEEEE--CCEEEEEEEECCHH--HHHHHHHHHHcCCCCCcChhhh
Confidence 112 23468999996 57899999999843 3455667777776665443333
No 42
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=100.00 E-value=2.5e-39 Score=311.82 Aligned_cols=284 Identities=27% Similarity=0.399 Sum_probs=228.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
++++||||||++|+.+|.+|.+.. .+|+|||+++ .+.+.++..+.....+.......+
T Consensus 3 ~~~iVIlGgGfgGl~~a~~l~~~~~~~~itLVd~~~--------------------~hl~~plL~eva~g~l~~~~i~~p 62 (405)
T COG1252 3 KKRIVILGGGFGGLSAAKRLARKLPDVEITLVDRRD--------------------YHLFTPLLYEVATGTLSESEIAIP 62 (405)
T ss_pred CceEEEECCcHHHHHHHHHhhhcCCCCcEEEEeCCC--------------------ccccchhhhhhhcCCCChhheecc
Confidence 468999999999999999999974 8999999954 233333333344444433333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC--CCCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV--KSLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p--~~~pg~~~~ 197 (507)
+ ...+... +++++.+++..+|.+..+|.+.++ ..+.||+||+|+|+.+ +.+||....
T Consensus 63 ~------------------~~~~~~~~~v~~~~~~V~~ID~~~k~V~~~~~--~~i~YD~LVvalGs~~~~fgi~G~~E~ 122 (405)
T COG1252 63 L------------------RALLRKSGNVQFVQGEVTDIDRDAKKVTLADL--GEISYDYLVVALGSETNYFGIPGAAEY 122 (405)
T ss_pred H------------------HHHhcccCceEEEEEEEEEEcccCCEEEeCCC--ccccccEEEEecCCcCCcCCCCCHHHh
Confidence 3 3455534 599999999999999999998885 7899999999999998 467887655
Q ss_pred CceEecchhhccccC-----------CC-----CeEEEEcCcHHHHHHHHHHHhcC-------------CeeEEEcccCc
Q 010573 198 EKRIVSSTGALALNE-----------VP-----KKLVVIGAGYIGLEMGSVWARLG-------------SEVTVVEFAAD 248 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~-----------~~-----~~vvVvG~G~~g~e~A~~l~~~g-------------~~Vtlv~~~~~ 248 (507)
...+.+.+|+.+++. .. .+++|+|||++|+|+|..|..+- .+|+++++.++
T Consensus 123 a~~lks~edA~~ir~~l~~~fe~a~~~~~~~~~lti~IvGgG~TGVElAgeL~~~~~~l~~~~~~~~~~~~V~LVea~p~ 202 (405)
T COG1252 123 AFGLKTLEDALRLRRHLLEAFEKASQEEDDRALLTIVIVGGGPTGVELAGELAERLHRLLKKFRVDPSELRVILVEAGPR 202 (405)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhccccccceeEEEEECCChhHHHHHHHHHHHHHHHhhhhcCCccccEEEEEccCch
Confidence 666677777654321 12 27999999999999999886541 38999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceE-EEEcCEEEEeecCCCCCCCCCCcc-c
Q 010573 249 IVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKT-ILEADVVLVSAGRTPFTAGLGLDK-I 326 (507)
Q Consensus 249 ~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~-~i~~D~vi~a~G~~p~~~~l~~~~-~ 326 (507)
++|.+++++++..++.|++.||++++++.|++++ ++++.+. ++. +++++.+||++|.+++.- .++ .
T Consensus 203 ILp~~~~~l~~~a~~~L~~~GV~v~l~~~Vt~v~--~~~v~~~-------~g~~~I~~~tvvWaaGv~a~~~---~~~l~ 270 (405)
T COG1252 203 ILPMFPPKLSKYAERALEKLGVEVLLGTPVTEVT--PDGVTLK-------DGEEEIPADTVVWAAGVRASPL---LKDLS 270 (405)
T ss_pred hccCCCHHHHHHHHHHHHHCCCEEEcCCceEEEC--CCcEEEc-------cCCeeEecCEEEEcCCCcCChh---hhhcC
Confidence 9999999999999999999999999999999994 5555554 233 699999999999999876 455 4
Q ss_pred CceecCCCCeecCCCCC-CCCCCeEEecCCCC------CCCcHhHHHHHHHHHHHHHcC
Q 010573 327 GVETDKMGRIPVNERFA-TNIPGVYAIGDVIP------GPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 327 gl~~~~~G~i~Vd~~~~-t~~~~IyA~GD~a~------~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+.+.|+.|++.||+++| +++|+|||+|||+. .|+.++.|.+||+.+|+||..
T Consensus 271 ~~e~dr~Grl~V~~~L~~~~~~~IFa~GD~A~~~~~~p~P~tAQ~A~Qqg~~~a~ni~~ 329 (405)
T COG1252 271 GLETDRRGRLVVNPTLQVPGHPDIFAAGDCAAVIDPRPVPPTAQAAHQQGEYAAKNIKA 329 (405)
T ss_pred hhhhccCCCEEeCCCcccCCCCCeEEEeccccCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence 78889899999999999 68999999999993 367899999999999999974
No 43
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=100.00 E-value=8.8e-38 Score=314.81 Aligned_cols=311 Identities=22% Similarity=0.294 Sum_probs=223.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..++++|||||||+||+.+|.+|.+.+++|+|||+++.+ .+..+..+..... .
T Consensus 7 ~~~~~~vVIvGgG~aGl~~a~~L~~~~~~ItlI~~~~~~--------------------~~~~~l~~~~~g~-------~ 59 (424)
T PTZ00318 7 RLKKPNVVVLGTGWAGAYFVRNLDPKKYNITVISPRNHM--------------------LFTPLLPQTTTGT-------L 59 (424)
T ss_pred CCCCCeEEEECCCHHHHHHHHHhCcCCCeEEEEcCCCCc--------------------chhhhHHHhcccC-------C
Confidence 345579999999999999999998778999999995432 1111111111111 1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEc----------cCCceEEEEeCeEEEccCCCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDT----------IEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~----------~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
+.. .+...+...++..+++++.+++..+|.+...|.+ .++ .++.||+||||||+.|.
T Consensus 60 ~~~-----------~~~~~~~~~~~~~~~~~i~~~V~~Id~~~~~v~~~~~~~~~~~~~~g--~~i~yD~LViAtGs~~~ 126 (424)
T PTZ00318 60 EFR-----------SICEPVRPALAKLPNRYLRAVVYDVDFEEKRVKCGVVSKSNNANVNT--FSVPYDKLVVAHGARPN 126 (424)
T ss_pred ChH-----------HhHHHHHHHhccCCeEEEEEEEEEEEcCCCEEEEecccccccccCCc--eEecCCEEEECCCcccC
Confidence 111 1111233456667899999999999877766655 233 68999999999999984
Q ss_pred --CCCCCccCCceEecchhhcccc--------------------CCCCeEEEEcCcHHHHHHHHHHHh------------
Q 010573 190 --SLPGITIDEKRIVSSTGALALN--------------------EVPKKLVVIGAGYIGLEMGSVWAR------------ 235 (507)
Q Consensus 190 --~~pg~~~~~~~~~~~~~~~~~~--------------------~~~~~vvVvG~G~~g~e~A~~l~~------------ 235 (507)
.+||.......+.+..++..+. ...++++|||+|++|+|+|..+..
T Consensus 127 ~~~ipG~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~GvE~A~~l~~~~~~~~~~~~~~ 206 (424)
T PTZ00318 127 TFNIPGVEERAFFLKEVNHARGIRKRIVQCIERASLPTTSVEERKRLLHFVVVGGGPTGVEFAAELADFFRDDVRNLNPE 206 (424)
T ss_pred CCCCCCHHHcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCChHHHhccCEEEEECCCHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 4566542111222222222110 112489999999999999999875
Q ss_pred --cCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeec
Q 010573 236 --LGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG 313 (507)
Q Consensus 236 --~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G 313 (507)
.+.+|+++++.+++++.+++++.+.+++.|++.||+++++++|+++.. +. +.++ +++++++|.+|+++|
T Consensus 207 ~~~~~~Vtlv~~~~~ll~~~~~~~~~~~~~~L~~~gV~v~~~~~v~~v~~--~~--v~~~-----~g~~i~~d~vi~~~G 277 (424)
T PTZ00318 207 LVEECKVTVLEAGSEVLGSFDQALRKYGQRRLRRLGVDIRTKTAVKEVLD--KE--VVLK-----DGEVIPTGLVVWSTG 277 (424)
T ss_pred ccccCEEEEEcCCCcccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEeC--CE--EEEC-----CCCEEEccEEEEccC
Confidence 378999999999999999999999999999999999999999999953 33 3443 456899999999999
Q ss_pred CCCCCCCCCCcccCceecCCCCeecCCCCC-CCCCCeEEecCCCCC-----CCcHhHHHHHHHHHHHHHcCCCCCCCCCC
Q 010573 314 RTPFTAGLGLDKIGVETDKMGRIPVNERFA-TNIPGVYAIGDVIPG-----PMLAHKAEEDGVACVEFLAGKHGHVDYDK 387 (507)
Q Consensus 314 ~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~-t~~~~IyA~GD~a~~-----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 387 (507)
.+|+. + ++.++++++++|+|.||+++| |++|||||+|||+.. |..+..|.+||+.+|+||.......+ ..
T Consensus 278 ~~~~~-~--~~~~~l~~~~~G~I~Vd~~l~~~~~~~IfAiGD~a~~~~~~~~~~~~~A~~qg~~~A~ni~~~l~g~~-~~ 353 (424)
T PTZ00318 278 VGPGP-L--TKQLKVDKTSRGRISVDDHLRVKPIPNVFALGDCAANEERPLPTLAQVASQQGVYLAKEFNNELKGKP-MS 353 (424)
T ss_pred CCCcc-h--hhhcCCcccCCCcEEeCCCcccCCCCCEEEEeccccCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCC-CC
Confidence 99984 3 567788888889999999999 699999999999963 56889999999999999974321101 12
Q ss_pred ccEEEEcCCCeeeecC
Q 010573 388 VPGVVYTHPEVASVGK 403 (507)
Q Consensus 388 ~p~~~~~~~~~~~vG~ 403 (507)
.|+.....+.+.++|.
T Consensus 354 ~~~~~~~~g~~~~lG~ 369 (424)
T PTZ00318 354 KPFVYRSLGSLAYLGN 369 (424)
T ss_pred CCCeecCCceEEEecC
Confidence 3333333345556654
No 44
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (PFAM:PF00070).
Probab=100.00 E-value=2.1e-36 Score=292.95 Aligned_cols=290 Identities=26% Similarity=0.321 Sum_probs=211.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
|||+|||||+||++||..|++.|++|+|||+++ .||.+.....+.. + .++.. ....
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~----------------~--~~~~~---~~~~-- 56 (300)
T TIGR01292 1 YDVIIIGAGPAGLTAAIYAARANLKTLIIEGME-PGGQLTTTTEVEN----------------Y--PGFPE---GISG-- 56 (300)
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEeccC-CCcceeecccccc----------------c--CCCCC---CCCh--
Confidence 699999999999999999999999999999865 7776653221100 0 00000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCC--EEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCcc-CC
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI-DE 198 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~--~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~-~~ 198 (507)
..+...+.+.+++.+++++...+..++.. .+.+.+.++ ..+.||+||+|||+.|. .+|+... ..
T Consensus 57 ---------~~~~~~l~~~~~~~gv~~~~~~v~~v~~~~~~~~v~~~~~--~~~~~d~liiAtG~~~~~~~i~g~~~~~~ 125 (300)
T TIGR01292 57 ---------PELMEKMKEQAVKFGAEIIYEEVIKVDLSDRPFKVKTGDG--KEYTAKAVIIATGASARKLGIPGEDEFLG 125 (300)
T ss_pred ---------HHHHHHHHHHHHHcCCeEEEEEEEEEEecCCeeEEEeCCC--CEEEeCEEEECCCCCcccCCCCChhhcCC
Confidence 11223344566777899888767666543 456666665 68999999999999874 3455331 11
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc-CcEEEcCce
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ-KMKFMLKTK 277 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~i~~~~~ 277 (507)
..+............+++++|||+|.+|+|+|..+.+.+.+|+++++.+.+. .+ ..+.+.+++. ||+++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~~~~V~~v~~~~~~~--~~----~~~~~~l~~~~gv~~~~~~~ 199 (300)
T TIGR01292 126 RGVSYCATCDGPFFKNKEVAVVGGGDSAIEEALYLTRIAKKVTLVHRRDKFR--AE----KILLDRLRKNPNIEFLWNST 199 (300)
T ss_pred ccEEEeeecChhhcCCCEEEEECCChHHHHHHHHHHhhcCEEEEEEeCcccC--cC----HHHHHHHHhCCCeEEEeccE
Confidence 2222222111122347899999999999999999999999999999887543 12 3345566676 999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 278 v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
+++++.++....+++.+..++++.++++|.+++|+|++|+.++ ++.. +.++++|++.||++++|++|||||+|||++
T Consensus 200 v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~~~~~~--l~~~-~~~~~~g~i~v~~~~~t~~~~vya~GD~~~ 276 (300)
T TIGR01292 200 VKEIVGDNKVEGVKIKNTVTGEEEELKVDGVFIAIGHEPNTEL--LKGL-LELDEGGYIVTDEGMRTSVPGVFAAGDVRD 276 (300)
T ss_pred EEEEEccCcEEEEEEEecCCCceEEEEccEEEEeeCCCCChHH--HHHh-heecCCCcEEECCCCccCCCCEEEeecccC
Confidence 9999865533345554434456678999999999999999976 3444 677888999999999999999999999998
Q ss_pred -CCCcHhHHHHHHHHHHHHHc
Q 010573 358 -GPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 358 -~~~~~~~A~~~g~~aa~~i~ 377 (507)
.+..+..|+.||+.||.+|.
T Consensus 277 ~~~~~~~~A~~~g~~aa~~i~ 297 (300)
T TIGR01292 277 KGYRQAVTAAGDGCIAALSAE 297 (300)
T ss_pred cchhhhhhhhhhHHHHHHHHH
Confidence 57789999999999999986
No 45
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=100.00 E-value=9.9e-36 Score=306.51 Aligned_cols=292 Identities=29% Similarity=0.392 Sum_probs=214.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...|||+||||||||++||..|++.|++|+||++ .+||++.....++. + .+.. ...
T Consensus 210 ~~~~dVvIIGgGpAGl~AA~~la~~G~~v~li~~--~~GG~~~~~~~~~~----------------~--~~~~----~~~ 265 (515)
T TIGR03140 210 LDPYDVLVVGGGPAGAAAAIYAARKGLRTAMVAE--RIGGQVKDTVGIEN----------------L--ISVP----YTT 265 (515)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEec--CCCCccccCcCccc----------------c--cccC----CCC
Confidence 4569999999999999999999999999999975 58887653211100 0 0000 011
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT 195 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~ 195 (507)
+. .+...+.+.+++.+++++.+ .+..++ .+.+.+.+.+| ..+.||++|+|||+.|. .+||..
T Consensus 266 ~~-----------~l~~~l~~~l~~~gv~i~~~~~V~~I~~~~~~~~v~~~~g--~~i~~d~lIlAtGa~~~~~~ipG~~ 332 (515)
T TIGR03140 266 GS-----------QLAANLEEHIKQYPIDLMENQRAKKIETEDGLIVVTLESG--EVLKAKSVIVATGARWRKLGVPGEK 332 (515)
T ss_pred HH-----------HHHHHHHHHHHHhCCeEEcCCEEEEEEecCCeEEEEECCC--CEEEeCEEEECCCCCcCCCCCCCHH
Confidence 11 12233445566678998876 455443 34566776666 57999999999999874 345432
Q ss_pred -cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh-cCcEEE
Q 010573 196 -IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKMKFM 273 (507)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~i~ 273 (507)
.....++...........+++++|||+|++|+|+|..|++.+.+|+++++.+.+.. ...+.+.+++ .||+++
T Consensus 333 ~~~~~~v~~~~~~~~~~~~~k~VvViGgG~~g~E~A~~L~~~g~~Vtli~~~~~l~~------~~~l~~~l~~~~gV~i~ 406 (515)
T TIGR03140 333 EYIGKGVAYCPHCDGPFFKGKDVAVIGGGNSGIEAAIDLAGIVRHVTVLEFADELKA------DKVLQDKLKSLPNVDIL 406 (515)
T ss_pred HcCCCeEEEeeccChhhcCCCEEEEECCcHHHHHHHHHHHhcCcEEEEEEeCCcCCh------hHHHHHHHhcCCCCEEE
Confidence 11223333222222223579999999999999999999999999999998876532 2345666765 699999
Q ss_pred cCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEe
Q 010573 274 LKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (507)
Q Consensus 274 ~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 352 (507)
+++.+++++.+++.+. +++.+..+++.+++++|.|++++|++|+++++ +.. ++++++|+|.||+++||++|+|||+
T Consensus 407 ~~~~v~~i~~~~~~v~~v~~~~~~~~~~~~i~~D~vi~a~G~~Pn~~~l--~~~-~~~~~~G~I~vd~~~~Ts~p~IyAa 483 (515)
T TIGR03140 407 TSAQTTEIVGDGDKVTGIRYQDRNSGEEKQLDLDGVFVQIGLVPNTEWL--KDA-VELNRRGEIVIDERGRTSVPGIFAA 483 (515)
T ss_pred ECCeeEEEEcCCCEEEEEEEEECCCCcEEEEEcCEEEEEeCCcCCchHH--hhh-cccCCCCeEEECCCCCCCCCCEEEc
Confidence 9999999987655554 66655444555789999999999999999874 444 7788889999999999999999999
Q ss_pred cCCCCCC-CcHhHHHHHHHHHHHHHcC
Q 010573 353 GDVIPGP-MLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 353 GD~a~~~-~~~~~A~~~g~~aa~~i~~ 378 (507)
|||++.+ ..+..|+.+|..||.++..
T Consensus 484 GDv~~~~~~~~~~A~~~G~~Aa~~i~~ 510 (515)
T TIGR03140 484 GDVTTVPYKQIIIAMGEGAKAALSAFD 510 (515)
T ss_pred ccccCCccceEEEEEccHHHHHHHHHH
Confidence 9999765 4677899999999998864
No 46
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=100.00 E-value=2.5e-35 Score=305.58 Aligned_cols=292 Identities=25% Similarity=0.308 Sum_probs=205.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...|||+||||||||++||..|++.|++|+|||+ ..+||+|....++... .+.. ...
T Consensus 2 ~~~yDVvIIGgGpAGL~AA~~lar~g~~V~liE~-~~~GG~~~~~~~i~~~------------------pg~~----~~~ 58 (555)
T TIGR03143 2 EEIYDLIIIGGGPAGLSAGIYAGRAKLDTLIIEK-DDFGGQITITSEVVNY------------------PGIL----NTT 58 (555)
T ss_pred CCcCcEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCceEEeccccccC------------------CCCc----CCC
Confidence 3469999999999999999999999999999999 5789987654332110 0000 001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCC--EEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc-
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT- 195 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~--~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~- 195 (507)
. ..+...+....+..+++++.+.+..++.. ...+.+.++ .+.+++||||||++|. .+||..
T Consensus 59 ~-----------~~l~~~l~~~~~~~gv~~~~~~V~~i~~~~~~~~V~~~~g---~~~a~~lVlATGa~p~~~~ipG~~~ 124 (555)
T TIGR03143 59 G-----------PELMQEMRQQAQDFGVKFLQAEVLDVDFDGDIKTIKTARG---DYKTLAVLIATGASPRKLGFPGEEE 124 (555)
T ss_pred H-----------HHHHHHHHHHHHHcCCEEeccEEEEEEecCCEEEEEecCC---EEEEeEEEECCCCccCCCCCCCHHH
Confidence 1 11223334455667888887777666543 345555444 4789999999999985 345532
Q ss_pred cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcC
Q 010573 196 IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~ 275 (507)
.....++.+..+......+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ++... .+.++..||+++++
T Consensus 125 ~~~~~v~~~~~~~~~~~~g~~VvVIGgG~~g~E~A~~L~~~g~~Vtli~~~~~~~~--~~~~~---~~~~~~~gV~i~~~ 199 (555)
T TIGR03143 125 FTGRGVAYCATCDGEFFTGMDVFVIGGGFAAAEEAVFLTRYASKVTVIVREPDFTC--AKLIA---EKVKNHPKIEVKFN 199 (555)
T ss_pred hCCceEEEEeecChhhcCCCEEEEECCCHHHHHHHHHHHccCCEEEEEEeCCcccc--CHHHH---HHHHhCCCcEEEeC
Confidence 12223333222222223589999999999999999999999999999999876522 22222 33345579999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEE--EcCE----EEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCe
Q 010573 276 TKVVGVDLSGDGVKLTLEPAAGGEKTIL--EADV----VLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (507)
Q Consensus 276 ~~v~~i~~~~~~v~v~~~~~~~g~~~~i--~~D~----vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~I 349 (507)
+.|+++..++....+.+.+..+|+..++ ++|. |++++|++|++.++ + .+++++++|+|.||++++|++|+|
T Consensus 200 ~~V~~i~~~~~v~~v~~~~~~~G~~~~~~~~~D~~~~~Vi~a~G~~Pn~~l~--~-~~l~l~~~G~I~vd~~~~Ts~p~I 276 (555)
T TIGR03143 200 TELKEATGDDGLRYAKFVNNVTGEITEYKAPKDAGTFGVFVFVGYAPSSELF--K-GVVELDKRGYIPTNEDMETNVPGV 276 (555)
T ss_pred CEEEEEEcCCcEEEEEEEECCCCCEEEEeccccccceEEEEEeCCCCChhHH--h-hhcccCCCCeEEeCCccccCCCCE
Confidence 9999997544322344433333443443 3776 99999999999863 3 357888889999999999999999
Q ss_pred EEecCCCC-CCCcHhHHHHHHHHHHHHHc
Q 010573 350 YAIGDVIP-GPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 350 yA~GD~a~-~~~~~~~A~~~g~~aa~~i~ 377 (507)
||+|||+. .+..+..|+.||+.||.+|.
T Consensus 277 yAaGDv~~~~~~~v~~A~~~G~~Aa~~i~ 305 (555)
T TIGR03143 277 YAAGDLRPKELRQVVTAVADGAIAATSAE 305 (555)
T ss_pred EEceeccCCCcchheeHHhhHHHHHHHHH
Confidence 99999985 34467789999999999984
No 47
>PRK10262 thioredoxin reductase; Provisional
Probab=100.00 E-value=2.5e-35 Score=287.24 Aligned_cols=297 Identities=20% Similarity=0.244 Sum_probs=210.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
....+||+||||||||++||..|+++|+++++||+ ...||.|.....+. .++......
T Consensus 3 ~~~~~~vvIIGgGpaGl~aA~~l~~~g~~~~~ie~-~~~gg~~~~~~~~~---------------------~~~~~~~~~ 60 (321)
T PRK10262 3 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTTTEVE---------------------NWPGDPNDL 60 (321)
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCeEEEEe-ecCCCceecCceEC---------------------CCCCCCCCC
Confidence 34568999999999999999999999999999996 56788765432110 000000112
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~ 195 (507)
+...+ ...+.......++++..+.+..++ ...+.+...+ ..+.||+||+|||+.|.. +|+..
T Consensus 61 ~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~v~~~~---~~~~~d~vilAtG~~~~~~~i~g~~ 126 (321)
T PRK10262 61 TGPLL-----------MERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDS---GEYTCDALIIATGASARYLGLPSEE 126 (321)
T ss_pred CHHHH-----------HHHHHHHHHHCCCEEEeeEEEEEEecCCeEEEEecC---CEEEECEEEECCCCCCCCCCCCCHH
Confidence 22222 222234444556666666544443 3344454332 368999999999999853 45432
Q ss_pred -cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 010573 196 -IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
.....+............+++++|||+|.+|+|+|..|++.+++|+++++.+.+. .++.+.+.+.+.+++.||++++
T Consensus 127 ~~~~~~v~~~~~~~~~~~~g~~vvVvGgG~~g~e~A~~l~~~~~~Vtlv~~~~~~~--~~~~~~~~~~~~l~~~gV~i~~ 204 (321)
T PRK10262 127 AFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHT 204 (321)
T ss_pred HcCCCcEEEeecCCHHHcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEECCccC--CCHHHHHHHHhhccCCCeEEEe
Confidence 1222333333333333458999999999999999999999999999999987652 3567788889999999999999
Q ss_pred CceEEEEEEcCCeE-EEEEeecC-CCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCC-----CCCCCCC
Q 010573 275 KTKVVGVDLSGDGV-KLTLEPAA-GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNE-----RFATNIP 347 (507)
Q Consensus 275 ~~~v~~i~~~~~~v-~v~~~~~~-~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~-----~~~t~~~ 347 (507)
++.+++++.++.++ .+++.+.. +++.+++++|.|++++|++|+..++ + .++.++ +|+|.||+ +++|++|
T Consensus 205 ~~~v~~v~~~~~~~~~v~~~~~~~~~~~~~i~~D~vv~a~G~~p~~~l~--~-~~l~~~-~g~i~vd~~~~~~~~~t~~~ 280 (321)
T PRK10262 205 NRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHGNATQTSIP 280 (321)
T ss_pred CCEEEEEEcCCccEEEEEEEEcCCCCeEEEEECCEEEEEeCCccChhHh--h-cccccc-CCEEEECCCCcccccccCCC
Confidence 99999997665433 35554322 2234689999999999999999853 2 245554 58899997 7899999
Q ss_pred CeEEecCCCCC-CCcHhHHHHHHHHHHHHHcC
Q 010573 348 GVYAIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 348 ~IyA~GD~a~~-~~~~~~A~~~g~~aa~~i~~ 378 (507)
||||+|||++. +.....|+.+|..||..|..
T Consensus 281 ~VyA~GD~~~~~~~~~~~A~~~g~~Aa~~~~~ 312 (321)
T PRK10262 281 GVFAAGDVMDHIYRQAITSAGTGCMAALDAER 312 (321)
T ss_pred CEEECeeccCCCcceEEEEehhHHHHHHHHHH
Confidence 99999999964 45667799999999988753
No 48
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion]
Probab=100.00 E-value=1.7e-35 Score=294.39 Aligned_cols=373 Identities=23% Similarity=0.262 Sum_probs=274.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..+++|||.|+||..+..++.+. -++|+++-.++.....-... + +.+.. ..
T Consensus 3 k~klvvvGnGmag~r~iEell~~~~~~~~iTvfg~Ep~~nY~Ri~L---------s---------~vl~~--------~~ 56 (793)
T COG1251 3 KQKLVIIGNGMAGHRTIEELLESAPDLYDITVFGEEPRPNYNRILL---------S---------SVLAG--------EK 56 (793)
T ss_pred ceeEEEEecccchhhHHHHHHhcCcccceEEEeccCCCccccceee---------c---------cccCC--------Cc
Confidence 35899999999999999999884 47899998765442211000 0 00000 00
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDE 198 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~ 198 (507)
+ .+++.-.-.+|+++++|+++.+ .+.++|+....|.++.| ..+.||+||+||||.|+.+|....+.
T Consensus 57 ~-----------~edi~l~~~dwy~~~~i~L~~~~~v~~idr~~k~V~t~~g--~~~~YDkLilATGS~pfi~PiPG~~~ 123 (793)
T COG1251 57 T-----------AEDISLNRNDWYEENGITLYTGEKVIQIDRANKVVTTDAG--RTVSYDKLIIATGSYPFILPIPGSDL 123 (793)
T ss_pred c-----------HHHHhccchhhHHHcCcEEEcCCeeEEeccCcceEEccCC--cEeecceeEEecCccccccCCCCCCC
Confidence 1 2233333468999999999998 58999999999999998 89999999999999997665444333
Q ss_pred ceEe---cchhhccc---cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-CCCCHHHHHHHHHHHHhcCcE
Q 010573 199 KRIV---SSTGALAL---NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-PSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 199 ~~~~---~~~~~~~~---~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
..++ +.+|...+ ....++.+|||+|..|+|+|..|.+.|.++++++..+.++ .++|+.....+++.+++.|++
T Consensus 124 ~~v~~~R~i~D~~am~~~ar~~~~avVIGGGLLGlEaA~~L~~~Gm~~~Vvh~~~~lMerQLD~~ag~lL~~~le~~Gi~ 203 (793)
T COG1251 124 PGVFVYRTIDDVEAMLDCARNKKKAVVIGGGLLGLEAARGLKDLGMEVTVVHIAPTLMERQLDRTAGRLLRRKLEDLGIK 203 (793)
T ss_pred CCeeEEecHHHHHHHHHHHhccCCcEEEccchhhhHHHHHHHhCCCceEEEeecchHHHHhhhhHHHHHHHHHHHhhcce
Confidence 3344 44444322 2335668999999999999999999999999999999885 489999999999999999999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
++++...+++.+.+....+.+. +++.+++|.|++|+|.+||+.+ ...+|+..++ +|.||++||||+|+|||
T Consensus 204 ~~l~~~t~ei~g~~~~~~vr~~-----DG~~i~ad~VV~a~GIrPn~el--a~~aGlavnr--GIvvnd~mqTsdpdIYA 274 (793)
T COG1251 204 VLLEKNTEEIVGEDKVEGVRFA-----DGTEIPADLVVMAVGIRPNDEL--AKEAGLAVNR--GIVVNDYMQTSDPDIYA 274 (793)
T ss_pred eecccchhhhhcCcceeeEeec-----CCCcccceeEEEecccccccHh--HHhcCcCcCC--CeeecccccccCCCeee
Confidence 9999999888775555567776 7789999999999999999996 6788999987 79999999999999999
Q ss_pred ecCCCC----CCCcHhHHHHHHHHHHHHHcCCCCCCCCCC-ccEEE--EcCCCeeeecCCHHHHHHcCCCEEEEEEecCc
Q 010573 352 IGDVIP----GPMLAHKAEEDGVACVEFLAGKHGHVDYDK-VPGVV--YTHPEVASVGKTEEQVKELGVEYRVGKFPFLA 424 (507)
Q Consensus 352 ~GD~a~----~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~-~p~~~--~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~ 424 (507)
+|+|+. .+.+...+..|++.+|+++++.... .|.. .++.. .+.-++.+.|.-. + ..+-+..
T Consensus 275 vGEcae~~g~~yGLVaP~yeq~~v~a~hl~~~~~~-~y~gsv~stkLKv~Gvdl~S~GD~~-e--~~~~~~i-------- 342 (793)
T COG1251 275 VGECAEHRGKVYGLVAPLYEQAKVLADHLCGGEAE-AYEGSVTSTKLKVSGVDVFSAGDFQ-E--TEGAESI-------- 342 (793)
T ss_pred hhhHHHhcCccceehhHHHHHHHHHHHHhccCccc-ccccccchhhhcccccceeeccchh-h--cCCCceE--------
Confidence 999994 3568889999999999999987543 1211 11111 1122344444222 1 1111111
Q ss_pred ccchhhcCCc-ceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCc
Q 010573 425 NSRAKAIDDA-EGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVC 483 (507)
Q Consensus 425 ~~~~~~~~~~-~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~ 483 (507)
.+.+.. ..|.|+++ ++++|+|+.++|+-+. =+.+-.+|..+.+++++.+..
T Consensus 343 ----v~~D~~~~iYKrlvL--~dd~IvgavL~GDt~d--~~~l~~li~~~~~~se~r~~l 394 (793)
T COG1251 343 ----VFRDEQRGIYKKLVL--KDDKIVGAVLYGDTSD--GGWLLDLILKGADISEIRDTL 394 (793)
T ss_pred ----EEecccccceeEEEE--eCCeEEEEEEEeeccc--chHHHHHHhcCCCccccchhh
Confidence 112333 34777877 5679999999999432 234667888899988887653
No 49
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=100.00 E-value=9e-35 Score=299.83 Aligned_cols=292 Identities=31% Similarity=0.437 Sum_probs=216.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...|||+||||||||++||.+|++.|++|+||++ .+||+|.....++. + .++. ...
T Consensus 209 ~~~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~--~~GG~~~~~~~~~~----------------~--~~~~----~~~ 264 (517)
T PRK15317 209 KDPYDVLVVGGGPAGAAAAIYAARKGIRTGIVAE--RFGGQVLDTMGIEN----------------F--ISVP----ETE 264 (517)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEec--CCCCeeeccCcccc----------------c--CCCC----CCC
Confidence 4569999999999999999999999999999986 48998753211110 0 0000 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--CEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT 195 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~ 195 (507)
+. ++...+...+++.++++..+ .+..++. +.+.+.+.++ ..+.||+||+|||++|+ .+|+..
T Consensus 265 ~~-----------~l~~~l~~~~~~~gv~i~~~~~V~~I~~~~~~~~V~~~~g--~~i~a~~vViAtG~~~r~~~ipG~~ 331 (517)
T PRK15317 265 GP-----------KLAAALEEHVKEYDVDIMNLQRASKLEPAAGLIEVELANG--AVLKAKTVILATGARWRNMNVPGED 331 (517)
T ss_pred HH-----------HHHHHHHHHHHHCCCEEEcCCEEEEEEecCCeEEEEECCC--CEEEcCEEEECCCCCcCCCCCCCHH
Confidence 22 23344456677778988866 4555544 3566776666 57999999999999875 345532
Q ss_pred -cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh-cCcEEE
Q 010573 196 -IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKMKFM 273 (507)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~i~ 273 (507)
.....++...........+++++|||+|.+|+|+|..|+..+.+|+++++.+.+.. + ..+.+.+.+ .||+++
T Consensus 332 ~~~~~~v~~~~~~~~~~~~gk~VvVVGgG~~g~e~A~~L~~~~~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gI~i~ 405 (517)
T PRK15317 332 EYRNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVKHVTVLEFAPELKA--D----QVLQDKLRSLPNVTII 405 (517)
T ss_pred HhcCceEEEeeccCchhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEECccccc--c----HHHHHHHhcCCCcEEE
Confidence 22333333322222233579999999999999999999999999999998876532 2 334555655 699999
Q ss_pred cCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEe
Q 010573 274 LKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (507)
Q Consensus 274 ~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 352 (507)
+++.+++++.+++.+. +++.+..+++.+++++|.+++++|++|+++++ +.. ++++++|+|.||+++||++||||||
T Consensus 406 ~~~~v~~i~~~~g~v~~v~~~~~~~g~~~~i~~D~v~~~~G~~p~~~~l--~~~-v~~~~~g~i~vd~~l~Ts~p~IyAa 482 (517)
T PRK15317 406 TNAQTTEVTGDGDKVTGLTYKDRTTGEEHHLELEGVFVQIGLVPNTEWL--KGT-VELNRRGEIIVDARGATSVPGVFAA 482 (517)
T ss_pred ECcEEEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeECCccCchHH--hhh-eeeCCCCcEEECcCCCCCCCCEEEC
Confidence 9999999987655543 66655445555689999999999999999874 444 7788889999999999999999999
Q ss_pred cCCCCCC-CcHhHHHHHHHHHHHHHcC
Q 010573 353 GDVIPGP-MLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 353 GD~a~~~-~~~~~A~~~g~~aa~~i~~ 378 (507)
|||+..+ .....|+.+|..||.++..
T Consensus 483 GDv~~~~~k~~~~A~~eG~~Aa~~~~~ 509 (517)
T PRK15317 483 GDCTTVPYKQIIIAMGEGAKAALSAFD 509 (517)
T ss_pred ccccCCCCCEEEEhhhhHHHHHHHHHH
Confidence 9999754 5788899999999988864
No 50
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.9e-35 Score=274.64 Aligned_cols=288 Identities=28% Similarity=0.356 Sum_probs=214.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCc-EEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhC-CcccCcccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLK-TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH-GVKFSSVEV 119 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~-V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 119 (507)
..|||+||||||||++||.+++|.+.+ ++|+|+ ...||+......+ ..+ |+.. ..
T Consensus 2 ~~~DviIIG~GPAGl~AAiya~r~~l~~~li~~~-~~~gg~~~~~~~v-------------------enypg~~~---~~ 58 (305)
T COG0492 2 KIYDVIIIGGGPAGLTAAIYAARAGLKVVLILEG-GEPGGQLTKTTDV-------------------ENYPGFPG---GI 58 (305)
T ss_pred ceeeEEEECCCHHHHHHHHHHHHcCCCcEEEEec-CCcCCccccceee-------------------cCCCCCcc---CC
Confidence 458999999999999999999999999 555555 6677653322111 111 1110 11
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCC--EEEEEccCCceEEEEeCeEEEccCCCCC--CCCCC-
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGI- 194 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~--~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~- 194 (507)
.. ..+...+.++.+..++++....+..++.. .+.|.+.++ . +.+++||||||..++ .+|+.
T Consensus 59 ~g-----------~~L~~~~~~~a~~~~~~~~~~~v~~v~~~~~~F~v~t~~~--~-~~ak~vIiAtG~~~~~~~~~~e~ 124 (305)
T COG0492 59 LG-----------PELMEQMKEQAEKFGVEIVEDEVEKVELEGGPFKVKTDKG--T-YEAKAVIIATGAGARKLGVPGEE 124 (305)
T ss_pred ch-----------HHHHHHHHHHHhhcCeEEEEEEEEEEeecCceEEEEECCC--e-EEEeEEEECcCCcccCCCCCcch
Confidence 11 22334445666678899888777666554 677888877 4 999999999998874 34432
Q ss_pred ccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc-CcEEE
Q 010573 195 TIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ-KMKFM 273 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~i~ 273 (507)
+..+..+..+..+.. ...+++++|||+|.+++|.|..|.+.+++||+++|++.+.+ . +.+.+.+++. +|+++
T Consensus 125 e~~g~gv~yc~~cdg-~~~~k~v~ViGgG~sAve~Al~L~~~a~~Vtlv~r~~~~ra--~----~~~~~~l~~~~~i~~~ 197 (305)
T COG0492 125 EFEGKGVSYCATCDG-FFKGKDVVVIGGGDSAVEEALYLSKIAKKVTLVHRRDEFRA--E----EILVERLKKNVKIEVL 197 (305)
T ss_pred hhcCCceEEeeecCc-cccCCeEEEEcCCHHHHHHHHHHHHhcCeEEEEecCcccCc--C----HHHHHHHHhcCCeEEE
Confidence 244455665555555 55678999999999999999999999999999999987654 3 3344445544 89999
Q ss_pred cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEec
Q 010573 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (507)
Q Consensus 274 ~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~G 353 (507)
+++.+.++.+++ .-.+.+++.. +....+.+|-+++++|..|++.+ +...+. ++++|+|+||+.++||+|||||||
T Consensus 198 ~~~~i~ei~G~~-v~~v~l~~~~-~~~~~~~~~gvf~~iG~~p~~~~--~~~~~~-~~~~g~I~v~~~~~TsvpGifAaG 272 (305)
T COG0492 198 TNTVVKEILGDD-VEGVVLKNVK-GEEKELPVDGVFIAIGHLPNTEL--LKGLGV-LDENGYIVVDEEMETSVPGIFAAG 272 (305)
T ss_pred eCCceeEEecCc-cceEEEEecC-CceEEEEeceEEEecCCCCchHH--Hhhccc-cCCCCcEEcCCCcccCCCCEEEeE
Confidence 999999998766 2245555433 45678999999999999999986 455555 788999999999999999999999
Q ss_pred CCCCCCC-cHhHHHHHHHHHHHHHcC
Q 010573 354 DVIPGPM-LAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 354 D~a~~~~-~~~~A~~~g~~aa~~i~~ 378 (507)
|++..+. +...|..+|-.||.++..
T Consensus 273 Dv~~~~~rqi~ta~~~G~~Aa~~a~~ 298 (305)
T COG0492 273 DVADKNGRQIATAAGDGAIAALSAER 298 (305)
T ss_pred eeccCcccEEeehhhhHHHHHHHHHH
Confidence 9997654 688899999999988753
No 51
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=100.00 E-value=3.7e-35 Score=297.09 Aligned_cols=280 Identities=26% Similarity=0.301 Sum_probs=205.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...++|+||||||||++||..|++.|++|+|||+++.+||.+.+ + +|... .+
T Consensus 131 ~~~~~V~IIG~G~aGl~aA~~l~~~G~~V~vie~~~~~GG~l~~-g-ip~~~--------------------------~~ 182 (449)
T TIGR01316 131 STHKKVAVIGAGPAGLACASELAKAGHSVTVFEALHKPGGVVTY-G-IPEFR--------------------------LP 182 (449)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCcEeee-c-CCCcc--------------------------CC
Confidence 45689999999999999999999999999999998889987532 1 22100 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCC-CCC--CCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGS-DVK--SLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~-~p~--~~pg~~~~ 197 (507)
. .+.....+.+++.+++++.+.... ..+.+.+. ...||+||||||+ .|. .+||.+
T Consensus 183 -~-----------~~~~~~~~~l~~~gv~~~~~~~v~-----~~v~~~~~---~~~yd~viiAtGa~~p~~~~ipG~~-- 240 (449)
T TIGR01316 183 -K-----------EIVVTEIKTLKKLGVTFRMNFLVG-----KTATLEEL---FSQYDAVFIGTGAGLPKLMNIPGEE-- 240 (449)
T ss_pred -H-----------HHHHHHHHHHHhCCcEEEeCCccC-----CcCCHHHH---HhhCCEEEEeCCCCCCCcCCCCCCC--
Confidence 0 011111234566789988876321 12333322 2469999999998 564 345543
Q ss_pred CceEecchhhccc---------------cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCCCHHHHHHH
Q 010573 198 EKRIVSSTGALAL---------------NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQF 261 (507)
Q Consensus 198 ~~~~~~~~~~~~~---------------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~d~~~~~~~ 261 (507)
...+++..+++.. ...+++++|||+|.+|+|+|..+.++|.+||++++.++. ++.. ...
T Consensus 241 ~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~l~~~G~~Vtlv~~~~~~~~~~~-----~~~ 315 (449)
T TIGR01316 241 LCGVYSANDFLTRANLMKAYEFPHADTPVYAGKSVVVIGGGNTAVDSARTALRLGAEVHCLYRRTREDMTAR-----VEE 315 (449)
T ss_pred CCCcEEHHHHHHHHhhcccccccccCCcccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeecCcccCCCC-----HHH
Confidence 3345555544311 124689999999999999999999999999999987653 2221 222
Q ss_pred HHHHHhcCcEEEcCceEEEEEEcC-CeE-EEEEeec------C---------CCceEEEEcCEEEEeecCCCCCCCCCCc
Q 010573 262 QRSLEKQKMKFMLKTKVVGVDLSG-DGV-KLTLEPA------A---------GGEKTILEADVVLVSAGRTPFTAGLGLD 324 (507)
Q Consensus 262 ~~~l~~~Gv~i~~~~~v~~i~~~~-~~v-~v~~~~~------~---------~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 324 (507)
.+.+++.||++++++.++++..++ +.+ .+++... . .++..++++|.||+|+|..|++.+ ++
T Consensus 316 ~~~l~~~GV~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~D~Vi~AiG~~p~~~~--l~ 393 (449)
T TIGR01316 316 IAHAEEEGVKFHFLCQPVEIIGDEEGNVRAVKFRKMDCQEQIDSGERRFLPCGDAECKLEADAVIVAIGNGSNPIM--AE 393 (449)
T ss_pred HHHHHhCCCEEEeccCcEEEEEcCCCeEEEEEEEEEEecCcCCCCCeeeeecCCceEEEECCEEEECCCCCCCchh--hh
Confidence 355778999999999999997643 334 2444310 1 123457999999999999999875 56
Q ss_pred ccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 325 KIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 325 ~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
..+++++++|+|.||++++|++|+|||+|||+.++.++..|+.+|+.||.+|.
T Consensus 394 ~~gl~~~~~G~i~vd~~~~Ts~~~VfA~GD~~~g~~~v~~Ai~~G~~AA~~I~ 446 (449)
T TIGR01316 394 TTRLKTSERGTIVVDEDQRTSIPGVFAGGDIILGAATVIRAMGQGKRAAKSIN 446 (449)
T ss_pred ccCcccCCCCeEEeCCCCccCCCCEEEecCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 77899988899999999999999999999999888899999999999999985
No 52
>PRK12831 putative oxidoreductase; Provisional
Probab=100.00 E-value=5.5e-35 Score=296.20 Aligned_cols=285 Identities=25% Similarity=0.282 Sum_probs=205.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
....+||+||||||||++||..|++.|++|+|+|+.+.+||.+.+ .+|...+
T Consensus 137 ~~~~~~V~IIG~GpAGl~aA~~l~~~G~~V~v~e~~~~~GG~l~~--gip~~~l-------------------------- 188 (464)
T PRK12831 137 EKKGKKVAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGVLVY--GIPEFRL-------------------------- 188 (464)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEecCCCCCCeeee--cCCCccC--------------------------
Confidence 345689999999999999999999999999999998889997642 1221100
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCC-CCC--CCCCCcc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGS-DVK--SLPGITI 196 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~-~p~--~~pg~~~ 196 (507)
+.. .+.....+++++.+++++.+.... . .+...+. ...+.||+||||||+ .|+ .+||.+
T Consensus 189 ~~~-----------~~~~~~~~~~~~~gv~i~~~~~v~---~--~v~~~~~-~~~~~~d~viiAtGa~~~~~l~ipG~~- 250 (464)
T PRK12831 189 PKE-----------TVVKKEIENIKKLGVKIETNVVVG---K--TVTIDEL-LEEEGFDAVFIGSGAGLPKFMGIPGEN- 250 (464)
T ss_pred Ccc-----------HHHHHHHHHHHHcCCEEEcCCEEC---C--cCCHHHH-HhccCCCEEEEeCCCCCCCCCCCCCcC-
Confidence 000 011112345667789988776331 1 1222221 123569999999998 464 345543
Q ss_pred CCceEecchhhccc--------------cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCCCHHHHHHH
Q 010573 197 DEKRIVSSTGALAL--------------NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQF 261 (507)
Q Consensus 197 ~~~~~~~~~~~~~~--------------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~d~~~~~~~ 261 (507)
...+++..+++.. ...+++|+|||+|.+|+|+|..+.++|.+|+++.+.+.. ++....+ +
T Consensus 251 -~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~va~d~A~~l~r~Ga~Vtlv~r~~~~~m~a~~~e----~ 325 (464)
T PRK12831 251 -LNGVFSANEFLTRVNLMKAYKPEYDTPIKVGKKVAVVGGGNVAMDAARTALRLGAEVHIVYRRSEEELPARVEE----V 325 (464)
T ss_pred -CcCcEEHHHHHHHHHhcccccccccCcccCCCeEEEECCcHHHHHHHHHHHHcCCEEEEEeecCcccCCCCHHH----H
Confidence 3456666655422 135799999999999999999999999999999987642 3332222 1
Q ss_pred HHHHHhcCcEEEcCceEEEEEEcCC-eEE-EEEeec------C---------CCceEEEEcCEEEEeecCCCCCCCCCCc
Q 010573 262 QRSLEKQKMKFMLKTKVVGVDLSGD-GVK-LTLEPA------A---------GGEKTILEADVVLVSAGRTPFTAGLGLD 324 (507)
Q Consensus 262 ~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~-v~~~~~------~---------~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 324 (507)
+.+++.||++++++.++++..+++ .+. +.+... . +++..++++|.||+|+|..|++.+ ++
T Consensus 326 -~~a~~eGV~i~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~d~~Gr~~~~~~~g~~~~i~~D~Vi~AiG~~p~~~~--~~ 402 (464)
T PRK12831 326 -HHAKEEGVIFDLLTNPVEILGDENGWVKGMKCIKMELGEPDASGRRRPVEIEGSEFVLEVDTVIMSLGTSPNPLI--SS 402 (464)
T ss_pred -HHHHHcCCEEEecccceEEEecCCCeEEEEEEEEEEecCcCCCCCccceecCCceEEEECCEEEECCCCCCChhh--hc
Confidence 235678999999999999976433 332 333210 0 233457999999999999999875 34
Q ss_pred c-cCceecCCCCeecCCC-CCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 325 K-IGVETDKMGRIPVNER-FATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 325 ~-~gl~~~~~G~i~Vd~~-~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
. .|++++++|.|.||++ ++||.|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 403 ~~~gl~~~~~G~i~vd~~~~~Ts~pgVfAaGD~~~g~~~v~~Ai~~G~~AA~~I~~ 458 (464)
T PRK12831 403 TTKGLKINKRGCIVADEETGLTSKEGVFAGGDAVTGAATVILAMGAGKKAAKAIDE 458 (464)
T ss_pred ccCCceECCCCcEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 3 6888888899999998 9999999999999999888899999999999999853
No 53
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=100.00 E-value=1.4e-34 Score=287.38 Aligned_cols=281 Identities=21% Similarity=0.272 Sum_probs=208.5
Q ss_pred cEEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 45 DVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+|||||||+||+.+|.+|+++ +.+|+|||+++..- +..+.|. +...... .
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~~~~----~~~~~~~----------------~~~g~~~-------~ 53 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTP----YSGMLPG----------------MIAGHYS-------L 53 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCCCCc----ccchhhH----------------HHheeCC-------H
Confidence 589999999999999999754 68999999965321 0001110 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCccCCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDEK 199 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~~~~ 199 (507)
+++.....+++++.+++++.+.+..+|.+...|.+.+| +++.||+||||||+.|. .+||......
T Consensus 54 -----------~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g--~~~~yD~LviAtG~~~~~~~i~g~~~~~~ 120 (364)
T TIGR03169 54 -----------DEIRIDLRRLARQAGARFVIAEATGIDPDRRKVLLANR--PPLSYDVLSLDVGSTTPLSGVEGAADLAV 120 (364)
T ss_pred -----------HHhcccHHHHHHhcCCEEEEEEEEEEecccCEEEECCC--CcccccEEEEccCCCCCCCCCCccccccc
Confidence 11222234566778999999999999988888888887 67999999999999984 4555321111
Q ss_pred eEecchhhcc--------c--cCCCCeEEEEcCcHHHHHHHHHHHh----cC--CeeEEEcccCccCCCCCHHHHHHHHH
Q 010573 200 RIVSSTGALA--------L--NEVPKKLVVIGAGYIGLEMGSVWAR----LG--SEVTVVEFAADIVPSMDGEIRKQFQR 263 (507)
Q Consensus 200 ~~~~~~~~~~--------~--~~~~~~vvVvG~G~~g~e~A~~l~~----~g--~~Vtlv~~~~~~~~~~d~~~~~~~~~ 263 (507)
.+.+.+++.. . ...+++++|+|+|++|+|+|..|.+ .| .+|+++ ..+.+++.+++++...+++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~E~A~~l~~~~~~~g~~~~V~li-~~~~~l~~~~~~~~~~~~~ 199 (364)
T TIGR03169 121 PVKPIENFLARWEALLESADAPPGTKRLAVVGGGAAGVEIALALRRRLPKRGLRGQVTLI-AGASLLPGFPAKVRRLVLR 199 (364)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHHHHHHhcCCCceEEEE-eCCcccccCCHHHHHHHHH
Confidence 1222222211 1 1235799999999999999999875 34 589999 6677788889999999999
Q ss_pred HHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCC
Q 010573 264 SLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA 343 (507)
Q Consensus 264 ~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~ 343 (507)
.+++.||++++++.+++++. + .+.+. +++++++|.+++|+|.+|+.. +...++.++++|+|.||+++|
T Consensus 200 ~l~~~gV~v~~~~~v~~i~~--~--~v~~~-----~g~~i~~D~vi~a~G~~p~~~---l~~~gl~~~~~g~i~vd~~l~ 267 (364)
T TIGR03169 200 LLARRGIEVHEGAPVTRGPD--G--ALILA-----DGRTLPADAILWATGARAPPW---LAESGLPLDEDGFLRVDPTLQ 267 (364)
T ss_pred HHHHCCCEEEeCCeeEEEcC--C--eEEeC-----CCCEEecCEEEEccCCChhhH---HHHcCCCcCCCCeEEECCccc
Confidence 99999999999999998853 3 34443 456899999999999999864 455678888889999999999
Q ss_pred C-CCCCeEEecCCCCC-----CCcHhHHHHHHHHHHHHHcC
Q 010573 344 T-NIPGVYAIGDVIPG-----PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 344 t-~~~~IyA~GD~a~~-----~~~~~~A~~~g~~aa~~i~~ 378 (507)
| +.|+|||+|||+.. +..+..|.+||+.+|+||..
T Consensus 268 ~~~~~~Iya~GD~~~~~~~~~~~~~~~A~~~g~~~a~ni~~ 308 (364)
T TIGR03169 268 SLSHPHVFAAGDCAVITDAPRPKAGVYAVRQAPILAANLRA 308 (364)
T ss_pred cCCCCCEEEeeeeeecCCCCCCCchHHHHHhHHHHHHHHHH
Confidence 7 99999999999943 34678899999999999963
No 54
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=100.00 E-value=6.1e-34 Score=301.84 Aligned_cols=283 Identities=24% Similarity=0.308 Sum_probs=205.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.+..+|+||||||||++||..|++.|++|+|+|+.+.+||.+.+ .+|...+..
T Consensus 537 ~tgKkVaIIGgGPAGLsAA~~Lar~G~~VtV~Ek~~~~GG~lr~--~IP~~Rlp~------------------------- 589 (1019)
T PRK09853 537 GSRKKVAVIGAGPAGLAAAYFLARAGHPVTVFEREENAGGVVKN--IIPQFRIPA------------------------- 589 (1019)
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCeEEEEecccccCcceee--ecccccccH-------------------------
Confidence 35679999999999999999999999999999999899997643 234321100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCce
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~ 200 (507)
. +.....+++.+.++++..+.... +..++. ....||+||||||++++..+++......
T Consensus 590 --e-----------vL~~die~l~~~GVe~~~gt~Vd-------i~le~L--~~~gYDaVILATGA~~~~~l~IpG~~~g 647 (1019)
T PRK09853 590 --E-----------LIQHDIEFVKAHGVKFEFGCSPD-------LTVEQL--KNEGYDYVVVAIGADKNGGLKLEGGNQN 647 (1019)
T ss_pred --H-----------HHHHHHHHHHHcCCEEEeCceeE-------EEhhhh--eeccCCEEEECcCCCCCCCCCCCCccCC
Confidence 0 00111245566789988875431 222222 4556999999999986432222211234
Q ss_pred Eecchhhccc-------cCCCCeEEEEcCcHHHHHHHHHHHhc-C-CeeEEEcccCc-cCCCCCHHHHHHHHHHHHhcCc
Q 010573 201 IVSSTGALAL-------NEVPKKLVVIGAGYIGLEMGSVWARL-G-SEVTVVEFAAD-IVPSMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 201 ~~~~~~~~~~-------~~~~~~vvVvG~G~~g~e~A~~l~~~-g-~~Vtlv~~~~~-~~~~~d~~~~~~~~~~l~~~Gv 270 (507)
+++..+++.. ...+++|+|||+|.+|+|+|..+.+. | .+|+++.|++. .++..++++. +.+ +.||
T Consensus 648 V~saldfL~~~k~~~~~~~~GKrVVVIGGGnVAmD~Ar~a~RlgGakeVTLVyRr~~~~MPA~~eEle----~Al-eeGV 722 (1019)
T PRK09853 648 VIKALPFLEEYKNKGTALKLGKHVVVVGGGNTAMDAARAALRVPGVEKVTVVYRRTKQEMPAWREEYE----EAL-EDGV 722 (1019)
T ss_pred ceehHHHHHHHhhhcccccCCCEEEEECCChHHHHHHHHHHhcCCCceEEEEEccCcccccccHHHHH----HHH-HcCC
Confidence 5554443321 23589999999999999999999888 4 48999998763 4665554443 333 4699
Q ss_pred EEEcCceEEEEEEcCCeEEEEE---e---------ecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeec
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTL---E---------PAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPV 338 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~---~---------~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~V 338 (507)
++++.+.+.++.. ++.+.+.. . ....+++.++++|.||+|+|..|++++ ++..|++++++|++.|
T Consensus 723 e~~~~~~p~~I~~-dG~l~~~~~~lg~~d~~Gr~~~v~tg~~~~I~aD~VIvAIG~~Pntel--le~~GL~ld~~G~I~V 799 (1019)
T PRK09853 723 EFKELLNPESFDA-DGTLTCRVMKLGEPDESGRRRPVETGETVTLEADTVITAIGEQVDTEL--LKANGIPLDKKGWPVV 799 (1019)
T ss_pred EEEeCCceEEEEc-CCcEEEEEEEeecccCCCceEEeeCCCeEEEEeCEEEECCCCcCChhH--HHhcCccccCCCCEEe
Confidence 9999999998864 33333211 0 011235678999999999999999987 5677888888899999
Q ss_pred CCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC
Q 010573 339 NERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380 (507)
Q Consensus 339 d~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~ 380 (507)
|++++|+.|+|||+|||+.+|..+..|+.+|+.||.+|++..
T Consensus 800 DetlqTs~pgVFAaGD~a~Gp~tvv~Ai~qGr~AA~nI~~~~ 841 (1019)
T PRK09853 800 DANGETSLTNVYMIGDVQRGPSTIVAAIADARRAADAILSRE 841 (1019)
T ss_pred CCCcccCCCCEEEEeccccCchHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999888899999999999999998643
No 55
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only]
Probab=100.00 E-value=1.9e-33 Score=268.00 Aligned_cols=367 Identities=24% Similarity=0.333 Sum_probs=261.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...++|||+|++|..|+.++++.+. +++|+-++..+ |...
T Consensus 74 ar~fvivGgG~~g~vaie~~r~~g~~~ri~l~~~~~~~----------pydr---------------------------- 115 (478)
T KOG1336|consen 74 ARHFVIVGGGPGGAVAIETLRQVGFTERIALVKREYLL----------PYDR---------------------------- 115 (478)
T ss_pred cceEEEEcCCchhhhhHhhHHhhCCCcceEEEeccccC----------cccc----------------------------
Confidence 5689999999999999999999974 68888653221 1110
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~~ 197 (507)
.++..........+.....+++++.+|+++.+. ++.+|-...++.+.+| +.+.|++++||||+.|. ++||..
T Consensus 116 -~~Ls~~~~~~~~~~a~r~~e~Yke~gIe~~~~t~v~~~D~~~K~l~~~~G--e~~kys~LilATGs~~~~l~~pG~~-- 190 (478)
T KOG1336|consen 116 -ARLSKFLLTVGEGLAKRTPEFYKEKGIELILGTSVVKADLASKTLVLGNG--ETLKYSKLIIATGSSAKTLDIPGVE-- 190 (478)
T ss_pred -hhcccceeeccccccccChhhHhhcCceEEEcceeEEeeccccEEEeCCC--ceeecceEEEeecCccccCCCCCcc--
Confidence 000000000111222233568999999999884 7888999999999888 89999999999999774 556655
Q ss_pred CceEecchhhccc------cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCc
Q 010573 198 EKRIVSSTGALAL------NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 198 ~~~~~~~~~~~~~------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv 270 (507)
...+.+..+..+. ......++++|+|++|+|+|..+...+.+||++++.+.+++ .+.+.+.+.+++.++++||
T Consensus 191 ~~nv~~ireieda~~l~~~~~~~~~vV~vG~G~ig~Evaa~l~~~~~~VT~V~~e~~~~~~lf~~~i~~~~~~y~e~kgV 270 (478)
T KOG1336|consen 191 LKNVFYLREIEDANRLVAAIQLGGKVVCVGGGFIGMEVAAALVSKAKSVTVVFPEPWLLPRLFGPSIGQFYEDYYENKGV 270 (478)
T ss_pred ccceeeeccHHHHHHHHHHhccCceEEEECchHHHHHHHHHHHhcCceEEEEccCccchhhhhhHHHHHHHHHHHHhcCe
Confidence 4445544433322 13377899999999999999999999999999999999887 7789999999999999999
Q ss_pred EEEcCceEEEEEEcCCe--EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCC
Q 010573 271 KFMLKTKVVGVDLSGDG--VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~--v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~ 348 (507)
++++++.+.+++.+.++ +.|.+. +++++++|+|++++|.+|++.++ +. +..+++.|+|.||+.+||++||
T Consensus 271 k~~~~t~~s~l~~~~~Gev~~V~l~-----dg~~l~adlvv~GiG~~p~t~~~--~~-g~~~~~~G~i~V~~~f~t~~~~ 342 (478)
T KOG1336|consen 271 KFYLGTVVSSLEGNSDGEVSEVKLK-----DGKTLEADLVVVGIGIKPNTSFL--EK-GILLDSKGGIKVDEFFQTSVPN 342 (478)
T ss_pred EEEEecceeecccCCCCcEEEEEec-----cCCEeccCeEEEeeccccccccc--cc-cceecccCCEeehhceeeccCC
Confidence 99999999999876633 345555 67899999999999999999984 44 7888999999999999999999
Q ss_pred eEEecCCCCCCC----------cHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEE
Q 010573 349 VYAIGDVIPGPM----------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVG 418 (507)
Q Consensus 349 IyA~GD~a~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 418 (507)
|||+||++..|. .+..|..+|+.|+..+...... .++.+|.+.-...+.+ .+..|..+ +
T Consensus 343 VyAiGDva~fp~~~~~~~~~v~H~~~A~~~g~~av~ai~~~~~~-~~~~lPyf~t~~f~~~--------~~~~G~g~--~ 411 (478)
T KOG1336|consen 343 VYAIGDVATFPLKGYGEDRRVEHVDHARASGRQAVKAIKMAPQD-AYDYLPYFYTRFFSLS--------WRFAGDGV--G 411 (478)
T ss_pred cccccceeecccccccccccchHHHHHHHHHHhhhhhhhccCcc-cccccchHHHHHhhhh--------ccccCcCc--c
Confidence 999999995432 4567888888776666533221 2555664321111111 11111110 0
Q ss_pred EEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhc
Q 010573 419 KFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIAR 481 (507)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 481 (507)
.... ....+...|...++ + +..+|+.+-+- ..+..+.++..++++..+..+..
T Consensus 412 ~~v~------~G~~e~~~f~ay~~--k-~~~v~a~~~~g-~~~~~~~~a~l~~~~~~v~~~~~ 464 (478)
T KOG1336|consen 412 DVVL------FGDLEPGSFGAYWI--K-GDKVGAVAEGG-RDEEVSQFAKLARQGPEVTSLKL 464 (478)
T ss_pred ceee------ecccccccceeeEe--e-ccEEEEEeccC-CChHHHHHHHHHhcCCcchhhhh
Confidence 0000 00112234777777 4 77888765443 45778889999999998877543
No 56
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=100.00 E-value=5.5e-34 Score=290.27 Aligned_cols=283 Identities=25% Similarity=0.306 Sum_probs=205.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
....++|+||||||||+++|..|++.|++|+|+|+.+.+||...+ .+|...+
T Consensus 137 ~~~~~~VvIIGgGpaGl~aA~~l~~~g~~V~lie~~~~~gG~l~~--gip~~~~-------------------------- 188 (457)
T PRK11749 137 PKTGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLLRY--GIPEFRL-------------------------- 188 (457)
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCCCCcEeec--cCCCccC--------------------------
Confidence 345689999999999999999999999999999998888886432 1121100
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CC--CCCCCcc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLPGITI 196 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~~pg~~~ 196 (507)
. ..+.....+++++.+++++.+.... . .+.+.+. .+.||+||+|||+. |. .+||..
T Consensus 189 ~------------~~~~~~~~~~l~~~gv~~~~~~~v~---~--~v~~~~~---~~~~d~vvlAtGa~~~~~~~i~G~~- 247 (457)
T PRK11749 189 P------------KDIVDREVERLLKLGVEIRTNTEVG---R--DITLDEL---RAGYDAVFIGTGAGLPRFLGIPGEN- 247 (457)
T ss_pred C------------HHHHHHHHHHHHHcCCEEEeCCEEC---C--ccCHHHH---HhhCCEEEEccCCCCCCCCCCCCcc-
Confidence 0 0111222345666789988776431 1 1222222 26899999999986 43 344443
Q ss_pred CCceEecchhhcccc---------CCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCcc-CCCCCHHHHHHHHHHH
Q 010573 197 DEKRIVSSTGALALN---------EVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI-VPSMDGEIRKQFQRSL 265 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~---------~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~-~~~~d~~~~~~~~~~l 265 (507)
...+++..+++... ..+++|+|||+|.+|+|+|..+.+.|. +|+++++.+.. ++..+. ..+.+
T Consensus 248 -~~gv~~~~~~l~~~~~~~~~~~~~~g~~VvViGgG~~g~e~A~~l~~~G~~~Vtlv~~~~~~~~~~~~~-----~~~~~ 321 (457)
T PRK11749 248 -LGGVYSAVDFLTRVNQAVADYDLPVGKRVVVIGGGNTAMDAARTAKRLGAESVTIVYRRGREEMPASEE-----EVEHA 321 (457)
T ss_pred -CCCcEEHHHHHHHHhhccccccCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEeeecCcccCCCCHH-----HHHHH
Confidence 33455544432211 247999999999999999999999998 89999987653 443322 24567
Q ss_pred HhcCcEEEcCceEEEEEEcCCeE-EEEEeec--------------CCCceEEEEcCEEEEeecCCCCCCCCCCcccCcee
Q 010573 266 EKQKMKFMLKTKVVGVDLSGDGV-KLTLEPA--------------AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVET 330 (507)
Q Consensus 266 ~~~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~--------------~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~ 330 (507)
++.||++++++.++++..+++++ .+++... .++++.++++|.||+++|.+|+..++ .+..++.+
T Consensus 322 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~a~G~~p~~~l~-~~~~gl~~ 400 (457)
T PRK11749 322 KEEGVEFEWLAAPVEILGDEGRVTGVEFVRMELGEPDASGRRRVPIEGSEFTLPADLVIKAIGQTPNPLIL-STTPGLEL 400 (457)
T ss_pred HHCCCEEEecCCcEEEEecCCceEEEEEEEEEecCcCCCCCcccCCCCceEEEECCEEEECccCCCCchhh-ccccCccC
Confidence 78999999999999998765442 2333211 12355689999999999999997653 34567888
Q ss_pred cCCCCeecCC-CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 331 DKMGRIPVNE-RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 331 ~~~G~i~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+++|+|+||+ +++|+.|+|||+|||+.++.++..|+.||+.||.+|..
T Consensus 401 ~~~g~i~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~I~~ 449 (457)
T PRK11749 401 NRWGTIIADDETGRTSLPGVFAGGDIVTGAATVVWAVGDGKDAAEAIHE 449 (457)
T ss_pred CCCCCEEeCCCCCccCCCCEEEeCCcCCCchHHHHHHHHHHHHHHHHHH
Confidence 8889999998 78999999999999998878899999999999999863
No 57
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=100.00 E-value=2.7e-33 Score=298.57 Aligned_cols=281 Identities=27% Similarity=0.338 Sum_probs=203.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...++|+||||||||++||..|++.|++|+|+|+++.+||.+.+. +|...+..
T Consensus 535 ~~~kkVaIIGGGPAGLSAA~~LAr~G~~VTV~Ek~~~lGG~l~~~--IP~~rlp~------------------------- 587 (1012)
T TIGR03315 535 SSAHKVAVIGAGPAGLSAGYFLARAGHPVTVFEKKEKPGGVVKNI--IPEFRISA------------------------- 587 (1012)
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEecccccCceeeec--ccccCCCH-------------------------
Confidence 345899999999999999999999999999999999999986432 33221100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCce
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~ 200 (507)
. ......+++...+|++..+... .. ...+. ....||+||||||+.++..+++......
T Consensus 588 --e-----------~l~~~ie~l~~~GVe~~~g~~~-----d~--~ve~l--~~~gYDaVIIATGA~~~~~l~I~G~~~~ 645 (1012)
T TIGR03315 588 --E-----------SIQKDIELVKFHGVEFKYGCSP-----DL--TVAEL--KNQGYKYVILAIGAWKHGPLRLEGGGER 645 (1012)
T ss_pred --H-----------HHHHHHHHHHhcCcEEEEeccc-----ce--Ehhhh--hcccccEEEECCCCCCCCCCCcCCCCcc
Confidence 0 0011124455678988877321 11 11221 3456999999999986433222222234
Q ss_pred Eecchhhcc-------ccCCCCeEEEEcCcHHHHHHHHHHHhc-CC-eeEEEcccCc-cCCCCCHHHHHHHHHHHHhcCc
Q 010573 201 IVSSTGALA-------LNEVPKKLVVIGAGYIGLEMGSVWARL-GS-EVTVVEFAAD-IVPSMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 201 ~~~~~~~~~-------~~~~~~~vvVvG~G~~g~e~A~~l~~~-g~-~Vtlv~~~~~-~~~~~d~~~~~~~~~~l~~~Gv 270 (507)
+++..+++. ....+++|+|||+|.+|+|+|..+.+. |. +|+++++++. .++..++++. +.+ +.||
T Consensus 646 v~~avefL~~~~~~~~~~~~GK~VVVIGGGnvAmD~Ar~a~Rl~Ga~kVtLVyRr~~~~Mpa~~eEl~----~al-eeGV 720 (1012)
T TIGR03315 646 VLKSLEFLRAFKEGPTINPLGKHVVVVGGGNTAMDAARAALRVPGVEKVTVVYRRTKRYMPASREELE----EAL-EDGV 720 (1012)
T ss_pred eeeHHHHHHHhhccccccccCCeEEEECCCHHHHHHHHHHHHhCCCceEEEEEccCccccccCHHHHH----HHH-HcCC
Confidence 554444332 124589999999999999999999887 75 7999998763 4555554433 333 4799
Q ss_pred EEEcCceEEEEEEcCCeEEEEEe------------ecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeec
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLE------------PAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPV 338 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~------------~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~V 338 (507)
++++...+.+++ ++.+.+... ...+++..++++|.||+|+|..|++.+ ++..|++++++|++.|
T Consensus 721 e~~~~~~p~~I~--~g~l~v~~~~l~~~d~sGr~~~v~~Gee~~I~aD~VIvAiG~~Pnt~l--le~~GL~ld~~G~I~V 796 (1012)
T TIGR03315 721 DFKELLSPESFE--DGTLTCEVMKLGEPDASGRRRPVGTGETVDLPADTVIAAVGEQVDTDL--LQKNGIPLDEYGWPVV 796 (1012)
T ss_pred EEEeCCceEEEE--CCeEEEEEEEeecccCCCceeeecCCCeEEEEeCEEEEecCCcCChHH--HHhcCcccCCCCCEEe
Confidence 999999888886 344433211 011345568999999999999999987 5677899888899999
Q ss_pred CCC-CCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCC
Q 010573 339 NER-FATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 339 d~~-~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
|++ ++|+.|+|||+|||+.+|..+..|+.+|+.||.+|++.
T Consensus 797 D~~~~~Ts~pgVFAaGD~a~GP~tVv~AIaqGr~AA~nIl~~ 838 (1012)
T TIGR03315 797 NQATGETNITNVFVIGDANRGPATIVEAIADGRKAANAILSR 838 (1012)
T ss_pred CCCCCccCCCCEEEEeCcCCCccHHHHHHHHHHHHHHHHhcc
Confidence 987 89999999999999988989999999999999999864
No 58
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=100.00 E-value=1.9e-32 Score=269.84 Aligned_cols=290 Identities=26% Similarity=0.329 Sum_probs=200.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
....+|+|||+|++|+++|..|++.|++|++||+.+.+||..... ++.. ..+
T Consensus 16 ~~~~~VvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~--------------------------~~~ 67 (352)
T PRK12770 16 PTGKKVAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFG--IPEF--------------------------RIP 67 (352)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeeec--Cccc--------------------------ccC
Confidence 345799999999999999999999999999999988888754211 0100 000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEec-C------CEEEEEccCCceEEEEeCeEEEccCCC-CC--C
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS-P------SEVSVDTIEGGNTVVKGKNIIIATGSD-VK--S 190 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~------~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~ 190 (507)
.. .+....+ .+.+.++++..++....+ . ..........+...+.||+||||||+. |. .
T Consensus 68 ~~-----------~~~~~~~-~l~~~~i~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lviAtGs~~~~~~~ 135 (352)
T PRK12770 68 IE-----------RVREGVK-ELEEAGVVFHTRTKVCCGEPLHEEEGDEFVERIVSLEELVKKYDAVLIATGTWKSRKLG 135 (352)
T ss_pred HH-----------HHHHHHH-HHHhCCeEEecCcEEeeccccccccccccccccCCHHHHHhhCCEEEEEeCCCCCCcCC
Confidence 00 0111112 233448888777543221 1 111111111111247899999999994 43 3
Q ss_pred CCCCccCCceEecchhhc-----------ccc----CCCCeEEEEcCcHHHHHHHHHHHhcCCe-eEEEcccCccCCCCC
Q 010573 191 LPGITIDEKRIVSSTGAL-----------ALN----EVPKKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAADIVPSMD 254 (507)
Q Consensus 191 ~pg~~~~~~~~~~~~~~~-----------~~~----~~~~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~~~~~d 254 (507)
+|+.. ...+++..+.. ... ..+++++|||+|++|+|+|..|.+.|.+ |+++++.+......
T Consensus 136 ipg~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vvViG~G~~g~e~A~~l~~~g~~~Vtvi~~~~~~~~~~- 212 (352)
T PRK12770 136 IPGED--LPGVYSALEYLFRIRAAKLGYLPWEKVPPVEGKKVVVVGAGLTAVDAALEAVLLGAEKVYLAYRRTINEAPA- 212 (352)
T ss_pred CCCcc--ccCceeHHHHHHHhhhccccccccccccccCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeecchhhCCC-
Confidence 45433 33444443221 011 1258999999999999999999999987 99998765432211
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeec---------------CCCceEEEEcCEEEEeecCCCCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPA---------------AGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~---------------~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.....+.|+++||++++++.+.+++.++....+++... .++++.++++|.|++++|++|++.
T Consensus 213 ---~~~~~~~l~~~gi~i~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 289 (352)
T PRK12770 213 ---GKYEIERLIARGVEFLELVTPVRIIGEGRVEGVELAKMRLGEPDESGRPRPVPIPGSEFVLEADTVVFAIGEIPTPP 289 (352)
T ss_pred ---CHHHHHHHHHcCCEEeeccCceeeecCCcEeEEEEEEEEecCcCcccCcCceecCCCeEEEECCEEEECcccCCCch
Confidence 13344568899999999999999976543333444321 134557899999999999999987
Q ss_pred CCCCcc-cCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 320 GLGLDK-IGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 320 ~l~~~~-~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+ ... .|++++++|+|.||++++|+.|+|||+|||+..+.....|+.+|+.||.+|..
T Consensus 290 l--~~~~~g~~~~~~g~i~vd~~~~t~~~~vyaiGD~~~~~~~~~~A~~~g~~aa~~i~~ 347 (352)
T PRK12770 290 F--AKECLGIELNRKGEIVVDEKHMTSREGVFAAGDVVTGPSKIGKAIKSGLRAAQSIHE 347 (352)
T ss_pred h--hhcccCceecCCCcEeeCCCcccCCCCEEEEcccccCcchHHHHHHHHHHHHHHHHH
Confidence 5 333 78888888999999999999999999999998888999999999999999853
No 59
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=100.00 E-value=1.7e-32 Score=295.99 Aligned_cols=281 Identities=24% Similarity=0.274 Sum_probs=204.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+.++|+|||||||||+||.+|++.|++|+|+|+.+.+||...+ .+|...+..
T Consensus 305 ~gkkVaVIGsGPAGLsaA~~Lar~G~~VtVfE~~~~~GG~l~y--GIP~~rlp~-------------------------- 356 (944)
T PRK12779 305 VKPPIAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGGVLRY--GIPEFRLPN-------------------------- 356 (944)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCCCCceEEc--cCCCCcChH--------------------------
Confidence 4689999999999999999999999999999999999997432 244321110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CC--CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~~pg~~~~~ 198 (507)
.+.+...+.++..|+++..+.... ..+.+++. ....||+|+||||+. |+ .+||.+ .
T Consensus 357 ------------~vi~~~i~~l~~~Gv~f~~n~~vG-----~dit~~~l--~~~~yDAV~LAtGA~~pr~l~IpG~d--l 415 (944)
T PRK12779 357 ------------QLIDDVVEKIKLLGGRFVKNFVVG-----KTATLEDL--KAAGFWKIFVGTGAGLPTFMNVPGEH--L 415 (944)
T ss_pred ------------HHHHHHHHHHHhhcCeEEEeEEec-----cEEeHHHh--ccccCCEEEEeCCCCCCCcCCCCCCc--C
Confidence 011111244566789988775432 22444443 445799999999995 54 445533 4
Q ss_pred ceEecchhhccc----------------cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc-cCCCCCHHHHHHH
Q 010573 199 KRIVSSTGALAL----------------NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-IVPSMDGEIRKQF 261 (507)
Q Consensus 199 ~~~~~~~~~~~~----------------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~~d~~~~~~~ 261 (507)
..+++..+++.. ...+++|+|||||.+|+|+|..+.+.|++|+++.+++. .+|....+ +
T Consensus 416 ~GV~~a~dfL~~~~~~~~~~~~~~~~~~~~~Gk~VvVIGGG~tA~D~A~ta~R~Ga~Vtlv~rr~~~~mpa~~~e----~ 491 (944)
T PRK12779 416 LGVMSANEFLTRVNLMRGLDDDYETPLPEVKGKEVFVIGGGNTAMDAARTAKRLGGNVTIVYRRTKSEMPARVEE----L 491 (944)
T ss_pred cCcEEHHHHHHHHHhhccccccccccccccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEecCcccccccHHH----H
Confidence 456666655421 11468999999999999999999999999999988764 24432222 3
Q ss_pred HHHHHhcCcEEEcCceEEEEEEcCC--eEE-EEEee--------------cCCCceEEEEcCEEEEeecCCCCCCCCCCc
Q 010573 262 QRSLEKQKMKFMLKTKVVGVDLSGD--GVK-LTLEP--------------AAGGEKTILEADVVLVSAGRTPFTAGLGLD 324 (507)
Q Consensus 262 ~~~l~~~Gv~i~~~~~v~~i~~~~~--~v~-v~~~~--------------~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 324 (507)
... .+.||++++++.++++..+++ .+. +++.. ..+|+..++++|.||+|+|+.|+.... ..
T Consensus 492 ~~a-~eeGV~~~~~~~p~~i~~d~~~~~V~~v~~~~~~l~~~d~~Gr~~~~~~G~e~~i~aD~VI~AiG~~p~~~l~-~~ 569 (944)
T PRK12779 492 HHA-LEEGINLAVLRAPREFIGDDHTHFVTHALLDVNELGEPDKSGRRSPKPTGEIERVPVDLVIMALGNTANPIMK-DA 569 (944)
T ss_pred HHH-HHCCCEEEeCcceEEEEecCCCCEEEEEEEEEEEeccccCcCceeeecCCceEEEECCEEEEcCCcCCChhhh-hc
Confidence 332 367999999999999976532 232 22210 012344679999999999999997532 34
Q ss_pred ccCceecCCCCeecCC-CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 325 KIGVETDKMGRIPVNE-RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 325 ~~gl~~~~~G~i~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
..+++++++|.|+||+ .++||.|+|||+|||+.++.++..|+.+|+.||.+|.
T Consensus 570 ~~gle~~~~G~I~vd~~~~~Ts~pgVFAaGD~~~G~~~vv~Ai~eGr~AA~~I~ 623 (944)
T PRK12779 570 EPGLKTNKWGTIEVEKGSQRTSIKGVYSGGDAARGGSTAIRAAGDGQAAAKEIV 623 (944)
T ss_pred ccCceECCCCCEEECCCCCccCCCCEEEEEcCCCChHHHHHHHHHHHHHHHHHH
Confidence 4578889899999997 4889999999999999988899999999999999986
No 60
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=100.00 E-value=9.5e-33 Score=296.62 Aligned_cols=283 Identities=26% Similarity=0.337 Sum_probs=204.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...+||+||||||||++||..|++.|++|+|+|+.+.+||...+ .+|...+.
T Consensus 429 ~~~~~V~IIGaGpAGl~aA~~l~~~G~~V~v~e~~~~~GG~l~~--gip~~rlp-------------------------- 480 (752)
T PRK12778 429 KNGKKVAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGGVLKY--GIPEFRLP-------------------------- 480 (752)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeee--cCCCCCCC--------------------------
Confidence 45679999999999999999999999999999998888987432 23321100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CC--CCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~~pg~~~~ 197 (507)
.. +.....+.+++.++++..+.... . .+.+++. ....||+||||||+. |+ .+||..
T Consensus 481 -~~-----------~~~~~~~~l~~~gv~~~~~~~v~---~--~v~~~~l--~~~~ydavvlAtGa~~~~~l~ipG~~-- 539 (752)
T PRK12778 481 -KK-----------IVDVEIENLKKLGVKFETDVIVG---K--TITIEEL--EEEGFKGIFIASGAGLPNFMNIPGEN-- 539 (752)
T ss_pred -HH-----------HHHHHHHHHHHCCCEEECCCEEC---C--cCCHHHH--hhcCCCEEEEeCCCCCCCCCCCCCCC--
Confidence 00 01111234566789988765321 1 2223322 346799999999984 64 345533
Q ss_pred CceEecchhhccc--------------cCCCCeEEEEcCcHHHHHHHHHHHhcCCe-eEEEcccCcc-CCCCCHHHHHHH
Q 010573 198 EKRIVSSTGALAL--------------NEVPKKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAADI-VPSMDGEIRKQF 261 (507)
Q Consensus 198 ~~~~~~~~~~~~~--------------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~-~~~~d~~~~~~~ 261 (507)
...+++..+++.. ...+++|+|||+|.+|+|+|..+.+.|.+ |+++++++.. ++....++
T Consensus 540 ~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtlv~r~~~~~~~~~~~e~---- 615 (752)
T PRK12778 540 SNGVMSSNEYLTRVNLMDAASPDSDTPIKFGKKVAVVGGGNTAMDSARTAKRLGAERVTIVYRRSEEEMPARLEEV---- 615 (752)
T ss_pred CCCcEEHHHHHHHHhhcccccccccCcccCCCcEEEECCcHHHHHHHHHHHHcCCCeEEEeeecCcccCCCCHHHH----
Confidence 3456666554321 12468999999999999999999999997 9999987642 44332222
Q ss_pred HHHHHhcCcEEEcCceEEEEEEcCC-eEE-EEEeec------C---------CCceEEEEcCEEEEeecCCCCCCCCCCc
Q 010573 262 QRSLEKQKMKFMLKTKVVGVDLSGD-GVK-LTLEPA------A---------GGEKTILEADVVLVSAGRTPFTAGLGLD 324 (507)
Q Consensus 262 ~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~-v~~~~~------~---------~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 324 (507)
+.+++.||++++++.+.++..+++ .+. +.+... . +++..++++|.||+|+|..|+..++ ..
T Consensus 616 -~~~~~~GV~i~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~G~~~~~~~~g~~~~i~~D~Vi~A~G~~p~~~l~-~~ 693 (752)
T PRK12778 616 -KHAKEEGIEFLTLHNPIEYLADEKGWVKQVVLQKMELGEPDASGRRRPVAIPGSTFTVDVDLVIVSVGVSPNPLVP-SS 693 (752)
T ss_pred -HHHHHcCCEEEecCcceEEEECCCCEEEEEEEEEEEecCcCCCCCCCceecCCCeEEEECCEEEECcCCCCCcccc-cc
Confidence 346778999999999999876543 332 333210 0 1334579999999999999998653 22
Q ss_pred ccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 325 KIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 325 ~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
..+++++++|.|.||++++|+.|||||+|||+.++.++..|+.+|+.||.+|..
T Consensus 694 ~~gl~~~~~G~i~vd~~~~Ts~~gVfA~GD~~~g~~~vv~Av~~G~~AA~~I~~ 747 (752)
T PRK12778 694 IPGLELNRKGTIVVDEEMQSSIPGIYAGGDIVRGGATVILAMGDGKRAAAAIDE 747 (752)
T ss_pred ccCceECCCCCEEeCCCCCCCCCCEEEeCCccCCcHHHHHHHHHHHHHHHHHHH
Confidence 347888888999999999999999999999998888899999999999999863
No 61
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=100.00 E-value=3.7e-32 Score=277.22 Aligned_cols=287 Identities=23% Similarity=0.310 Sum_probs=200.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...++|+||||||||++||..|++.|++|+|||+.+.+||...+ .+|...+ .
T Consensus 141 ~~~~~VvIIGaGpAGl~aA~~l~~~G~~V~vie~~~~~GG~l~~--gip~~~~--------------------------~ 192 (471)
T PRK12810 141 RTGKKVAVVGSGPAGLAAADQLARAGHKVTVFERADRIGGLLRY--GIPDFKL--------------------------E 192 (471)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCceeee--cCCcccC--------------------------C
Confidence 34579999999999999999999999999999998889886432 2222100 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CC--CCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~~pg~~~~ 197 (507)
.. +.....+++.+.+++++.+.....+ +...+ ....||+||+|||+. |. .+||..
T Consensus 193 -~~-----------~~~~~~~~~~~~gv~~~~~~~v~~~-----~~~~~---~~~~~d~vvlAtGa~~~~~l~ipG~~-- 250 (471)
T PRK12810 193 -KE-----------VIDRRIELMEAEGIEFRTNVEVGKD-----ITAEE---LLAEYDAVFLGTGAYKPRDLGIPGRD-- 250 (471)
T ss_pred -HH-----------HHHHHHHHHHhCCcEEEeCCEECCc-----CCHHH---HHhhCCEEEEecCCCCCCcCCCCCcc--
Confidence 00 1111124566778998877644221 11111 234799999999997 43 355543
Q ss_pred CceEecchhhcc--------------ccCCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCccCCCC-CH----HH
Q 010573 198 EKRIVSSTGALA--------------LNEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADIVPSM-DG----EI 257 (507)
Q Consensus 198 ~~~~~~~~~~~~--------------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~~~~~-d~----~~ 257 (507)
...+++..+++. ....+++|+|||+|++|+|+|..+.+.|. +|++++..+...... +. ..
T Consensus 251 ~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~g~e~A~~~~~~ga~~Vt~~~~~~~~~~~~~~~~~~~~~ 330 (471)
T PRK12810 251 LDGVHFAMDFLIQNTRRVLGDETEPFISAKGKHVVVIGGGDTGMDCVGTAIRQGAKSVTQRDIMPMPPSRRNKNNPWPYW 330 (471)
T ss_pred CCCcEEHHHHHHHHHhhhccccccccccCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEccccCCCccccccccCCccc
Confidence 334444322210 12347999999999999999999999886 788665444221111 00 00
Q ss_pred -HHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeec---------CCCceEEEEcCEEEEeecCCCCCCCCCCccc
Q 010573 258 -RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPA---------AGGEKTILEADVVLVSAGRTPFTAGLGLDKI 326 (507)
Q Consensus 258 -~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~ 326 (507)
.....+.+++.||++++++.++++..+++.+. +++... ..++..++++|.||+|+|.+|+...+ ++..
T Consensus 331 ~~~~~~~~~~~~GV~i~~~~~~~~i~~~~g~v~~V~~~~~~~~~g~~~~~~g~~~~i~~D~VI~A~G~~p~~~~l-~~~~ 409 (471)
T PRK12810 331 PMKLEVSNAHEEGVEREFNVQTKEFEGENGKVTGVKVVRTELGEGDFEPVEGSEFVLPADLVLLAMGFTGPEAGL-LAQF 409 (471)
T ss_pred chHHHHHHHHHcCCeEEeccCceEEEccCCEEEEEEEEEEEecCCCccccCCceEEEECCEEEECcCcCCCchhh-cccc
Confidence 11134556788999999999999976555543 443311 12344689999999999999986533 6777
Q ss_pred CceecCCCCeecC-CCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 327 GVETDKMGRIPVN-ERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 327 gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+++++++|.+++| ++++|+.|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 410 gl~~~~~g~i~vd~~~~~Ts~~gVfa~GD~~~g~~~~~~Av~~G~~AA~~i~~ 462 (471)
T PRK12810 410 GVELDERGRVAAPDNAYQTSNPKVFAAGDMRRGQSLVVWAIAEGRQAARAIDA 462 (471)
T ss_pred CcccCCCCCEEeCCCcccCCCCCEEEccccCCCchhHHHHHHHHHHHHHHHHH
Confidence 8889888999998 789999999999999998888889999999999999863
No 62
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=100.00 E-value=1.5e-31 Score=281.70 Aligned_cols=279 Identities=23% Similarity=0.307 Sum_probs=201.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..++|+||||||||++||..|++.|++|+|+|+++.+||.+.+ .+|...+.
T Consensus 192 ~~k~VaIIGaGpAGl~aA~~La~~G~~Vtv~e~~~~~GG~l~~--gip~~~~~--------------------------- 242 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRY--GIPRFRLP--------------------------- 242 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCceeee--cCCCCCCC---------------------------
Confidence 4579999999999999999999999999999999899997532 12211000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC---CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK---SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~---~~pg~~~~~ 198 (507)
.. +.....+.+.+.++++..+.....+ +...+. ...||+|+||||+.+. .+||.+ .
T Consensus 243 ~~-----------~~~~~~~~l~~~Gv~i~~~~~v~~d-----v~~~~~---~~~~DaVilAtGa~~~~~~~ipG~~--~ 301 (652)
T PRK12814 243 ES-----------VIDADIAPLRAMGAEFRFNTVFGRD-----ITLEEL---QKEFDAVLLAVGAQKASKMGIPGEE--L 301 (652)
T ss_pred HH-----------HHHHHHHHHHHcCCEEEeCCcccCc-----cCHHHH---HhhcCEEEEEcCCCCCCCCCCCCcC--c
Confidence 00 0111123455678888776532111 222221 2359999999999763 345533 3
Q ss_pred ceEecchhhcc------ccCCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCc-cCCCCCHHHHHHHHHHHHhcCc
Q 010573 199 KRIVSSTGALA------LNEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAAD-IVPSMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 199 ~~~~~~~~~~~------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~-~~~~~d~~~~~~~~~~l~~~Gv 270 (507)
..+++..+++. ....+++|+|||+|.+|+|+|..+.+.|. +|+++++.++ .++..+.++ .+. .+.||
T Consensus 302 ~gv~~~~~~l~~~~~~~~~~~gk~VvVIGgG~~a~e~A~~l~~~Ga~~Vtlv~r~~~~~mpa~~~ei----~~a-~~eGV 376 (652)
T PRK12814 302 PGVISGIDFLRNVALGTALHPGKKVVVIGGGNTAIDAARTALRLGAESVTILYRRTREEMPANRAEI----EEA-LAEGV 376 (652)
T ss_pred CCcEeHHHHHHHhhcCCcccCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEeeecCcccCCCCHHHH----HHH-HHcCC
Confidence 34555444432 12358999999999999999999999996 6999998765 355544443 222 35799
Q ss_pred EEEcCceEEEEEEcCCeEEEE---Eeec---C---------CCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCC
Q 010573 271 KFMLKTKVVGVDLSGDGVKLT---LEPA---A---------GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~---~~~~---~---------~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~ 335 (507)
++++++.+.++..+++++.++ +... . +++..++++|.||+++|..|++.+ ++..|++++.+|+
T Consensus 377 ~i~~~~~~~~i~~~~~~~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~~D~VI~AiG~~p~~~l--l~~~gl~~~~~G~ 454 (652)
T PRK12814 377 SLRELAAPVSIERSEGGLELTAIKMQQGEPDESGRRRPVPVEGSEFTLQADTVISAIGQQVDPPI--AEAAGIGTSRNGT 454 (652)
T ss_pred cEEeccCcEEEEecCCeEEEEEEEEEecccCCCCCCcceecCCceEEEECCEEEECCCCcCCccc--ccccCccccCCCc
Confidence 999999999997766654433 2211 0 233457999999999999999986 5667888888899
Q ss_pred eecCC-CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 336 IPVNE-RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 336 i~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
|.||+ +++|+.|||||+||++.++.++..|+.+|+.||.+|.
T Consensus 455 I~vd~~~~~Ts~pgVfA~GDv~~g~~~v~~Ai~~G~~AA~~I~ 497 (652)
T PRK12814 455 VKVDPETLQTSVAGVFAGGDCVTGADIAINAVEQGKRAAHAID 497 (652)
T ss_pred EeeCCCCCcCCCCCEEEcCCcCCCchHHHHHHHHHHHHHHHHH
Confidence 99997 5889999999999999888889999999999999985
No 63
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=99.98 E-value=1.1e-30 Score=276.50 Aligned_cols=281 Identities=21% Similarity=0.326 Sum_probs=199.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..++|+||||||||++||..|++.|++|+|+|+.+.+||...+ .+|...+..
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~--gip~~~l~~-------------------------- 377 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTF--GIPAFKLDK-------------------------- 377 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeee--cCCCccCCH--------------------------
Confidence 4679999999999999999999999999999999999997432 234221100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC---CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK---SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~---~~pg~~~~~ 198 (507)
.+.....+++++.|+++..+.....+ +...+ ....||+|++|||+.+. .+|+...
T Consensus 378 ------------~~~~~~~~~~~~~Gv~~~~~~~v~~~-----i~~~~---~~~~~DavilAtGa~~~~~l~i~g~~~-- 435 (654)
T PRK12769 378 ------------SLLARRREIFSAMGIEFELNCEVGKD-----ISLES---LLEDYDAVFVGVGTYRSMKAGLPNEDA-- 435 (654)
T ss_pred ------------HHHHHHHHHHHHCCeEEECCCEeCCc-----CCHHH---HHhcCCEEEEeCCCCCCCCCCCCCCCC--
Confidence 01111134556678888766432111 11111 12369999999998653 4555433
Q ss_pred ceEecchhh--------cc---------ccCCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCcc-CCCCCHHHHH
Q 010573 199 KRIVSSTGA--------LA---------LNEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI-VPSMDGEIRK 259 (507)
Q Consensus 199 ~~~~~~~~~--------~~---------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~-~~~~d~~~~~ 259 (507)
..+++..++ .. ....+++|+|||+|.+|+|+|..+.+.|. +|+++++++.. ++..+.+
T Consensus 436 ~Gv~~a~~~l~~~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~a~r~ga~~Vt~i~~~~~~~~~~~~~e--- 512 (654)
T PRK12769 436 PGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKE--- 512 (654)
T ss_pred CCeEEhHHHHHHHHhhhccCccccccccccCCCCeEEEECCcHHHHHHHHHHHHcCCCeEEEeEecCCCCCCCCHHH---
Confidence 223322111 11 11246899999999999999999999996 69999887654 5544433
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEEcC-CeE-EEEEeec------C---------CCceEEEEcCEEEEeecCCCCCCCCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDLSG-DGV-KLTLEPA------A---------GGEKTILEADVVLVSAGRTPFTAGLG 322 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v-~v~~~~~------~---------~g~~~~i~~D~vi~a~G~~p~~~~l~ 322 (507)
.+.+++.||++++++.++++..++ +.+ .+++... . .++..++++|.||+|+|+.|+...+
T Consensus 513 --~~~~~~~Gv~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~G~~~~~~~~g~~~~i~~D~Vi~AiG~~p~~~~~- 589 (654)
T PRK12769 513 --VKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPIPGSEFVMPADAVIMAFGFNPHGMPW- 589 (654)
T ss_pred --HHHHHHcCCeEEeccCcEEEEECCCCeEEEEEEEEEEecCcCCCCCCcceeCCCceEEEECCEEEECccCCCCcccc-
Confidence 245678899999999999987543 333 2433210 1 2334579999999999999986433
Q ss_pred CcccCceecCCCCeecCC----CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 323 LDKIGVETDKMGRIPVNE----RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 323 ~~~~gl~~~~~G~i~Vd~----~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
++..+++++++|.|.||+ +++|++|+|||+||++.++.++..|+.+|+.||.+|..
T Consensus 590 ~~~~gl~~~~~G~i~vd~~~~~~~~Ts~~gVfAaGD~~~g~~~vv~Ai~~Gr~AA~~I~~ 649 (654)
T PRK12769 590 LESHGVTVDKWGRIIADVESQYRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIID 649 (654)
T ss_pred ccccCCcCCCCCCEEeCCCcccCcccCCCCEEEcCCcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 567789999999999986 48999999999999999888999999999999999863
No 64
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Probab=99.98 E-value=9.1e-31 Score=285.29 Aligned_cols=282 Identities=23% Similarity=0.294 Sum_probs=199.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+.++|+||||||||++||..|++.|++|+|+|+.+.+||...+ .+|...+.
T Consensus 429 ~~~kVaIIG~GPAGLsaA~~La~~G~~VtV~E~~~~~GG~l~~--gip~~rl~--------------------------- 479 (1006)
T PRK12775 429 KLGKVAICGSGPAGLAAAADLVKYGVDVTVYEALHVVGGVLQY--GIPSFRLP--------------------------- 479 (1006)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCcceeec--cCCccCCC---------------------------
Confidence 4579999999999999999999999999999998889886332 23322110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CC--CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~~pg~~~~~ 198 (507)
..+.....+.+++.|+++..+.... ..+.+. +- .....||+||||||+. |+ .+||.. .
T Consensus 480 -----------~e~~~~~~~~l~~~Gv~~~~~~~vg---~~~~~~--~l-~~~~~yDaViIATGa~~pr~l~IpG~~--l 540 (1006)
T PRK12775 480 -----------RDIIDREVQRLVDIGVKIETNKVIG---KTFTVP--QL-MNDKGFDAVFLGVGAGAPTFLGIPGEF--A 540 (1006)
T ss_pred -----------HHHHHHHHHHHHHCCCEEEeCCccC---CccCHH--HH-hhccCCCEEEEecCCCCCCCCCCCCcC--C
Confidence 0011112345666789888775321 112221 10 0124699999999995 54 455543 3
Q ss_pred ceEecchhhccc---------------cCCCCeEEEEcCcHHHHHHHHHHHhcCCe-eEEEcccCcc-CCCCCHHHHHHH
Q 010573 199 KRIVSSTGALAL---------------NEVPKKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAADI-VPSMDGEIRKQF 261 (507)
Q Consensus 199 ~~~~~~~~~~~~---------------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~-~~~~d~~~~~~~ 261 (507)
..+++..+++.. ...+++|+|||+|.+|+|+|..+.++|.+ |+++.++... ++....+
T Consensus 541 ~gV~~a~~fL~~~~~~~~~~~~~~~~~~~~Gk~VvVIGgG~tA~D~A~~a~rlGa~~Vtiv~rr~~~em~a~~~e----- 615 (1006)
T PRK12775 541 GQVYSANEFLTRVNLMGGDKFPFLDTPISLGKSVVVIGAGNTAMDCLRVAKRLGAPTVRCVYRRSEAEAPARIEE----- 615 (1006)
T ss_pred CCcEEHHHHHHHHHhcCccccccccCCccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeecCcccCCCCHHH-----
Confidence 456666554321 12479999999999999999999999975 7888766533 3322211
Q ss_pred HHHHHhcCcEEEcCceEEEEEEcC-CeEE-EEEee------cC--------CCceEEEEcCEEEEeecCCCCCCCCCCcc
Q 010573 262 QRSLEKQKMKFMLKTKVVGVDLSG-DGVK-LTLEP------AA--------GGEKTILEADVVLVSAGRTPFTAGLGLDK 325 (507)
Q Consensus 262 ~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~-v~~~~------~~--------~g~~~~i~~D~vi~a~G~~p~~~~l~~~~ 325 (507)
.+.+++.||++++++.++++..++ +.+. +++.. .. +++..++++|.||+|+|..|+..++ ...
T Consensus 616 ~~~a~eeGI~~~~~~~p~~i~~~~~G~v~~v~~~~~~l~~~d~~Gr~~~~~~g~~~~i~~D~Vi~AiG~~p~~~~~-~~~ 694 (1006)
T PRK12775 616 IRHAKEEGIDFFFLHSPVEIYVDAEGSVRGMKVEEMELGEPDEKGRRKPMPTGEFKDLECDTVIYALGTKANPIIT-QST 694 (1006)
T ss_pred HHHHHhCCCEEEecCCcEEEEeCCCCeEEEEEEEEEEecccCCCCCccccCCCceEEEEcCEEEECCCcCCChhhh-hcc
Confidence 234667899999999999997643 3332 43321 01 2233579999999999999998753 223
Q ss_pred cCceecCCCCeecCC-----CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 326 IGVETDKMGRIPVNE-----RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 326 ~gl~~~~~G~i~Vd~-----~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
.++.++++|.|.+|+ .++||+|||||+||++.++.++..|+.+|+.||.+|.
T Consensus 695 ~gl~l~~~G~I~vd~~~v~~~~~Ts~pgVFAaGDv~~G~~~vv~Ai~~Gr~AA~~I~ 751 (1006)
T PRK12775 695 PGLALNKWGNIAADDGKLESTQSTNLPGVFAGGDIVTGGATVILAMGAGRRAARSIA 751 (1006)
T ss_pred CCcccCCCCcEEeCCCccccCcCCCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHH
Confidence 468888889999997 7899999999999999988899999999999999985
No 65
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=99.98 E-value=1.9e-30 Score=263.58 Aligned_cols=281 Identities=22% Similarity=0.333 Sum_probs=201.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..++|+|||+||+|++||..|++.|++|+|+|+.+.+||...+ .+|...+..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~--gip~~~~~~-------------------------- 191 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTF--GIPSFKLDK-------------------------- 191 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeee--cCccccCCH--------------------------
Confidence 4579999999999999999999999999999999999986432 233321100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC---CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK---SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~---~~pg~~~~~ 198 (507)
.+.....+++++.|++++.+..... .+...+ ....||+||+|||+.+. .+||...
T Consensus 192 ------------~~~~~~~~~~~~~Gv~~~~~~~v~~-----~~~~~~---~~~~~D~vilAtGa~~~~~~~i~g~~~-- 249 (467)
T TIGR01318 192 ------------AVLSRRREIFTAMGIEFHLNCEVGR-----DISLDD---LLEDYDAVFLGVGTYRSMRGGLPGEDA-- 249 (467)
T ss_pred ------------HHHHHHHHHHHHCCCEEECCCEeCC-----ccCHHH---HHhcCCEEEEEeCCCCCCcCCCCCcCC--
Confidence 0111123556677888876643211 111111 12469999999999863 4565443
Q ss_pred ceEecchhhc--------cc---------cCCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCcc-CCCCCHHHHH
Q 010573 199 KRIVSSTGAL--------AL---------NEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI-VPSMDGEIRK 259 (507)
Q Consensus 199 ~~~~~~~~~~--------~~---------~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~-~~~~d~~~~~ 259 (507)
..+++..++. .+ ...+++++|||+|.+|+|+|..+.++|. +||++++++.. ++..+.++
T Consensus 250 ~gV~~a~~~l~~~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~a~~~Ga~~Vtvv~r~~~~~~~~~~~e~-- 327 (467)
T TIGR01318 250 PGVLQALPFLIANTRQLMGLPESPEEPLIDVEGKRVVVLGGGDTAMDCVRTAIRLGAASVTCAYRRDEANMPGSRREV-- 327 (467)
T ss_pred CCcEEHHHHHHHHHHHhcCCCccccccccccCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEEecCcccCCCCHHHH--
Confidence 3344322211 00 1246899999999999999999999995 79999987764 55444333
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEEcC-CeEE-EEEeec---------------CCCceEEEEcCEEEEeecCCCCCCCCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDLSG-DGVK-LTLEPA---------------AGGEKTILEADVVLVSAGRTPFTAGLG 322 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~-v~~~~~---------------~~g~~~~i~~D~vi~a~G~~p~~~~l~ 322 (507)
+.+++.||++++++.++++..++ +.+. +++... .+++..++++|.||+++|++|+...+
T Consensus 328 ---~~~~~~GV~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~~- 403 (467)
T TIGR01318 328 ---ANAREEGVEFLFNVQPVYIECDEDGRVTGVGLVRTALGEPDADGRRRPVPVAGSEFVLPADVVIMAFGFQPHAMPW- 403 (467)
T ss_pred ---HHHHhcCCEEEecCCcEEEEECCCCeEEEEEEEEEEecccCCCCCccceecCCceEEEECCEEEECCcCCCCcccc-
Confidence 34567899999999999997643 3332 333210 02345689999999999999986433
Q ss_pred CcccCceecCCCCeecC----CCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 323 LDKIGVETDKMGRIPVN----ERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 323 ~~~~gl~~~~~G~i~Vd----~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
++..+++++++|+|.|| ++++|+.|+|||+||++.++.++..|+.+|+.||.+|..
T Consensus 404 ~~~~gl~~~~~g~i~vd~~~~~~~~T~~~gVfa~GD~~~~~~~~~~Ai~~G~~aA~~i~~ 463 (467)
T TIGR01318 404 LAGHGITLDSWGRIITGDVSYLPYQTTNPKIFAGGDAVRGADLVVTAVAEGRQAAQGILD 463 (467)
T ss_pred ccccCccCCCCCCEEeCCccccCccCCCCCEEEECCcCCCccHHHHHHHHHHHHHHHHHH
Confidence 56678888888999999 678999999999999998888889999999999999853
No 66
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Probab=99.97 E-value=2.2e-29 Score=256.73 Aligned_cols=285 Identities=24% Similarity=0.316 Sum_probs=193.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..++|+|||||+||++||..|++.|++|+|+|+.+.+||.+.+ .+|...+ +
T Consensus 142 ~~~~V~IIGaG~aGl~aA~~L~~~g~~V~v~e~~~~~gG~l~~--gip~~~~--------------------------~- 192 (485)
T TIGR01317 142 TGKKVAVVGSGPAGLAAADQLNRAGHTVTVFEREDRCGGLLMY--GIPNMKL--------------------------D- 192 (485)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCCCceeec--cCCCccC--------------------------C-
Confidence 4479999999999999999999999999999998888886432 1221100 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CC--CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~~pg~~~~~ 198 (507)
.. +.....+++++.+++++.+.....+ +.. + .....||+|++|||+. |. .+||.+ .
T Consensus 193 ~~-----------~~~~~~~~~~~~Gv~~~~~~~v~~~-----~~~-~--~~~~~~d~VilAtGa~~~~~l~i~G~~--~ 251 (485)
T TIGR01317 193 KA-----------IVDRRIDLLSAEGIDFVTNTEIGVD-----ISA-D--ELKEQFDAVVLAGGATKPRDLPIPGRE--L 251 (485)
T ss_pred HH-----------HHHHHHHHHHhCCCEEECCCEeCCc-----cCH-H--HHHhhCCEEEEccCCCCCCcCCCCCcC--C
Confidence 00 0111134566778998877543211 111 1 1235799999999998 54 445543 3
Q ss_pred ceEecchhhc----------------cccCCCCeEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCccCCCC--------
Q 010573 199 KRIVSSTGAL----------------ALNEVPKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADIVPSM-------- 253 (507)
Q Consensus 199 ~~~~~~~~~~----------------~~~~~~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~~~~~-------- 253 (507)
..+++..+++ .....+++|+|||+|.+|+|+|..+.+.| .+|+++++.+..+...
T Consensus 252 ~gV~~~~~~l~~~~~~~~~~~~~~~~~~~~~gk~VvViGgG~~g~d~a~~a~~~ga~~V~vv~~~~~~~~~~~~~~~~~~ 331 (485)
T TIGR01317 252 KGIHYAMEFLPSATKALLGKDFKDIIFIKAKGKKVVVIGGGDTGADCVGTSLRHGAASVHQFEIMPKPPEARAKDNPWPE 331 (485)
T ss_pred CCcEeHHHHHHHHhhhhccccccccccccCCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEEecCCChhhcccccCCCc
Confidence 3344332211 11134799999999999999998888877 4799998877643211
Q ss_pred -CH--HHHHHHHHHHHhcCcEE-EcCceEEEEEEcC-CeEE-EEEe-----ecC---------CCceEEEEcCEEEEeec
Q 010573 254 -DG--EIRKQFQRSLEKQKMKF-MLKTKVVGVDLSG-DGVK-LTLE-----PAA---------GGEKTILEADVVLVSAG 313 (507)
Q Consensus 254 -d~--~~~~~~~~~l~~~Gv~i-~~~~~v~~i~~~~-~~v~-v~~~-----~~~---------~g~~~~i~~D~vi~a~G 313 (507)
.. +.....++..+..|+.+ ++++.+.++..++ +.+. +++. ..+ .++..++++|.||+|+|
T Consensus 332 ~~~~~e~~~a~~e~~~~~gv~~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~Gr~~p~~~~g~~~~i~~D~Vi~AiG 411 (485)
T TIGR01317 332 WPRVYRVDYAHEEAAAHYGRDPREYSILTKEFIGDDEGKVTALRTVRVEWKKSQDGKWQFVEIPGSEEVFEADLVLLAMG 411 (485)
T ss_pred cchhhhhHHHHHhhhhhcCccceEEecCcEEEEEcCCCeEEEEEEEEEEeccCCCCCccceecCCceEEEECCEEEEccC
Confidence 11 12223344444457654 4677788887653 3333 3321 111 23345899999999999
Q ss_pred CC-CCCCCCCCcccCceecCCCCee-cCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 314 RT-PFTAGLGLDKIGVETDKMGRIP-VNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 314 ~~-p~~~~l~~~~~gl~~~~~G~i~-Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
.. |++.+ ++..+++++++|.+. +|++++|+.|||||+|||+.++..+..|+.+|+.||.+|..
T Consensus 412 ~~~p~~~~--~~~~gl~~~~~G~i~~~~~~~~Ts~~gVfAaGD~~~g~~~~~~Av~~G~~AA~~i~~ 476 (485)
T TIGR01317 412 FVGPEQIL--LDDFGVKKTRRGNISAGYDDYSTSIPGVFAAGDCRRGQSLIVWAINEGRKAAAAVDR 476 (485)
T ss_pred cCCCcccc--ccccCcccCCCCCEEecCCCceECCCCEEEeeccCCCcHHHHHHHHHHHHHHHHHHH
Confidence 86 88875 567788888888885 56789999999999999998888889999999999999853
No 67
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=99.97 E-value=3.5e-29 Score=263.74 Aligned_cols=282 Identities=20% Similarity=0.285 Sum_probs=200.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
...+|+|||+||||+++|..|++.|++|+|+|+++.+||.+.+ + +|...+ +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~-g-ip~~~l--------------------------~~ 360 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTF-G-IPPFKL--------------------------DK 360 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeec-c-CCcccC--------------------------CH
Confidence 4679999999999999999999999999999999999987432 2 222111 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC---CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK---SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~---~~pg~~~~~ 198 (507)
.+.....++++..|+++..+..... .+...+ ....||+|++|||+.+. .+|+...
T Consensus 361 ------------~~~~~~~~~~~~~Gv~~~~~~~v~~-----~~~~~~---l~~~~DaV~latGa~~~~~~~i~g~~~-- 418 (639)
T PRK12809 361 ------------TVLSQRREIFTAMGIDFHLNCEIGR-----DITFSD---LTSEYDAVFIGVGTYGMMRADLPHEDA-- 418 (639)
T ss_pred ------------HHHHHHHHHHHHCCeEEEcCCccCC-----cCCHHH---HHhcCCEEEEeCCCCCCCCCCCCCCcc--
Confidence 0111123456677888877653211 111111 23469999999999753 3455432
Q ss_pred ceEecchh--------hccc---------cCCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCcc-CCCCCHHHHH
Q 010573 199 KRIVSSTG--------ALAL---------NEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI-VPSMDGEIRK 259 (507)
Q Consensus 199 ~~~~~~~~--------~~~~---------~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~-~~~~d~~~~~ 259 (507)
..+++..+ ...+ ...+++++|+|+|.+++++|..+.+.|. +||++++++.. ++..+.++.
T Consensus 419 ~gv~~a~~~l~~~~~~~~~~~~~~~~~~~~~~gk~vvViGgG~~a~d~a~~~~~~Ga~~Vt~v~rr~~~~~~~~~~e~~- 497 (639)
T PRK12809 419 PGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVV- 497 (639)
T ss_pred CCcEeHHHHHHHHHHhhccCccccccccccCCCCeEEEECCcHHHHHHHHHHHHcCCCeEEEeeecCcccCCCCHHHHH-
Confidence 23333211 1111 1247899999999999999999999995 79999987655 554443332
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEEcC-CeEE-EEEee---c---C---------CCceEEEEcCEEEEeecCCCCCCCCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDLSG-DGVK-LTLEP---A---A---------GGEKTILEADVVLVSAGRTPFTAGLG 322 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~-v~~~~---~---~---------~g~~~~i~~D~vi~a~G~~p~~~~l~ 322 (507)
.+++.||++++++.++++..++ +.+. +.+.. . . .++..++++|.||+|+|+.|+...+
T Consensus 498 ----~a~~eGv~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~g~~~~i~aD~Vi~AiG~~p~~~~~- 572 (639)
T PRK12809 498 ----NAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPW- 572 (639)
T ss_pred ----HHHHcCCeEEeccCCEEEEECCCCeEEEEEEEEEEecCcCCCCCccceecCCceEEEECCEEEECcCCCCCcccc-
Confidence 2467899999999999997654 3343 33211 0 0 2345689999999999999976433
Q ss_pred CcccCceecCCCCeecCC----CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCC
Q 010573 323 LDKIGVETDKMGRIPVNE----RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 323 ~~~~gl~~~~~G~i~Vd~----~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
++..+++++++|.|.||+ +++|+.|+|||+||++.++.++..|+.+|+.||.+|...
T Consensus 573 ~~~~gl~~~~~G~i~vd~~~~~~~~Ts~~gVfA~GD~~~g~~~vv~Ai~~Gr~AA~~i~~~ 633 (639)
T PRK12809 573 LQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTL 633 (639)
T ss_pred ccccCcccCCCCCEEeCCCcccCcccCCCCEEEcCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 567789999889999986 488999999999999988889999999999999998643
No 68
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6e-30 Score=232.24 Aligned_cols=290 Identities=29% Similarity=0.404 Sum_probs=215.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..|||+||||||||-+||.+.+|+|.+.-|+- +++||+.+..-.|- ++ ..-+..+-
T Consensus 210 ~~yDVLvVGgGPAgaaAAiYaARKGiRTGl~a--erfGGQvldT~~IE-------------------Nf---Isv~~teG 265 (520)
T COG3634 210 DAYDVLVVGGGPAGAAAAIYAARKGIRTGLVA--ERFGGQVLDTMGIE-------------------NF---ISVPETEG 265 (520)
T ss_pred CCceEEEEcCCcchhHHHHHHHhhcchhhhhh--hhhCCeeccccchh-------------------he---eccccccc
Confidence 46999999999999999999999999987773 57898765322110 00 00011112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEe-----cCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI-----SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPG 193 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~-----d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg 193 (507)
+ ++...++...+++.|++... .+..+ ..+-..|++.+| -.+.++.+|||||++.+ .+||
T Consensus 266 p-----------kl~~ale~Hv~~Y~vDimn~qra~~l~~a~~~~~l~ev~l~nG--avLkaktvIlstGArWRn~nvPG 332 (520)
T COG3634 266 P-----------KLAAALEAHVKQYDVDVMNLQRASKLEPAAVEGGLIEVELANG--AVLKARTVILATGARWRNMNVPG 332 (520)
T ss_pred h-----------HHHHHHHHHHhhcCchhhhhhhhhcceecCCCCccEEEEecCC--ceeccceEEEecCcchhcCCCCc
Confidence 2 22333444555566666544 22222 234577888898 88999999999999875 5677
Q ss_pred Cc-cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh-cCcE
Q 010573 194 IT-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKMK 271 (507)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~ 271 (507)
.. .....+..+..+......+|+|.|||||.+|+|.|-.|+-.-..||+++..+.+- .-+.+++.++. .+++
T Consensus 333 E~e~rnKGVayCPHCDGPLF~gK~VAVIGGGNSGvEAAIDLAGiv~hVtllEF~~eLk------AD~VLq~kl~sl~Nv~ 406 (520)
T COG3634 333 EDEYRNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPELK------ADAVLQDKLRSLPNVT 406 (520)
T ss_pred hHHHhhCCeeeCCCCCCcccCCceEEEECCCcchHHHHHhHHhhhheeeeeecchhhh------hHHHHHHHHhcCCCcE
Confidence 54 4455666666666666679999999999999999999998888999998665431 22345555554 4999
Q ss_pred EEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 272 FMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
++++...+++.++++++. +...+..+++...++-+-|++-+|..||+++ ++.. ++++++|-|.||....||+|+||
T Consensus 407 ii~na~Ttei~Gdg~kV~Gl~Y~dr~sge~~~l~LeGvFVqIGL~PNT~W--Lkg~-vel~~rGEIivD~~g~TsvpGvF 483 (520)
T COG3634 407 IITNAQTTEVKGDGDKVTGLEYRDRVSGEEHHLELEGVFVQIGLLPNTEW--LKGA-VELNRRGEIIVDARGETNVPGVF 483 (520)
T ss_pred EEecceeeEEecCCceecceEEEeccCCceeEEEeeeeEEEEecccChhH--hhch-hhcCcCccEEEecCCCcCCCcee
Confidence 999999999999877776 7777777778888999999999999999999 4555 89999999999999999999999
Q ss_pred EecCCCCCC-CcHhHHHHHHHHHHHHHc
Q 010573 351 AIGDVIPGP-MLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 351 A~GD~a~~~-~~~~~A~~~g~~aa~~i~ 377 (507)
|+|||+..| .....|+-+|..|+...+
T Consensus 484 AAGD~T~~~yKQIIIamG~GA~AaL~AF 511 (520)
T COG3634 484 AAGDCTTVPYKQIIIAMGEGAKASLSAF 511 (520)
T ss_pred ecCcccCCccceEEEEecCcchhhhhhh
Confidence 999999654 344556666666665543
No 69
>PRK13984 putative oxidoreductase; Provisional
Probab=99.97 E-value=1.1e-28 Score=259.97 Aligned_cols=281 Identities=25% Similarity=0.321 Sum_probs=191.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
....+|+|||+|+||+++|..|++.|++|+|+|+++..||...+ .+|...+.
T Consensus 281 ~~~~~v~IIGaG~aGl~aA~~L~~~G~~v~vie~~~~~gG~~~~--~i~~~~~~-------------------------- 332 (604)
T PRK13984 281 KKNKKVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGGVMRY--GIPSYRLP-------------------------- 332 (604)
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceEee--cCCcccCC--------------------------
Confidence 45678999999999999999999999999999998888886432 12211100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC---CCCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV---KSLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p---~~~pg~~~~ 197 (507)
.. +.....+++++.+++++.+.....+ +..++ ....||+||+|||+.+ +.+||..
T Consensus 333 -~~-----------~~~~~~~~~~~~gv~~~~~~~v~~~-----~~~~~---~~~~yD~vilAtGa~~~r~l~i~G~~-- 390 (604)
T PRK13984 333 -DE-----------ALDKDIAFIEALGVKIHLNTRVGKD-----IPLEE---LREKHDAVFLSTGFTLGRSTRIPGTD-- 390 (604)
T ss_pred -HH-----------HHHHHHHHHHHCCcEEECCCEeCCc-----CCHHH---HHhcCCEEEEEcCcCCCccCCCCCcC--
Confidence 00 0111124566778888777543211 11111 2357999999999864 3455543
Q ss_pred CceEecchhhcc-c----------cCCCCeEEEEcCcHHHHHHHHHHHhcCC------eeEEEccc--CccCCCCCHHHH
Q 010573 198 EKRIVSSTGALA-L----------NEVPKKLVVIGAGYIGLEMGSVWARLGS------EVTVVEFA--ADIVPSMDGEIR 258 (507)
Q Consensus 198 ~~~~~~~~~~~~-~----------~~~~~~vvVvG~G~~g~e~A~~l~~~g~------~Vtlv~~~--~~~~~~~d~~~~ 258 (507)
...+++..+.+. + ...+++++|||||.+|+|+|..+.+++. +|+++... ...++..+.+
T Consensus 391 ~~gv~~a~~~l~~~~~~~~~~~~~~~~~k~VvVIGGG~~g~e~A~~l~r~~~~~~g~~~V~v~~~~r~~~~~~~~~~e-- 468 (604)
T PRK13984 391 HPDVIQALPLLREIRDYLRGEGPKPKIPRSLVVIGGGNVAMDIARSMARLQKMEYGEVNVKVTSLERTFEEMPADMEE-- 468 (604)
T ss_pred CcCeEeHHHHHHHHHhhhccCCCcCCCCCcEEEECCchHHHHHHHHHHhccccccCceEEEEeccccCcccCCCCHHH--
Confidence 334454443332 1 1237899999999999999999998853 67876432 2223332222
Q ss_pred HHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeec-----C---------CCceEEEEcCEEEEeecCCCCCCCCCC
Q 010573 259 KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPA-----A---------GGEKTILEADVVLVSAGRTPFTAGLGL 323 (507)
Q Consensus 259 ~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~-----~---------~g~~~~i~~D~vi~a~G~~p~~~~l~~ 323 (507)
+.+ +.+.||++++++.++++..+++.+. +++... . +++..++++|.|++|+|++|++.++..
T Consensus 469 --~~~-~~~~GV~i~~~~~~~~i~~~~g~v~~v~~~~~~~~~~~~G~~~~~~~~g~~~~i~aD~Vi~aiG~~p~~~~l~~ 545 (604)
T PRK13984 469 --IEE-GLEEGVVIYPGWGPMEVVIENDKVKGVKFKKCVEVFDEEGRFNPKFDESDQIIVEADMVVEAIGQAPDYSYLPE 545 (604)
T ss_pred --HHH-HHHcCCEEEeCCCCEEEEccCCEEEEEEEEEEeeccCCCCCccceecCCceEEEECCEEEEeeCCCCChhhhhh
Confidence 222 2357999999998888866555443 433210 0 234568999999999999999887531
Q ss_pred c-ccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 324 D-KIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 324 ~-~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+ ..+++. ++|.|.||+++||++|+|||+||++.++.+ ..|+.+|+.||.+|..
T Consensus 546 ~~~~~l~~-~~G~i~vd~~~~Ts~~gVfAaGD~~~~~~~-v~Ai~~G~~AA~~I~~ 599 (604)
T PRK13984 546 ELKSKLEF-VRGRILTNEYGQTSIPWLFAGGDIVHGPDI-IHGVADGYWAAEGIDM 599 (604)
T ss_pred hhccCccc-cCCeEEeCCCCccCCCCEEEecCcCCchHH-HHHHHHHHHHHHHHHH
Confidence 1 123555 358899999999999999999999988764 6799999999999853
No 70
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion]
Probab=99.97 E-value=1.7e-29 Score=236.31 Aligned_cols=292 Identities=21% Similarity=0.318 Sum_probs=210.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..+..+|||+|+|.+|.+....|-...++|++|++++.+ +.....||-.. . .+
T Consensus 52 ~~kKk~vVVLGsGW~a~S~lk~ldts~YdV~vVSPRnyF----lFTPLLpS~~v----------------G-------Tv 104 (491)
T KOG2495|consen 52 GGKKKRVVVLGSGWGAISLLKKLDTSLYDVTVVSPRNYF----LFTPLLPSTTV----------------G-------TV 104 (491)
T ss_pred CCCCceEEEEcCchHHHHHHHhccccccceEEeccccce----EEeeccCCccc----------------c-------ce
Confidence 445689999999999999999998889999999986643 11111222110 0 01
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH-hC-CcEEEEeEEEEecCCEEEEEc----cCC--ceEEEEeCeEEEccCCCC--C
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFK-KN-KVTYVKGYGKFISPSEVSVDT----IEG--GNTVVKGKNIIIATGSDV--K 189 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~~~~~d~~~~~v~~----~~g--~~~~~~~d~lvlAtG~~p--~ 189 (507)
+.+.+. +-+..... .+ ++.++..+...+|+....|.. .++ ....+.||+||+|+|+.+ +
T Consensus 105 e~rSIv-----------EPIr~i~r~k~~~~~y~eAec~~iDp~~k~V~~~s~t~~~~~~e~~i~YDyLViA~GA~~~TF 173 (491)
T KOG2495|consen 105 ELRSIV-----------EPIRAIARKKNGEVKYLEAECTKIDPDNKKVHCRSLTADSSDKEFVIGYDYLVIAVGAEPNTF 173 (491)
T ss_pred eehhhh-----------hhHHHHhhccCCCceEEecccEeecccccEEEEeeeccCCCcceeeecccEEEEeccCCCCCC
Confidence 111111 11111121 22 678888888888877665543 222 346899999999999998 4
Q ss_pred CCCCCccCCceEecchhhccc-------------c-------CCCCeEEEEcCcHHHHHHHHHHHhc-------------
Q 010573 190 SLPGITIDEKRIVSSTGALAL-------------N-------EVPKKLVVIGAGYIGLEMGSVWARL------------- 236 (507)
Q Consensus 190 ~~pg~~~~~~~~~~~~~~~~~-------------~-------~~~~~vvVvG~G~~g~e~A~~l~~~------------- 236 (507)
.+||.......+--..++.++ . ..-.+++|||||++|+|+|..|+.+
T Consensus 174 gipGV~e~~~FLKEv~dAqeIR~~~~~~le~a~~~~l~~eerkRlLh~VVVGGGPTGVEFAaEL~Dfi~~Dl~k~yp~l~ 253 (491)
T KOG2495|consen 174 GIPGVEENAHFLKEVEDAQEIRRKVIDNLEKAELPGLSDEERKRLLHFVVVGGGPTGVEFAAELADFIPEDLRKIYPELK 253 (491)
T ss_pred CCCchhhchhhhhhhhHHHHHHHHHHHHHHHhhcCCCChHHhhheEEEEEECCCCcceeehHHHHHHHHHHHHHhhhcch
Confidence 678776444333333333322 1 1124799999999999999998765
Q ss_pred -CCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 237 -GSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 237 -g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
..+||+++..|.+++.||+.+.+..++++.+.||++.+++.|.++ ++..+.+... +|+.+++++-+++|++|..
T Consensus 254 ~~i~vtLiEA~d~iL~mFdkrl~~yae~~f~~~~I~~~~~t~Vk~V--~~~~I~~~~~---~g~~~~iPYG~lVWatG~~ 328 (491)
T KOG2495|consen 254 KDIKVTLIEAADHILNMFDKRLVEYAENQFVRDGIDLDTGTMVKKV--TEKTIHAKTK---DGEIEEIPYGLLVWATGNG 328 (491)
T ss_pred hheEEEeeccchhHHHHHHHHHHHHHHHHhhhccceeecccEEEee--cCcEEEEEcC---CCceeeecceEEEecCCCC
Confidence 358999999999999999999999999999999999999999998 4445555543 5566899999999999988
Q ss_pred CCCCCCCCcccCceecCCC--CeecCCCCC-CCCCCeEEecCCC---CCCCcHhHHHHHHHHHHHHHc
Q 010573 316 PFTAGLGLDKIGVETDKMG--RIPVNERFA-TNIPGVYAIGDVI---PGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 316 p~~~~l~~~~~gl~~~~~G--~i~Vd~~~~-t~~~~IyA~GD~a---~~~~~~~~A~~~g~~aa~~i~ 377 (507)
|..- ...+.-.+++.| ++.||++|| .+.+||||+|||+ +.+..++.|.+||.++|+++-
T Consensus 329 ~rp~---~k~lm~~i~e~~rr~L~vDE~LrV~G~~nvfAiGDca~~~~~~~tAQVA~QqG~yLAk~fn 393 (491)
T KOG2495|consen 329 PRPV---IKDLMKQIDEQGRRGLAVDEWLRVKGVKNVFAIGDCADQRGLKPTAQVAEQQGAYLAKNFN 393 (491)
T ss_pred Cchh---hhhHhhcCCccCceeeeeeceeeccCcCceEEeccccccccCccHHHHHHHHHHHHHHHHH
Confidence 8653 223333344445 899999999 6899999999999 334589999999999999873
No 71
>PLN02852 ferredoxin-NADP+ reductase
Probab=99.96 E-value=1.3e-27 Score=239.59 Aligned_cols=287 Identities=22% Similarity=0.290 Sum_probs=193.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHH--CCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQ--LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
...+|+||||||||++||..|++ .|++|+|+|+.+.+||... .+..|.+...
T Consensus 25 ~~~~VaIVGaGPAGl~AA~~L~~~~~g~~Vtv~E~~p~pgGlvr-~gvaP~~~~~------------------------- 78 (491)
T PLN02852 25 EPLHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVR-SGVAPDHPET------------------------- 78 (491)
T ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCeEEEEecCCCCcceEe-eccCCCcchh-------------------------
Confidence 35689999999999999999987 6999999999999998643 2322321100
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC-C--CCCCCcc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV-K--SLPGITI 196 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p-~--~~pg~~~ 196 (507)
..+...+..++...+++++.+.... ..+.+++ ....||+||||||+.+ . .+||.+
T Consensus 79 -------------k~v~~~~~~~~~~~~v~~~~nv~vg-----~dvtl~~---L~~~yDaVIlAtGa~~~~~l~IpG~d- 136 (491)
T PLN02852 79 -------------KNVTNQFSRVATDDRVSFFGNVTLG-----RDVSLSE---LRDLYHVVVLAYGAESDRRLGIPGED- 136 (491)
T ss_pred -------------HHHHHHHHHHHHHCCeEEEcCEEEC-----ccccHHH---HhhhCCEEEEecCCCCCCCCCCCCCC-
Confidence 0111222344555677776543221 1123322 2247999999999975 2 455543
Q ss_pred CCceEecchhhcc----------c---cCCCCeEEEEcCcHHHHHHHHHHHhc--------------------CC-eeEE
Q 010573 197 DEKRIVSSTGALA----------L---NEVPKKLVVIGAGYIGLEMGSVWARL--------------------GS-EVTV 242 (507)
Q Consensus 197 ~~~~~~~~~~~~~----------~---~~~~~~vvVvG~G~~g~e~A~~l~~~--------------------g~-~Vtl 242 (507)
...+++..++.. + ...+++++|||+|++|+|+|..|.+. |. +|++
T Consensus 137 -~~gV~~a~~fl~~~ng~~d~~~~~~~~~~gk~VvVIGgGnvAlD~Ar~L~~~~~~l~~tdi~~~~l~~l~~~~~~~V~i 215 (491)
T PLN02852 137 -LPGVLSAREFVWWYNGHPDCVHLPPDLKSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYL 215 (491)
T ss_pred -CCCeEEHHHHHHHhhcchhhhhhhhcccCCCEEEEECCCHHHHHHHHHHHhCccccccccccHHHHHHHhhCCCCEEEE
Confidence 445666655532 1 12478999999999999999998875 64 6999
Q ss_pred EcccCcc-CCCCCHHHHH-------------------------------------HHHHHHHh---------cCcEEEcC
Q 010573 243 VEFAADI-VPSMDGEIRK-------------------------------------QFQRSLEK---------QKMKFMLK 275 (507)
Q Consensus 243 v~~~~~~-~~~~d~~~~~-------------------------------------~~~~~l~~---------~Gv~i~~~ 275 (507)
+.|+... .+...+++.+ .+.+...+ +++.+++.
T Consensus 216 v~RRg~~~~~ft~~Elrel~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~l~~~a~~~~~~~~~~~~~v~~~f~ 295 (491)
T PLN02852 216 VGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELHFVFF 295 (491)
T ss_pred EEcCChHhCCCCHHHHHHHhccCCCceeechhhhccccchhhhhccchhhHHHHHHHHHHHhhcccccCCCCceEEEEcc
Confidence 9888743 2221222211 12222112 57999999
Q ss_pred ceEEEEEEc--C-CeEE-EEEeec--------------CCCceEEEEcCEEEEeecCC--CCCCC-CCCcccCceecCCC
Q 010573 276 TKVVGVDLS--G-DGVK-LTLEPA--------------AGGEKTILEADVVLVSAGRT--PFTAG-LGLDKIGVETDKMG 334 (507)
Q Consensus 276 ~~v~~i~~~--~-~~v~-v~~~~~--------------~~g~~~~i~~D~vi~a~G~~--p~~~~-l~~~~~gl~~~~~G 334 (507)
...++|..+ + +.+. +++... .+++.+++++|.||.++|++ |...+ + ....++..+.+|
T Consensus 296 ~sP~ei~~~~~~~~~v~~l~~~~~~l~~~~~~g~~~~~~tge~~~i~~D~Vi~aIG~~~~p~~~l~f-~~~~gv~~n~~G 374 (491)
T PLN02852 296 RNPTRFLDSGDGNGHVAGVKLERTVLEGAAGSGKQVAVGTGEFEDLPCGLVLKSIGYKSLPVDGLPF-DHKRGVVPNVHG 374 (491)
T ss_pred CCCeEEEccCCCCCcEEEEEEEEeecCCCcccCCcccCCCCCEEEEECCEEEEeecCCCCCCCCCcc-ccCcCeeECCCc
Confidence 999999742 1 2332 444310 13455679999999999998 55542 2 233467778889
Q ss_pred CeecCCCCCCCCCCeEEecCCCCCCC-cHhHHHHHHHHHHHHHcC
Q 010573 335 RIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 335 ~i~Vd~~~~t~~~~IyA~GD~a~~~~-~~~~A~~~g~~aa~~i~~ 378 (507)
+|.+|+.++|++|||||+|||..+|. +...++.+|+.++++|+.
T Consensus 375 ~V~~d~~~~T~ipGvyAaGDi~~Gp~gvI~t~~~dA~~ta~~i~~ 419 (491)
T PLN02852 375 RVLSSASGADTEPGLYVVGWLKRGPTGIIGTNLTCAEETVASIAE 419 (491)
T ss_pred eEEeCCCCccCCCCEEEeeeEecCCCCeeeecHhhHHHHHHHHHH
Confidence 99999988999999999999998776 778899999999999874
No 72
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=99.96 E-value=8.2e-27 Score=236.48 Aligned_cols=382 Identities=27% Similarity=0.302 Sum_probs=268.2
Q ss_pred EEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 46 VVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 46 vvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
++|||+|++|+++|..+++. +.+++++.++...... .|.-...+ ..+.. ....
T Consensus 1 ivivG~g~aG~~aa~~l~~~~~~~~i~i~~~~~~~~~~----~~~~~~~~---------------~~~~~------~~~~ 55 (415)
T COG0446 1 IVIVGGGAAGLSAATTLRRLLLAAEITLIGREPKYSYY----RCPLSLYV---------------GGGIA------SLED 55 (415)
T ss_pred CEEECCcHHHHHHHHHHHhcCCCCCEEEEeCCCCCCCC----CCccchHH---------------hcccC------CHHH
Confidence 58999999999999999886 5678877775433211 00000000 00000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEe
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~ 202 (507)
+..... +..+.++++..+ .+..+|+....+.+.++ .+.||++++|||++|...++.. ...++
T Consensus 56 -----------~~~~~~-~~~~~~i~~~~~~~v~~id~~~~~v~~~~g---~~~yd~LvlatGa~~~~~~~~~--~~~~~ 118 (415)
T COG0446 56 -----------LRYPPR-FNRATGIDVRTGTEVTSIDPENKVVLLDDG---EIEYDYLVLATGARPRPPPISD--WEGVV 118 (415)
T ss_pred -----------hcccch-hHHhhCCEEeeCCEEEEecCCCCEEEECCC---cccccEEEEcCCCcccCCCccc--cCceE
Confidence 000001 123557888776 57889998888888887 8899999999999997665222 22223
Q ss_pred cc---hhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCC-HHHHHHHHHHHHhcCcEEEcC
Q 010573 203 SS---TGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMD-GEIRKQFQRSLEKQKMKFMLK 275 (507)
Q Consensus 203 ~~---~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d-~~~~~~~~~~l~~~Gv~i~~~ 275 (507)
+. .+...+. ...++++|+|+|++|+|+|..+.+.|++|++++..+++++.+. +++.+.+.+.+++.||+++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~vvG~G~~gle~A~~~~~~G~~v~l~e~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 198 (415)
T COG0446 119 TLRLREDAEALKGGAEPPKDVVVVGAGPIGLEAAEAAAKRGKKVTLIEAADRLGGQLLDPEVAEELAELLEKYGVELLLG 198 (415)
T ss_pred EECCHHHHHHHHHHHhccCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcccccchhhhhHHHHHHHHHHHHHCCcEEEeC
Confidence 22 2222221 1158999999999999999999999999999999999988777 899999999999999999999
Q ss_pred ceEEEEEEcCCeEE---EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccC-ceecCCCCeecCCCCCCC-CCCeE
Q 010573 276 TKVVGVDLSGDGVK---LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIG-VETDKMGRIPVNERFATN-IPGVY 350 (507)
Q Consensus 276 ~~v~~i~~~~~~v~---v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~g-l~~~~~G~i~Vd~~~~t~-~~~Iy 350 (507)
..+.+++...+... +... ++..+++|.+++++|.+|+..+ .+..+ .....+|+|.||++++|+ .++||
T Consensus 199 ~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~g~~p~~~l--~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~ 271 (415)
T COG0446 199 TKVVGVEGKGNTLVVERVVGI-----DGEEIKADLVIIGPGERPNVVL--ANDALPGLALAGGAVLVDERGGTSKDPDVY 271 (415)
T ss_pred CceEEEEcccCcceeeEEEEe-----CCcEEEeeEEEEeecccccHHH--HhhCccceeccCCCEEEccccccCCCCCEE
Confidence 99999987665433 2332 5678999999999999999764 33333 145566889999999998 99999
Q ss_pred EecCCCCCC----------CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEE--EEcCCCeeeecCCHHHHHHcCCCEEEE
Q 010573 351 AIGDVIPGP----------MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGV--VYTHPEVASVGKTEEQVKELGVEYRVG 418 (507)
Q Consensus 351 A~GD~a~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~~~~~vG~~~~~~~~~~~~~~~~ 418 (507)
|+|||+..+ ..+..|..+++.++.++.+. ... ....+.. -.........|+++. +...++ ...
T Consensus 272 a~GD~~~~~~~~~~~~~~~~~~~~a~~~~~i~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~-~~~ 346 (415)
T COG0446 272 AAGDVAEIPAAETGKGGRIALWAIAVAAGRIAAENIAGA-LRI-PGLLGTVISDVGDLCAASTGLTEG--KERGID-VVL 346 (415)
T ss_pred eccceEeeecccCCceeeeechhhHhhhhHHHHHHhccc-ccc-ccccCceEEEEcCeEEEEecCCcc--ccccee-eeE
Confidence 999998422 26788999999999999876 222 2333433 334556788898887 444444 222
Q ss_pred EEecCcccchhhcCC-cceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCc
Q 010573 419 KFPFLANSRAKAIDD-AEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVC 483 (507)
Q Consensus 419 ~~~~~~~~~~~~~~~-~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~ 483 (507)
.+......+....+. .....|++++.++++++|++. -. ....+..+..++..+.++.++....
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (415)
T COG0446 347 VVSGGKDPRAHLYPGAELVGIKLVGDADTGRILGGQE-LE-VLKRIGALALAIGLGDTVAELDALD 410 (415)
T ss_pred EEeccCcccccccCCCCeEEEEEEEcCcccceehhhh-HH-HHhhhhhhhhhhhhcCchhhhhhcc
Confidence 222333323333332 334788888889999999998 33 6668888999999999888886654
No 73
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=8.2e-28 Score=205.37 Aligned_cols=288 Identities=25% Similarity=0.262 Sum_probs=202.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC---C-CCCceeccccccchhhhhhhhHHHHHHHhhhhhC-CcccCcc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR---G-ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH-GVKFSSV 117 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~---~-~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 117 (507)
+.+|+|||+|||+..||++++|...+-+|+|-. + ..||+....-. .+++ |++.
T Consensus 8 ~e~v~IiGSGPAa~tAAiYaaraelkPllfEG~~~~~i~pGGQLtTTT~-------------------veNfPGFPd--- 65 (322)
T KOG0404|consen 8 NENVVIIGSGPAAHTAAIYAARAELKPLLFEGMMANGIAPGGQLTTTTD-------------------VENFPGFPD--- 65 (322)
T ss_pred eeeEEEEccCchHHHHHHHHhhcccCceEEeeeeccCcCCCceeeeeec-------------------cccCCCCCc---
Confidence 348999999999999999999999999999962 1 23454322110 1111 1111
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCE--EEEEccCCceEEEEeCeEEEccCCCCC--CCCC
Q 010573 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSE--VSVDTIEGGNTVVKGKNIIIATGSDVK--SLPG 193 (507)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~--~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg 193 (507)
.+.- ..+.+.++++.++.|.+++..++..+|... ..+.++ .+.+.+|.+|+|||+... .+||
T Consensus 66 gi~G-----------~~l~d~mrkqs~r~Gt~i~tEtVskv~~sskpF~l~td---~~~v~~~avI~atGAsAkRl~~pg 131 (322)
T KOG0404|consen 66 GITG-----------PELMDKMRKQSERFGTEIITETVSKVDLSSKPFKLWTD---ARPVTADAVILATGASAKRLHLPG 131 (322)
T ss_pred cccc-----------HHHHHHHHHHHHhhcceeeeeehhhccccCCCeEEEec---CCceeeeeEEEecccceeeeecCC
Confidence 0111 223444566777889999999887766444 344432 267899999999998764 5666
Q ss_pred Ccc---CCceEecchhhc--cccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHH-HHHHHh
Q 010573 194 ITI---DEKRIVSSTGAL--ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQF-QRSLEK 267 (507)
Q Consensus 194 ~~~---~~~~~~~~~~~~--~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~-~~~l~~ 267 (507)
... ....+-.+.-+. .....+|..+|||||.+++|-|..|.+.+.+|++++|++++. .+..+ ++..+.
T Consensus 132 ~ge~~fWqrGiSaCAVCDGaapifrnk~laVIGGGDsA~EEA~fLtkyaskVyii~Rrd~fR------As~~Mq~ra~~n 205 (322)
T KOG0404|consen 132 EGEGEFWQRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEALFLTKYASKVYIIHRRDHFR------ASKIMQQRAEKN 205 (322)
T ss_pred CCcchHHhcccchhhcccCcchhhcCCeeEEEcCcHHHHHHHHHHHhhccEEEEEEEhhhhh------HHHHHHHHHhcC
Confidence 531 112222222222 222458999999999999999999999999999999998753 23333 344556
Q ss_pred cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCC-CCCC
Q 010573 268 QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-FATN 345 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~-~~t~ 345 (507)
.+|++++|+.+.+..++++.+. +.+.+..+|+...++++-+++++|..|++.++ +. .+++|.+|+|++-+. -.||
T Consensus 206 pnI~v~~nt~~~ea~gd~~~l~~l~ikn~~tge~~dl~v~GlFf~IGH~Pat~~l--~g-qve~d~~GYi~t~pgts~Ts 282 (322)
T KOG0404|consen 206 PNIEVLYNTVAVEALGDGKLLNGLRIKNVKTGEETDLPVSGLFFAIGHSPATKFL--KG-QVELDEDGYIVTRPGTSLTS 282 (322)
T ss_pred CCeEEEechhhhhhccCcccccceEEEecccCcccccccceeEEEecCCchhhHh--cC-ceeeccCceEEeccCccccc
Confidence 7999999999888876644332 66667777888899999999999999999984 44 699999999998854 6699
Q ss_pred CCCeEEecCCCCC-CCcHhHHHHHHHHHHHH
Q 010573 346 IPGVYAIGDVIPG-PMLAHKAEEDGVACVEF 375 (507)
Q Consensus 346 ~~~IyA~GD~a~~-~~~~~~A~~~g~~aa~~ 375 (507)
+|++||+||+... +..+..|...|-+||..
T Consensus 283 vpG~FAAGDVqD~kyRQAvTaAgsGciaald 313 (322)
T KOG0404|consen 283 VPGVFAAGDVQDKKYRQAVTAAGSGCIAALD 313 (322)
T ss_pred ccceeeccccchHHHHHHHhhhccchhhhhh
Confidence 9999999999843 33455555555555543
No 74
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=99.96 E-value=1.8e-26 Score=253.55 Aligned_cols=281 Identities=19% Similarity=0.209 Sum_probs=188.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
...+||+||||||||++||..|++.|++|+|||+++.+||+...... ++ +.
T Consensus 161 ~~~~dVvIIGaGPAGLaAA~~aar~G~~V~liD~~~~~GG~~~~~~~~~~---------------------g~------- 212 (985)
T TIGR01372 161 NAHCDVLVVGAGPAGLAAALAAARAGARVILVDEQPEAGGSLLSEAETID---------------------GK------- 212 (985)
T ss_pred cccCCEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCCCeeeccccccC---------------------Cc-------
Confidence 34689999999999999999999999999999999899997643210 00 00
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeE-EEEecCCEEE--EE-c--------c---CCceEEEEeCeEEEc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGY-GKFISPSEVS--VD-T--------I---EGGNTVVKGKNIIIA 183 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~~d~~~~~--v~-~--------~---~g~~~~~~~d~lvlA 183 (507)
+.. .+.....+.+... +++++.++ +..+..+... +. . . ......+.||+||||
T Consensus 213 ~~~-----------~~~~~~~~~l~~~~~v~v~~~t~V~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~i~a~~VILA 281 (985)
T TIGR01372 213 PAA-----------DWAAATVAELTAMPEVTLLPRTTAFGYYDHNTVGALERVTDHLDAPPKGVPRERLWRIRAKRVVLA 281 (985)
T ss_pred cHH-----------HHHHHHHHHHhcCCCcEEEcCCEEEEEecCCeEEEEEEeeeccccccCCccccceEEEEcCEEEEc
Confidence 000 0101112223333 57777653 3333322111 10 0 0 011236899999999
Q ss_pred cCCCCCCC--CCCccCCceEecchhhccc----c-CCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCccCCCCCH
Q 010573 184 TGSDVKSL--PGITIDEKRIVSSTGALAL----N-EVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADIVPSMDG 255 (507)
Q Consensus 184 tG~~p~~~--pg~~~~~~~~~~~~~~~~~----~-~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~~~~~d~ 255 (507)
||+.+..+ ||.. ...+++......+ . ..+++++|+|+|++++|+|..|.+.|. .|+++++.+.+
T Consensus 282 TGa~~r~~pipG~~--~pgV~~~~~~~~~l~~~~~~~gk~VvViG~G~~g~e~A~~L~~~G~~vV~vv~~~~~~------ 353 (985)
T TIGR01372 282 TGAHERPLVFANND--RPGVMLAGAARTYLNRYGVAPGKRIVVATNNDSAYRAAADLLAAGIAVVAIIDARADV------ 353 (985)
T ss_pred CCCCCcCCCCCCCC--CCCcEEchHHHHHHHhhCcCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEEccCcch------
Confidence 99988544 4543 3445554333221 1 237999999999999999999999995 57888766532
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccC--ceecCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIG--VETDKM 333 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~g--l~~~~~ 333 (507)
...+.+.+++.||++++++.++++..++....+++.. .+++++++++|.|+++.|++|++++ +..++ +..++.
T Consensus 354 --~~~l~~~L~~~GV~i~~~~~v~~i~g~~~v~~V~l~~-~~g~~~~i~~D~V~va~G~~Pnt~L--~~~lg~~~~~~~~ 428 (985)
T TIGR01372 354 --SPEARAEARELGIEVLTGHVVAATEGGKRVSGVAVAR-NGGAGQRLEADALAVSGGWTPVVHL--FSQRGGKLAWDAA 428 (985)
T ss_pred --hHHHHHHHHHcCCEEEcCCeEEEEecCCcEEEEEEEe-cCCceEEEECCEEEEcCCcCchhHH--HHhcCCCeeeccc
Confidence 3345677889999999999999997655433455542 1345678999999999999999986 34444 333322
Q ss_pred CCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 334 GRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 334 G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
..-.+ -.|++|+||+|||+++.. ....|..+|+.||..++
T Consensus 429 ~~~~~---~~t~v~gVyaaGD~~g~~-~~~~A~~eG~~Aa~~i~ 468 (985)
T TIGR01372 429 IAAFL---PGDAVQGCILAGAANGLF-GLAAALADGAAAGAAAA 468 (985)
T ss_pred cCcee---cCCCCCCeEEeeccCCcc-CHHHHHHHHHHHHHHHH
Confidence 11011 137899999999998665 56669999999998885
No 75
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=99.95 E-value=8.7e-27 Score=243.09 Aligned_cols=280 Identities=27% Similarity=0.361 Sum_probs=193.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
....+|+|||+||+|+++|..|++.|++|+++|+.+.+||...+ .+|...+..
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~--gip~~~~~~------------------------- 187 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRY--GIPAYRLPR------------------------- 187 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeee--cCCCccCCH-------------------------
Confidence 34578999999999999999999999999999999999986432 133211100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC---CCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK---SLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~---~~pg~~~~ 197 (507)
. +.....+.+.+.++++..+.....+. ... . ....||.|++|||+.+. .+++...
T Consensus 188 --~-----------~~~~~l~~~~~~Gv~~~~~~~~~~~~---~~~--~---~~~~~D~Vi~AtG~~~~~~~~i~g~~~- 245 (564)
T PRK12771 188 --E-----------VLDAEIQRILDLGVEVRLGVRVGEDI---TLE--Q---LEGEFDAVFVAIGAQLGKRLPIPGEDA- 245 (564)
T ss_pred --H-----------HHHHHHHHHHHCCCEEEeCCEECCcC---CHH--H---HHhhCCEEEEeeCCCCCCcCCCCCCcc-
Confidence 0 00111234456788776654321110 000 0 11258999999998753 3444322
Q ss_pred CceEecchhhcc------ccCCCCeEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCcc-CCCCCHHHHHHHHHHHHhcC
Q 010573 198 EKRIVSSTGALA------LNEVPKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI-VPSMDGEIRKQFQRSLEKQK 269 (507)
Q Consensus 198 ~~~~~~~~~~~~------~~~~~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~-~~~~d~~~~~~~~~~l~~~G 269 (507)
..+++..+++. ....+++++|+|+|.++++.+..+.+++ .+|+++.+.+.. ++..+.++. ...+.|
T Consensus 246 -~gv~~~~~~l~~~~~~~~~~~gk~v~ViGgg~~a~d~a~~a~~lga~~v~ii~r~~~~~~~~~~~~~~-----~a~~~G 319 (564)
T PRK12771 246 -AGVLDAVDFLRAVGEGEPPFLGKRVVVIGGGNTAMDAARTARRLGAEEVTIVYRRTREDMPAHDEEIE-----EALREG 319 (564)
T ss_pred -CCcEEHHHHHHHhhccCCcCCCCCEEEECChHHHHHHHHHHHHcCCCEEEEEEecCcccCCCCHHHHH-----HHHHcC
Confidence 22332222211 1234799999999999999999999998 679999887643 444333322 234679
Q ss_pred cEEEcCceEEEEEEcCCeE-EEE---Eee---cC-------CCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCC
Q 010573 270 MKFMLKTKVVGVDLSGDGV-KLT---LEP---AA-------GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335 (507)
Q Consensus 270 v~i~~~~~v~~i~~~~~~v-~v~---~~~---~~-------~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~ 335 (507)
|++++++.+.++..++++. .++ +.. .. .++..++++|.||+|+|..|+..++. +..++. +++|+
T Consensus 320 Vki~~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~g~~~~i~~D~Vi~A~G~~p~~~~~~-~~~gl~-~~~G~ 397 (564)
T PRK12771 320 VEINWLRTPVEIEGDENGATGLRVITVEKMELDEDGRPSPVTGEEETLEADLVVLAIGQDIDSAGLE-SVPGVE-VGRGV 397 (564)
T ss_pred CEEEecCCcEEEEcCCCCEEEEEEEEEEecccCCCCCeeecCCceEEEECCEEEECcCCCCchhhhh-hccCcc-cCCCC
Confidence 9999999999997654432 222 111 01 33456899999999999999987642 235677 77899
Q ss_pred eecCC-CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 336 IPVNE-RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 336 i~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
|.||+ +++|+.|+|||+||++.++.++..|+.+|+.||.+|.
T Consensus 398 i~vd~~~~~ts~~~Vfa~GD~~~g~~~v~~Av~~G~~aA~~i~ 440 (564)
T PRK12771 398 VQVDPNFMMTGRPGVFAGGDMVPGPRTVTTAIGHGKKAARNID 440 (564)
T ss_pred EEeCCCCccCCCCCEEeccCcCCCchHHHHHHHHHHHHHHHHH
Confidence 99998 6889999999999999888899999999999999984
No 76
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms]
Probab=99.95 E-value=1e-27 Score=222.46 Aligned_cols=324 Identities=20% Similarity=0.223 Sum_probs=227.3
Q ss_pred hCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCC-------ceEecchhhccccC---C
Q 010573 145 KNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDE-------KRIVSSTGALALNE---V 213 (507)
Q Consensus 145 ~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~-------~~~~~~~~~~~~~~---~ 213 (507)
.-||-++.| .+..+|.+...|.++|| .+|.||+++||||.+|..++-++... ..+.+..|+.+++. .
T Consensus 269 nGGvAvl~G~kvvkid~~d~~V~LnDG--~~I~YdkcLIATG~~Pk~l~~~~~A~~evk~kit~fr~p~DF~rlek~~ae 346 (659)
T KOG1346|consen 269 NGGVAVLRGRKVVKIDEEDKKVILNDG--TTIGYDKCLIATGVRPKKLQVFEEASEEVKQKITYFRYPADFKRLEKGLAE 346 (659)
T ss_pred cCceEEEeccceEEeecccCeEEecCC--cEeehhheeeecCcCcccchhhhhcCHHhhhheeEEecchHHHHHHHhhhh
Confidence 458999999 57889999999999999 89999999999999997665443221 14556777776653 3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhc----CCeeEEEcccCccC-CCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARL----GSEVTVVEFAADIV-PSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV 288 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~~-~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v 288 (507)
.++|.|||+|++|-|+|..|.+. |.+|+.+......+ .-+++.++++-.+.+++.||.++.+..|..+......+
T Consensus 347 k~siTIiGnGflgSELacsl~rk~r~~g~eV~QvF~Ek~nm~kiLPeyls~wt~ekir~~GV~V~pna~v~sv~~~~~nl 426 (659)
T KOG1346|consen 347 KQSITIIGNGFLGSELACSLKRKYRNEGVEVHQVFEEKYNMEKILPEYLSQWTIEKIRKGGVDVRPNAKVESVRKCCKNL 426 (659)
T ss_pred cceEEEEcCcchhhhHHHHHHHhhhccCcEEEEeecccCChhhhhHHHHHHHHHHHHHhcCceeccchhhhhhhhhccce
Confidence 58999999999999999998764 67887664433333 34567788888999999999999999999998888888
Q ss_pred EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCC-CCeecCCCCCCCCCCeEEecCCCCCC--------
Q 010573 289 KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKM-GRIPVNERFATNIPGVYAIGDVIPGP-------- 359 (507)
Q Consensus 289 ~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~-G~i~Vd~~~~t~~~~IyA~GD~a~~~-------- 359 (507)
.+.+. +|.++..|+|++|+|-.||+++ .+..|+++|++ |++.||..++.. .|||++||++...
T Consensus 427 ~lkL~-----dG~~l~tD~vVvavG~ePN~el--a~~sgLeiD~~lGGfrvnaeL~ar-~NvwvAGdaacF~D~~LGrRR 498 (659)
T KOG1346|consen 427 VLKLS-----DGSELRTDLVVVAVGEEPNSEL--AEASGLEIDEKLGGFRVNAELKAR-ENVWVAGDAACFEDGVLGRRR 498 (659)
T ss_pred EEEec-----CCCeeeeeeEEEEecCCCchhh--cccccceeecccCcEEeeheeecc-cceeeecchhhhhccccccee
Confidence 88886 7789999999999999999997 67788999875 889999999964 8999999999422
Q ss_pred -CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEc-CCCee--eecCCHHHHHHcCC-------------------CEE
Q 010573 360 -MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYT-HPEVA--SVGKTEEQVKELGV-------------------EYR 416 (507)
Q Consensus 360 -~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~-~~~~~--~vG~~~~~~~~~~~-------------------~~~ 416 (507)
..+..|.-.||.|++||.|...++... ..+++. .|++. .+|+-+..+..-|+ ++.
T Consensus 499 VehhdhavvSGRLAGENMtgAakpy~hq--smFWsdlgP~igyeaIGlvDSSLpTVgVfA~p~s~~~~~~~se~sdt~v~ 576 (659)
T KOG1346|consen 499 VEHHDHAVVSGRLAGENMTGAAKPYKHQ--SMFWSDLGPEIGYEAIGLVDSSLPTVGVFALPSSATRVDQLSESSDTDVP 576 (659)
T ss_pred ccccccceeeceecccccccccCCcccc--ceeeeccCcccccceeeecccCCCcceeeeccccccchhhhhhccCCCCc
Confidence 245678899999999998765432222 122221 13332 23333332221111 110
Q ss_pred EEEEecCcccc--------hhhc-C-CcceEEE-EEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcC
Q 010573 417 VGKFPFLANSR--------AKAI-D-DAEGIVK-ILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARV 482 (507)
Q Consensus 417 ~~~~~~~~~~~--------~~~~-~-~~~~~~k-~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~ 482 (507)
.....-+.... .... + +...|-| +||..+++.|+|..++.- -..|......|+.+...+||.+.
T Consensus 577 ~~s~s~s~ss~~~~~~s~~~v~~~P~e~~~ygKgViFYl~d~~iVGilLwN~--Fnr~~~AR~II~d~kk~ddlnEv 651 (659)
T KOG1346|consen 577 ETSTSSSQSSKSDAGASQDGVTCDPDEAGNYGKGVIFYLKDDKIVGILLWNL--FNRIGLARTIINDNKKYDDLNEV 651 (659)
T ss_pred cccccccccccccCCcCCCCCccCcccccccCceEEEEecCCcEEEEEehhh--hccchhhHHHhccccchhhHHHH
Confidence 00000000000 0000 1 1111222 444557999999988765 23567788899999999998764
No 77
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=99.94 E-value=1.5e-24 Score=218.72 Aligned_cols=313 Identities=16% Similarity=0.197 Sum_probs=190.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccch--------hhhhhhhHHHHHHHhhhhhCCc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPS--------KALLHSSHMYHEAMHSFASHGV 112 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~--------~~~~~~~~~~~~~~~~~~~~g~ 112 (507)
...++|+|||||+|||+||.+|++.|++|+++|+++.+||.|.+....+. .... ....|..+.....+.-+
T Consensus 8 ~~~~~VaIIGAG~aGL~aA~~l~~~G~~v~vfE~~~~vGG~W~~~~~~~~d~~~~~~~~~~~-~s~~Y~~L~tn~p~~~m 86 (461)
T PLN02172 8 INSQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDPLSLDPTRSIV-HSSVYESLRTNLPRECM 86 (461)
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhcCCeEEEEecCCCCcceeecCCCcCCCccccCCCCccc-chhhhhhhhccCCHhhc
Confidence 34579999999999999999999999999999999999999987543221 1000 01122222211111111
Q ss_pred ccCccccC--------hHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEe-EEEEec--CCEEEEEccCC--ceEEEEe
Q 010573 113 KFSSVEVD--------LPAMMAQKDKAVSNLTRGIEGLFKKNKVT--YVKG-YGKFIS--PSEVSVDTIEG--GNTVVKG 177 (507)
Q Consensus 113 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~~~~~d--~~~~~v~~~~g--~~~~~~~ 177 (507)
.+.+.... ....++. ...+.++++.+.+..++. +..+ ++..++ ...+.|.+.++ ...+..|
T Consensus 87 ~f~dfp~~~~~~~~~~~~~~fp~----~~ev~~YL~~~a~~fgl~~~I~~~t~V~~V~~~~~~w~V~~~~~~~~~~~~~~ 162 (461)
T PLN02172 87 GYRDFPFVPRFDDESRDSRRYPS----HREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQSKNSGGFSKDEIF 162 (461)
T ss_pred cCCCCCCCcccccccCcCCCCCC----HHHHHHHHHHHHHHcCCcceEEecCEEEEEeecCCeEEEEEEcCCCceEEEEc
Confidence 11110000 0001111 133445566667777776 4443 455554 34566665433 2345789
Q ss_pred CeEEEccC--CCCC--CCCCCc-cCCceEecchhhccc-cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC
Q 010573 178 KNIIIATG--SDVK--SLPGIT-IDEKRIVSSTGALAL-NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP 251 (507)
Q Consensus 178 d~lvlAtG--~~p~--~~pg~~-~~~~~~~~~~~~~~~-~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 251 (507)
|+||+||| +.|. .+||.. ..+..+++ .+.... ...+|+|+|||+|.+|+|+|..|.+.+.+|+++.|......
T Consensus 163 d~VIvAtG~~~~P~~P~ipG~~~f~G~~iHs-~~yr~~~~~~gk~VvVVG~G~Sg~diA~~L~~~a~~V~l~~r~~~~~~ 241 (461)
T PLN02172 163 DAVVVCNGHYTEPNVAHIPGIKSWPGKQIHS-HNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRASESDT 241 (461)
T ss_pred CEEEEeccCCCCCcCCCCCCcccCCceEEEe-cccCCccccCCCEEEEECCCcCHHHHHHHHHHhCCeEEEEEeeccccc
Confidence 99999999 5663 456664 33333333 333222 23589999999999999999999999999999998764311
Q ss_pred CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccC-cee
Q 010573 252 SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIG-VET 330 (507)
Q Consensus 252 ~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~g-l~~ 330 (507)
. ..+......+..+..|..+.. ++. +.+. +++.+++|.||+|||++|+.++| +..+ +..
T Consensus 242 ---------~-~~~~~~~~~v~~~~~I~~~~~-~g~--V~f~-----DG~~~~~D~Ii~~TGy~~~~pfL--~~~~~i~v 301 (461)
T PLN02172 242 ---------Y-EKLPVPQNNLWMHSEIDTAHE-DGS--IVFK-----NGKVVYADTIVHCTGYKYHFPFL--ETNGYMRI 301 (461)
T ss_pred ---------c-ccCcCCCCceEECCcccceec-CCe--EEEC-----CCCCccCCEEEECCcCCcccccc--Ccccceee
Confidence 0 011112334455666766643 233 5554 55678999999999999999984 3322 223
Q ss_pred cCCCCeecCCC-CCCC-CCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC
Q 010573 331 DKMGRIPVNER-FATN-IPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380 (507)
Q Consensus 331 ~~~G~i~Vd~~-~~t~-~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~ 380 (507)
+++.-..+-.+ +-.. .|+++.+|=..... ....+..|++.+|..+.|..
T Consensus 302 ~~~~v~~Ly~~~f~~~~~p~LafiG~~~~~~-~f~~~E~Qa~~~a~v~sG~~ 352 (461)
T PLN02172 302 DENRVEPLYKHVFPPALAPGLSFIGLPAMGI-QFVMFEIQSKWVAAVLSGRV 352 (461)
T ss_pred CCCcchhhHHhhcCCCCCCcEEEEecccccc-CchhHHHHHHHHHHHHcCCC
Confidence 22110011111 1123 48999999664332 34678899999999998763
No 78
>PF02852 Pyr_redox_dim: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; InterPro: IPR004099 This entry represents a dimerisation domain that is usually found at the C-terminal of both class I and class II oxidoreductases, as well as in NADH oxidases and peroxidases [, , ].; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0045454 cell redox homeostasis, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3II4_B 2A8X_A 2BC0_B 2BC1_B 2W0H_A 2X50_B 2JK6_A 2YAU_A 2EQ9_E 2EQ6_B ....
Probab=99.92 E-value=3.1e-24 Score=173.57 Aligned_cols=110 Identities=49% Similarity=0.767 Sum_probs=105.6
Q ss_pred ccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHH
Q 010573 388 VPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAV 467 (507)
Q Consensus 388 ~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~ 467 (507)
+|+++|++|++++||+||++|++.++++++.+.++....++.+.+++++|+|+++|+++++|||+|++|+++.|+|+.++
T Consensus 1 vP~~vft~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~t~~IlGa~~vg~~a~e~I~~~~ 80 (110)
T PF02852_consen 1 VPTVVFTDPEIASVGLTEEEARKQGIDYEVVTVPFKSNDRARYYPETEGFVKLIFDKKTGRILGAQIVGPNASELINELA 80 (110)
T ss_dssp CEEEEESSSEEEEEES-HHHHHHHTSGEEEEEEEEGGEHHHHHTTTTEEEEEEEEETTTTBEEEEEEEETTHHHHHHHHH
T ss_pred CCEEEECCCceEEEccCHHHHHhccCceeeeeecccccchhcccCCcceeeEEEEEeeccceeeeeeecCchHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 468 LAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 468 ~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
.+|++++|++++.+.+++|||++|++.++|
T Consensus 81 ~ai~~~~t~~~l~~~~~~~Pt~se~~~~a~ 110 (110)
T PF02852_consen 81 LAIQNGLTVEDLADDIFYHPTFSEAIQEAA 110 (110)
T ss_dssp HHHHTTSBHHHHHTSBSSSTSTGHHHHHHH
T ss_pred HHHHcCCCHHHHhCCeeeCCChhHHHHHhC
Confidence 999999999999999999999999999886
No 79
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
Probab=99.89 E-value=1.4e-22 Score=201.36 Aligned_cols=286 Identities=24% Similarity=0.286 Sum_probs=199.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
...+|.|||+||||++||..|++.|++|+++|+.+..||...+. ||...+.
T Consensus 122 tg~~VaviGaGPAGl~~a~~L~~~G~~Vtv~e~~~~~GGll~yG--IP~~kl~--------------------------- 172 (457)
T COG0493 122 TGKKVAVIGAGPAGLAAADDLSRAGHDVTVFERVALDGGLLLYG--IPDFKLP--------------------------- 172 (457)
T ss_pred CCCEEEEECCCchHhhhHHHHHhCCCeEEEeCCcCCCceeEEec--Cchhhcc---------------------------
Confidence 34799999999999999999999999999999999999964432 4432211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC---CCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK---SLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~---~~pg~~~~~ 198 (507)
.++.+...+.+++.|++|+.+...-.+ ++.+. ..-.||.+++|||+.-+ .+|+.+ .
T Consensus 173 -----------k~i~d~~i~~l~~~Gv~~~~~~~vG~~-----it~~~---L~~e~Dav~l~~G~~~~~~l~i~g~d--~ 231 (457)
T COG0493 173 -----------KDILDRRLELLERSGVEFKLNVRVGRD-----ITLEE---LLKEYDAVFLATGAGKPRPLDIPGED--A 231 (457)
T ss_pred -----------chHHHHHHHHHHHcCeEEEEcceECCc-----CCHHH---HHHhhCEEEEeccccCCCCCCCCCcC--C
Confidence 111222245677778888877543221 11111 22356999999997543 455543 3
Q ss_pred ceEecchhhcc------cc---------CCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCcc--CCCCCHHHHHH
Q 010573 199 KRIVSSTGALA------LN---------EVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI--VPSMDGEIRKQ 260 (507)
Q Consensus 199 ~~~~~~~~~~~------~~---------~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~--~~~~d~~~~~~ 260 (507)
..++...+++. +. ..+++++|||+|.++++++....+.|. +|+.+.+...- ...++......
T Consensus 232 ~gv~~A~dfL~~~~~~~~~~~~~~~~~~~~gk~vvVIGgG~Ta~D~~~t~~r~Ga~~v~~~~~~~~~~~~~~~~~~~~~~ 311 (457)
T COG0493 232 KGVAFALDFLTRLNKEVLGDFAEDRTPPAKGKRVVVIGGGDTAMDCAGTALRLGAKSVTCFYREDRDDETNEWPTWAAQL 311 (457)
T ss_pred CcchHHHHHHHHHHHHHhcccccccCCCCCCCeEEEECCCCCHHHHHHHHhhcCCeEEEEeccccccccCCcccccchhh
Confidence 34554444331 11 123999999999999999999999997 67777532221 12222223444
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcCC-eEE-EEEe---ec-------------CCCceEEEEcCEEEEeecCCCCCCCCC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSGD-GVK-LTLE---PA-------------AGGEKTILEADVVLVSAGRTPFTAGLG 322 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~-v~~~---~~-------------~~g~~~~i~~D~vi~a~G~~p~~~~l~ 322 (507)
..+....+|++..+.....++..+++ .+. +.+. .. ..|+...+++|.|+.++|+.|+.....
T Consensus 312 ~~~~a~eeg~~~~~~~~~~~~~~~e~GrV~~~~~~~~~~~~~~~~~~r~~p~~v~gs~~~~~aD~v~~aig~~~~~~~~~ 391 (457)
T COG0493 312 EVRSAGEEGVERLPFVQPKAFIGNEGGRVTGVKFGRVEPGEYVDGWGRRGPVGVIGTEKTDAADTVILAIGFEGDATDGL 391 (457)
T ss_pred hhhhhhhcCCcccccCCceeEeecCCCcEeeeecccccccCcccccccccCccccCceEEehHHHHHHHhccCCCccccc
Confidence 55666778999998888888877543 333 2221 11 024557899999999999999865432
Q ss_pred CcccCceecCCCCeecCCCC-CCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 323 LDKIGVETDKMGRIPVNERF-ATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 323 ~~~~gl~~~~~G~i~Vd~~~-~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
....++..+..|.+.+|+.+ +|+.|++||.||+..+..+...|+.+|+.+|+.|-
T Consensus 392 ~~~~~~~~~~~g~i~~~~~~~~ts~~~vfa~gD~~~g~~~vv~ai~eGr~aak~i~ 447 (457)
T COG0493 392 LLEFGLKLDKRGRIKVDENLQQTSIPGVFAGGDAVRGAALVVWAIAEGREAAKAID 447 (457)
T ss_pred ccccccccCCCCceecccccccccCCCeeeCceeccchhhhhhHHhhchHHHHhhh
Confidence 23336788889999999998 89999999999999888899999999999998774
No 80
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=99.89 E-value=6.3e-22 Score=202.11 Aligned_cols=309 Identities=19% Similarity=0.223 Sum_probs=155.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccc--------cchhhhhhhhHHHHHHHhhhhhCCcccC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGC--------IPSKALLHSSHMYHEAMHSFASHGVKFS 115 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~--------~p~~~~~~~~~~~~~~~~~~~~~g~~~~ 115 (507)
.+|+|||||++||++|..|.+.|++++++|+++.+||.|.+... +++-....+.. ...+..+.++.+
T Consensus 2 krVaVIGaG~sGL~a~k~l~e~g~~~~~fE~~~~iGG~W~~~~~~~~g~~~~y~sl~~n~sk~-----~~~fsdfp~p~~ 76 (531)
T PF00743_consen 2 KRVAVIGAGPSGLAAAKNLLEEGLEVTCFEKSDDIGGLWRYTENPEDGRSSVYDSLHTNTSKE-----MMAFSDFPFPED 76 (531)
T ss_dssp -EEEEE--SHHHHHHHHHHHHTT-EEEEEESSSSSSGGGCHSTTCCCSEGGGSTT-B-SS-GG-----GSCCTTS-HCCC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCeEEecCCCCCccCeeCCcCCCCccccccceEEeeCch-----HhcCCCcCCCCC
Confidence 47999999999999999999999999999999999999975321 11110000000 000111211111
Q ss_pred ccc-cChHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEe-EEE---EecC----CEEEEEcc-CCceEEEEeCeEEEc
Q 010573 116 SVE-VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVT--YVKG-YGK---FISP----SEVSVDTI-EGGNTVVKGKNIIIA 183 (507)
Q Consensus 116 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~~~---~~d~----~~~~v~~~-~g~~~~~~~d~lvlA 183 (507)
... ... .++.++++...+..++. +..+ ++. ..+. ..+.|.+. +|+..+..||+||+|
T Consensus 77 ~p~f~~~-----------~~v~~Yl~~Ya~~f~L~~~I~fnt~V~~v~~~~d~~~~~~W~V~~~~~g~~~~~~fD~Vvva 145 (531)
T PF00743_consen 77 YPDFPSH-----------SEVLEYLESYAEHFGLRKHIRFNTEVVSVERDPDFSATGKWEVTTENDGKEETEEFDAVVVA 145 (531)
T ss_dssp CSSSEBH-----------HHHHHHHHHHHHHTTGGGGEETSEEEEEEEEETTTT-ETEEEEEETTTTEEEEEEECEEEEE
T ss_pred CCCCCCH-----------HHHHHHHHHHHhhhCCcceEEEccEEeEeeeccccCCCceEEEEeecCCeEEEEEeCeEEEc
Confidence 111 111 12223333334433332 2222 222 2221 35666654 454566789999999
Q ss_pred cCCC--CC----CCCCCccCCceEecchhhcccc-CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCCC-
Q 010573 184 TGSD--VK----SLPGITIDEKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMD- 254 (507)
Q Consensus 184 tG~~--p~----~~pg~~~~~~~~~~~~~~~~~~-~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~d- 254 (507)
||.. |. .+||++.....++++.+..... ..+|+|+|||+|.+|+|+|..+++...+|++..|+..+ ++...
T Consensus 146 tG~~~~P~~P~~~~~G~e~F~G~i~HS~~yr~~~~f~gKrVlVVG~g~Sg~DIa~el~~~a~~v~~s~R~~~wv~pr~~~ 225 (531)
T PF00743_consen 146 TGHFSKPNIPEPSFPGLEKFKGEIIHSKDYRDPEPFKGKRVLVVGGGNSGADIAVELSRVAKKVYLSTRRGAWVLPRYWD 225 (531)
T ss_dssp E-SSSCESB-----CTGGGHCSEEEEGGG--TGGGGTTSEEEEESSSHHHHHHHHHHTTTSCCEEEECC-----------
T ss_pred CCCcCCCCCChhhhhhhhcCCeeEEccccCcChhhcCCCEEEEEeCCHhHHHHHHHHHHhcCCeEEEEeccccccccccc
Confidence 9953 42 2577663334566666655433 45899999999999999999999999999999887665 33211
Q ss_pred ----------------------HHHHHHH-HHHHHh------cCcEEE------------------------cCceEEEE
Q 010573 255 ----------------------GEIRKQF-QRSLEK------QKMKFM------------------------LKTKVVGV 281 (507)
Q Consensus 255 ----------------------~~~~~~~-~~~l~~------~Gv~i~------------------------~~~~v~~i 281 (507)
..+.+.+ .+.+.+ .|..-. ....|.++
T Consensus 226 ~G~P~D~~~~~R~~~~l~~~lp~~~~~~~~~~~l~~~~~~~~~gl~p~~~~~~~~~~ind~l~~~i~~G~i~vk~~I~~~ 305 (531)
T PF00743_consen 226 NGYPFDMVFSTRFSSFLQKNLPESLSNWLLEKKLNKRFDHENYGLKPKHRFFSQHPTINDELPNRIRSGRIKVKPDIKRF 305 (531)
T ss_dssp -------------------------------------------------------------------------EE-EEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0011111 011100 011000 00111122
Q ss_pred EEcCCeEEEEEeecCCCceEEE-EcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCC---CCCCCeEEecCCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA---TNIPGVYAIGDVIP 357 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i-~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~---t~~~~IyA~GD~a~ 357 (507)
++++ +.++ +++++ ++|.||+|||++...++|. +.-+...+ +.+..-.++= -..|++..+|=+..
T Consensus 306 --~~~~--v~F~-----DGs~~e~vD~II~~TGY~~~fpFL~--~~~~~~~~-~~~~LYk~vfp~~~~~ptLafIG~~~~ 373 (531)
T PF00743_consen 306 --TENS--VIFE-----DGSTEEDVDVIIFCTGYKFSFPFLD--ESLIKVDD-NRVRLYKHVFPPNLDHPTLAFIGLVQP 373 (531)
T ss_dssp ---SSE--EEET-----TSEEEEE-SEEEE---EE---TTB---TTTT-S-S-SSSSEETTTEETETTSTTEEESS-SBS
T ss_pred --cccc--cccc-----ccccccccccccccccccccccccc--cccccccc-ccccccccccccccccccccccccccc
Confidence 1122 2233 55664 6999999999999988853 32233222 3333333321 23589999998753
Q ss_pred CCCcHhHHHHHHHHHHHHHcCCC
Q 010573 358 GPMLAHKAEEDGVACVEFLAGKH 380 (507)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~~ 380 (507)
.......+..|++.+|+-+.|..
T Consensus 374 ~g~~fp~~ElQArw~a~v~sG~~ 396 (531)
T PF00743_consen 374 FGSIFPIFELQARWAARVFSGRV 396 (531)
T ss_dssp SS-HHHHHHHHHHHHHHHHTTSS
T ss_pred ccccccccccccccccccccccc
Confidence 32345678999999999998763
No 81
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Probab=99.85 E-value=1.3e-19 Score=190.52 Aligned_cols=287 Identities=14% Similarity=0.146 Sum_probs=168.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhh---hCCcccCc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFA---SHGVKFSS 116 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~g~~~~~ 116 (507)
..+.++|+||||||||++||++|++.|++|+|+|+.+..|+..... +.+ ...+.+.++..+.. -.|+....
T Consensus 380 ~~tgKKVaVVGaGPAGLsAA~~La~~Gh~Vtv~E~~~i~gl~~~~~-----~~i-~~~~~~~~~L~er~p~~~GG~~~yG 453 (1028)
T PRK06567 380 EPTNYNILVTGLGPAGFSLSYYLLRSGHNVTAIDGLKITLLPFDVH-----KPI-KFWHEYKNLLSERMPRGFGGVAEYG 453 (1028)
T ss_pred CCCCCeEEEECcCHHHHHHHHHHHhCCCeEEEEccccccccccccc-----ccc-chhhhhccchhhhccccCCcccccC
Confidence 3467899999999999999999999999999999966555432110 000 11112222221111 11222222
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCC-CCC--CCC
Q 010573 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGS-DVK--SLP 192 (507)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~-~p~--~~p 192 (507)
..+.|.+- .+ ..+...++. .++.++.+..... .++.++ .....||+|+||||+ .|+ .+|
T Consensus 454 Ip~R~~k~------~l----~~i~~il~~g~~v~~~~gv~lG~-----dit~ed--l~~~gyDAV~IATGA~kpr~L~IP 516 (1028)
T PRK06567 454 ITVRWDKN------NL----DILRLILERNNNFKYYDGVALDF-----NITKEQ--AFDLGFDHIAFCIGAGQPKVLDIE 516 (1028)
T ss_pred ccccchHH------HH----HHHHHHHhcCCceEEECCeEECc-----cCCHHH--HhhcCCCEEEEeCCCCCCCCCCCC
Confidence 22333211 11 111122222 2455554533111 111111 134579999999999 565 345
Q ss_pred CCccCCceEecchhhcccc--------------CCCCeEEEEcCcHHHHHHHHHHHh-----------------------
Q 010573 193 GITIDEKRIVSSTGALALN--------------EVPKKLVVIGAGYIGLEMGSVWAR----------------------- 235 (507)
Q Consensus 193 g~~~~~~~~~~~~~~~~~~--------------~~~~~vvVvG~G~~g~e~A~~l~~----------------------- 235 (507)
|. +...+++..+++... ..+++|+|||||.+|+|+|....+
T Consensus 517 Ge--da~GV~sA~DfL~~l~~~~~~~~~~~~~~~~Gk~VVVIGGGnTAmD~ArtAlr~~~l~ve~~l~~~~~~~~~~~d~ 594 (1028)
T PRK06567 517 NF--EAKGVKTASDFLMTLQSGGAFLKNSNTNMVIRMPIAVIGGGLTSLDAATESLYYYKKQVEEFAKDYIEKDLTEEDK 594 (1028)
T ss_pred Cc--cCCCeEEHHHHHHHHhhcccccccccCcccCCCCEEEEcCcHHHHHHHHHHHhhccchhhHHHHhhhhhhcccccH
Confidence 53 356677777654321 135899999999999999984332
Q ss_pred ----------------------------cCCeeEEEcccCcc-CCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcC-
Q 010573 236 ----------------------------LGSEVTVVEFAADI-VPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG- 285 (507)
Q Consensus 236 ----------------------------~g~~Vtlv~~~~~~-~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~- 285 (507)
.| .|+++.|+..- +|...-+ .+.+... .+.||+++++....++..++
T Consensus 595 eia~~f~~h~r~~g~~~~~~~v~~l~~~~G-~VtIvYRr~~~empA~~~~-~eEv~~A-~eEGV~f~~~~~P~~i~~d~~ 671 (1028)
T PRK06567 595 EIAEEFIAHAKLFKEAKNNEELRKVFNKLG-GATVYYRGRLQDSPAYKLN-HEELIYA-LALGVDFKENMQPLRINVDKY 671 (1028)
T ss_pred HHHHHHHHHHHhhcchhccchhhhhhccCC-ceEEEecCChhhCCCCCCC-HHHHHHH-HHcCcEEEecCCcEEEEecCC
Confidence 22 28888877654 5532100 1223333 35799999999999997654
Q ss_pred CeEE-EEEeecC-----------C-C-------------ceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecC
Q 010573 286 DGVK-LTLEPAA-----------G-G-------------EKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVN 339 (507)
Q Consensus 286 ~~v~-v~~~~~~-----------~-g-------------~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd 339 (507)
+.+. +++.... + + ...+++||.||+|+|..||+... . .+
T Consensus 672 g~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vi~A~G~~~~~~~~--~-------------~~ 736 (1028)
T PRK06567 672 GHVESVEFENRNRHCEQSKTAWQSHEFGLTRLPRQCYAFPRNDIKTKTVIMAIGIENNTQFD--E-------------DK 736 (1028)
T ss_pred CeEEEEEEEEEecccccccccccccccccCCcCcccCCCccccccCCEEEEecccCCccccc--c-------------cc
Confidence 3333 4443211 1 1 33679999999999999999852 0 01
Q ss_pred CCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 340 ERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 340 ~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
..+-++.+++|+- .+..|+.+|+.++.+|.
T Consensus 737 ~s~~~d~~~~f~G--------tvv~A~as~k~~~~~i~ 766 (1028)
T PRK06567 737 YSYFGDCNPKYSG--------SVVKALASSKEGYDAIN 766 (1028)
T ss_pred cccccCCCCcccc--------HHHHHHHHHHhHHHHHH
Confidence 1222455667765 67889999999999983
No 82
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.1e-20 Score=193.43 Aligned_cols=280 Identities=22% Similarity=0.301 Sum_probs=175.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+-++|.|||+||||++||-+|-+.|+.|+++||.++.||...+ .+|.. .+|
T Consensus 1784 tg~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~y--gipnm--------------------------kld- 1834 (2142)
T KOG0399|consen 1784 TGKRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMY--GIPNM--------------------------KLD- 1834 (2142)
T ss_pred cCcEEEEEccCchhhhHHHHHhhcCcEEEEEEecCCcCceeee--cCCcc--------------------------chh-
Confidence 4579999999999999999999999999999999999995322 12211 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CCCCCCCccCCce
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VKSLPGITIDEKR 200 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~~~pg~~~~~~~ 200 (507)
+. +.+.--+++.+.||+|+.+...-.+ +.++ + ..-.+|.+|+|+|+. |+.+|....+...
T Consensus 1835 -k~----------vv~rrv~ll~~egi~f~tn~eigk~-----vs~d-~--l~~~~daiv~a~gst~prdlpv~grd~kg 1895 (2142)
T KOG0399|consen 1835 -KF----------VVQRRVDLLEQEGIRFVTNTEIGKH-----VSLD-E--LKKENDAIVLATGSTTPRDLPVPGRDLKG 1895 (2142)
T ss_pred -HH----------HHHHHHHHHHhhCceEEeecccccc-----ccHH-H--HhhccCeEEEEeCCCCCcCCCCCCccccc
Confidence 00 1111135667789998876533211 2221 1 334689999999986 4444433222322
Q ss_pred Eecchh---------------hccccCCCCeEEEEcCcHHHHHHHHHHHhcCCe-eEEEcccCc---------cCCCCCH
Q 010573 201 IVSSTG---------------ALALNEVPKKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAAD---------IVPSMDG 255 (507)
Q Consensus 201 ~~~~~~---------------~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~---------~~~~~d~ 255 (507)
++-..+ ...+...+|+|+|||||.+|-++...-.|+|++ |.-++--|+ ++|.++.
T Consensus 1896 v~fame~l~~ntk~lld~~~d~~~~~~~gkkvivigggdtg~dcigtsvrhg~~sv~n~ellp~pp~~ra~~npwpqwpr 1975 (2142)
T KOG0399|consen 1896 VHFAMEFLEKNTKSLLDSVLDGNYISAKGKKVIVIGGGDTGTDCIGTSVRHGCKSVGNFELLPQPPPERAPDNPWPQWPR 1975 (2142)
T ss_pred cHHHHHHHHHhHHhhhccccccceeccCCCeEEEECCCCccccccccchhhccceecceeecCCCCcccCCCCCCccCce
Confidence 222111 122334589999999999999999999999975 332322221 1232221
Q ss_pred ----HH-HHHHHHHHHhcCcEEEcC------------ceEE-----EE--EEcCCeEE--EEEeecCCCceEEEEcCEEE
Q 010573 256 ----EI-RKQFQRSLEKQKMKFMLK------------TKVV-----GV--DLSGDGVK--LTLEPAAGGEKTILEADVVL 309 (507)
Q Consensus 256 ----~~-~~~~~~~l~~~Gv~i~~~------------~~v~-----~i--~~~~~~v~--v~~~~~~~g~~~~i~~D~vi 309 (507)
+. .+.+.+. .|-..++. ..|+ ++ +.++.+.. .++ .++.+.++||+|+
T Consensus 1976 vfrvdygh~e~~~~---~g~dpr~y~vltk~f~~~~~g~v~gl~~vrvew~k~~~g~w~~~ei----~~see~~eadlv~ 2048 (2142)
T KOG0399|consen 1976 VFRVDYGHAEAKEH---YGSDPRTYSVLTKRFIGDDNGNVTGLETVRVEWEKDDKGRWQMKEI----NNSEEIIEADLVI 2048 (2142)
T ss_pred EEEeecchHHHHHH---hCCCcceeeeeeeeeeccCCCceeeEEEEEEEEEecCCCceEEEEc----CCcceeeecceee
Confidence 00 0111111 12111111 1111 11 11222211 111 2356789999999
Q ss_pred EeecCCCCCCCCCCcccCceecCCCCeec-CCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 310 VSAGRTPFTAGLGLDKIGVETDKMGRIPV-NERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 310 ~a~G~~p~~~~l~~~~~gl~~~~~G~i~V-d~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
+|.|+...-... .++.+++.|.++.|.. ++.+.|+++++||+|||-.+..+..+|+++||.+|+.+-
T Consensus 2049 lamgf~gpe~~~-~~~~~~~~d~rsni~t~~~~y~t~v~~vfaagdcrrgqslvvwai~egrq~a~~vd 2116 (2142)
T KOG0399|consen 2049 LAMGFVGPEKSV-IEQLNLKTDPRSNILTPKDSYSTDVAKVFAAGDCRRGQSLVVWAIQEGRQAARQVD 2116 (2142)
T ss_pred eeccccCcchhh-hhhcCcccCccccccCCCccccccccceeecccccCCceEEEEEehhhhHHHHHHH
Confidence 999988655443 6778899999888875 455889999999999999888899999999999998763
No 83
>KOG2755 consensus Oxidoreductase [General function prediction only]
Probab=99.83 E-value=1e-19 Score=159.76 Aligned_cols=264 Identities=21% Similarity=0.259 Sum_probs=165.7
Q ss_pred cEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 45 DVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+.+|||||+||.+||.+|+.+ ..+|+|+...+. ..+...|......++++.+... +-.
T Consensus 1 kfivvgggiagvscaeqla~~~psa~illitass~----------------vksvtn~~~i~~ylekfdv~eq----~~~ 60 (334)
T KOG2755|consen 1 KFIVVGGGIAGVSCAEQLAQLEPSAEILLITASSF----------------VKSVTNYQKIGQYLEKFDVKEQ----NCH 60 (334)
T ss_pred CeEEEcCccccccHHHHHHhhCCCCcEEEEeccHH----------------HHHHhhHHHHHHHHHhcCcccc----chh
Confidence 368999999999999999987 468999977321 1344455556666666655432 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC-CCCCCccCCceE
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK-SLPGITIDEKRI 201 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~-~~pg~~~~~~~~ 201 (507)
.+.+...+++++ +..++.....+.+++| ..+.|++|+++||++|. ...+. ...+
T Consensus 61 elg~~f~~~~~~--------------------v~~~~s~ehci~t~~g--~~~ky~kKOG~tg~kPklq~E~~---n~~I 115 (334)
T KOG2755|consen 61 ELGPDFRRFLND--------------------VVTWDSSEHCIHTQNG--EKLKYFKLCLCTGYKPKLQVEGI---NPKI 115 (334)
T ss_pred hhcccHHHHHHh--------------------hhhhccccceEEecCC--ceeeEEEEEEecCCCcceeecCC---CceE
Confidence 333332222211 1123445566777888 88999999999999995 33432 2223
Q ss_pred e---cchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-CCCCHHHHHHHHHHHHhc------
Q 010573 202 V---SSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-PSMDGEIRKQFQRSLEKQ------ 268 (507)
Q Consensus 202 ~---~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~~d~~~~~~~~~~l~~~------ 268 (507)
. ..+....+. ...|.|.|+|.|-+++|++..+. +..|+|....+.+. ..+||.+...+...|+..
T Consensus 116 v~irDtDsaQllq~kl~kaK~VlilgnGgia~El~yElk--~~nv~w~ikd~~IsaTFfdpGaaef~~i~l~a~~s~~~i 193 (334)
T KOG2755|consen 116 VGIRDTDSAQLLQCKLVKAKIVLILGNGGIAMELTYELK--ILNVTWKIKDEGISATFFDPGAAEFYDINLRADRSTRII 193 (334)
T ss_pred EEEecCcHHHHHHHHHhhcceEEEEecCchhHHHHHHhh--cceeEEEecchhhhhcccCccHHHHhHhhhhcccccchh
Confidence 3 233332222 34899999999999999998885 45788887777763 366777776666555211
Q ss_pred ------CcEEEcCce-----------------EEE------------------EEEcCCeEEEEEeecCCCceEEEEcCE
Q 010573 269 ------KMKFMLKTK-----------------VVG------------------VDLSGDGVKLTLEPAAGGEKTILEADV 307 (507)
Q Consensus 269 ------Gv~i~~~~~-----------------v~~------------------i~~~~~~v~v~~~~~~~g~~~~i~~D~ 307 (507)
.++.+.++. ... +....+...++..+...+....+.+|.
T Consensus 194 aiKh~q~iea~pk~~~n~vg~algpDw~s~~dl~g~~eseer~l~~l~~~~~~~~d~~d~~sv~~~~~ek~~~~qlt~d~ 273 (334)
T KOG2755|consen 194 AIKHFQYIEAFPKCEENNVGPALGPDWHSQIDLQGISESENRSLTYLRNCVITSTDTSDNLSVHYMDKEKMADNQLTCDF 273 (334)
T ss_pred hhhhhhhhhhcCcccccCcccccCcchhhhcccccchhhhhhhhHHhhhheeeeccchhhcccccccccccccceeeeeE
Confidence 111111100 000 000000001111111122334677999
Q ss_pred EEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 308 VLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 308 vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
++.|+|..||+++. -...+...++|+++||+.|+|+.|++||+||++.
T Consensus 274 ivSatgvtpn~e~~--~~~~lq~~edggikvdd~m~tslpdvFa~gDvct 321 (334)
T KOG2755|consen 274 IVSATGVTPNSEWA--MNKMLQITEDGGIKVDDAMETSLPDVFAAGDVCT 321 (334)
T ss_pred EEeccccCcCceEE--ecChhhhccccCeeehhhccccccceeeecceec
Confidence 99999999999953 3334777788999999999999999999999984
No 84
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B.
Probab=99.82 E-value=1.9e-19 Score=174.58 Aligned_cols=267 Identities=21% Similarity=0.278 Sum_probs=137.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCC---ceec-----cccccchhhhhhhhHHHHHHHhhhhhCCcc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALG---GTCL-----NVGCIPSKALLHSSHMYHEAMHSFASHGVK 113 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~G---G~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~ 113 (507)
.||+++||.||++|+.|..|.+.+ .++..+|+++.+. |+.+ ....+-...-+..+.....+.+++...+-.
T Consensus 2 ~~D~igIG~GP~nLslA~~l~~~~~~~~~f~e~~~~f~Wh~gmll~~~~~q~~fl~Dlvt~~~P~s~~sflnYL~~~~rl 81 (341)
T PF13434_consen 2 IYDLIGIGFGPFNLSLAALLEEHGDLKALFLERRPSFSWHPGMLLPGARMQVSFLKDLVTLRDPTSPFSFLNYLHEHGRL 81 (341)
T ss_dssp EESEEEE--SHHHHHHHHHHHHHH---EEEEES-SS--TTGGG--SS-B-SS-TTSSSSTTT-TTSTTSHHHHHHHTT-H
T ss_pred ceeEEEEeeCHHHHHHHHHhhhcCCCCEEEEecCCCCCcCCccCCCCCccccccccccCcCcCCCCcccHHHHHHHcCCh
Confidence 489999999999999999999885 8999999876542 2211 111100000001111111122222222211
Q ss_pred cCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec---C---CEEEEEc--cCCceEEEEeCeEEEcc
Q 010573 114 FSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS---P---SEVSVDT--IEGGNTVVKGKNIIIAT 184 (507)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d---~---~~~~v~~--~~g~~~~~~~d~lvlAt 184 (507)
..- ++.. ........+.+++....++..-.+..+ ++..+. . ..+.|.+ .+|+...+.++.|||||
T Consensus 82 ~~f--~~~~----~~~p~R~ef~dYl~Wva~~~~~~v~~~~~V~~I~~~~~~~~~~~~V~~~~~~g~~~~~~ar~vVla~ 155 (341)
T PF13434_consen 82 YEF--YNRG----YFFPSRREFNDYLRWVAEQLDNQVRYGSEVTSIEPDDDGDEDLFRVTTRDSDGDGETYRARNVVLAT 155 (341)
T ss_dssp HHH--HHH------SS-BHHHHHHHHHHHHCCGTTTEEESEEEEEEEEEEETTEEEEEEEEEETTS-EEEEEESEEEE--
T ss_pred hhh--hhcC----CCCCCHHHHHHHHHHHHHhCCCceEECCEEEEEEEecCCCccEEEEEEeecCCCeeEEEeCeEEECc
Confidence 000 0000 000001122222222233333223333 344332 1 1356655 34556899999999999
Q ss_pred CCCCCCCCCCc-cC-CceEecchhhccc---cCCCCeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCccCCC-----
Q 010573 185 GSDVKSLPGIT-ID-EKRIVSSTGALAL---NEVPKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIVPS----- 252 (507)
Q Consensus 185 G~~p~~~pg~~-~~-~~~~~~~~~~~~~---~~~~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~~~----- 252 (507)
|..|..|+... .. ...++++.+.... ...+++|+|||||.+|.|++..|.+.+. +|+++.|++.+.+.
T Consensus 156 G~~P~iP~~~~~~~~~~~v~Hss~~~~~~~~~~~~~~V~VVGgGQSAAEi~~~L~~~~~~~~V~~i~R~~~~~~~d~s~f 235 (341)
T PF13434_consen 156 GGQPRIPEWFQDLPGSPRVFHSSEYLSRIDQSLAGKRVAVVGGGQSAAEIFLDLLRRGPEAKVTWISRSPGFFPMDDSPF 235 (341)
T ss_dssp --EE---GGGGGGTT-TTEEEGGGHHHHHT-----EEEEEE-SSHHHHHHHHHHHHH-TTEEEEEEESSSS-EB----CC
T ss_pred CCCCCCCcchhhcCCCCCEEEehHhhhccccccCCCeEEEECCcHhHHHHHHHHHhCCCCcEEEEEECCCccCCCccccc
Confidence 98886554444 22 2567766665543 3458999999999999999999998875 89999998876432
Q ss_pred ----CCHH-------------------------------HHHHHHH-----HH-HhcCcEEEcCceEEEEEEcC-CeEEE
Q 010573 253 ----MDGE-------------------------------IRKQFQR-----SL-EKQKMKFMLKTKVVGVDLSG-DGVKL 290 (507)
Q Consensus 253 ----~d~~-------------------------------~~~~~~~-----~l-~~~Gv~i~~~~~v~~i~~~~-~~v~v 290 (507)
++|+ +.+.+-+ .+ .+..+.++.+++|+.++..+ +++.+
T Consensus 236 ~ne~f~P~~v~~f~~l~~~~R~~~l~~~~~~ny~~i~~~~l~~iy~~lY~~~v~g~~~~~l~~~~~v~~~~~~~~~~~~l 315 (341)
T PF13434_consen 236 VNEIFSPEYVDYFYSLPDEERRELLREQRHTNYGGIDPDLLEAIYDRLYEQRVSGRGRLRLLPNTEVTSAEQDGDGGVRL 315 (341)
T ss_dssp HHGGGSHHHHHHHHTS-HHHHHHHHHHTGGGTSSEB-HHHHHHHHHHHHHHHHHT---SEEETTEEEEEEEEES-SSEEE
T ss_pred hhhhcCchhhhhhhcCCHHHHHHHHHHhHhhcCCCCCHHHHHHHHHHHHHHHhcCCCCeEEeCCCEEEEEEECCCCEEEE
Confidence 2222 1111111 11 23357899999999998887 48999
Q ss_pred EEeecCCCceEEEEcCEEEEeecCC
Q 010573 291 TLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 291 ~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
++.+...+...++++|.||+|||++
T Consensus 316 ~~~~~~~~~~~~~~~D~VilATGy~ 340 (341)
T PF13434_consen 316 TLRHRQTGEEETLEVDAVILATGYR 340 (341)
T ss_dssp EEEETTT--EEEEEESEEEE---EE
T ss_pred EEEECCCCCeEEEecCEEEEcCCcc
Confidence 9988777788899999999999985
No 85
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=99.82 E-value=7.1e-20 Score=166.26 Aligned_cols=187 Identities=35% Similarity=0.488 Sum_probs=120.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHHH
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAM 124 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 124 (507)
||+||||||||++||.+|++.+.+|+|+|+.+.. +....|++...+............ .
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~~~v~ii~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~----------------- 59 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPGAKVLIIEKSPGT---PYNSGCIPSPLLVEIAPHRHEFLP-A----------------- 59 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEESSSSHH---HHHHSHHHHHHHHHHHHHHHHHHH-H-----------------
T ss_pred CEEEEecHHHHHHHHHHHhcCCCeEEEEeccccc---cccccccccccccccccccccccc-c-----------------
Confidence 7999999999999999999999999999874321 222233333222111111110000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEE-eEEEEecCCEE-------EEE-ccCCceEEEEeCeEEEccCCCCC--CCCC
Q 010573 125 MAQKDKAVSNLTRGIEGLFKKNKVTYVK-GYGKFISPSEV-------SVD-TIEGGNTVVKGKNIIIATGSDVK--SLPG 193 (507)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~d~~~~-------~v~-~~~g~~~~~~~d~lvlAtG~~p~--~~pg 193 (507)
+ + ..+.+.+...++++.. ..+..++.... .+. ...++...+.||+||||||+.|. .+|+
T Consensus 60 --------~-~-~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i~g 129 (201)
T PF07992_consen 60 --------R-L-FKLVDQLKNRGVEIRLNAKVVSIDPESKRVVCPAVTIQVVETGDGREIKYDYLVIATGSRPRTPNIPG 129 (201)
T ss_dssp --------H-H-GHHHHHHHHHTHEEEHHHTEEEEEESTTEEEETCEEEEEEETTTEEEEEEEEEEEESTEEEEEESSTT
T ss_pred --------c-c-cccccccccceEEEeeccccccccccccccccCcccceeeccCCceEecCCeeeecCccccceeecCC
Confidence 0 0 0112233455777743 34444432222 221 12334589999999999999874 5676
Q ss_pred Cc--cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcE
Q 010573 194 IT--IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 194 ~~--~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
.+ .....+.++.++......+++++|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG-------------------------------------------------- 159 (201)
T PF07992_consen 130 EEVAYFLRGVDDAQRFLELLESPKRVAVVG-------------------------------------------------- 159 (201)
T ss_dssp TTTECBTTSEEHHHHHHTHSSTTSEEEEES--------------------------------------------------
T ss_pred Cccccccccccccccccccccccccccccc--------------------------------------------------
Confidence 52 22245667777777666677999999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
+..+. +..+++++++|++.||+++||+.|||||
T Consensus 160 ----------------------------------------------~~~l~-~~~~~~~~~~g~i~vd~~~~t~~~~Iya 192 (201)
T PF07992_consen 160 ----------------------------------------------TEFLA-EKLGVELDENGFIKVDENLQTSVPGIYA 192 (201)
T ss_dssp ----------------------------------------------TTTST-HHTTSTBTTTSSBEEBTTSBBSSTTEEE
T ss_pred ----------------------------------------------ccccc-cccccccccccccccccccccccccccc
Confidence 44432 7778999999999999999999999999
Q ss_pred ecCCCCCC
Q 010573 352 IGDVIPGP 359 (507)
Q Consensus 352 ~GD~a~~~ 359 (507)
+|||++.+
T Consensus 193 ~GD~a~~~ 200 (201)
T PF07992_consen 193 AGDCAGIY 200 (201)
T ss_dssp -GGGBEES
T ss_pred cccccccC
Confidence 99998643
No 86
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=1e-17 Score=157.51 Aligned_cols=329 Identities=19% Similarity=0.279 Sum_probs=201.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCC---ceeccccc--cc---hhhhhhhhHHHHHHHhhhhhC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALG---GTCLNVGC--IP---SKALLHSSHMYHEAMHSFASH 110 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~G---G~~~~~~~--~p---~~~~~~~~~~~~~~~~~~~~~ 110 (507)
|+..+|++.||-||+.|+.|+.|.+.+ +++..+||.+.+. |+.+-... +| ...-+..+.....+.+++...
T Consensus 2 ~~~~~DliGIG~GPfNL~LA~ll~e~~~~~~lFLerkp~F~WHpGmllegstlQv~FlkDLVTl~~PTs~ySFLNYL~~h 81 (436)
T COG3486 2 MAEVLDLIGIGIGPFNLSLAALLEEHSGLKSLFLERKPDFSWHPGMLLEGSTLQVPFLKDLVTLVDPTSPYSFLNYLHEH 81 (436)
T ss_pred CCcceeeEEEccCchHHHHHHHhccccCcceEEEecCCCCCcCCCcccCCccccccchhhhccccCCCCchHHHHHHHHc
Confidence 456799999999999999999999984 8899999977552 33211111 11 000111122222334444333
Q ss_pred CcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEE---EecCCE---EEEEccCCceEEEEeCeEEEc
Q 010573 111 GVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGK---FISPSE---VSVDTIEGGNTVVKGKNIIIA 183 (507)
Q Consensus 111 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~---~~d~~~---~~v~~~~g~~~~~~~d~lvlA 183 (507)
+--+.- +++.... ..+....++.+|....+.. +..+ .+. .++.+. ..+.+.++ ..+.++.|||+
T Consensus 82 ~RLy~F--l~~e~f~-i~R~Ey~dY~~Waa~~l~~----~rfg~~V~~i~~~~~d~~~~~~~~t~~~--~~y~ar~lVlg 152 (436)
T COG3486 82 GRLYEF--LNYETFH-IPRREYNDYCQWAASQLPS----LRFGEEVTDISSLDGDAVVRLFVVTANG--TVYRARNLVLG 152 (436)
T ss_pred chHhhh--hhhhccc-ccHHHHHHHHHHHHhhCCc----cccCCeeccccccCCcceeEEEEEcCCC--cEEEeeeEEEc
Confidence 311110 0111100 1111123333333333321 1222 222 233322 22445555 58999999999
Q ss_pred cCCCCCCCCCCc-cCCceEecchhhcccc-C-C-CCeEEEEcCcHHHHHHHHHHHhc----CCeeEEEcccCccCCC---
Q 010573 184 TGSDVKSLPGIT-IDEKRIVSSTGALALN-E-V-PKKLVVIGAGYIGLEMGSVWARL----GSEVTVVEFAADIVPS--- 252 (507)
Q Consensus 184 tG~~p~~~pg~~-~~~~~~~~~~~~~~~~-~-~-~~~vvVvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~~~~--- 252 (507)
+|.+|..+|... ..+..++++.+..... + . .++|.|||+|.+|.|+...|... ..++.|+.|+..++|.
T Consensus 153 ~G~~P~IP~~f~~l~~~~vfHss~~~~~~~~~~~~~~V~ViG~GQSAAEi~~~Ll~~~~~~~~~l~witR~~gf~p~d~S 232 (436)
T COG3486 153 VGTQPYIPPCFRSLIGERVFHSSEYLERHPELLQKRSVTVIGSGQSAAEIFLDLLNSQPPQDYQLNWITRSSGFLPMDYS 232 (436)
T ss_pred cCCCcCCChHHhCcCccceeehHHHHHhhHHhhcCceEEEEcCCccHHHHHHHHHhCCCCcCccceeeeccCCCCccccc
Confidence 999998777654 4455677776665432 2 1 34599999999999999888643 3468899999887642
Q ss_pred ------CCHHHH------------------------------HHH-----HHHHH--hcCcEEEcCceEEEEEEcCCe-E
Q 010573 253 ------MDGEIR------------------------------KQF-----QRSLE--KQKMKFMLKTKVVGVDLSGDG-V 288 (507)
Q Consensus 253 ------~d~~~~------------------------------~~~-----~~~l~--~~Gv~i~~~~~v~~i~~~~~~-v 288 (507)
+.|+.. ..+ ++.+. +..+.++.++.++.++..+++ +
T Consensus 233 kf~~e~F~P~y~dyfy~l~~~~r~~ll~~~~~~YkgI~~~ti~~Iy~~lY~~~l~~~~~~v~l~~~~ev~~~~~~G~g~~ 312 (436)
T COG3486 233 KFGLEYFSPEYTDYFYGLPPEARDELLRKQRLLYKGISFDTIEEIYDLLYEQSLGGRKPDVRLLSLSEVQSVEPAGDGRY 312 (436)
T ss_pred hhhhhhcCchhHHHHhcCCHHHHHHHHhhcCccccccCHHHHHHHHHHHHHHHhcCCCCCeeeccccceeeeecCCCceE
Confidence 222111 111 11111 246889999999999988876 8
Q ss_pred EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCccc--CceecCCCCeecCCCCCC--CC---CCeEEecCCC-----
Q 010573 289 KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKI--GVETDKMGRIPVNERFAT--NI---PGVYAIGDVI----- 356 (507)
Q Consensus 289 ~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~--gl~~~~~G~i~Vd~~~~t--~~---~~IyA~GD~a----- 356 (507)
.+.+....+++.+++++|.||+|||++...+.+ ++.+ .+..+++|...|++.++. .- -.||+.|-+.
T Consensus 313 ~l~~~~~~~~~~~t~~~D~vIlATGY~~~~P~f-L~~l~d~l~~d~~g~l~I~~dY~v~~~~~~~~~ifvqn~e~htHGi 391 (436)
T COG3486 313 RLTLRHHETGELETVETDAVILATGYRRAVPSF-LEGLADRLQWDDDGRLVIGRDYRVLWDGPGKGRIFVQNAELHTHGI 391 (436)
T ss_pred EEEEeeccCCCceEEEeeEEEEecccccCCchh-hhhHHHhhcccccCCeEecCceeeecCCCCcceEEEeccccccccc
Confidence 888888778888999999999999999666532 3333 366788899999988652 11 2599999777
Q ss_pred CCCCcHhHHHHHHHHHHHHHcCC
Q 010573 357 PGPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 357 ~~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
+.|.+.-.|.+.+.++- .++|.
T Consensus 392 g~pdLsl~a~Raa~I~~-~L~g~ 413 (436)
T COG3486 392 GAPDLSLGAWRAAVILN-SLLGR 413 (436)
T ss_pred CCccchHHHHHHHHHHH-HHhCc
Confidence 34667777777766554 44444
No 87
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=99.80 E-value=1.5e-18 Score=157.87 Aligned_cols=188 Identities=18% Similarity=0.234 Sum_probs=106.9
Q ss_pred EEECCChHHHHHHHHHHHCCCc-EEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHHHH
Q 010573 47 VVIGGGPGGYVAAIKAAQLGLK-TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMM 125 (507)
Q Consensus 47 vIIG~G~aGl~aA~~l~~~g~~-V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 125 (507)
+||||||+|+++|.+|++.|.+ ++|+|+++.+||.|......+......... ..++++ +-..+......
T Consensus 1 ~IIGaG~aGl~~a~~l~~~g~~~v~v~e~~~~~Gg~w~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~ 70 (203)
T PF13738_consen 1 VIIGAGPAGLAAAAHLLERGIDPVVVLERNDRPGGVWRRYYSYTRLHSPSFFS---------SDFGLP-DFESFSFDDSP 70 (203)
T ss_dssp EEE--SHHHHHHHHHHHHTT---EEEEESSSSSTTHHHCH-TTTT-BSSSCCT---------GGSS---CCCHSCHHHHH
T ss_pred CEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCeeEEeCCCCccccCcccc---------ccccCC-cccccccccCC
Confidence 6999999999999999999999 999999999999987532111100000000 000000 00000011000
Q ss_pred HH----HHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccCCceEEEEeCeEEEccCC--CCC--CCCCC
Q 010573 126 AQ----KDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGS--DVK--SLPGI 194 (507)
Q Consensus 126 ~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~--~p~--~~pg~ 194 (507)
.+ .....+.+.++++.+.++.++++..+. +..+ +.+.+.|.+.++ +++.+|+||+|||. .|. .+|+
T Consensus 71 ~~~~~~~~~~~~~v~~yl~~~~~~~~l~i~~~~~V~~v~~~~~~w~v~~~~~--~~~~a~~VVlAtG~~~~p~~p~~~g- 147 (203)
T PF13738_consen 71 EWRWPHDFPSGEEVLDYLQEYAERFGLEIRFNTRVESVRRDGDGWTVTTRDG--RTIRADRVVLATGHYSHPRIPDIPG- 147 (203)
T ss_dssp HHHHSBSSEBHHHHHHHHHHHHHHTTGGEETS--EEEEEEETTTEEEEETTS---EEEEEEEEE---SSCSB---S-TT-
T ss_pred CCCCCcccCCHHHHHHHHHHHHhhcCcccccCCEEEEEEEeccEEEEEEEec--ceeeeeeEEEeeeccCCCCcccccc-
Confidence 00 000123344556667777777766543 3332 344588888887 78999999999996 442 2344
Q ss_pred ccCCceEecchhhccc-cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 195 TIDEKRIVSSTGALAL-NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~-~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
..+. ..+++.+.... ...+++|+|||+|.+|+|++..|.+.|.+|+++.|++.
T Consensus 148 ~~~~-~~~h~~~~~~~~~~~~k~V~VVG~G~SA~d~a~~l~~~g~~V~~~~R~~~ 201 (203)
T PF13738_consen 148 SAFR-PIIHSADWRDPEDFKGKRVVVVGGGNSAVDIAYALAKAGKSVTLVTRSPI 201 (203)
T ss_dssp GGCS-EEEEGGG-STTGGCTTSEEEEE--SHHHHHHHHHHTTTCSEEEEEESS--
T ss_pred cccc-ceEehhhcCChhhcCCCcEEEEcChHHHHHHHHHHHhhCCEEEEEecCCC
Confidence 1122 45555554433 33479999999999999999999999999999999875
No 88
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=99.79 E-value=1.9e-18 Score=173.75 Aligned_cols=193 Identities=21% Similarity=0.310 Sum_probs=123.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCc-EEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLK-TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~-V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (507)
....+||+|||||++|+++|++|++.|.. ++|+||++..||+|.+. +.|+..+..+...+. +...........
T Consensus 5 ~~~~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg~W~~~-ry~~l~~~~p~~~~~-----~~~~p~~~~~~~ 78 (443)
T COG2072 5 VATHTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGGTWRYN-RYPGLRLDSPKWLLG-----FPFLPFRWDEAF 78 (443)
T ss_pred cCCcccEEEECCCHHHHHHHHHHHHcCCCcEEEEEccCCcCCcchhc-cCCceEECCchheec-----cCCCccCCcccC
Confidence 45578999999999999999999999988 99999999999997653 333332222211110 111111000000
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhCCc----EEEEeE--EEEe-cCCEEEEEccCCceEEEEeCeEEEccCC--CC-
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKV----TYVKGY--GKFI-SPSEVSVDTIEGGNTVVKGKNIIIATGS--DV- 188 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~--~~~~-d~~~~~v~~~~g~~~~~~~d~lvlAtG~--~p- 188 (507)
-.+.. +..++.+.++++++ .+.... +.+. +...++|.++++...++.+|+||+|||. .|
T Consensus 79 ~~~~~-----------~~~y~~~~~~~y~~~~~i~~~~~v~~~~~~~~~~~w~V~~~~~~~~~~~a~~vV~ATG~~~~P~ 147 (443)
T COG2072 79 APFAE-----------IKDYIKDYLEKYGLRFQIRFNTRVEVADWDEDTKRWTVTTSDGGTGELTADFVVVATGHLSEPY 147 (443)
T ss_pred CCccc-----------HHHHHHHHHHHcCceeEEEcccceEEEEecCCCCeEEEEEcCCCeeeEecCEEEEeecCCCCCC
Confidence 11111 12222333444433 333321 2222 2346788877774434789999999994 44
Q ss_pred -CCCCCCcc-CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 189 -KSLPGITI-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 189 -~~~pg~~~-~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
+.++|.+. .+..+++++........+|+|+|||+|.+|++++..|.+.|.+||++.|++..
T Consensus 148 iP~~~G~~~f~g~~~HS~~~~~~~~~~GKrV~VIG~GaSA~di~~~l~~~ga~vt~~qRs~~~ 210 (443)
T COG2072 148 IPDFAGLDEFKGRILHSADWPNPEDLRGKRVLVIGAGASAVDIAPELAEVGASVTLSQRSPPH 210 (443)
T ss_pred CCCCCCccCCCceEEchhcCCCccccCCCeEEEECCCccHHHHHHHHHhcCCeeEEEecCCCc
Confidence 34566553 44445555544555566999999999999999999999999999999998875
No 89
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated
Probab=99.78 E-value=5.5e-17 Score=160.85 Aligned_cols=158 Identities=22% Similarity=0.272 Sum_probs=121.1
Q ss_pred EEEEcCcHHHHHHH-HHHH----hcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEE
Q 010573 217 LVVIGAGYIGLEMG-SVWA----RLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLT 291 (507)
Q Consensus 217 vvVvG~G~~g~e~A-~~l~----~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~ 291 (507)
=.|++.+.+|+|.+ ..+. ++|++|+++.+.+..++.. ++.+.+.+.+++.|++++.++.|++++.+++++...
T Consensus 218 ~~V~~PavIGle~a~~v~~~L~~~LG~~V~~vp~~ppslpG~--rL~~aL~~~l~~~Gv~I~~g~~V~~v~~~~~~V~~v 295 (422)
T PRK05329 218 EAVLLPAVLGLDDDAAVLAELEEALGCPVFELPTLPPSVPGL--RLQNALRRAFERLGGRIMPGDEVLGAEFEGGRVTAV 295 (422)
T ss_pred CEEEECceecCCChHHHHHHHHHHHCCCEEEeCCCCCCCchH--HHHHHHHHHHHhCCCEEEeCCEEEEEEEeCCEEEEE
Confidence 37889999999998 6665 5799999999888877754 688889999999999999999999998777666544
Q ss_pred EeecCCCceEEEEcCEEEEeecCCCCCCCC---------------------------------CCcccCceecCCCCeec
Q 010573 292 LEPAAGGEKTILEADVVLVSAGRTPFTAGL---------------------------------GLDKIGVETDKMGRIPV 338 (507)
Q Consensus 292 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l---------------------------------~~~~~gl~~~~~G~i~V 338 (507)
.. .++....+.+|.||+|+|..+...+. .+...|+.+|++ ...+
T Consensus 296 ~~--~~g~~~~i~AD~VVLAtGrf~s~GL~a~~~~i~Epif~l~v~~~~~r~~w~~~~~~~~~p~~~~GV~~d~~-~~p~ 372 (422)
T PRK05329 296 WT--RNHGDIPLRARHFVLATGSFFSGGLVAERDGIREPIFGLDVLQPADRADWYQRDFFAPHPFLQFGVATDAT-LRPL 372 (422)
T ss_pred Ee--eCCceEEEECCEEEEeCCCcccCceeccCCccccccCCCCCCCCCchhhhhhhhhccCCchhhcCceECCC-cCcc
Confidence 32 23344679999999999987554320 123446666653 4556
Q ss_pred CCCCCCCCCCeEEecCCCCCCCcH------hHHHHHHHHHHHHHcCC
Q 010573 339 NERFATNIPGVYAIGDVIPGPMLA------HKAEEDGVACVEFLAGK 379 (507)
Q Consensus 339 d~~~~t~~~~IyA~GD~a~~~~~~------~~A~~~g~~aa~~i~~~ 379 (507)
|...++..+||||||++.+++..+ ..|+..|..||++|...
T Consensus 373 ~~~g~~~~~nl~a~G~vl~g~d~~~~~~g~Gva~~ta~~a~~~~~~~ 419 (422)
T PRK05329 373 DSQGGPVIENLYAAGAVLGGYDPIREGCGSGVALATALHAAEQIAEE 419 (422)
T ss_pred cCCCCeeccceEEeeehhcCCchHHhCCCchhHHHHHHHHHHHHHHh
Confidence 777777899999999999887643 57888899999888643
No 90
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
Probab=99.76 E-value=5.8e-17 Score=154.48 Aligned_cols=203 Identities=17% Similarity=0.240 Sum_probs=130.6
Q ss_pred CceEEEEeCeEEEccCCCCCCCCC---Cc-cCCceEecchhhcccc----------------CCCCeEEEE---cCcH--
Q 010573 170 GGNTVVKGKNIIIATGSDVKSLPG---IT-IDEKRIVSSTGALALN----------------EVPKKLVVI---GAGY-- 224 (507)
Q Consensus 170 g~~~~~~~d~lvlAtG~~p~~~pg---~~-~~~~~~~~~~~~~~~~----------------~~~~~vvVv---G~G~-- 224 (507)
++..++..-.+|+|||-.+..... ++ ....+++|..++.++. ..||+|+.| |+-.
T Consensus 294 ~e~ve~~vGaIIvAtGy~~~Da~~k~EyGYG~~~nVIT~lElErml~~~GPT~GkvlrpSdg~~pKrVaFIqCVGSRD~~ 373 (622)
T COG1148 294 PEEVELEVGAIIVATGYKPFDATRKEEYGYGKYPNVITNLELERMLNPNGPTGGKVLRPSDGKPPKRVAFIQCVGSRDFQ 373 (622)
T ss_pred CcEEEEEeceEEEEccccccCcchhhhcCCCCCcchhhHHHHHHHhccCCCCCceEEecCCCCCCceEEEEEEecCcCcc
Confidence 445678889999999988754321 11 1123455555554432 237888876 5433
Q ss_pred ------------HHHHHHHHHHhc--CCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEE
Q 010573 225 ------------IGLEMGSVWARL--GSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKL 290 (507)
Q Consensus 225 ------------~g~e~A~~l~~~--g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v 290 (507)
.++--|....+. ..+|++....-+ .+.....+.+.+.-++.||+++.+..-.-.+..++.+.|
T Consensus 374 ~~n~YCSrvCCm~slKqA~~Ike~~Pd~~v~I~YmDiR---afG~~yEefY~~~Q~~~gV~fIRGrvaei~e~p~~~l~V 450 (622)
T COG1148 374 VGNPYCSRVCCMVSLKQAQLIKERYPDTDVTIYYMDIR---AFGKDYEEFYVRSQEDYGVRFIRGRVAEIAEFPKKKLIV 450 (622)
T ss_pred cCChhhHHHHHHHHHhhhhhhhhcCCCcceeEEEEEee---ccCccHHHHHHhhhhhhchhhhcCChHHheeCCCCeeEE
Confidence 112222333332 356777765433 333344455555556789999866433333445556677
Q ss_pred EEeecCCCceEEEEcCEEEEeecCCCCCCCCC-CcccCceecCCCCeecC-CCCC---CCCCCeEEecCCCCCCCcHhHH
Q 010573 291 TLEPAAGGEKTILEADVVLVSAGRTPFTAGLG-LDKIGVETDKMGRIPVN-ERFA---TNIPGVYAIGDVIPGPMLAHKA 365 (507)
Q Consensus 291 ~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~-~~~~gl~~~~~G~i~Vd-~~~~---t~~~~IyA~GD~a~~~~~~~~A 365 (507)
..++.-.+.-.++++|+|++++|..|....-. ...+|++.+++|+++.. +.++ |+.+|||.+|-+ .+|.-...+
T Consensus 451 ~~EdTl~g~~~e~~~DLVVLa~Gmep~~g~~kia~iLgL~~~~~gF~k~~hPkl~pv~s~~~GIflAG~a-qgPkdI~~s 529 (622)
T COG1148 451 RVEDTLTGEVKEIEADLVVLATGMEPSEGAKKIAKILGLSQDEDGFLKEAHPKLRPVDSNRDGIFLAGAA-QGPKDIADS 529 (622)
T ss_pred EEEeccCccceecccceEEEeeccccCcchHHHHHhcCcccCCCCccccCCCCcccccccCCcEEEeecc-cCCccHHHH
Confidence 77776667778999999999999999654211 34568999999999876 5555 789999999977 466677778
Q ss_pred HHHHHHHHHHH
Q 010573 366 EEDGVACVEFL 376 (507)
Q Consensus 366 ~~~g~~aa~~i 376 (507)
+.||..||...
T Consensus 530 iaqa~aAA~kA 540 (622)
T COG1148 530 IAQAKAAAAKA 540 (622)
T ss_pred HHHhHHHHHHH
Confidence 88887776644
No 91
>PTZ00188 adrenodoxin reductase; Provisional
Probab=99.74 E-value=4.7e-16 Score=153.69 Aligned_cols=266 Identities=16% Similarity=0.217 Sum_probs=152.4
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHH-HCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcc
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAA-QLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV 117 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~-~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 117 (507)
+.....+|+||||||||++||.+|. +.|++|+|+|+.+.+||...+ +..|.+.
T Consensus 35 ~~~~~krVAIVGaGPAGlyaA~~Ll~~~g~~VtlfEk~p~pgGLvR~-GVaPdh~------------------------- 88 (506)
T PTZ00188 35 NEAKPFKVGIIGAGPSALYCCKHLLKHERVKVDIFEKLPNPYGLIRY-GVAPDHI------------------------- 88 (506)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhcCCeEEEEecCCCCccEEEE-eCCCCCc-------------------------
Confidence 3445678999999999999999865 569999999999999997442 2222110
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCC-----
Q 010573 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLP----- 192 (507)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~p----- 192 (507)
. ...+...+...+...++++..+ +. +.. .+..++ ..-.||.||+|+|+.+..+|
T Consensus 89 --~-----------~k~v~~~f~~~~~~~~v~f~gn-v~-VG~---Dvt~ee---L~~~YDAVIlAtGA~~l~ipi~~~~ 147 (506)
T PTZ00188 89 --H-----------VKNTYKTFDPVFLSPNYRFFGN-VH-VGV---DLKMEE---LRNHYNCVIFCCGASEVSIPIGQQD 147 (506)
T ss_pred --c-----------HHHHHHHHHHHHhhCCeEEEee-eE-ecC---ccCHHH---HHhcCCEEEEEcCCCCCCCCccccc
Confidence 0 1112222333444566776622 11 111 111111 22379999999999987666
Q ss_pred -------CCccC--CceEecchhhccc-------------c------CCCCeEEEEcCcHHHHHHHHHHH----------
Q 010573 193 -------GITID--EKRIVSSTGALAL-------------N------EVPKKLVVIGAGYIGLEMGSVWA---------- 234 (507)
Q Consensus 193 -------g~~~~--~~~~~~~~~~~~~-------------~------~~~~~vvVvG~G~~g~e~A~~l~---------- 234 (507)
+.+.. ...+++..++..+ . ...++++|||.|.+++++|..|.
T Consensus 148 ~~~~~~GGe~~~~~l~Gvf~A~dfV~WYNg~p~~~~~~~~~ayL~p~~~~~~vvVIG~GNVAlDvARiL~~~~d~L~~TD 227 (506)
T PTZ00188 148 EDKAVSGGETNPRKQNGIFHARDLIYFYNNMYNDVRCKAVDNYLNSFENFTTSIIIGNGNVSLDIARILIKSPDDLSKTD 227 (506)
T ss_pred ceeeeccccccccccCcEEehheEEEeecCCCCccccccccccccccCCCCcEEEECCCchHHHHHHHHccCHHHhhcCC
Confidence 43211 1233333332111 0 13478999999999999999753
Q ss_pred ----------hcCC-eeEEEcccCccCCCC------------------CH-H-----------------------HHHHH
Q 010573 235 ----------RLGS-EVTVVEFAADIVPSM------------------DG-E-----------------------IRKQF 261 (507)
Q Consensus 235 ----------~~g~-~Vtlv~~~~~~~~~~------------------d~-~-----------------------~~~~~ 261 (507)
+.+. +|+++-|+......| ++ + ..+.+
T Consensus 228 I~~~aL~~L~~s~v~~V~ivgRRGp~qaaFT~kElrEL~~l~~~~v~v~~~d~~~~~~~~~~~~~~r~~~r~~~~~~~~l 307 (506)
T PTZ00188 228 ISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAELRELISLENTKVILSKKNYDLCCHLKSDEENTNMKKRQHEIFQKMV 307 (506)
T ss_pred CcHHHHHHHHhCCCcEEEEEEecCHHHhCCCHHHHHHHhcCCCCeEEEChhhhcccccccchhhhhhhhhhhhhHHHHHH
Confidence 2232 578887765432111 01 1 01112
Q ss_pred HHHHH----------hcCcEEEcCceEEEEEEcCCeEE-EEEee--------cCCCceEEEEcCEEEEeecCCCCCCCCC
Q 010573 262 QRSLE----------KQKMKFMLKTKVVGVDLSGDGVK-LTLEP--------AAGGEKTILEADVVLVSAGRTPFTAGLG 322 (507)
Q Consensus 262 ~~~l~----------~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~--------~~~g~~~~i~~D~vi~a~G~~p~~~~l~ 322 (507)
.+... .+-+.+++....++|..+++.+. +.++. ..+++.+++++|+|+-++|++...
T Consensus 308 ~~~~~~~~~~~~~~~~r~i~l~F~~sP~ei~~~~~~v~~v~~~~n~l~~~~~~~tg~~~~~~~~lV~rsiGY~g~p---- 383 (506)
T PTZ00188 308 KNYEEVEKNKEFYKTYKIIEFIFYFEIRQIRPIDGAMKNVELELNKNVPMSFSSFKENKVLVTPLVIFATGFKKSN---- 383 (506)
T ss_pred HHHHhhccCccCCCCceEEEEEccCCceEEECCCCcEeEEEEEEeecccCccCCCCeeEEEEcCEEEEcccccCCC----
Confidence 22221 13456666777777765233332 44432 124556789999999999998753
Q ss_pred CcccCceecCCCCeecCCCCC--CCCCCeEEecCCCCCCC
Q 010573 323 LDKIGVETDKMGRIPVNERFA--TNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 323 ~~~~gl~~~~~G~i~Vd~~~~--t~~~~IyA~GD~a~~~~ 360 (507)
+. |+..|. . +.... .+ +..|++|++|-+-.+|.
T Consensus 384 ~~--g~pFd~-~-~~n~~-grv~~~~~g~Y~~GWiKrGP~ 418 (506)
T PTZ00188 384 FA--ENLYNQ-S-VQMFK-EDIGQHKFAIFKAGWFDKGPK 418 (506)
T ss_pred CC--CCCccc-c-CCCCC-CcccCCCCCcEEeeecCcCCC
Confidence 22 244442 2 22221 22 13799999999997775
No 92
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.74 E-value=9.7e-17 Score=158.90 Aligned_cols=251 Identities=18% Similarity=0.240 Sum_probs=143.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccc--cC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE--VD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~ 120 (507)
..+|+|||||||||++|..|.+.|++++++||.+.+||.|.+..... ...+..|+.+.-.+.+.-..+.+.+ -+
T Consensus 6 ~~~vaIIGAG~sGL~~ar~l~~~g~~v~vfEr~~~iGGlW~y~~~~~----~~~ss~Y~~l~tn~pKe~~~~~dfpf~~~ 81 (448)
T KOG1399|consen 6 SKDVAVIGAGPAGLAAARELLREGHEVVVFERTDDIGGLWKYTENVE----VVHSSVYKSLRTNLPKEMMGYSDFPFPER 81 (448)
T ss_pred CCceEEECcchHHHHHHHHHHHCCCCceEEEecCCccceEeecCccc----ccccchhhhhhccCChhhhcCCCCCCccc
Confidence 46999999999999999999999999999999999999998753221 0111123322222222111111111 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCc----EEEEeE--EEEecCCEEEEEccCCc--eEEEEeCeEEEccCCC--C--
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKV----TYVKGY--GKFISPSEVSVDTIEGG--NTVVKGKNIIIATGSD--V-- 188 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~--~~~~d~~~~~v~~~~g~--~~~~~~d~lvlAtG~~--p-- 188 (507)
.+..++...+.. .+++.+.+..++ .+-... +...+...+.|...+.. .....||.|++|||-. |
T Consensus 82 ~~~~~p~~~e~~----~YL~~yA~~F~l~~~i~f~~~v~~v~~~~~gkW~V~~~~~~~~~~~~ifd~VvVctGh~~~P~~ 157 (448)
T KOG1399|consen 82 DPRYFPSHREVL----EYLRDYAKHFDLLKMINFNTEVVRVDSIDKGKWRVTTKDNGTQIEEEIFDAVVVCTGHYVEPRI 157 (448)
T ss_pred CcccCCCHHHHH----HHHHHHHHhcChhhheEecccEEEEeeccCCceeEEEecCCcceeEEEeeEEEEcccCcCCCCC
Confidence 222223333333 333444444443 222221 22222235666654433 3688999999999976 4
Q ss_pred CCCCCC--c-cCCceEecchhhcc-ccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHH
Q 010573 189 KSLPGI--T-IDEKRIVSSTGALA-LNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRS 264 (507)
Q Consensus 189 ~~~pg~--~-~~~~~~~~~~~~~~-~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~ 264 (507)
+.+|+. + ..+ .++++.+... -...+|+|+|||+|.+|+|++..+++...+|++..+ ........+..
T Consensus 158 P~~~g~~~~~f~G-~~iHS~~Yk~~e~f~~k~VlVIG~g~SG~DIs~d~~~~ak~v~~~~~-~~~~~~~~~~~------- 228 (448)
T KOG1399|consen 158 PQIPGPGIESFKG-KIIHSHDYKSPEKFRDKVVLVVGCGNSGMDISLDLLRVAKEVHLSVV-SPKVHVEPPEI------- 228 (448)
T ss_pred CcCCCCchhhcCC-cceehhhccCcccccCceEEEECCCccHHHHHHHHHHhccCcceeee-cccccccccce-------
Confidence 234452 2 333 3444444443 334579999999999999999999999888888754 10000000000
Q ss_pred HHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCC
Q 010573 265 LEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGL 321 (507)
Q Consensus 265 l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l 321 (507)
...++-.+ ..|..+ .+++..+. . .+....+|.+|+|||+.-...++
T Consensus 229 -~~~~~~~~--~~i~~~--~e~~~~~~-~-----~~~~~~~D~ii~ctgy~y~fPfl 274 (448)
T KOG1399|consen 229 -LGENLWQV--PSIKSF--TEDGSVFE-K-----GGPVERVDRIIFCTGYKYKFPFL 274 (448)
T ss_pred -eecceEEc--cccccc--cCcceEEE-c-----CceeEEeeeEEEeeeeEeeccee
Confidence 00122222 114433 23333322 1 45678899999999999877764
No 93
>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism]
Probab=99.64 E-value=1e-14 Score=135.33 Aligned_cols=281 Identities=18% Similarity=0.254 Sum_probs=157.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+|.|||+||||+.+|.+|.+. +++|.|+|+.+.+.|. .++|+.++.+..
T Consensus 20 ~p~vcIVGsGPAGfYtA~~LLk~~~~~~Vdi~Ek~PvPFGL--------------------------vRyGVAPDHpEv- 72 (468)
T KOG1800|consen 20 TPRVCIVGSGPAGFYTAQHLLKRHPNAHVDIFEKLPVPFGL--------------------------VRYGVAPDHPEV- 72 (468)
T ss_pred CceEEEECCCchHHHHHHHHHhcCCCCeeEeeecCCcccce--------------------------eeeccCCCCcch-
Confidence 45899999999999999999885 6899999999888774 223333222111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC---CCCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV---KSLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p---~~~pg~~~~ 197 (507)
......+...++.....++-+-..- . .+.+. +.+-.||.||||.|+.. ..+||-+
T Consensus 73 ------------KnvintFt~~aE~~rfsf~gNv~vG---~--dvsl~---eL~~~ydavvLaYGa~~dR~L~IPGe~-- 130 (468)
T KOG1800|consen 73 ------------KNVINTFTKTAEHERFSFFGNVKVG---R--DVSLK---ELTDNYDAVVLAYGADGDRRLDIPGEE-- 130 (468)
T ss_pred ------------hhHHHHHHHHhhccceEEEecceec---c--cccHH---HHhhcccEEEEEecCCCCcccCCCCcc--
Confidence 1111112233344444443321110 0 11111 13447999999999865 3577754
Q ss_pred CceEecchhhccc------------cCCCCeEEEEcCcHHHHHHHHHHHhc----------------------CCeeEEE
Q 010573 198 EKRIVSSTGALAL------------NEVPKKLVVIGAGYIGLEMGSVWARL----------------------GSEVTVV 243 (507)
Q Consensus 198 ~~~~~~~~~~~~~------------~~~~~~vvVvG~G~~g~e~A~~l~~~----------------------g~~Vtlv 243 (507)
...+++.+.+..+ +....+++|||.|.+++++|..|..- =.+|+++
T Consensus 131 l~~V~Sarefv~Wyng~P~~~~le~dls~~~vvIvG~GNVAlDvARiLls~~~~l~~~TDi~~~aL~~L~~s~VkdV~lv 210 (468)
T KOG1800|consen 131 LSGVISAREFVGWYNGLPENQNLEPDLSGRKVVIVGNGNVALDVARILLSPQGPLFRRTDIPKLALNLLKRSNVKDVKLV 210 (468)
T ss_pred cccceehhhhhhhccCCCcccccCcccccceEEEEccCchhhhhhhhhhCCccccccccCCcHHHHhhhhcCCcceEEEE
Confidence 3456666555432 22268999999999999999887432 1367888
Q ss_pred cccCccCCCC------------------C--------------------HHHHHHHHHHHHh---------cCcEE---E
Q 010573 244 EFAADIVPSM------------------D--------------------GEIRKQFQRSLEK---------QKMKF---M 273 (507)
Q Consensus 244 ~~~~~~~~~~------------------d--------------------~~~~~~~~~~l~~---------~Gv~i---~ 273 (507)
.|+..+...| + +++.+.+.+.+.+ .+.+. .
T Consensus 211 gRRgp~~~aFTiKELRE~~~l~~~~~r~~~~~~~~~~~~~~~~~~~RpRkrl~ell~k~~~e~~~~~~~~~~~~k~w~~~ 290 (468)
T KOG1800|consen 211 GRRGPLQVAFTIKELREVLELPGARPRLDPVDFSGKWMDESETPQHRPRKRLTELLLKWAREHRAKASEEAGGSKQWHLR 290 (468)
T ss_pred eccCccceeeeHHHHHHHhCCCCcccccCchhccceeCCcccccccCchhHHHHHHHHHHHhhhhccccccCccchhHHH
Confidence 7765432110 0 1222333333222 11110 0
Q ss_pred cCceEEEEEEcCCe---EEEEE---e---ecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCC
Q 010573 274 LKTKVVGVDLSGDG---VKLTL---E---PAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFAT 344 (507)
Q Consensus 274 ~~~~v~~i~~~~~~---v~v~~---~---~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t 344 (507)
+.....+|..+.++ +.+.. + ....++.++++|++++.++|+....- . .|+..|.+.++.-|...+.
T Consensus 291 f~r~P~~i~~~~~~v~~~~~~~t~l~~~~~~~tg~~e~~p~~l~i~sIGYks~pv----~-~gipFd~~kgvv~n~~GrV 365 (468)
T KOG1800|consen 291 FFRTPGAILPGADGVSGVRFQVTILEGTQAVPTGAFETLPCGLLIRSIGYKSVPV----D-SGIPFDDKKGVVPNVNGRV 365 (468)
T ss_pred HhcCHHHhccCcccccceEEEeeeehhhcccccCceEeeccceeEeeeeeccccc----C-CCCCcccccCcccCCCceE
Confidence 11111222222111 11111 1 12346778999999999999876432 1 1344443333333333331
Q ss_pred ----CCCCeEEecCCCCCCC-cHhHHHHHHHHHHHHHc
Q 010573 345 ----NIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFLA 377 (507)
Q Consensus 345 ----~~~~IyA~GD~a~~~~-~~~~A~~~g~~aa~~i~ 377 (507)
-.|+||++|-+..+|. ....+++++...|+.|.
T Consensus 366 ~~s~~~pglY~sGW~k~GP~GvIattm~dAf~v~d~I~ 403 (468)
T KOG1800|consen 366 LVSGCSPGLYASGWVKHGPTGVIATTMQDAFEVADTIV 403 (468)
T ss_pred EeeccCCceEEEeeeccCCcceeeehhhhHHHHHHHHH
Confidence 3499999999998775 44556777777777765
No 94
>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion]
Probab=99.63 E-value=2.5e-15 Score=136.07 Aligned_cols=289 Identities=18% Similarity=0.243 Sum_probs=167.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-C-CcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcc-cCccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL-G-LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK-FSSVE 118 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~-g-~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~ 118 (507)
++++|+|||||.+|++.|.++.++ + -+|.|||..+.--. -|...+ ...|+. .+...
T Consensus 38 ~h~kvLVvGGGsgGi~~A~k~~rkl~~g~vgIvep~e~HyY-------QPgfTL--------------vGgGl~~l~~sr 96 (446)
T KOG3851|consen 38 KHFKVLVVGGGSGGIGMAAKFYRKLGSGSVGIVEPAEDHYY-------QPGFTL--------------VGGGLKSLDSSR 96 (446)
T ss_pred cceEEEEEcCCcchhHHHHHHHhhcCCCceEEecchhhccc-------CcceEE--------------eccchhhhhhcc
Confidence 568999999999999999999876 4 57999998542100 000000 000100 00000
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc-
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT- 195 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~- 195 (507)
-....+.+ .+.+.++..+...+++...|.+.+| ++|+||++|||+|..-. .++|+.
T Consensus 97 r~~a~liP-------------------~~a~wi~ekv~~f~P~~N~v~t~gg--~eIsYdylviA~Giql~y~~IkGl~E 155 (446)
T KOG3851|consen 97 RKQASLIP-------------------KGATWIKEKVKEFNPDKNTVVTRGG--EEISYDYLVIAMGIQLDYGKIKGLVE 155 (446)
T ss_pred Cccccccc-------------------CCcHHHHHHHHhcCCCcCeEEccCC--cEEeeeeEeeeeeceeccchhcChHh
Confidence 00000000 0111111223334677778888888 89999999999997652 455543
Q ss_pred -cCCceEec---chhh-------ccccC------CC-CeEEEEcCcHHHHHHHHH-HHhcCC--eeEEEcccCccCCCCC
Q 010573 196 -IDEKRIVS---STGA-------LALNE------VP-KKLVVIGAGYIGLEMGSV-WARLGS--EVTVVEFAADIVPSMD 254 (507)
Q Consensus 196 -~~~~~~~~---~~~~-------~~~~~------~~-~~vvVvG~G~~g~e~A~~-l~~~g~--~Vtlv~~~~~~~~~~d 254 (507)
++...+.+ .... ...+. .| ..+-..|+-.-.+-++.. +++.|. ++.++....-..-.--
T Consensus 156 al~tP~VcSnYSpkyvdk~y~~~~~fk~GNAIfTfPntpiKCAGAPQKi~yise~y~Rk~gvRd~a~iiy~Tsl~~iFgV 235 (446)
T KOG3851|consen 156 ALDTPGVCSNYSPKYVDKVYKELMNFKKGNAIFTFPNTPIKCAGAPQKIMYISESYFRKRGVRDNANIIYNTSLPTIFGV 235 (446)
T ss_pred hccCCCcccccChHHHHHHHHHHHhccCCceEEecCCCccccCCCchhhhhhhHHHHHHhCccccccEEEecCccceecH
Confidence 22223322 2111 11111 11 223344666666666655 455664 4555543321100113
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMG 334 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G 334 (507)
+...+.+++..++++|++.......++..++..-..+.-+ ..|...+++++++-+....++... +....+ .|..|
T Consensus 236 k~Y~~AL~k~~~~rni~vn~krnLiEV~~~~~~AvFe~L~-kPG~t~ei~yslLHv~Ppms~pe~---l~~s~~-adktG 310 (446)
T KOG3851|consen 236 KHYADALEKVIQERNITVNYKRNLIEVRTNDRKAVFENLD-KPGVTEEIEYSLLHVTPPMSTPEV---LANSDL-ADKTG 310 (446)
T ss_pred HHHHHHHHHHHHhcceEeeeccceEEEeccchhhHHHhcC-CCCceeEEeeeeeeccCCCCChhh---hhcCcc-cCccc
Confidence 4567788888899999999888888886554432222211 236677899999988777665443 344432 36679
Q ss_pred CeecCCC-CC-CCCCCeEEecCCCCCCCc--HhHHHHHHHHHHHHHc
Q 010573 335 RIPVNER-FA-TNIPGVYAIGDVIPGPML--AHKAEEDGVACVEFLA 377 (507)
Q Consensus 335 ~i~Vd~~-~~-t~~~~IyA~GD~a~~~~~--~~~A~~~g~~aa~~i~ 377 (507)
++.||.. +| +..||||++|||.+.|.. +..+..|..+.-+|+.
T Consensus 311 fvdVD~~TlQs~kypNVFgiGDc~n~PnsKTaAAvaaq~~vv~~nl~ 357 (446)
T KOG3851|consen 311 FVDVDQSTLQSKKYPNVFGIGDCMNLPNSKTAAAVAAQSPVVDKNLT 357 (446)
T ss_pred ceecChhhhccccCCCceeeccccCCCchhhHHHHHhcCchhhhhHH
Confidence 9999975 66 689999999999988863 3333345556666664
No 95
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.62 E-value=5.4e-13 Score=129.58 Aligned_cols=203 Identities=15% Similarity=0.192 Sum_probs=119.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccc-------cchhhhhhh-hHHHHHHHhhhhhCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGC-------IPSKALLHS-SHMYHEAMHSFASHG 111 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~-------~p~~~~~~~-~~~~~~~~~~~~~~g 111 (507)
+++|+|||+|++|+..|.+|.+. ...|.|+|+...+|+-..+... +|+..+.-. ...+..+.+++...+
T Consensus 1 ~~~VAIIGgG~sGi~~A~~Ll~~~~~~~~Isi~e~~~~~G~GiaYs~~~p~~~lNv~a~~mS~~~pD~p~~F~~WL~~~~ 80 (474)
T COG4529 1 MFKVAIIGGGFSGIYMAAHLLKSPRPSGLISIFEPRPNFGQGIAYSTEEPEHLLNVPAARMSAFAPDIPQDFVRWLQKQL 80 (474)
T ss_pred CceEEEECCchHHHHHHHHHHhCCCCCCceEEeccccccCCCccCCCCCchhhhccccccccccCCCCchHHHHHHHhcc
Confidence 36899999999999999999986 2339999999998855544433 333332222 222333444444431
Q ss_pred cccCcc--ccChHHHHHHHHHHHHHHHHHHHHHHHhCC---cEEEEeEEEEec----CCEEEEEccCCceEEEEeCeEEE
Q 010573 112 VKFSSV--EVDLPAMMAQKDKAVSNLTRGIEGLFKKNK---VTYVKGYGKFIS----PSEVSVDTIEGGNTVVKGKNIII 182 (507)
Q Consensus 112 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~d----~~~~~v~~~~g~~~~~~~d~lvl 182 (507)
-...+. ...+...+..+.-+.+.+.+.+..++++.. +.+++.++..+. .....+...+| ....+|-+|+
T Consensus 81 ~~~~d~~~~~~d~~~y~pR~lfG~Yl~e~l~~l~~~~~~~~v~~~~~~a~~~~~~~n~~~~~~~~~~g--~~~~ad~~Vl 158 (474)
T COG4529 81 QRYRDPEDINHDGQAYPPRRLFGEYLREQLAALLARGRQTRVRTIREEATSVRQDTNAGGYLVTTADG--PSEIADIIVL 158 (474)
T ss_pred cccCChhhcCCccccccchhHHHHHHHHHHHHHHHhcCccceeEEeeeeecceeccCCceEEEecCCC--CeeeeeEEEE
Confidence 111100 011112222222222333344444444443 777777665433 23456677777 7789999999
Q ss_pred ccCCCCCCCCCCc--c--CCceEecchhhccc--cCCCCeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccC
Q 010573 183 ATGSDVKSLPGIT--I--DEKRIVSSTGALAL--NEVPKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAA 247 (507)
Q Consensus 183 AtG~~p~~~pg~~--~--~~~~~~~~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~ 247 (507)
|||..++..+... . ....+-+......+ .....+|+|+|+|.+.++....+.+.|. +||.++|+.
T Consensus 159 atgh~~~~~~~~~~~~~~~~~~ia~~~~~~~ld~v~~~drVli~GsgLt~~D~v~~l~~~gh~g~It~iSRrG 231 (474)
T COG4529 159 ATGHSAPPADPAARDLKGSPRLIADPYPANALDGVDADDRVLIVGSGLTSIDQVLVLRRRGHKGPITAISRRG 231 (474)
T ss_pred eccCCCCCcchhhhccCCCcceeccccCCcccccccCCCceEEecCCchhHHHHHHHhccCCccceEEEeccc
Confidence 9998765433311 1 11122222222222 2335669999999999999999999885 689998876
No 96
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=99.49 E-value=5.5e-13 Score=100.98 Aligned_cols=78 Identities=38% Similarity=0.681 Sum_probs=73.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEe
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLE 293 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~ 293 (507)
+++|||+|++|+|+|..|.++|.+||++++.+.+++.+++++.+.+.+.+++.||++++++.+++++.++++++++++
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~V~~~ 78 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHTNTKVKEIEKDGDGVEVTLE 78 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEESEEEEEEEEETTSEEEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEEe
Confidence 689999999999999999999999999999999999999999999999999999999999999999998877667765
No 97
>PRK08401 L-aspartate oxidase; Provisional
Probab=99.44 E-value=8.4e-13 Score=134.84 Aligned_cols=144 Identities=22% Similarity=0.289 Sum_probs=82.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccc---------hhh----------------hhhhh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIP---------SKA----------------LLHSS 97 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p---------~~~----------------~~~~~ 97 (507)
++||+|||+|.||++||..|++.|.+|+||||....+.++...+.++ ... +....
T Consensus 1 ~~DVvVVGaG~AGl~AAi~aae~G~~V~liek~~~~~~s~~a~ggi~~~~~~~ds~e~~~~d~~~~~~~~~d~~~v~~~~ 80 (466)
T PRK08401 1 MMKVGIVGGGLAGLTAAISLAKKGFDVTIIGPGIKKSNSYLAQAGIAFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVI 80 (466)
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCCCCCCcHHHcCCcccccCCCCcHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 37999999999999999999999999999999754332222222221 000 00001
Q ss_pred HHHHHHHhhhhhCCcccCccc----cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEe--cCCEEE-EEccCC
Q 010573 98 HMYHEAMHSFASHGVKFSSVE----VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI--SPSEVS-VDTIEG 170 (507)
Q Consensus 98 ~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--d~~~~~-v~~~~g 170 (507)
.......+++...|+++.... ..++............+...+.+..++.+++++.+.+..+ +...+. +.. ++
T Consensus 81 ~~~~~~i~~L~~~Gv~f~~~~~~~g~~~~r~~~~~~~~G~~i~~~L~~~~~~~gv~i~~~~v~~l~~~~g~v~Gv~~-~g 159 (466)
T PRK08401 81 SKSSEAYDFLTSLGLEFEGNELEGGHSFPRVFTIKNETGKHIIKILYKHARELGVNFIRGFAEELAIKNGKAYGVFL-DG 159 (466)
T ss_pred HHHHHHHHHHHHcCCCcccCCCcCCccCCeEEECCCCchHHHHHHHHHHHHhcCCEEEEeEeEEEEeeCCEEEEEEE-CC
Confidence 111223345666777654211 1111111001111234455555666778999887765544 222332 332 44
Q ss_pred ceEEEEeCeEEEccCCCCC
Q 010573 171 GNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 171 ~~~~~~~d~lvlAtG~~p~ 189 (507)
..+.++.||||||+...
T Consensus 160 --~~i~a~~VVLATGG~~~ 176 (466)
T PRK08401 160 --ELLKFDATVIATGGFSG 176 (466)
T ss_pred --EEEEeCeEEECCCcCcC
Confidence 57899999999998653
No 98
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=99.43 E-value=9e-13 Score=124.85 Aligned_cols=140 Identities=30% Similarity=0.440 Sum_probs=93.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC--------ceecccccc-chhhhhhhh---HH---------H
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG--------GTCLNVGCI-PSKALLHSS---HM---------Y 100 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G--------G~~~~~~~~-p~~~~~~~~---~~---------~ 100 (507)
+.+||+|||||||||.||..+++.|++|+|||+.+.+| |.|+..... |...+.+.+ ++ .
T Consensus 2 ~~~dviIIGgGpAGlMaA~~aa~~G~~V~lid~~~k~GrKil~sGgGrCN~Tn~~~~~~~ls~~p~~~~fl~sal~~ft~ 81 (408)
T COG2081 2 ERFDVIIIGGGPAGLMAAISAAKAGRRVLLIDKGPKLGRKILMSGGGRCNFTNSEAPDEFLSRNPGNGHFLKSALARFTP 81 (408)
T ss_pred CcceEEEECCCHHHHHHHHHHhhcCCEEEEEecCccccceeEecCCCCccccccccHHHHHHhCCCcchHHHHHHHhCCH
Confidence 35899999999999999999999999999999998885 777654432 221111111 11 2
Q ss_pred HHHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecC--CEEEEEccCCceEEEEe
Q 010573 101 HEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP--SEVSVDTIEGGNTVVKG 177 (507)
Q Consensus 101 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~--~~~~v~~~~g~~~~~~~ 177 (507)
+.++.+++..|+.... -+..++++..+. -..+.+.+...+++.+|+++..+ +..++. ....+.+.+| .++.+
T Consensus 82 ~d~i~~~e~~Gi~~~e--~~~Gr~Fp~sdk-A~~Iv~~ll~~~~~~gV~i~~~~~v~~v~~~~~~f~l~t~~g--~~i~~ 156 (408)
T COG2081 82 EDFIDWVEGLGIALKE--EDLGRMFPDSDK-ASPIVDALLKELEALGVTIRTRSRVSSVEKDDSGFRLDTSSG--ETVKC 156 (408)
T ss_pred HHHHHHHHhcCCeeEE--ccCceecCCccc-hHHHHHHHHHHHHHcCcEEEecceEEeEEecCceEEEEcCCC--CEEEc
Confidence 3455666777776431 111222222111 12344445566778899999885 444544 4688888888 58999
Q ss_pred CeEEEccCC
Q 010573 178 KNIIIATGS 186 (507)
Q Consensus 178 d~lvlAtG~ 186 (507)
|.+|||||.
T Consensus 157 d~lilAtGG 165 (408)
T COG2081 157 DSLILATGG 165 (408)
T ss_pred cEEEEecCC
Confidence 999999994
No 99
>TIGR00551 nadB L-aspartate oxidase. L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA.
Probab=99.36 E-value=1.3e-11 Score=126.88 Aligned_cols=145 Identities=20% Similarity=0.245 Sum_probs=80.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc-ccc-----c----h----------------hhhhhh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV-GCI-----P----S----------------KALLHS 96 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~-~~~-----p----~----------------~~~~~~ 96 (507)
++||||||+|.||++||+.+++.|. |+||||.+..+|..... |.+ + . ..+...
T Consensus 2 ~~DVlVVG~G~AGl~AA~~aa~~G~-V~lleK~~~~~g~s~~a~Ggi~~~~~~~ds~e~~~~d~~~~~~~~~d~~~v~~~ 80 (488)
T TIGR00551 2 SCDVVVIGSGAAGLSAALALADQGR-VIVLSKAPVTEGNSFYAQGGIAAVLAETDSIDSHVEDTLAAGAGICDREAVEFV 80 (488)
T ss_pred CccEEEECccHHHHHHHHHHHhCCC-EEEEEccCCCCCcchhcCcCeeeeecCCCCHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 4799999999999999999999997 99999986666544322 111 0 0 000011
Q ss_pred hHHHHHHHhhhhhCCcccCccc---c--------ChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeE-EEEe--cCC
Q 010573 97 SHMYHEAMHSFASHGVKFSSVE---V--------DLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGY-GKFI--SPS 161 (507)
Q Consensus 97 ~~~~~~~~~~~~~~g~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~~--d~~ 161 (507)
........+++...|+.+.... + .+.......+.....+...+.+..++ .+|+++.+. +..+ +..
T Consensus 81 ~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~~~~G~~l~~~L~~~~~~~~gi~i~~~~~v~~l~~~~g 160 (488)
T TIGR00551 81 VSDARSAVQWLVDQGVLFDRHEQGSYALTREGGHSYRRILHAADATGREVITTLVKKALNHPNIRIIEGENALDLLIETG 160 (488)
T ss_pred HHhHHHHHHHHHHcCCcceeCCCCCccccCCCCcCCCeEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECeEeeeeeccCC
Confidence 1112234456666777654211 0 00000000000112333444455555 689988874 4433 333
Q ss_pred EEE-EEccC-CceEEEEeCeEEEccCCCC
Q 010573 162 EVS-VDTIE-GGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 162 ~~~-v~~~~-g~~~~~~~d~lvlAtG~~p 188 (507)
.+. +...+ ++...+.++.||+|||...
T Consensus 161 ~v~Gv~~~~~~~~~~i~A~~VVlAtGG~~ 189 (488)
T TIGR00551 161 RVVGVWVWNRETVETCHADAVVLATGGAG 189 (488)
T ss_pred EEEEEEEEECCcEEEEEcCEEEECCCccc
Confidence 332 32222 3345789999999999764
No 100
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=99.36 E-value=2.1e-11 Score=127.13 Aligned_cols=108 Identities=16% Similarity=0.263 Sum_probs=79.9
Q ss_pred ccCCCCeEEEEcCcHHHHHHHHH-------HHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 210 LNEVPKKLVVIGAGYIGLEMGSV-------WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 210 ~~~~~~~vvVvG~G~~g~e~A~~-------l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
+...|+.++++|++.+++|++.. +.++|.+|++....+.....+...+...+.+.+++.|+++++++.++++.
T Consensus 156 ~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~L~~~~~~~gv~v~~~t~v~~l~ 235 (557)
T PRK07843 156 YGKVPLNMVVMQQDYVWLNLLKRHPRGVLRALKVGARTLWAKATGKNLLGMGQALAAGLRIGLQRAGVPVLLNTPLTDLY 235 (557)
T ss_pred cccccccccccHHHHHHHHhhhcCchhHHHHHHHHHHHHHHhccCCCcccCcHHHHHHHHHHHHcCCCEEEeCCEEEEEE
Confidence 34558889999999999998865 67778888776655544455677788888999999999999999999998
Q ss_pred EcCCeEE-EEEeecCCCceEEEEcC-EEEEeec-CCCCCC
Q 010573 283 LSGDGVK-LTLEPAAGGEKTILEAD-VVLVSAG-RTPFTA 319 (507)
Q Consensus 283 ~~~~~v~-v~~~~~~~g~~~~i~~D-~vi~a~G-~~p~~~ 319 (507)
.+++.+. +.... ++....+.++ .||+|+| +.+|.+
T Consensus 236 ~~~g~v~Gv~~~~--~g~~~~i~A~~~VIlAtGG~~~n~~ 273 (557)
T PRK07843 236 VEDGRVTGVHAAE--SGEPQLIRARRGVILASGGFEHNEQ 273 (557)
T ss_pred EeCCEEEEEEEEe--CCcEEEEEeceeEEEccCCcCcCHH
Confidence 7666554 44432 3344568886 5888765 555544
No 101
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism]
Probab=99.36 E-value=1.6e-11 Score=119.15 Aligned_cols=314 Identities=21% Similarity=0.260 Sum_probs=156.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC--------Cceeccccc--cc----------------hhhhhhhhH
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL--------GGTCLNVGC--IP----------------SKALLHSSH 98 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~--------GG~~~~~~~--~p----------------~~~~~~~~~ 98 (507)
||+|||+|.|||++|+.|.+. ++|+|+.|...- ||.....+- -| .........
T Consensus 9 dV~IiGsG~AGL~~AL~L~~~-~~V~vltk~~~~~~sS~~AQGGIAa~~~~~Ds~~~Hv~DTL~AG~glcD~~aV~~iv~ 87 (518)
T COG0029 9 DVLIIGSGLAGLTAALSLAPS-FRVTVLTKGPLGESSSYWAQGGIAAALSEDDSPELHVADTLAAGAGLCDEEAVEFIVS 87 (518)
T ss_pred cEEEECCcHHHHHHHHhCCCC-CcEEEEeCCCCCCccchhhcCceEeeeCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 899999999999999999998 999999996533 222211111 01 111111112
Q ss_pred HHHHHHhhhhhCCcccCccc---cChH--------HHHHHHHHHHHHHHHHHHHHHH-hCCcEEEEeE-EEE--ecCC-E
Q 010573 99 MYHEAMHSFASHGVKFSSVE---VDLP--------AMMAQKDKAVSNLTRGIEGLFK-KNKVTYVKGY-GKF--ISPS-E 162 (507)
Q Consensus 99 ~~~~~~~~~~~~g~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-~~~--~d~~-~ 162 (507)
.-....+++..+|+.|+.-. +.+. ++....+.....+...+.+..+ ..+|+++.+. +.. ++.. .
T Consensus 88 ~~~~ai~~Li~~Gv~FDr~~~g~~~lt~EggHS~rRIlH~~~~TG~~I~~~L~~~v~~~p~I~v~e~~~a~~li~~~~~~ 167 (518)
T COG0029 88 EAPEAIEWLIDLGVPFDRDEDGRLHLTREGGHSRRRILHAADATGKEIMTALLKKVRNRPNITVLEGAEALDLIIEDGIG 167 (518)
T ss_pred hHHHHHHHHHHcCCCCcCCCCCceeeeeecccCCceEEEecCCccHHHHHHHHHHHhcCCCcEEEecchhhhhhhcCCce
Confidence 22344566777888776322 2111 1111122223444454544444 4799999884 432 2333 2
Q ss_pred E-EEEc--cCCceEEEEeCeEEEccCCCCC------CCCCCccCCceE-----ecchhhccccCCCCeEEEEcCcHHHHH
Q 010573 163 V-SVDT--IEGGNTVVKGKNIIIATGSDVK------SLPGITIDEKRI-----VSSTGALALNEVPKKLVVIGAGYIGLE 228 (507)
Q Consensus 163 ~-~v~~--~~g~~~~~~~d~lvlAtG~~p~------~~pg~~~~~~~~-----~~~~~~~~~~~~~~~vvVvG~G~~g~e 228 (507)
+ -+.. .+++...+.++.+|||||.-.. .+.+...++..+ ....|.......| +++-.+ +-...-
T Consensus 168 ~~Gv~~~~~~~~~~~~~a~~vVLATGG~g~ly~~TTNp~~~~GdGIamA~rAGa~v~DlEFvQFHP-T~l~~~-~~~~~L 245 (518)
T COG0029 168 VAGVLVLNRNGELGTFRAKAVVLATGGLGGLYAYTTNPKGSTGDGIAMAWRAGAAVADLEFVQFHP-TALYIP-QRRAFL 245 (518)
T ss_pred EeEEEEecCCCeEEEEecCeEEEecCCCcccccccCCCccccccHHHHHHHcCCeecCccceeecc-ceecCC-CCccce
Confidence 2 2222 2223578899999999996531 111111111100 0001111100001 111111 111111
Q ss_pred HHHHHHhcCCeeEEEcccCccCCCCCH--------HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCce
Q 010573 229 MGSVWARLGSEVTVVEFAADIVPSMDG--------EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEK 300 (507)
Q Consensus 229 ~A~~l~~~g~~Vtlv~~~~~~~~~~d~--------~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~ 300 (507)
+...++-.|. +.+-..+.++++.++| -++..+...+++.|-.+++..+- + .+..+.
T Consensus 246 iSEAVRGEGA-~L~~~~GeRFm~~~~p~~ELAPRDVVARAI~~e~~~~g~~V~LD~s~--~--~~~~~~----------- 309 (518)
T COG0029 246 ISEAVRGEGA-ILVNEDGERFMPDYHPRGELAPRDVVARAIDAEMKRGGADVFLDISH--I--PGDFFE----------- 309 (518)
T ss_pred eehhhhcCcc-EEECCCCCccccCCCCccccchHHHHHHHHHHHHHhcCCeEEEeccC--C--Cchhhh-----------
Confidence 2233333342 2333455667764432 24455667777766655543221 1 011111
Q ss_pred EEEE-cCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCC-----CCcHhHHH----HHHH
Q 010573 301 TILE-ADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-----PMLAHKAE----EDGV 370 (507)
Q Consensus 301 ~~i~-~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~-----~~~~~~A~----~~g~ 370 (507)
+.++ ....+...|..|..+.++.. ....--.|+|.||.+.||++|++||+|.++.. ..++++.. -.|.
T Consensus 310 ~rFP~I~~~c~~~GiD~~r~~IPV~--PaaHY~mGGI~vD~~GrTsi~gLYAiGEvA~TGlHGANRLASNSLLE~vV~g~ 387 (518)
T COG0029 310 RRFPTIYAACLKAGIDPTREPIPVV--PAAHYTMGGIAVDANGRTSIPGLYAIGEVACTGLHGANRLASNSLLECLVFGK 387 (518)
T ss_pred hhCcHHHHHHHHcCCCcccCccCcc--chhheecccEEECCCCcccCcccEEeeeecccccccchhhhhhhHHHHHHHHH
Confidence 1121 11122334555554432211 11122348999999999999999999999942 33555544 4467
Q ss_pred HHHHHHcCC
Q 010573 371 ACVEFLAGK 379 (507)
Q Consensus 371 ~aa~~i~~~ 379 (507)
.+|++|.+.
T Consensus 388 ~aA~~i~~~ 396 (518)
T COG0029 388 RAAEDIAGR 396 (518)
T ss_pred HHHHHhhcc
Confidence 888888765
No 102
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.34 E-value=1.5e-11 Score=128.20 Aligned_cols=48 Identities=33% Similarity=0.426 Sum_probs=38.4
Q ss_pred CCCCeecCCCCCCCCCCeEEecCCCCCCC--------cHhHHHHHHHHHHHHHcCC
Q 010573 332 KMGRIPVNERFATNIPGVYAIGDVIPGPM--------LAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 332 ~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~--------~~~~A~~~g~~aa~~i~~~ 379 (507)
..|+|.||++.||++||+||+|+++++.. ....|+..|++|+++++..
T Consensus 347 t~GGi~vd~~~~t~IpGLyAaGE~~gg~hG~~rlgG~sl~~a~v~Gr~Ag~~aa~~ 402 (543)
T PRK06263 347 FMGGIRINEDCETNIPGLFACGEVAGGVHGANRLGGNALADTQVFGAIAGKSAAKN 402 (543)
T ss_pred ecCCEEECCCCcccCCCeEeccccccCCCCCCccchhhhhhhHHHHHHHHHHHHHH
Confidence 34889999999999999999999985431 2346888899999998643
No 103
>PRK08275 putative oxidoreductase; Provisional
Probab=99.34 E-value=2.9e-11 Score=126.24 Aligned_cols=147 Identities=23% Similarity=0.359 Sum_probs=81.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCC-cee-cccccc-----ch---------------------h
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALG-GTC-LNVGCI-----PS---------------------K 91 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~G-G~~-~~~~~~-----p~---------------------~ 91 (507)
..+||||||+|.||++||+.+++. |.+|+||||....+ |.. ...+.+ |. .
T Consensus 8 ~~~DVlVIG~G~AGl~AAi~aa~~g~g~~VilveK~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~d~~~~~~~~~d~~ 87 (554)
T PRK08275 8 VETDILVIGGGTAGPMAAIKAKERNPALRVLLLEKANVKRSGAISMGMDGLNNAVIPGHATPEQYTKEITIANDGIVDQK 87 (554)
T ss_pred EecCEEEECcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCCCCchhhhhhhHhhhhccCCCCHHHHHHHHHHhcCCCccHH
Confidence 458999999999999999999987 68999999976532 221 111111 10 0
Q ss_pred hhhhhhHHHHHHHhhhhhCCcccCcc---ccChHHHHHH-----HHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--c-
Q 010573 92 ALLHSSHMYHEAMHSFASHGVKFSSV---EVDLPAMMAQ-----KDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--S- 159 (507)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d- 159 (507)
.+...........+++...|+.+... .+........ .......+...+.+.+++.+++++.+. +..+ +
T Consensus 88 ~v~~~~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~~~~~~~~~~~~~G~~i~~~L~~~~~~~gv~i~~~~~v~~Li~~~ 167 (554)
T PRK08275 88 AVYAYAEHSFETIQQLDRWGVKFEKDETGDYAVKKVHHMGSYVLPMPEGHDIKKVLYRQLKRARVLITNRIMATRLLTDA 167 (554)
T ss_pred HHHHHHHhhHHHHHHHHHCCCeeEeCCCCCEeeecccccCcccccCCChHHHHHHHHHHHHHCCCEEEcceEEEEEEEcC
Confidence 00011111123445666777766421 1111110000 000112334445555667789988874 4433 3
Q ss_pred CCEEE-E---EccCCceEEEEeCeEEEccCCCC
Q 010573 160 PSEVS-V---DTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 160 ~~~~~-v---~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
...+. + ...+|+...+.++.||||||+..
T Consensus 168 ~g~v~Gv~~~~~~~g~~~~i~Ak~VIlATGG~~ 200 (554)
T PRK08275 168 DGRVAGALGFDCRTGEFLVIRAKAVILCCGAAG 200 (554)
T ss_pred CCeEEEEEEEecCCCcEEEEECCEEEECCCCcc
Confidence 22221 2 23456556789999999999864
No 104
>PRK09897 hypothetical protein; Provisional
Probab=99.33 E-value=1.4e-10 Score=118.55 Aligned_cols=188 Identities=15% Similarity=0.099 Sum_probs=98.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccccchhhhhh----------hhHHHHHHHh----hh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLH----------SSHMYHEAMH----SF 107 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~~~~----------~~~~~~~~~~----~~ 107 (507)
++|+||||||+|+++|.+|.+.+ .+|+|||++..+|.-..+...-++..+.. ...+...... .+
T Consensus 2 ~~IAIIGgGp~Gl~~a~~L~~~~~~l~V~lfEp~~~~G~G~ays~~~~~~~L~~N~~~~~~p~~~~~f~~Wl~~~~~~~~ 81 (534)
T PRK09897 2 KKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSHL 81 (534)
T ss_pred CeEEEECCcHHHHHHHHHHHhcCCCCcEEEEecCCCCCcceeecCCCChHHHHhcccccccCCChHHHHHHhhhhhHHHH
Confidence 58999999999999999998864 58999999888883322222111111110 1111111111 01
Q ss_pred hhCCcccCccccChHHHHHH--HHHHHHHHHHHHHHHHHhCC--cEEEEe-EEEEe--cCCEEEEEccCCceEEEEeCeE
Q 010573 108 ASHGVKFSSVEVDLPAMMAQ--KDKAVSNLTRGIEGLFKKNK--VTYVKG-YGKFI--SPSEVSVDTIEGGNTVVKGKNI 180 (507)
Q Consensus 108 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--v~~~~~-~~~~~--d~~~~~v~~~~g~~~~~~~d~l 180 (507)
...++..... +...+.++ ...++......+.+.+...+ +.++.. .+..+ +...+.+.+.++ ...+.+|+|
T Consensus 82 ~~~g~~~~~l--~~~~f~PR~l~G~YL~~~f~~l~~~a~~~G~~V~v~~~~~V~~I~~~~~g~~V~t~~g-g~~i~aD~V 158 (534)
T PRK09897 82 QRYGVKKETL--HDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQD-LPSETFDLA 158 (534)
T ss_pred HhcCCcceee--cCCccCCeecchHHHHHHHHHHHHHHHHcCCeEEEEECCEEEEEEEeCCEEEEEECCC-CeEEEcCEE
Confidence 1222221100 00011111 11112222222333444555 566654 55544 344566665442 267899999
Q ss_pred EEccCCCCCCCCCCccCCceEecchhhccc-cCCCCeEEEEcCcHHHHHHHHHHHhc
Q 010573 181 IIATGSDVKSLPGITIDEKRIVSSTGALAL-NEVPKKLVVIGAGYIGLEMGSVWARL 236 (507)
Q Consensus 181 vlAtG~~p~~~pg~~~~~~~~~~~~~~~~~-~~~~~~vvVvG~G~~g~e~A~~l~~~ 236 (507)
|||||..++..+... ...+.+..+.... ...+.+|+|+|.|.++++++..|...
T Consensus 159 VLAtGh~~p~~~~~~--~~yi~~pw~~~~~~~i~~~~V~I~GtGLt~iD~v~~Lt~~ 213 (534)
T PRK09897 159 VIATGHVWPDEEEAT--RTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQ 213 (534)
T ss_pred EECCCCCCCCCChhh--ccccCCCCcchhhcCCCCCeEEEECCCHHHHHHHHHHHhc
Confidence 999997654322111 1111122211111 11268999999999999999888755
No 105
>PRK06854 adenylylsulfate reductase subunit alpha; Validated
Probab=99.31 E-value=5.5e-10 Score=117.44 Aligned_cols=37 Identities=35% Similarity=0.553 Sum_probs=33.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALG 79 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~G 79 (507)
.+||||||+|.||++||+.+++. |.+|+||||....+
T Consensus 11 ~~DVlVIG~G~AGl~AAi~Aae~~~G~~V~lieK~~~~~ 49 (608)
T PRK06854 11 DTDILIIGGGMAGCGAAFEAKEWAPDLKVLIVEKANIKR 49 (608)
T ss_pred EeCEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCCcCC
Confidence 57999999999999999999998 99999999976543
No 106
>PRK12842 putative succinate dehydrogenase; Reviewed
Probab=99.31 E-value=6.1e-11 Score=124.36 Aligned_cols=244 Identities=20% Similarity=0.238 Sum_probs=137.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccc---cchhhhhhh---hHHHHHHHhhhhhCCccc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGC---IPSKALLHS---SHMYHEAMHSFASHGVKF 114 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~---~p~~~~~~~---~~~~~~~~~~~~~~g~~~ 114 (507)
..++||||||+|+||++||+.+++.|.+|+|+||....||+....+. +|...+... ......+..++....
T Consensus 7 ~~~~DVvVVG~G~aGl~AA~~aa~~G~~v~llEk~~~~gG~~~~s~g~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~--- 83 (574)
T PRK12842 7 ELTCDVLVIGSGAGGLSAAITARKLGLDVVVLEKEPVFGGTTAFSGGVLWIPGNPHAREAGVADSREAARTYLKHET--- 83 (574)
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCeEEEEecCCCCCCccceeCcEeccCCChHHHhcCcchhHHHHHHHHHHhc---
Confidence 34689999999999999999999999999999999888887655443 221111000 000111111111110
Q ss_pred CccccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC--CCCC
Q 010573 115 SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSL 191 (507)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~--p~~~ 191 (507)
....+...+. ...+.-.. ..++++. .++.+... . ..++---..|.. ++.+
T Consensus 84 -~~~~~~~~~~----~~~~~~~~-~i~wl~~~~g~~~~~~-~--------------------~~~~~~~~~~~~~~g~~~ 136 (574)
T PRK12842 84 -GAFFDAAAVE----AFLDNGPE-MVEFFERETEVKFVPT-L--------------------YPDYHPDAPGGVDIGRSI 136 (574)
T ss_pred -CCCCCHHHHH----HHHhccHH-HHHHHHhCCCCceeeC-C--------------------CCCCCCCCCCccCCCccc
Confidence 0001100000 00111111 1234433 34543211 0 000000000100 0100
Q ss_pred CCCccCCceEecchhhccccCCCCeEEEEcCcH--HHHHHHHHHHhcCCeeEEEcccCccCCCCC--------------H
Q 010573 192 PGITIDEKRIVSSTGALALNEVPKKLVVIGAGY--IGLEMGSVWARLGSEVTVVEFAADIVPSMD--------------G 255 (507)
Q Consensus 192 pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~--~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d--------------~ 255 (507)
+....+. ..+ .++..++...++++.|+|++. ++.+++..+...+..++++.+.+.+++.++ .
T Consensus 137 ~~~~~~~-~~l-~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~G~ 214 (574)
T PRK12842 137 LAAPYDI-RGL-GKDMARLRPPLKTITFIGMMFNSSNADLKHFFNATRSLTSFIYVAKRLATHLKDLALYRRGTQVTSGN 214 (574)
T ss_pred cCCCCCh-hhh-hhhHHhhcCCcccccccceecccchHHHHHHHhhccchhHHHHHHHHHHhhHHHHhhccCCcccccHH
Confidence 0000011 111 445556667789999999998 899999999999988888776665554332 4
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcC-EEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEAD-VVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~ 318 (507)
++...+.+.+++.|+++++++.++++..+++.+. +.+.+ .+....+.++ .||+|+|..++.
T Consensus 215 ~l~~~L~~~~~~~Gv~i~~~~~v~~l~~~~g~V~GV~~~~--~~~~~~i~a~k~VVlAtGg~~~n 277 (574)
T PRK12842 215 ALAARLAKSALDLGIPILTGTPARELLTEGGRVVGARVID--AGGERRITARRGVVLACGGFSHD 277 (574)
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEeeCCEEEEEEEEc--CCceEEEEeCCEEEEcCCCccch
Confidence 5667778888899999999999999987666554 44432 1122357786 799999987754
No 107
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=99.30 E-value=6.4e-11 Score=130.11 Aligned_cols=66 Identities=26% Similarity=0.256 Sum_probs=45.1
Q ss_pred ecCCCCCCCCCCcc--cCce-ecCCCCeecCCCCCCCCCCeEEecCCCCCCC-cHhHHHHHHHHHHHHHc
Q 010573 312 AGRTPFTAGLGLDK--IGVE-TDKMGRIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFLA 377 (507)
Q Consensus 312 ~G~~p~~~~l~~~~--~gl~-~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~-~~~~A~~~g~~aa~~i~ 377 (507)
.|..|..+.+.... .+.. ....|+|+||.+++|++||+||+|||++.+. ....|.-.|+.|+.++.
T Consensus 337 ~G~d~~~~~i~v~p~~~~~~~~~~~GGi~vd~~~~T~v~GLfAaGE~a~~~~nsl~~a~v~G~~Ag~~a~ 406 (897)
T PRK13800 337 RGHDYRTHDIEMHISEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLACVPHNYMIGAFVFGDLAGAHAA 406 (897)
T ss_pred cCCCcccccceecccccccccCCCcceEEecCCCcccCCCeEechhccCcchhhhhhHHHhHHHHHHHHH
Confidence 36777666533111 1111 1234899999999999999999999986533 34467788888888775
No 108
>PRK09231 fumarate reductase flavoprotein subunit; Validated
Probab=99.30 E-value=5.9e-11 Score=124.19 Aligned_cols=41 Identities=34% Similarity=0.464 Sum_probs=35.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceec
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~ 83 (507)
.+||||||+|.||++||+.+++. |.+|+|+||....+|.+.
T Consensus 4 ~~DVlVVG~G~AGl~AAi~Aa~~g~g~~V~lleK~~~~~g~s~ 46 (582)
T PRK09231 4 QADLAIIGAGGAGLRAAIAAAEANPNLKIALISKVYPMRSHTV 46 (582)
T ss_pred eeeEEEECccHHHHHHHHHHHHhCCCCcEEEEEccCCCCCChh
Confidence 47999999999999999999987 479999999876665443
No 109
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit. Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase.
Probab=99.29 E-value=2.2e-09 Score=105.52 Aligned_cols=121 Identities=15% Similarity=0.190 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC-CCC-----CCCCCcccCc
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT-PFT-----AGLGLDKIGV 328 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~-----~~l~~~~~gl 328 (507)
..+.+.+.+.+++.|++++.++.|++++.+++++...... ++....+.+|.+|+|+|.. ..- +.+.-.-.++
T Consensus 263 ~RL~~aL~~~~~~~Gg~il~g~~V~~i~~~~~~v~~V~t~--~g~~~~l~AD~vVLAaGaw~S~gL~a~l~~i~Epif~L 340 (419)
T TIGR03378 263 IRLEEALKHRFEQLGGVMLPGDRVLRAEFEGNRVTRIHTR--NHRDIPLRADHFVLASGSFFSNGLVAEFDKIYEPIFGL 340 (419)
T ss_pred HHHHHHHHHHHHHCCCEEEECcEEEEEEeeCCeEEEEEec--CCccceEECCEEEEccCCCcCHHHHhhcCceeeeccCC
Confidence 4667778899999999999999999998777776643321 1112479999999999987 321 0000000011
Q ss_pred ee---------------c----CCCCeecCCCCCC-----CCCCeEEecCCCCCCC------cHhHHHHHHHHHHHHHc
Q 010573 329 ET---------------D----KMGRIPVNERFAT-----NIPGVYAIGDVIPGPM------LAHKAEEDGVACVEFLA 377 (507)
Q Consensus 329 ~~---------------~----~~G~i~Vd~~~~t-----~~~~IyA~GD~a~~~~------~~~~A~~~g~~aa~~i~ 377 (507)
++ + -.-+|.+|+.+|. ..+|+||+|-+.+++. -...|+..|-.||++|+
T Consensus 341 ~v~~~~~r~~W~~~~ff~~~p~~~~GV~~d~~lrp~~~g~~~~Nl~a~G~vL~G~d~~~~gcG~GVai~Ta~~aa~~i~ 419 (419)
T TIGR03378 341 DVLQLPDRDQWYQHRFFAPHPFMQFGVKTDAQLRPSRGGQTIENLYAIGAVLGGYDPIFEGCGSGVAVSTALHAAEQII 419 (419)
T ss_pred CcCCCcchhhhcchhhcCCChhhhcCceEccccCccCCCcccccceEechhhcCCChHhcCCCchhHHHHHHHHHHhhC
Confidence 11 0 0124779999883 3899999999997654 23578888888888773
No 110
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases.; PDB: 2I0Z_A 3V76_A 2GQF_A.
Probab=99.29 E-value=9.4e-12 Score=123.35 Aligned_cols=140 Identities=26% Similarity=0.351 Sum_probs=75.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC--------ceecccc-ccchhhhh-----------h--hhHHHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG--------GTCLNVG-CIPSKALL-----------H--SSHMYH 101 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G--------G~~~~~~-~~p~~~~~-----------~--~~~~~~ 101 (507)
|||+|||||||||.||+.|++.|++|+|+||++.+| |.|+... ..+...+. . ......
T Consensus 1 ydviIIGgGaAGl~aA~~aa~~g~~V~vlE~~~~~gkKil~tG~GrCN~tn~~~~~~~~~~~~~~~~~f~~~~l~~f~~~ 80 (409)
T PF03486_consen 1 YDVIIIGGGAAGLMAAITAAEKGARVLVLERNKRVGKKILITGNGRCNLTNLNIDPSEFLSGYGRNPKFLKSALKRFSPE 80 (409)
T ss_dssp -SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS-HHHHHCGGGT-EEEETTSSGGGEECS-TBTTTCTHHHHHHS-HH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCcccccceeecCCCCccccccccchhhHhhhcccchHHHHHHHhcCCHH
Confidence 799999999999999999999999999999998885 7886444 22111111 0 111123
Q ss_pred HHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCE-EEEEccCCceEEEEe
Q 010573 102 EAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSE-VSVDTIEGGNTVVKG 177 (507)
Q Consensus 102 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~-~~v~~~~g~~~~~~~ 177 (507)
.+..++.+.|+...... ..++++..+ ....+...+...+++.+++++.++ +..+ +.+. +.|.++++ ..+.+
T Consensus 81 d~~~ff~~~Gv~~~~~~--~gr~fP~s~-~a~~Vv~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~f~v~~~~~--~~~~a 155 (409)
T PF03486_consen 81 DLIAFFEELGVPTKIEE--DGRVFPKSD-KASSVVDALLEELKRLGVEIHFNTRVKSIEKKEDGVFGVKTKNG--GEYEA 155 (409)
T ss_dssp HHHHHHHHTT--EEE-S--TTEEEETT---HHHHHHHHHHHHHHHT-EEE-S--EEEEEEETTEEEEEEETTT--EEEEE
T ss_pred HHHHHHHhcCCeEEEcC--CCEECCCCC-cHHHHHHHHHHHHHHcCCEEEeCCEeeeeeecCCceeEeeccCc--ccccC
Confidence 45667778887542110 011111111 112334445566777899999874 4444 3444 77777555 79999
Q ss_pred CeEEEccCCCC
Q 010573 178 KNIIIATGSDV 188 (507)
Q Consensus 178 d~lvlAtG~~p 188 (507)
|+||||||+..
T Consensus 156 ~~vILAtGG~S 166 (409)
T PF03486_consen 156 DAVILATGGKS 166 (409)
T ss_dssp SEEEE----SS
T ss_pred CEEEEecCCCC
Confidence 99999999754
No 111
>PRK09077 L-aspartate oxidase; Provisional
Probab=99.25 E-value=3.1e-10 Score=117.93 Aligned_cols=40 Identities=25% Similarity=0.444 Sum_probs=35.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
..+||||||+|.||++||..+++. .+|+||||....||..
T Consensus 7 ~~~DVlVVG~G~AGl~AA~~aa~~-~~VilveK~~~~~g~t 46 (536)
T PRK09077 7 HQCDVLIIGSGAAGLSLALRLAEH-RRVAVLSKGPLSEGST 46 (536)
T ss_pred ccCCEEEECchHHHHHHHHHHHHC-CCEEEEeccCCCCCCh
Confidence 458999999999999999999986 8999999987666643
No 112
>PRK06134 putative FAD-binding dehydrogenase; Reviewed
Probab=99.25 E-value=9.6e-11 Score=122.86 Aligned_cols=244 Identities=19% Similarity=0.232 Sum_probs=135.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc---ccchhhhhhhhHHHH---HHHhhhhhCCccc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG---CIPSKALLHSSHMYH---EAMHSFASHGVKF 114 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~---~~p~~~~~~~~~~~~---~~~~~~~~~g~~~ 114 (507)
..++||+|||+|++|++||..+++.|++|+||||++..||.+...+ |+|...+........ .....+....-
T Consensus 10 ~~~~dvvvvG~G~aG~~aa~~~~~~g~~v~~iek~~~~gg~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 87 (581)
T PRK06134 10 DLECDVLVIGSGAAGLSAAVTAAWHGLKVIVVEKDPVFGGTTAWSGGWMWIPRNPLARRAGIVEDIEQPRTYLRHELG-- 87 (581)
T ss_pred CCccCEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCccccccCceeecCccHHhhhccccchHHHHHHHHHHHhC--
Confidence 3468999999999999999999999999999999888999887765 466554432222111 11111111100
Q ss_pred CccccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC---C
Q 010573 115 SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK---S 190 (507)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~---~ 190 (507)
...+...+..+ .+.... ..+|+++ .++++..... . ..+.....-.++|.++. .
T Consensus 88 --~~~~~~l~~~~----~~~s~~-~~~wl~~~~gv~~~~~~~-----------~-----~d~~~~~~~~~~ggr~~~~~~ 144 (581)
T PRK06134 88 --ARYDAARIDAF----LEAGPH-MVAFFERHTALRFADGNA-----------I-----PDYHGDTPGAATGGRSLIAAP 144 (581)
T ss_pred --cCCCHHHHHHH----HhccHH-HHHHHHhcCCceeeecCC-----------C-----CCCCCCCCCCCCCCCeeccCC
Confidence 00111111111 111111 1245544 3565421100 0 00011111234444432 1
Q ss_pred CCCCccCCceEecchhhccccCCCCeEEEEcCcHHH-HHHHHHHHhcCCeeEEEcccCccCCC--------------CCH
Q 010573 191 LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIG-LEMGSVWARLGSEVTVVEFAADIVPS--------------MDG 255 (507)
Q Consensus 191 ~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g-~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------~d~ 255 (507)
+++... .++...+...+.++.++|++.++ .+++..+...+..+.++.+..++++. ...
T Consensus 145 ~~g~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 217 (581)
T PRK06134 145 FDGREL-------GALLERLRKPLRETSFMGMPIMAGADLAAFLNPTRSFRAFLHVARRFARHLIDLARHGRGMHLVNGN 217 (581)
T ss_pred CChhhh-------hHHHHHhccccccccccccccccHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccCCCcccCHH
Confidence 222110 02333344456677788888765 67777777666665554443322221 134
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEc-CEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEA-DVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~ 318 (507)
.+...+.+.+++.|++++.+++++++..+++.+. +.+.. ++....+.+ +.||+|+|-..+.
T Consensus 218 ~l~~~L~~~a~~~Gv~i~~~t~v~~l~~~~g~v~GV~~~~--~~~~~~i~a~k~VVlAtGg~~~n 280 (581)
T PRK06134 218 ALVARLLKSAEDLGVRIWESAPARELLREDGRVAGAVVET--PGGLQEIRARKGVVLAAGGFPHD 280 (581)
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEEE--CCcEEEEEeCCEEEEcCCCcccC
Confidence 5667788888999999999999999876655543 44432 122346888 9999999876643
No 113
>PRK07395 L-aspartate oxidase; Provisional
Probab=99.24 E-value=2.6e-11 Score=125.76 Aligned_cols=41 Identities=27% Similarity=0.367 Sum_probs=35.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
...+||||||+|.||++||+.+++ |.+|+||||....||..
T Consensus 7 ~~e~DVlVVG~G~AGl~AAi~A~~-G~~V~lieK~~~~gg~s 47 (553)
T PRK07395 7 PSQFDVLVVGSGAAGLYAALCLPS-HLRVGLITKDTLKTSAS 47 (553)
T ss_pred cccCCEEEECccHHHHHHHHHhhc-CCCEEEEEccCCCCCch
Confidence 346899999999999999999975 99999999987766654
No 114
>PRK08071 L-aspartate oxidase; Provisional
Probab=99.23 E-value=1.6e-10 Score=119.20 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=35.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
++||||||+|.||++||+++++ |.+|+||||....||.+.
T Consensus 3 ~~DVlVVG~G~AGl~AAl~a~~-g~~V~lveK~~~~~g~s~ 42 (510)
T PRK08071 3 SADVIIIGSGIAALTVAKELCH-EYNVIIITKKTKRNSNSH 42 (510)
T ss_pred ccCEEEECccHHHHHHHHHhhc-CCCEEEEeccCCCCCCch
Confidence 5799999999999999999987 899999999877666553
No 115
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.23 E-value=9.6e-11 Score=122.81 Aligned_cols=39 Identities=33% Similarity=0.600 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCce
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGT 81 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~ 81 (507)
++||||||||.||++||++|++. |.+|+|+||....||.
T Consensus 3 ~~DVlVIG~G~AGl~AAi~aa~~g~g~~V~vleK~~~~gg~ 43 (575)
T PRK05945 3 EHDVVIVGGGLAGCRAALEIKRLDPSLDVAVVAKTHPIRSH 43 (575)
T ss_pred cccEEEECccHHHHHHHHHHHHhcCCCcEEEEeccCCCchh
Confidence 57999999999999999999987 4899999997665543
No 116
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit. The terms succinate dehydrogenase and fumarate reductase may be used interchangeably in certain systems. However, a number of species have distinct complexes, with the fumarate reductase active under anaerobic conditions. This model represents the fumarate reductase flavoprotein subunit from several such species in which a distinct succinate dehydrogenase is also found. Not all bona fide fumarate reductases will be found by this model.
Probab=99.23 E-value=1.5e-10 Score=120.80 Aligned_cols=40 Identities=35% Similarity=0.454 Sum_probs=34.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCcee
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTC 82 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~ 82 (507)
.+||+|||+|.||++||..+++. |.+|+||||....||..
T Consensus 3 ~~DVlVIG~G~AGl~AAl~aa~~g~g~~V~lveK~~~~~~~s 44 (580)
T TIGR01176 3 QHDIAVIGAGGAGLRAAIAAAEANPHLDVALISKVYPMRSHT 44 (580)
T ss_pred ceeEEEECccHHHHHHHHHHHHhCCCCcEEEEEccCCCCCCc
Confidence 57999999999999999999987 58999999977665544
No 117
>PLN02815 L-aspartate oxidase
Probab=99.23 E-value=3.2e-10 Score=118.27 Aligned_cols=40 Identities=28% Similarity=0.363 Sum_probs=35.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
.++||||||+|.||++||+.+++.| +|+||||....||..
T Consensus 28 ~~~DVlVVG~G~AGl~AAl~Aae~G-~VvlleK~~~~gg~s 67 (594)
T PLN02815 28 KYFDFLVIGSGIAGLRYALEVAEYG-TVAIITKDEPHESNT 67 (594)
T ss_pred cccCEEEECccHHHHHHHHHHhhCC-CEEEEECCCCCCCcH
Confidence 4589999999999999999999999 999999987776643
No 118
>PRK06175 L-aspartate oxidase; Provisional
Probab=99.23 E-value=6.6e-11 Score=119.59 Aligned_cols=146 Identities=18% Similarity=0.186 Sum_probs=79.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc-cccc------------------------hhhhhhh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV-GCIP------------------------SKALLHS 96 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~-~~~p------------------------~~~~~~~ 96 (507)
.++||||||+|.||++||..++ .|.+|+||||.+..||..... +.+. ...+...
T Consensus 3 ~~~DVvVVG~G~AGl~AA~~a~-~G~~V~lleK~~~~gg~s~~a~ggi~~~~~~d~~~~~~~d~~~~g~~~~d~~lv~~~ 81 (433)
T PRK06175 3 LYADVLIVGSGVAGLYSALNLR-KDLKILMVSKGKLNECNTYLAQGGISVARNKDDITSFVEDTLKAGQYENNLEAVKIL 81 (433)
T ss_pred ccccEEEECchHHHHHHHHHhc-cCCCEEEEecCCCCCCchHHHhHhheeCCCCCCHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 4689999999999999999985 699999999987766543211 1111 0001111
Q ss_pred hHHHHHHHhhhhhCCcccCccc--cChH--------HHHHHHHHHHHHHHHHHHHHHH-hCCcEEEEeE-EEEe--cCCE
Q 010573 97 SHMYHEAMHSFASHGVKFSSVE--VDLP--------AMMAQKDKAVSNLTRGIEGLFK-KNKVTYVKGY-GKFI--SPSE 162 (507)
Q Consensus 97 ~~~~~~~~~~~~~~g~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-~~~~--d~~~ 162 (507)
........+++...|+.+.... .++. +.....+..-..+...+.+.++ +.+|+++.++ +..+ +...
T Consensus 82 ~~~s~e~i~wL~~~Gv~f~~~~~~~~~~~~g~~~~~r~~~~~~~~g~~l~~~L~~~~~~~~gV~i~~~t~v~~Li~~~~~ 161 (433)
T PRK06175 82 ANESIENINKLIDMGLNFDKDEKELSYTKEGAHSVNRIVHFKDNTGKKVEKILLKKVKKRKNITIIENCYLVDIIENDNT 161 (433)
T ss_pred HHHHHHHHHHHHHcCCccccCCCceeeeccCccccCeEEecCCCChHHHHHHHHHHHHhcCCCEEEECcEeeeeEecCCE
Confidence 1112234455666676653210 0110 0000000011223333444443 4589998874 4443 3333
Q ss_pred E-EE-EccCCceEEEEeCeEEEccCCCC
Q 010573 163 V-SV-DTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 163 ~-~v-~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
+ -+ ...+++...+.++.||||||+..
T Consensus 162 v~Gv~~~~~g~~~~i~Ak~VILAtGG~~ 189 (433)
T PRK06175 162 CIGAICLKDNKQINIYSKVTILATGGIG 189 (433)
T ss_pred EEEEEEEECCcEEEEEcCeEEEccCccc
Confidence 2 11 12344345789999999999744
No 119
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.22 E-value=2.9e-10 Score=119.29 Aligned_cols=38 Identities=32% Similarity=0.416 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGG 80 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 80 (507)
.++||||||+|.||++||+++++. .+|+|+||....+|
T Consensus 4 ~~~DVlVIG~G~AGl~AAl~aa~~-~~VilleK~~~~~g 41 (583)
T PRK08205 4 HRYDVVIVGAGGAGMRAAIEAGPR-ARTAVLTKLYPTRS 41 (583)
T ss_pred eeccEEEECccHHHHHHHHHHHhC-CCEEEEeCCCCCCC
Confidence 358999999999999999999986 99999999765443
No 120
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.21 E-value=3e-10 Score=118.62 Aligned_cols=40 Identities=38% Similarity=0.451 Sum_probs=35.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCce
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (507)
..+||||||+|.||++||+.+++.|.+|+||||....+|.
T Consensus 4 ~~~DVvVVG~G~AGl~AAl~Aae~G~~V~lveK~~~~~g~ 43 (566)
T PRK06452 4 IEYDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSH 43 (566)
T ss_pred ccCcEEEECccHHHHHHHHHHHHCCCcEEEEEccCCCCCc
Confidence 3579999999999999999999999999999997655543
No 121
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.21 E-value=1.9e-10 Score=120.67 Aligned_cols=40 Identities=30% Similarity=0.488 Sum_probs=35.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC---CcEEEEecCCCCCcee
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG---LKTTCIEKRGALGGTC 82 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g---~~V~lie~~~~~GG~~ 82 (507)
++||+|||+|.||++||..+++.| .+|+|+||....||.+
T Consensus 5 ~~DVlVVG~G~AGl~AA~~Aa~~G~~~~~V~lleK~~~~~~~s 47 (577)
T PRK06069 5 KYDVVIVGSGLAGLRAAVAAAERSGGKLSVAVVSKTQPMRSHS 47 (577)
T ss_pred ecCEEEECccHHHHHHHHHHHHhCCCCCcEEEEEcccCCCCCc
Confidence 579999999999999999999998 8999999977665543
No 122
>PRK07804 L-aspartate oxidase; Provisional
Probab=99.21 E-value=2.6e-10 Score=118.53 Aligned_cols=40 Identities=35% Similarity=0.547 Sum_probs=35.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCce
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (507)
.++||||||+|.||++||+.+++.|.+|+|+||....+|.
T Consensus 15 ~~~DVlVIG~G~AGl~AAi~aae~G~~VilleK~~~~~g~ 54 (541)
T PRK07804 15 DAADVVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGS 54 (541)
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCeEEEEEccCCCCCc
Confidence 3589999999999999999999999999999997766543
No 123
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Probab=99.20 E-value=2.5e-10 Score=120.07 Aligned_cols=40 Identities=35% Similarity=0.501 Sum_probs=35.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCce
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (507)
.++||||||+|.||++||+++++.|.+|+||||....+|.
T Consensus 49 ~~~DVlVIG~G~AGl~AAl~Aae~G~~VilveK~~~~~g~ 88 (635)
T PLN00128 49 HTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSH 88 (635)
T ss_pred eecCEEEECccHHHHHHHHHHHhcCCcEEEEEcCCCCCCc
Confidence 4689999999999999999999999999999997655543
No 124
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.19 E-value=2.6e-09 Score=112.88 Aligned_cols=38 Identities=26% Similarity=0.362 Sum_probs=34.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
.++||+|||+|.||++||..+++.|.+|+||||....+
T Consensus 34 ~~~DVlVVG~G~AGl~AAi~Aae~G~~VilieK~~~~~ 71 (640)
T PRK07573 34 RKFDVIVVGTGLAGASAAATLGELGYNVKVFCYQDSPR 71 (640)
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCcEEEEecCCCCC
Confidence 46899999999999999999999999999999866554
No 125
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase.
Probab=99.18 E-value=1.5e-10 Score=121.64 Aligned_cols=36 Identities=42% Similarity=0.581 Sum_probs=33.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCc
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGG 80 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 80 (507)
||||||+|.||++||+.+++.|.+|+||||....+|
T Consensus 1 DVlVVG~G~AGl~AA~~aae~G~~V~lleK~~~~~g 36 (566)
T TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGLNTAVISKVYPTRS 36 (566)
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 799999999999999999999999999999765543
No 126
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit. During dissimilatory sulfate reduction or sulfur oxidation, adenylylsulfate (APS) reductase catalyzes reversibly the two-electron reduction of APS to sulfite and AMP. Found in several bacterial lineages and in Archaeoglobales, APS reductase is a heterodimer composed of an alpha subunit containing a noncovalently bound FAD, and a beta subunit containing two [4Fe-4S] clusters. Described by this model is the alpha subunit of APS reductase, sharing common evolutionary origin with fumarate reductase/succinate dehydrogenase flavoproteins.
Probab=99.17 E-value=7.4e-09 Score=108.13 Aligned_cols=34 Identities=41% Similarity=0.663 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHH----HCCCcEEEEecCCCC
Q 010573 45 DVVVIGGGPGGYVAAIKAA----QLGLKTTCIEKRGAL 78 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~----~~g~~V~lie~~~~~ 78 (507)
||||||+|.||++||+.++ +.|.+|+|+||....
T Consensus 1 DVlVIGsG~AGL~AAl~Aa~~~~e~G~~VilieK~~~~ 38 (614)
T TIGR02061 1 DLLIVGGGMGGCGAAFEAVYWGDKKGLKIVLVEKANLE 38 (614)
T ss_pred CEEEECCCHHHHHHHHHHHhhhhhCCCeEEEEEccCCC
Confidence 7999999999999999998 679999999996543
No 127
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.17 E-value=7e-10 Score=116.36 Aligned_cols=40 Identities=30% Similarity=0.476 Sum_probs=35.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
+.||||||+|.||++||+.+++.|.+|+||||....||.+
T Consensus 3 ~~DVlVVG~G~AGl~AAi~Aa~~G~~V~lieK~~~~~g~s 42 (589)
T PRK08641 3 KGKVIVVGGGLAGLMATIKAAEAGVHVDLFSLVPVKRSHS 42 (589)
T ss_pred CccEEEECchHHHHHHHHHHHHcCCcEEEEEccCCCCCcc
Confidence 4699999999999999999999999999999977655443
No 128
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.16 E-value=5.2e-10 Score=118.09 Aligned_cols=37 Identities=41% Similarity=0.460 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
++||||||+|.||++||..+++.|.+|+||||....+
T Consensus 8 ~~DVvVIG~G~AGl~AAl~Aae~G~~V~lieK~~~~~ 44 (626)
T PRK07803 8 SYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGK 44 (626)
T ss_pred eecEEEECcCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 5799999999999999999999999999999976554
No 129
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes.
Probab=99.12 E-value=5.6e-09 Score=109.72 Aligned_cols=33 Identities=36% Similarity=0.453 Sum_probs=30.7
Q ss_pred EEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 46 VVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 46 vvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
|||||+|.||++||+.+++.|.+|+|+||....
T Consensus 1 VlVVG~G~AGl~AAl~Aae~G~~VilleK~~~~ 33 (603)
T TIGR01811 1 VIVVGTGLAGGMAAAKLAELGYHVKLFSYVDAP 33 (603)
T ss_pred CEEECccHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 689999999999999999999999999997744
No 130
>PRK08626 fumarate reductase flavoprotein subunit; Provisional
Probab=99.12 E-value=1.3e-09 Score=115.42 Aligned_cols=38 Identities=39% Similarity=0.437 Sum_probs=34.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGG 80 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 80 (507)
.+||||||+|.||++||+.+++.|.+|+||||....+|
T Consensus 5 ~~DVlVIG~G~AGl~AAi~Aae~G~~VivleK~~~~~s 42 (657)
T PRK08626 5 YTDALVIGAGLAGLRVAIAAAQRGLDTIVLSLVPAKRS 42 (657)
T ss_pred eccEEEECccHHHHHHHHHHHHcCCCEEEEeCCCCCCc
Confidence 57999999999999999999999999999999765443
No 131
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated
Probab=99.10 E-value=7.2e-10 Score=113.48 Aligned_cols=140 Identities=23% Similarity=0.402 Sum_probs=79.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC-CCCceeccccccchhhhhhhhHHHHHHH-------hhhhhCCcc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAM-------HSFASHGVK 113 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~~~~~~~~~~~~~-------~~~~~~g~~ 113 (507)
..|||+|||||+||+.||..+++.|++|+|||++. .+|+. +|.|+.......++.+.+. ......++.
T Consensus 3 ~~yDVIVVGGGpAG~eAA~~aAR~G~kV~LiE~~~d~iG~m----~CnpsiGG~akg~lvrEidalGg~~g~~~d~~giq 78 (618)
T PRK05192 3 EEYDVIVVGGGHAGCEAALAAARMGAKTLLLTHNLDTIGQM----SCNPAIGGIAKGHLVREIDALGGEMGKAIDKTGIQ 78 (618)
T ss_pred ccceEEEECchHHHHHHHHHHHHcCCcEEEEeccccccccc----CCccccccchhhHHHHHHHhcCCHHHHHHhhccCc
Confidence 45999999999999999999999999999999973 56642 4555443222222222111 111112222
Q ss_pred cCccccC-hHHHH-HHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEe--cCCEE-EEEccCCceEEEEeCeEEEccCCC
Q 010573 114 FSSVEVD-LPAMM-AQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFI--SPSEV-SVDTIEGGNTVVKGKNIIIATGSD 187 (507)
Q Consensus 114 ~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--d~~~~-~v~~~~g~~~~~~~d~lvlAtG~~ 187 (507)
+...... -+... .+..-....+...+.+.+++ .+++++.+.+..+ +...+ .|.+.+| ..+.++.||+|||..
T Consensus 79 ~r~ln~skGpAV~s~RaQiDr~ly~kaL~e~L~~~~nV~I~q~~V~~Li~e~grV~GV~t~dG--~~I~Ak~VIlATGTF 156 (618)
T PRK05192 79 FRMLNTSKGPAVRALRAQADRKLYRAAMREILENQPNLDLFQGEVEDLIVENGRVVGVVTQDG--LEFRAKAVVLTTGTF 156 (618)
T ss_pred eeecccCCCCceeCcHHhcCHHHHHHHHHHHHHcCCCcEEEEeEEEEEEecCCEEEEEEECCC--CEEECCEEEEeeCcc
Confidence 1100000 00000 00000012233344444544 4899888876554 34443 3666777 789999999999964
No 132
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]
Probab=99.07 E-value=1.5e-08 Score=93.25 Aligned_cols=121 Identities=21% Similarity=0.224 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCC-----------CC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGL-----------GL 323 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l-----------~~ 323 (507)
.+.+.+...+++.|..++.+..|.+.+-.+++++ +.++ +.....+.+|..|+|+|.--..... .+
T Consensus 259 Rl~~~L~~~f~~~Gg~~m~Gd~V~~a~~~~~~v~~i~tr---n~~diP~~a~~~VLAsGsffskGLvae~d~I~EPIf~l 335 (421)
T COG3075 259 RLHNQLQRQFEQLGGLWMPGDEVKKATCKGGRVTEIYTR---NHADIPLRADFYVLASGSFFSKGLVAERDKIYEPIFDL 335 (421)
T ss_pred hHHHHHHHHHHHcCceEecCCceeeeeeeCCeEEEEEec---ccccCCCChhHeeeeccccccccchhhhhhhhcchhhc
Confidence 4566778888999999999999999988777776 4433 2233457799999999843222110 01
Q ss_pred cccCc----eec----------CCCCeecCCCCCCC-----CCCeEEecCCCCCCC------cHhHHHHHHHHHHHHHcC
Q 010573 324 DKIGV----ETD----------KMGRIPVNERFATN-----IPGVYAIGDVIPGPM------LAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 324 ~~~gl----~~~----------~~G~i~Vd~~~~t~-----~~~IyA~GD~a~~~~------~~~~A~~~g~~aa~~i~~ 378 (507)
+-... ++. ..=++.+|+.+|.+ ++|+||||.+.+++. -...|+..|-.||+.|+.
T Consensus 336 di~~~~dR~~W~~~~ffapqp~~qfGV~tD~~lrp~~~g~~~eNL~aiGavlgGfdpi~egcGsGVaivta~~aa~qi~~ 415 (421)
T COG3075 336 DILQTADRAEWYHSDFFAPQPYQQFGVTTDDTLRPSRGGQTIENLYAIGAVLGGFDPIAEGCGSGVAIVTALHAAEQIAE 415 (421)
T ss_pred ccccCcchhhhhhccccCCChhHHhCcccccccCccccchHHHHHHHHHHHhcCCcHHHhcCCcchHHHHHHHHHHHHHH
Confidence 10000 000 00136678887743 579999999997754 234677777778877764
Q ss_pred C
Q 010573 379 K 379 (507)
Q Consensus 379 ~ 379 (507)
.
T Consensus 416 ~ 416 (421)
T COG3075 416 R 416 (421)
T ss_pred H
Confidence 3
No 133
>PRK07512 L-aspartate oxidase; Provisional
Probab=99.03 E-value=5e-09 Score=108.29 Aligned_cols=38 Identities=26% Similarity=0.373 Sum_probs=32.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC-CCce
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA-LGGT 81 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~-~GG~ 81 (507)
.++||||||+|.||++||++++ +.+|+||||... .||.
T Consensus 8 ~~~DVlVIG~G~AGl~AAl~Aa--~~~V~lleK~~~~~gg~ 46 (513)
T PRK07512 8 LTGRPVIVGGGLAGLMAALKLA--PRPVVVLSPAPLGEGAS 46 (513)
T ss_pred CcCCEEEECchHHHHHHHHHhC--cCCEEEEECCCCCCCcc
Confidence 4589999999999999999997 579999999765 4443
No 134
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional
Probab=99.01 E-value=3.1e-09 Score=99.24 Aligned_cols=135 Identities=24% Similarity=0.330 Sum_probs=78.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.++||+||||||||++||++|++.|++|+|+|++..+||.+...+. .+...+ .......+...++.+......
T Consensus 24 ~~~DVvIVGgGpAGl~AA~~la~~G~~V~liEk~~~~Ggg~~~gg~~~~~~~v------~~~~~~~l~~~gv~~~~~~~g 97 (257)
T PRK04176 24 LEVDVAIVGAGPSGLTAAYYLAKAGLKVAVFERKLSFGGGMWGGGMLFNKIVV------QEEADEILDEFGIRYKEVEDG 97 (257)
T ss_pred ccCCEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCccccccccc------hHHHHHHHHHCCCCceeecCc
Confidence 3589999999999999999999999999999998888765332221 111111 112234455566654321111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCC-EE-EEEcc------CC---ceEEEEeCeEEEccCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPS-EV-SVDTI------EG---GNTVVKGKNIIIATGS 186 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~-~~-~v~~~------~g---~~~~~~~d~lvlAtG~ 186 (507)
.... . ...+...+.+...+.+++++.+. +..+ +.+ .+ -+... .+ +...+.++.+|+|||.
T Consensus 98 ~~~v--d----~~~l~~~L~~~A~~~Gv~I~~~t~V~dl~~~~~g~V~Gvv~~~~~v~~~g~~~~~~~i~Ak~VI~ATG~ 171 (257)
T PRK04176 98 LYVA--D----SVEAAAKLAAAAIDAGAKIFNGVSVEDVILREDPRVAGVVINWTPVEMAGLHVDPLTIEAKAVVDATGH 171 (257)
T ss_pred ceec--c----HHHHHHHHHHHHHHcCCEEEcCceeceeeEeCCCcEEEEEEccccccccCCCCCcEEEEcCEEEEEeCC
Confidence 0000 0 12233444455567799988774 3332 222 21 11111 11 2367899999999996
Q ss_pred CC
Q 010573 187 DV 188 (507)
Q Consensus 187 ~p 188 (507)
..
T Consensus 172 ~a 173 (257)
T PRK04176 172 DA 173 (257)
T ss_pred Cc
Confidence 53
No 135
>TIGR02028 ChlP geranylgeranyl reductase. This model represents the reductase which acts reduces the geranylgeranyl group to the phytyl group in the side chain of chlorophyll. It is unclear whether the enzyme has a preference for acting before or after the attachment of the side chain to chlorophyllide a by chlorophyll synthase. This clade is restricted to plants and cyanobacteria to separate it from the homologues which act in the biosynthesis of bacteriochlorophyll.
Probab=98.99 E-value=2e-09 Score=108.00 Aligned_cols=142 Identities=20% Similarity=0.277 Sum_probs=77.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHH-hhhhhCC-cccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHG-VKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~g-~~~~~~~~~~ 121 (507)
+||+||||||||++||..|++.|++|+|+|++...+..| .+++|...+..... ..... ....... +......+++
T Consensus 1 ~~VvIVGaGPAG~~aA~~la~~G~~V~llE~~~~~~~~c--g~~i~~~~l~~~g~-~~~~~~~~i~~~~~~~p~~~~~~~ 77 (398)
T TIGR02028 1 LRVAVVGGGPAGASAAETLASAGIQTFLLERKPDNAKPC--GGAIPLCMVDEFAL-PRDIIDRRVTKMKMISPSNIAVDI 77 (398)
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCCCCc--cccccHhhHhhccC-chhHHHhhhceeEEecCCceEEEe
Confidence 589999999999999999999999999999976655555 34455433322110 01111 1111100 0011111111
Q ss_pred HHHHHHHH----HHHHHHHHHHHHHHHhCCcEEEEeEEEEec-----CCEEEEE--ccC-----CceEEEEeCeEEEccC
Q 010573 122 PAMMAQKD----KAVSNLTRGIEGLFKKNKVTYVKGYGKFIS-----PSEVSVD--TIE-----GGNTVVKGKNIIIATG 185 (507)
Q Consensus 122 ~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d-----~~~~~v~--~~~-----g~~~~~~~d~lvlAtG 185 (507)
........ -....+...+.+...+.|++++.+++..+. .....+. ..+ |+..++.+|.||.|+|
T Consensus 78 ~~~~~~~~~~~~v~R~~~d~~L~~~a~~~G~~v~~~~~~~i~~~~~~~~~~~v~~~~~~~~~~~g~~~~i~a~~VIgADG 157 (398)
T TIGR02028 78 GRTLKEHEYIGMLRREVLDSFLRRRAADAGATLINGLVTKLSLPADADDPYTLHYISSDSGGPSGTRCTLEVDAVIGADG 157 (398)
T ss_pred ccCCCCCCceeeeeHHHHHHHHHHHHHHCCcEEEcceEEEEEeccCCCceEEEEEeeccccccCCCccEEEeCEEEECCC
Confidence 10000000 001223334455566789999888754431 1223333 222 4446899999999999
Q ss_pred CCC
Q 010573 186 SDV 188 (507)
Q Consensus 186 ~~p 188 (507)
...
T Consensus 158 ~~S 160 (398)
T TIGR02028 158 ANS 160 (398)
T ss_pred cch
Confidence 876
No 136
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=98.96 E-value=9.5e-08 Score=96.69 Aligned_cols=61 Identities=26% Similarity=0.391 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+...+.+.+++.|++++.+++|++++.+++.+.+.+.+..+.++.++.+|.||+|+|...
T Consensus 198 ~~~~~l~~~a~~~G~~i~~~~~V~~i~~~~~~~~v~~~~~~~~~~~~i~a~~vV~a~G~~s 258 (410)
T PRK12409 198 KFTTGLAAACARLGVQFRYGQEVTSIKTDGGGVVLTVQPSAEHPSRTLEFDGVVVCAGVGS 258 (410)
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCccceEecCEEEECCCcCh
Confidence 4556677888889999999999999987777776655421110124789999999999653
No 137
>TIGR00292 thiazole biosynthesis enzyme. This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine.This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis.
Probab=98.94 E-value=1.1e-08 Score=95.17 Aligned_cols=41 Identities=41% Similarity=0.699 Sum_probs=37.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
.++||+||||||||++||+.|++.|++|+|+||+..+||..
T Consensus 20 ~~~DVvIVGgGpAGL~aA~~la~~G~~V~vlEk~~~~Ggg~ 60 (254)
T TIGR00292 20 AESDVIIVGAGPSGLTAAYYLAKNGLKVCVLERSLAFGGGS 60 (254)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCccc
Confidence 46899999999999999999999999999999998887553
No 138
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
Probab=98.91 E-value=7.1e-09 Score=104.04 Aligned_cols=145 Identities=22% Similarity=0.267 Sum_probs=77.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHH-HHhhhhhCCccc--Cccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHE-AMHSFASHGVKF--SSVE 118 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~g~~~--~~~~ 118 (507)
.+|||+||||||||.+||+.|++.|++|+|+||.+.+|......+.+....+......... +.......-+.. ....
T Consensus 2 ~~~DVvIVGaGPAGs~aA~~la~~G~~VlvlEk~~~~G~k~~~~~~~~~~~l~~l~~~~~~~i~~~v~~~~~~~~~~~~~ 81 (396)
T COG0644 2 MEYDVVIVGAGPAGSSAARRLAKAGLDVLVLEKGSEPGAKPCCGGGLSPRALEELIPDFDEEIERKVTGARIYFPGEKVA 81 (396)
T ss_pred ceeeEEEECCchHHHHHHHHHHHcCCeEEEEecCCCCCCCccccceechhhHHHhCCCcchhhheeeeeeEEEecCCceE
Confidence 3589999999999999999999999999999998888864333221111111000000000 000000000000 0000
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCC
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
+.... ....--....+.+++.+..++.|++++.++ +..+ +...+.+....+. .++.++.+|.|+|...
T Consensus 82 ~~~~~-~~~y~v~R~~fd~~La~~A~~aGae~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~a~~vI~AdG~~s 152 (396)
T COG0644 82 IEVPV-GEGYIVDRAKFDKWLAERAEEAGAELYPGTRVTGVIREDDGVVVGVRAGD-DEVRAKVVIDADGVNS 152 (396)
T ss_pred EecCC-CceEEEEhHHhhHHHHHHHHHcCCEEEeceEEEEEEEeCCcEEEEEEcCC-EEEEcCEEEECCCcch
Confidence 00000 000000012334456677788899999875 3322 3333333332221 7899999999999865
No 139
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family.; InterPro: IPR003953 In bacteria two distinct, membrane-bound, enzyme complexes are responsible for the interconversion of fumarate and succinate (1.3.99.1 from EC): fumarate reductase (Frd) is used in anaerobic growth, and succinate dehydrogenase (Sdh) is used in aerobic growth. Both complexes consist of two main components: a membrane-extrinsic component composed of a FAD-binding flavoprotein and an iron-sulphur protein; and an hydrophobic component composed of a membrane anchor protein and/or a cytochrome B. In eukaryotes mitochondrial succinate dehydrogenase (ubiquinone) (1.3.5.1 from EC) is an enzyme composed of two subunits: a FAD flavoprotein and and iron-sulphur protein. The flavoprotein subunit is a protein of about 60 to 70 Kd to which FAD is covalently bound to a histidine residue which is located in the N-terminal section of the protein []. The sequence around that histidine is well conserved in Frd and Sdh from various bacterial and eukaryotic species []. This family includes members that bind FAD such as the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase. ; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2BS4_A 2BS3_A 2BS2_A 1E7P_J 1QLB_A 1KNR_A 1KNP_A 1CHU_A 2E5V_A 3AEF_A ....
Probab=98.88 E-value=8.3e-08 Score=97.35 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
...+...+.+.+++.|++++++++++++..+++.+. +.+.+..++....+.++.||+|+|--..
T Consensus 140 g~~~~~~l~~~~~~~gv~i~~~~~~~~Li~e~g~V~Gv~~~~~~~g~~~~i~A~aVIlAtGG~~~ 204 (417)
T PF00890_consen 140 GKALIEALAKAAEEAGVDIRFNTRVTDLITEDGRVTGVVAENPADGEFVRIKAKAVILATGGFGG 204 (417)
T ss_dssp HHHHHHHHHHHHHHTTEEEEESEEEEEEEEETTEEEEEEEEETTTCEEEEEEESEEEE----BGG
T ss_pred HHHHHHHHHHHHhhcCeeeeccceeeeEEEeCCceeEEEEEECCCCeEEEEeeeEEEeccCcccc
Confidence 346777888899999999999999999988877765 6665455566668899999999996554
No 140
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=98.88 E-value=9.3e-08 Score=96.07 Aligned_cols=56 Identities=16% Similarity=0.238 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+.+.+.+.+++.|++++.+++|+.++.+++++.+.+. ++ ++.+|.||+|+|...
T Consensus 149 ~~l~~aL~~~~~~~Gv~i~~~~~V~~i~~~~~~~~V~~~-----~g-~i~ad~vV~A~G~~s 204 (393)
T PRK11728 149 RAVAEAMAELIQARGGEIRLGAEVTALDEHANGVVVRTT-----QG-EYEARTLINCAGLMS 204 (393)
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEecCCeEEEEEC-----CC-EEEeCEEEECCCcch
Confidence 467778888888999999999999999877777666543 23 799999999999865
No 141
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=98.87 E-value=1.6e-07 Score=93.06 Aligned_cols=59 Identities=17% Similarity=0.285 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
...+.+.+.+.+++.|++++.+++|+++..+++++. |.+. +++ +.+|.||+|+|.....
T Consensus 146 ~~~l~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~gv~~~-----~g~-i~ad~vV~a~G~~s~~ 205 (358)
T PF01266_consen 146 PRRLIQALAAEAQRAGVEIRTGTEVTSIDVDGGRVTGVRTS-----DGE-IRADRVVLAAGAWSPQ 205 (358)
T ss_dssp HHHHHHHHHHHHHHTT-EEEESEEEEEEEEETTEEEEEEET-----TEE-EEECEEEE--GGGHHH
T ss_pred ccchhhhhHHHHHHhhhhccccccccchhhccccccccccc-----ccc-cccceeEeccccccee
Confidence 356778888888999999999999999999998887 7765 555 9999999999976543
No 142
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=98.86 E-value=9.7e-08 Score=96.01 Aligned_cols=58 Identities=19% Similarity=0.328 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+++.|++++.++++++++.+++++.+++. +++++.+|.||.|.|..+..
T Consensus 114 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~a~~vV~AdG~~S~v 171 (392)
T PRK08773 114 LLVDRLWAALHAAGVQLHCPARVVALEQDADRVRLRLD-----DGRRLEAALAIAADGAASTL 171 (392)
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecCCeEEEEEC-----CCCEEEeCEEEEecCCCchH
Confidence 55666777788889999999999999888888877764 34579999999999998854
No 143
>TIGR01790 carotene-cycl lycopene cyclase family protein. This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Probab=98.85 E-value=1.6e-08 Score=101.54 Aligned_cols=136 Identities=21% Similarity=0.284 Sum_probs=75.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHH-hhhhh-CCcccCccccChH
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFAS-HGVKFSSVEVDLP 122 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~-~g~~~~~~~~~~~ 122 (507)
||+||||||||+++|..|++.|++|+|||+++..|+.+.+ ++.+ ..+.... ..... ..... ..+..........
T Consensus 1 DviIiGaG~AGl~~A~~la~~g~~v~liE~~~~~~~~~~~-~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (388)
T TIGR01790 1 DLAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHTY-GVWD-DDLSDLG--LADCVEHVWPDVYEYRFPKQPRKLG 76 (388)
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEccCCCCCCCccc-cccH-hhhhhhc--hhhHHhhcCCCceEEecCCcchhcC
Confidence 7999999999999999999999999999998777764321 1111 0110000 01111 10000 0000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEec---CCEEEEEccCCceEEEEeCeEEEccCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS---PSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d---~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
. .+..-....+...+.+.+.+.+++++.+.+..+. .....+.+.+| .++.+|.||.|+|..+
T Consensus 77 ~--~~~~i~~~~l~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~v~~~~g--~~~~a~~VI~A~G~~s 141 (388)
T TIGR01790 77 T--AYGSVDSTRLHEELLQKCPEGGVLWLERKAIHAEADGVALSTVYCAGG--QRIQARLVIDARGFGP 141 (388)
T ss_pred C--ceeEEcHHHHHHHHHHHHHhcCcEEEccEEEEEEecCCceeEEEeCCC--CEEEeCEEEECCCCch
Confidence 0 0000001233344445556668888877665543 33455666666 6899999999999876
No 144
>PLN02463 lycopene beta cyclase
Probab=98.85 E-value=3e-08 Score=100.03 Aligned_cols=139 Identities=19% Similarity=0.177 Sum_probs=75.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCc---
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS--- 116 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~--- 116 (507)
....|||+||||||||+++|..|++.|++|+|+|+.+... +.+..++-...+... ...+..........+...+
T Consensus 25 ~~~~~DVvIVGaGpAGLalA~~La~~Gl~V~liE~~~~~~--~p~~~g~w~~~l~~l-gl~~~l~~~w~~~~v~~~~~~~ 101 (447)
T PLN02463 25 KSRVVDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPSPLSI--WPNNYGVWVDEFEAL-GLLDCLDTTWPGAVVYIDDGKK 101 (447)
T ss_pred cccCceEEEECCCHHHHHHHHHHHHCCCeEEEeccCccch--hccccchHHHHHHHC-CcHHHHHhhCCCcEEEEeCCCC
Confidence 3456899999999999999999999999999999964321 111001000000000 0000010000000000000
Q ss_pred --cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 117 --VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 117 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
....+..+ ....+...+.+.+...+++++.+++..+ +.....|.+++| .++.+|.||.|+|....
T Consensus 102 ~~~~~~y~~V------~R~~L~~~Ll~~~~~~GV~~~~~~V~~I~~~~~~~~V~~~dG--~~i~A~lVI~AdG~~s~ 170 (447)
T PLN02463 102 KDLDRPYGRV------NRKKLKSKMLERCIANGVQFHQAKVKKVVHEESKSLVVCDDG--VKIQASLVLDATGFSRC 170 (447)
T ss_pred ccccCcceeE------EHHHHHHHHHHHHhhcCCEEEeeEEEEEEEcCCeEEEEECCC--CEEEcCEEEECcCCCcC
Confidence 00011000 0122333344445567899877666544 344566777777 68999999999998754
No 145
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=98.84 E-value=1.4e-07 Score=98.25 Aligned_cols=56 Identities=32% Similarity=0.589 Sum_probs=49.1
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc---ccchhhhhh
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG---CIPSKALLH 95 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~---~~p~~~~~~ 95 (507)
....++||||||+| +|++||..+++.|.+|+||||.+.+||+|...+ |+|.+.+..
T Consensus 12 ~~d~e~DvvvvG~G-~G~~aA~~a~~~G~~v~v~Ek~~~~GG~~~~~gG~~~~~~~~~~~ 70 (564)
T PRK12845 12 VRDTTVDLLVVGSG-TGMAAALAAHELGLSVLIVEKSSYVGGSTARSGGAFWLPASPVLD 70 (564)
T ss_pred CCCceeCEEEECCc-HHHHHHHHHHHCCCcEEEEecCCCCcCcccCcCCCEecCChHHHH
Confidence 34457999999999 899999999999999999999989999999988 788765543
No 146
>PRK06481 fumarate reductase flavoprotein subunit; Validated
Probab=98.84 E-value=3.3e-08 Score=102.22 Aligned_cols=41 Identities=37% Similarity=0.644 Sum_probs=37.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
.++||||||+|.||++||+.+++.|.+|+||||....||..
T Consensus 60 ~~~DVvVVG~G~AGl~AAi~Aa~~Ga~VivlEK~~~~GG~s 100 (506)
T PRK06481 60 DKYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNT 100 (506)
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 46899999999999999999999999999999988888754
No 147
>PLN00093 geranylgeranyl diphosphate reductase; Provisional
Probab=98.83 E-value=3.5e-08 Score=100.10 Aligned_cols=36 Identities=42% Similarity=0.553 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
..+|||+||||||||.+||..|++.|++|+|+|+..
T Consensus 37 ~~~~DViIVGaGPAG~~aA~~LA~~G~~VlllEr~~ 72 (450)
T PLN00093 37 GRKLRVAVIGGGPAGACAAETLAKGGIETFLIERKL 72 (450)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 346899999999999999999999999999999964
No 148
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=98.83 E-value=2.7e-07 Score=92.43 Aligned_cols=55 Identities=20% Similarity=0.162 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+...+.+.+++.|++++.+++|++++.+++.+.+.+. + .++.+|.||+|+|...
T Consensus 146 ~~~~~l~~~~~~~g~~~~~~~~V~~i~~~~~~~~v~~~-----~-~~i~a~~vV~aaG~~~ 200 (380)
T TIGR01377 146 KALRALQELAEAHGATVRDGTKVVEIEPTELLVTVKTT-----K-GSYQANKLVVTAGAWT 200 (380)
T ss_pred HHHHHHHHHHHHcCCEEECCCeEEEEEecCCeEEEEeC-----C-CEEEeCEEEEecCcch
Confidence 45666777788899999999999999877777766543 2 3799999999999653
No 149
>PRK08163 salicylate hydroxylase; Provisional
Probab=98.82 E-value=1.5e-07 Score=94.78 Aligned_cols=57 Identities=21% Similarity=0.349 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 257 IRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 257 ~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+.+.+.+.+.+. +++++.++.+++++.+++++.+++. +++++.+|.||.|.|.....
T Consensus 111 l~~~L~~~~~~~~~v~~~~~~~v~~i~~~~~~v~v~~~-----~g~~~~ad~vV~AdG~~S~~ 168 (396)
T PRK08163 111 IHLSLLEAVLDHPLVEFRTSTHVVGIEQDGDGVTVFDQ-----QGNRWTGDALIGCDGVKSVV 168 (396)
T ss_pred HHHHHHHHHHhcCCcEEEeCCEEEEEecCCCceEEEEc-----CCCEEecCEEEECCCcChHH
Confidence 445556666555 5999999999999877777777764 45679999999999987655
No 150
>PRK06847 hypothetical protein; Provisional
Probab=98.82 E-value=7.6e-08 Score=96.22 Aligned_cols=60 Identities=18% Similarity=0.228 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+++.+.+.+.+++.|++++.++++++++.+++++.+.+. +++++.+|.||.|+|..+...
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~v~~~-----~g~~~~ad~vI~AdG~~s~~r 166 (375)
T PRK06847 107 PALARILADAARAAGADVRLGTTVTAIEQDDDGVTVTFS-----DGTTGRYDLVVGADGLYSKVR 166 (375)
T ss_pred HHHHHHHHHHHHHhCCEEEeCCEEEEEEEcCCEEEEEEc-----CCCEEEcCEEEECcCCCcchh
Confidence 456677778888889999999999999887777777764 456899999999999887653
No 151
>PLN02661 Putative thiazole synthesis
Probab=98.82 E-value=3.2e-08 Score=94.71 Aligned_cols=136 Identities=19% Similarity=0.274 Sum_probs=75.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.++||+|||||++|++||+.|++. |++|+|||+...+||.+...+......+... ...+.+.+.|+.++.. -+
T Consensus 91 ~~~DVlIVGaG~AGl~AA~~La~~~g~kV~viEk~~~~GGG~~~gg~l~~~~vv~~-----~a~e~LeElGV~fd~~-dg 164 (357)
T PLN02661 91 ADTDVVIVGAGSAGLSCAYELSKNPNVKVAIIEQSVSPGGGAWLGGQLFSAMVVRK-----PAHLFLDELGVPYDEQ-EN 164 (357)
T ss_pred ccCCEEEECCHHHHHHHHHHHHHcCCCeEEEEecCcccccceeeCccccccccccc-----HHHHHHHHcCCCcccC-CC
Confidence 368999999999999999999986 8999999998888764332222111111111 1123356667766432 01
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHhCCcEEEEeEE-EE--ecCCEE-EEE------ccCC------ceEEEEeCeEEEc
Q 010573 121 LPAMMAQKDKAVSNLTR-GIEGLFKKNKVTYVKGYG-KF--ISPSEV-SVD------TIEG------GNTVVKGKNIIIA 183 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~--~d~~~~-~v~------~~~g------~~~~~~~d~lvlA 183 (507)
+... .+. ..+.. ......++.+++++.+.. .. .+...+ -+. ..++ +...+.++++|+|
T Consensus 165 y~vv-~ha----~e~~stLi~ka~~~~gVkI~~~t~V~DLI~~~grVaGVVvnw~~v~~~~~~~s~~dp~~I~AkaVVlA 239 (357)
T PLN02661 165 YVVI-KHA----ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGDRVGGVVTNWALVAQNHDTQSCMDPNVMEAKVVVSS 239 (357)
T ss_pred eeEe-cch----HHHHHHHHHHHHhcCCCEEEeCeEeeeEEecCCEEEEEEeecchhhhccCCCCccceeEEECCEEEEc
Confidence 0000 010 11111 222344567899888743 22 222221 111 1111 1246899999999
Q ss_pred cCCCC
Q 010573 184 TGSDV 188 (507)
Q Consensus 184 tG~~p 188 (507)
||...
T Consensus 240 TGh~g 244 (357)
T PLN02661 240 CGHDG 244 (357)
T ss_pred CCCCC
Confidence 99654
No 152
>TIGR00275 flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae.
Probab=98.81 E-value=8.7e-08 Score=96.08 Aligned_cols=57 Identities=16% Similarity=0.298 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..++.+.+.+.+++.|++++.++.+++++.+++.+.+++ ++.++.+|.||+|+|...
T Consensus 104 a~~v~~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~~v~~------~~~~i~ad~VIlAtG~~s 160 (400)
T TIGR00275 104 AADVLDALLNELKELGVEILTNSKVKSIKKDDNGFGVET------SGGEYEADKVILATGGLS 160 (400)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEecCCeEEEEE------CCcEEEcCEEEECCCCcc
Confidence 356777888888899999999999999977666666554 234789999999999754
No 153
>PRK10157 putative oxidoreductase FixC; Provisional
Probab=98.81 E-value=6.7e-08 Score=97.88 Aligned_cols=39 Identities=33% Similarity=0.523 Sum_probs=35.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGG 80 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 80 (507)
.+|||+||||||||++||+.|++.|++|+|+||.+.+|.
T Consensus 4 ~~~DViIVGaGpAG~~aA~~La~~G~~V~llEr~~~~g~ 42 (428)
T PRK10157 4 DIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGA 42 (428)
T ss_pred ccCcEEEECcCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Confidence 359999999999999999999999999999999876654
No 154
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]
Probab=98.80 E-value=6.9e-08 Score=99.49 Aligned_cols=39 Identities=49% Similarity=0.605 Sum_probs=35.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
..++||||||||.||+.||..++++|.+|+|+||....+
T Consensus 4 ~~~~DvvVIG~G~AGl~AAi~aa~~g~~V~l~~K~~~~r 42 (562)
T COG1053 4 IHEFDVVVIGGGGAGLRAAIEAAEAGLKVALLSKAPPKR 42 (562)
T ss_pred cccCCEEEECCcHHHHHHHHHHHhcCCcEEEEEccccCC
Confidence 456899999999999999999999999999999976554
No 155
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=98.78 E-value=6.6e-09 Score=105.11 Aligned_cols=138 Identities=28% Similarity=0.344 Sum_probs=41.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhh----hhhHHHHHHHhhhhhCCcccCccccC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALL----HSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
||||||||+||++||+.+++.|++|+|||+.+.+||.....+..+..... .....+..+.+.+...+-........
T Consensus 1 DVVVvGgG~aG~~AAi~AAr~G~~VlLiE~~~~lGG~~t~~~~~~~~~~~~~~~~~~gi~~e~~~~~~~~~~~~~~~~~~ 80 (428)
T PF12831_consen 1 DVVVVGGGPAGVAAAIAAARAGAKVLLIEKGGFLGGMATSGGVSPFDGNHDEDQVIGGIFREFLNRLRARGGYPQEDRYG 80 (428)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTS-EEEE-SSSSSTGGGGGSSS-EETTEEHHHHHHHHHHHHHHHST-------------
T ss_pred CEEEECccHHHHHHHHHHHHCCCEEEEEECCccCCCcceECCcCChhhcchhhccCCCHHHHHHHHHhhhcccccccccc
Confidence 89999999999999999999999999999999999987665543322111 12222333333332211100000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCE---EEEEccCCceEEEEeCeEEEccCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSE---VSVDTIEGGNTVVKGKNIIIATGS 186 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~---~~v~~~~g~~~~~~~d~lvlAtG~ 186 (507)
+..... -....+...+.+++.+.+++++.++ +..+ +..+ +.+....| ..++.++.+|-|||-
T Consensus 81 ~~~~~~---~~~~~~~~~l~~~l~e~gv~v~~~t~v~~v~~~~~~i~~V~~~~~~g-~~~i~A~~~IDaTG~ 148 (428)
T PF12831_consen 81 WVSNVP---FDPEVFKAVLDEMLAEAGVEVLLGTRVVDVIRDGGRITGVIVETKSG-RKEIRAKVFIDATGD 148 (428)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cccccc---ccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccc
Confidence 100000 0012223345566777899998885 3332 3222 22333333 688999999999994
No 156
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria. Though its precise molecular function of these proteins is not known, it is involved in the 5-carboxymethylaminomethyl modification of the wobble uridine base in some tRNAs [, ]. Sequence variations in the human mitochondrial protein may influence the severity of aminoglycoside-induced deafness []. This entry is found in GidA and related proteins, such as the methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase enzyme TrmFO.; GO: 0050660 flavin adenine dinucleotide binding, 0008033 tRNA processing; PDB: 3CES_C 3CP2_A 3G05_A 2CUL_A 3CP8_A 2ZXI_B 2ZXH_A 3G5S_A 3G5R_A 3G5Q_A.
Probab=98.78 E-value=1.3e-08 Score=98.99 Aligned_cols=125 Identities=26% Similarity=0.452 Sum_probs=71.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEe-cCCCCCceeccccccchhhhhhhhHHHHHHHh-------hhhhCCc----
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIE-KRGALGGTCLNVGCIPSKALLHSSHMYHEAMH-------SFASHGV---- 112 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie-~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~g~---- 112 (507)
||+|||||.||..||+.+++.|.+|+|+. +.+.+| ..+|.|+..-....+...++.. .....++
T Consensus 1 DViVVGgG~AG~eAA~aaAr~G~~V~Lit~~~d~i~----~~~Cnpsigg~~kg~L~~Eidalgg~m~~~aD~~~i~~~~ 76 (392)
T PF01134_consen 1 DVIVVGGGHAGCEAALAAARMGAKVLLITHNTDTIG----EMSCNPSIGGIAKGHLVREIDALGGLMGRAADETGIHFRM 76 (392)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT--EEEEES-GGGTT------SSSSEEESTTHHHHHHHHHHTT-SHHHHHHHHEEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeecccccc----cccchhhhccccccchhHHHhhhhhHHHHHHhHhhhhhhc
Confidence 79999999999999999999999999993 333333 3456554322222222222211 1111122
Q ss_pred -------ccCcc--ccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEec--CC-EEEEEccCCceEEEEeCe
Q 010573 113 -------KFSSV--EVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFIS--PS-EVSVDTIEGGNTVVKGKN 179 (507)
Q Consensus 113 -------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~d--~~-~~~v~~~~g~~~~~~~d~ 179 (507)
....+ .+|- ..+...+.+.+++ .+++++.+++..+. .. -.-|.+.+| ..+.+|.
T Consensus 77 lN~skGpav~a~r~qvDr-----------~~y~~~~~~~l~~~~nl~i~~~~V~~l~~e~~~v~GV~~~~g--~~~~a~~ 143 (392)
T PF01134_consen 77 LNRSKGPAVHALRAQVDR-----------DKYSRAMREKLESHPNLTIIQGEVTDLIVENGKVKGVVTKDG--EEIEADA 143 (392)
T ss_dssp ESTTS-GGCTEEEEEE-H-----------HHHHHHHHHHHHTSTTEEEEES-EEEEEECTTEEEEEEETTS--EEEEECE
T ss_pred ccccCCCCccchHhhccH-----------HHHHHHHHHHHhcCCCeEEEEcccceEEecCCeEEEEEeCCC--CEEecCE
Confidence 11111 1221 2233344455554 68999988876652 33 345677787 7899999
Q ss_pred EEEccCC
Q 010573 180 IIIATGS 186 (507)
Q Consensus 180 lvlAtG~ 186 (507)
+|+|||.
T Consensus 144 vVlaTGt 150 (392)
T PF01134_consen 144 VVLATGT 150 (392)
T ss_dssp EEE-TTT
T ss_pred EEEeccc
Confidence 9999998
No 157
>PRK08274 tricarballylate dehydrogenase; Validated
Probab=98.78 E-value=3.1e-07 Score=94.52 Aligned_cols=60 Identities=18% Similarity=0.261 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
..+...+.+.+++.|++++.+++++++..+++.+. +.+. ..++....+.++.||+|+|-.
T Consensus 131 ~~l~~~l~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~-~~~g~~~~i~a~~VIlAtGg~ 191 (466)
T PRK08274 131 KALVNALYRSAERLGVEIRYDAPVTALELDDGRFVGARAG-SAAGGAERIRAKAVVLAAGGF 191 (466)
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEecCCeEEEEEEE-ccCCceEEEECCEEEECCCCC
Confidence 45677788888899999999999999987666554 4332 123345678999999999843
No 158
>PRK10015 oxidoreductase; Provisional
Probab=98.78 E-value=1.4e-07 Score=95.48 Aligned_cols=38 Identities=39% Similarity=0.626 Sum_probs=34.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
.+|||+||||||||++||+.|++.|++|+||||.+.+|
T Consensus 4 ~~~DViIVGgGpAG~~aA~~LA~~G~~VlliEr~~~~g 41 (429)
T PRK10015 4 DKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAG 41 (429)
T ss_pred cccCEEEECcCHHHHHHHHHHHhCCCeEEEEecCCCCC
Confidence 45999999999999999999999999999999976554
No 159
>TIGR00136 gidA glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137).
Probab=98.78 E-value=3.8e-08 Score=100.84 Aligned_cols=140 Identities=22% Similarity=0.321 Sum_probs=76.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHH-------hhhhhCCcccCc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-------HSFASHGVKFSS 116 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-------~~~~~~g~~~~~ 116 (507)
|||+|||||+||+.||..+++.|.+|+|+|++...+|.| +|.|+..-.....+.+.+. ......++.+..
T Consensus 1 yDViVIGaG~AGl~aA~ala~~G~~v~Lie~~~~~~g~~---~c~ps~gG~a~g~l~rEidaLGG~~~~~~d~~~i~~r~ 77 (617)
T TIGR00136 1 FDVIVIGGGHAGCEAALAAARMGAKTLLLTLNLDTIGKC---SCNPAIGGPAKGILVKEIDALGGLMGKAADKAGLQFRV 77 (617)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCEEEEecccccccCC---CccccccccccchhhhhhhcccchHHHHHHhhceehee
Confidence 699999999999999999999999999999965444433 3444332211221111110 000111111110
Q ss_pred cccChHH-H-HHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEe--c--CCEEEEEccCCceEEEEeCeEEEccCCCC
Q 010573 117 VEVDLPA-M-MAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFI--S--PSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 117 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~--d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
....... . ..+..-....+...+.+.+++. +++++.+.+..+ + .....|.+.+| ..+.+|.||+|||...
T Consensus 78 ln~skgpAV~~~RaQVDr~~y~~~L~e~Le~~pgV~Ile~~Vv~li~e~~g~V~GV~t~~G--~~I~Ad~VILATGtfL 154 (617)
T TIGR00136 78 LNSSKGPAVRATRAQIDKVLYRKAMRNALENQPNLSLFQGEVEDLILEDNDEIKGVVTQDG--LKFRAKAVIITTGTFL 154 (617)
T ss_pred cccCCCCcccccHHhCCHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEecCCcEEEEEECCC--CEEECCEEEEccCccc
Confidence 0000000 0 0000000122334444555555 889988876554 2 23345667777 5899999999999764
No 160
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (PFAM:PF00070).
Probab=98.77 E-value=1e-07 Score=92.13 Aligned_cols=99 Identities=22% Similarity=0.344 Sum_probs=80.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc---c--------CCCC-----CHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD---I--------VPSM-----DGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------~~~~-----d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
+++|||+|+.|+++|..|.+.|.+|+++++.+. + .|.+ +.++...+.+.+++.|+++++ +.++
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~ 80 (300)
T TIGR01292 2 DVIIIGAGPAGLTAAIYAARANLKTLIIEGMEPGGQLTTTTEVENYPGFPEGISGPELMEKMKEQAVKFGAEIIY-EEVI 80 (300)
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCcceeecccccccCCCCCCCChHHHHHHHHHHHHHcCCeEEE-EEEE
Confidence 589999999999999999999999999997651 1 1222 257778888889999999998 8999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.++.+++.+.+++. ++.++.+|.+|+|+|.+|+...
T Consensus 81 ~v~~~~~~~~v~~~-----~~~~~~~d~liiAtG~~~~~~~ 116 (300)
T TIGR01292 81 KVDLSDRPFKVKTG-----DGKEYTAKAVIIATGASARKLG 116 (300)
T ss_pred EEEecCCeeEEEeC-----CCCEEEeCEEEECCCCCcccCC
Confidence 99877766666653 3468999999999999987654
No 161
>PRK06184 hypothetical protein; Provisional
Probab=98.77 E-value=3e-07 Score=95.41 Aligned_cols=59 Identities=15% Similarity=0.302 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+.+.+.+.+.+.|++++.++++++++.+++++.+++... ++++++.+|.||.|.|....
T Consensus 111 le~~L~~~l~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~--~~~~~i~a~~vVgADG~~S~ 169 (502)
T PRK06184 111 TERILRERLAELGHRVEFGCELVGFEQDADGVTARVAGP--AGEETVRARYLVGADGGRSF 169 (502)
T ss_pred HHHHHHHHHHHCCCEEEeCcEEEEEEEcCCcEEEEEEeC--CCeEEEEeCEEEECCCCchH
Confidence 455677777888999999999999988888888777432 24568999999999997753
No 162
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=98.75 E-value=1e-07 Score=90.90 Aligned_cols=99 Identities=18% Similarity=0.328 Sum_probs=82.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCC-------------------------------------C---
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSM-------------------------------------D--- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-------------------------------------d--- 254 (507)
..|+|||+|+.|+-+|..+++.|.+|+++++.+.+.+.+ +
T Consensus 4 ~dviIIGgGpAGlMaA~~aa~~G~~V~lid~~~k~GrKil~sGgGrCN~Tn~~~~~~~ls~~p~~~~fl~sal~~ft~~d 83 (408)
T COG2081 4 FDVIIIGGGPAGLMAAISAAKAGRRVLLIDKGPKLGRKILMSGGGRCNFTNSEAPDEFLSRNPGNGHFLKSALARFTPED 83 (408)
T ss_pred ceEEEECCCHHHHHHHHHHhhcCCEEEEEecCccccceeEecCCCCccccccccHHHHHHhCCCcchHHHHHHHhCCHHH
Confidence 469999999999999999999999999999888764210 0
Q ss_pred ---------------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCE
Q 010573 255 ---------------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADV 307 (507)
Q Consensus 255 ---------------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~ 307 (507)
..+.+.+.+.+++.||+++++++|.+++.++.+..+.+. +++++.||.
T Consensus 84 ~i~~~e~~Gi~~~e~~~Gr~Fp~sdkA~~Iv~~ll~~~~~~gV~i~~~~~v~~v~~~~~~f~l~t~-----~g~~i~~d~ 158 (408)
T COG2081 84 FIDWVEGLGIALKEEDLGRMFPDSDKASPIVDALLKELEALGVTIRTRSRVSSVEKDDSGFRLDTS-----SGETVKCDS 158 (408)
T ss_pred HHHHHHhcCCeeEEccCceecCCccchHHHHHHHHHHHHHcCcEEEecceEEeEEecCceEEEEcC-----CCCEEEccE
Confidence 356677788999999999999999999988877777764 556899999
Q ss_pred EEEeec--CCCCC
Q 010573 308 VLVSAG--RTPFT 318 (507)
Q Consensus 308 vi~a~G--~~p~~ 318 (507)
+|+|+| ..|.+
T Consensus 159 lilAtGG~S~P~l 171 (408)
T COG2081 159 LILATGGKSWPKL 171 (408)
T ss_pred EEEecCCcCCCCC
Confidence 999999 55543
No 163
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=98.75 E-value=1.1e-07 Score=91.53 Aligned_cols=37 Identities=41% Similarity=0.561 Sum_probs=34.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGG 80 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 80 (507)
|||+|||||++|+++|+.|++.|.+|+|+|+....+.
T Consensus 1 ~dv~IiGaG~aGl~~A~~l~~~g~~v~vie~~~~~~~ 37 (295)
T TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRY 37 (295)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCc
Confidence 6999999999999999999999999999999776543
No 164
>TIGR02023 BchP-ChlP geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).
Probab=98.75 E-value=6e-08 Score=97.24 Aligned_cols=32 Identities=47% Similarity=0.725 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
|||+||||||||+++|+.|++.|++|+|+|+.
T Consensus 1 yDVvIVGaGpAG~~aA~~La~~G~~V~l~E~~ 32 (388)
T TIGR02023 1 YDVAVIGGGPSGATAAETLARAGIETILLERA 32 (388)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 79999999999999999999999999999996
No 165
>PRK06834 hypothetical protein; Provisional
Probab=98.75 E-value=7.5e-08 Score=98.96 Aligned_cols=144 Identities=17% Similarity=0.235 Sum_probs=77.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhh--hhhhhHHHHHHHhhhhhCC-cccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKA--LLHSSHMYHEAMHSFASHG-VKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~g-~~~~~~~~ 119 (507)
.+||+||||||+|+++|..|++.|++|+|||+.+.....-....++.... ++.....+..+........ ..+....+
T Consensus 3 ~~dVlIVGaGp~Gl~lA~~La~~G~~v~vlEr~~~~~~~~~Ra~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~ 82 (488)
T PRK06834 3 EHAVVIAGGGPTGLMLAGELALAGVDVAIVERRPNQELVGSRAGGLHARTLEVLDQRGIADRFLAQGQVAQVTGFAATRL 82 (488)
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCCCcceeeECHHHHHHHHHcCcHHHHHhcCCccccceeeeEec
Confidence 48999999999999999999999999999999764210001111222211 1111111222211000000 00000001
Q ss_pred ChHHHHH---HH-HHHHHHHHHHHHHHHHhCCcEEEEeE-EEE--ecCCEEEEEccCCceEEEEeCeEEEccCCCC
Q 010573 120 DLPAMMA---QK-DKAVSNLTRGIEGLFKKNKVTYVKGY-GKF--ISPSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 120 ~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~--~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
++..+.. .. .-....+...+.+.+++.+++++.+. +.. .+.+.+.+.+.+| .++.+|+||.|.|...
T Consensus 83 ~~~~~~~~~~~~~~i~q~~le~~L~~~l~~~gv~i~~~~~v~~v~~~~~~v~v~~~~g--~~i~a~~vVgADG~~S 156 (488)
T PRK06834 83 DISDFPTRHNYGLALWQNHIERILAEWVGELGVPIYRGREVTGFAQDDTGVDVELSDG--RTLRAQYLVGCDGGRS 156 (488)
T ss_pred ccccCCCCCCccccccHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEcCCeEEEEECCC--CEEEeCEEEEecCCCC
Confidence 1100000 00 00012233445556667789988774 333 3556677777666 5799999999999876
No 166
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=98.74 E-value=5.3e-07 Score=90.17 Aligned_cols=56 Identities=25% Similarity=0.329 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+.+.|++++.+++|++++.+++++.++.. ++ ++.+|.||+|+|...
T Consensus 149 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~-----~g-~~~a~~vV~A~G~~~ 204 (376)
T PRK11259 149 ELAIKAHLRLAREAGAELLFNEPVTAIEADGDGVTVTTA-----DG-TYEAKKLVVSAGAWV 204 (376)
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEeeCCeEEEEeC-----CC-EEEeeEEEEecCcch
Confidence 345555666777889999999999999887777666643 33 789999999999753
No 167
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=98.74 E-value=3e-07 Score=92.93 Aligned_cols=58 Identities=19% Similarity=0.311 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+++.|++++.++++++++.+++++.+++. +++++.+|.||.|.|.....
T Consensus 113 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~-----~g~~~~a~~vVgAdG~~S~v 170 (405)
T PRK05714 113 VVQDALLERLHDSDIGLLANARLEQMRRSGDDWLLTLA-----DGRQLRAPLVVAADGANSAV 170 (405)
T ss_pred HHHHHHHHHHhcCCCEEEcCCEEEEEEEcCCeEEEEEC-----CCCEEEeCEEEEecCCCchh
Confidence 34556666777789999999999999888888887765 45689999999999987654
No 168
>PRK09126 hypothetical protein; Provisional
Probab=98.72 E-value=3.9e-07 Score=91.64 Aligned_cols=49 Identities=22% Similarity=0.370 Sum_probs=40.6
Q ss_pred HhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 266 EKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 266 ~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+..|++++.++++++++.+++.+.+++. +++++.+|.||.|.|..+...
T Consensus 122 ~~~g~~i~~~~~v~~~~~~~~~~~v~~~-----~g~~~~a~~vI~AdG~~S~vr 170 (392)
T PRK09126 122 QQDGIELLTGTRVTAVRTDDDGAQVTLA-----NGRRLTARLLVAADSRFSATR 170 (392)
T ss_pred hCCCcEEEcCCeEEEEEEcCCeEEEEEc-----CCCEEEeCEEEEeCCCCchhh
Confidence 4579999999999999887777777764 456899999999999887653
No 169
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=98.70 E-value=5.3e-07 Score=91.04 Aligned_cols=58 Identities=19% Similarity=0.330 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+.+.|++++.+++++.++.+++.+.+++. ++.++.+|.||.|.|..+..
T Consensus 112 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~-----~g~~~~ad~vI~AdG~~S~v 169 (403)
T PRK07333 112 VLINALRKRAEALGIDLREATSVTDFETRDEGVTVTLS-----DGSVLEARLLVAADGARSKL 169 (403)
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEcCCEEEEEEC-----CCCEEEeCEEEEcCCCChHH
Confidence 56667777778889999999999999888888877764 45679999999999987654
No 170
>PRK13977 myosin-cross-reactive antigen; Provisional
Probab=98.69 E-value=2.6e-07 Score=94.02 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=58.7
Q ss_pred cHHHHHHHHHHHhcCCeeEEEcccCcc--C-CCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEc--CC-e-EE-EEEee
Q 010573 223 GYIGLEMGSVWARLGSEVTVVEFAADI--V-PSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS--GD-G-VK-LTLEP 294 (507)
Q Consensus 223 G~~g~e~A~~l~~~g~~Vtlv~~~~~~--~-~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~--~~-~-v~-v~~~~ 294 (507)
=.++.|+...+.++=..+.-+.....+ . ..-.+.+...+.+.++++||+|+++++|+++..+ ++ + ++ +.+..
T Consensus 191 whSA~E~rry~~rf~~~~~~l~~~s~l~ft~ynqyeSLV~PL~~~Le~~GV~f~~~t~VtdL~~~~d~~~~~VtgI~~~~ 270 (576)
T PRK13977 191 WHSALEMRRYMHRFIHHIGGLPDLSGLKFTKYNQYESLVLPLIKYLEDHGVDFQYGTKVTDIDFDITGGKKTATAIHLTR 270 (576)
T ss_pred hhHHHHHHHHHHHHHHhhccCCccccccCCCCCchhHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCCceEEEEEEEEe
Confidence 367888888887762222111111111 0 1122577888999999999999999999999874 22 2 22 44432
Q ss_pred -cCCCceEEEEcCEEEEeecCCCCCC
Q 010573 295 -AAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 295 -~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
...+.-...+.|.||+++|.-....
T Consensus 271 ~~~~~~I~l~~~DlVivTnGs~t~ns 296 (576)
T PRK13977 271 NGKEETIDLTEDDLVFVTNGSITESS 296 (576)
T ss_pred CCceeEEEecCCCEEEEeCCcCcccc
Confidence 1111123457999999999655443
No 171
>COG0579 Predicted dehydrogenase [General function prediction only]
Probab=98.69 E-value=2.8e-07 Score=90.87 Aligned_cols=57 Identities=32% Similarity=0.508 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
++...+.+.+.++|++++++++|+.++..++++. +.+. +|+.+ ++|+.||.|.|...
T Consensus 154 ~~t~~l~e~a~~~g~~i~ln~eV~~i~~~~dg~~~~~~~---~g~~~-~~ak~Vin~AGl~A 211 (429)
T COG0579 154 ELTRALAEEAQANGVELRLNTEVTGIEKQSDGVFVLNTS---NGEET-LEAKFVINAAGLYA 211 (429)
T ss_pred HHHHHHHHHHHHcCCEEEecCeeeEEEEeCCceEEEEec---CCcEE-EEeeEEEECCchhH
Confidence 4566677777888999999999999999888533 4433 23333 99999999999654
No 172
>PRK08013 oxidoreductase; Provisional
Probab=98.69 E-value=5.4e-07 Score=90.77 Aligned_cols=58 Identities=16% Similarity=0.277 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+.+. |++++.++++++++.+++.+.+++. +++++.+|+||-|.|.....
T Consensus 112 ~l~~~L~~~~~~~~~v~i~~~~~v~~i~~~~~~v~v~~~-----~g~~i~a~lvVgADG~~S~v 170 (400)
T PRK08013 112 VIHYALWQKAQQSSDITLLAPAELQQVAWGENEAFLTLK-----DGSMLTARLVVGADGANSWL 170 (400)
T ss_pred HHHHHHHHHHhcCCCcEEEcCCeeEEEEecCCeEEEEEc-----CCCEEEeeEEEEeCCCCcHH
Confidence 4555666666664 8999999999999888888888875 45689999999999987654
No 173
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=98.69 E-value=1.3e-06 Score=88.61 Aligned_cols=55 Identities=20% Similarity=0.317 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+...+.+.+++.|++++.+++|++++.+++.+. ++. ++.++.+|.||+|+|...
T Consensus 202 ~~~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~t------~~~~~~a~~VV~a~G~~~ 257 (416)
T PRK00711 202 LFTQRLAAMAEQLGVKFRFNTPVDGLLVEGGRITGVQT------GGGVITADAYVVALGSYS 257 (416)
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEecCCEEEEEEe------CCcEEeCCEEEECCCcch
Confidence 4566677788889999999999999987766654 433 234789999999999654
No 174
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=98.68 E-value=3e-07 Score=93.30 Aligned_cols=60 Identities=22% Similarity=0.396 Sum_probs=45.3
Q ss_pred HHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 257 IRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 257 ~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+.+.+.+.+.+ .|+++++++++++++.+++++.+++.+ ++...++.+|+||.|.|.....
T Consensus 123 l~~~L~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~--~~~~~~i~adlvIgADG~~S~v 183 (415)
T PRK07364 123 LLEALQEFLQSCPNITWLCPAEVVSVEYQQDAATVTLEI--EGKQQTLQSKLVVAADGARSPI 183 (415)
T ss_pred HHHHHHHHHhcCCCcEEEcCCeeEEEEecCCeeEEEEcc--CCcceEEeeeEEEEeCCCCchh
Confidence 44555565555 489999999999998888888887752 2233579999999999987754
No 175
>PRK08132 FAD-dependent oxidoreductase; Provisional
Probab=98.68 E-value=8e-07 Score=93.27 Aligned_cols=61 Identities=26% Similarity=0.345 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+.+. ++++++++++++++.+++++.+++.+. + ...++.+|.||.|.|.....
T Consensus 126 ~le~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~v~v~~~~~-~-g~~~i~ad~vVgADG~~S~v 187 (547)
T PRK08132 126 YVEGYLVERAQALPNIDLRWKNKVTGLEQHDDGVTLTVETP-D-GPYTLEADWVIACDGARSPL 187 (547)
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEcCCEEEEEEECC-C-CcEEEEeCEEEECCCCCcHH
Confidence 3445566666654 799999999999998888887776531 1 22479999999999988754
No 176
>PF13454 NAD_binding_9: FAD-NAD(P)-binding
Probab=98.68 E-value=2.3e-07 Score=79.99 Aligned_cols=131 Identities=18% Similarity=0.260 Sum_probs=67.7
Q ss_pred EEECCChHHHHHHHHHHHC-----CCcEEEEecCCCCC-ceeccccc-------cchhhhhhhhHHH-HHHHhhhhhCCc
Q 010573 47 VVIGGGPGGYVAAIKAAQL-----GLKTTCIEKRGALG-GTCLNVGC-------IPSKALLHSSHMY-HEAMHSFASHGV 112 (507)
Q Consensus 47 vIIG~G~aGl~aA~~l~~~-----g~~V~lie~~~~~G-G~~~~~~~-------~p~~~~~~~~~~~-~~~~~~~~~~g~ 112 (507)
+|||+|++|++++.+|.+. ..+|+|||+++. | |....... .|...+....... ..+.+++...+.
T Consensus 1 AIIG~G~~G~~~l~~L~~~~~~~~~~~I~vfd~~~~-G~G~~~~~~~~~~~llN~~a~~~s~~~~~~~~~f~~Wl~~~~~ 79 (156)
T PF13454_consen 1 AIIGGGPSGLAVLERLLRQADPKPPLEITVFDPSPF-GAGGAYRPDQPPSHLLNTPADQMSLFPDDPGDDFVDWLRANGA 79 (156)
T ss_pred CEECcCHHHHHHHHHHHHhcCCCCCCEEEEEcCCCc-cccccCCCCCChHHhhcccccccccccccCCCCHHHHHHhcCc
Confidence 5999999999999999987 468999999544 5 42221111 1222111111000 112222222221
Q ss_pred ----ccCccccChHHHHHHHHHHHHHHHHHHHHHHH--hCC--cEEEEeEEEEe--cCCEEEEEccCCceEEEEeCeEEE
Q 010573 113 ----KFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFK--KNK--VTYVKGYGKFI--SPSEVSVDTIEGGNTVVKGKNIII 182 (507)
Q Consensus 113 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--v~~~~~~~~~~--d~~~~~v~~~~g~~~~~~~d~lvl 182 (507)
......+.-+.+ +.+.+...+....+ ..+ |.++..++..+ ..+...+.+.+| ..+.+|+|||
T Consensus 80 ~~~~~~~~~~f~pR~~------~G~YL~~~~~~~~~~~~~~i~v~~~~~~V~~i~~~~~~~~v~~~~g--~~~~~d~VvL 151 (156)
T PF13454_consen 80 DEAEEIDPDDFPPRAL------FGEYLRDRFDRLLARLPAGITVRHVRAEVVDIRRDDDGYRVVTADG--QSIRADAVVL 151 (156)
T ss_pred ccccccccccCCCHHH------HHHHHHHHHHHHHHhhcCCcEEEEEeeEEEEEEEcCCcEEEEECCC--CEEEeCEEEE
Confidence 111111111111 11222222223222 234 45555666554 345567777888 7789999999
Q ss_pred ccCC
Q 010573 183 ATGS 186 (507)
Q Consensus 183 AtG~ 186 (507)
|||.
T Consensus 152 a~Gh 155 (156)
T PF13454_consen 152 ATGH 155 (156)
T ss_pred CCCC
Confidence 9995
No 177
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=98.67 E-value=6.1e-07 Score=92.86 Aligned_cols=62 Identities=19% Similarity=0.225 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+..++.|++++.+++|+++..+++.+.+++.+..+++..++.++.||.|+|...
T Consensus 155 ~rl~~~l~~~A~~~Ga~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~i~a~~VVnAaG~wa 216 (508)
T PRK12266 155 ARLVVLNARDAAERGAEILTRTRVVSARRENGLWHVTLEDTATGKRYTVRARALVNAAGPWV 216 (508)
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEEcCCCCEEEEEcCEEEECCCccH
Confidence 44555566667888999999999999987777676766543344456899999999999754
No 178
>PLN02697 lycopene epsilon cyclase
Probab=98.67 E-value=1.8e-07 Score=96.03 Aligned_cols=139 Identities=19% Similarity=0.202 Sum_probs=73.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCc-ccc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEV 119 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~ 119 (507)
...|||+||||||||+++|..|++.|++|+|||+...+...+..+ ...+.... .............+...+ ...
T Consensus 106 ~~~~DVvIVGaGPAGLalA~~Lak~Gl~V~LIe~~~p~~~n~GvW----~~~l~~lg-l~~~i~~~w~~~~v~~~~~~~~ 180 (529)
T PLN02697 106 DGTLDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVW----EDEFKDLG-LEDCIEHVWRDTIVYLDDDKPI 180 (529)
T ss_pred cCcccEEEECcCHHHHHHHHHHHhCCCcEEEecCcccCCCccccc----hhHHHhcC-cHHHHHhhcCCcEEEecCCcee
Confidence 346999999999999999999999999999999864443222111 11110000 000001100100000000 000
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEec--CCEEE-EEccCCceEEEEeCeEEEccCCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS--PSEVS-VDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d--~~~~~-v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
.... .+..-....+.+.+.+...+.+++++...+..+. .+... +...+| .++.++.||.|+|...
T Consensus 181 ~~~~--~Yg~V~R~~L~~~Ll~~a~~~GV~~~~~~V~~I~~~~~~~~vv~~~dG--~~i~A~lVI~AdG~~S 248 (529)
T PLN02697 181 MIGR--AYGRVSRTLLHEELLRRCVESGVSYLSSKVDRITEASDGLRLVACEDG--RVIPCRLATVASGAAS 248 (529)
T ss_pred eccC--cccEEcHHHHHHHHHHHHHhcCCEEEeeEEEEEEEcCCcEEEEEEcCC--cEEECCEEEECCCcCh
Confidence 0000 0000001223344444556678998766665553 23333 344555 6799999999999765
No 179
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Probab=98.67 E-value=2e-07 Score=98.43 Aligned_cols=147 Identities=24% Similarity=0.303 Sum_probs=84.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc-ccc-------chh--------h------------h
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV-GCI-------PSK--------A------------L 93 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~-~~~-------p~~--------~------------~ 93 (507)
.++||||||+|.||++||+.+++.|.+|+||||....+|.+... |.+ +.. . +
T Consensus 28 ~~~DVlVIG~G~AGl~AAi~Aa~~G~~V~lveK~~~~~g~t~~a~Ggi~a~~~~~~~Ds~e~~~~D~~~~g~~~~d~~lv 107 (617)
T PTZ00139 28 HTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDAI 107 (617)
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCcEEEEeccCCCCCCchhhcCCeeEEecCCCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 46899999999999999999999999999999977665543222 111 100 0 0
Q ss_pred hhhhHHHHHHHhhhhhCCcccCccc---cChHHHHHH----------------HHHHHHHHHHHHHHHHHhCCcEEEEeE
Q 010573 94 LHSSHMYHEAMHSFASHGVKFSSVE---VDLPAMMAQ----------------KDKAVSNLTRGIEGLFKKNKVTYVKGY 154 (507)
Q Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~v~~~~~~ 154 (507)
...........+++..+|+++.... +.......+ .+..-..+...+.+...+.+++++.+.
T Consensus 108 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~~~~~~~~r~~~~~d~tG~~i~~~L~~~a~~~gv~i~~~~ 187 (617)
T PTZ00139 108 QYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKYDCNFFIEY 187 (617)
T ss_pred HHHHHHHHHHHHHHHhcCCceEeCCCCcEeecccCcccccccCCCccceeeecCCCcHHHHHHHHHHHHHhCCCEEEece
Confidence 0111112234456677788763210 000000000 001123344445555666799998874
Q ss_pred -EEE-e--cCCEEE-E---EccCCceEEEEeCeEEEccCCCC
Q 010573 155 -GKF-I--SPSEVS-V---DTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 155 -~~~-~--d~~~~~-v---~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
+.. + +...+. + ...+|+...+.++.||||||+-.
T Consensus 188 ~~~~Li~~~~g~v~Gv~~~~~~~g~~~~i~AkaVVLATGG~~ 229 (617)
T PTZ00139 188 FALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYG 229 (617)
T ss_pred EEEEEEECCCCEEEEEEEEECCCCeEEEEECCcEEEeCCCCc
Confidence 333 2 222221 2 33466667889999999999754
No 180
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated
Probab=98.66 E-value=1.3e-06 Score=91.46 Aligned_cols=62 Identities=21% Similarity=0.388 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+.+ .|+++++++++++++.+++++.+++++. +|+.+++.+|.||.|.|.....
T Consensus 114 ~le~~L~~~~~~~~gv~v~~g~~v~~i~~~~~~v~v~~~~~-~G~~~~i~ad~vVgADG~~S~v 176 (538)
T PRK06183 114 LLEAVLRAGLARFPHVRVRFGHEVTALTQDDDGVTVTLTDA-DGQRETVRARYVVGCDGANSFV 176 (538)
T ss_pred HHHHHHHHHHHhCCCcEEEcCCEEEEEEEcCCeEEEEEEcC-CCCEEEEEEEEEEecCCCchhH
Confidence 455566666665 4999999999999998888888887532 3344689999999999976543
No 181
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=98.66 E-value=3.1e-08 Score=71.77 Aligned_cols=37 Identities=38% Similarity=0.581 Sum_probs=34.0
Q ss_pred EECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 48 VIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 48 IIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
|||||++|+++|+.|++.|++|+|+|+++.+||.+..
T Consensus 1 IiGaG~sGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~ 37 (68)
T PF13450_consen 1 IIGAGISGLAAAYYLAKAGYRVTVFEKNDRLGGRARS 37 (68)
T ss_dssp EES-SHHHHHHHHHHHHTTSEEEEEESSSSSSGGGCE
T ss_pred CEeeCHHHHHHHHHHHHCCCcEEEEecCcccCcceeE
Confidence 8999999999999999999999999999999998754
No 182
>PRK07121 hypothetical protein; Validated
Probab=98.66 E-value=7.7e-07 Score=92.09 Aligned_cols=45 Identities=42% Similarity=0.611 Sum_probs=39.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG 86 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~ 86 (507)
.++||||||+|.||++||+++++.|.+|+||||....||.....+
T Consensus 19 ~~~DVvVVGaG~AGl~AA~~aae~G~~VillEK~~~~gG~s~~sg 63 (492)
T PRK07121 19 DEADVVVVGFGAAGACAAIEAAAAGARVLVLERAAGAGGATALSG 63 (492)
T ss_pred CccCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCCcccccC
Confidence 468999999999999999999999999999999888887665443
No 183
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.65 E-value=2.6e-07 Score=97.36 Aligned_cols=40 Identities=40% Similarity=0.573 Sum_probs=35.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCce
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (507)
..+||||||+|.||++||+.+++.|.+|+||||....+|.
T Consensus 11 ~~~DVvVIG~G~AGl~AAl~Aa~~G~~V~lveK~~~~~g~ 50 (598)
T PRK09078 11 HKYDVVVVGAGGAGLRATLGMAEAGLKTACITKVFPTRSH 50 (598)
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCcEEEEEccCCCCcc
Confidence 4689999999999999999999999999999997655443
No 184
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.65 E-value=3.8e-06 Score=87.06 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+..+...+....++.|++++.+++|+++..+++.+.+++.+.. ++..++.++.||.|+|...
T Consensus 154 ~~rl~~~l~~~a~~~Ga~i~~~~~V~~i~~~~~~~~v~~~~~~-g~~~~i~a~~VVnAaG~wa 215 (502)
T PRK13369 154 DARLVVLNALDAAERGATILTRTRCVSARREGGLWRVETRDAD-GETRTVRARALVNAAGPWV 215 (502)
T ss_pred HHHHHHHHHHHHHHCCCEEecCcEEEEEEEcCCEEEEEEEeCC-CCEEEEEecEEEECCCccH
Confidence 3455566667778899999999999999887776667665433 4446799999999999654
No 185
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=98.65 E-value=8e-07 Score=89.03 Aligned_cols=56 Identities=20% Similarity=0.336 Sum_probs=44.2
Q ss_pred HHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 259 KQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 259 ~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
..+.+.+.+ .|++++.++++++++.+++++.+++. ++.++.+|+||.|.|..+..-
T Consensus 114 ~~L~~~~~~~~~i~i~~~~~v~~~~~~~~~~~v~~~-----~g~~~~~~lvIgADG~~S~vR 170 (384)
T PRK08849 114 LGLWQQFAQYPNLTLMCPEKLADLEFSAEGNRVTLE-----SGAEIEAKWVIGADGANSQVR 170 (384)
T ss_pred HHHHHHHHhCCCeEEECCCceeEEEEcCCeEEEEEC-----CCCEEEeeEEEEecCCCchhH
Confidence 344444433 47999999999999888888888875 456899999999999987653
No 186
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
Probab=98.64 E-value=4e-08 Score=85.51 Aligned_cols=45 Identities=38% Similarity=0.658 Sum_probs=38.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGC 87 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~ 87 (507)
..||+||||||+||+||++|++.|++|+|+|++-.+||-.+--|.
T Consensus 30 esDViIVGaGPsGLtAAyyLAk~g~kV~i~E~~ls~GGG~w~GGm 74 (262)
T COG1635 30 ESDVIIVGAGPSGLTAAYYLAKAGLKVAIFERKLSFGGGIWGGGM 74 (262)
T ss_pred hccEEEECcCcchHHHHHHHHhCCceEEEEEeecccCCccccccc
Confidence 469999999999999999999999999999998888765443333
No 187
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional
Probab=98.64 E-value=2.8e-06 Score=88.69 Aligned_cols=62 Identities=19% Similarity=0.180 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+....+++|++++.+++|+.+..+++++. +++.+..++++.++.+|.||.|+|...
T Consensus 149 ~rl~~al~~~A~~~Ga~i~~~t~V~~i~~~~~~v~gv~v~d~~~g~~~~i~A~~VVnAaG~wa 211 (546)
T PRK11101 149 FRLTAANMLDAKEHGAQILTYHEVTGLIREGDTVCGVRVRDHLTGETQEIHAPVVVNAAGIWG 211 (546)
T ss_pred HHHHHHHHHHHHhCCCEEEeccEEEEEEEcCCeEEEEEEEEcCCCcEEEEECCEEEECCChhH
Confidence 34555566677889999999999999987766654 555443344456899999999999654
No 188
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=98.64 E-value=4.2e-07 Score=91.02 Aligned_cols=59 Identities=20% Similarity=0.354 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhcC-cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~G-v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
++.+.+.+.+.+.+ |+++.+++|+.++.+++.+.+++.. +++++.+|+||-|-|.....
T Consensus 105 ~l~~~L~~~~~~~~~v~~~~~~~v~~~~~~~~~v~v~l~~----dG~~~~a~llVgADG~~S~v 164 (387)
T COG0654 105 DLLNALLEAARALPNVTLRFGAEVEAVEQDGDGVTVTLSF----DGETLDADLLVGADGANSAV 164 (387)
T ss_pred HHHHHHHHHHhhCCCcEEEcCceEEEEEEcCCceEEEEcC----CCcEEecCEEEECCCCchHH
Confidence 56777788887665 9999999999999988888887752 34599999999999977643
No 189
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.
Probab=98.63 E-value=1.7e-06 Score=88.77 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
..+...+.+.+++.|++++.++.|++++. ++.+.+++. ++ ++.+|.||+|+|..
T Consensus 183 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~~v~t~-----~g-~v~A~~VV~Atga~ 236 (460)
T TIGR03329 183 GLLVRGLRRVALELGVEIHENTPMTGLEE-GQPAVVRTP-----DG-QVTADKVVLALNAW 236 (460)
T ss_pred HHHHHHHHHHHHHcCCEEECCCeEEEEee-CCceEEEeC-----Cc-EEECCEEEEccccc
Confidence 35567777888899999999999999975 344445432 33 68999999999854
No 190
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=98.63 E-value=1.2e-06 Score=88.34 Aligned_cols=56 Identities=14% Similarity=0.315 Sum_probs=43.4
Q ss_pred HHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 258 RKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 258 ~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
...+.+.+.+ .|++++.++++++++.+++.+.+++. +++++.+|+||.|.|.....
T Consensus 114 ~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~v~~~-----~g~~~~a~lvIgADG~~S~v 170 (405)
T PRK08850 114 QLALLEQVQKQDNVTLLMPARCQSIAVGESEAWLTLD-----NGQALTAKLVVGADGANSWL 170 (405)
T ss_pred HHHHHHHHhcCCCeEEEcCCeeEEEEeeCCeEEEEEC-----CCCEEEeCEEEEeCCCCChh
Confidence 3344455544 48999999999999887888888875 45689999999999987654
No 191
>PRK06126 hypothetical protein; Provisional
Probab=98.62 E-value=1.5e-06 Score=91.23 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=47.3
Q ss_pred HHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 257 IRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 257 ~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+...+.+.+++ .|+++++++.+++++.+++++.+++.+..+++..++.+|.||.|.|....
T Consensus 128 l~~~L~~~~~~~~~v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~ad~vVgADG~~S~ 189 (545)
T PRK06126 128 LEPILLEHAAAQPGVTLRYGHRLTDFEQDADGVTATVEDLDGGESLTIRADYLVGCDGARSA 189 (545)
T ss_pred HHHHHHHHHHhCCCceEEeccEEEEEEECCCeEEEEEEECCCCcEEEEEEEEEEecCCcchH
Confidence 44555666554 58999999999999988888888876545555568999999999997653
No 192
>PRK07190 hypothetical protein; Provisional
Probab=98.61 E-value=7.5e-07 Score=91.55 Aligned_cols=139 Identities=18% Similarity=0.226 Sum_probs=75.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC--ceeccccccc-hhhhhhhhHHHHHHHhh---hhh------C
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG--GTCLNVGCIP-SKALLHSSHMYHEAMHS---FAS------H 110 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G--G~~~~~~~~p-~~~~~~~~~~~~~~~~~---~~~------~ 110 (507)
.+||+||||||+|+++|..|++.|.+|+||||.+... |.+. +..| +..++.....+..+... ... .
T Consensus 5 ~~dVlIVGAGPaGL~lA~~Lar~Gi~V~llEr~~~~~~~gra~--~l~~~tle~L~~lGl~~~l~~~~~~~~~~~~~~~g 82 (487)
T PRK07190 5 VTDVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRAD--ALNARTLQLLELVDLFDELYPLGKPCNTSSVWANG 82 (487)
T ss_pred cceEEEECCCHHHHHHHHHHHHcCCCEEEEeCCCcccccccce--EeCHHHHHHHHhcChHHHHHhhCccceeEEEecCC
Confidence 4899999999999999999999999999999976542 2221 0111 11111111111111110 000 0
Q ss_pred C-cc-----cCccc-cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEE--ecCCEEEEEccCCceEEEEeCeE
Q 010573 111 G-VK-----FSSVE-VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKF--ISPSEVSVDTIEGGNTVVKGKNI 180 (507)
Q Consensus 111 g-~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~--~d~~~~~v~~~~g~~~~~~~d~l 180 (507)
. +. +.... .......... ...+...+.+.+.+.++++..+. +.. .+.+.+.+.+.+| .++.+++|
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~~~---q~~le~~L~~~~~~~Gv~v~~~~~v~~l~~~~~~v~v~~~~g--~~v~a~~v 157 (487)
T PRK07190 83 KFISRQSSWWEELEGCLHKHFLMLG---QSYVEKLLDDKLKEAGAAVKRNTSVVNIELNQAGCLTTLSNG--ERIQSRYV 157 (487)
T ss_pred ceEeeccccCccCCcCCCCceEecC---HHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCeeEEEECCC--cEEEeCEE
Confidence 0 00 00000 0000000000 01223334455566799998874 433 3455666666666 58999999
Q ss_pred EEccCCCC
Q 010573 181 IIATGSDV 188 (507)
Q Consensus 181 vlAtG~~p 188 (507)
|.|+|.+.
T Consensus 158 VgADG~~S 165 (487)
T PRK07190 158 IGADGSRS 165 (487)
T ss_pred EECCCCCH
Confidence 99999865
No 193
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare [].; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0016117 carotenoid biosynthetic process
Probab=98.61 E-value=9.3e-08 Score=95.12 Aligned_cols=136 Identities=18% Similarity=0.196 Sum_probs=75.0
Q ss_pred cEEEECCChHHHHHHHHH--HHCCCcEEEEecCCCC--CceeccccccchhhhhhhhHHHHHHH-hhhhhCCcccCcccc
Q 010573 45 DVVVIGGGPGGYVAAIKA--AQLGLKTTCIEKRGAL--GGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEV 119 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l--~~~g~~V~lie~~~~~--GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 119 (507)
||+||||||||+++|.+| ++.|.+|+|||++... ...+. + |.-...+.. +.... .......+.......
T Consensus 1 DviIvGaGpAGlslA~~l~~~~~g~~Vllid~~~~~~~~~~~t-W-~~~~~~~~~----~~~~v~~~w~~~~v~~~~~~~ 74 (374)
T PF05834_consen 1 DVIIVGAGPAGLSLARRLADARPGLSVLLIDPKPKPPWPNDRT-W-CFWEKDLGP----LDSLVSHRWSGWRVYFPDGSR 74 (374)
T ss_pred CEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCccccccCCcc-c-ccccccccc----hHHHHheecCceEEEeCCCce
Confidence 899999999999999999 7779999999997766 44331 1 111110000 11111 111111111111000
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCC--EEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~--~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
.... ..+..-....+...+.+.++..++.++...+..++.. ...+.+.+| .++.++.||-|+|..+.
T Consensus 75 ~~~~-~~Y~~i~~~~f~~~l~~~~~~~~~~~~~~~V~~i~~~~~~~~v~~~~g--~~i~a~~VvDa~g~~~~ 143 (374)
T PF05834_consen 75 ILID-YPYCMIDRADFYEFLLERAAAGGVIRLNARVTSIEETGDGVLVVLADG--RTIRARVVVDARGPSSP 143 (374)
T ss_pred EEcc-cceEEEEHHHHHHHHHHHhhhCCeEEEccEEEEEEecCceEEEEECCC--CEEEeeEEEECCCcccc
Confidence 0000 0000000123334444555556777777777666433 457778888 68999999999996543
No 194
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K.
Probab=98.60 E-value=2.2e-08 Score=87.71 Aligned_cols=45 Identities=40% Similarity=0.597 Sum_probs=34.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG 86 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~ 86 (507)
.++||+||||||+|++||+.|++.|++|+++|++..+||....-+
T Consensus 16 ~~~DV~IVGaGpaGl~aA~~La~~g~kV~v~E~~~~~GGg~~~Gg 60 (230)
T PF01946_consen 16 LEYDVAIVGAGPAGLTAAYYLAKAGLKVAVIERKLSPGGGMWGGG 60 (230)
T ss_dssp TEESEEEE--SHHHHHHHHHHHHHTS-EEEEESSSS-BTTTTS-C
T ss_pred ccCCEEEECCChhHHHHHHHHHHCCCeEEEEecCCCCCccccccc
Confidence 358999999999999999999999999999999888886543333
No 195
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=98.60 E-value=2.8e-07 Score=92.54 Aligned_cols=37 Identities=35% Similarity=0.627 Sum_probs=33.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
..+||+|||||++|+++|..|++.|.+|+|||+.+..
T Consensus 6 ~~~dViIVGaG~~Gl~~A~~L~~~G~~v~liE~~~~~ 42 (388)
T PRK07494 6 EHTDIAVIGGGPAGLAAAIALARAGASVALVAPEPPY 42 (388)
T ss_pred CCCCEEEECcCHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 3589999999999999999999999999999997644
No 196
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional
Probab=98.60 E-value=1.3e-06 Score=87.72 Aligned_cols=57 Identities=23% Similarity=0.437 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhcC-cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~G-v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+++.| ++++ +.++++++.+++++.+++. ++.++.+|.||.|.|.....
T Consensus 112 ~l~~~L~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~-----~g~~~~a~~vI~adG~~S~v 169 (388)
T PRK07608 112 LIERALWAALRFQPNLTWF-PARAQGLEVDPDAATLTLA-----DGQVLRADLVVGADGAHSWV 169 (388)
T ss_pred HHHHHHHHHHHhCCCcEEE-cceeEEEEecCCeEEEEEC-----CCCEEEeeEEEEeCCCCchH
Confidence 45566767777777 9998 9999999877778777764 34579999999999987643
No 197
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=98.60 E-value=1.2e-06 Score=88.13 Aligned_cols=57 Identities=18% Similarity=0.306 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 257 IRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 257 ~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+.+.+.+.+++. |++++.++.+++++.+++++.+++. +++++.+|.||.|.|.....
T Consensus 114 l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~-----~g~~~~a~~vI~AdG~~S~v 171 (391)
T PRK08020 114 LQLALWQALEAHPNVTLRCPASLQALQRDDDGWELTLA-----DGEEIQAKLVIGADGANSQV 171 (391)
T ss_pred HHHHHHHHHHcCCCcEEEcCCeeEEEEEcCCeEEEEEC-----CCCEEEeCEEEEeCCCCchh
Confidence 445556666665 9999999999999877777777764 34589999999999988754
No 198
>PRK07588 hypothetical protein; Provisional
Probab=98.60 E-value=1.1e-06 Score=88.40 Aligned_cols=57 Identities=18% Similarity=0.341 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+.+.+.+.+. .|+++++++++++++.+++++.++++ +++++.+|+||.|.|.....-
T Consensus 105 l~~~L~~~~~-~~v~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~~d~vIgADG~~S~vR 161 (391)
T PRK07588 105 LAAAIYTAID-GQVETIFDDSIATIDEHRDGVRVTFE-----RGTPRDFDLVIGADGLHSHVR 161 (391)
T ss_pred HHHHHHHhhh-cCeEEEeCCEEeEEEECCCeEEEEEC-----CCCEEEeCEEEECCCCCccch
Confidence 3334444443 47999999999999988888888775 456789999999999877654
No 199
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.60 E-value=5.6e-07 Score=94.57 Aligned_cols=147 Identities=22% Similarity=0.235 Sum_probs=83.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc-ccc-------chh--------------------hh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV-GCI-------PSK--------------------AL 93 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~-~~~-------p~~--------------------~~ 93 (507)
.++||||||+|.||++||+++++.|.+|+|+||....+|.+... |.+ +.. .+
T Consensus 6 ~~~DVlVVG~G~AGl~AAi~Aa~~G~~V~lleK~~~~~g~t~~a~Ggi~a~~~~~~~Ds~e~~~~D~~~~g~~~~d~~~v 85 (588)
T PRK08958 6 REFDAVVIGAGGAGMRAALQISQSGQSCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCcEEEEEccCCCCCccHHhhhhHhhhcCCCCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 35899999999999999999999999999999976655433221 111 100 00
Q ss_pred hhhhHHHHHHHhhhhhCCcccCccc---cChHHHHHH---------------HHHHHHHHHHHHHHHHHhCCcEEEEeE-
Q 010573 94 LHSSHMYHEAMHSFASHGVKFSSVE---VDLPAMMAQ---------------KDKAVSNLTRGIEGLFKKNKVTYVKGY- 154 (507)
Q Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~v~~~~~~- 154 (507)
...........+++..+|+++.... +.......+ .+..-..+...+.+...+.+++++.+.
T Consensus 86 ~~~~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~G~~i~~~L~~~~~~~gi~i~~~~~ 165 (588)
T PRK08958 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165 (588)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceeecccccccccccccccceeEecCCCCHHHHHHHHHHHhhhcCCEEEeCcE
Confidence 1111112244456677788764210 000000000 001122334444444556789888774
Q ss_pred EEE-e-c-CCEEE-E---EccCCceEEEEeCeEEEccCCCC
Q 010573 155 GKF-I-S-PSEVS-V---DTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 155 ~~~-~-d-~~~~~-v---~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
+.. + + ...+. + ...+|+...+.++.||||||.-.
T Consensus 166 ~~~Li~~~~g~v~Gv~~~~~~~g~~~~i~AkaVILATGG~~ 206 (588)
T PRK08958 166 ALDLVKNQDGAVVGCTAICIETGEVVYFKARATVLATGGAG 206 (588)
T ss_pred EEEEEECCCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 333 2 3 22221 1 23466567889999999999754
No 200
>TIGR01813 flavo_cyto_c flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton.
Probab=98.59 E-value=2.8e-07 Score=94.04 Aligned_cols=40 Identities=38% Similarity=0.564 Sum_probs=36.2
Q ss_pred cEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCCceecc
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~GG~~~~ 84 (507)
||||||+|.||++||++|++.| .+|+||||.+..||....
T Consensus 1 DVvVVG~G~AGl~AA~~aa~~G~~~V~vlEk~~~~gg~s~~ 41 (439)
T TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGAANVVLLEKMPVIGGNSAI 41 (439)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCccEEEEecCCCCCCcccc
Confidence 7999999999999999999999 999999998887766543
No 201
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=98.59 E-value=1.2e-06 Score=91.69 Aligned_cols=45 Identities=42% Similarity=0.695 Sum_probs=40.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG 86 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~ 86 (507)
.++||+|||+|.+|++||..+++.|.+|+||||....||++...+
T Consensus 5 ~~~DvvIiG~G~aGl~aA~~~a~~G~~v~liEk~~~~gG~~~~s~ 49 (557)
T PRK12844 5 ETYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQDKVGGSTAMSG 49 (557)
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCceeceec
Confidence 368999999999999999999999999999999888899876554
No 202
>PRK12839 hypothetical protein; Provisional
Probab=98.58 E-value=3.6e-06 Score=88.08 Aligned_cols=54 Identities=39% Similarity=0.572 Sum_probs=46.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc---ccchhhh
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG---CIPSKAL 93 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~---~~p~~~~ 93 (507)
+..++||+|||+|.+|++||+.|++.|.+|+||||....||++.+.+ |+|...+
T Consensus 5 ~~~~~dv~ViG~G~aG~~aa~~~~~~g~~v~~iek~~~~gg~~~~~~g~~~~~~~~~ 61 (572)
T PRK12839 5 MTHTYDVVVVGSGAGGLSAAVAAAYGGAKVLVVEKASTCGGATAWSGGWMWTPGNSL 61 (572)
T ss_pred cCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCccccccCCeeecCCchh
Confidence 44578999999999999999999999999999999889999988766 5665543
No 203
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=98.57 E-value=1.8e-06 Score=86.70 Aligned_cols=58 Identities=19% Similarity=0.314 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcC-cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~G-v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+.+.+.+.| ++++.+++|++++.+++++.++++ +++++.+|.||.|.|.....
T Consensus 107 ~l~~~L~~~~~~~~~~~v~~~~~v~~i~~~~~~~~v~~~-----~g~~~~~~~vi~adG~~S~v 165 (385)
T TIGR01988 107 VLQQALWERLQEYPNVTLLCPARVVELPRHSDHVELTLD-----DGQQLRARLLVGADGANSKV 165 (385)
T ss_pred HHHHHHHHHHHhCCCcEEecCCeEEEEEecCCeeEEEEC-----CCCEEEeeEEEEeCCCCCHH
Confidence 45566777777777 999999999999887888777764 45579999999999987543
No 204
>PRK12834 putative FAD-binding dehydrogenase; Reviewed
Probab=98.57 E-value=5.5e-07 Score=94.25 Aligned_cols=43 Identities=33% Similarity=0.604 Sum_probs=38.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC--CCCceec
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG--ALGGTCL 83 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~--~~GG~~~ 83 (507)
..++||||||+|.||++||..+++.|.+|+||||.+ ..||...
T Consensus 2 ~~~~DVvVVG~G~AGl~AAl~Aa~~G~~VivlEK~~~~~~GG~s~ 46 (549)
T PRK12834 2 AMDADVIVVGAGLAGLVAAAELADAGKRVLLLDQENEANLGGQAF 46 (549)
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCcee
Confidence 356899999999999999999999999999999988 6777653
No 205
>PRK11445 putative oxidoreductase; Provisional
Probab=98.57 E-value=7.6e-07 Score=87.95 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
+|||+||||||||+++|..|++. ++|+|+|+.+..
T Consensus 1 ~~dV~IvGaGpaGl~~A~~La~~-~~V~liE~~~~~ 35 (351)
T PRK11445 1 HYDVAIIGLGPAGSALARLLAGK-MKVIAIDKKHQC 35 (351)
T ss_pred CceEEEECCCHHHHHHHHHHhcc-CCEEEEECCCcc
Confidence 48999999999999999999999 999999997643
No 206
>PRK05257 malate:quinone oxidoreductase; Validated
Probab=98.56 E-value=3.7e-06 Score=86.21 Aligned_cols=62 Identities=27% Similarity=0.436 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhcC-cEEEcCceEEEEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~G-v~i~~~~~v~~i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+.+.+.+.+++.| ++++++++|+.++.++++ +.+++.+..+++..++.++.||+|.|...
T Consensus 183 ~~l~~aL~~~a~~~Ggv~i~~~teV~~I~~~~dg~~~v~~~~~~~G~~~~i~A~~VVvaAGg~s 246 (494)
T PRK05257 183 GALTRQLVGYLQKQGNFELQLGHEVRDIKRNDDGSWTVTVKDLKTGEKRTVRAKFVFIGAGGGA 246 (494)
T ss_pred HHHHHHHHHHHHhCCCeEEEeCCEEEEEEECCCCCEEEEEEEcCCCceEEEEcCEEEECCCcch
Confidence 356677777788776 899999999999875554 66655432233334699999999999764
No 207
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=98.56 E-value=1.5e-06 Score=86.63 Aligned_cols=57 Identities=9% Similarity=0.230 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
++.+.+.+.+.+. +++++.+++++++..+++++.+++. ++ ++.+|+||.|.|.....
T Consensus 105 ~L~~~L~~~~~~~~~v~~~~~~~v~~i~~~~~~v~v~~~-----~~-~~~adlvIgADG~~S~v 162 (374)
T PRK06617 105 DFKKILLSKITNNPLITLIDNNQYQEVISHNDYSIIKFD-----DK-QIKCNLLIICDGANSKV 162 (374)
T ss_pred HHHHHHHHHHhcCCCcEEECCCeEEEEEEcCCeEEEEEc-----CC-EEeeCEEEEeCCCCchh
Confidence 5566677766665 4999999999999888888888774 33 89999999999988765
No 208
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase. This membrane-associated enzyme is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase.
Probab=98.55 E-value=6.7e-06 Score=84.28 Aligned_cols=62 Identities=21% Similarity=0.282 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcC-CeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++++++|++++.++ +.+.+++.+..++++.++.+|.||+|+|...
T Consensus 178 ~~l~~aL~~~a~~~Gv~i~~~t~V~~i~~~~~~~v~v~~~~~~~g~~~~i~A~~VV~AAG~~s 240 (483)
T TIGR01320 178 GALTKQLLGYLVQNGTTIRFGHEVRNLKRQSDGSWTVTVKNTRTGGKRTLNTRFVFVGAGGGA 240 (483)
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCeEEEEEeeccCCceEEEECCEEEECCCcch
Confidence 4567778888888999999999999998754 3566655433333445799999999999654
No 209
>PRK07538 hypothetical protein; Provisional
Probab=98.54 E-value=2.5e-06 Score=86.42 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=45.1
Q ss_pred HHHHHHHHHHh-cC-cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 257 IRKQFQRSLEK-QK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 257 ~~~~~~~~l~~-~G-v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+.+.+.+.+.+ .| ..+++++++++++.+++++.+.+.+..+++++++.+|+||-|.|.....
T Consensus 104 l~~~L~~~~~~~~g~~~i~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~adlvIgADG~~S~v 167 (413)
T PRK07538 104 LQMLLLDAVRERLGPDAVRTGHRVVGFEQDADVTVVFLGDRAGGDLVSVRGDVLIGADGIHSAV 167 (413)
T ss_pred HHHHHHHHHHhhcCCcEEEcCCEEEEEEecCCceEEEEeccCCCccceEEeeEEEECCCCCHHH
Confidence 44455555544 35 5799999999998777776777665444556789999999999987654
No 210
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.54 E-value=1e-06 Score=92.69 Aligned_cols=62 Identities=18% Similarity=0.193 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+...+.|++++.++.++++..+ ++.+. +.+.+..++....+.++.||+|+|-..
T Consensus 148 ~~l~~~L~~~~~~~gi~i~~~~~~~~Li~~~~g~v~Gv~~~~~~~g~~~~i~AkaVILATGG~~ 211 (591)
T PRK07057 148 HALLHTLYQQNVAAKTQFFVEWMALDLIRDADGDVLGVTALEMETGDVYILEAKTTLFATGGAG 211 (591)
T ss_pred HHHHHHHHHHHHhcCCEEEeCcEEEEEEEcCCCeEEEEEEEEcCCCeEEEEECCeEEECCCCcc
Confidence 456666777777889999999999998764 34443 444333334445788999999999643
No 211
>PTZ00383 malate:quinone oxidoreductase; Provisional
Probab=98.53 E-value=6.6e-06 Score=84.14 Aligned_cols=55 Identities=20% Similarity=0.282 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHh----cC--cEEEcCceEEEEEEc-CCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEK----QK--MKFMLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~----~G--v~i~~~~~v~~i~~~-~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+...+.+.+++ .| ++++++++|+.++.. ++.+.+++. ++ ++.+|.||+|+|...
T Consensus 212 ~L~~al~~~a~~~~~~~G~~v~i~~~t~V~~I~~~~~~~~~V~T~-----~G-~i~A~~VVvaAG~~S 273 (497)
T PTZ00383 212 KLSESFVKHARRDALVPGKKISINLNTEVLNIERSNDSLYKIHTN-----RG-EIRARFVVVSACGYS 273 (497)
T ss_pred HHHHHHHHHHHhhhhhcCCCEEEEeCCEEEEEEecCCCeEEEEEC-----CC-EEEeCEEEECcChhH
Confidence 566777777777 67 889999999999876 444556543 33 699999999999654
No 212
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Probab=98.52 E-value=2.6e-06 Score=87.57 Aligned_cols=98 Identities=23% Similarity=0.330 Sum_probs=69.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||++|+.+|..|++.|.+|+|+++.+.+.. . .+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~---------~----------------------------~~-- 210 (461)
T TIGR01350 170 PESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRILP---------G----------------------------ED-- 210 (461)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCCCCC---------C----------------------------CC--
Confidence 36899999999999999999999999999999653311 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+++++.+. +..++ .+.+.+.+.+|+...+.+|.||+|+|..|.
T Consensus 211 ----------~~~~~~~~~~l~~~gi~i~~~~~v~~i~~~~~~v~v~~~~g~~~~i~~D~vi~a~G~~p~ 270 (461)
T TIGR01350 211 ----------AEVSKVVAKALKKKGVKILTNTKVTAVEKNDDQVVYENKGGETETLTGEKVLVAVGRKPN 270 (461)
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEeCCEEEEEEeCCcEEEEEeCEEEEecCCccc
Confidence 0011122345667789998874 44443 445566655554467999999999999985
No 213
>PRK08244 hypothetical protein; Provisional
Probab=98.51 E-value=6.2e-07 Score=92.95 Aligned_cols=36 Identities=39% Similarity=0.618 Sum_probs=33.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
++||+||||||+|+++|..|++.|++|+||||.+..
T Consensus 2 ~~dVlIVGaGpaGl~lA~~L~~~G~~v~viEr~~~~ 37 (493)
T PRK08244 2 KYEVIIIGGGPVGLMLASELALAGVKTCVIERLKET 37 (493)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 379999999999999999999999999999997643
No 214
>PRK13339 malate:quinone oxidoreductase; Reviewed
Probab=98.49 E-value=4.5e-06 Score=85.04 Aligned_cols=62 Identities=23% Similarity=0.369 Sum_probs=43.8
Q ss_pred HHHHHHHHHHH-hcCcEEEcCceEEEEEEc-CCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 256 EIRKQFQRSLE-KQKMKFMLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 256 ~~~~~~~~~l~-~~Gv~i~~~~~v~~i~~~-~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+.+.+.+.+. ..|+++++++.|+.++.. ++++.+.+....+++..++.+|.||+|.|....
T Consensus 185 ~L~~aL~~~l~~~~Gv~i~~~~~V~~I~~~~d~~w~v~v~~t~~g~~~~i~Ad~VV~AAGawS~ 248 (497)
T PRK13339 185 ALTRKLAKHLESHPNAQVKYNHEVVDLERLSDGGWEVTVKDRNTGEKREQVADYVFIGAGGGAI 248 (497)
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEECCCCCEEEEEEecCCCceEEEEcCEEEECCCcchH
Confidence 45566666665 459999999999999876 666666543222222236899999999997763
No 215
>COG1231 Monoamine oxidase [Amino acid transport and metabolism]
Probab=98.47 E-value=8.6e-07 Score=86.21 Aligned_cols=44 Identities=30% Similarity=0.576 Sum_probs=40.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
.+..||+|||+|.+||+||..|.+.|++|+|+|.++++||.|..
T Consensus 5 ~~~~~viivGaGlaGL~AA~eL~kaG~~v~ilEar~r~GGR~~t 48 (450)
T COG1231 5 PKTADVIIVGAGLAGLSAAYELKKAGYQVQILEARDRVGGRSLT 48 (450)
T ss_pred CCCCcEEEECCchHHHHHHHHHhhcCcEEEEEeccCCcCceeEE
Confidence 45679999999999999999999999999999999999998864
No 216
>PTZ00306 NADH-dependent fumarate reductase; Provisional
Probab=98.45 E-value=2e-06 Score=97.34 Aligned_cols=43 Identities=42% Similarity=0.607 Sum_probs=39.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
+..+||||||+|.||++||+.+++.|.+|+|+||.+..||+..
T Consensus 407 t~~~DVvVVG~G~AGl~AAi~Aae~Ga~VivlEK~~~~GG~s~ 449 (1167)
T PTZ00306 407 SLPARVIVVGGGLAGCSAAIEAASCGAQVILLEKEAKLGGNSA 449 (1167)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEEccCCCCCchh
Confidence 3468999999999999999999999999999999888888654
No 217
>PRK06475 salicylate hydroxylase; Provisional
Probab=98.45 E-value=4.8e-06 Score=83.89 Aligned_cols=61 Identities=8% Similarity=0.193 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
++.+.+.+.+.+ .+++++++++++.++.+++++.+++.+.. +++++.+|+||-|.|.....
T Consensus 108 ~l~~~L~~~~~~~~~i~v~~~~~v~~~~~~~~~v~v~~~~~~--~~~~~~adlvIgADG~~S~v 169 (400)
T PRK06475 108 DLQSALLDACRNNPGIEIKLGAEMTSQRQTGNSITATIIRTN--SVETVSAAYLIACDGVWSML 169 (400)
T ss_pred HHHHHHHHHHHhcCCcEEEECCEEEEEecCCCceEEEEEeCC--CCcEEecCEEEECCCccHhH
Confidence 455666666654 48999999999999887788888775322 34579999999999987654
No 218
>PTZ00363 rab-GDP dissociation inhibitor; Provisional
Probab=98.44 E-value=9.5e-07 Score=88.90 Aligned_cols=45 Identities=20% Similarity=0.269 Sum_probs=41.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
|.+.|||+|||+|.+|+.+|..|++.|++|+++|+++..||.+..
T Consensus 1 m~~~~DViViGtGL~e~ilAa~Ls~~GkkVLhlD~n~~yGG~~as 45 (443)
T PTZ00363 1 MDETYDVIVCGTGLKECILSGLLSVNGKKVLHMDRNPYYGGESAS 45 (443)
T ss_pred CCCcceEEEECCChHHHHHHhhhhhCCCEEEEecCCCCcCccccc
Confidence 456799999999999999999999999999999999999997653
No 219
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=98.44 E-value=9.6e-07 Score=79.98 Aligned_cols=97 Identities=29% Similarity=0.393 Sum_probs=67.8
Q ss_pred EEEcCcHHHHHHHHHHHhcCCe-eEEEcccCccCC--------------C-C-------C--------------------
Q 010573 218 VVIGAGYIGLEMGSVWARLGSE-VTVVEFAADIVP--------------S-M-------D-------------------- 254 (507)
Q Consensus 218 vVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~~~--------------~-~-------d-------------------- 254 (507)
+|||+|+.|+-+|..|.+.|.+ ++++++.+.+.. . + +
T Consensus 1 ~IIGaG~aGl~~a~~l~~~g~~~v~v~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (203)
T PF13738_consen 1 VIIGAGPAGLAAAAHLLERGIDPVVVLERNDRPGGVWRRYYSYTRLHSPSFFSSDFGLPDFESFSFDDSPEWRWPHDFPS 80 (203)
T ss_dssp EEE--SHHHHHHHHHHHHTT---EEEEESSSSSTTHHHCH-TTTT-BSSSCCTGGSS--CCCHSCHHHHHHHHHSBSSEB
T ss_pred CEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCeeEEeCCCCccccCccccccccCCcccccccccCCCCCCCcccCC
Confidence 6999999999999999999999 999998755420 0 0 0
Q ss_pred -HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecC--CCCCC
Q 010573 255 -GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGR--TPFTA 319 (507)
Q Consensus 255 -~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~~ 319 (507)
+++.+.+++..++.+++++++++|++++.++++..+++. +++++.+|.||+|+|. .|...
T Consensus 81 ~~~v~~yl~~~~~~~~l~i~~~~~V~~v~~~~~~w~v~~~-----~~~~~~a~~VVlAtG~~~~p~~p 143 (203)
T PF13738_consen 81 GEEVLDYLQEYAERFGLEIRFNTRVESVRRDGDGWTVTTR-----DGRTIRADRVVLATGHYSHPRIP 143 (203)
T ss_dssp HHHHHHHHHHHHHHTTGGEETS--EEEEEEETTTEEEEET-----TS-EEEEEEEEE---SSCSB---
T ss_pred HHHHHHHHHHHHhhcCcccccCCEEEEEEEeccEEEEEEE-----ecceeeeeeEEEeeeccCCCCcc
Confidence 245567778888889999999999999999888888875 4468999999999996 55544
No 220
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=98.44 E-value=6.7e-06 Score=83.68 Aligned_cols=106 Identities=25% Similarity=0.277 Sum_probs=80.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC------------------------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------------------ 251 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 251 (507)
.++|+|||+|++|+-+|..+.+.|.+|+++++++.+..
T Consensus 10 ~~~VaIIGAG~aGL~aA~~l~~~G~~v~vfE~~~~vGG~W~~~~~~~~d~~~~~~~~~~~~s~~Y~~L~tn~p~~~m~f~ 89 (461)
T PLN02172 10 SQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDPLSLDPTRSIVHSSVYESLRTNLPRECMGYR 89 (461)
T ss_pred CCCEEEECCcHHHHHHHHHHHhcCCeEEEEecCCCCcceeecCCCcCCCccccCCCCcccchhhhhhhhccCCHhhccCC
Confidence 58899999999999999999999999999998654310
Q ss_pred ---CC---------------CHHHHHHHHHHHHhcCcE--EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEe
Q 010573 252 ---SM---------------DGEIRKQFQRSLEKQKMK--FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVS 311 (507)
Q Consensus 252 ---~~---------------d~~~~~~~~~~l~~~Gv~--i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a 311 (507)
.. ..++.+.+++..+..|+. ++++++|++++..++++.|++.+. ++...+..+|.||+|
T Consensus 90 dfp~~~~~~~~~~~~~~fp~~~ev~~YL~~~a~~fgl~~~I~~~t~V~~V~~~~~~w~V~~~~~-~~~~~~~~~d~VIvA 168 (461)
T PLN02172 90 DFPFVPRFDDESRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQSKNS-GGFSKDEIFDAVVVC 168 (461)
T ss_pred CCCCCcccccccCcCCCCCCHHHHHHHHHHHHHHcCCcceEEecCEEEEEeecCCeEEEEEEcC-CCceEEEEcCEEEEe
Confidence 00 035666677777778888 889999999988777777776532 112235789999999
Q ss_pred ec--CCCCCCC
Q 010573 312 AG--RTPFTAG 320 (507)
Q Consensus 312 ~G--~~p~~~~ 320 (507)
+| ..|+...
T Consensus 169 tG~~~~P~~P~ 179 (461)
T PLN02172 169 NGHYTEPNVAH 179 (461)
T ss_pred ccCCCCCcCCC
Confidence 99 5666543
No 221
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=98.43 E-value=3.4e-06 Score=86.84 Aligned_cols=99 Identities=23% Similarity=0.377 Sum_probs=68.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||++|+.+|..|++.|.+|+|+++.+.+. |. .+
T Consensus 180 ~~~vvIIGgG~~G~E~A~~l~~~g~~Vtli~~~~~il---------~~----------------------------~~-- 220 (472)
T PRK05976 180 PKSLVIVGGGVIGLEWASMLADFGVEVTVVEAADRIL---------PT----------------------------ED-- 220 (472)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccC---------Cc----------------------------CC--
Confidence 3689999999999999999999999999999854321 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec---CCEE-EEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS---PSEV-SVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d---~~~~-~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+|+++.+. +..++ .+.+ .+.+.+|+..++.+|.+|+|+|.+|..
T Consensus 221 ----------~~~~~~l~~~l~~~gI~i~~~~~v~~i~~~~~~~~~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 283 (472)
T PRK05976 221 ----------AELSKEVARLLKKLGVRVVTGAKVLGLTLKKDGGVLIVAEHNGEEKTLEADKVLVSVGRRPNT 283 (472)
T ss_pred ----------HHHHHHHHHHHHhcCCEEEeCcEEEEEEEecCCCEEEEEEeCCceEEEEeCEEEEeeCCccCC
Confidence 0111223345667799998884 44443 2333 333456655689999999999999853
No 222
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=98.43 E-value=4.4e-06 Score=89.61 Aligned_cols=57 Identities=18% Similarity=0.306 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+...+.+.+++ |++++.+++|+.++..++++.+.+. ++..+.+|.||+|+|....
T Consensus 408 ~~l~~aL~~~a~~-Gv~i~~~~~V~~i~~~~~~~~v~t~-----~g~~~~ad~VV~A~G~~s~ 464 (662)
T PRK01747 408 AELCRALLALAGQ-QLTIHFGHEVARLEREDDGWQLDFA-----GGTLASAPVVVLANGHDAA 464 (662)
T ss_pred HHHHHHHHHhccc-CcEEEeCCEeeEEEEeCCEEEEEEC-----CCcEEECCEEEECCCCCcc
Confidence 4566777777777 9999999999999877777776543 4456789999999997643
No 223
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases.; PDB: 2I0Z_A 3V76_A 2GQF_A.
Probab=98.43 E-value=9.3e-07 Score=88.00 Aligned_cols=96 Identities=22% Similarity=0.372 Sum_probs=66.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC---------------CC--------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS---------------MD-------------------------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---------------~d-------------------------- 254 (507)
+|+|||+|++|+-+|..+++.|.+|.++++.+++... .+
T Consensus 2 dviIIGgGaAGl~aA~~aa~~g~~V~vlE~~~~~gkKil~tG~GrCN~tn~~~~~~~~~~~~~~~~~f~~~~l~~f~~~d 81 (409)
T PF03486_consen 2 DVIIIGGGAAGLMAAITAAEKGARVLVLERNKRVGKKILITGNGRCNLTNLNIDPSEFLSGYGRNPKFLKSALKRFSPED 81 (409)
T ss_dssp SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS-HHHHHCGGGT-EEEETTSSGGGEECS-TBTTTCTHHHHHHS-HHH
T ss_pred cEEEECCCHHHHHHHHHHHhCCCCEEEEeCCcccccceeecCCCCccccccccchhhHhhhcccchHHHHHHHhcCCHHH
Confidence 5899999999999999999999999999999776410 00
Q ss_pred ---------------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCe-EEEEEeecCCCceEEEEcC
Q 010573 255 ---------------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEAD 306 (507)
Q Consensus 255 ---------------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~-v~v~~~~~~~g~~~~i~~D 306 (507)
.++.+.+.+.+++.||+++++++|.+++.++++ +.+.+. +..++.+|
T Consensus 82 ~~~ff~~~Gv~~~~~~~gr~fP~s~~a~~Vv~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~f~v~~~-----~~~~~~a~ 156 (409)
T PF03486_consen 82 LIAFFEELGVPTKIEEDGRVFPKSDKASSVVDALLEELKRLGVEIHFNTRVKSIEKKEDGVFGVKTK-----NGGEYEAD 156 (409)
T ss_dssp HHHHHHHTT--EEE-STTEEEETT--HHHHHHHHHHHHHHHT-EEE-S--EEEEEEETTEEEEEEET-----TTEEEEES
T ss_pred HHHHHHhcCCeEEEcCCCEECCCCCcHHHHHHHHHHHHHHcCCEEEeCCEeeeeeecCCceeEeecc-----CcccccCC
Confidence 345667778888999999999999999987777 667763 45799999
Q ss_pred EEEEeecCCC
Q 010573 307 VVLVSAGRTP 316 (507)
Q Consensus 307 ~vi~a~G~~p 316 (507)
.||+|+|-..
T Consensus 157 ~vILAtGG~S 166 (409)
T PF03486_consen 157 AVILATGGKS 166 (409)
T ss_dssp EEEE----SS
T ss_pred EEEEecCCCC
Confidence 9999999654
No 224
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=98.43 E-value=1e-06 Score=88.53 Aligned_cols=35 Identities=26% Similarity=0.554 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
.+||+||||||+|+++|+.|++.|++|+|+|+.+.
T Consensus 2 ~~dV~IvGaGpaGl~~A~~L~~~G~~v~v~E~~~~ 36 (392)
T PRK08243 2 RTQVAIIGAGPAGLLLGQLLHLAGIDSVVLERRSR 36 (392)
T ss_pred cceEEEECCCHHHHHHHHHHHhcCCCEEEEEcCCc
Confidence 47999999999999999999999999999999764
No 225
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms.
Probab=98.42 E-value=1.3e-05 Score=81.00 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CC-cEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL-GL-KTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~-g~-~V~lie~~~ 76 (507)
..+||+|||||.+|+++|++|++. |. +|+|+|++.
T Consensus 29 ~~~dvvIIGgGi~G~s~A~~L~~~~g~~~V~vle~~~ 65 (407)
T TIGR01373 29 PTYDVIIVGGGGHGLATAYYLAKEHGITNVAVLEKGW 65 (407)
T ss_pred ccCCEEEECCcHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence 568999999999999999999995 85 999999964
No 226
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=98.42 E-value=2.9e-07 Score=91.15 Aligned_cols=35 Identities=40% Similarity=0.689 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
|||+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 2 ~dV~IvGaG~aGl~~A~~L~~~G~~v~i~E~~~~~ 36 (356)
T PF01494_consen 2 YDVAIVGAGPAGLAAALALARAGIDVTIIERRPDP 36 (356)
T ss_dssp EEEEEE--SHHHHHHHHHHHHTTCEEEEEESSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcccccccchhcccc
Confidence 79999999999999999999999999999997654
No 227
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional
Probab=98.42 E-value=7.2e-06 Score=85.12 Aligned_cols=42 Identities=40% Similarity=0.623 Sum_probs=37.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
.++||||||+| ||++||+++++.|.+|+||||.+..||....
T Consensus 6 ~~~DVvVVG~G-aGl~aA~~aa~~G~~V~vlEk~~~~Gg~t~~ 47 (513)
T PRK12837 6 EEVDVLVAGSG-GGVAGAYTAAREGLSVALVEATDKFGGTTAY 47 (513)
T ss_pred CccCEEEECch-HHHHHHHHHHHCCCcEEEEecCCCCCcceec
Confidence 36899999999 9999999999999999999998887876644
No 228
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=98.42 E-value=7.3e-06 Score=83.60 Aligned_cols=95 Identities=18% Similarity=0.221 Sum_probs=66.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||++|+.+|..+++.|.+|+|+++.+.+... ..
T Consensus 157 ~~~vvIIGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~--------------~~------------------------- 197 (438)
T PRK07251 157 PERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTILPR--------------EE------------------------- 197 (438)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCccCCC--------------CC-------------------------
Confidence 458999999999999999999999999999996543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--CEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+.....+.+++.+|+++.+ .+..++. ..+.+. .++ .++.+|.+|+|+|.+|.
T Consensus 198 ----------~~~~~~~~~~l~~~GI~i~~~~~V~~i~~~~~~v~v~-~~g--~~i~~D~viva~G~~p~ 254 (438)
T PRK07251 198 ----------PSVAALAKQYMEEDGITFLLNAHTTEVKNDGDQVLVV-TED--ETYRFDALLYATGRKPN 254 (438)
T ss_pred ----------HHHHHHHHHHHHHcCCEEEcCCEEEEEEecCCEEEEE-ECC--eEEEcCEEEEeeCCCCC
Confidence 001112235567789998877 4455543 334443 334 57999999999999985
No 229
>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion]
Probab=98.41 E-value=4.8e-07 Score=85.93 Aligned_cols=49 Identities=43% Similarity=0.707 Sum_probs=41.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC------CCcEEEEecCCCCCceeccccccc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQL------GLKTTCIEKRGALGGTCLNVGCIP 89 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~~~~p 89 (507)
...+||+|||||||||+||++|++. +.+|+|+||...+||+.+.-.++.
T Consensus 74 ~e~~Dv~IVG~GPAGLsaAIrlKQla~~~~~dlrVcvvEKaa~~GghtlSGavie 128 (621)
T KOG2415|consen 74 SEEVDVVIVGAGPAGLSAAIRLKQLAAKANKDLRVCVVEKAAEVGGHTLSGAVIE 128 (621)
T ss_pred hccccEEEECCCchhHHHHHHHHHHHHhcCCceEEEEEeeccccCCceecceeec
Confidence 4569999999999999999999875 578999999999999877666543
No 230
>PRK07236 hypothetical protein; Provisional
Probab=98.41 E-value=1e-06 Score=88.40 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
+..+||+|||||++|+++|..|++.|++|+|+||.+.
T Consensus 4 ~~~~~ViIVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (386)
T PRK07236 4 MSGPRAVVIGGSLGGLFAALLLRRAGWDVDVFERSPT 40 (386)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3458999999999999999999999999999999753
No 231
>PLN02464 glycerol-3-phosphate dehydrogenase
Probab=98.41 E-value=7e-06 Score=86.85 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEc--CCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS--GDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+..+...+.+..++.|++++.++.|+++..+ ++.+. +++.+..+++..++.+|.||+|+|...
T Consensus 231 p~rl~~al~~~A~~~Ga~i~~~~~V~~l~~~~~~g~v~gV~v~d~~tg~~~~i~a~~VVnAaGaws 296 (627)
T PLN02464 231 DSRLNVALACTAALAGAAVLNYAEVVSLIKDESTGRIVGARVRDNLTGKEFDVYAKVVVNAAGPFC 296 (627)
T ss_pred HHHHHHHHHHHHHhCCcEEEeccEEEEEEEecCCCcEEEEEEEECCCCcEEEEEeCEEEECCCHhH
Confidence 4466777888888999999999999998765 34443 455433333444789999999999653
No 232
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=98.41 E-value=9.3e-06 Score=80.81 Aligned_cols=34 Identities=35% Similarity=0.545 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
+||+|||||.+|+++|++|++.|++|+|+|++..
T Consensus 1 ~dv~IIG~Gi~G~s~A~~L~~~G~~V~vle~~~~ 34 (365)
T TIGR03364 1 YDLIIVGAGILGLAHAYAAARRGLSVTVIERSSR 34 (365)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5999999999999999999999999999999653
No 233
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=98.40 E-value=1.2e-06 Score=88.20 Aligned_cols=34 Identities=35% Similarity=0.594 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC---CCcEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~ 75 (507)
.++||+||||||||+++|+.|++. |++|+|+|+.
T Consensus 2 ~~~dv~IvGaG~aGl~~A~~L~~~~~~G~~v~v~E~~ 38 (395)
T PRK05732 2 SRMDVIIVGGGMAGATLALALSRLSHGGLPVALIEAF 38 (395)
T ss_pred CcCCEEEECcCHHHHHHHHHhhhcccCCCEEEEEeCC
Confidence 358999999999999999999998 9999999994
No 234
>TIGR01789 lycopene_cycl lycopene cyclase. This model represents a family of bacterial lycopene cyclases catalyzing the transformation of lycopene to carotene. These enzymes are found in a limited spectrum of alpha and gamma proteobacteria as well as Flavobacterium.
Probab=98.40 E-value=7.3e-07 Score=88.36 Aligned_cols=37 Identities=27% Similarity=0.619 Sum_probs=34.1
Q ss_pred cEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCce
Q 010573 45 DVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGT 81 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~ 81 (507)
||+|||||+||+++|..|++. |++|+|+|+.+..+|.
T Consensus 1 DviIvGaG~AGl~lA~~L~~~~~g~~V~lle~~~~~~~~ 39 (370)
T TIGR01789 1 DCIIVGGGLAGGLIALRLQRARPDFRIRVIEAGRTIGGN 39 (370)
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCc
Confidence 799999999999999999987 9999999998877763
No 235
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=98.40 E-value=5.8e-06 Score=81.78 Aligned_cols=103 Identities=27% Similarity=0.462 Sum_probs=82.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCC-----------------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMD----------------------------------------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d----------------------------------------- 254 (507)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.+...
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G~~v~i~E~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAGIDVTIIERRPDPRPKGRGIGLSPNSLRILQRLGLLDEILARGSPHEVMRIFFYDGISD 82 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTCEEEEEESSSSCCCSSSSEEEEHHHHHHHHHTTEHHHHHHHSEEECEEEEEEEEETTT
T ss_pred eEEEECCCHHHHHHHHHHHhcccccccchhcccccccccccccccccccccccccchhhhhhhcccccceeeEeecccCC
Confidence 589999999999999999999999999998876531000
Q ss_pred ----------------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcC
Q 010573 255 ----------------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEAD 306 (507)
Q Consensus 255 ----------------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D 306 (507)
..+.+.+.+.+++.|++++++++++.++.+++++.+.+....++..+++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~~~~d~~~~~~~~~~~~~g~~~~i~ad 162 (356)
T PF01494_consen 83 SRIWVENPQIREDMEIDTKGPYGHVIDRPELDRALREEAEERGVDIRFGTRVVSIEQDDDGVTVVVRDGEDGEEETIEAD 162 (356)
T ss_dssp SEEEEEEEEEEEECHSTSGSSCEEEEEHHHHHHHHHHHHHHHTEEEEESEEEEEEEEETTEEEEEEEETCTCEEEEEEES
T ss_pred ccceeeecccceeeeccccCCcchhhhHHHHHHhhhhhhhhhhhhheeeeecccccccccccccccccccCCceeEEEEe
Confidence 3456667777788899999999999999888898888877666666789999
Q ss_pred EEEEeecCCCCC
Q 010573 307 VVLVSAGRTPFT 318 (507)
Q Consensus 307 ~vi~a~G~~p~~ 318 (507)
+||-|.|.+...
T Consensus 163 lvVgADG~~S~v 174 (356)
T PF01494_consen 163 LVVGADGAHSKV 174 (356)
T ss_dssp EEEE-SGTT-HH
T ss_pred eeecccCcccch
Confidence 999999988754
No 236
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. Members of this family are the enzyme 4-hydroxybenzoate 3-monooxygenase, also called p-hydroxybenzoate hydroxylase. It converts 4-hydroxybenzoate + NADPH + molecular oxygen to protocatechuate + NADPH + water. It contains monooxygenase (pfam01360) and FAD binding (pfam01494) domains. Pathways that contain this enzyme include the protocatechuate 4,5-degradation pathway.
Probab=98.39 E-value=1.6e-06 Score=86.91 Aligned_cols=35 Identities=23% Similarity=0.540 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
.+||+||||||+|+++|..|++.|++|+|||+.+.
T Consensus 2 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 36 (390)
T TIGR02360 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQSR 36 (390)
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 37999999999999999999999999999999764
No 237
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=98.39 E-value=8.9e-06 Score=85.51 Aligned_cols=41 Identities=46% Similarity=0.736 Sum_probs=37.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
.++||||||+|.||++||+.+++.|.+|+|+||....||..
T Consensus 10 ~~~DVvVVG~G~AGl~AA~~aae~G~~VivlEk~~~~gG~t 50 (584)
T PRK12835 10 REVDVLVVGSGGGGMTAALTAAARGLDTLVVEKSAHFGGST 50 (584)
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEcCCCCCchH
Confidence 46899999999999999999999999999999988888743
No 238
>TIGR00292 thiazole biosynthesis enzyme. This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine.This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis.
Probab=98.37 E-value=1.2e-05 Score=75.01 Aligned_cols=165 Identities=18% Similarity=0.188 Sum_probs=102.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC----------C----------------------------CCH
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----------S----------------------------MDG 255 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~----------------------------~d~ 255 (507)
.-.|+|||+|+.|+-+|..+++.|.+|.++++.+.+.. . ...
T Consensus 21 ~~DVvIVGgGpAGL~aA~~la~~G~~V~vlEk~~~~Ggg~~~gg~~~~~~~~~~~~~~~l~~~gi~~~~~~~g~~~~~~~ 100 (254)
T TIGR00292 21 ESDVIIVGAGPSGLTAAYYLAKNGLKVCVLERSLAFGGGSWGGGMLFSKIVVEKPAHEILDEFGIRYEDEGDGYVVADSA 100 (254)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCccccCCCcceecccccchHHHHHHHCCCCeeeccCceEEeeHH
Confidence 35699999999999999999999999999998765310 0 012
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCC--eEE-EEEeec------CCCceEEEEcCEEEEeecCCCCCCCCCCccc
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD--GVK-LTLEPA------AGGEKTILEADVVLVSAGRTPFTAGLGLDKI 326 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~--~v~-v~~~~~------~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~ 326 (507)
++.+.+.+...+.|++++.++.+.++..+++ .+. +.+... ...+..++.++.||.|+|.......+..+..
T Consensus 101 el~~~L~~~a~e~GV~I~~~t~V~dli~~~~~~~V~GVv~~~~~v~~~g~~~d~~~i~Ak~VVdATG~~a~v~~~l~~~~ 180 (254)
T TIGR00292 101 EFISTLASKALQAGAKIFNGTSVEDLITRDDTVGVAGVVINWSAIELAGLHVDPLTQRSRVVVDATGHDAEIVAVCAKKI 180 (254)
T ss_pred HHHHHHHHHHHHcCCEEECCcEEEEEEEeCCCCceEEEEeCCccccccCCCCCCEEEEcCEEEEeecCCchHHHHHHHHc
Confidence 3445566667788999999999999876655 233 333210 0113468999999999996643321112222
Q ss_pred CceecC-----CCCeecC-------CCCCCCCCCeEEecCCC----CCCCc--HhHH-HHHHHHHHHHHcC
Q 010573 327 GVETDK-----MGRIPVN-------ERFATNIPGVYAIGDVI----PGPML--AHKA-EEDGVACVEFLAG 378 (507)
Q Consensus 327 gl~~~~-----~G~i~Vd-------~~~~t~~~~IyA~GD~a----~~~~~--~~~A-~~~g~~aa~~i~~ 378 (507)
++.... .+..+.+ ++.+--+||+|++|=.+ +.|.. ...+ ..+|+.||+.++.
T Consensus 181 ~~~~~~~~~~g~~~~~~~~~e~~~~~~t~~~~~g~~~~gm~~~~~~~~~rmgp~fg~m~~sg~~~a~~~~~ 251 (254)
T TIGR00292 181 VLEDQVPKLGGEKSMWAEVAEVAIHENTREVVPNLYVAGMAVAAVHGLPRMGPIFGGMLLSGKHVAEQILE 251 (254)
T ss_pred CcccCCcccCCchhhhhhhhHHHHHhccCcccCCEEEechhhhhhcCCCCcCchHHHHHHhhHHHHHHHHH
Confidence 221111 1122222 11222479999999766 23321 1222 3478888887764
No 239
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=98.36 E-value=5.2e-06 Score=86.23 Aligned_cols=102 Identities=19% Similarity=0.308 Sum_probs=80.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc--CccC-----------C-CCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA--ADIV-----------P-SMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~--~~~~-----------~-~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
...+|+|||||+.|+.+|..+++.|.+|+++... .++. + ...+++.+.+.+.+++.|++++.+++|
T Consensus 211 ~~~dVvIIGgGpAGl~AA~~la~~G~~v~li~~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~gv~i~~~~~V 290 (515)
T TIGR03140 211 DPYDVLVVGGGPAGAAAAIYAARKGLRTAMVAERIGGQVKDTVGIENLISVPYTTGSQLAANLEEHIKQYPIDLMENQRA 290 (515)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCccccCcCcccccccCCCCHHHHHHHHHHHHHHhCCeEEcCCEE
Confidence 3578999999999999999999999999998531 1111 0 134567778888888999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+.+..+++...+++. ++..+.+|.+|+|+|..|...
T Consensus 291 ~~I~~~~~~~~v~~~-----~g~~i~~d~lIlAtGa~~~~~ 326 (515)
T TIGR03140 291 KKIETEDGLIVVTLE-----SGEVLKAKSVIVATGARWRKL 326 (515)
T ss_pred EEEEecCCeEEEEEC-----CCCEEEeCEEEECCCCCcCCC
Confidence 999876666666654 345799999999999987543
No 240
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=98.36 E-value=4.5e-06 Score=86.80 Aligned_cols=101 Identities=15% Similarity=0.255 Sum_probs=80.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc--Ccc--------CC----CCCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA--ADI--------VP----SMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~--~~~--------~~----~~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
..+++|||||+.|+.+|..+++.|.+|++++.. .++ ++ ...+++.+.+.+.+++.|++++.++++.
T Consensus 211 ~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~V~ 290 (517)
T PRK15317 211 PYDVLVVGGGPAGAAAAIYAARKGIRTGIVAERFGGQVLDTMGIENFISVPETEGPKLAAALEEHVKEYDVDIMNLQRAS 290 (517)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCeeeccCcccccCCCCCCCHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 468999999999999999999999999998643 111 01 1245778888899999999999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.+...++...+.+. ++.++.+|.||+|+|.+|...
T Consensus 291 ~I~~~~~~~~V~~~-----~g~~i~a~~vViAtG~~~r~~ 325 (517)
T PRK15317 291 KLEPAAGLIEVELA-----NGAVLKAKTVILATGARWRNM 325 (517)
T ss_pred EEEecCCeEEEEEC-----CCCEEEcCEEEECCCCCcCCC
Confidence 99876666666654 345799999999999988543
No 241
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.36 E-value=2.3e-06 Score=86.30 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
|..+...+.....+.|-+++..++|+.+..+++.+.|++.+..+|...++.++.||.|+|-..
T Consensus 163 daRLv~~~a~~A~~~Ga~il~~~~v~~~~re~~v~gV~~~D~~tg~~~~ira~~VVNAaGpW~ 225 (532)
T COG0578 163 DARLVAANARDAAEHGAEILTYTRVESLRREGGVWGVEVEDRETGETYEIRARAVVNAAGPWV 225 (532)
T ss_pred hHHHHHHHHHHHHhcccchhhcceeeeeeecCCEEEEEEEecCCCcEEEEEcCEEEECCCccH
Confidence 445666667777889999999999999998887445888777777888899999999999654
No 242
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.35 E-value=4.8e-07 Score=93.06 Aligned_cols=43 Identities=44% Similarity=0.590 Sum_probs=39.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
..+|+||||||++||+||..|+++|++|+|+||+..+||.+..
T Consensus 2 ~~~dvvVIGaG~~GL~aAa~LA~~G~~V~VlE~~~~~GG~a~t 44 (487)
T COG1233 2 PMYDVVVIGAGLNGLAAAALLARAGLKVTVLEKNDRVGGRART 44 (487)
T ss_pred CCccEEEECCChhHHHHHHHHHhCCCEEEEEEecCCCCcceEE
Confidence 3589999999999999999999999999999999999997754
No 243
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning]
Probab=98.35 E-value=5.2e-07 Score=89.10 Aligned_cols=137 Identities=26% Similarity=0.363 Sum_probs=77.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHH-------HHHhhhhhCCccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYH-------EAMHSFASHGVKF 114 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~-------~~~~~~~~~g~~~ 114 (507)
..|||+|||||.||..||..++|.|++++|+--+-..=| ...|.|+.--....+..+ .+-......++.+
T Consensus 3 ~~~DVIVIGgGHAG~EAA~AaARmG~ktlLlT~~~dtig---~msCNPaIGG~~KG~lvrEIDALGG~Mg~~~D~~~IQ~ 79 (621)
T COG0445 3 KEYDVIVIGGGHAGVEAALAAARMGAKTLLLTLNLDTIG---EMSCNPAIGGPGKGHLVREIDALGGLMGKAADKAGIQF 79 (621)
T ss_pred CCCceEEECCCccchHHHHhhhccCCeEEEEEcCCCcee---ecccccccCCcccceeEEeehhccchHHHhhhhcCCch
Confidence 359999999999999999999999999999876532212 234555221111111100 0111122233333
Q ss_pred Cccc------cChHHHHHHHHHHHHHHHHHHHHHH-HhCCcEEEEeEEEEe---cCC-EEEEEccCCceEEEEeCeEEEc
Q 010573 115 SSVE------VDLPAMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKGYGKFI---SPS-EVSVDTIEGGNTVVKGKNIIIA 183 (507)
Q Consensus 115 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~---d~~-~~~v~~~~g~~~~~~~d~lvlA 183 (507)
..+. +.-.+....+ ..+...++..+ ...+++++.+.+..+ +.+ -+-|.+.+| ..+.++.|||+
T Consensus 80 r~LN~sKGPAVra~RaQaDk----~~Y~~~mk~~le~~~NL~l~q~~v~dli~e~~~~v~GV~t~~G--~~~~a~aVVlT 153 (621)
T COG0445 80 RMLNSSKGPAVRAPRAQADK----WLYRRAMKNELENQPNLHLLQGEVEDLIVEEGQRVVGVVTADG--PEFHAKAVVLT 153 (621)
T ss_pred hhccCCCcchhcchhhhhhH----HHHHHHHHHHHhcCCCceehHhhhHHHhhcCCCeEEEEEeCCC--CeeecCEEEEe
Confidence 2111 1111111111 11223334333 345899999877543 222 355778888 89999999999
Q ss_pred cCCC
Q 010573 184 TGSD 187 (507)
Q Consensus 184 tG~~ 187 (507)
||.-
T Consensus 154 TGTF 157 (621)
T COG0445 154 TGTF 157 (621)
T ss_pred eccc
Confidence 9963
No 244
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=98.34 E-value=1.7e-06 Score=86.69 Aligned_cols=33 Identities=36% Similarity=0.662 Sum_probs=31.2
Q ss_pred cEEEECCChHHHHHHHHHHHCC-CcEEEEecCCC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGA 77 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~ 77 (507)
||+||||||+|+++|..|++.| ++|+|+|+.+.
T Consensus 1 dv~IvGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 34 (382)
T TIGR01984 1 DVIIVGGGLVGLSLALALSRLGKIKIALIEANSP 34 (382)
T ss_pred CEEEECccHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 7999999999999999999999 99999999754
No 245
>PRK06185 hypothetical protein; Provisional
Probab=98.34 E-value=2.1e-06 Score=86.88 Aligned_cols=38 Identities=29% Similarity=0.634 Sum_probs=34.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
+...+||+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 3 ~~~~~dV~IvGgG~~Gl~~A~~La~~G~~v~liE~~~~ 40 (407)
T PRK06185 3 EVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHAD 40 (407)
T ss_pred ccccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCc
Confidence 34568999999999999999999999999999999653
No 246
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=98.33 E-value=3.2e-06 Score=86.50 Aligned_cols=102 Identities=21% Similarity=0.340 Sum_probs=74.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCcc------CCCC-----C--HHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADI------VPSM-----D--GEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~------~~~~-----d--~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
++++|||+|+.|+.+|..|++.+ .+|+++++.+.+ ++.+ + .++.....+.+++.|++++.++.|+
T Consensus 1 ~~vvIIGgG~aGl~aA~~l~~~~~~~~Vtli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~V~ 80 (444)
T PRK09564 1 MKIIIIGGTAAGMSAAAKAKRLNKELEITVYEKTDIVSFGACGLPYFVGGFFDDPNTMIARTPEEFIKSGIDVKTEHEVV 80 (444)
T ss_pred CeEEEECCcHHHHHHHHHHHHHCCCCcEEEEECCCcceeecCCCceEeccccCCHHHhhcCCHHHHHHCCCeEEecCEEE
Confidence 47999999999999999999886 489999988753 1111 1 1223333466778899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEE--cCEEEEeecCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILE--ADVVLVSAGRTPFTAG 320 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~--~D~vi~a~G~~p~~~~ 320 (507)
+++.+++.+.+. +.. ++.++. +|.+|+|+|.+|+...
T Consensus 81 ~id~~~~~v~~~--~~~--~~~~~~~~yd~lviAtG~~~~~~~ 119 (444)
T PRK09564 81 KVDAKNKTITVK--NLK--TGSIFNDTYDKLMIATGARPIIPP 119 (444)
T ss_pred EEECCCCEEEEE--ECC--CCCEEEecCCEEEECCCCCCCCCC
Confidence 998776665554 211 233455 9999999999987653
No 247
>PRK12843 putative FAD-binding dehydrogenase; Reviewed
Probab=98.31 E-value=8.2e-05 Score=78.36 Aligned_cols=44 Identities=43% Similarity=0.591 Sum_probs=40.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG 86 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~ 86 (507)
++||+|||+|++|++||..+++.|++|+||||....||.+...+
T Consensus 16 ~~dvvvvG~G~aG~~aa~~~~~~g~~v~l~ek~~~~gg~~~~s~ 59 (578)
T PRK12843 16 EFDVIVIGAGAAGMSAALFAAIAGLKVLLVERTEYVGGTTATSA 59 (578)
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccC
Confidence 58999999999999999999999999999999888898876554
No 248
>PRK07045 putative monooxygenase; Reviewed
Probab=98.31 E-value=1.8e-06 Score=86.77 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
..+||+||||||+|+++|..|++.|++|+|+|+.+..
T Consensus 4 ~~~~V~IiGgGpaGl~~A~~L~~~G~~v~v~E~~~~~ 40 (388)
T PRK07045 4 NPVDVLINGSGIAGVALAHLLGARGHSVTVVERAARN 40 (388)
T ss_pred ceeEEEEECCcHHHHHHHHHHHhcCCcEEEEeCCCcc
Confidence 4589999999999999999999999999999997754
No 249
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional
Probab=98.30 E-value=2.5e-05 Score=73.15 Aligned_cols=165 Identities=21% Similarity=0.209 Sum_probs=101.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-------------------------------------CC-H
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-------------------------------------MD-G 255 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------------------------------~d-~ 255 (507)
.-.|+|||+|+.|+-+|..+++.|.+|.++++.+.+... .+ .
T Consensus 25 ~~DVvIVGgGpAGl~AA~~la~~G~~V~liEk~~~~Ggg~~~gg~~~~~~~v~~~~~~~l~~~gv~~~~~~~g~~~vd~~ 104 (257)
T PRK04176 25 EVDVAIVGAGPSGLTAAYYLAKAGLKVAVFERKLSFGGGMWGGGMLFNKIVVQEEADEILDEFGIRYKEVEDGLYVADSV 104 (257)
T ss_pred cCCEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCccccccccchHHHHHHHHHCCCCceeecCcceeccHH
Confidence 357999999999999999999999999999987653110 01 2
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCC-eEE-EEEeec------CCCceEEEEcCEEEEeecCCCCCCCCCCcc--
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD-GVK-LTLEPA------AGGEKTILEADVVLVSAGRTPFTAGLGLDK-- 325 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~-v~~~~~------~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~-- 325 (507)
++...+.+...+.|++++.++.+.++..+++ .+. +.+... ...+..++.++.||.|+|..........+.
T Consensus 105 ~l~~~L~~~A~~~Gv~I~~~t~V~dl~~~~~g~V~Gvv~~~~~v~~~g~~~~~~~i~Ak~VI~ATG~~a~v~~~l~~~~~ 184 (257)
T PRK04176 105 EAAAKLAAAAIDAGAKIFNGVSVEDVILREDPRVAGVVINWTPVEMAGLHVDPLTIEAKAVVDATGHDAEVVSVLARKGP 184 (257)
T ss_pred HHHHHHHHHHHHcCCEEEcCceeceeeEeCCCcEEEEEEccccccccCCCCCcEEEEcCEEEEEeCCCcHHHHHHHHHcC
Confidence 3445566667778999999999999876544 332 322210 111346899999999999654332110010
Q ss_pred -cCceecCCCCee--------cCCCCCCCCCCeEEecCCC----CCCCc--Hh-HHHHHHHHHHHHHcCC
Q 010573 326 -IGVETDKMGRIP--------VNERFATNIPGVYAIGDVI----PGPML--AH-KAEEDGVACVEFLAGK 379 (507)
Q Consensus 326 -~gl~~~~~G~i~--------Vd~~~~t~~~~IyA~GD~a----~~~~~--~~-~A~~~g~~aa~~i~~~ 379 (507)
.+.........+ |+..-+ -.||+|++|=.+ +.|.. .. .=..+|+.||+.++.+
T Consensus 185 ~~~~~~~g~~~~~~~~~e~~v~~~t~~-~~~g~~~~gm~~~~~~~~~rmg~~fg~m~~sg~~~a~~~~~~ 253 (257)
T PRK04176 185 ELGIEVPGEKSMWAERGEKLVVENTGE-VYPGLYVAGMAANAVHGLPRMGPIFGGMLLSGKKVAELILEK 253 (257)
T ss_pred CcccccCCccccccCchHHHHHhcCCe-EcCCEEEeehhhhhhcCCCccCchhHhHHHhHHHHHHHHHHH
Confidence 111111111222 222222 379999999776 23321 11 2234788888877643
No 250
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=98.30 E-value=4e-06 Score=84.26 Aligned_cols=98 Identities=10% Similarity=0.168 Sum_probs=71.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCcc---CCCCCHHHH---------HHHHHHHHhcCcEEEcCceEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADI---VPSMDGEIR---------KQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~---~~~~d~~~~---------~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
.++++|||+|+.|+.+|..|++.|. +|+++++.+.. .+.+.+.+. ..-.+.+.+.||+++.++.|+
T Consensus 3 ~~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li~~e~~~~y~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~V~ 82 (396)
T PRK09754 3 EKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQQVLPANWWQENNVHLHSGVTIK 82 (396)
T ss_pred cCcEEEECChHHHHHHHHHHHhhCCCCCEEEeCCCCCCCCCCCCCCHHHHCCCCccccccCCHHHHHHCCCEEEcCCEEE
Confidence 4689999999999999999999875 78999876543 122222211 001244667899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+..++.. +.+. +++++.+|.+|+|||.+|..
T Consensus 83 ~id~~~~~--v~~~-----~g~~~~yd~LViATGs~~~~ 114 (396)
T PRK09754 83 TLGRDTRE--LVLT-----NGESWHWDQLFIATGAAARP 114 (396)
T ss_pred EEECCCCE--EEEC-----CCCEEEcCEEEEccCCCCCC
Confidence 99765433 3333 45689999999999999864
No 251
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=98.28 E-value=1.1e-05 Score=60.79 Aligned_cols=34 Identities=47% Similarity=0.537 Sum_probs=31.4
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
+++|||||+.|+.+|..|++.|.+|+||++.+.+
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 4899999999999999999999999999997654
No 252
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism]
Probab=98.28 E-value=6.1e-06 Score=82.13 Aligned_cols=39 Identities=31% Similarity=0.546 Sum_probs=36.5
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceec
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCL 83 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~ 83 (507)
+++|||||++||+||++|++.+ .+|+|+|+.+++||...
T Consensus 2 ~i~IiG~GiaGLsaAy~L~k~~p~~~i~lfE~~~r~GG~l~ 42 (444)
T COG1232 2 KIAIIGGGIAGLSAAYRLQKAGPDVEVTLFEADDRVGGLLR 42 (444)
T ss_pred eEEEECCcHHHHHHHHHHHHhCCCCcEEEEecCCCCCceEE
Confidence 6999999999999999999998 99999999999999754
No 253
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.27 E-value=1e-06 Score=89.64 Aligned_cols=44 Identities=32% Similarity=0.564 Sum_probs=40.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
....++|+|||||+|||+||.+|.+.|++|+|+|.++++||...
T Consensus 12 ~~~~~~VIVIGAGiaGLsAArqL~~~G~~V~VLEARdRvGGRI~ 55 (501)
T KOG0029|consen 12 AGKKKKVIVIGAGLAGLSAARQLQDFGFDVLVLEARDRVGGRIY 55 (501)
T ss_pred ccCCCcEEEECCcHHHHHHHHHHHHcCCceEEEeccCCcCceeE
Confidence 34567999999999999999999999999999999999999754
No 254
>PRK06753 hypothetical protein; Provisional
Probab=98.27 E-value=3.1e-06 Score=84.51 Aligned_cols=35 Identities=29% Similarity=0.474 Sum_probs=32.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
+||+||||||||+++|..|++.|++|+|+|+++.+
T Consensus 1 ~~V~IvGgG~aGl~~A~~L~~~g~~v~v~E~~~~~ 35 (373)
T PRK06753 1 MKIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESV 35 (373)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEecCCcc
Confidence 37999999999999999999999999999997754
No 255
>PLN02985 squalene monooxygenase
Probab=98.27 E-value=5.5e-06 Score=85.59 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
...+||+|||||++|+++|..|++.|++|+|+||..
T Consensus 41 ~~~~DViIVGAG~aGlalA~aLa~~G~~V~vlEr~~ 76 (514)
T PLN02985 41 DGATDVIIVGAGVGGSALAYALAKDGRRVHVIERDL 76 (514)
T ss_pred CCCceEEEECCCHHHHHHHHHHHHcCCeEEEEECcC
Confidence 345899999999999999999999999999999964
No 256
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=98.26 E-value=1.8e-05 Score=81.54 Aligned_cols=98 Identities=20% Similarity=0.221 Sum_probs=67.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..|++.|.+|+|+++.+.+... . .
T Consensus 183 ~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~------~-------d-------------------------- 223 (475)
T PRK06327 183 PKKLAVIGAGVIGLELGSVWRRLGAEVTILEALPAFLAA------A-------D-------------------------- 223 (475)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCccCCc------C-------C--------------------------
Confidence 358999999999999999999999999999985533110 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccC--CceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIE--GGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~--g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..++ ...+.+...+ |+...+.+|.|++|+|.+|.
T Consensus 224 ----------~~~~~~~~~~l~~~gi~i~~~~~v~~i~~~~~~v~v~~~~~~g~~~~i~~D~vl~a~G~~p~ 285 (475)
T PRK06327 224 ----------EQVAKEAAKAFTKQGLDIHLGVKIGEIKTGGKGVSVAYTDADGEAQTLEVDKLIVSIGRVPN 285 (475)
T ss_pred ----------HHHHHHHHHHHHHcCcEEEeCcEEEEEEEcCCEEEEEEEeCCCceeEEEcCEEEEccCCccC
Confidence 001112234456678998877 444443 3344454433 44467999999999999986
No 257
>PRK07208 hypothetical protein; Provisional
Probab=98.26 E-value=1.1e-06 Score=90.75 Aligned_cols=45 Identities=31% Similarity=0.560 Sum_probs=40.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
|+.++||+|||||++||+||+.|+++|++|+|+|+.+.+||.+..
T Consensus 1 ~~~~~~vvIiGaGisGL~aA~~L~~~g~~v~v~E~~~~~GG~~~s 45 (479)
T PRK07208 1 MTNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRT 45 (479)
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCceeee
Confidence 345679999999999999999999999999999999999998643
No 258
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase. The gene is known as glf, ceoA, and rfbD. It is known experimentally in E. coli, Mycobacterium tuberculosis, and Klebsiella pneumoniae.
Probab=98.25 E-value=1.3e-06 Score=85.85 Aligned_cols=43 Identities=35% Similarity=0.584 Sum_probs=39.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV 85 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 85 (507)
++|++|||||++|+++|.+|++.|.+|+|+|+++.+||.|.+.
T Consensus 1 ~~DvvIIGaG~aGlsaA~~La~~G~~V~viEk~~~iGG~~~~~ 43 (377)
T TIGR00031 1 MFDYIIVGAGLSGIVLANILAQLNKRVLVVEKRNHIGGNCYDE 43 (377)
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCceeee
Confidence 3799999999999999999999999999999999999988653
No 259
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase. This model represents an orthologous set of proteins present in relatively few bacteria but very tightly conserved where it occurs. It is closely related to gidA (glucose-inhibited division protein A), which appears to be present in all complete eubacterial genomes so far and in Saccharomyces cerevisiae. It was designated gid but is now recognized as a tRNA:m(5)U-54 methyltransferase and is now designated trmFO.
Probab=98.23 E-value=2.9e-06 Score=84.11 Aligned_cols=36 Identities=39% Similarity=0.375 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
.||+|||||++|+.+|..|++.|++|+|||+.+..+
T Consensus 1 ~~VvVIGgGlAGleaA~~LAr~G~~V~LiE~rp~~~ 36 (433)
T TIGR00137 1 TPVHVIGGGLAGSEAAWQLAQAGVPVILYEMRPEKL 36 (433)
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEecccccc
Confidence 379999999999999999999999999999866543
No 260
>PRK05868 hypothetical protein; Validated
Probab=98.23 E-value=6.6e-06 Score=81.90 Aligned_cols=35 Identities=31% Similarity=0.391 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
.||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 2 ~~V~IvGgG~aGl~~A~~L~~~G~~v~viE~~~~~ 36 (372)
T PRK05868 2 KTVVVSGASVAGTAAAYWLGRHGYSVTMVERHPGL 36 (372)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Confidence 58999999999999999999999999999997654
No 261
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=98.22 E-value=1.1e-05 Score=82.17 Aligned_cols=104 Identities=17% Similarity=0.240 Sum_probs=72.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCcc--CC-CCCHH-------HHHHH----HHHHHhcCcEEEcCceE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADI--VP-SMDGE-------IRKQF----QRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~--~~-~~d~~-------~~~~~----~~~l~~~Gv~i~~~~~v 278 (507)
++|+|||+|+.|+.+|..+++. +.+|+++++.+.+ .+ .++.- ..+.+ ....++.|++++.+++|
T Consensus 2 ~~VVIIGgG~aG~~aA~~l~~~~~~~~I~li~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~V 81 (438)
T PRK13512 2 PKIIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYYIGEVVEDRKYALAYTPEKFYDRKQITVKTYHEV 81 (438)
T ss_pred CeEEEECCcHHHHHHHHHHHhhCCCCCEEEEECCCCcccccCCcchhhcCccCCHHHcccCCHHHHHHhCCCEEEeCCEE
Confidence 4799999999999999999887 5789999988653 11 11110 01111 22335679999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+++..+++.+.+. +..+++..++.+|.+|+|||.+|+...
T Consensus 82 ~~Id~~~~~v~~~--~~~~~~~~~~~yd~lviAtGs~~~~~~ 121 (438)
T PRK13512 82 IAINDERQTVTVL--NRKTNEQFEESYDKLILSPGASANSLG 121 (438)
T ss_pred EEEECCCCEEEEE--ECCCCcEEeeecCEEEECCCCCCCCCC
Confidence 9998776655554 322223345789999999999997653
No 262
>PRK07236 hypothetical protein; Provisional
Probab=98.22 E-value=9.1e-06 Score=81.50 Aligned_cols=100 Identities=22% Similarity=0.320 Sum_probs=75.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC------CCHHHHHHHHH------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS------MDGEIRKQFQR------------------------ 263 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------~d~~~~~~~~~------------------------ 263 (507)
+.+|+|||+|+.|+.+|..|++.|.+|+++++.+...+. +.+...+.+.+
T Consensus 6 ~~~ViIVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~g~gi~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~g~ 85 (386)
T PRK07236 6 GPRAVVIGGSLGGLFAALLLRRAGWDVDVFERSPTELDGRGAGIVLQPELLRALAEAGVALPADIGVPSRERIYLDRDGR 85 (386)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCcCCCCceeEeCHHHHHHHHHcCCCcccccccCccceEEEeCCCC
Confidence 578999999999999999999999999999988643221 23332222221
Q ss_pred -------------------HHHh--cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 264 -------------------SLEK--QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 264 -------------------~l~~--~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.|.+ .+++++.++.+++++.+++++.+++. +++++.+|.||.|-|.....
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~ad~vIgADG~~S~v 156 (386)
T PRK07236 86 VVQRRPMPQTQTSWNVLYRALRAAFPAERYHLGETLVGFEQDGDRVTARFA-----DGRRETADLLVGADGGRSTV 156 (386)
T ss_pred EeeccCCCccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCeEEEEEC-----CCCEEEeCEEEECCCCCchH
Confidence 1111 13568899999999888888888876 45689999999999987655
No 263
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=98.22 E-value=3.1e-05 Score=77.75 Aligned_cols=38 Identities=42% Similarity=0.475 Sum_probs=34.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
.++||+|||||.+|+++|++|++.|.+|+++|++...+
T Consensus 3 ~~~~vvVIGgGi~Gls~A~~La~~G~~V~vie~~~~~~ 40 (387)
T COG0665 3 MKMDVVIIGGGIVGLSAAYYLAERGADVTVLEAGEAGG 40 (387)
T ss_pred CcceEEEECCcHHHHHHHHHHHHcCCEEEEEecCccCC
Confidence 45899999999999999999999999999999966443
No 264
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only]
Probab=98.22 E-value=5.5e-06 Score=77.23 Aligned_cols=43 Identities=28% Similarity=0.347 Sum_probs=38.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
.....+|.|||+|.+|++||+.|.++ ++|+|+|.+.++||...
T Consensus 5 ~~~r~~IAVIGsGisGLSAA~~Ls~r-hdVTLfEA~~rlGGha~ 47 (447)
T COG2907 5 PHPRRKIAVIGSGISGLSAAWLLSRR-HDVTLFEADRRLGGHAN 47 (447)
T ss_pred CCCCcceEEEcccchhhhhHHhhhcc-cceEEEeccccccCccc
Confidence 34557999999999999999999986 99999999999999754
No 265
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=98.21 E-value=1.7e-05 Score=76.23 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=77.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC------------------------------------------C-
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------------------S- 252 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------~- 252 (507)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 2 dv~IiGaG~aGl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T TIGR02032 2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRVLEELDLPLELIVNLVRGARFFSPNGDSVEIPIE 81 (295)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCcccccCccCHhHHHHhcCCchhhhhheeeEEEEcCCCcEEEeccC
Confidence 489999999999999999999999999998754210 0
Q ss_pred ------C-CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 ------M-DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 ------~-d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+ ...+.+.+.+.+++.|++++.+++++++..+++++.+.+.. ++.++.+|.||.|+|....
T Consensus 82 ~~~~~~i~r~~l~~~l~~~~~~~gv~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~a~~vv~a~G~~s~ 149 (295)
T TIGR02032 82 TELAYVIDRDAFDEQLAERAQEAGAELRLGTTVLDVEIHDDRVVVIVRG----GEGTVTAKIVIGADGSRSI 149 (295)
T ss_pred CCcEEEEEHHHHHHHHHHHHHHcCCEEEeCcEEeeEEEeCCEEEEEEcC----ccEEEEeCEEEECCCcchH
Confidence 1 12455667777788899999999999998777777766542 3468999999999998653
No 266
>PRK06996 hypothetical protein; Provisional
Probab=98.19 E-value=5.8e-06 Score=83.26 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC----CcEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLG----LKTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g----~~V~lie~~~ 76 (507)
..+||+||||||+|+++|..|++.| ++|+|+|+.+
T Consensus 10 ~~~dv~IvGgGpaG~~~A~~L~~~g~~~g~~v~l~e~~~ 48 (398)
T PRK06996 10 PDFDIAIVGAGPVGLALAGWLARRSATRALSIALIDARE 48 (398)
T ss_pred CCCCEEEECcCHHHHHHHHHHhcCCCcCCceEEEecCCC
Confidence 3579999999999999999999986 4799999964
No 267
>PRK06834 hypothetical protein; Provisional
Probab=98.18 E-value=2.5e-05 Score=80.50 Aligned_cols=99 Identities=19% Similarity=0.312 Sum_probs=77.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---C---CCC----------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---P---SMD---------------------------------- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~---~~d---------------------------------- 254 (507)
..|+|||+|++|+-+|..|++.|.+|+++++.+... + .+.
T Consensus 4 ~dVlIVGaGp~Gl~lA~~La~~G~~v~vlEr~~~~~~~~~Ra~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~ 83 (488)
T PRK06834 4 HAVVIAGGGPTGLMLAGELALAGVDVAIVERRPNQELVGSRAGGLHARTLEVLDQRGIADRFLAQGQVAQVTGFAATRLD 83 (488)
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCCCcceeeECHHHHHHHHHcCcHHHHHhcCCccccceeeeEecc
Confidence 469999999999999999999999999999865321 0 000
Q ss_pred ----------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 255 ----------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 255 ----------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
..+.+.+.+.+++.|++++.++++++++.+++++.+++. ++.++.+|.||.|.|..+..
T Consensus 84 ~~~~~~~~~~~~~i~q~~le~~L~~~l~~~gv~i~~~~~v~~v~~~~~~v~v~~~-----~g~~i~a~~vVgADG~~S~v 158 (488)
T PRK06834 84 ISDFPTRHNYGLALWQNHIERILAEWVGELGVPIYRGREVTGFAQDDTGVDVELS-----DGRTLRAQYLVGCDGGRSLV 158 (488)
T ss_pred cccCCCCCCccccccHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEcCCeEEEEEC-----CCCEEEeCEEEEecCCCCCc
Confidence 123344556667779999999999999988888887764 34589999999999998754
No 268
>PLN02529 lysine-specific histone demethylase 1
Probab=98.17 E-value=2.7e-06 Score=90.28 Aligned_cols=46 Identities=28% Similarity=0.528 Sum_probs=40.9
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 38 ASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 38 ~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
++....+||+|||||++|++||..|++.|++|+|+|+++++||.+.
T Consensus 155 ~~~~~~~~v~viGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 200 (738)
T PLN02529 155 PEEGTEGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGGRVY 200 (738)
T ss_pred CcccCCCCEEEECcCHHHHHHHHHHHHcCCcEEEEecCccCcCcee
Confidence 3444568999999999999999999999999999999999988764
No 269
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=98.16 E-value=3.8e-06 Score=75.87 Aligned_cols=105 Identities=24% Similarity=0.410 Sum_probs=74.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc---CCCCCH-----------HHH--H--HHHHHHHhcCcEEEcCce
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI---VPSMDG-----------EIR--K--QFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---~~~~d~-----------~~~--~--~~~~~l~~~Gv~i~~~~~ 277 (507)
+|+|||+|+.|+.+|..|++.+.+++++++.+.. ...+.. ... . .+.+.+...+++++.+++
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 80 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPGAKVLIIEKSPGTPYNSGCIPSPLLVEIAPHRHEFLPARLFKLVDQLKNRGVEIRLNAK 80 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEESSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGHHHHHHHHHTHEEEHHHT
T ss_pred CEEEEecHHHHHHHHHHHhcCCCeEEEEecccccccccccccccccccccccccccccccccccccccccceEEEeeccc
Confidence 5899999999999999999999999999766532 010000 011 1 344455678999999999
Q ss_pred EEEEEEcCCeEE---EEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 278 VVGVDLSGDGVK---LTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 278 v~~i~~~~~~v~---v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.++....+.+. +.+.....+++.++.+|.+|+|+|..|+...
T Consensus 81 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 126 (201)
T PF07992_consen 81 VVSIDPESKRVVCPAVTIQVVETGDGREIKYDYLVIATGSRPRTPN 126 (201)
T ss_dssp EEEEEESTTEEEETCEEEEEEETTTEEEEEEEEEEEESTEEEEEES
T ss_pred cccccccccccccCcccceeeccCCceEecCCeeeecCccccceee
Confidence 999987776431 1111112346789999999999999987654
No 270
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=98.16 E-value=5.3e-06 Score=81.74 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=32.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
.||+|||||++|+.||+.|++.|++|+|+|+.+..
T Consensus 3 ~dVvVIGGGlAGleAAlaLAr~Gl~V~LiE~rp~~ 37 (436)
T PRK05335 3 KPVNVIGAGLAGSEAAWQLAKRGVPVELYEMRPVK 37 (436)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEEccCcc
Confidence 58999999999999999999999999999986543
No 271
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=98.15 E-value=7.8e-06 Score=82.82 Aligned_cols=35 Identities=31% Similarity=0.515 Sum_probs=31.8
Q ss_pred cEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALG 79 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~G 79 (507)
+|+|||||++|+++|..|++.| .+|+|+||.+.++
T Consensus 2 ~V~IiGgGiaGla~A~~L~~~g~~~v~v~Er~~~~~ 37 (414)
T TIGR03219 2 RVAIIGGGIAGVALALNLCKHSHLNVQLFEAAPAFG 37 (414)
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCEEEEecCCcCC
Confidence 7999999999999999999998 5999999977653
No 272
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Probab=98.15 E-value=6.5e-06 Score=83.88 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHH----CCCcEEEEecCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQ----LGLKTTCIEKRG 76 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~----~g~~V~lie~~~ 76 (507)
|||+||||||+|+++|..|++ .|++|+|||+++
T Consensus 1 ~DV~IVGaGp~Gl~~A~~La~~~~~~G~~v~viE~~~ 37 (437)
T TIGR01989 1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVD 37 (437)
T ss_pred CcEEEECCcHHHHHHHHHHhcCcccCCCeEEEEeCCC
Confidence 699999999999999999998 799999999943
No 273
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=98.14 E-value=2.2e-05 Score=80.49 Aligned_cols=97 Identities=20% Similarity=0.283 Sum_probs=66.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||++|+.+|..+++.|.+|+|+++.+.+.. . .+
T Consensus 170 ~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~ll~---------~----------------------------~d-- 210 (458)
T PRK06912 170 PSSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLP---------G----------------------------ED-- 210 (458)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCc---------c----------------------------cc--
Confidence 35899999999999999999999999999998543311 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCC--EEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~--~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..++.+ .+.+. .+++..++.+|.|++|+|.+|.
T Consensus 211 ----------~e~~~~l~~~L~~~GI~i~~~~~V~~i~~~~~~v~~~-~~g~~~~i~~D~vivA~G~~p~ 269 (458)
T PRK06912 211 ----------EDIAHILREKLENDGVKIFTGAALKGLNSYKKQALFE-YEGSIQEVNAEFVLVSVGRKPR 269 (458)
T ss_pred ----------HHHHHHHHHHHHHCCCEEEECCEEEEEEEcCCEEEEE-ECCceEEEEeCEEEEecCCccC
Confidence 0111223455667799998874 4445433 23333 2343457999999999999885
No 274
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only]
Probab=98.14 E-value=2.5e-05 Score=72.76 Aligned_cols=37 Identities=27% Similarity=0.348 Sum_probs=33.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
|....|++|||||.-|+++|++|++.|.+++++|+.+
T Consensus 4 ~~~~~~viiVGAGVfG~stAyeLaK~g~killLeqf~ 40 (399)
T KOG2820|consen 4 MVKSRDVIIVGAGVFGLSTAYELAKRGDKILLLEQFP 40 (399)
T ss_pred cccceeEEEEcccccchHHHHHHHhcCCeEEEEeccC
Confidence 4456899999999999999999999999999999955
No 275
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in Escherichia coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase []. ; GO: 0008924 malate dehydrogenase (quinone) activity, 0006099 tricarboxylic acid cycle, 0055114 oxidation-reduction process
Probab=98.14 E-value=5.2e-05 Score=74.38 Aligned_cols=97 Identities=28% Similarity=0.452 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHhc-CcEEEcCceEEEEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCcee-cC
Q 010573 256 EIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVET-DK 332 (507)
Q Consensus 256 ~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~-~~ 332 (507)
.+.+.+.+.+.+. |++++++++|+.++..+++ ..|.+.+..+++..++.++.|++..|-..-. + +++.|++- ..
T Consensus 182 ~LTr~l~~~l~~~~~~~~~~~~eV~~i~r~~dg~W~v~~~~~~~~~~~~v~a~FVfvGAGG~aL~-L--Lqksgi~e~~g 258 (488)
T PF06039_consen 182 ALTRQLVEYLQKQKGFELHLNHEVTDIKRNGDGRWEVKVKDLKTGEKREVRAKFVFVGAGGGALP-L--LQKSGIPEGKG 258 (488)
T ss_pred HHHHHHHHHHHhCCCcEEEecCEeCeeEECCCCCEEEEEEecCCCCeEEEECCEEEECCchHhHH-H--HHHcCChhhcc
Confidence 4455556666666 9999999999999988776 7888877777788899999999999865422 2 56777642 22
Q ss_pred CCCeecC-CCCCCCCC--------CeEEecCC
Q 010573 333 MGRIPVN-ERFATNIP--------GVYAIGDV 355 (507)
Q Consensus 333 ~G~i~Vd-~~~~t~~~--------~IyA~GD~ 355 (507)
-|+..|. .+++++.| -||-.-.+
T Consensus 259 yggfPVsG~fl~~~n~~vv~~H~aKVYgka~v 290 (488)
T PF06039_consen 259 YGGFPVSGQFLRCKNPEVVAQHNAKVYGKASV 290 (488)
T ss_pred cCCCcccceEEecCCHHHHHHhcceeeeeCCC
Confidence 2444443 45666544 36665554
No 276
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=98.13 E-value=2.2e-05 Score=79.85 Aligned_cols=97 Identities=24% Similarity=0.247 Sum_probs=67.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+|+|||||++|+.+|..|++.|.+|+++++.+.+... . .+
T Consensus 137 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~~~~-------------~-----------------------~~-- 178 (427)
T TIGR03385 137 VENVVIIGGGYIGIEMAEALRERGKNVTLIHRSERILNK-------------L-----------------------FD-- 178 (427)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCcEEEEECCcccCcc-------------c-----------------------cC--
Confidence 358999999999999999999999999999985432100 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.||+++.+ .+..++.+...+.+.+| .++.+|.||+|+|.+|.
T Consensus 179 ----------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~ 234 (427)
T TIGR03385 179 ----------EEMNQIVEEELKKHEINLRLNEEVDSIEGEERVKVFTSG--GVYQADMVILATGIKPN 234 (427)
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCCEEEEEecCCCEEEEcCC--CEEEeCEEEECCCccCC
Confidence 011122345566789998876 45555544433344566 57999999999999885
No 277
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only]
Probab=98.13 E-value=2.6e-05 Score=75.71 Aligned_cols=82 Identities=18% Similarity=0.280 Sum_probs=61.4
Q ss_pred HHhcCCeeEEE-cccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEE
Q 010573 233 WARLGSEVTVV-EFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLV 310 (507)
Q Consensus 233 l~~~g~~Vtlv-~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~ 310 (507)
+...|+...++ .+.+++....-+.+.+.+.+.+++.|++++++++|..++..++.+. +.++ ++.++++|.||+
T Consensus 150 ~~aa~a~~eil~~~~rHiGTD~l~~vvkni~~~l~~~G~ei~f~t~VeDi~~~~~~~~~v~~~-----~g~~i~~~~vvl 224 (486)
T COG2509 150 FRAAGAGEEILPIYQRHIGTDILPKVVKNIREYLESLGGEIRFNTEVEDIEIEDNEVLGVKLT-----KGEEIEADYVVL 224 (486)
T ss_pred HHHhCCCceeeeccccccCccchHHHHHHHHHHHHhcCcEEEeeeEEEEEEecCCceEEEEcc-----CCcEEecCEEEE
Confidence 34445544443 2345555556678889999999999999999999999988776543 4443 678999999999
Q ss_pred eecCCCCCC
Q 010573 311 SAGRTPFTA 319 (507)
Q Consensus 311 a~G~~p~~~ 319 (507)
|+|+.....
T Consensus 225 A~Grsg~dw 233 (486)
T COG2509 225 APGRSGRDW 233 (486)
T ss_pred ccCcchHHH
Confidence 999887654
No 278
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=98.13 E-value=4.8e-05 Score=76.56 Aligned_cols=99 Identities=20% Similarity=0.301 Sum_probs=71.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
-..+++|||||+.|+..|..++++|.+|+|||+.+.+- |. .
T Consensus 172 lP~~lvIiGgG~IGlE~a~~~~~LG~~VTiie~~~~iL---------p~----~-------------------------- 212 (454)
T COG1249 172 LPKSLVIVGGGYIGLEFASVFAALGSKVTVVERGDRIL---------PG----E-------------------------- 212 (454)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCC---------Cc----C--------------------------
Confidence 34679999999999999999999999999999965431 10 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
-+.+.+.+.+.+++.+++++.+. +..+. .+.+.+.++++....+.+|++++|+|-+|.
T Consensus 213 ----------D~ei~~~~~~~l~~~gv~i~~~~~v~~~~~~~~~v~v~~~~g~~~~~~ad~vLvAiGR~Pn 273 (454)
T COG1249 213 ----------DPEISKELTKQLEKGGVKILLNTKVTAVEKKDDGVLVTLEDGEGGTIEADAVLVAIGRKPN 273 (454)
T ss_pred ----------CHHHHHHHHHHHHhCCeEEEccceEEEEEecCCeEEEEEecCCCCEEEeeEEEEccCCccC
Confidence 01223334556666778888774 33332 233777777774447899999999999986
No 279
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=98.12 E-value=1.6e-05 Score=80.70 Aligned_cols=106 Identities=20% Similarity=0.296 Sum_probs=76.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--CCC--------C-HHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--PSM--------D-GEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~--------d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
.++++|||||+.|+.+|..|.+.+.+|+++++.+... +.+ + .++...+.+.++..+++++ ..+|++|+
T Consensus 10 ~~~vVIvGgG~aGl~~a~~L~~~~~~ItlI~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~i-~~~V~~Id 88 (424)
T PTZ00318 10 KPNVVVLGTGWAGAYFVRNLDPKKYNITVISPRNHMLFTPLLPQTTTGTLEFRSICEPVRPALAKLPNRYL-RAVVYDVD 88 (424)
T ss_pred CCeEEEECCCHHHHHHHHHhCcCCCeEEEEcCCCCcchhhhHHHhcccCCChHHhHHHHHHHhccCCeEEE-EEEEEEEE
Confidence 5789999999999999999977678999999877641 111 1 2233345566667788876 46899998
Q ss_pred EcCCeEEEEEeecC---CCceEEEEcCEEEEeecCCCCCCC
Q 010573 283 LSGDGVKLTLEPAA---GGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 283 ~~~~~v~v~~~~~~---~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.+++.+.+...... +.++.++++|.+|+|+|.+|+...
T Consensus 89 ~~~~~v~~~~~~~~~~~~~~g~~i~yD~LViAtGs~~~~~~ 129 (424)
T PTZ00318 89 FEEKRVKCGVVSKSNNANVNTFSVPYDKLVVAHGARPNTFN 129 (424)
T ss_pred cCCCEEEEecccccccccCCceEecCCEEEECCCcccCCCC
Confidence 77777666332110 124568999999999999987543
No 280
>PRK08294 phenol 2-monooxygenase; Provisional
Probab=98.12 E-value=3e-05 Score=82.32 Aligned_cols=38 Identities=29% Similarity=0.580 Sum_probs=34.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCCC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGA 77 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~ 77 (507)
|...+||+||||||+|+++|..|++. |.+|+|||+.+.
T Consensus 29 ~~~~~dVlIVGAGPaGL~lA~~Lar~~Gi~v~IiE~~~~ 67 (634)
T PRK08294 29 LPDEVDVLIVGCGPAGLTLAAQLSAFPDITTRIVERKPG 67 (634)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHhcCCCCcEEEEEcCCC
Confidence 45578999999999999999999995 999999999753
No 281
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=3.6e-06 Score=77.72 Aligned_cols=43 Identities=37% Similarity=0.552 Sum_probs=40.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV 85 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 85 (507)
++|++|||+|.+|+..|..|+++|++|.||||++.+||.|-..
T Consensus 1 ~fd~lIVGaGlsG~V~A~~a~~~gk~VLIvekR~HIGGNaYde 43 (374)
T COG0562 1 MFDYLIVGAGLSGAVIAEVAAQLGKRVLIVEKRNHIGGNAYDE 43 (374)
T ss_pred CCcEEEECCchhHHHHHHHHHHcCCEEEEEeccccCCCccccc
Confidence 4799999999999999999999999999999999999998643
No 282
>PRK08244 hypothetical protein; Provisional
Probab=98.11 E-value=4.1e-05 Score=79.39 Aligned_cols=102 Identities=24% Similarity=0.398 Sum_probs=78.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-----CC-----------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MD----------------------------------- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----~d----------------------------------- 254 (507)
..|+|||+|+.|+-+|..|++.|.+|+++++.+...+. +.
T Consensus 3 ~dVlIVGaGpaGl~lA~~L~~~G~~v~viEr~~~~~~~~ra~~l~~~~~e~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 82 (493)
T PRK08244 3 YEVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLERFLEKGRKLPSGHFAGLDTRL 82 (493)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCCcceeEecHHHHHHHHhcCcHHHHHhhcccccceEEecccccC
Confidence 36999999999999999999999999999987543100 00
Q ss_pred -----------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 -----------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 -----------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+.+.+.+.+++.|++++.++++++++.+++++.+++.+. ++ .+++.+|.||.|.|.++.
T Consensus 83 ~~~~~~~~~~~~~~i~q~~le~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~-~g-~~~i~a~~vVgADG~~S~ 160 (493)
T PRK08244 83 DFSALDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGP-DG-LRTLTSSYVVGADGAGSI 160 (493)
T ss_pred CcccCCCCCCcEEEecHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEcCCeEEEEEEeC-Cc-cEEEEeCEEEECCCCChH
Confidence 12345556666778999999999999988888888877532 12 257999999999998774
Q ss_pred C
Q 010573 318 T 318 (507)
Q Consensus 318 ~ 318 (507)
.
T Consensus 161 v 161 (493)
T PRK08244 161 V 161 (493)
T ss_pred H
Confidence 4
No 283
>PTZ00367 squalene epoxidase; Provisional
Probab=98.11 E-value=7e-06 Score=85.37 Aligned_cols=35 Identities=29% Similarity=0.407 Sum_probs=32.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
..+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 32 ~~~dViIVGaGiaGlalA~aLar~G~~V~VlEr~~ 66 (567)
T PTZ00367 32 YDYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDL 66 (567)
T ss_pred cCccEEEECCCHHHHHHHHHHHhcCCEEEEEcccc
Confidence 46899999999999999999999999999999964
No 284
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=98.11 E-value=3.3e-05 Score=77.21 Aligned_cols=97 Identities=18% Similarity=0.248 Sum_probs=68.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... ..|
T Consensus 141 ~~~vvViGgG~~g~e~A~~L~~~g~~Vtlv~~~~~~l~~-----~~~--------------------------------- 182 (377)
T PRK04965 141 AQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLAS-----LMP--------------------------------- 182 (377)
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCcccch-----hCC---------------------------------
Confidence 358999999999999999999999999999985433110 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+++++.+ .+..+. ...+.+.+.+| .++.+|.+|+|+|..|.
T Consensus 183 ----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vI~a~G~~p~ 240 (377)
T PRK04965 183 ----------PEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIRATLDSG--RSIEVDAVIAAAGLRPN 240 (377)
T ss_pred ----------HHHHHHHHHHHHhCCCEEEECCeEEEEEccCCEEEEEEcCC--cEEECCEEEECcCCCcc
Confidence 001122344566778998876 344443 33455666777 68999999999999884
No 285
>PLN02576 protoporphyrinogen oxidase
Probab=98.09 E-value=4e-06 Score=87.12 Aligned_cols=44 Identities=32% Similarity=0.516 Sum_probs=40.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCCCCCceecc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~ 84 (507)
..++||+|||||++||+||++|++. |++|+|+|+++++||.+..
T Consensus 10 ~~~~~v~IIGaGisGL~aA~~L~~~~g~~v~vlEa~~rvGGr~~t 54 (496)
T PLN02576 10 ASSKDVAVVGAGVSGLAAAYALASKHGVNVLVTEARDRVGGNITS 54 (496)
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHhcCCCEEEEecCCCCCCceeE
Confidence 3457999999999999999999999 9999999999999998754
No 286
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ. CobZ is essential for cobalamin biosynthesis (by knockout of the R. capsulatus gene ) and is complemented by the characterized precorrin 3B synthase CobG. The enzyme has been shown to contain flavin, heme and Fe-S cluster cofactors and is believed to require dioxygen as a substrate. This model identifies the N-terminal portion of the R. capsulatus gene which, in other species exists as a separate protein. The C-terminal portion is homologous to the 2-component signal transduction system protein CitB (TIGR02484).
Probab=98.09 E-value=2.1e-05 Score=80.09 Aligned_cols=35 Identities=40% Similarity=0.591 Sum_probs=31.1
Q ss_pred EECCChHHHHHHHHHHHCCCcEEEEecCCC--CCcee
Q 010573 48 VIGGGPGGYVAAIKAAQLGLKTTCIEKRGA--LGGTC 82 (507)
Q Consensus 48 IIG~G~aGl~aA~~l~~~g~~V~lie~~~~--~GG~~ 82 (507)
|||+|.||++||.++++.|.+|+|+||.+. .||..
T Consensus 1 VVG~G~AGl~AA~~Aa~~Ga~V~vlEK~~~~~~Gg~s 37 (432)
T TIGR02485 1 VIGGGLAGLCAAIEARRAGASVLLLEAAPRARRGGNA 37 (432)
T ss_pred CCcccHHHHHHHHHHHhCCCcEEEEeCCCCCcCCcCc
Confidence 799999999999999999999999999764 46554
No 287
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=98.09 E-value=1.6e-05 Score=79.10 Aligned_cols=97 Identities=25% Similarity=0.384 Sum_probs=71.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhc---CCeeEEEcccCcc--CCCCC---------HHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 216 KLVVIGAGYIGLEMGSVWARL---GSEVTVVEFAADI--VPSMD---------GEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~--~~~~d---------~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+|+|||||+.|+.+|..+.+. +.+|+++++.+.. .+.++ .++...+.+.+++.|++++.+ +|+.+
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 79 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTPYSGMLPGMIAGHYSLDEIRIDLRRLARQAGARFVIA-EATGI 79 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCCCCcccchhhHHHheeCCHHHhcccHHHHHHhcCCEEEEE-EEEEE
Confidence 589999999999999998643 5789999987753 11111 223334566677889999864 78888
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.+++. +.+. +++++.+|.+|+|+|.+|+...
T Consensus 80 d~~~~~--V~~~-----~g~~~~yD~LviAtG~~~~~~~ 111 (364)
T TIGR03169 80 DPDRRK--VLLA-----NRPPLSYDVLSLDVGSTTPLSG 111 (364)
T ss_pred ecccCE--EEEC-----CCCcccccEEEEccCCCCCCCC
Confidence 766553 4443 4567999999999999997654
No 288
>PRK11883 protoporphyrinogen oxidase; Reviewed
Probab=98.08 E-value=3.8e-06 Score=86.17 Aligned_cols=41 Identities=34% Similarity=0.525 Sum_probs=37.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceecc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~ 84 (507)
++|+|||||+|||+||+.|++.| ++|+|+|+++++||.+..
T Consensus 1 ~~v~IVGaGiaGL~aA~~L~~~G~~~~V~vlEa~~~~GGr~~t 43 (451)
T PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGPDADITLLEASDRLGGKIQT 43 (451)
T ss_pred CeEEEECCCHHHHHHHHHHHHhCCCCCEEEEEcCCCCcceEEE
Confidence 37999999999999999999987 899999999999998653
No 289
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end.
Probab=98.07 E-value=4.3e-06 Score=86.04 Aligned_cols=41 Identities=32% Similarity=0.476 Sum_probs=38.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC----CCcEEEEecCCCCCceecc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL----GLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~~~GG~~~~ 84 (507)
+||+|||||++||+||+.|++. |++|+|+|+++++||.+..
T Consensus 3 ~~v~VIGaGiaGL~aA~~L~~~~~~~g~~v~vlE~~~r~GG~~~t 47 (462)
T TIGR00562 3 KHVVIIGGGISGLCAAYYLEKEIPELPVELTLVEASDRVGGKIQT 47 (462)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCCCCCcEEEEEcCCcCcceEEE
Confidence 6899999999999999999998 9999999999999998764
No 290
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=98.06 E-value=4.2e-05 Score=78.66 Aligned_cols=98 Identities=24% Similarity=0.320 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+.. . .+
T Consensus 172 ~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~---------~----------------------------~~-- 212 (462)
T PRK06416 172 PKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILP---------G----------------------------ED-- 212 (462)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCcCC---------c----------------------------CC--
Confidence 35899999999999999999999999999998654311 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccC-CceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIE-GGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~-g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..++ .+.+.+.+.+ ++...+.+|.+|+|+|.+|.
T Consensus 213 ----------~~~~~~l~~~l~~~gV~i~~~~~V~~i~~~~~~v~v~~~~gg~~~~i~~D~vi~a~G~~p~ 273 (462)
T PRK06416 213 ----------KEISKLAERALKKRGIKIKTGAKAKKVEQTDDGVTVTLEDGGKEETLEADYVLVAVGRRPN 273 (462)
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEeCCEEEEEEEeCCeeEEEEeCEEEEeeCCccC
Confidence 011122345566778999887 344443 2345555443 33367999999999999985
No 291
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=98.06 E-value=5e-05 Score=78.11 Aligned_cols=96 Identities=22% Similarity=0.267 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..+++.|.+|+|+++.+.+... ++
T Consensus 175 ~~~v~IiGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~-------------------------------------~d-- 215 (461)
T PRK05249 175 PRSLIIYGAGVIGCEYASIFAALGVKVTLINTRDRLLSF-------------------------------------LD-- 215 (461)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCCc-------------------------------------CC--
Confidence 468999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+++++.+ .+..+. .+.+.+.+.+| .++.+|.+++|+|.+|.
T Consensus 216 ----------~~~~~~l~~~l~~~gI~v~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~ 273 (461)
T PRK05249 216 ----------DEISDALSYHLRDSGVTIRHNEEVEKVEGGDDGVIVHLKSG--KKIKADCLLYANGRTGN 273 (461)
T ss_pred ----------HHHHHHHHHHHHHcCCEEEECCEEEEEEEeCCeEEEEECCC--CEEEeCEEEEeecCCcc
Confidence 001122334566778998877 344443 34555666666 57999999999999985
No 292
>PLN02268 probable polyamine oxidase
Probab=98.05 E-value=5e-06 Score=84.84 Aligned_cols=40 Identities=38% Similarity=0.580 Sum_probs=37.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
+|+|||||.|||+||+.|.+.|++|+|+|+++++||.+..
T Consensus 2 ~VvVIGaGisGL~aA~~L~~~g~~v~vlEa~~r~GGri~t 41 (435)
T PLN02268 2 SVIVIGGGIAGIAAARALHDASFKVTLLESRDRIGGRVHT 41 (435)
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCceeee
Confidence 7999999999999999999999999999999999998753
No 293
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=98.05 E-value=5e-06 Score=82.54 Aligned_cols=43 Identities=33% Similarity=0.438 Sum_probs=39.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG 86 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~ 86 (507)
++|+|+|||.|||+||.+|+++|++|+|+|.++.+||.|..+.
T Consensus 1 ~rVai~GaG~AgL~~a~~La~~g~~vt~~ea~~~~GGk~~s~~ 43 (485)
T COG3349 1 MRVAIAGAGLAGLAAAYELADAGYDVTLYEARDRLGGKVASWR 43 (485)
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCceEEEeccCccCceeeeee
Confidence 4799999999999999999999999999999999999886543
No 294
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=98.05 E-value=2.2e-05 Score=77.62 Aligned_cols=105 Identities=27% Similarity=0.268 Sum_probs=71.8
Q ss_pred cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC---------CCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 211 NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---------SMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 211 ~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---------~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
...+++++|||+|+.|+++|..+++.|.+|+++++.+.+.. ..+.+......+.+.+.|++++.++.+..+
T Consensus 15 ~~~~~~VvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~v~~~ 94 (352)
T PRK12770 15 PPTGKKVAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFGIPEFRIPIERVREGVKELEEAGVVFHTRTKVCCG 94 (352)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeeecCcccccCHHHHHHHHHHHHhCCeEEecCcEEeec
Confidence 44588999999999999999999999999999998876532 123333444556667779999999888655
Q ss_pred EE----cCCeEEEEEeecCCCceEEEEcCEEEEeecCC-CCC
Q 010573 282 DL----SGDGVKLTLEPAAGGEKTILEADVVLVSAGRT-PFT 318 (507)
Q Consensus 282 ~~----~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~ 318 (507)
.. +.+........ .++..+.+|.||+|+|.. |..
T Consensus 95 ~~~~~~~~~~~~~~~~~---~~~~~~~~d~lviAtGs~~~~~ 133 (352)
T PRK12770 95 EPLHEEEGDEFVERIVS---LEELVKKYDAVLIATGTWKSRK 133 (352)
T ss_pred cccccccccccccccCC---HHHHHhhCCEEEEEeCCCCCCc
Confidence 32 11111111100 012247899999999984 543
No 295
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=98.05 E-value=4.9e-05 Score=78.19 Aligned_cols=98 Identities=22% Similarity=0.315 Sum_probs=67.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..|++.|.+|+|+++.+.+. |. .+
T Consensus 172 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l---------~~----------------------------~d-- 212 (466)
T PRK07818 172 PKSIVIAGAGAIGMEFAYVLKNYGVDVTIVEFLDRAL---------PN----------------------------ED-- 212 (466)
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcC---------Cc----------------------------cC--
Confidence 3589999999999999999999999999999854321 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecC--CEEEEEcc--CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP--SEVSVDTI--EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~--~~~~v~~~--~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+.. ..+.+.+. +|+..++.+|.|++|+|.+|.
T Consensus 213 ----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vi~a~G~~pn 274 (466)
T PRK07818 213 ----------AEVSKEIAKQYKKLGVKILTGTKVESIDDNGSKVTVTVSKKDGKAQELEADKVLQAIGFAPR 274 (466)
T ss_pred ----------HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCeEEEEEEecCCCeEEEEeCEEEECcCcccC
Confidence 0011223456677899998873 444432 23334333 554467999999999999985
No 296
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD. Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.
Probab=98.04 E-value=5e-06 Score=86.20 Aligned_cols=42 Identities=36% Similarity=0.493 Sum_probs=38.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV 85 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 85 (507)
.||+|||||++||+||..|++.|++|+|+|+++.+||.+...
T Consensus 2 ~dvvIIGaG~~GL~aa~~La~~G~~v~vlE~~~~~GG~~~t~ 43 (492)
T TIGR02733 2 TSVVVIGAGIAGLTAAALLAKRGYRVTLLEQHAQPGGCAGTF 43 (492)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccee
Confidence 589999999999999999999999999999999999977543
No 297
>PRK07233 hypothetical protein; Provisional
Probab=98.04 E-value=5e-06 Score=84.83 Aligned_cols=56 Identities=20% Similarity=0.215 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
..+.+.+.+.+++.|++++++++|++|+.+++++.+... ++..+.+|.||+|++..
T Consensus 198 ~~l~~~l~~~l~~~g~~v~~~~~V~~i~~~~~~~~~~~~-----~~~~~~ad~vI~a~p~~ 253 (434)
T PRK07233 198 ATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVEV-----DGEEEDFDAVISTAPPP 253 (434)
T ss_pred HHHHHHHHHHHHhcCceEEeCCCeeEEEEcCCceEEEEe-----CCceEECCEEEECCCHH
Confidence 457777888888899999999999999877776654432 34579999999999853
No 298
>TIGR02730 carot_isom carotene isomerase. Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization.
Probab=98.04 E-value=5.3e-06 Score=85.95 Aligned_cols=41 Identities=37% Similarity=0.485 Sum_probs=39.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
+|++|||||.+|+++|..|+++|++|+|+||++.+||.|..
T Consensus 1 ~dvvViGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (493)
T TIGR02730 1 YDAIVIGSGIGGLVTATQLAVKGAKVLVLERYLIPGGSAGY 41 (493)
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCCceeE
Confidence 69999999999999999999999999999999999998865
No 299
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=98.03 E-value=2.1e-05 Score=86.63 Aligned_cols=93 Identities=24% Similarity=0.242 Sum_probs=72.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..|++.|.+||++++.+.+. | .+++++.+...+.+++.||++++++.+-.
T Consensus 305 ~gkkVaVIGsGPAGLsaA~~Lar~G~~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~--- 381 (944)
T PRK12779 305 VKPPIAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGK--- 381 (944)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEecc---
Confidence 47999999999999999999999999999999887542 2 34667777777888999999998875521
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCC-CCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRT-PFT 318 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~ 318 (507)
.++++ +.....+|.|++|+|.. |..
T Consensus 382 -----dit~~-----~l~~~~yDAV~LAtGA~~pr~ 407 (944)
T PRK12779 382 -----TATLE-----DLKAAGFWKIFVGTGAGLPTF 407 (944)
T ss_pred -----EEeHH-----HhccccCCEEEEeCCCCCCCc
Confidence 23332 22345799999999984 543
No 300
>PRK10262 thioredoxin reductase; Provisional
Probab=98.03 E-value=8.3e-05 Score=72.52 Aligned_cols=100 Identities=16% Similarity=0.253 Sum_probs=71.7
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC---cc--------CCC-----CCHHHHHHHHHHHHhcCcEEEcCc
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA---DI--------VPS-----MDGEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~---~~--------~~~-----~d~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
..++++|||+|+.|+.+|..+.+.|.++++++... .+ ++. ..+++.+.+.+.....+++++.+
T Consensus 5 ~~~~vvIIGgGpaGl~aA~~l~~~g~~~~~ie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (321)
T PRK10262 5 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFD- 83 (321)
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCeEEEEeecCCCceecCceECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEee-
Confidence 35789999999999999999999999998886422 11 011 12345666777777778887765
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.+..++..++.+.++.. ...+.+|.||+|+|..|+..
T Consensus 84 ~v~~v~~~~~~~~v~~~------~~~~~~d~vilAtG~~~~~~ 120 (321)
T PRK10262 84 HINKVDLQNRPFRLTGD------SGEYTCDALIIATGASARYL 120 (321)
T ss_pred EEEEEEecCCeEEEEec------CCEEEECEEEECCCCCCCCC
Confidence 56677666665555431 23689999999999998654
No 301
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=98.03 E-value=6.7e-06 Score=74.14 Aligned_cols=40 Identities=28% Similarity=0.469 Sum_probs=36.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
.+|+|||+|+||++||..|+..|.+|+|+||..-+||...
T Consensus 2 ~siaIVGaGiAGl~aA~~L~~aG~~vtV~eKg~GvGGRlA 41 (331)
T COG3380 2 PSIAIVGAGIAGLAAAYALREAGREVTVFEKGRGVGGRLA 41 (331)
T ss_pred CcEEEEccchHHHHHHHHHHhcCcEEEEEEcCCCcccchh
Confidence 3699999999999999999999999999999888887653
No 302
>PRK14989 nitrite reductase subunit NirD; Provisional
Probab=98.02 E-value=2.7e-05 Score=84.91 Aligned_cols=99 Identities=15% Similarity=0.237 Sum_probs=72.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc----CCeeEEEcccCccC--C-CCC--------HHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL----GSEVTVVEFAADIV--P-SMD--------GEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~~--~-~~d--------~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
++++|||+|+.|+.+|..|.+. +.+||++++.+++. + .+. .++.....+.+++.||+++.++.++
T Consensus 4 ~kIVIVG~G~AG~~aa~~L~~~~~~~~~~Itvi~~e~~~~Y~r~~L~~~~~~~~~~~l~~~~~~~~~~~gI~~~~g~~V~ 83 (847)
T PRK14989 4 VRLAIIGNGMVGHRFIEDLLDKADAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAI 83 (847)
T ss_pred CcEEEECCCHHHHHHHHHHHhhCCCCCCeEEEEECCCCCcccCCcchHhHcCCCHHHccCCCHHHHHhCCCEEEcCCEEE
Confidence 5899999999999999999765 46899998877641 1 111 1222223456778899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.+..+.. .|.+. +++++.+|.+|+|||.+|....
T Consensus 84 ~Id~~~~--~V~~~-----~G~~i~yD~LVIATGs~p~~p~ 117 (847)
T PRK14989 84 TINRQEK--VIHSS-----AGRTVFYDKLIMATGSYPWIPP 117 (847)
T ss_pred EEeCCCc--EEEEC-----CCcEEECCEEEECCCCCcCCCC
Confidence 9865433 33332 4568999999999999987654
No 303
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=98.02 E-value=2.5e-05 Score=76.63 Aligned_cols=100 Identities=24% Similarity=0.363 Sum_probs=76.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCccC-C-C---------CCHHHHHHHHHHHHhcC-cEEEcCceEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIV-P-S---------MDGEIRKQFQRSLEKQK-MKFMLKTKVV 279 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~-~-~---------~d~~~~~~~~~~l~~~G-v~i~~~~~v~ 279 (507)
.+++||+|||+-|+.++..|.+.- .+||++++++..+ . . -+.++...+.+.+++.+ ++++ ..+|+
T Consensus 3 ~~~iVIlGgGfgGl~~a~~l~~~~~~~~itLVd~~~~hl~~plL~eva~g~l~~~~i~~p~~~~~~~~~~v~~~-~~~V~ 81 (405)
T COG1252 3 KKRIVILGGGFGGLSAAKRLARKLPDVEITLVDRRDYHLFTPLLYEVATGTLSESEIAIPLRALLRKSGNVQFV-QGEVT 81 (405)
T ss_pred CceEEEECCcHHHHHHHHHhhhcCCCCcEEEEeCCCccccchhhhhhhcCCCChhheeccHHHHhcccCceEEE-EEEEE
Confidence 578999999999999999999874 8899999987652 1 1 12345556778888565 8887 46788
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGL 321 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l 321 (507)
+|+.++..+.+. ++..+++|.+|+++|.++++...
T Consensus 82 ~ID~~~k~V~~~-------~~~~i~YD~LVvalGs~~~~fgi 116 (405)
T COG1252 82 DIDRDAKKVTLA-------DLGEISYDYLVVALGSETNYFGI 116 (405)
T ss_pred EEcccCCEEEeC-------CCccccccEEEEecCCcCCcCCC
Confidence 897666555443 45689999999999999988653
No 304
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=98.01 E-value=4e-05 Score=77.61 Aligned_cols=97 Identities=33% Similarity=0.438 Sum_probs=70.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..|++.|++|+++|+.+++++....
T Consensus 136 ~~~v~vvG~G~~gle~A~~~~~~G~~v~l~e~~~~~~~~~~~-------------------------------------- 177 (415)
T COG0446 136 PKDVVVVGAGPIGLEAAEAAAKRGKKVTLIEAADRLGGQLLD-------------------------------------- 177 (415)
T ss_pred cCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcccccchhhhh--------------------------------------
Confidence 368999999999999999999999999999998877663110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCE--EE---EEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSE--VS---VDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~--~~---v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. ...++... .. +...++ ..+.+|.+++++|.+|+
T Consensus 178 ----------~~~~~~~~~~l~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~g~~p~ 238 (415)
T COG0446 178 ----------PEVAEELAELLEKYGVELLLGTKVVGVEGKGNTLVVERVVGIDG--EEIKADLVIIGPGERPN 238 (415)
T ss_pred ----------HHHHHHHHHHHHHCCcEEEeCCceEEEEcccCcceeeEEEEeCC--cEEEeeEEEEeeccccc
Confidence 1122234566777888887774 34444332 11 344455 78999999999999995
No 305
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria.
Probab=98.01 E-value=7e-05 Score=76.55 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=67.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..+++.|.+|+++++.+.+.. . ++
T Consensus 166 ~~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~~~l~---------~----------------------------~d-- 206 (446)
T TIGR01424 166 PKSILILGGGYIAVEFAGIWRGLGVQVTLIYRGELILR---------G----------------------------FD-- 206 (446)
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEeCCCCCc---------c----------------------------cC--
Confidence 35799999999999999999999999999998543210 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+++++.+. +..++ .+.+.+.+.++ .++.+|.+|+|+|..|.
T Consensus 207 ----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~viva~G~~pn 264 (446)
T TIGR01424 207 ----------DDMRALLARNMEGRGIRIHPQTSLTSITKTDDGLKVTLSHG--EEIVADVVLFATGRSPN 264 (446)
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCeEEEEEcCC--cEeecCEEEEeeCCCcC
Confidence 0011122345667899998773 44443 34455666566 67999999999999885
No 306
>PRK05868 hypothetical protein; Validated
Probab=98.01 E-value=6.8e-05 Score=74.67 Aligned_cols=100 Identities=24% Similarity=0.357 Sum_probs=74.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC---CC--C-------------HHH-------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---SM--D-------------GEI------------------- 257 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~--d-------------~~~------------------- 257 (507)
++|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .. . +++
T Consensus 2 ~~V~IvGgG~aGl~~A~~L~~~G~~v~viE~~~~~~~~g~~i~~~~~a~~~L~~lGl~~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
T PRK05868 2 KTVVVSGASVAGTAAAYWLGRHGYSVTMVERHPGLRPGGQAIDVRGPALDVLERMGLLAAAQEHKTRIRGASFVDRDGNE 81 (372)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCceeeeeCchHHHHHHhcCCHHHHHhhccCccceEEEeCCCCE
Confidence 4799999999999999999999999999998765421 00 0 000
Q ss_pred ----------------------HHHHHHHHH---hcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEee
Q 010573 258 ----------------------RKQFQRSLE---KQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSA 312 (507)
Q Consensus 258 ----------------------~~~~~~~l~---~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~ 312 (507)
...+.+.|. ..|++++++++++.++.+++++.++++ +++++.+|+||-|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~R~~L~~~l~~~~~~~v~i~~~~~v~~i~~~~~~v~v~~~-----dg~~~~adlvIgAD 156 (372)
T PRK05868 82 LFRDTESTPTGGPVNSPDIELLRDDLVELLYGATQPSVEYLFDDSISTLQDDGDSVRVTFE-----RAAAREFDLVIGAD 156 (372)
T ss_pred EeecccccccCCCCCCceEEEEHHHHHHHHHHhccCCcEEEeCCEEEEEEecCCeEEEEEC-----CCCeEEeCEEEECC
Confidence 112223322 358999999999999877788888876 45679999999999
Q ss_pred cCCCCCC
Q 010573 313 GRTPFTA 319 (507)
Q Consensus 313 G~~p~~~ 319 (507)
|.+...-
T Consensus 157 G~~S~vR 163 (372)
T PRK05868 157 GLHSNVR 163 (372)
T ss_pred CCCchHH
Confidence 9877553
No 307
>PRK06370 mercuric reductase; Validated
Probab=98.00 E-value=7.3e-05 Score=76.87 Aligned_cols=99 Identities=19% Similarity=0.304 Sum_probs=67.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..|++.|.+|+|+++.+.+... ..
T Consensus 171 ~~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~~~l~~-------------~~-------------------------- 211 (463)
T PRK06370 171 PEHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGPRLLPR-------------ED-------------------------- 211 (463)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCCCcc-------------cC--------------------------
Confidence 368999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--CEEEEEcc-CCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--SEVSVDTI-EGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~~~~v~~~-~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+++++.+ .+..++. ....+... +++...+.+|.||+|+|.+|..
T Consensus 212 ----------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~~v~~~~~~~~~~i~~D~Vi~A~G~~pn~ 273 (463)
T PRK06370 212 ----------EDVAAAVREILEREGIDVRLNAECIRVERDGDGIAVGLDCNGGAPEITGSHILVAVGRVPNT 273 (463)
T ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCEEEEEEEeCCCceEEEeCEEEECcCCCcCC
Confidence 001112234566789999877 4544432 23333332 1223679999999999999863
No 308
>TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
Probab=98.00 E-value=6.6e-05 Score=77.24 Aligned_cols=99 Identities=22% Similarity=0.329 Sum_probs=67.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..|++.|.+|+|+++.+.+... .+
T Consensus 166 ~~~vvIIGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~-------------------------------------~d-- 206 (463)
T TIGR02053 166 PESLAVIGGGAIGVELAQAFARLGSEVTILQRSDRLLPR-------------------------------------EE-- 206 (463)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcCCCc-------------------------------------cC--
Confidence 368999999999999999999999999999985433110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEcc-CCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTI-EGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~-~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+|+++.+. +..+. .+...+.+. +++..++.+|.+|+|+|.+|..
T Consensus 207 ----------~~~~~~l~~~l~~~gV~i~~~~~V~~i~~~~~~~~v~~~~~~~~~~i~~D~ViiA~G~~p~~ 268 (463)
T TIGR02053 207 ----------PEISAAVEEALAEEGIEVVTSAQVKAVSVRGGGKIITVEKPGGQGEVEADELLVATGRRPNT 268 (463)
T ss_pred ----------HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCEEEEEEEeCCCceEEEeCEEEEeECCCcCC
Confidence 0011123445667789988874 44443 233444432 2224689999999999999853
No 309
>PLN02463 lycopene beta cyclase
Probab=98.00 E-value=7.7e-05 Score=75.56 Aligned_cols=97 Identities=19% Similarity=0.267 Sum_probs=74.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCC-C---------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPS-M--------------------------------------- 253 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~-~--------------------------------------- 253 (507)
-.|+|||+|+.|+-+|..+++.|.+|.++++.+.. .+. .
T Consensus 29 ~DVvIVGaGpAGLalA~~La~~Gl~V~liE~~~~~~~p~~~g~w~~~l~~lgl~~~l~~~w~~~~v~~~~~~~~~~~~~y 108 (447)
T PLN02463 29 VDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPSPLSIWPNNYGVWVDEFEALGLLDCLDTTWPGAVVYIDDGKKKDLDRPY 108 (447)
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEeccCccchhccccchHHHHHHHCCcHHHHHhhCCCcEEEEeCCCCccccCcc
Confidence 36999999999999999999999999999876532 110 0
Q ss_pred ---C-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 254 ---D-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 254 ---d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+ .++.+.+.+.+.+.|++++ ...|++++.+++++.|++. ++.++.+|.||.|+|..+.
T Consensus 109 ~~V~R~~L~~~Ll~~~~~~GV~~~-~~~V~~I~~~~~~~~V~~~-----dG~~i~A~lVI~AdG~~s~ 170 (447)
T PLN02463 109 GRVNRKKLKSKMLERCIANGVQFH-QAKVKKVVHEESKSLVVCD-----DGVKIQASLVLDATGFSRC 170 (447)
T ss_pred eeEEHHHHHHHHHHHHhhcCCEEE-eeEEEEEEEcCCeEEEEEC-----CCCEEEcCEEEECcCCCcC
Confidence 0 1233445555667799987 5789999887777777765 4568999999999998764
No 310
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=97.97 E-value=8.7e-05 Score=76.23 Aligned_cols=96 Identities=23% Similarity=0.354 Sum_probs=68.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
.+++|||+|+.|+..|..|++.|.+|++|++.+.+.... .
T Consensus 178 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtli~~~~~~l~~~-------------d--------------------------- 217 (466)
T PRK07845 178 EHLIVVGSGVTGAEFASAYTELGVKVTLVSSRDRVLPGE-------------D--------------------------- 217 (466)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcCCCCC-------------C---------------------------
Confidence 579999999999999999999999999999854431100 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+...+++.+|+++.+. +..+ +.+.+.+.+.+| .++.+|.+++|+|.+|..
T Consensus 218 ---------~~~~~~l~~~L~~~gV~i~~~~~v~~v~~~~~~~~v~~~~g--~~l~~D~vl~a~G~~pn~ 276 (466)
T PRK07845 218 ---------ADAAEVLEEVFARRGMTVLKRSRAESVERTGDGVVVTLTDG--RTVEGSHALMAVGSVPNT 276 (466)
T ss_pred ---------HHHHHHHHHHHHHCCcEEEcCCEEEEEEEeCCEEEEEECCC--cEEEecEEEEeecCCcCC
Confidence 0011223456677899988773 4444 344566666666 679999999999999863
No 311
>TIGR02734 crtI_fam phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger Pfam family pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis.
Probab=97.97 E-value=6.6e-06 Score=85.59 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+.+.+.+.+++.|+++++++.|++|..+++++ .|++. +++++.+|.||++.+...
T Consensus 219 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~V~~~-----~g~~~~ad~VI~a~~~~~ 276 (502)
T TIGR02734 219 GALVAAMAKLAEDLGGELRLNAEVIRIETEGGRATAVHLA-----DGERLDADAVVSNADLHH 276 (502)
T ss_pred HHHHHHHHHHHHHCCCEEEECCeEEEEEeeCCEEEEEEEC-----CCCEEECCEEEECCcHHH
Confidence 4677888888999999999999999998766653 45543 456799999999988643
No 312
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria. Though its precise molecular function of these proteins is not known, it is involved in the 5-carboxymethylaminomethyl modification of the wobble uridine base in some tRNAs [, ]. Sequence variations in the human mitochondrial protein may influence the severity of aminoglycoside-induced deafness []. This entry is found in GidA and related proteins, such as the methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase enzyme TrmFO.; GO: 0050660 flavin adenine dinucleotide binding, 0008033 tRNA processing; PDB: 3CES_C 3CP2_A 3G05_A 2CUL_A 3CP8_A 2ZXI_B 2ZXH_A 3G5S_A 3G5R_A 3G5Q_A.
Probab=97.97 E-value=9.8e-05 Score=72.22 Aligned_cols=93 Identities=23% Similarity=0.424 Sum_probs=66.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEE-cccCccC--CC----------------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVV-EFAADIV--PS---------------------------------------- 252 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv-~~~~~~~--~~---------------------------------------- 252 (507)
.|+|||||..|+|.|..+++.|.+|.++ +..+.+. +.
T Consensus 1 DViVVGgG~AG~eAA~aaAr~G~~V~Lit~~~d~i~~~~Cnpsigg~~kg~L~~Eidalgg~m~~~aD~~~i~~~~lN~s 80 (392)
T PF01134_consen 1 DVIVVGGGHAGCEAALAAARMGAKVLLITHNTDTIGEMSCNPSIGGIAKGHLVREIDALGGLMGRAADETGIHFRMLNRS 80 (392)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT--EEEEES-GGGTT--SSSSEEESTTHHHHHHHHHHTT-SHHHHHHHHEEEEEEESTT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeecccccccccchhhhccccccchhHHHhhhhhHHHHHHhHhhhhhhccccc
Confidence 4899999999999999999999999999 4444442 11
Q ss_pred -----------CC-HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 253 -----------MD-GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 253 -----------~d-~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
.| ....+.+++.+++ .+++++ ...|+++..+++.+. |.+. ++..+.+|.||+|||.
T Consensus 81 kGpav~a~r~qvDr~~y~~~~~~~l~~~~nl~i~-~~~V~~l~~e~~~v~GV~~~-----~g~~~~a~~vVlaTGt 150 (392)
T PF01134_consen 81 KGPAVHALRAQVDRDKYSRAMREKLESHPNLTII-QGEVTDLIVENGKVKGVVTK-----DGEEIEADAVVLATGT 150 (392)
T ss_dssp S-GGCTEEEEEE-HHHHHHHHHHHHHTSTTEEEE-ES-EEEEEECTTEEEEEEET-----TSEEEEECEEEE-TTT
T ss_pred CCCCccchHhhccHHHHHHHHHHHHhcCCCeEEE-EcccceEEecCCeEEEEEeC-----CCCEEecCEEEEeccc
Confidence 01 2344556666666 688886 678999987777766 5543 6789999999999998
No 313
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=97.97 E-value=4.3e-05 Score=83.34 Aligned_cols=91 Identities=29% Similarity=0.318 Sum_probs=68.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | .++.+....-.+.+++.||++++++.+ .+
T Consensus 538 tgKkVaIIGgGPAGLsAA~~Lar~G~~VtV~Ek~~~~GG~lr~~IP~~Rlp~evL~~die~l~~~GVe~~~gt~V-di-- 614 (1019)
T PRK09853 538 SRKKVAVIGAGPAGLAAAYFLARAGHPVTVFEREENAGGVVKNIIPQFRIPAELIQHDIEFVKAHGVKFEFGCSP-DL-- 614 (1019)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCeEEEEecccccCcceeeecccccccHHHHHHHHHHHHHcCCEEEeCcee-EE--
Confidence 46899999999999999999999999999999876542 2 234455555567778889999998876 22
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.++ +.....+|.||+|||.++..
T Consensus 615 -------~le-----~L~~~gYDaVILATGA~~~~ 637 (1019)
T PRK09853 615 -------TVE-----QLKNEGYDYVVVAIGADKNG 637 (1019)
T ss_pred -------Ehh-----hheeccCCEEEECcCCCCCC
Confidence 111 12345689999999998643
No 314
>PRK06116 glutathione reductase; Validated
Probab=97.96 E-value=7.3e-05 Score=76.59 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=68.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..|++.|.+|+++++.+.+... .+
T Consensus 167 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~~-- 207 (450)
T PRK06116 167 PKRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGDAPLRG-------------------------------------FD-- 207 (450)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCccc-------------------------------------cC--
Confidence 368999999999999999999999999999985432100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--C-EEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--S-EVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~-~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..++. + .+.+.+.+| .++.+|.+|+|+|.+|.
T Consensus 208 ----------~~~~~~l~~~L~~~GV~i~~~~~V~~i~~~~~g~~~v~~~~g--~~i~~D~Vv~a~G~~p~ 266 (450)
T PRK06116 208 ----------PDIRETLVEEMEKKGIRLHTNAVPKAVEKNADGSLTLTLEDG--ETLTVDCLIWAIGREPN 266 (450)
T ss_pred ----------HHHHHHHHHHHHHCCcEEECCCEEEEEEEcCCceEEEEEcCC--cEEEeCEEEEeeCCCcC
Confidence 001122344566788998877 3444432 2 256666666 67999999999999885
No 315
>PLN02568 polyamine oxidase
Probab=97.96 E-value=1e-05 Score=83.88 Aligned_cols=43 Identities=28% Similarity=0.414 Sum_probs=39.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-----CcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLG-----LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g-----~~V~lie~~~~~GG~~~~ 84 (507)
..+||+|||||++|++||..|++.| ++|+|+|+++.+||.+..
T Consensus 4 ~~~~v~iiGaG~aGl~aa~~L~~~g~~~~~~~v~v~E~~~~~GGr~~t 51 (539)
T PLN02568 4 KKPRIVIIGAGMAGLTAANKLYTSSAANDMFELTVVEGGDRIGGRINT 51 (539)
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcccccCCceEEEEeCCCCcCCeEEE
Confidence 3479999999999999999999887 899999999999998754
No 316
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=97.96 E-value=0.0001 Score=77.36 Aligned_cols=99 Identities=23% Similarity=0.372 Sum_probs=74.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-----------CCC----CCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-----------VPS----MDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-----------~~~----~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
..|+|||||+.|+.+|..+++.|.+|+++++.+.- .+. ..+++.+.+.+.+++.|++++ ++.++
T Consensus 5 yDVvIIGgGpAGL~AA~~lar~g~~V~liE~~~~GG~~~~~~~i~~~pg~~~~~~~~l~~~l~~~~~~~gv~~~-~~~V~ 83 (555)
T TIGR03143 5 YDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKDDFGGQITITSEVVNYPGILNTTGPELMQEMRQQAQDFGVKFL-QAEVL 83 (555)
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCceEEeccccccCCCCcCCCHHHHHHHHHHHHHHcCCEEe-ccEEE
Confidence 46999999999999999999999999999975421 011 124566777778888899986 67888
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.+..+++...+... + ..+.+|.+|+|+|.+|....
T Consensus 84 ~i~~~~~~~~V~~~-----~-g~~~a~~lVlATGa~p~~~~ 118 (555)
T TIGR03143 84 DVDFDGDIKTIKTA-----R-GDYKTLAVLIATGASPRKLG 118 (555)
T ss_pred EEEecCCEEEEEec-----C-CEEEEeEEEECCCCccCCCC
Confidence 88765554455542 2 25889999999999987643
No 317
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=97.96 E-value=2.2e-05 Score=80.11 Aligned_cols=92 Identities=34% Similarity=0.373 Sum_probs=69.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .+++++.....+.+++.||++++++.+.
T Consensus 132 ~~~~V~IIG~G~aGl~aA~~l~~~G~~V~vie~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 207 (449)
T TIGR01316 132 THKKVAVIGAGPAGLACASELAKAGHSVTVFEALHKPGGVVTYGIPEFRLPKEIVVTEIKTLKKLGVTFRMNFLVG---- 207 (449)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCcEeeecCCCccCCHHHHHHHHHHHHhCCcEEEeCCccC----
Confidence 46899999999999999999999999999999876541 2 2566777777778889999999887541
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecC-CCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGR-TPFT 318 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 318 (507)
..+++. + ....+|.||+|+|. .|..
T Consensus 208 ----~~v~~~-----~-~~~~yd~viiAtGa~~p~~ 233 (449)
T TIGR01316 208 ----KTATLE-----E-LFSQYDAVFIGTGAGLPKL 233 (449)
T ss_pred ----CcCCHH-----H-HHhhCCEEEEeCCCCCCCc
Confidence 112221 1 13468999999997 5654
No 318
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion]
Probab=97.95 E-value=8.7e-05 Score=71.43 Aligned_cols=98 Identities=23% Similarity=0.318 Sum_probs=76.0
Q ss_pred CcEEEECCChHHHHHHHHHHHC--------------CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--------------GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFAS 109 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--------------g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 109 (507)
-++|||||||.|+..|.+|+.. ..+|+|+|..+.+ .
T Consensus 219 Lh~VVVGGGPTGVEFAaEL~Dfi~~Dl~k~yp~l~~~i~vtLiEA~d~i-------------------------L----- 268 (491)
T KOG2495|consen 219 LHFVVVGGGPTGVEFAAELADFIPEDLRKIYPELKKDIKVTLIEAADHI-------------------------L----- 268 (491)
T ss_pred EEEEEECCCCcceeehHHHHHHHHHHHHHhhhcchhheEEEeeccchhH-------------------------H-----
Confidence 5799999999999999999763 3568888873211 0
Q ss_pred CCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEccCCceEEEEeCeEEEccCCCC
Q 010573 110 HGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 110 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
..+-.++..+.++.+.+.+|++..++ +..+..+...++..+|+...++|--||=|||..|
T Consensus 269 -------------------~mFdkrl~~yae~~f~~~~I~~~~~t~Vk~V~~~~I~~~~~~g~~~~iPYG~lVWatG~~~ 329 (491)
T KOG2495|consen 269 -------------------NMFDKRLVEYAENQFVRDGIDLDTGTMVKKVTEKTIHAKTKDGEIEEIPYGLLVWATGNGP 329 (491)
T ss_pred -------------------HHHHHHHHHHHHHHhhhccceeecccEEEeecCcEEEEEcCCCceeeecceEEEecCCCCC
Confidence 01123344555778889999999995 6778999999998899889999999999999887
Q ss_pred CC
Q 010573 189 KS 190 (507)
Q Consensus 189 ~~ 190 (507)
++
T Consensus 330 rp 331 (491)
T KOG2495|consen 330 RP 331 (491)
T ss_pred ch
Confidence 53
No 319
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent [].; PDB: 2PYX_B 2OAL_B 2E4G_A 2OAM_A 2OA1_B 2O9Z_A 3I3L_A 2AQJ_A 2ARD_A 2JKC_A ....
Probab=97.94 E-value=4e-05 Score=77.99 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEe--cCCE--EEEEccCCceEEEEeCeEEEccCCCCCCC
Q 010573 135 LTRGIEGLFKKNKVTYVKGYGKFI--SPSE--VSVDTIEGGNTVVKGKNIIIATGSDVKSL 191 (507)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~~~~--d~~~--~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 191 (507)
+...+.+...+.|++++.+++..+ +.+. ..|.+.+| +++++|.+|=|||.+....
T Consensus 156 fd~~L~~~A~~~Gv~~~~g~V~~v~~~~~g~i~~v~~~~g--~~i~ad~~IDASG~~s~L~ 214 (454)
T PF04820_consen 156 FDQFLRRHAEERGVEVIEGTVVDVELDEDGRITAVRLDDG--RTIEADFFIDASGRRSLLA 214 (454)
T ss_dssp HHHHHHHHHHHTT-EEEET-EEEEEE-TTSEEEEEEETTS--EEEEESEEEE-SGGG-CCC
T ss_pred HHHHHHHHHhcCCCEEEeCEEEEEEEcCCCCEEEEEECCC--CEEEEeEEEECCCccchhh
Confidence 334455666778999999976443 3332 35677777 8899999999999765433
No 320
>PRK12416 protoporphyrinogen oxidase; Provisional
Probab=97.94 E-value=1e-05 Score=83.31 Aligned_cols=41 Identities=37% Similarity=0.520 Sum_probs=37.1
Q ss_pred CcEEEECCChHHHHHHHHHHHC------CCcEEEEecCCCCCceecc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL------GLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~ 84 (507)
.+|+|||||++||+||+.|++. |++|+|+|+++++||.+..
T Consensus 2 ~~v~VIGaGisGL~aA~~L~~~~~~~~~~~~V~vlEa~~r~GGr~~T 48 (463)
T PRK12416 2 KTVVVIGGGITGLSTMFYLEKLKKDYNIDLNLILVEKEEYLGGKIHS 48 (463)
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhccCCCccEEEEecCCCccceEEE
Confidence 4799999999999999999986 3799999999999998754
No 321
>PRK07190 hypothetical protein; Provisional
Probab=97.94 E-value=0.00012 Score=75.32 Aligned_cols=98 Identities=21% Similarity=0.345 Sum_probs=75.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC---C---------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---S--------------------------------------- 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~--------------------------------------- 252 (507)
-.|+|||+|++|+-+|..|++.|.+|.++++.+.... .
T Consensus 6 ~dVlIVGAGPaGL~lA~~Lar~Gi~V~llEr~~~~~~~gra~~l~~~tle~L~~lGl~~~l~~~~~~~~~~~~~~~g~~i 85 (487)
T PRK07190 6 TDVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNARTLQLLELVDLFDELYPLGKPCNTSSVWANGKFI 85 (487)
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCCEEEEeCCCcccccccceEeCHHHHHHHHhcChHHHHHhhCccceeEEEecCCceE
Confidence 4699999999999999999999999999987654210 0
Q ss_pred ---------CC------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEe
Q 010573 253 ---------MD------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVS 311 (507)
Q Consensus 253 ---------~d------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a 311 (507)
++ ..+...+.+.+++.|++++.+++++.++.+++++.+++. +++++.++.||.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~q~~le~~L~~~~~~~Gv~v~~~~~v~~l~~~~~~v~v~~~-----~g~~v~a~~vVgA 160 (487)
T PRK07190 86 SRQSSWWEELEGCLHKHFLMLGQSYVEKLLDDKLKEAGAAVKRNTSVVNIELNQAGCLTTLS-----NGERIQSRYVIGA 160 (487)
T ss_pred eeccccCccCCcCCCCceEecCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCeeEEEEC-----CCcEEEeCEEEEC
Confidence 00 012233445666789999999999999888888777664 3458999999999
Q ss_pred ecCCCC
Q 010573 312 AGRTPF 317 (507)
Q Consensus 312 ~G~~p~ 317 (507)
.|.+..
T Consensus 161 DG~~S~ 166 (487)
T PRK07190 161 DGSRSF 166 (487)
T ss_pred CCCCHH
Confidence 998653
No 322
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=97.93 E-value=0.00012 Score=73.46 Aligned_cols=97 Identities=16% Similarity=0.386 Sum_probs=73.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCccCC---------CCC-------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADIVP---------SMD------------------------------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~~~---------~~d------------------------------- 254 (507)
.|+|||+|+.|+-+|..|++.| .+|+++++.+..-+ .+.
T Consensus 1 dv~IvGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 80 (382)
T TIGR01984 1 DVIIVGGGLVGLSLALALSRLGKIKIALIEANSPSAAQPGFDARSLALSYGSKQILEKLGLWPKLAPFATPILDIHVSDQ 80 (382)
T ss_pred CEEEECccHHHHHHHHHHhcCCCceEEEEeCCCccccCCCCCCeeEeccHHHHHHHHHCCChhhhHhhcCccceEEEEcC
Confidence 3899999999999999999999 99999998653210 000
Q ss_pred ------------------------HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEE
Q 010573 255 ------------------------GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVL 309 (507)
Q Consensus 255 ------------------------~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi 309 (507)
.++.+.+.+.+.+ .|++++.++++++++.+++++.+++. ++.++.+|.||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~-----~g~~~~ad~vV 155 (382)
T TIGR01984 81 GHFGATHLRASEFGLPALGYVVELADLGQALLSRLALLTNIQLYCPARYKEIIRNQDYVRVTLD-----NGQQLRAKLLI 155 (382)
T ss_pred CCCceEEechhhcCCCccEEEEEcHHHHHHHHHHHHhCCCcEEEcCCeEEEEEEcCCeEEEEEC-----CCCEEEeeEEE
Confidence 1123334455555 49999999999999887788877764 34579999999
Q ss_pred EeecCCCC
Q 010573 310 VSAGRTPF 317 (507)
Q Consensus 310 ~a~G~~p~ 317 (507)
.|.|....
T Consensus 156 ~AdG~~S~ 163 (382)
T TIGR01984 156 AADGANSK 163 (382)
T ss_pred EecCCChH
Confidence 99997753
No 323
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit.
Probab=97.93 E-value=3.8e-05 Score=83.65 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=71.8
Q ss_pred EEEEcCcHHHHHHHHHHHhcC---CeeEEEcccCccC--C-CCCH---------HHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 217 LVVIGAGYIGLEMGSVWARLG---SEVTVVEFAADIV--P-SMDG---------EIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 217 vvVvG~G~~g~e~A~~l~~~g---~~Vtlv~~~~~~~--~-~~d~---------~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
++|||+|+.|+.+|..+.+.+ .+||++++.+.+. + .+.. ++.....+.+++.||+++++++|+++
T Consensus 1 iVIIG~G~AG~~aa~~l~~~~~~~~~Itvi~~e~~~~y~r~~L~~~l~g~~~~~~l~~~~~~~~~~~gv~~~~g~~V~~I 80 (785)
T TIGR02374 1 LVLVGNGMAGHRCIEEVLKLNRHMFEITIFGEEPHPNYNRILLSSVLQGEADLDDITLNSKDWYEKHGITLYTGETVIQI 80 (785)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCCeEEEEeCCCCCCcccccccHHHCCCCCHHHccCCCHHHHHHCCCEEEcCCeEEEE
Confidence 589999999999999988764 5899999887641 1 1111 12222356678899999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.+... +.+. +++++.+|.+|+|||..|....
T Consensus 81 d~~~k~--V~~~-----~g~~~~yD~LVlATGs~p~~p~ 112 (785)
T TIGR02374 81 DTDQKQ--VITD-----AGRTLSYDKLILATGSYPFILP 112 (785)
T ss_pred ECCCCE--EEEC-----CCcEeeCCEEEECCCCCcCCCC
Confidence 765433 3333 4568999999999999987654
No 324
>PLN02507 glutathione reductase
Probab=97.93 E-value=0.00012 Score=75.71 Aligned_cols=96 Identities=15% Similarity=0.104 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..+++.|.+|+|+++.+.+-.. ++
T Consensus 203 ~k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~~~l~~-------------------------------------~d-- 243 (499)
T PLN02507 203 PKRAVVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRG-------------------------------------FD-- 243 (499)
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEecCCcCcc-------------------------------------cC--
Confidence 358999999999999999999999999999985432100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+. .+.+.+.+.+| .++.+|.+++|+|.+|.
T Consensus 244 ----------~~~~~~l~~~l~~~GI~i~~~~~V~~i~~~~~~~~v~~~~g--~~i~~D~vl~a~G~~pn 301 (499)
T PLN02507 244 ----------DEMRAVVARNLEGRGINLHPRTNLTQLTKTEGGIKVITDHG--EEFVADVVLFATGRAPN 301 (499)
T ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEeCCeEEEEECCC--cEEEcCEEEEeecCCCC
Confidence 0111223455677899998873 44443 34555666566 67999999999999985
No 325
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=97.93 E-value=2.7e-05 Score=79.88 Aligned_cols=90 Identities=30% Similarity=0.357 Sum_probs=70.5
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
..+++|+|||+|+.|+++|..|++.|.+|+++++.+.+. + ..+.++.....+.+++.|+++++++.+..
T Consensus 138 ~~~~~VvIIGgGpaGl~aA~~l~~~g~~V~lie~~~~~gG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~-- 215 (457)
T PRK11749 138 KTGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLLRYGIPEFRLPKDIVDREVERLLKLGVEIRTNTEVGR-- 215 (457)
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCCCCcEeeccCCCccCCHHHHHHHHHHHHHcCCEEEeCCEECC--
Confidence 457899999999999999999999999999999887652 2 24567777778888899999998887521
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.+++. + ..+.+|.||+|+|..
T Consensus 216 ------~v~~~-----~-~~~~~d~vvlAtGa~ 236 (457)
T PRK11749 216 ------DITLD-----E-LRAGYDAVFIGTGAG 236 (457)
T ss_pred ------ccCHH-----H-HHhhCCEEEEccCCC
Confidence 12221 1 137799999999986
No 326
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=97.92 E-value=0.0001 Score=76.30 Aligned_cols=138 Identities=26% Similarity=0.294 Sum_probs=85.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-------------------------------C---------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-------------------------------M--------- 253 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------------------------~--------- 253 (507)
.|+|+|||+|.+|+-.+..+.+.|.+++++++.+.+... +
T Consensus 1 ~krVaVIGaG~sGL~a~k~l~e~g~~~~~fE~~~~iGG~W~~~~~~~~g~~~~y~sl~~n~sk~~~~fsdfp~p~~~p~f 80 (531)
T PF00743_consen 1 AKRVAVIGAGPSGLAAAKNLLEEGLEVTCFEKSDDIGGLWRYTENPEDGRSSVYDSLHTNTSKEMMAFSDFPFPEDYPDF 80 (531)
T ss_dssp --EEEEE--SHHHHHHHHHHHHTT-EEEEEESSSSSSGGGCHSTTCCCSEGGGSTT-B-SS-GGGSCCTTS-HCCCCSSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCeEEecCCCCCccCeeCCcCCCCccccccceEEeeCchHhcCCCcCCCCCCCCC
Confidence 379999999999999999999999999999988765210 0
Q ss_pred --CHHHHHHHHHHHHhcCc--EEEcCceEEEEEEcC-----CeEEEEEeecCCCceEEEEcCEEEEeecCC--CCCCCCC
Q 010573 254 --DGEIRKQFQRSLEKQKM--KFMLKTKVVGVDLSG-----DGVKLTLEPAAGGEKTILEADVVLVSAGRT--PFTAGLG 322 (507)
Q Consensus 254 --d~~~~~~~~~~l~~~Gv--~i~~~~~v~~i~~~~-----~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~--p~~~~l~ 322 (507)
..++.+.++...+.-++ .+.++++|++++..+ +...|+.. .++..++..+|.|++|+|.. |+.+..
T Consensus 81 ~~~~~v~~Yl~~Ya~~f~L~~~I~fnt~V~~v~~~~d~~~~~~W~V~~~--~~g~~~~~~fD~VvvatG~~~~P~~P~~- 157 (531)
T PF00743_consen 81 PSHSEVLEYLESYAEHFGLRKHIRFNTEVVSVERDPDFSATGKWEVTTE--NDGKEETEEFDAVVVATGHFSKPNIPEP- 157 (531)
T ss_dssp EBHHHHHHHHHHHHHHTTGGGGEETSEEEEEEEEETTTT-ETEEEEEET--TTTEEEEEEECEEEEEE-SSSCESB----
T ss_pred CCHHHHHHHHHHHHhhhCCcceEEEccEEeEeeeccccCCCceEEEEee--cCCeEEEEEeCeEEEcCCCcCCCCCChh-
Confidence 04677777777776665 588999999998754 24556543 34444567799999999964 443310
Q ss_pred CcccCceecCCCCeecCCCCCC----CCCCeEEecCCC
Q 010573 323 LDKIGVETDKMGRIPVNERFAT----NIPGVYAIGDVI 356 (507)
Q Consensus 323 ~~~~gl~~~~~G~i~Vd~~~~t----~~~~IyA~GD~a 356 (507)
.-.|++.- .|.+.-...++. ..+.|-++|-..
T Consensus 158 -~~~G~e~F-~G~i~HS~~yr~~~~f~gKrVlVVG~g~ 193 (531)
T PF00743_consen 158 -SFPGLEKF-KGEIIHSKDYRDPEPFKGKRVLVVGGGN 193 (531)
T ss_dssp ---CTGGGH-CSEEEEGGG--TGGGGTTSEEEEESSSH
T ss_pred -hhhhhhcC-CeeEEccccCcChhhcCCCEEEEEeCCH
Confidence 01133321 244443333331 246788888544
No 327
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.91 E-value=0.00013 Score=74.85 Aligned_cols=98 Identities=18% Similarity=0.252 Sum_probs=66.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..+++.|.+|+|||+.+.+.. . .+
T Consensus 174 ~~~vvIIGgG~ig~E~A~~l~~~G~~Vtlie~~~~il~---------~----------------------------~d-- 214 (466)
T PRK06115 174 PKHLVVIGAGVIGLELGSVWRRLGAQVTVVEYLDRICP---------G----------------------------TD-- 214 (466)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCCCCC---------C----------------------------CC--
Confidence 46899999999999999999999999999998543311 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEcc---CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTI---EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~---~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+. .+.+.+... +|+...+.+|.|++|+|.+|.
T Consensus 215 ----------~~~~~~l~~~l~~~gV~i~~~~~V~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~pn 277 (466)
T PRK06115 215 ----------TETAKTLQKALTKQGMKFKLGSKVTGATAGADGVSLTLEPAAGGAAETLQADYVLVAIGRRPY 277 (466)
T ss_pred ----------HHHHHHHHHHHHhcCCEEEECcEEEEEEEcCCeEEEEEEEcCCCceeEEEeCEEEEccCCccc
Confidence 0011122345667789998773 44443 234444322 343467999999999999985
No 328
>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.91 E-value=8.1e-05 Score=78.17 Aligned_cols=46 Identities=26% Similarity=0.249 Sum_probs=34.1
Q ss_pred CCCeecCCCCCC----------CCCCeEEecCCCC-CCC--------cHhHHHHHHHHHHHHHcC
Q 010573 333 MGRIPVNERFAT----------NIPGVYAIGDVIP-GPM--------LAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 333 ~G~i~Vd~~~~t----------~~~~IyA~GD~a~-~~~--------~~~~A~~~g~~aa~~i~~ 378 (507)
.|+|.+|...+| ++||+||+|+|++ +.. ....|.-.|++|++++..
T Consensus 339 ~GGi~vd~~g~~~~~d~~~~~t~IpGLYAaGE~a~~g~hGanrlggnsl~~a~v~Gr~Ag~~aa~ 403 (570)
T PRK05675 339 MGGVATNIHGQAITQDANGNDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEK 403 (570)
T ss_pred CCCcccCCCCeeecccccccCCccCCeeecccccccCCCCccccccccHHHHHHHHHHHHHHHHH
Confidence 377888777664 7999999999974 221 235678889999988863
No 329
>TIGR02731 phytoene_desat phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway.
Probab=97.91 E-value=1.2e-05 Score=82.46 Aligned_cols=39 Identities=31% Similarity=0.462 Sum_probs=36.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
+|+|||||++|++||+.|++.|++|+|+|+.+.+||.+.
T Consensus 1 ~v~IiGaG~aGl~aA~~L~~~G~~v~vlE~~~~~GG~~~ 39 (453)
T TIGR02731 1 RVAIAGAGLAGLSCAKYLADAGHTPIVLEARDVLGGKVA 39 (453)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCCcc
Confidence 589999999999999999999999999999999999764
No 330
>PRK10157 putative oxidoreductase FixC; Provisional
Probab=97.90 E-value=0.00019 Score=72.77 Aligned_cols=97 Identities=20% Similarity=0.286 Sum_probs=71.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC------------------CCC------C----------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV------------------PSM------D---------------- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------~~~------d---------------- 254 (507)
-.|+|||+|+.|+-+|..|++.|.+|.++++.+.+. +.+ .
T Consensus 6 ~DViIVGaGpAG~~aA~~La~~G~~V~llEr~~~~g~k~~~gg~l~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (428)
T PRK10157 6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSA 85 (428)
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEEcCCCCCCcccccceechhhHHHHhhhhhhcCcccceeeeeeEEEEcCCCc
Confidence 369999999999999999999999999999764321 000 0
Q ss_pred ----------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEee
Q 010573 255 ----------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSA 312 (507)
Q Consensus 255 ----------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~ 312 (507)
.++.+.+.+..++.|++++.+++|++++.+++.+..... ++.++.+|.||.|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~R~~fD~~L~~~a~~~Gv~i~~~~~V~~i~~~~g~v~~v~~-----~g~~i~A~~VI~A~ 160 (428)
T PRK10157 86 MTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEA-----DGDVIEAKTVILAD 160 (428)
T ss_pred eeeccccccccCCCCCceeeEHHHHHHHHHHHHHHCCCEEECCCEEEEEEEeCCEEEEEEc-----CCcEEECCEEEEEe
Confidence 011234555666789999999999998766666543322 34579999999999
Q ss_pred cCCC
Q 010573 313 GRTP 316 (507)
Q Consensus 313 G~~p 316 (507)
|...
T Consensus 161 G~~s 164 (428)
T PRK10157 161 GVNS 164 (428)
T ss_pred CCCH
Confidence 9854
No 331
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=97.90 E-value=0.00013 Score=74.57 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=67.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..|++.|.+|+|+++.+.+... . .
T Consensus 166 ~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~il~~------~-------d-------------------------- 206 (450)
T TIGR01421 166 PKRVVIVGAGYIAVELAGVLHGLGSETHLVIRHERVLRS------F-------D-------------------------- 206 (450)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCcc------c-------C--------------------------
Confidence 368999999999999999999999999999985433110 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecC---CEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~---~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+|+++.+. +..+.. ....+.+.++ ...+.+|.+++|+|.+|..
T Consensus 207 ----------~~~~~~~~~~l~~~gI~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~i~~D~vi~a~G~~pn~ 267 (450)
T TIGR01421 207 ----------SMISETITEEYEKEGINVHKLSKPVKVEKTVEGKLVIHFEDG-KSIDDVDELIWAIGRKPNT 267 (450)
T ss_pred ----------HHHHHHHHHHHHHcCCEEEcCCEEEEEEEeCCceEEEEECCC-cEEEEcCEEEEeeCCCcCc
Confidence 0011223455667789988873 444432 2245555554 2569999999999999863
No 332
>PLN02328 lysine-specific histone demethylase 1 homolog
Probab=97.88 E-value=1.8e-05 Score=84.54 Aligned_cols=44 Identities=34% Similarity=0.558 Sum_probs=39.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
.....+|+|||||++|++||..|++.|++|+|+|+++.+||...
T Consensus 235 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~v~E~~~r~GGr~~ 278 (808)
T PLN02328 235 GVEPANVVVVGAGLAGLVAARQLLSMGFKVVVLEGRARPGGRVK 278 (808)
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeccccCCCccc
Confidence 34567999999999999999999999999999999999987753
No 333
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.88 E-value=4e-05 Score=78.57 Aligned_cols=92 Identities=25% Similarity=0.394 Sum_probs=71.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..+++.|.+|+++++.+.+. + .+++++.....+.+++.|++++.++.+..-
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~-- 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD-- 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc--
Confidence 46899999999999999999999999999999887542 2 246677777778889999999999876321
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+.+. .....+|.||+|+|..+..
T Consensus 218 ------~~~~------~~~~~~D~vilAtGa~~~~ 240 (467)
T TIGR01318 218 ------ISLD------DLLEDYDAVFLGVGTYRSM 240 (467)
T ss_pred ------cCHH------HHHhcCCEEEEEeCCCCCC
Confidence 1111 1124699999999998753
No 334
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only]
Probab=97.88 E-value=0.00015 Score=69.96 Aligned_cols=36 Identities=31% Similarity=0.531 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
+.+|+|||||.+|+++|..|.++|.+|.|+|+.+.+
T Consensus 2 ~~~VvIvGgGI~Gla~A~~l~r~G~~v~VlE~~e~~ 37 (420)
T KOG2614|consen 2 EPKVVIVGGGIVGLATALALHRKGIDVVVLESREDP 37 (420)
T ss_pred CCcEEEECCcHHHHHHHHHHHHcCCeEEEEeecccc
Confidence 358999999999999999999999999999996644
No 335
>PLN02661 Putative thiazole synthesis
Probab=97.87 E-value=0.00084 Score=64.77 Aligned_cols=166 Identities=19% Similarity=0.268 Sum_probs=97.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhc-CCeeEEEcccCccCC---------------------------CCCH----------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADIVP---------------------------SMDG---------- 255 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~---------------------------~~d~---------- 255 (507)
.-.|+|||+|..|+-+|..+++. |.+|+++++...+.. .++.
T Consensus 92 ~~DVlIVGaG~AGl~AA~~La~~~g~kV~viEk~~~~GGG~~~gg~l~~~~vv~~~a~e~LeElGV~fd~~dgy~vv~ha 171 (357)
T PLN02661 92 DTDVVIVGAGSAGLSCAYELSKNPNVKVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVPYDEQENYVVIKHA 171 (357)
T ss_pred cCCEEEECCHHHHHHHHHHHHHcCCCeEEEEecCcccccceeeCcccccccccccHHHHHHHHcCCCcccCCCeeEecch
Confidence 35799999999999999999976 889999998654310 0111
Q ss_pred -HHHHHHH-HHHHhcCcEEEcCceEEEEEEcCCeEE-EEEe------ecCC---CceEEEEcCEEEEeecCCCCCCCCCC
Q 010573 256 -EIRKQFQ-RSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLE------PAAG---GEKTILEADVVLVSAGRTPFTAGLGL 323 (507)
Q Consensus 256 -~~~~~~~-~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~------~~~~---g~~~~i~~D~vi~a~G~~p~~~~l~~ 323 (507)
+....+. +.+++.|++++.++.+.++..+++.+. +.+. +... .+...+.++.||+|||..+.......
T Consensus 172 ~e~~stLi~ka~~~~gVkI~~~t~V~DLI~~~grVaGVVvnw~~v~~~~~~~s~~dp~~I~AkaVVlATGh~g~~ga~~~ 251 (357)
T PLN02661 172 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGDRVGGVVTNWALVAQNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 251 (357)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCeEeeeEEecCCEEEEEEeecchhhhccCCCCccceeEEECCEEEEcCCCCCcchhhhh
Confidence 1112233 344457999999999999877666543 3321 1111 12347899999999996653221111
Q ss_pred c---ccCcee--cCCCCeecCC-------CCCCCCCCeEEecCCC----CCCCc--HhHH-HHHHHHHHHHHcCC
Q 010573 324 D---KIGVET--DKMGRIPVNE-------RFATNIPGVYAIGDVI----PGPML--AHKA-EEDGVACVEFLAGK 379 (507)
Q Consensus 324 ~---~~gl~~--~~~G~i~Vd~-------~~~t~~~~IyA~GD~a----~~~~~--~~~A-~~~g~~aa~~i~~~ 379 (507)
. ..|+.. ......+++. +.+--+||+|++|=.+ +.|.. ...+ ...|+.||+.++.+
T Consensus 252 ~~~~~~g~~~~~pg~~~~~~~~~e~~~v~~t~ev~pgl~~~gm~~~~~~g~~rmgp~fg~m~~sg~k~a~~~~~~ 326 (357)
T PLN02661 252 KRLKSIGMIDSVPGMKALDMNAAEDAIVRLTREVVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKA 326 (357)
T ss_pred hcccccCCccCCCCccccchhhHHHHHHhccCcccCCEEEeccchhhhcCCCccCchhHhHHhhhHHHHHHHHHH
Confidence 1 111110 0011222221 1222479999999666 33321 1223 35788888888754
No 336
>PRK06753 hypothetical protein; Provisional
Probab=97.87 E-value=0.00012 Score=72.98 Aligned_cols=98 Identities=18% Similarity=0.299 Sum_probs=71.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-----CCCHHH---------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----SMDGEI--------------------------------- 257 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----~~d~~~--------------------------------- 257 (507)
+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. .+.+..
T Consensus 2 ~V~IvGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~g~gi~l~~~~~~~L~~~gl~~~~~~~~~~~~~~~~~~~~g~~~ 81 (373)
T PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESVKEVGAGIGIGDNVIKKLGNHDLAKGIKNAGQILSTMNLLDDKGTLL 81 (373)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEecCCcccccccceeeChHHHHHHHhcChHHHHHhcCCcccceeEEcCCCCEE
Confidence 699999999999999999999999999998865311 000000
Q ss_pred ---------------HHHHHHHHHh--cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 258 ---------------RKQFQRSLEK--QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 258 ---------------~~~~~~~l~~--~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
...+.+.|.+ .+.++++++++++++.+++++.+++. +++++.+|+||.|.|.+..+
T Consensus 82 ~~~~~~~~~~~~~i~R~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~~~~vigadG~~S~v 154 (373)
T PRK06753 82 NKVKLKSNTLNVTLHRQTLIDIIKSYVKEDAIFTGKEVTKIENETDKVTIHFA-----DGESEAFDLCIGADGIHSKV 154 (373)
T ss_pred eecccccCCccccccHHHHHHHHHHhCCCceEEECCEEEEEEecCCcEEEEEC-----CCCEEecCEEEECCCcchHH
Confidence 0112222322 24578889999999887888888765 45688999999999977654
No 337
>PRK07846 mycothione reductase; Reviewed
Probab=97.87 E-value=0.00016 Score=73.96 Aligned_cols=95 Identities=22% Similarity=0.302 Sum_probs=64.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+... .+
T Consensus 166 ~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~~~ll~~-------------------------------------~d-- 206 (451)
T PRK07846 166 PESLVIVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLRH-------------------------------------LD-- 206 (451)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-------------------------------------cC--
Confidence 468999999999999999999999999999985433110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+ +.+++++.+ .+..++ ...+.+.+.+| ..+.+|.|++|+|.+|.
T Consensus 207 ----------~~~~~~l~~l~-~~~v~i~~~~~v~~i~~~~~~v~v~~~~g--~~i~~D~vl~a~G~~pn 263 (451)
T PRK07846 207 ----------DDISERFTELA-SKRWDVRLGRNVVGVSQDGSGVTLRLDDG--STVEADVLLVATGRVPN 263 (451)
T ss_pred ----------HHHHHHHHHHH-hcCeEEEeCCEEEEEEEcCCEEEEEECCC--cEeecCEEEEEECCccC
Confidence 00001112222 346887766 344443 23455666666 67999999999999985
No 338
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=0.00058 Score=65.27 Aligned_cols=99 Identities=26% Similarity=0.405 Sum_probs=72.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCe-eEEEcccCc---c--------CCC-----CCHHHHHHHHHHHHhcCcEEEcCce
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAAD---I--------VPS-----MDGEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~---~--------~~~-----~d~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
-.|+|||+|+.|+-.|-.+.+.+.+ +.+++.... + .|. ..+++.+...++.+.-|+++.. ..
T Consensus 4 ~DviIIG~GPAGl~AAiya~r~~l~~~li~~~~~~gg~~~~~~~venypg~~~~~~g~~L~~~~~~~a~~~~~~~~~-~~ 82 (305)
T COG0492 4 YDVIIIGGGPAGLTAAIYAARAGLKVVLILEGGEPGGQLTKTTDVENYPGFPGGILGPELMEQMKEQAEKFGVEIVE-DE 82 (305)
T ss_pred eeEEEECCCHHHHHHHHHHHHcCCCcEEEEecCCcCCccccceeecCCCCCccCCchHHHHHHHHHHHhhcCeEEEE-EE
Confidence 3689999999999999999999988 555554311 1 121 2356777777777788999887 77
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 278 v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.+++..++...+... +++ +.++.||+|+|..+....
T Consensus 83 v~~v~~~~~~F~v~t~-----~~~-~~ak~vIiAtG~~~~~~~ 119 (305)
T COG0492 83 VEKVELEGGPFKVKTD-----KGT-YEAKAVIIATGAGARKLG 119 (305)
T ss_pred EEEEeecCceEEEEEC-----CCe-EEEeEEEECcCCcccCCC
Confidence 7777765545566653 444 999999999999887654
No 339
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis]
Probab=97.86 E-value=4.4e-05 Score=74.17 Aligned_cols=36 Identities=44% Similarity=0.641 Sum_probs=32.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
....|||||||||.||..||..++|.|.+.+|+..+
T Consensus 25 ~~~~~dVvVIGgGHAG~EAAaAaaR~Ga~TlLlT~~ 60 (679)
T KOG2311|consen 25 STSTYDVVVIGGGHAGCEAAAAAARLGARTLLLTHN 60 (679)
T ss_pred CCCcccEEEECCCccchHHHHHHHhcCCceEEeecc
Confidence 456799999999999999999999999999999874
No 340
>PLN02676 polyamine oxidase
Probab=97.85 E-value=1.9e-05 Score=81.17 Aligned_cols=43 Identities=23% Similarity=0.445 Sum_probs=39.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-cEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~ 84 (507)
..+||+|||||++|++||.+|++.|. +|+|+|+++.+||.+..
T Consensus 25 ~~~~v~IIGaG~sGL~aa~~L~~~g~~~v~vlE~~~~~GG~~~~ 68 (487)
T PLN02676 25 PSPSVIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRK 68 (487)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEecCCCCCCCccee
Confidence 45799999999999999999999998 69999999999997653
No 341
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=97.85 E-value=0.00019 Score=73.78 Aligned_cols=98 Identities=18% Similarity=0.271 Sum_probs=66.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..|++.|.+|+++++.+.+... .
T Consensus 169 ~k~v~VIGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~------------------~---------------------- 208 (460)
T PRK06292 169 PKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPL------------------E---------------------- 208 (460)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc------------------h----------------------
Confidence 368999999999999999999999999999986543210 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--C-EEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--S-EVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~-~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
...+...+.+.+++. |+++.+ .+..++. . .+.+...+++..++.+|.+++|+|.+|..
T Consensus 209 ---------d~~~~~~~~~~l~~~-I~i~~~~~v~~i~~~~~~~v~~~~~~~~~~~i~~D~vi~a~G~~p~~ 270 (460)
T PRK06292 209 ---------DPEVSKQAQKILSKE-FKIKLGAKVTSVEKSGDEKVEELEKGGKTETIEADYVLVATGRRPNT 270 (460)
T ss_pred ---------hHHHHHHHHHHHhhc-cEEEcCCEEEEEEEcCCceEEEEEcCCceEEEEeCEEEEccCCccCC
Confidence 001112233455666 888766 3444432 1 34443344545789999999999999853
No 342
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
Probab=97.83 E-value=0.00035 Score=61.40 Aligned_cols=165 Identities=18% Similarity=0.235 Sum_probs=99.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-------CCC-------------------------------H
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-------SMD-------------------------------G 255 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~~d-------------------------------~ 255 (507)
-..|+|||+|++|+-+|..|++.|.+|.+++++-.+.. .|+ .
T Consensus 30 esDViIVGaGPsGLtAAyyLAk~g~kV~i~E~~ls~GGG~w~GGmlf~~iVv~~~a~~iL~e~gI~ye~~e~g~~v~ds~ 109 (262)
T COG1635 30 ESDVIIVGAGPSGLTAAYYLAKAGLKVAIFERKLSFGGGIWGGGMLFNKIVVREEADEILDEFGIRYEEEEDGYYVADSA 109 (262)
T ss_pred hccEEEECcCcchHHHHHHHHhCCceEEEEEeecccCCcccccccccceeeecchHHHHHHHhCCcceecCCceEEecHH
Confidence 46799999999999999999999999999998765521 111 1
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCC-eEE-EEEe--e----cCCCceEEEEcCEEEEeecCCCCCCCCCCcc--
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD-GVK-LTLE--P----AAGGEKTILEADVVLVSAGRTPFTAGLGLDK-- 325 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~-v~~~--~----~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~-- 325 (507)
+....+....-+.|.+++..+.+..+--.++ ++. +.+. . .---|.-.++++.|+-+||.....-.+..++
T Consensus 110 e~~skl~~~a~~aGaki~n~~~veDvi~r~~~rVaGvVvNWt~V~~~~lhvDPl~i~a~~VvDaTGHda~v~~~~~kr~~ 189 (262)
T COG1635 110 EFASKLAARALDAGAKIFNGVSVEDVIVRDDPRVAGVVVNWTPVQMAGLHVDPLTIRAKAVVDATGHDAEVVSFLAKRIP 189 (262)
T ss_pred HHHHHHHHHHHhcCceeeecceEEEEEEecCCceEEEEEecchhhhcccccCcceeeEEEEEeCCCCchHHHHHHHHhcc
Confidence 2333333444456899999999988765555 443 2221 0 0001445789999999999776442211111
Q ss_pred -cCceecCCCCeecC-------CCCCCCCCCeEEecCCC----CCCCc--Hh-HHHHHHHHHHHHHcC
Q 010573 326 -IGVETDKMGRIPVN-------ERFATNIPGVYAIGDVI----PGPML--AH-KAEEDGVACVEFLAG 378 (507)
Q Consensus 326 -~gl~~~~~G~i~Vd-------~~~~t~~~~IyA~GD~a----~~~~~--~~-~A~~~g~~aa~~i~~ 378 (507)
.++++...+..+.+ ++.+--.||+|++|=.+ +.|.. .. .=..+|+.||+.++.
T Consensus 190 ~l~~~~~Ge~~mw~e~~E~lvV~~T~eV~pgL~vaGMa~~av~G~pRMGPiFGgMllSGkkaAe~i~e 257 (262)
T COG1635 190 ELGIEVPGEKSMWAERGEDLVVENTGEVYPGLYVAGMAVNAVHGLPRMGPIFGGMLLSGKKAAEEILE 257 (262)
T ss_pred ccccccCCCcchhhhHHHHHHHhccccccCCeEeehhhHHhhcCCcccCchhhhhhhchHHHHHHHHH
Confidence 12332222223322 12233579999999666 22221 11 223467888877654
No 343
>PRK14694 putative mercuric reductase; Provisional
Probab=97.82 E-value=0.00014 Score=74.81 Aligned_cols=94 Identities=20% Similarity=0.346 Sum_probs=65.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..|+++|.+|+++++...+.. ..
T Consensus 178 ~~~vvViG~G~~G~E~A~~l~~~g~~Vtlv~~~~~l~~--------------~~-------------------------- 217 (468)
T PRK14694 178 PERLLVIGASVVALELAQAFARLGSRVTVLARSRVLSQ--------------ED-------------------------- 217 (468)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEECCCCCCC--------------CC--------------------------
Confidence 35899999999999999999999999999987321100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..++ ...+.+.+.++ ++.+|.||+|+|.+|.
T Consensus 218 ----------~~~~~~l~~~l~~~GI~v~~~~~v~~i~~~~~~~~v~~~~~---~i~~D~vi~a~G~~pn 274 (468)
T PRK14694 218 ----------PAVGEAIEAAFRREGIEVLKQTQASEVDYNGREFILETNAG---TLRAEQLLVATGRTPN 274 (468)
T ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCEEEEEECCC---EEEeCEEEEccCCCCC
Confidence 001122345667789999887 444443 33344544333 5999999999999985
No 344
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=97.81 E-value=0.00023 Score=72.84 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=64.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..|++.|.+|+||++.+.+... .+ .
T Consensus 169 ~k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~~ll~~-------------------------------------~d-~ 210 (452)
T TIGR03452 169 PESLVIVGGGYIAAEFAHVFSALGTRVTIVNRSTKLLRH-------------------------------------LD-E 210 (452)
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEEccCccccc-------------------------------------cC-H
Confidence 368999999999999999999999999999985432110 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
.+...+.+.+ +.+++++.+ .+..++ ...+.+.+.+| .++.+|.+++|+|.+|.
T Consensus 211 -----------~~~~~l~~~~-~~gI~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~~D~vl~a~G~~pn 266 (452)
T TIGR03452 211 -----------DISDRFTEIA-KKKWDIRLGRNVTAVEQDGDGVTLTLDDG--STVTADVLLVATGRVPN 266 (452)
T ss_pred -----------HHHHHHHHHH-hcCCEEEeCCEEEEEEEcCCeEEEEEcCC--CEEEcCEEEEeeccCcC
Confidence 0001112222 346888766 344443 34456666666 57999999999999985
No 345
>PLN02852 ferredoxin-NADP+ reductase
Probab=97.81 E-value=6.2e-05 Score=76.64 Aligned_cols=91 Identities=20% Similarity=0.294 Sum_probs=66.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHh--cCCeeEEEcccCccC--------CC--CCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWAR--LGSEVTVVEFAADIV--------PS--MDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~--------~~--~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.+++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ..+.+...+.+.++..+|+++.+..+-.
T Consensus 25 ~~~~VaIVGaGPAGl~AA~~L~~~~~g~~Vtv~E~~p~pgGlvr~gvaP~~~~~k~v~~~~~~~~~~~~v~~~~nv~vg~ 104 (491)
T PLN02852 25 EPLHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGR 104 (491)
T ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCeEEEEecCCCCcceEeeccCCCcchhHHHHHHHHHHHHHCCeEEEcCEEECc
Confidence 47899999999999999999987 799999999988763 11 1123444566677778999988765521
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.++++ + -...+|.||+|+|..+.
T Consensus 105 --------dvtl~-----~-L~~~yDaVIlAtGa~~~ 127 (491)
T PLN02852 105 --------DVSLS-----E-LRDLYHVVVLAYGAESD 127 (491)
T ss_pred --------cccHH-----H-HhhhCCEEEEecCCCCC
Confidence 12222 1 12468999999999863
No 346
>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown]
Probab=97.81 E-value=0.00027 Score=65.28 Aligned_cols=40 Identities=33% Similarity=0.509 Sum_probs=35.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALG 79 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~G 79 (507)
+...||+||||||..|++.|.+|.-+ +.+|.|+|++..++
T Consensus 45 s~~~~D~VvvGgGiVGlAsARel~lrhp~l~V~vleke~~la 86 (453)
T KOG2665|consen 45 SKERYDLVVVGGGIVGLASARELSLRHPSLKVAVLEKEKSLA 86 (453)
T ss_pred ccccccEEEECCceeehhhhHHHhhcCCCceEEeeehhhhhc
Confidence 34579999999999999999998765 89999999987765
No 347
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion]
Probab=97.81 E-value=0.00027 Score=65.51 Aligned_cols=79 Identities=27% Similarity=0.363 Sum_probs=52.0
Q ss_pred CCeeEEEcccCccCCCCCHHHHHHHHHHHHh------cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEE
Q 010573 237 GSEVTVVEFAADIVPSMDGEIRKQFQRSLEK------QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVL 309 (507)
Q Consensus 237 g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~------~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi 309 (507)
|..|--.+|....+|.. .++...+...+++ .-+++.++++|+.|...++.+. |++.+ .+|+...+..|.||
T Consensus 122 GHSvpRTHr~s~plppg-fei~~~L~~~l~k~as~~pe~~ki~~nskvv~il~n~gkVsgVeymd-~sgek~~~~~~~VV 199 (477)
T KOG2404|consen 122 GHSVPRTHRSSGPLPPG-FEIVKALSTRLKKKASENPELVKILLNSKVVDILRNNGKVSGVEYMD-ASGEKSKIIGDAVV 199 (477)
T ss_pred CCCCCcccccCCCCCCc-hHHHHHHHHHHHHhhhcChHHHhhhhcceeeeeecCCCeEEEEEEEc-CCCCccceecCceE
Confidence 44554445666555432 2455555555543 2578899999999997777765 66653 44566678999999
Q ss_pred EeecCCCC
Q 010573 310 VSAGRTPF 317 (507)
Q Consensus 310 ~a~G~~p~ 317 (507)
+|+|--..
T Consensus 200 latGGf~y 207 (477)
T KOG2404|consen 200 LATGGFGY 207 (477)
T ss_pred EecCCcCc
Confidence 99985443
No 348
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed
Probab=97.81 E-value=8.2e-05 Score=80.94 Aligned_cols=34 Identities=32% Similarity=0.538 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGA 77 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~ 77 (507)
++|+||||||||+++|+.|++. |++|+|+|+++.
T Consensus 1 m~V~IIGaGpAGLaaAi~L~~~~~G~~V~vlEr~~~ 36 (765)
T PRK08255 1 MRIVCIGGGPAGLYFALLMKLLDPAHEVTVVERNRP 36 (765)
T ss_pred CeEEEECCCHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence 3799999999999999999998 899999999765
No 349
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.81 E-value=0.00023 Score=73.18 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=63.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
.+++|||||+.|+.+|..+++.|.+|+||++.+.+... .+
T Consensus 175 ~~vvIiGgG~iG~E~A~~l~~~G~~Vtlv~~~~~il~~-------------------------------------~d--- 214 (471)
T PRK06467 175 KRLLVMGGGIIGLEMGTVYHRLGSEVDVVEMFDQVIPA-------------------------------------AD--- 214 (471)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEecCCCCCCc-------------------------------------CC---
Confidence 58999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccC--CceEEEEeCeEEEccCCCCC
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIE--GGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~--g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++. ++++.+. +..+ +.+.+.+.+.+ ++..++.+|.+|+|+|.+|.
T Consensus 215 ---------~~~~~~~~~~l~~~-v~i~~~~~v~~i~~~~~~~~v~~~~~~~~~~~i~~D~vi~a~G~~pn 275 (471)
T PRK06467 215 ---------KDIVKVFTKRIKKQ-FNIMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAVGRVPN 275 (471)
T ss_pred ---------HHHHHHHHHHHhhc-eEEEcCCEEEEEEEcCCEEEEEEEeCCCcceEEEeCEEEEeeccccc
Confidence 00111122334444 7777663 3333 23445554433 22357999999999999985
No 350
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=97.81 E-value=0.00034 Score=70.35 Aligned_cols=103 Identities=19% Similarity=0.252 Sum_probs=75.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc--CC-----------------------------C-----------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI--VP-----------------------------S----------- 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~--~~-----------------------------~----------- 252 (507)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.. .. .
T Consensus 3 ~dV~IvGaGpaGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~a~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~g~ 82 (392)
T PRK08243 3 TQVAIIGAGPAGLLLGQLLHLAGIDSVVLERRSREYVEGRIRAGVLEQGTVDLLREAGVGERMDREGLVHDGIELRFDGR 82 (392)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCCEEEEEcCCccccccccceeEECHhHHHHHHHcCChHHHHhcCCccCcEEEEECCE
Confidence 57999999999999999999999999999987641 00 0
Q ss_pred -----C-------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEE-cCCeEEEEEeecCCCceEEEEcCEEEEeec
Q 010573 253 -----M-------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDL-SGDGVKLTLEPAAGGEKTILEADVVLVSAG 313 (507)
Q Consensus 253 -----~-------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G 313 (507)
+ ..++.+.+.+...+.|+++++++++++++. +++.+.+++. .+|+..++.+|+||-|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~a~~~gv~v~~~~~v~~i~~~~~~~~~V~~~--~~G~~~~i~ad~vVgADG 160 (392)
T PRK08243 83 RHRIDLTELTGGRAVTVYGQTEVTRDLMAARLAAGGPIRFEASDVALHDFDSDRPYVTYE--KDGEEHRLDCDFIAGCDG 160 (392)
T ss_pred EEEeccccccCCceEEEeCcHHHHHHHHHHHHhCCCeEEEeeeEEEEEecCCCceEEEEE--cCCeEEEEEeCEEEECCC
Confidence 0 012223344444567999999999999876 5566677763 233445799999999999
Q ss_pred CCCCCC
Q 010573 314 RTPFTA 319 (507)
Q Consensus 314 ~~p~~~ 319 (507)
.....-
T Consensus 161 ~~S~vR 166 (392)
T PRK08243 161 FHGVSR 166 (392)
T ss_pred CCCchh
Confidence 887653
No 351
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.80 E-value=0.00052 Score=68.91 Aligned_cols=142 Identities=25% Similarity=0.259 Sum_probs=93.3
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC---CC------------------------------------
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---SM------------------------------------ 253 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~------------------------------------ 253 (507)
..++++|||+|++|+-.|..|.+.|.++++++|.+.+.. ..
T Consensus 5 ~~~~vaIIGAG~sGL~~ar~l~~~g~~v~vfEr~~~iGGlW~y~~~~~~~~ss~Y~~l~tn~pKe~~~~~dfpf~~~~~~ 84 (448)
T KOG1399|consen 5 MSKDVAVIGAGPAGLAAARELLREGHEVVVFERTDDIGGLWKYTENVEVVHSSVYKSLRTNLPKEMMGYSDFPFPERDPR 84 (448)
T ss_pred CCCceEEECcchHHHHHHHHHHHCCCCceEEEecCCccceEeecCcccccccchhhhhhccCChhhhcCCCCCCcccCcc
Confidence 368999999999999999999999999999999877631 00
Q ss_pred ---C-HHHHHHHHHHHHhcCc--EEEcCceEEEEEEcC-CeEEEEEeecCCCceEEEEcCEEEEeecCC--CCCCCCCCc
Q 010573 254 ---D-GEIRKQFQRSLEKQKM--KFMLKTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADVVLVSAGRT--PFTAGLGLD 324 (507)
Q Consensus 254 ---d-~~~~~~~~~~l~~~Gv--~i~~~~~v~~i~~~~-~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~--p~~~~l~~~ 324 (507)
+ .++.+.++...+.-++ .+.+++.+..++... +...|...+..+. ..+..+|.|++|+|.. |+.+.. +
T Consensus 85 ~~p~~~e~~~YL~~yA~~F~l~~~i~f~~~v~~v~~~~~gkW~V~~~~~~~~-~~~~ifd~VvVctGh~~~P~~P~~--~ 161 (448)
T KOG1399|consen 85 YFPSHREVLEYLRDYAKHFDLLKMINFNTEVVRVDSIDKGKWRVTTKDNGTQ-IEEEIFDAVVVCTGHYVEPRIPQI--P 161 (448)
T ss_pred cCCCHHHHHHHHHHHHHhcChhhheEecccEEEEeeccCCceeEEEecCCcc-eeEEEeeEEEEcccCcCCCCCCcC--C
Confidence 0 1455555555555554 577788888888777 6778887643221 3678899999999977 555432 2
Q ss_pred ccCceecCCCCee-cCCCCCC---CCCCeEEecCCCCC
Q 010573 325 KIGVETDKMGRIP-VNERFAT---NIPGVYAIGDVIPG 358 (507)
Q Consensus 325 ~~gl~~~~~G~i~-Vd~~~~t---~~~~IyA~GD~a~~ 358 (507)
..+++.-. |.+. .-++... ..+.|.++|--.++
T Consensus 162 g~~~~~f~-G~~iHS~~Yk~~e~f~~k~VlVIG~g~SG 198 (448)
T KOG1399|consen 162 GPGIESFK-GKIIHSHDYKSPEKFRDKVVLVVGCGNSG 198 (448)
T ss_pred CCchhhcC-CcceehhhccCcccccCceEEEECCCccH
Confidence 21122222 3332 2222211 24678899855443
No 352
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein. This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Probab=97.80 E-value=0.00024 Score=73.20 Aligned_cols=96 Identities=16% Similarity=0.218 Sum_probs=65.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
.+++|||||+.|+.+|..|++.|.+|+|+++. .+- |. ++
T Consensus 181 ~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~-~~l---------~~----------------------------~d--- 219 (484)
T TIGR01438 181 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL---------RG----------------------------FD--- 219 (484)
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCcEEEEEec-ccc---------cc----------------------------cC---
Confidence 47999999999999999999999999999872 210 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCc-eEEEEeCeEEEccCCCCC
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGG-NTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~-~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. ...+. ...+.+.+.+++ ..++.+|.+++|+|.+|.
T Consensus 220 ---------~~~~~~l~~~L~~~gV~i~~~~~v~~v~~~~~~~~v~~~~~~~~~~i~~D~vl~a~G~~pn 280 (484)
T TIGR01438 220 ---------QDCANKVGEHMEEHGVKFKRQFVPIKVEQIEAKVKVTFTDSTNGIEEEYDTVLLAIGRDAC 280 (484)
T ss_pred ---------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEecCCcceEEEeCEEEEEecCCcC
Confidence 0111223455677799988874 33332 334455544442 247999999999999885
No 353
>TIGR01423 trypano_reduc trypanothione-disulfide reductase. Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Probab=97.79 E-value=0.00021 Score=73.43 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=65.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..+++|||||+.|+..|..+.+. |.+|+|+++.+.+... +
T Consensus 187 ~~~vvIIGgG~iG~E~A~~~~~l~~~G~~Vtli~~~~~il~~-------------------------------------~ 229 (486)
T TIGR01423 187 PRRVLTVGGGFISVEFAGIFNAYKPRGGKVTLCYRNNMILRG-------------------------------------F 229 (486)
T ss_pred CCeEEEECCCHHHHHHHHHHHHhccCCCeEEEEecCCccccc-------------------------------------c
Confidence 35799999999999999776654 8999999985543110 0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec---CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS---PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d---~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
+ ..+...+.+.+++.+|+++.+. +..+. .....+.+.++ ..+.+|.+++|+|.+|.
T Consensus 230 d------------~~~~~~l~~~L~~~GI~i~~~~~v~~i~~~~~~~~~v~~~~g--~~i~~D~vl~a~G~~Pn 289 (486)
T TIGR01423 230 D------------STLRKELTKQLRANGINIMTNENPAKVTLNADGSKHVTFESG--KTLDVDVVMMAIGRVPR 289 (486)
T ss_pred C------------HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCceEEEEEcCC--CEEEcCEEEEeeCCCcC
Confidence 0 0112223455677889988874 44443 22245555566 57999999999999985
No 354
>PRK12831 putative oxidoreductase; Provisional
Probab=97.79 E-value=7e-05 Score=76.64 Aligned_cols=95 Identities=24% Similarity=0.296 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------CC--CCH-HHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------PS--MDG-EIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~~--~d~-~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
..+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ++. ++.....+.+++.|+++++++.+..
T Consensus 138 ~~~~~V~IIG~GpAGl~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~~gv~i~~~~~v~~- 216 (464)
T PRK12831 138 KKGKKVAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGVLVYGIPEFRLPKETVVKKEIENIKKLGVKIETNVVVGK- 216 (464)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEecCCCCCCeeeecCCCccCCccHHHHHHHHHHHHcCCEEEcCCEECC-
Confidence 347899999999999999999999999999999766431 21 222 3566666778889999999886521
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecC-CCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGR-TPFT 318 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 318 (507)
.+++.+ ....+.+|.||+|+|. .|..
T Consensus 217 -------~v~~~~----~~~~~~~d~viiAtGa~~~~~ 243 (464)
T PRK12831 217 -------TVTIDE----LLEEEGFDAVFIGSGAGLPKF 243 (464)
T ss_pred -------cCCHHH----HHhccCCCEEEEeCCCCCCCC
Confidence 122210 1124569999999998 5654
No 355
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only]
Probab=97.79 E-value=0.00021 Score=70.00 Aligned_cols=97 Identities=16% Similarity=0.227 Sum_probs=75.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
...|+++|+|..|+.+|..|....++|++|++++.+ +|. .
T Consensus 213 ~~~vV~vG~G~ig~Evaa~l~~~~~~VT~V~~e~~~---------~~~--------l----------------------- 252 (478)
T KOG1336|consen 213 GGKVVCVGGGFIGMEVAAALVSKAKSVTVVFPEPWL---------LPR--------L----------------------- 252 (478)
T ss_pred CceEEEECchHHHHHHHHHHHhcCceEEEEccCccc---------hhh--------h-----------------------
Confidence 457999999999999999999999999999985421 111 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEE-Ee----cCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK-FI----SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~----d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
+...+.+.++..+++++|+++.+++. .+ +.+...|.+.+| .++.+|-||+.+|++|.
T Consensus 253 --------f~~~i~~~~~~y~e~kgVk~~~~t~~s~l~~~~~Gev~~V~l~dg--~~l~adlvv~GiG~~p~ 314 (478)
T KOG1336|consen 253 --------FGPSIGQFYEDYYENKGVKFYLGTVVSSLEGNSDGEVSEVKLKDG--KTLEADLVVVGIGIKPN 314 (478)
T ss_pred --------hhHHHHHHHHHHHHhcCeEEEEecceeecccCCCCcEEEEEeccC--CEeccCeEEEeeccccc
Confidence 01234455678899999999998753 22 345677888888 89999999999999995
No 356
>PTZ00052 thioredoxin reductase; Provisional
Probab=97.78 E-value=0.00023 Score=73.70 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=65.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
.+++|||||+.|+..|..|++.|.+|+|+++. .+... ++
T Consensus 183 ~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~-~~l~~-------------------------------------~d--- 221 (499)
T PTZ00052 183 GKTLIVGASYIGLETAGFLNELGFDVTVAVRS-IPLRG-------------------------------------FD--- 221 (499)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC-ccccc-------------------------------------CC---
Confidence 48999999999999999999999999999873 11000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+. .....+.+.+| .++.+|.|++|+|.+|.
T Consensus 222 ---------~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~~~~~v~~~~g--~~i~~D~vl~a~G~~pn 279 (499)
T PTZ00052 222 ---------RQCSEKVVEYMKEQGTLFLEGVVPINIEKMDDKIKVLFSDG--TTELFDTVLYATGRKPD 279 (499)
T ss_pred ---------HHHHHHHHHHHHHcCCEEEcCCeEEEEEEcCCeEEEEECCC--CEEEcCEEEEeeCCCCC
Confidence 0011223455677789988774 33332 23455666666 56899999999999985
No 357
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Probab=97.77 E-value=7.6e-05 Score=76.83 Aligned_cols=91 Identities=26% Similarity=0.355 Sum_probs=69.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++++|||+|+.|+.+|..|++.|.+|+++++.+++. + .+++++.....+.+++.||++++++.+..-
T Consensus 142 ~~~~V~IIGaG~aGl~aA~~L~~~g~~V~v~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~-- 219 (485)
T TIGR01317 142 TGKKVAVVGSGPAGLAAADQLNRAGHTVTVFEREDRCGGLLMYGIPNMKLDKAIVDRRIDLLSAEGIDFVTNTEIGVD-- 219 (485)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCCCceeeccCCCccCCHHHHHHHHHHHHhCCCEEECCCEeCCc--
Confidence 35799999999999999999999999999999887642 2 245667666677888899999998877410
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCC-CC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRT-PF 317 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~ 317 (507)
+.. +.....+|.|++|+|.. |.
T Consensus 220 ------~~~------~~~~~~~d~VilAtGa~~~~ 242 (485)
T TIGR01317 220 ------ISA------DELKEQFDAVVLAGGATKPR 242 (485)
T ss_pred ------cCH------HHHHhhCCEEEEccCCCCCC
Confidence 111 11235689999999998 44
No 358
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=97.76 E-value=0.00035 Score=71.39 Aligned_cols=95 Identities=22% Similarity=0.311 Sum_probs=66.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..|++.|.+|+|+++.+.+. |.. +
T Consensus 158 ~~~v~ViGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l---------~~~----------------------------~-- 198 (441)
T PRK08010 158 PGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFL---------PRE----------------------------D-- 198 (441)
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC---------CCc----------------------------C--
Confidence 3589999999999999999999999999999854321 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..++ ...+.+...++ ++.+|.+++|+|.+|.
T Consensus 199 ----------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~v~v~~~~g---~i~~D~vl~a~G~~pn 255 (441)
T PRK08010 199 ----------RDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHA---QLAVDALLIASGRQPA 255 (441)
T ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCEEEEEEcCC---eEEeCEEEEeecCCcC
Confidence 0011223455677899998773 44443 33455554443 4889999999999985
No 359
>PTZ00188 adrenodoxin reductase; Provisional
Probab=97.76 E-value=0.00013 Score=73.26 Aligned_cols=92 Identities=18% Similarity=0.169 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHH-hcCCeeEEEcccCccCC-------CCC---HHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWA-RLGSEVTVVEFAADIVP-------SMD---GEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~-~~g~~Vtlv~~~~~~~~-------~~d---~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
..+++|+|||+|+.|+.+|..+. +.|.+|+++++.+.+.. ... +.+...+.+.+...+++++.+..+-.
T Consensus 37 ~~~krVAIVGaGPAGlyaA~~Ll~~~g~~VtlfEk~p~pgGLvR~GVaPdh~~~k~v~~~f~~~~~~~~v~f~gnv~VG~ 116 (506)
T PTZ00188 37 AKPFKVGIIGAGPSALYCCKHLLKHERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGV 116 (506)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhcCCeEEEEecCCCCccEEEEeCCCCCccHHHHHHHHHHHHhhCCeEEEeeeEecC
Confidence 35789999999999999999764 67999999999987631 111 24445555556667888875443321
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.++++ .-.-.+|.||+|+|..+.
T Consensus 117 --------Dvt~e------eL~~~YDAVIlAtGA~~l 139 (506)
T PTZ00188 117 --------DLKME------ELRNHYNCVIFCCGASEV 139 (506)
T ss_pred --------ccCHH------HHHhcCCEEEEEcCCCCC
Confidence 11111 112368999999998864
No 360
>PTZ00058 glutathione reductase; Provisional
Probab=97.76 E-value=0.00034 Score=72.93 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=66.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..+++.|.+|+|+++.+.+... ++
T Consensus 237 pk~VvIIGgG~iGlE~A~~l~~~G~~Vtli~~~~~il~~-------------------------------------~d-- 277 (561)
T PTZ00058 237 AKRIGIAGSGYIAVELINVVNRLGAESYIFARGNRLLRK-------------------------------------FD-- 277 (561)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCcEEEEEeccccccc-------------------------------------CC--
Confidence 468999999999999999999999999999985432100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCC---EEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPS---EVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~---~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..++.. .+.+...++ ..++.+|.|++|+|.+|.
T Consensus 278 ----------~~i~~~l~~~L~~~GV~i~~~~~V~~I~~~~~~~v~v~~~~~-~~~i~aD~VlvA~Gr~Pn 337 (561)
T PTZ00058 278 ----------ETIINELENDMKKNNINIITHANVEEIEKVKEKNLTIYLSDG-RKYEHFDYVIYCVGRSPN 337 (561)
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEecCCCcEEEEECCC-CEEEECCEEEECcCCCCC
Confidence 0011222345667789988774 4444322 234433333 257999999999999885
No 361
>PRK14727 putative mercuric reductase; Provisional
Probab=97.75 E-value=0.00036 Score=72.02 Aligned_cols=93 Identities=18% Similarity=0.283 Sum_probs=64.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
.+++|||+|+.|+..|..|++.|.+|+|+++...+ |. ..
T Consensus 189 k~vvVIGgG~iG~E~A~~l~~~G~~Vtlv~~~~~l----------~~----~d--------------------------- 227 (479)
T PRK14727 189 ASLTVIGSSVVAAEIAQAYARLGSRVTILARSTLL----------FR----ED--------------------------- 227 (479)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCC----------Cc----ch---------------------------
Confidence 58999999999999999999999999999873211 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+ +...+.+...++ ++.+|.+|+|+|..|.
T Consensus 228 ---------~~~~~~l~~~L~~~GV~i~~~~~V~~i~~~~~~~~v~~~~g---~i~aD~VlvA~G~~pn 284 (479)
T PRK14727 228 ---------PLLGETLTACFEKEGIEVLNNTQASLVEHDDNGFVLTTGHG---ELRAEKLLISTGRHAN 284 (479)
T ss_pred ---------HHHHHHHHHHHHhCCCEEEcCcEEEEEEEeCCEEEEEEcCC---eEEeCEEEEccCCCCC
Confidence 0111223455677889988763 4333 234455555444 5889999999999985
No 362
>PRK09897 hypothetical protein; Provisional
Probab=97.75 E-value=0.00045 Score=71.26 Aligned_cols=99 Identities=17% Similarity=0.231 Sum_probs=69.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCccCCC-----CC------------------HHH------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIVPS-----MD------------------GEI------------ 257 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~~~-----~d------------------~~~------------ 257 (507)
++|+|||+|+.|+-++..|.+.+. +|++++++..+... -+ +.+
T Consensus 2 ~~IAIIGgGp~Gl~~a~~L~~~~~~l~V~lfEp~~~~G~G~ays~~~~~~~L~~N~~~~~~p~~~~~f~~Wl~~~~~~~~ 81 (534)
T PRK09897 2 KKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSHL 81 (534)
T ss_pred CeEEEECCcHHHHHHHHHHHhcCCCCcEEEEecCCCCCcceeecCCCChHHHHhcccccccCCChHHHHHHhhhhhHHHH
Confidence 579999999999999999987654 78999876543210 00 001
Q ss_pred -------------------------H---HHHHHHHHhcC--cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCE
Q 010573 258 -------------------------R---KQFQRSLEKQK--MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADV 307 (507)
Q Consensus 258 -------------------------~---~~~~~~l~~~G--v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~ 307 (507)
. +.+.+.+.+.| +.++.+++|+.++.+++++.+++.+ ++..+.+|.
T Consensus 82 ~~~g~~~~~l~~~~f~PR~l~G~YL~~~f~~l~~~a~~~G~~V~v~~~~~V~~I~~~~~g~~V~t~~----gg~~i~aD~ 157 (534)
T PRK09897 82 QRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQ----DLPSETFDL 157 (534)
T ss_pred HhcCCcceeecCCccCCeecchHHHHHHHHHHHHHHHHcCCeEEEEECCEEEEEEEeCCEEEEEECC----CCeEEEcCE
Confidence 1 11123333455 7788889999998888887776531 346799999
Q ss_pred EEEeecCCCC
Q 010573 308 VLVSAGRTPF 317 (507)
Q Consensus 308 vi~a~G~~p~ 317 (507)
||+|+|..+.
T Consensus 158 VVLAtGh~~p 167 (534)
T PRK09897 158 AVIATGHVWP 167 (534)
T ss_pred EEECCCCCCC
Confidence 9999997654
No 363
>PRK07045 putative monooxygenase; Reviewed
Probab=97.73 E-value=0.00038 Score=69.85 Aligned_cols=99 Identities=20% Similarity=0.378 Sum_probs=72.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC--C---CC-----------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP--S---MD----------------------------------- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~---~d----------------------------------- 254 (507)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. . +.
T Consensus 6 ~~V~IiGgGpaGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~l~~~~~~~L~~lGl~~~~~~~~~~~~~~~~~~~~g~~ 85 (388)
T PRK07045 6 VDVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLRRDAMRLYHDKEL 85 (388)
T ss_pred eEEEEECCcHHHHHHHHHHHhcCCcEEEEeCCCcccCCCcccccCccHHHHHHHcCCHHHHHhcccccccceEEecCCcE
Confidence 4799999999999999999999999999997764310 0 00
Q ss_pred --------------------HHHHHHHHHHHH-hcCcEEEcCceEEEEEEcCCeE--EEEEeecCCCceEEEEcCEEEEe
Q 010573 255 --------------------GEIRKQFQRSLE-KQKMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVS 311 (507)
Q Consensus 255 --------------------~~~~~~~~~~l~-~~Gv~i~~~~~v~~i~~~~~~v--~v~~~~~~~g~~~~i~~D~vi~a 311 (507)
.++.+.+.+.+. ..|++++++++++.++.++++. .+++. +++++.+|.||.|
T Consensus 86 ~~~~~~~~~~~~g~~~~i~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~-----~g~~~~~~~vIgA 160 (388)
T PRK07045 86 IASLDYRSASALGYFILIPCEQLRRLLLAKLDGLPNVRLRFETSIERIERDADGTVTSVTLS-----DGERVAPTVLVGA 160 (388)
T ss_pred EEEecCCccccCCceEEccHHHHHHHHHHHHhcCCCeeEEeCCEEEEEEECCCCcEEEEEeC-----CCCEEECCEEEEC
Confidence 012233333443 3579999999999998766553 45543 4468999999999
Q ss_pred ecCCCCC
Q 010573 312 AGRTPFT 318 (507)
Q Consensus 312 ~G~~p~~ 318 (507)
.|.....
T Consensus 161 DG~~S~v 167 (388)
T PRK07045 161 DGARSMI 167 (388)
T ss_pred CCCChHH
Confidence 9987654
No 364
>TIGR02023 BchP-ChlP geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).
Probab=97.73 E-value=0.00058 Score=68.51 Aligned_cols=102 Identities=28% Similarity=0.391 Sum_probs=72.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEccc-CccC-----------CCC------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFA-ADIV-----------PSM------------------------------ 253 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~~-----------~~~------------------------------ 253 (507)
.|+|||+|+.|+-+|..|++.|.+|.++++. +... ..+
T Consensus 2 DVvIVGaGpAG~~aA~~La~~G~~V~l~E~~~~~~~~cg~~i~~~~l~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
T TIGR02023 2 DVAVIGGGPSGATAAETLARAGIETILLERALSNIKPCGGAIPPCLIEEFDIPDSLIDRRVTQMRMISPSRVPIKVTIPS 81 (388)
T ss_pred eEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCcCcCcCCcCHhhhhhcCCchHHHhhhcceeEEEcCCCceeeeccCC
Confidence 5899999999999999999999999999986 2210 000
Q ss_pred --------C-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeec---CCCceEEEEcCEEEEeecCCCCC
Q 010573 254 --------D-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPA---AGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 254 --------d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+ ..+.+.+.+...+.|++++.. .++++..+++++.+++.+. .++...++.+|.||.|.|.....
T Consensus 82 ~~~~~~~~~r~~fd~~L~~~a~~~G~~v~~~-~v~~v~~~~~~~~v~~~~~~~~~~~~~~~i~a~~VI~AdG~~S~v 157 (388)
T TIGR02023 82 EDGYVGMVRREVFDSYLRERAQKAGAELIHG-LFLKLERDRDGVTLTYRTPKKGAGGEKGSVEADVVIGADGANSPV 157 (388)
T ss_pred CCCceEeeeHHHHHHHHHHHHHhCCCEEEee-EEEEEEEcCCeEEEEEEeccccCCCcceEEEeCEEEECCCCCcHH
Confidence 0 112234455556679999754 6888887777777776531 12234579999999999976543
No 365
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=97.72 E-value=0.00038 Score=69.89 Aligned_cols=98 Identities=22% Similarity=0.307 Sum_probs=71.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC----CCC------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----SMD------------------------------------ 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----~~d------------------------------------ 254 (507)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .+.
T Consensus 8 ~dViIVGaG~~Gl~~A~~L~~~G~~v~liE~~~~~~~~r~~~l~~~s~~~l~~lgl~~~~~~~~~~~~~~~~~~~~g~~~ 87 (388)
T PRK07494 8 TDIAVIGGGPAGLAAAIALARAGASVALVAPEPPYADLRTTALLGPSIRFLERLGLWARLAPHAAPLQSMRIVDATGRLI 87 (388)
T ss_pred CCEEEECcCHHHHHHHHHHhcCCCeEEEEeCCCCCCCcchhhCcHHHHHHHHHhCchhhhHhhcceeeEEEEEeCCCCCC
Confidence 4699999999999999999999999999998643210 000
Q ss_pred -----------------------HHHHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEE
Q 010573 255 -----------------------GEIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLV 310 (507)
Q Consensus 255 -----------------------~~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~ 310 (507)
..+.+.+.+.+.+. ++. +.+++++.++.+++++.+++. +++++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~i~~~~l~~~L~~~~~~~~~~~-~~~~~v~~i~~~~~~~~v~~~-----~g~~~~a~~vI~ 161 (388)
T PRK07494 88 RAPEVRFRAAEIGEDAFGYNIPNWLLNRALEARVAELPNIT-RFGDEAESVRPREDEVTVTLA-----DGTTLSARLVVG 161 (388)
T ss_pred CCceEEEcHHhcCCCccEEEeEhHHHHHHHHHHHhcCCCcE-EECCeeEEEEEcCCeEEEEEC-----CCCEEEEeEEEE
Confidence 01223334444444 455 778999999877888877764 456899999999
Q ss_pred eecCCCCC
Q 010573 311 SAGRTPFT 318 (507)
Q Consensus 311 a~G~~p~~ 318 (507)
|.|.....
T Consensus 162 AdG~~S~v 169 (388)
T PRK07494 162 ADGRNSPV 169 (388)
T ss_pred ecCCCchh
Confidence 99987643
No 366
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Probab=97.71 E-value=9.3e-05 Score=82.40 Aligned_cols=93 Identities=20% Similarity=0.235 Sum_probs=69.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS 284 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~ 284 (507)
+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | .+++++.....+.+++.||++++++.+.
T Consensus 430 ~~kVaIIG~GPAGLsaA~~La~~G~~VtV~E~~~~~GG~l~~gip~~rl~~e~~~~~~~~l~~~Gv~~~~~~~vg----- 504 (1006)
T PRK12775 430 LGKVAICGSGPAGLAAAADLVKYGVDVTVYEALHVVGGVLQYGIPSFRLPRDIIDREVQRLVDIGVKIETNKVIG----- 504 (1006)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCcceeeccCCccCCCHHHHHHHHHHHHHCCCEEEeCCccC-----
Confidence 5799999999999999999999999999999876542 2 2356777778888999999999886541
Q ss_pred CCeEEEEEeecCCCceEEEEcCEEEEeecCC-CCC
Q 010573 285 GDGVKLTLEPAAGGEKTILEADVVLVSAGRT-PFT 318 (507)
Q Consensus 285 ~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~ 318 (507)
. .+++... .....+|.||+|+|.. |..
T Consensus 505 -~--~~~~~~l----~~~~~yDaViIATGa~~pr~ 532 (1006)
T PRK12775 505 -K--TFTVPQL----MNDKGFDAVFLGVGAGAPTF 532 (1006)
T ss_pred -C--ccCHHHH----hhccCCCEEEEecCCCCCCC
Confidence 1 1222110 0124589999999984 544
No 367
>PLN02697 lycopene epsilon cyclase
Probab=97.70 E-value=0.0005 Score=70.96 Aligned_cols=97 Identities=22% Similarity=0.374 Sum_probs=69.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC----------C-------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS----------M------------------------------- 253 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~------------------------------- 253 (507)
-.|+|||+|+.|+-+|..+++.|.+|.++++...+... +
T Consensus 109 ~DVvIVGaGPAGLalA~~Lak~Gl~V~LIe~~~p~~~n~GvW~~~l~~lgl~~~i~~~w~~~~v~~~~~~~~~~~~~Yg~ 188 (529)
T PLN02697 109 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFKDLGLEDCIEHVWRDTIVYLDDDKPIMIGRAYGR 188 (529)
T ss_pred ccEEEECcCHHHHHHHHHHHhCCCcEEEecCcccCCCccccchhHHHhcCcHHHHHhhcCCcEEEecCCceeeccCcccE
Confidence 46999999999999999999999999999864322110 0
Q ss_pred -C-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 254 -D-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 254 -d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+ ..+.+.+.+.+.+.|+++ .++.|+++..+++++.+.... ++.++.++.||.|+|..+
T Consensus 189 V~R~~L~~~Ll~~a~~~GV~~-~~~~V~~I~~~~~~~~vv~~~----dG~~i~A~lVI~AdG~~S 248 (529)
T PLN02697 189 VSRTLLHEELLRRCVESGVSY-LSSKVDRITEASDGLRLVACE----DGRVIPCRLATVASGAAS 248 (529)
T ss_pred EcHHHHHHHHHHHHHhcCCEE-EeeEEEEEEEcCCcEEEEEEc----CCcEEECCEEEECCCcCh
Confidence 0 122244555556679998 578999987766665533221 456899999999999877
No 368
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.
Probab=97.69 E-value=4.5e-05 Score=78.34 Aligned_cols=40 Identities=25% Similarity=0.474 Sum_probs=37.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
+|+|||||.+|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 1 ~v~IiG~G~aGl~aA~~L~~~G~~v~v~E~~~~~GG~~~~ 40 (474)
T TIGR02732 1 KVAIVGAGLAGLSTAVELVDAGHEVDIYESRSFIGGKVGS 40 (474)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecCCCCceeee
Confidence 5899999999999999999999999999999999997643
No 369
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=97.68 E-value=0.00012 Score=79.91 Aligned_cols=93 Identities=29% Similarity=0.334 Sum_probs=69.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | .++.++.....+.+++.||+++.++.+.
T Consensus 430 ~~~~V~IIGaGpAGl~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~rlp~~~~~~~~~~l~~~gv~~~~~~~v~---- 505 (752)
T PRK12778 430 NGKKVAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGGVLKYGIPEFRLPKKIVDVEIENLKKLGVKFETDVIVG---- 505 (752)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEC----
Confidence 36799999999999999999999999999999865431 2 2355666666677888999999887651
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecC-CCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGR-TPFT 318 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 318 (507)
. .++++ +.....+|.||+|+|. .|..
T Consensus 506 --~--~v~~~-----~l~~~~ydavvlAtGa~~~~~ 532 (752)
T PRK12778 506 --K--TITIE-----ELEEEGFKGIFIASGAGLPNF 532 (752)
T ss_pred --C--cCCHH-----HHhhcCCCEEEEeCCCCCCCC
Confidence 1 12222 2234568999999998 4654
No 370
>PRK06996 hypothetical protein; Provisional
Probab=97.67 E-value=0.00053 Score=69.05 Aligned_cols=100 Identities=18% Similarity=0.350 Sum_probs=75.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC----CeeEEEcccCccCCC------------------C------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG----SEVTVVEFAADIVPS------------------M------------------ 253 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g----~~Vtlv~~~~~~~~~------------------~------------------ 253 (507)
...|+|||+|+.|+-+|..|++.| .+|+++++.+..-.. +
T Consensus 11 ~~dv~IvGgGpaG~~~A~~L~~~g~~~g~~v~l~e~~~~~~~~~~~r~~~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~ 90 (398)
T PRK06996 11 DFDIAIVGAGPVGLALAGWLARRSATRALSIALIDAREPAASANDPRAIALSHGSRVLLETLGAWPADATPIEHIHVSQR 90 (398)
T ss_pred CCCEEEECcCHHHHHHHHHHhcCCCcCCceEEEecCCCCCcCCCCceEEEecHHHHHHHHhCCCchhcCCcccEEEEecC
Confidence 357999999999999999999987 479999976421000 0
Q ss_pred ---------------C--------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEE
Q 010573 254 ---------------D--------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLV 310 (507)
Q Consensus 254 ---------------d--------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~ 310 (507)
+ ..+.+.+.+.+++.|++++.++++++++.+++++++++.+. + .++++.+|+||.
T Consensus 91 ~~~g~~~~~~~~~~~~~~g~~v~r~~l~~~L~~~~~~~g~~~~~~~~v~~~~~~~~~v~v~~~~~-~-g~~~i~a~lvIg 168 (398)
T PRK06996 91 GHFGRTLIDRDDHDVPALGYVVRYGSLVAALARAVRGTPVRWLTSTTAHAPAQDADGVTLALGTP-Q-GARTLRARIAVQ 168 (398)
T ss_pred CCCceEEecccccCCCcCEEEEEhHHHHHHHHHHHHhCCCEEEcCCeeeeeeecCCeEEEEECCC-C-cceEEeeeEEEE
Confidence 0 24556667777888999999999999988888888887521 1 126899999999
Q ss_pred eecCC
Q 010573 311 SAGRT 315 (507)
Q Consensus 311 a~G~~ 315 (507)
|.|..
T Consensus 169 ADG~~ 173 (398)
T PRK06996 169 AEGGL 173 (398)
T ss_pred CCCCC
Confidence 99953
No 371
>PLN02612 phytoene desaturase
Probab=97.67 E-value=6.9e-05 Score=78.63 Aligned_cols=44 Identities=32% Similarity=0.441 Sum_probs=39.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
.....+|+|||||++|++||++|++.|++|+|+|+++.+||.+.
T Consensus 90 ~~~~~~v~iiG~G~~Gl~~a~~l~~~g~~~~~~e~~~~~gG~~~ 133 (567)
T PLN02612 90 PAKPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVA 133 (567)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhcCCeEEEEecCCCCCCcce
Confidence 33457999999999999999999999999999999999999754
No 372
>PRK13748 putative mercuric reductase; Provisional
Probab=97.66 E-value=0.00047 Score=72.83 Aligned_cols=95 Identities=17% Similarity=0.274 Sum_probs=65.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..|++.|.+|+||++...+ |. ..
T Consensus 270 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtli~~~~~l----------~~----~d-------------------------- 309 (561)
T PRK13748 270 PERLAVIGSSVVALELAQAFARLGSKVTILARSTLF----------FR----ED-------------------------- 309 (561)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCccc----------cc----cC--------------------------
Confidence 358999999999999999999999999999873211 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+|+++.+. +..+. ...+.+.+.++ .+.+|.+++|+|.+|..
T Consensus 310 ----------~~~~~~l~~~l~~~gI~i~~~~~v~~i~~~~~~~~v~~~~~---~i~~D~vi~a~G~~pn~ 367 (561)
T PRK13748 310 ----------PAIGEAVTAAFRAEGIEVLEHTQASQVAHVDGEFVLTTGHG---ELRADKLLVATGRAPNT 367 (561)
T ss_pred ----------HHHHHHHHHHHHHCCCEEEcCCEEEEEEecCCEEEEEecCC---eEEeCEEEEccCCCcCC
Confidence 0011223455677889988763 44442 33444544443 58999999999999863
No 373
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=97.66 E-value=0.00015 Score=74.61 Aligned_cols=90 Identities=30% Similarity=0.406 Sum_probs=68.3
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .++.++.....+.+.+.|+++++++.+..-
T Consensus 142 ~~~~VvIIGaGpAGl~aA~~l~~~G~~V~vie~~~~~GG~l~~gip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~-- 219 (471)
T PRK12810 142 TGKKVAVVGSGPAGLAAADQLARAGHKVTVFERADRIGGLLRYGIPDFKLEKEVIDRRIELMEAEGIEFRTNVEVGKD-- 219 (471)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCceeeecCCcccCCHHHHHHHHHHHHhCCcEEEeCCEECCc--
Confidence 46899999999999999999999999999999877652 1 235566666667788899999988866310
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.. +.....+|.|++|+|..+
T Consensus 220 ------~~~------~~~~~~~d~vvlAtGa~~ 240 (471)
T PRK12810 220 ------ITA------EELLAEYDAVFLGTGAYK 240 (471)
T ss_pred ------CCH------HHHHhhCCEEEEecCCCC
Confidence 111 112357899999999973
No 374
>TIGR01790 carotene-cycl lycopene cyclase family protein. This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Probab=97.65 E-value=0.00058 Score=68.58 Aligned_cols=95 Identities=19% Similarity=0.265 Sum_probs=68.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-----C----C---------------------C-----------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----S----M---------------------D----------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----~----~---------------------d----------- 254 (507)
.|+|||+|+.|+-+|..+++.|.+|+++++.+.+.. . + +
T Consensus 1 DviIiGaG~AGl~~A~~la~~g~~v~liE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (388)
T TIGR01790 1 DLAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHTYGVWDDDLSDLGLADCVEHVWPDVYEYRFPKQPRKLGTAYG 80 (388)
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEccCCCCCCCccccccHhhhhhhchhhHHhhcCCCceEEecCCcchhcCCcee
Confidence 389999999999999999999999999997653210 0 0 0
Q ss_pred ----HHHHHHHHHHHHhcCcEEEcCceEEEEEEc-CCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 ----GEIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ----~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+.+.+.+.+.+.|++++ ...++.++.+ ++.+.+++. ++.++.++.||.|+|..+
T Consensus 81 ~i~~~~l~~~l~~~~~~~gv~~~-~~~v~~i~~~~~~~~~v~~~-----~g~~~~a~~VI~A~G~~s 141 (388)
T TIGR01790 81 SVDSTRLHEELLQKCPEGGVLWL-ERKAIHAEADGVALSTVYCA-----GGQRIQARLVIDARGFGP 141 (388)
T ss_pred EEcHHHHHHHHHHHHHhcCcEEE-ccEEEEEEecCCceeEEEeC-----CCCEEEeCEEEECCCCch
Confidence 1233444555566788886 5578887665 445556653 446899999999999887
No 375
>PLN02487 zeta-carotene desaturase
Probab=97.64 E-value=8e-05 Score=77.45 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=38.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
.+++|+|||||++|+++|+.|++.|++|+|+|+.+.+||.+.
T Consensus 74 ~~~~v~iiG~G~~Gl~~a~~L~~~g~~v~i~E~~~~~gG~~~ 115 (569)
T PLN02487 74 PKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVG 115 (569)
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeeEEEecCCCCCCcee
Confidence 446999999999999999999999999999999999998653
No 376
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism]
Probab=97.64 E-value=0.001 Score=71.20 Aligned_cols=92 Identities=24% Similarity=0.386 Sum_probs=74.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS 284 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~ 284 (507)
+++|.|||+|+.|+-+|..|.+.|..|++.+|.++.. | .+|+.+.+.-.+.|.+.||+|++|+.|-+-
T Consensus 1785 g~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~ygipnmkldk~vv~rrv~ll~~egi~f~tn~eigk~--- 1861 (2142)
T KOG0399|consen 1785 GKRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMYGIPNMKLDKFVVQRRVDLLEQEGIRFVTNTEIGKH--- 1861 (2142)
T ss_pred CcEEEEEccCchhhhHHHHHhhcCcEEEEEEecCCcCceeeecCCccchhHHHHHHHHHHHHhhCceEEeecccccc---
Confidence 7899999999999999999999999999999999863 2 467778887788899999999999876321
Q ss_pred CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 285 GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 285 ~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+.+ +.-.-+-|.||+|+|..-..+
T Consensus 1862 -----vs~------d~l~~~~daiv~a~gst~prd 1885 (2142)
T KOG0399|consen 1862 -----VSL------DELKKENDAIVLATGSTTPRD 1885 (2142)
T ss_pred -----ccH------HHHhhccCeEEEEeCCCCCcC
Confidence 222 334456799999999765443
No 377
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
Probab=97.63 E-value=0.0008 Score=67.62 Aligned_cols=98 Identities=24% Similarity=0.330 Sum_probs=76.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-C-----------------CCC-----------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-P-----------------SMD----------------------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~-----------------~~d----------------------- 254 (507)
.|+|||+|+.|.-+|..+++.|.+|.++++...+. + .+.
T Consensus 5 DVvIVGaGPAGs~aA~~la~~G~~VlvlEk~~~~G~k~~~~~~~~~~~l~~l~~~~~~~i~~~v~~~~~~~~~~~~~~~~ 84 (396)
T COG0644 5 DVVIVGAGPAGSSAARRLAKAGLDVLVLEKGSEPGAKPCCGGGLSPRALEELIPDFDEEIERKVTGARIYFPGEKVAIEV 84 (396)
T ss_pred eEEEECCchHHHHHHHHHHHcCCeEEEEecCCCCCCCccccceechhhHHHhCCCcchhhheeeeeeEEEecCCceEEec
Confidence 58999999999999999999999999999876542 1 010
Q ss_pred ----------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 ----------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 ----------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+-+++.+..++.|.+++.+++++.+..+++++.+.+.. ...++.++.||.|.|....
T Consensus 85 ~~~~~y~v~R~~fd~~La~~A~~aGae~~~~~~~~~~~~~~~~~~~~~~~----~~~e~~a~~vI~AdG~~s~ 153 (396)
T COG0644 85 PVGEGYIVDRAKFDKWLAERAEEAGAELYPGTRVTGVIREDDGVVVGVRA----GDDEVRAKVVIDADGVNSA 153 (396)
T ss_pred CCCceEEEEhHHhhHHHHHHHHHcCCEEEeceEEEEEEEeCCcEEEEEEc----CCEEEEcCEEEECCCcchH
Confidence 1233456667778899999999999999888777665542 2268999999999996654
No 378
>PLN02546 glutathione reductase
Probab=97.63 E-value=0.0007 Score=70.63 Aligned_cols=97 Identities=15% Similarity=0.153 Sum_probs=65.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..|++.|.+|+|+++.+.+... ++
T Consensus 252 ~k~V~VIGgG~iGvE~A~~L~~~g~~Vtlv~~~~~il~~-------------------------------------~d-- 292 (558)
T PLN02546 252 PEKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQKKVLRG-------------------------------------FD-- 292 (558)
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeccccccc-------------------------------------cC--
Confidence 458999999999999999999999999999985432110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec---CCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS---PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d---~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+|+++.+. +..+. ...+.+.+.++ ....+|.+++|+|.+|..
T Consensus 293 ----------~~~~~~l~~~L~~~GV~i~~~~~v~~i~~~~~g~v~v~~~~g--~~~~~D~Viva~G~~Pnt 352 (558)
T PLN02546 293 ----------EEVRDFVAEQMSLRGIEFHTEESPQAIIKSADGSLSLKTNKG--TVEGFSHVMFATGRKPNT 352 (558)
T ss_pred ----------HHHHHHHHHHHHHCCcEEEeCCEEEEEEEcCCCEEEEEECCe--EEEecCEEEEeeccccCC
Confidence 0111223455677899998774 33332 33344544433 445589999999999853
No 379
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.63 E-value=0.00074 Score=67.98 Aligned_cols=99 Identities=19% Similarity=0.402 Sum_probs=71.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc---CCeeEEEcccC-cc--CCC-------C--------------C-------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL---GSEVTVVEFAA-DI--VPS-------M--------------D------------- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~-~~--~~~-------~--------------d------------- 254 (507)
-+|+|||+|+.|+-+|..|++. |.+|+++++.. .. .+. + +
T Consensus 4 ~dv~IvGaG~aGl~~A~~L~~~~~~G~~v~v~E~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~ 83 (395)
T PRK05732 4 MDVIIVGGGMAGATLALALSRLSHGGLPVALIEAFAPESDAHPGFDARAIALAAGTCQQLARLGVWQALADCATPITHIH 83 (395)
T ss_pred CCEEEECcCHHHHHHHHHhhhcccCCCEEEEEeCCCcccccCCCCCccceeccHHHHHHHHHCCChhhhHhhcCCccEEE
Confidence 3699999999999999999998 99999999841 10 000 0 0
Q ss_pred ----------------------------HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEc
Q 010573 255 ----------------------------GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEA 305 (507)
Q Consensus 255 ----------------------------~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~ 305 (507)
..+.+.+.+.+.+ .|++++.+++++++..+++++.+++. ++..+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~~~v~~i~~~~~~~~v~~~-----~g~~~~a 158 (395)
T PRK05732 84 VSDRGHAGFVRLDAEDYGVPALGYVVELHDVGQRLFALLDKAPGVTLHCPARVANVERTQGSVRVTLD-----DGETLTG 158 (395)
T ss_pred EecCCCCceEEeehhhcCCCccEEEEEhHHHHHHHHHHHhcCCCcEEEcCCEEEEEEEcCCeEEEEEC-----CCCEEEe
Confidence 0111223333433 47999999999999877777777764 3457999
Q ss_pred CEEEEeecCCCCC
Q 010573 306 DVVLVSAGRTPFT 318 (507)
Q Consensus 306 D~vi~a~G~~p~~ 318 (507)
|.||.|.|.....
T Consensus 159 ~~vI~AdG~~S~v 171 (395)
T PRK05732 159 RLLVAADGSHSAL 171 (395)
T ss_pred CEEEEecCCChhh
Confidence 9999999987653
No 380
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=97.62 E-value=0.00014 Score=77.75 Aligned_cols=91 Identities=27% Similarity=0.329 Sum_probs=68.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .++.++.+...+.+++.|+++++++.+..
T Consensus 192 ~~k~VaIIGaGpAGl~aA~~La~~G~~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~--- 268 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGR--- 268 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccC---
Confidence 46899999999999999999999999999999877641 2 23556666667778889999998875421
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+++. + ....+|.|++|+|..+.
T Consensus 269 -----dv~~~-----~-~~~~~DaVilAtGa~~~ 291 (652)
T PRK12814 269 -----DITLE-----E-LQKEFDAVLLAVGAQKA 291 (652)
T ss_pred -----ccCHH-----H-HHhhcCEEEEEcCCCCC
Confidence 11111 1 12348999999998764
No 381
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.0019 Score=65.64 Aligned_cols=137 Identities=25% Similarity=0.335 Sum_probs=85.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCe-eEEEcccCccCC------------------------CCC--------HHHHHH
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAADIVP------------------------SMD--------GEIRKQ 260 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~~~------------------------~~d--------~~~~~~ 260 (507)
..+|+|||+|.+|+-+|..|.+.|.. +.++++++.+.. .+. .++...
T Consensus 8 ~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg~W~~~ry~~l~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~y 87 (443)
T COG2072 8 HTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGGTWRYNRYPGLRLDSPKWLLGFPFLPFRWDEAFAPFAEIKDY 87 (443)
T ss_pred cccEEEECCCHHHHHHHHHHHHcCCCcEEEEEccCCcCCcchhccCCceEECCchheeccCCCccCCcccCCCcccHHHH
Confidence 35799999999999999999999998 999998864420 010 136677
Q ss_pred HHHHHHhcCcE--EEcCceEEEEEEcC--CeEEEEEeecCCCceEEEEcCEEEEeecCC--CCCCCCCCcccCceecCCC
Q 010573 261 FQRSLEKQKMK--FMLKTKVVGVDLSG--DGVKLTLEPAAGGEKTILEADVVLVSAGRT--PFTAGLGLDKIGVETDKMG 334 (507)
Q Consensus 261 ~~~~l~~~Gv~--i~~~~~v~~i~~~~--~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~--p~~~~l~~~~~gl~~~~~G 334 (507)
+...+++.++. +..++.|+.+..++ +...|++.+ ++..+ +.+|.||+|+|.- |+.+. -.|++.- .|
T Consensus 88 ~~~~~~~y~~~~~i~~~~~v~~~~~~~~~~~w~V~~~~--~~~~~-~~a~~vV~ATG~~~~P~iP~----~~G~~~f-~g 159 (443)
T COG2072 88 IKDYLEKYGLRFQIRFNTRVEVADWDEDTKRWTVTTSD--GGTGE-LTADFVVVATGHLSEPYIPD----FAGLDEF-KG 159 (443)
T ss_pred HHHHHHHcCceeEEEcccceEEEEecCCCCeEEEEEcC--CCeee-EecCEEEEeecCCCCCCCCC----CCCccCC-Cc
Confidence 77778776654 33445565555554 355666542 11222 7899999999962 22221 1233321 23
Q ss_pred CeecC----CCCCCCCCCeEEecCCCCC
Q 010573 335 RIPVN----ERFATNIPGVYAIGDVIPG 358 (507)
Q Consensus 335 ~i~Vd----~~~~t~~~~IyA~GD~a~~ 358 (507)
.+.-. +...-.-++|-+||--++.
T Consensus 160 ~~~HS~~~~~~~~~~GKrV~VIG~GaSA 187 (443)
T COG2072 160 RILHSADWPNPEDLRGKRVLVIGAGASA 187 (443)
T ss_pred eEEchhcCCCccccCCCeEEEECCCccH
Confidence 33321 1123355789999966643
No 382
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.60 E-value=0.00017 Score=77.03 Aligned_cols=91 Identities=26% Similarity=0.403 Sum_probs=70.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+..|..|++.|.+|+++++.+.+. + .+++++.....+.+++.|+++++++.+..
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~--- 385 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGR--- 385 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCC---
Confidence 47999999999999999999999999999999887642 1 35677777677888899999999887631
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+.+. .....+|.|++|+|..+.
T Consensus 386 -----~~~~~------~l~~~~DaV~latGa~~~ 408 (639)
T PRK12809 386 -----DITFS------DLTSEYDAVFIGVGTYGM 408 (639)
T ss_pred -----cCCHH------HHHhcCCEEEEeCCCCCC
Confidence 11111 123468999999998754
No 383
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=97.59 E-value=0.0002 Score=78.61 Aligned_cols=90 Identities=27% Similarity=0.272 Sum_probs=65.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS 284 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~ 284 (507)
+++|+|||||+.|+.+|..|++.|.+|+++++.+.+. | .++.+......+.+.+.||+++++....
T Consensus 537 ~kkVaIIGGGPAGLSAA~~LAr~G~~VTV~Ek~~~lGG~l~~~IP~~rlp~e~l~~~ie~l~~~GVe~~~g~~~d----- 611 (1012)
T TIGR03315 537 AHKVAVIGAGPAGLSAGYFLARAGHPVTVFEKKEKPGGVVKNIIPEFRISAESIQKDIELVKFHGVEFKYGCSPD----- 611 (1012)
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEecccccCceeeecccccCCCHHHHHHHHHHHHhcCcEEEEecccc-----
Confidence 5799999999999999999999999999999876542 1 2344555555567778899998774210
Q ss_pred CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 285 GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 285 ~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+.+. +.....+|.|++|+|.++..
T Consensus 612 -----~~ve-----~l~~~gYDaVIIATGA~~~~ 635 (1012)
T TIGR03315 612 -----LTVA-----ELKNQGYKYVILAIGAWKHG 635 (1012)
T ss_pred -----eEhh-----hhhcccccEEEECCCCCCCC
Confidence 1111 12345689999999988643
No 384
>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism]
Probab=97.57 E-value=0.0001 Score=72.17 Aligned_cols=43 Identities=26% Similarity=0.485 Sum_probs=37.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~GG~~~~ 84 (507)
...+|||||||.||++||.+|.+.| .+++|+|..+++||....
T Consensus 20 ~~~kIvIIGAG~AGLaAA~rLle~gf~~~~IlEa~dRIGGRI~t 63 (498)
T KOG0685|consen 20 GNAKIVIIGAGIAGLAAATRLLENGFIDVLILEASDRIGGRIHT 63 (498)
T ss_pred CCceEEEECCchHHHHHHHHHHHhCCceEEEEEeccccCceEee
Confidence 3458999999999999999999776 579999999999998654
No 385
>KOG2853 consensus Possible oxidoreductase [General function prediction only]
Probab=97.56 E-value=0.00048 Score=64.33 Aligned_cols=42 Identities=36% Similarity=0.654 Sum_probs=35.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC----CCcEEEEecCCCC---------Cceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL----GLKTTCIEKRGAL---------GGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~~~---------GG~~~~ 84 (507)
..||+|||||-.|.+.|..|+++ |++|++||+++.. ||.|..
T Consensus 86 ~~dVvIIGGG~~GsS~AfWLKer~rd~gl~VvVVErddtytqssT~lSvGGi~QQ 140 (509)
T KOG2853|consen 86 HCDVVIIGGGGSGSSTAFWLKERARDEGLNVVVVERDDTYTQSSTMLSVGGICQQ 140 (509)
T ss_pred ccCEEEECCCccchhhHHHHHHHhhcCCceEEEEeccCcccccceeeeecceeee
Confidence 57999999999999999999875 7999999997643 677754
No 386
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=97.55 E-value=0.0007 Score=68.58 Aligned_cols=97 Identities=15% Similarity=0.262 Sum_probs=69.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCccCCC-----CCH-------------HH-------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADIVPS-----MDG-------------EI------------------- 257 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~~~~-----~d~-------------~~------------------- 257 (507)
+|+|||+|..|+-+|..|.+.| .+|+++++.+.+... +.+ .+
T Consensus 2 ~V~IiGgGiaGla~A~~L~~~g~~~v~v~Er~~~~~~~G~gi~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 81 (414)
T TIGR03219 2 RVAIIGGGIAGVALALNLCKHSHLNVQLFEAAPAFGEVGAGVSFGANAVRAIVGLGLGEAYTQVADSTPAPWQDIWFEWR 81 (414)
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCEEEEecCCcCCCCccceeeCccHHHHHHHcCChhHHHHHhcCCCccCcceeEEEE
Confidence 6999999999999999999998 599999987664210 000 00
Q ss_pred ----------------------HHHHHHHHHhc--CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeec
Q 010573 258 ----------------------RKQFQRSLEKQ--KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG 313 (507)
Q Consensus 258 ----------------------~~~~~~~l~~~--Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G 313 (507)
...+.+.|.+. ...+++++++++++.+++++.+++. ++.++.+|.||.|.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~R~~l~~~L~~~~~~~~v~~~~~v~~i~~~~~~~~v~~~-----~g~~~~ad~vVgADG 156 (414)
T TIGR03219 82 NGSDASYLGATIAPGVGQSSVHRADFLDALLKHLPEGIASFGKRATQIEEQAEEVQVLFT-----DGTEYRCDLLIGADG 156 (414)
T ss_pred ecCccceeeeeccccCCcccCCHHHHHHHHHHhCCCceEEcCCEEEEEEecCCcEEEEEc-----CCCEEEeeEEEECCC
Confidence 00111222211 4557789999999887788888775 456799999999999
Q ss_pred CCCC
Q 010573 314 RTPF 317 (507)
Q Consensus 314 ~~p~ 317 (507)
....
T Consensus 157 ~~S~ 160 (414)
T TIGR03219 157 IKSA 160 (414)
T ss_pred ccHH
Confidence 7764
No 387
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated
Probab=97.55 E-value=0.001 Score=68.99 Aligned_cols=94 Identities=20% Similarity=0.363 Sum_probs=65.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC-cc--CC-----------------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA-DI--VP----------------------------------------- 251 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~--~~----------------------------------------- 251 (507)
.|+|||||+.|+++|..+++.|.+|.++++.. .+ ++
T Consensus 6 DVIVVGGGpAG~eAA~~aAR~G~kV~LiE~~~d~iG~m~CnpsiGG~akg~lvrEidalGg~~g~~~d~~giq~r~ln~s 85 (618)
T PRK05192 6 DVIVVGGGHAGCEAALAAARMGAKTLLLTHNLDTIGQMSCNPAIGGIAKGHLVREIDALGGEMGKAIDKTGIQFRMLNTS 85 (618)
T ss_pred eEEEECchHHHHHHHHHHHHcCCcEEEEecccccccccCCccccccchhhHHHHHHHhcCCHHHHHHhhccCceeecccC
Confidence 59999999999999999999999999998763 22 00
Q ss_pred ----------CCCHH-HHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 010573 252 ----------SMDGE-IRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 252 ----------~~d~~-~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.+|.. ....+.+.+++. |++++ ...++++..+++.+. |.+. ++..+.++.||+|+|..
T Consensus 86 kGpAV~s~RaQiDr~ly~kaL~e~L~~~~nV~I~-q~~V~~Li~e~grV~GV~t~-----dG~~I~Ak~VIlATGTF 156 (618)
T PRK05192 86 KGPAVRALRAQADRKLYRAAMREILENQPNLDLF-QGEVEDLIVENGRVVGVVTQ-----DGLEFRAKAVVLTTGTF 156 (618)
T ss_pred CCCceeCcHHhcCHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEecCCEEEEEEEC-----CCCEEECCEEEEeeCcc
Confidence 00000 122333444444 78875 566787766666554 5543 45789999999999953
No 388
>KOG2852 consensus Possible oxidoreductase [General function prediction only]
Probab=97.55 E-value=0.0017 Score=59.38 Aligned_cols=42 Identities=26% Similarity=0.450 Sum_probs=35.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCC------CcEEEEecCCCCCce
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLG------LKTTCIEKRGALGGT 81 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g------~~V~lie~~~~~GG~ 81 (507)
+.+..+++|||||..|.++|+.|.+.+ ..|+|||+....||.
T Consensus 7 ~~nsk~I~IvGGGIiGvctayyLt~~~sf~~~~~~ItifEs~~IA~ga 54 (380)
T KOG2852|consen 7 EGNSKKIVIVGGGIIGVCTAYYLTEHPSFKKGELDITIFESKEIAGGA 54 (380)
T ss_pred cCCceEEEEECCCceeeeeehhhhcCCccCCCceeEEEEeeccccccc
Confidence 334578999999999999999999986 789999997766643
No 389
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.54 E-value=0.0002 Score=76.80 Aligned_cols=91 Identities=29% Similarity=0.408 Sum_probs=68.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .+++++.....+.+++.|++++.++.+..
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~--- 402 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK--- 402 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC---
Confidence 46899999999999999999999999999999876542 2 24566666667778889999999886621
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+.+. .....+|.|++|+|..+.
T Consensus 403 -----~i~~~------~~~~~~DavilAtGa~~~ 425 (654)
T PRK12769 403 -----DISLE------SLLEDYDAVFVGVGTYRS 425 (654)
T ss_pred -----cCCHH------HHHhcCCEEEEeCCCCCC
Confidence 11111 112468999999997643
No 390
>PTZ00153 lipoamide dehydrogenase; Provisional
Probab=97.53 E-value=0.00072 Score=71.63 Aligned_cols=34 Identities=21% Similarity=0.124 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
.+++|||||+.|+..|..+++.|.+|+||++.+.
T Consensus 313 k~VvIVGgG~iGvE~A~~l~~~G~eVTLIe~~~~ 346 (659)
T PTZ00153 313 NYMGIVGMGIIGLEFMDIYTALGSEVVSFEYSPQ 346 (659)
T ss_pred CceEEECCCHHHHHHHHHHHhCCCeEEEEeccCc
Confidence 5799999999999999999999999999998654
No 391
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=97.51 E-value=0.00012 Score=76.86 Aligned_cols=36 Identities=36% Similarity=0.545 Sum_probs=33.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
.+.++|+|||||++|+++|..|++.|++|+|+|+..
T Consensus 79 ~~~~~VlIVGgGIaGLalAlaL~r~Gi~V~V~Er~~ 114 (668)
T PLN02927 79 KKKSRVLVAGGGIGGLVFALAAKKKGFDVLVFEKDL 114 (668)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhcCCeEEEEeccc
Confidence 356899999999999999999999999999999964
No 392
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.50 E-value=0.00033 Score=72.40 Aligned_cols=80 Identities=26% Similarity=0.298 Sum_probs=63.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~ 292 (507)
.+++++|+|+|.+|+++|..|.+.|.+|+++++.+. +....+.+.+++.||+++++..+.
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~-------~~~~~~~~~l~~~gv~~~~~~~~~------------- 74 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDD-------ERHRALAAILEALGATVRLGPGPT------------- 74 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCch-------hhhHHHHHHHHHcCCEEEECCCcc-------------
Confidence 467999999999999999999999999999986642 334455677888899998765432
Q ss_pred eecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 293 EPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 293 ~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
....+|.||+++|..|+.+.
T Consensus 75 --------~~~~~D~Vv~s~Gi~~~~~~ 94 (480)
T PRK01438 75 --------LPEDTDLVVTSPGWRPDAPL 94 (480)
T ss_pred --------ccCCCCEEEECCCcCCCCHH
Confidence 02348999999999999874
No 393
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare [].; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0016117 carotenoid biosynthetic process
Probab=97.50 E-value=0.0012 Score=65.89 Aligned_cols=96 Identities=22% Similarity=0.345 Sum_probs=71.2
Q ss_pred eEEEEcCcHHHHHHHHHH--HhcCCeeEEEcccCcc--CC-----CC-------C-------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVW--ARLGSEVTVVEFAADI--VP-----SM-------D------------------------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l--~~~g~~Vtlv~~~~~~--~~-----~~-------d------------------------- 254 (507)
.|+|||+|+.|+-+|..+ .+.|.+|.++++.+.. -. .. +
T Consensus 1 DviIvGaGpAGlslA~~l~~~~~g~~Vllid~~~~~~~~~~~tW~~~~~~~~~~~~~v~~~w~~~~v~~~~~~~~~~~~~ 80 (374)
T PF05834_consen 1 DVIIVGAGPAGLSLARRLADARPGLSVLLIDPKPKPPWPNDRTWCFWEKDLGPLDSLVSHRWSGWRVYFPDGSRILIDYP 80 (374)
T ss_pred CEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCccccccCCcccccccccccchHHHHheecCceEEEeCCCceEEcccc
Confidence 379999999999999999 7889999999876554 10 00 0
Q ss_pred ------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 ------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 ------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+.+.+.+.+...| .++.++.|++++..++...+.+. +++++.++.||-|.|..+.
T Consensus 81 Y~~i~~~~f~~~l~~~~~~~~-~~~~~~~V~~i~~~~~~~~v~~~-----~g~~i~a~~VvDa~g~~~~ 143 (374)
T PF05834_consen 81 YCMIDRADFYEFLLERAAAGG-VIRLNARVTSIEETGDGVLVVLA-----DGRTIRARVVVDARGPSSP 143 (374)
T ss_pred eEEEEHHHHHHHHHHHhhhCC-eEEEccEEEEEEecCceEEEEEC-----CCCEEEeeEEEECCCcccc
Confidence 234445556666445 45678999999888776667665 5669999999999996654
No 394
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [].
Probab=97.49 E-value=0.00068 Score=67.45 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=36.4
Q ss_pred CcEEEECCChHHHHHHHHHHHC----CCcEEEEecCCCCCceeccc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL----GLKTTCIEKRGALGGTCLNV 85 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~~~GG~~~~~ 85 (507)
.+.=|||+|.|+|+||..|.|- |.+|+|+|+.+..||.+.-.
T Consensus 3 ~~AyivGsGiAsLAAAvfLIrDa~~pg~nIhIlE~~~~~GGsldg~ 48 (500)
T PF06100_consen 3 KKAYIVGSGIASLAAAVFLIRDAKMPGENIHILEELDVPGGSLDGA 48 (500)
T ss_pred ceEEEECCCHHHHHhhhhhhccCCCCccceEEEeCCCCCCCcccCC
Confidence 5788999999999999999986 57999999999999876543
No 395
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Probab=97.49 E-value=0.0012 Score=67.43 Aligned_cols=98 Identities=17% Similarity=0.406 Sum_probs=71.2
Q ss_pred eEEEEcCcHHHHHHHHHHHh----cCCeeEEEcccC--ccC------C---------CCC--------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWAR----LGSEVTVVEFAA--DIV------P---------SMD-------------------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~----~g~~Vtlv~~~~--~~~------~---------~~d-------------------- 254 (507)
.|+|||+|+.|+-+|..|++ .|.+|+++++.+ ... + .+.
T Consensus 2 DV~IVGaGp~Gl~~A~~La~~~~~~G~~v~viE~~~~~~~~~~~~~~~~~~~~~R~~~l~~~s~~~L~~lG~~~~l~~~~ 81 (437)
T TIGR01989 2 DVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDNPKLKSRNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSDR 81 (437)
T ss_pred cEEEECCcHHHHHHHHHHhcCcccCCCeEEEEeCCCCcccccccccCCCCCCCCCeEEcCHHHHHHHHHcCchhhhhhhc
Confidence 48999999999999999998 799999999832 110 0 000
Q ss_pred -----------------------------------HHHHHHHHHHHHhc---CcEEEcCceEEEEEEc-------CCeEE
Q 010573 255 -----------------------------------GEIRKQFQRSLEKQ---KMKFMLKTKVVGVDLS-------GDGVK 289 (507)
Q Consensus 255 -----------------------------------~~~~~~~~~~l~~~---Gv~i~~~~~v~~i~~~-------~~~v~ 289 (507)
..+.+.+.+.+++. +++++.++++++++.+ ++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~~~v~i~~~~~v~~i~~~~~~~~~~~~~v~ 161 (437)
T TIGR01989 82 IQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLQEYNGDNVKILNPARLISVTIPSKYPNDNSNWVH 161 (437)
T ss_pred CCceeeEEEecCCCCceEEeecCCCCCceEEEEEHHHHHHHHHHHHHhCCCCCeEEecCCeeEEEEeccccccCCCCceE
Confidence 12333345555555 4999999999999642 35667
Q ss_pred EEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 290 LTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 290 v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+++. +++++.+|+||-|.|.....
T Consensus 162 v~~~-----~g~~i~a~llVgADG~~S~v 185 (437)
T TIGR01989 162 ITLS-----DGQVLYTKLLIGADGSNSNV 185 (437)
T ss_pred EEEc-----CCCEEEeeEEEEecCCCChh
Confidence 7764 45689999999999988765
No 396
>TIGR02462 pyranose_ox pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation.
Probab=97.49 E-value=0.00019 Score=73.90 Aligned_cols=39 Identities=31% Similarity=0.301 Sum_probs=36.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
|||+|||+||+|+.+|..|++.|++|++||+....||.|
T Consensus 1 ~dv~ivg~Gp~G~~~a~~l~~~g~~v~~~e~~~~~~~~~ 39 (544)
T TIGR02462 1 YDVFIAGSGPIGCTYARLCVDAGLKVAMVEIGAADSFLK 39 (544)
T ss_pred CcEEEECCchHHHHHHHHHHHCCCeEEEEeccCccCCCc
Confidence 699999999999999999999999999999988887643
No 397
>COG3573 Predicted oxidoreductase [General function prediction only]
Probab=97.48 E-value=0.00017 Score=67.10 Aligned_cols=43 Identities=35% Similarity=0.589 Sum_probs=38.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC--CCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG--ALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~--~~GG~~~~ 84 (507)
..+||+|||+|.||+-||.+|+..|++|+|+|++. .+||+..+
T Consensus 4 ~~~dvivvgaglaglvaa~elA~aG~~V~ildQEgeqnlGGQAfW 48 (552)
T COG3573 4 LTADVIVVGAGLAGLVAAAELADAGKRVLILDQEGEQNLGGQAFW 48 (552)
T ss_pred ccccEEEECccHHHHHHHHHHHhcCceEEEEcccccccccceeee
Confidence 45899999999999999999999999999999965 57777654
No 398
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion]
Probab=97.47 E-value=0.00062 Score=64.71 Aligned_cols=98 Identities=16% Similarity=0.286 Sum_probs=72.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||.-||..+.--.|+|.+|++||-.+.+||...
T Consensus 211 Pk~~~viG~G~IGLE~gsV~~rLGseVT~VEf~~~i~~~mD--------------------------------------- 251 (506)
T KOG1335|consen 211 PKKLTVIGAGYIGLEMGSVWSRLGSEVTVVEFLDQIGGVMD--------------------------------------- 251 (506)
T ss_pred cceEEEEcCceeeeehhhHHHhcCCeEEEEEehhhhccccC---------------------------------------
Confidence 46899999999999999999999999999998777766310
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCC-EEEEEc---cCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPS-EVSVDT---IEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~-~~~v~~---~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
.++...++..+++.+++|..++ +... +.+ .+.+.+ .+++..++++|.+++++|-+|.
T Consensus 252 ----------~Eisk~~qr~L~kQgikF~l~tkv~~a~~~~dg~v~i~ve~ak~~k~~tle~DvlLVsiGRrP~ 315 (506)
T KOG1335|consen 252 ----------GEISKAFQRVLQKQGIKFKLGTKVTSATRNGDGPVEIEVENAKTGKKETLECDVLLVSIGRRPF 315 (506)
T ss_pred ----------HHHHHHHHHHHHhcCceeEeccEEEEeeccCCCceEEEEEecCCCceeEEEeeEEEEEccCccc
Confidence 1122333556777899998885 3332 222 455543 3456789999999999999986
No 399
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. Members of this family are the enzyme 4-hydroxybenzoate 3-monooxygenase, also called p-hydroxybenzoate hydroxylase. It converts 4-hydroxybenzoate + NADPH + molecular oxygen to protocatechuate + NADPH + water. It contains monooxygenase (pfam01360) and FAD binding (pfam01494) domains. Pathways that contain this enzyme include the protocatechuate 4,5-degradation pathway.
Probab=97.47 E-value=0.0018 Score=64.93 Aligned_cols=103 Identities=20% Similarity=0.332 Sum_probs=71.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--C-----CCC--------------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--P-----SMD-------------------------------- 254 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~-----~~d-------------------------------- 254 (507)
+.+|+|||+|+.|+-+|..|++.|.+|+++++.+... . .+.
T Consensus 2 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~a~~l~~~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~ 81 (390)
T TIGR02360 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQSRDYVLGRIRAGVLEQGTVDLLREAGVDERMDREGLVHEGTEIAFDG 81 (390)
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCEEEEECCCCcccCCceeEeeECHHHHHHHHHCCChHHHHhcCceecceEEeeCC
Confidence 3579999999999999999999999999999877411 0 000
Q ss_pred ---------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEE-cCCeEEEEEeecCCCceEEEEcCEEEEee
Q 010573 255 ---------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDL-SGDGVKLTLEPAAGGEKTILEADVVLVSA 312 (507)
Q Consensus 255 ---------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~v~~~~~~~g~~~~i~~D~vi~a~ 312 (507)
..+...+.+.+.+.|+.++++.+++.+.. +++...|++.. +|...++.+|+||-|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~v~~~~~~~~~~~V~~~~--~g~~~~i~adlvIGAD 159 (390)
T TIGR02360 82 QRFRIDLKALTGGKTVMVYGQTEVTRDLMEAREAAGLTTVYDADDVRLHDLAGDRPYVTFER--DGERHRLDCDFIAGCD 159 (390)
T ss_pred EEEEEeccccCCCceEEEeCHHHHHHHHHHHHHhcCCeEEEeeeeEEEEecCCCccEEEEEE--CCeEEEEEeCEEEECC
Confidence 11123334445556888888877766643 44555666631 2333479999999999
Q ss_pred cCCCCC
Q 010573 313 GRTPFT 318 (507)
Q Consensus 313 G~~p~~ 318 (507)
|.....
T Consensus 160 G~~S~V 165 (390)
T TIGR02360 160 GFHGVS 165 (390)
T ss_pred CCchhh
Confidence 987754
No 400
>PLN03000 amine oxidase
Probab=97.46 E-value=0.00017 Score=77.46 Aligned_cols=43 Identities=33% Similarity=0.573 Sum_probs=39.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
...+|+|||||++|+.||..|++.|++|+|+|+++++||.+..
T Consensus 183 ~~~~VvIIGaG~aGL~aA~~L~~~G~~V~VlE~~~riGGRi~T 225 (881)
T PLN03000 183 SKSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYT 225 (881)
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCcEEEEEccCcCCCCcce
Confidence 4579999999999999999999999999999999999988753
No 401
>PRK06185 hypothetical protein; Provisional
Probab=97.46 E-value=0.0025 Score=64.43 Aligned_cols=101 Identities=22% Similarity=0.363 Sum_probs=71.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-----CC--------------C--------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----SM--------------D-------------------- 254 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----~~--------------d-------------------- 254 (507)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .+ +
T Consensus 6 ~~dV~IvGgG~~Gl~~A~~La~~G~~v~liE~~~~~~~~~r~~~l~~~s~~~L~~lG~~~~~~~~~~~~~~~~~~~~~~~ 85 (407)
T PRK06185 6 TTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHADFLRDFRGDTVHPSTLELMDELGLLERFLELPHQKVRTLRFEIGGR 85 (407)
T ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCccCccccCceeChhHHHHHHHcCChhHHhhcccceeeeEEEEECCe
Confidence 35799999999999999999999999999997643200 00 0
Q ss_pred ----------------------HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCce-EEEEcCEEE
Q 010573 255 ----------------------GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEK-TILEADVVL 309 (507)
Q Consensus 255 ----------------------~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~-~~i~~D~vi 309 (507)
..+.+.+.+.+.+ .|++++.++++++++.+++.+. +.+.. . ++ .++.+|.||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~~~v~i~~~~~v~~~~~~~~~v~~v~~~~-~--~g~~~i~a~~vI 162 (407)
T PRK06185 86 TVTLADFSRLPTPYPYIAMMPQWDFLDFLAEEASAYPNFTLRMGAEVTGLIEEGGRVTGVRART-P--DGPGEIRADLVV 162 (407)
T ss_pred EEEecchhhcCCCCCcEEEeehHHHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEc-C--CCcEEEEeCEEE
Confidence 1222333444444 4899999999999987766653 44432 1 23 479999999
Q ss_pred EeecCCCC
Q 010573 310 VSAGRTPF 317 (507)
Q Consensus 310 ~a~G~~p~ 317 (507)
.|.|....
T Consensus 163 ~AdG~~S~ 170 (407)
T PRK06185 163 GADGRHSR 170 (407)
T ss_pred ECCCCchH
Confidence 99998764
No 402
>PRK11445 putative oxidoreductase; Provisional
Probab=97.43 E-value=0.0027 Score=62.69 Aligned_cols=100 Identities=15% Similarity=0.212 Sum_probs=70.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--C-------CCCHH------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--P-------SMDGE------------------------------ 256 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~-------~~d~~------------------------------ 256 (507)
.|+|||+|+.|+-+|..|++. .+|+++++.+... + .+.+.
T Consensus 3 dV~IvGaGpaGl~~A~~La~~-~~V~liE~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~~~ 81 (351)
T PRK11445 3 DVAIIGLGPAGSALARLLAGK-MKVIAIDKKHQCGTEGFSKPCGGLLAPDAQKSFAKDGLTLPKDVIANPQIFAVKTIDL 81 (351)
T ss_pred eEEEECCCHHHHHHHHHHhcc-CCEEEEECCCccccccccCcCcCccCHHHHHHHHHcCCCCCcceeeccccceeeEecc
Confidence 589999999999999999998 9999999776320 0 00000
Q ss_pred --------------H-HHHHHHH---HHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 257 --------------I-RKQFQRS---LEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 257 --------------~-~~~~~~~---l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+ ...+.+. ..+.|++++.++.++.++.+++++.+++.. +++..++.+|.||.|.|.....
T Consensus 82 ~~~~~~~~~~~~~~i~R~~~~~~L~~~~~~gv~v~~~~~v~~i~~~~~~~~v~~~~--~g~~~~i~a~~vV~AdG~~S~v 159 (351)
T PRK11445 82 ANSLTRNYQRSYINIDRHKFDLWLKSLIPASVEVYHNSLCRKIWREDDGYHVIFRA--DGWEQHITARYLVGADGANSMV 159 (351)
T ss_pred cccchhhcCCCcccccHHHHHHHHHHHHhcCCEEEcCCEEEEEEEcCCEEEEEEec--CCcEEEEEeCEEEECCCCCcHH
Confidence 0 1111122 234689999999999998877887777532 2333479999999999987644
No 403
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=97.43 E-value=0.00015 Score=73.57 Aligned_cols=97 Identities=25% Similarity=0.410 Sum_probs=28.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-----------C--------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----------S-------------------------------- 252 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----------~-------------------------------- 252 (507)
.|+|||||+.|+-.|..+++.|.+|.|+++.+.+.. .
T Consensus 1 DVVVvGgG~aG~~AAi~AAr~G~~VlLiE~~~~lGG~~t~~~~~~~~~~~~~~~~~~gi~~e~~~~~~~~~~~~~~~~~~ 80 (428)
T PF12831_consen 1 DVVVVGGGPAGVAAAIAAARAGAKVLLIEKGGFLGGMATSGGVSPFDGNHDEDQVIGGIFREFLNRLRARGGYPQEDRYG 80 (428)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTS-EEEE-SSSSSTGGGGGSSS-EETTEEHHHHHHHHHHHHHHHST-------------
T ss_pred CEEEECccHHHHHHHHHHHHCCCEEEEEECCccCCCcceECCcCChhhcchhhccCCCHHHHHHHHHhhhcccccccccc
Confidence 489999999999999999999999999998876520 0
Q ss_pred ------CCHHH-HHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 253 ------MDGEI-RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 253 ------~d~~~-~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
++++. ...+.+.+++.|+++++++.+.++..+++.+. |.+.+.+ | ..++.++.+|-|+|.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~e~gv~v~~~t~v~~v~~~~~~i~~V~~~~~~-g-~~~i~A~~~IDaTG~ 148 (428)
T PF12831_consen 81 WVSNVPFDPEVFKAVLDEMLAEAGVEVLLGTRVVDVIRDGGRITGVIVETKS-G-RKEIRAKVFIDATGD 148 (428)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-c-ccccccccccccccc
Confidence 11111 12345666678999999999999988776654 5554322 3 578999999999994
No 404
>TIGR02028 ChlP geranylgeranyl reductase. This model represents the reductase which acts reduces the geranylgeranyl group to the phytyl group in the side chain of chlorophyll. It is unclear whether the enzyme has a preference for acting before or after the attachment of the side chain to chlorophyllide a by chlorophyll synthase. This clade is restricted to plants and cyanobacteria to separate it from the homologues which act in the biosynthesis of bacteriochlorophyll.
Probab=97.42 E-value=0.0023 Score=64.28 Aligned_cols=102 Identities=19% Similarity=0.269 Sum_probs=67.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC------------CC--C---------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------SM--D--------------------------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------~~--d--------------------------- 254 (507)
+|+|||+|+.|+-+|..+++.|.+|.++++.+.... .+ +
T Consensus 2 ~VvIVGaGPAG~~aA~~la~~G~~V~llE~~~~~~~~cg~~i~~~~l~~~g~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 81 (398)
T TIGR02028 2 RVAVVGGGPAGASAAETLASAGIQTFLLERKPDNAKPCGGAIPLCMVDEFALPRDIIDRRVTKMKMISPSNIAVDIGRTL 81 (398)
T ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCCCCccccccHhhHhhccCchhHHHhhhceeEEecCCceEEEeccCC
Confidence 589999999999999999999999999997643210 00 0
Q ss_pred -----------HHHHHHHHHHHHhcCcEEEcCceEEEEEE---cCCeEEEEEeecC----CCceEEEEcCEEEEeecCCC
Q 010573 255 -----------GEIRKQFQRSLEKQKMKFMLKTKVVGVDL---SGDGVKLTLEPAA----GGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 -----------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~---~~~~v~v~~~~~~----~g~~~~i~~D~vi~a~G~~p 316 (507)
..+-+.+.+...+.|++++.++ +..++. .++...+++.... .++..++.++.||.|+|..+
T Consensus 82 ~~~~~~~~v~R~~~d~~L~~~a~~~G~~v~~~~-~~~i~~~~~~~~~~~v~~~~~~~~~~~g~~~~i~a~~VIgADG~~S 160 (398)
T TIGR02028 82 KEHEYIGMLRREVLDSFLRRRAADAGATLINGL-VTKLSLPADADDPYTLHYISSDSGGPSGTRCTLEVDAVIGADGANS 160 (398)
T ss_pred CCCCceeeeeHHHHHHHHHHHHHHCCcEEEcce-EEEEEeccCCCceEEEEEeeccccccCCCccEEEeCEEEECCCcch
Confidence 0111234445566799997664 666542 2334455543211 13345799999999999876
Q ss_pred CC
Q 010573 317 FT 318 (507)
Q Consensus 317 ~~ 318 (507)
..
T Consensus 161 ~v 162 (398)
T TIGR02028 161 RV 162 (398)
T ss_pred HH
Confidence 44
No 405
>PLN00093 geranylgeranyl diphosphate reductase; Provisional
Probab=97.39 E-value=0.0041 Score=63.40 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=69.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC------------C--CC------------------------
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------S--MD------------------------ 254 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------~--~d------------------------ 254 (507)
..-.|+|||+|+.|+-+|..|++.|.+|.++++.+.... . ++
T Consensus 38 ~~~DViIVGaGPAG~~aA~~LA~~G~~VlllEr~~~~~k~cgg~i~~~~l~~lgl~~~~~~~~i~~~~~~~p~~~~v~~~ 117 (450)
T PLN00093 38 RKLRVAVIGGGPAGACAAETLAKGGIETFLIERKLDNAKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 117 (450)
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCCCCccccccHhHHhhhcCcHHHHHHHhhhheEecCCceEEEec
Confidence 345799999999999999999999999999997643110 0 00
Q ss_pred --------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEc---CCeEEEEEeecC----CCceEEEEcCEEEEeec
Q 010573 255 --------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLS---GDGVKLTLEPAA----GGEKTILEADVVLVSAG 313 (507)
Q Consensus 255 --------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~---~~~v~v~~~~~~----~g~~~~i~~D~vi~a~G 313 (507)
..+-+.+.+...+.|++++.+ .+++++.. ++.+.+++.... +++..++.+|.||-|.|
T Consensus 118 ~~~~~~~~~~~v~R~~~d~~L~~~A~~~Ga~~~~~-~v~~i~~~~~~~~~~~v~~~~~~~~~~~g~~~~v~a~~VIgADG 196 (450)
T PLN00093 118 KTLKPHEYIGMVRREVLDSFLRERAQSNGATLING-LFTRIDVPKDPNGPYVIHYTSYDSGSGAGTPKTLEVDAVIGADG 196 (450)
T ss_pred ccCCCCCeEEEecHHHHHHHHHHHHHHCCCEEEec-eEEEEEeccCCCCcEEEEEEeccccccCCCccEEEeCEEEEcCC
Confidence 011223444556678998754 46666532 234556654310 13346899999999999
Q ss_pred CCCCC
Q 010573 314 RTPFT 318 (507)
Q Consensus 314 ~~p~~ 318 (507)
.....
T Consensus 197 ~~S~v 201 (450)
T PLN00093 197 ANSRV 201 (450)
T ss_pred cchHH
Confidence 76543
No 406
>PLN02976 amine oxidase
Probab=97.39 E-value=0.00022 Score=79.37 Aligned_cols=44 Identities=32% Similarity=0.652 Sum_probs=40.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
...++|+|||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 691 ~~~~dV~IIGAG~AGLaAA~~L~~~G~~V~VlEa~~~vGGri~t 734 (1713)
T PLN02976 691 VDRKKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVYT 734 (1713)
T ss_pred CCCCcEEEECchHHHHHHHHHHHHCCCcEEEEeeccCCCCceee
Confidence 34589999999999999999999999999999999999998754
No 407
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ]. These enzymes include a variety of proteins; choline dehydrogenase (CHD), methanol oxidase (MOX) and cellobiose dehydrogenase (1.1.99.18 from EC) [] which share a number of regions of sequence similarities. One of these regions, located in the N-terminal section, corresponds to the FAD ADP- binding domain. The function of the other conserved domains is not yet known.; GO: 0016614 oxidoreductase activity, acting on CH-OH group of donors, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 3Q9T_B 1B4V_A 3GYJ_A 1CBO_A 1B8S_A 1N4V_A 1N4W_A 3CNJ_A 1IJH_A 2GEW_A ....
Probab=97.38 E-value=0.00015 Score=69.94 Aligned_cols=63 Identities=16% Similarity=0.339 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhcCcEEEcCceEEEEEEc--CCeEE-EEEeecCCC-ceEEEEcCEEEEeecCCCCCC
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLS--GDGVK-LTLEPAAGG-EKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~-v~~~~~~~g-~~~~i~~D~vi~a~G~~p~~~ 319 (507)
....+...++..++++++++.|++|..+ +..+. |++.+.... ....+.++.||+|.|.--...
T Consensus 195 ~~~~L~~a~~~~n~~l~~~~~V~~i~~~~~~~~a~gV~~~~~~~~~~~~~~~ak~VIlaAGai~Tp~ 261 (296)
T PF00732_consen 195 ATTYLPPALKRPNLTLLTNARVTRIIFDGDGGRATGVEYVDNDGGVQRRIVAAKEVILAAGAIGTPR 261 (296)
T ss_dssp HHHHHHHHTTTTTEEEEESEEEEEEEEETTSTEEEEEEEEETTTSEEEEEEEEEEEEE-SHHHHHHH
T ss_pred hhcccchhhccCCccEEcCcEEEEEeeeccccceeeeeeeecCCcceeeeccceeEEeccCCCCChh
Confidence 3455667776669999999999999543 44443 666554332 245678999999999644333
No 408
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.38 E-value=0.001 Score=68.69 Aligned_cols=33 Identities=33% Similarity=0.449 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+++|||+|++|+++|..|++.|++|+++|+.
T Consensus 16 ~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~ 48 (480)
T PRK01438 16 GLRVVVAGLGVSGFAAADALLELGARVTVVDDG 48 (480)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999973
No 409
>TIGR01789 lycopene_cycl lycopene cyclase. This model represents a family of bacterial lycopene cyclases catalyzing the transformation of lycopene to carotene. These enzymes are found in a limited spectrum of alpha and gamma proteobacteria as well as Flavobacterium.
Probab=97.34 E-value=0.00095 Score=66.27 Aligned_cols=93 Identities=25% Similarity=0.370 Sum_probs=62.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccCC-----CCCHHHH----H-------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIVP-----SMDGEIR----K------------------------- 259 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~-----~~d~~~~----~------------------------- 259 (507)
.++|||+|..|+.+|..|.+. |.+|.++++.+...+ .++.++. .
T Consensus 1 DviIvGaG~AGl~lA~~L~~~~~g~~V~lle~~~~~~~~~tw~~~~~~~~~~~~~~~~~~v~~~W~~~~v~~~~~~~~l~ 80 (370)
T TIGR01789 1 DCIIVGGGLAGGLIALRLQRARPDFRIRVIEAGRTIGGNHTWSFFDSDLSDAQHAWLADLVQTDWPGYEVRFPKYRRKLK 80 (370)
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCcccceecccccchhhhhhhhhhheEeCCCCEEECcchhhhcC
Confidence 379999999999999999987 999999998764322 1111111 0
Q ss_pred ---------HHHHH-HHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 260 ---------QFQRS-LEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 260 ---------~~~~~-l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+.+. +++.+..++++++|+++ +.+++.+ . +++++.+|.||.|.|..+.
T Consensus 81 ~~Y~~I~r~~f~~~l~~~l~~~i~~~~~V~~v--~~~~v~l--~-----dg~~~~A~~VI~A~G~~s~ 139 (370)
T TIGR01789 81 TAYRSMTSTRFHEGLLQAFPEGVILGRKAVGL--DADGVDL--A-----PGTRINARSVIDCRGFKPS 139 (370)
T ss_pred CCceEEEHHHHHHHHHHhhcccEEecCEEEEE--eCCEEEE--C-----CCCEEEeeEEEECCCCCCC
Confidence 11122 22223336678888888 3445444 3 5678999999999998864
No 410
>PRK08294 phenol 2-monooxygenase; Provisional
Probab=97.29 E-value=0.0039 Score=66.40 Aligned_cols=103 Identities=16% Similarity=0.264 Sum_probs=72.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhc-CCeeEEEcccCccCCC-----------------------------------CC---
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADIVPS-----------------------------------MD--- 254 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~-----------------------------------~d--- 254 (507)
.-+|+|||+|+.|+-+|..|++. |.+|+++++.+..... ++
T Consensus 32 ~~dVlIVGAGPaGL~lA~~Lar~~Gi~v~IiE~~~~~~~~grA~gl~prtleiL~~lGl~d~l~~~g~~~~~~~~~~~~~ 111 (634)
T PRK08294 32 EVDVLIVGCGPAGLTLAAQLSAFPDITTRIVERKPGRLELGQADGIACRTMEMFQAFGFAERILKEAYWINETAFWKPDP 111 (634)
T ss_pred CCCEEEECCCHHHHHHHHHHhcCCCCcEEEEEcCCCCCCCCeeeEEChHHHHHHHhccchHHHHhhcccccceEEEcCCC
Confidence 34799999999999999999995 9999999877543200 00
Q ss_pred -----------------------------HHHHHHHHHHHHhcC--cEEEcCceEEEEEEcC---CeEEEEEeecC---C
Q 010573 255 -----------------------------GEIRKQFQRSLEKQK--MKFMLKTKVVGVDLSG---DGVKLTLEPAA---G 297 (507)
Q Consensus 255 -----------------------------~~~~~~~~~~l~~~G--v~i~~~~~v~~i~~~~---~~v~v~~~~~~---~ 297 (507)
..+.+.+.+.+.+.| +++..+++++.++.++ ..+++++++.. +
T Consensus 112 ~~~~~i~r~~~~~~~~~~~~~~~~~~l~Q~~le~~L~~~l~~~g~~v~v~~g~~v~~~~~~~~~~~~V~v~l~~~~~~~~ 191 (634)
T PRK08294 112 ADPSTIVRTGRVQDTEDGLSEFPHVIVNQARVHDYFLDVMRNSPTRLEPDYGREFVDLEVDEEGEYPVTVTLRRTDGEHE 191 (634)
T ss_pred ccccceeccccccccCCCCCCCccEeeCHHHHHHHHHHHHHhcCCceEEEeCcEEEEEEECCCCCCCEEEEEEECCCCCC
Confidence 012333445555555 5778899999997654 34778876432 2
Q ss_pred CceEEEEcCEEEEeecCCC
Q 010573 298 GEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 298 g~~~~i~~D~vi~a~G~~p 316 (507)
|..+++.+|+||-|-|.+.
T Consensus 192 g~~~tv~A~~lVGaDGa~S 210 (634)
T PRK08294 192 GEEETVRAKYVVGCDGARS 210 (634)
T ss_pred CceEEEEeCEEEECCCCch
Confidence 3346899999999999664
No 411
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=97.29 E-value=0.0036 Score=70.29 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=70.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC----------CC-HHHHHHHHHHHHhc-CcEEEcCceEEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS----------MD-GEIRKQFQRSLEKQ-KMKFMLKTKVVGV 281 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~d-~~~~~~~~~~l~~~-Gv~i~~~~~v~~i 281 (507)
..+|+|||+|+.|+..|..+++.|.+|++++..+.+... .+ .+....+.+.+++. +++++.++.|..+
T Consensus 163 ~~dVvIIGaGPAGLaAA~~aar~G~~V~liD~~~~~GG~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~v~v~~~t~V~~i 242 (985)
T TIGR01372 163 HCDVLVVGAGPAGLAAALAAARAGARVILVDEQPEAGGSLLSEAETIDGKPAADWAAATVAELTAMPEVTLLPRTTAFGY 242 (985)
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCCCeeeccccccCCccHHHHHHHHHHHHhcCCCcEEEcCCEEEEE
Confidence 467999999999999999999999999999987654211 11 23334455556555 5999999999887
Q ss_pred EEcCCeEE-EE-Eee----c----CCCceEEEEcCEEEEeecCCCCCC
Q 010573 282 DLSGDGVK-LT-LEP----A----AGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 282 ~~~~~~v~-v~-~~~----~----~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
... +.+. +. ... . ......++.+|.||+|||..|...
T Consensus 243 ~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~~i~a~~VILATGa~~r~~ 289 (985)
T TIGR01372 243 YDH-NTVGALERVTDHLDAPPKGVPRERLWRIRAKRVVLATGAHERPL 289 (985)
T ss_pred ecC-CeEEEEEEeeeccccccCCccccceEEEEcCEEEEcCCCCCcCC
Confidence 432 2111 11 000 0 001122689999999999988654
No 412
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism]
Probab=97.25 E-value=0.0016 Score=62.06 Aligned_cols=35 Identities=29% Similarity=0.482 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
...+||+|||||.+|-+.|+.|+|.|.+|.+|||+
T Consensus 43 ~~~~DvIIVGAGV~GsaLa~~L~kdGRrVhVIERD 77 (509)
T KOG1298|consen 43 DGAADVIIVGAGVAGSALAYALAKDGRRVHVIERD 77 (509)
T ss_pred CCcccEEEECCcchHHHHHHHHhhCCcEEEEEecc
Confidence 45689999999999999999999999999999994
No 413
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
Probab=97.25 E-value=0.00047 Score=69.59 Aligned_cols=89 Identities=34% Similarity=0.430 Sum_probs=70.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS 284 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~ 284 (507)
+++|.|||+|+.|+.+|..|++.|+.||++++.+... | .+++++.+...+.|++.|++|+.++++-.
T Consensus 123 g~~VaviGaGPAGl~~a~~L~~~G~~Vtv~e~~~~~GGll~yGIP~~kl~k~i~d~~i~~l~~~Gv~~~~~~~vG~---- 198 (457)
T COG0493 123 GKKVAVIGAGPAGLAAADDLSRAGHDVTVFERVALDGGLLLYGIPDFKLPKDILDRRLELLERSGVEFKLNVRVGR---- 198 (457)
T ss_pred CCEEEEECCCchHhhhHHHHHhCCCeEEEeCCcCCCceeEEecCchhhccchHHHHHHHHHHHcCeEEEEcceECC----
Confidence 5899999999999999999999999999999887752 2 45678888999999999999999887631
Q ss_pred CCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 285 GDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 285 ~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.++++ ...-+.|.|++++|..-
T Consensus 199 ----~it~~------~L~~e~Dav~l~~G~~~ 220 (457)
T COG0493 199 ----DITLE------ELLKEYDAVFLATGAGK 220 (457)
T ss_pred ----cCCHH------HHHHhhCEEEEeccccC
Confidence 12221 12334599999999643
No 414
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.24 E-value=0.001 Score=70.14 Aligned_cols=91 Identities=24% Similarity=0.315 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceE-EEE
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKV-VGV 281 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v-~~i 281 (507)
..+++|+|||+|++|+.+|..+++.|.+|+++++.+.+. + .++.++...-.+.+++.|++++.++.+ ..+
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~~ 214 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGEDI 214 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCcC
Confidence 347899999999999999999999999999999776542 1 234455555556677889999888765 222
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+ .....+|.|++|+|..+.
T Consensus 215 ~~~---------------~~~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 215 TLE---------------QLEGEFDAVFVAIGAQLG 235 (564)
T ss_pred CHH---------------HHHhhCCEEEEeeCCCCC
Confidence 110 011247999999998754
No 415
>PRK06481 fumarate reductase flavoprotein subunit; Validated
Probab=97.22 E-value=0.0063 Score=63.24 Aligned_cols=105 Identities=16% Similarity=0.253 Sum_probs=73.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-------C--------------------------------CC-
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-------S--------------------------------MD- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~--------------------------------~d- 254 (507)
-.|+|||+|..|+-.|..+++.|.+|.++++.+.... . .+
T Consensus 62 ~DVvVVG~G~AGl~AAi~Aa~~Ga~VivlEK~~~~GG~s~~s~Gg~~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~~~d~ 141 (506)
T PRK06481 62 YDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKAQGIADSNDKFYEETLKGGGGTNDK 141 (506)
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccCCccccCChHHHHhcCCCCCHHHHHHHHHHhcCCCCCH
Confidence 3699999999999999999999999999987654210 0 00
Q ss_pred ------------------------------------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCC
Q 010573 255 ------------------------------------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD 286 (507)
Q Consensus 255 ------------------------------------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~ 286 (507)
..+...+.+.+++.|++++++++++++..+++
T Consensus 142 ~l~~~~~~~s~~~i~wl~~~Gv~~~~~~~~~g~~~~r~~~p~~g~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~g 221 (506)
T PRK06481 142 ALLRYFVDNSASAIDWLDSMGIKLDNLTITGGMSEKRTHRPHDGSAVGGYLVDGLLKNVQERKIPLFVNADVTKITEKDG 221 (506)
T ss_pred HHHHHHHhccHHHHHHHHHcCceEeecccCCCCCCCceeccCCCCCChHHHHHHHHHHHHHcCCeEEeCCeeEEEEecCC
Confidence 01233445556678999999999999986665
Q ss_pred eEE-EEEeecCCCceEEEEcCEEEEeec-CCCCCCC
Q 010573 287 GVK-LTLEPAAGGEKTILEADVVLVSAG-RTPFTAG 320 (507)
Q Consensus 287 ~v~-v~~~~~~~g~~~~i~~D~vi~a~G-~~p~~~~ 320 (507)
.+. +.+.. .+++...+.++.||+|+| +.+|.+.
T Consensus 222 ~V~Gv~~~~-~~g~~~~i~a~~VVlAtGG~~~n~~m 256 (506)
T PRK06481 222 KVTGVKVKI-NGKETKTISSKAVVVTTGGFGANKDM 256 (506)
T ss_pred EEEEEEEEe-CCCeEEEEecCeEEEeCCCcccCHHH
Confidence 543 44432 222345799999999997 6666543
No 416
>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism]
Probab=97.22 E-value=0.00038 Score=67.14 Aligned_cols=40 Identities=38% Similarity=0.475 Sum_probs=35.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--cEEEEecCCCCCcee
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTC 82 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~ 82 (507)
.++|+|+|||.+||++|++|++++. .|+|+|+.+++||..
T Consensus 11 ~~~vaVvGGGiSGL~aay~L~r~~p~~~i~l~Ea~~RvGGwi 52 (491)
T KOG1276|consen 11 GMTVAVVGGGISGLCAAYYLARLGPDVTITLFEASPRVGGWI 52 (491)
T ss_pred cceEEEECCchhHHHHHHHHHhcCCCceEEEEecCCccccee
Confidence 4689999999999999999999965 467799999999954
No 417
>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism]
Probab=97.22 E-value=0.00042 Score=67.20 Aligned_cols=57 Identities=33% Similarity=0.542 Sum_probs=48.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhh
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSS 97 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~ 97 (507)
...||++|||+|.-|+.||..|+|.|.+|+++|++...||-......+|...+....
T Consensus 12 ~~~ydavvig~GhnGL~aaayl~r~g~~V~vlerrhv~gGaavteeivpGfKfsr~s 68 (561)
T KOG4254|consen 12 KPEYDAVVIGGGHNGLTAAAYLARYGQSVAVLERRHVIGGAAVTEEIVPGFKFSRAS 68 (561)
T ss_pred CcccceEEecCCccchhHHHHHHhcCcceEEEEEeeecCcceeeehhccccccchHH
Confidence 457999999999999999999999999999999988899988887777754443333
No 418
>PRK13984 putative oxidoreductase; Provisional
Probab=97.21 E-value=0.001 Score=70.88 Aligned_cols=90 Identities=30% Similarity=0.325 Sum_probs=67.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+... + .+.+++.....+.+++.|++++.++.+..-
T Consensus 282 ~~~~v~IIGaG~aGl~aA~~L~~~G~~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~-- 359 (604)
T PRK13984 282 KNKKVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGKD-- 359 (604)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCCc--
Confidence 47899999999999999999999999999998876541 1 234455555567788899999998877320
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.++ .....+|.||+|+|..+
T Consensus 360 ------~~~~------~~~~~yD~vilAtGa~~ 380 (604)
T PRK13984 360 ------IPLE------ELREKHDAVFLSTGFTL 380 (604)
T ss_pred ------CCHH------HHHhcCCEEEEEcCcCC
Confidence 1111 12357999999999764
No 419
>KOG2960 consensus Protein involved in thiamine biosynthesis and DNA damage tolerance [General function prediction only]
Probab=97.21 E-value=0.00018 Score=62.54 Aligned_cols=46 Identities=39% Similarity=0.498 Sum_probs=37.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceecccccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCI 88 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~ 88 (507)
..||+|||+|.+|++||+..++. +.+|++||..-.+||-.+.-|..
T Consensus 76 esDvviVGAGSaGLsAAY~I~~~rPdlkvaIIE~SVaPGGGaWLGGQL 123 (328)
T KOG2960|consen 76 ESDVVIVGAGSAGLSAAYVIAKNRPDLKVAIIESSVAPGGGAWLGGQL 123 (328)
T ss_pred ccceEEECCCccccceeeeeeccCCCceEEEEEeeecCCCcccccchh
Confidence 46999999999999999999855 78999999976777654444443
No 420
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Probab=97.14 E-value=0.0014 Score=71.12 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
..+++|+|||+|+.|+.+|..|++.|.+||+++..
T Consensus 381 ~tgKKVaVVGaGPAGLsAA~~La~~Gh~Vtv~E~~ 415 (1028)
T PRK06567 381 PTNYNILVTGLGPAGFSLSYYLLRSGHNVTAIDGL 415 (1028)
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCCCeEEEEccc
Confidence 35799999999999999999999999999999975
No 421
>PF13454 NAD_binding_9: FAD-NAD(P)-binding
Probab=97.13 E-value=0.0069 Score=52.07 Aligned_cols=41 Identities=20% Similarity=0.439 Sum_probs=31.8
Q ss_pred CcEEE-cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecC
Q 010573 269 KMKFM-LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 269 Gv~i~-~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
|+++. ...+|+.+...+++..+.+. ++..+.+|.||+|+|.
T Consensus 114 ~i~v~~~~~~V~~i~~~~~~~~v~~~-----~g~~~~~d~VvLa~Gh 155 (156)
T PF13454_consen 114 GITVRHVRAEVVDIRRDDDGYRVVTA-----DGQSIRADAVVLATGH 155 (156)
T ss_pred CcEEEEEeeEEEEEEEcCCcEEEEEC-----CCCEEEeCEEEECCCC
Confidence 54444 35688999888888777765 5678999999999996
No 422
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent [].; PDB: 2PYX_B 2OAL_B 2E4G_A 2OAM_A 2OA1_B 2O9Z_A 3I3L_A 2AQJ_A 2ARD_A 2JKC_A ....
Probab=97.12 E-value=0.0053 Score=62.63 Aligned_cols=57 Identities=26% Similarity=0.466 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeE--EEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v--~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
...+.+.+..++.||+++.++ |..+..++++. .|++. +++++.+|.+|-|+|++...
T Consensus 155 ~fd~~L~~~A~~~Gv~~~~g~-V~~v~~~~~g~i~~v~~~-----~g~~i~ad~~IDASG~~s~L 213 (454)
T PF04820_consen 155 KFDQFLRRHAEERGVEVIEGT-VVDVELDEDGRITAVRLD-----DGRTIEADFFIDASGRRSLL 213 (454)
T ss_dssp HHHHHHHHHHHHTT-EEEET--EEEEEE-TTSEEEEEEET-----TSEEEEESEEEE-SGGG-CC
T ss_pred HHHHHHHHHHhcCCCEEEeCE-EEEEEEcCCCCEEEEEEC-----CCCEEEEeEEEECCCccchh
Confidence 455566777778899999875 66666555543 35543 56799999999999987654
No 423
>TIGR00136 gidA glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137).
Probab=97.12 E-value=0.007 Score=62.84 Aligned_cols=96 Identities=23% Similarity=0.384 Sum_probs=64.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc---CC---------------C-------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI---VP---------------S------------------------- 252 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---~~---------------~------------------------- 252 (507)
.|+|||+|+.|+++|..+++.|.+|.++++.... ++ .
T Consensus 2 DViVIGaG~AGl~aA~ala~~G~~v~Lie~~~~~~g~~~c~ps~gG~a~g~l~rEidaLGG~~~~~~d~~~i~~r~ln~s 81 (617)
T TIGR00136 2 DVIVIGGGHAGCEAALAAARMGAKTLLLTLNLDTIGKCSCNPAIGGPAKGILVKEIDALGGLMGKAADKAGLQFRVLNSS 81 (617)
T ss_pred eEEEECccHHHHHHHHHHHHCCCCEEEEecccccccCCCccccccccccchhhhhhhcccchHHHHHHhhceeheecccC
Confidence 4899999999999999999999999999865311 00 0
Q ss_pred -----------CCH-HHHHHHHHHHHhc-CcEEEcCceEEEEEEc-CCeE-EEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 -----------MDG-EIRKQFQRSLEKQ-KMKFMLKTKVVGVDLS-GDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 -----------~d~-~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~-~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+|+ .+...+.+.+++. ++.++.+ .++.+..+ ++.+ .|.+. ++..+.+|.||+|+|...+
T Consensus 82 kgpAV~~~RaQVDr~~y~~~L~e~Le~~pgV~Ile~-~Vv~li~e~~g~V~GV~t~-----~G~~I~Ad~VILATGtfL~ 155 (617)
T TIGR00136 82 KGPAVRATRAQIDKVLYRKAMRNALENQPNLSLFQG-EVEDLILEDNDEIKGVVTQ-----DGLKFRAKAVIITTGTFLR 155 (617)
T ss_pred CCCcccccHHhCCHHHHHHHHHHHHHcCCCcEEEEe-EEEEEEEecCCcEEEEEEC-----CCCEEECCEEEEccCcccC
Confidence 011 1122344555555 7888754 56666443 3333 35543 4558999999999998753
No 424
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase. This model represents an orthologous set of proteins present in relatively few bacteria but very tightly conserved where it occurs. It is closely related to gidA (glucose-inhibited division protein A), which appears to be present in all complete eubacterial genomes so far and in Saccharomyces cerevisiae. It was designated gid but is now recognized as a tRNA:m(5)U-54 methyltransferase and is now designated trmFO.
Probab=97.11 E-value=0.0015 Score=65.09 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=31.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
+|+|||||..|+|+|..|++.|.+|+++++++..
T Consensus 2 ~VvVIGgGlAGleaA~~LAr~G~~V~LiE~rp~~ 35 (433)
T TIGR00137 2 PVHVIGGGLAGSEAAWQLAQAGVPVILYEMRPEK 35 (433)
T ss_pred CEEEECCCHHHHHHHHHHHhCCCcEEEEeccccc
Confidence 6899999999999999999999999999987764
No 425
>PRK02106 choline dehydrogenase; Validated
Probab=97.09 E-value=0.00058 Score=71.92 Aligned_cols=36 Identities=28% Similarity=0.462 Sum_probs=32.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHH-CCCcEEEEecCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRG 76 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~ 76 (507)
...||+||||+|+||..+|.+|++ .|++|+|+|+.+
T Consensus 3 ~~~~D~iIVG~G~aG~vvA~rLae~~g~~VlvlEaG~ 39 (560)
T PRK02106 3 TMEYDYIIIGAGSAGCVLANRLSEDPDVSVLLLEAGG 39 (560)
T ss_pred CCcCcEEEECCcHHHHHHHHHHHhCCCCeEEEecCCC
Confidence 345899999999999999999999 799999999964
No 426
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K.
Probab=97.09 E-value=0.018 Score=51.12 Aligned_cols=106 Identities=21% Similarity=0.201 Sum_probs=66.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-------CCC-------------------------------H
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-------SMD-------------------------------G 255 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~~d-------------------------------~ 255 (507)
...|+|||+|++|+-+|..|++.|.+|.+++++..+.. .|. .
T Consensus 17 ~~DV~IVGaGpaGl~aA~~La~~g~kV~v~E~~~~~GGg~~~Gg~lf~~iVVq~~a~~iL~elgi~y~~~~~g~~v~d~~ 96 (230)
T PF01946_consen 17 EYDVAIVGAGPAGLTAAYYLAKAGLKVAVIERKLSPGGGMWGGGMLFNKIVVQEEADEILDELGIPYEEYGDGYYVADSV 96 (230)
T ss_dssp EESEEEE--SHHHHHHHHHHHHHTS-EEEEESSSS-BTTTTS-CTT---EEEETTTHHHHHHHT---EE-SSEEEES-HH
T ss_pred cCCEEEECCChhHHHHHHHHHHCCCeEEEEecCCCCCccccccccccchhhhhhhHHHHHHhCCceeEEeCCeEEEEcHH
Confidence 35699999999999999999999999999998765421 111 1
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcC-CeEE-EEEee----cC--CCceEEEEcCEEEEeecCCCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSG-DGVK-LTLEP----AA--GGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~-v~~~~----~~--~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+....+....-+.|++++..+.+..+-..+ +++. +.+.- .. .-|.-.+.+..||-|||.....-
T Consensus 97 ~~~s~L~s~a~~aGakifn~~~vEDvi~r~~~rV~GvViNWt~V~~~glHvDPl~i~ak~ViDaTGHda~v~ 168 (230)
T PF01946_consen 97 EFTSTLASKAIDAGAKIFNLTSVEDVIVREDDRVAGVVINWTPVEMAGLHVDPLTIRAKVVIDATGHDAEVV 168 (230)
T ss_dssp HHHHHHHHHHHTTTEEEEETEEEEEEEEECSCEEEEEEEEEHHHHTT--T-B-EEEEESEEEE---SSSSST
T ss_pred HHHHHHHHHHhcCCCEEEeeeeeeeeEEEcCCeEEEEEEEehHHhHhhcCCCcceEEEeEEEeCCCCchHHH
Confidence 233333333445899999999998876555 5554 33220 00 12456899999999999877654
No 427
>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism]
Probab=97.06 E-value=0.0053 Score=62.72 Aligned_cols=59 Identities=17% Similarity=0.212 Sum_probs=44.5
Q ss_pred CCHH-HHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 MDGE-IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 ~d~~-~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+||. +-+.+....++.|..++.++.|+++....++.. |++ ....+++..+|-|+|+...
T Consensus 184 ~DP~~lC~ala~~A~~~GA~viE~cpV~~i~~~~~~~~gVeT------~~G~iet~~~VNaaGvWAr 244 (856)
T KOG2844|consen 184 MDPAGLCQALARAASALGALVIENCPVTGLHVETDKFGGVET------PHGSIETECVVNAAGVWAR 244 (856)
T ss_pred cCHHHHHHHHHHHHHhcCcEEEecCCcceEEeecCCccceec------cCcceecceEEechhHHHH
Confidence 4554 556677788899999999999999976655443 443 2347999999999998763
No 428
>PLN02985 squalene monooxygenase
Probab=97.05 E-value=0.0089 Score=62.02 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=30.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 43 ~~DViIVGAG~aGlalA~aLa~~G~~V~vlEr~~ 76 (514)
T PLN02985 43 ATDVIIVGAGVGGSALAYALAKDGRRVHVIERDL 76 (514)
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCeEEEEECcC
Confidence 3469999999999999999999999999999864
No 429
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=97.05 E-value=0.0072 Score=63.88 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
..+.+|+|||||..|+-+|..|.+.|.+|+++++.+
T Consensus 79 ~~~~~VlIVGgGIaGLalAlaL~r~Gi~V~V~Er~~ 114 (668)
T PLN02927 79 KKKSRVLVAGGGIGGLVFALAAKKKGFDVLVFEKDL 114 (668)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhcCCeEEEEeccc
Confidence 346789999999999999999999999999999865
No 430
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=97.03 E-value=0.002 Score=58.55 Aligned_cols=95 Identities=20% Similarity=0.276 Sum_probs=67.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC----------CCC----------HHHHHHHHH------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----------SMD----------GEIRKQFQR------------ 263 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~~d----------~~~~~~~~~------------ 263 (507)
+|+|||+|..|+-+|..|+..|.+|++++++.-+.. .+| +-..+.++.
T Consensus 3 siaIVGaGiAGl~aA~~L~~aG~~vtV~eKg~GvGGRlAtRRl~~g~~DhGAqYfk~~~~~F~~~Ve~~~~~glV~~W~~ 82 (331)
T COG3380 3 SIAIVGAGIAGLAAAYALREAGREVTVFEKGRGVGGRLATRRLDGGRFDHGAQYFKPRDELFLRAVEALRDDGLVDVWTP 82 (331)
T ss_pred cEEEEccchHHHHHHHHHHhcCcEEEEEEcCCCcccchheeccCCccccccceeecCCchHHHHHHHHHHhCCceeeccc
Confidence 689999999999999999999999999998765421 111 111111111
Q ss_pred -----------------------------HHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecC
Q 010573 264 -----------------------------SLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 264 -----------------------------~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
.+-....++.++++|+++...++..+++.++ .++..++|.|++++..
T Consensus 83 ~~~~~~~~~~~~~~d~~pyvg~pgmsalak~LAtdL~V~~~~rVt~v~~~~~~W~l~~~~----g~~~~~~d~vvla~PA 158 (331)
T COG3380 83 AVWTFTGDGSPPRGDEDPYVGEPGMSALAKFLATDLTVVLETRVTEVARTDNDWTLHTDD----GTRHTQFDDVVLAIPA 158 (331)
T ss_pred cccccccCCCCCCCCCCccccCcchHHHHHHHhccchhhhhhhhhhheecCCeeEEEecC----CCcccccceEEEecCC
Confidence 1122355677888899988888888888742 4467899999999865
No 431
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
Probab=96.97 E-value=0.0021 Score=63.18 Aligned_cols=80 Identities=20% Similarity=0.275 Sum_probs=60.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-------CCHH------HHHHHHHHHHhcCcEEEcCceEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-------MDGE------IRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------~d~~------~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.++++|||||..|++.|..|++.|.+|+++++.+.+... |+.. +.-.+.+.-...+|++++.++|++
T Consensus 124 ~~svLVIGGGvAGitAAl~La~~G~~v~LVEKepsiGGrmak~~k~FP~~dcs~C~LaP~m~~v~~hp~i~l~TyaeV~e 203 (622)
T COG1148 124 SKSVLVIGGGVAGITAALELADMGFKVYLVEKEPSIGGRMAKLNKTFPTNDCSICILAPKMVEVSNHPNIELITYAEVEE 203 (622)
T ss_pred ccceEEEcCcHHHHHHHHHHHHcCCeEEEEecCCcccccHHhhhccCCCcccchhhccchhhhhccCCceeeeeeeeeee
Confidence 689999999999999999999999999999999877321 2211 112222333445899999999999
Q ss_pred EEEcCCeEEEEEe
Q 010573 281 VDLSGDGVKLTLE 293 (507)
Q Consensus 281 i~~~~~~v~v~~~ 293 (507)
+.+.-+..++.++
T Consensus 204 v~G~vGnF~vki~ 216 (622)
T COG1148 204 VSGSVGNFTVKIE 216 (622)
T ss_pred ecccccceEEEEe
Confidence 9877666666543
No 432
>TIGR03862 flavo_PP4765 uncharacterized flavoprotein, PP_4765 family. This model describes a sharply distinctive clade of proteins within the larger family of flavoproteins described by Pfam model pfam03486 and TIGRFAMs model TIGR00275. The function is unknown.
Probab=96.96 E-value=0.02 Score=56.36 Aligned_cols=119 Identities=12% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCcEEEEecCCCCC--------ceeccccccchhhhh----hhhHH---------HHHHHhhhhhCCcccCccccChHHH
Q 010573 66 GLKTTCIEKRGALG--------GTCLNVGCIPSKALL----HSSHM---------YHEAMHSFASHGVKFSSVEVDLPAM 124 (507)
Q Consensus 66 g~~V~lie~~~~~G--------G~~~~~~~~p~~~~~----~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~ 124 (507)
|.+|+|+|+++++| |.|+....-+...+. ....+ ......++.+.|+..... +..++
T Consensus 1 g~~V~ilEkn~~~GkKil~TG~GRCN~TN~~~~~~~~~~~~~~~~fl~~al~~f~~~d~~~fF~~~Gi~~~~e--~~grv 78 (376)
T TIGR03862 1 GLEVDVFEAKPSVGRKFLMAGKSGLNLTHSEPLPRFIERYGDAAEWLAPWLEAFDAVALQDWARGLGIETFVG--SSGRV 78 (376)
T ss_pred CCeEEEEeCCCCccceeEEcCCCCcccCCCCchHHHHHhcCCchHHHHHHHHhCCHHHHHHHHHHCCCceEEC--CCCEE
Confidence 57899999998885 888766643211111 11111 234556677778753210 01112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC
Q 010573 125 MAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
++...+ ...+.+.+...+++.+|+++.+ .+..++.....+.+..+ ...+.+|+||||||+.+
T Consensus 79 fP~S~~-A~sVv~~L~~~l~~~gV~i~~~~~V~~i~~~~~~v~~~~~-~~~~~a~~vIlAtGG~s 141 (376)
T TIGR03862 79 FPVEMK-AAPLLRAWLKRLAEQGVQFHTRHRWIGWQGGTLRFETPDG-QSTIEADAVVLALGGAS 141 (376)
T ss_pred CCCCCC-HHHHHHHHHHHHHHCCCEEEeCCEEEEEeCCcEEEEECCC-ceEEecCEEEEcCCCcc
Confidence 221110 1233444556777899999988 45666554566665432 24689999999999864
No 433
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis]
Probab=96.92 E-value=0.0048 Score=57.69 Aligned_cols=36 Identities=33% Similarity=0.402 Sum_probs=32.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
..|-|||||.||-.||++++++|..|.|.|-++.-+
T Consensus 4 ~~i~VIGaGLAGSEAAwqiA~~Gv~V~L~EMRp~k~ 39 (439)
T COG1206 4 QPINVIGAGLAGSEAAWQIAKRGVPVILYEMRPVKG 39 (439)
T ss_pred CceEEEcccccccHHHHHHHHcCCcEEEEEcccccC
Confidence 468999999999999999999999999999865443
No 434
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase.
Probab=96.88 E-value=0.019 Score=60.62 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=37.0
Q ss_pred HHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 263 RSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 263 ~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.+++.||+++.++.++++..+++.+. +...+..++....+.++.||+|+|-..
T Consensus 137 ~~~~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGG~~ 191 (566)
T TIGR01812 137 EQCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLKTGEIVFFRAKAVVLATGGYG 191 (566)
T ss_pred HHHHHcCCEEEeccEEEEEEEeCCEEEEEEEEECCCCcEEEEECCeEEECCCccc
Confidence 344556899999999999876666554 333232334445789999999999543
No 435
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.83 E-value=0.02 Score=61.06 Aligned_cols=51 Identities=16% Similarity=0.277 Sum_probs=36.7
Q ss_pred HHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 264 SLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 264 ~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
.+++.||+++.++.++++..+++.+. +.+.+..++....+.++.||+|||-
T Consensus 179 ~~~~~gV~i~~~t~v~~Li~d~g~V~GV~~~~~~~g~~~~i~AkaVVLATGG 230 (640)
T PRK07573 179 QIAAGTVKMYTRTEMLDLVVVDGRARGIVARNLVTGEIERHTADAVVLATGG 230 (640)
T ss_pred HHHhcCCEEEeceEEEEEEEeCCEEEEEEEEECCCCcEEEEECCEEEECCCC
Confidence 45567899999999999876555554 4444333444457899999999985
No 436
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.80 E-value=0.024 Score=59.76 Aligned_cols=54 Identities=7% Similarity=0.046 Sum_probs=37.6
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
+.+.+++.||+++.++.++++..+++.+. +...+..++....+.++.||+|||-
T Consensus 142 L~~~~~~~gv~i~~~~~~~~Li~~~g~v~Gv~~~~~~~g~~~~i~AkaVVLATGG 196 (566)
T PRK06452 142 LFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGG 196 (566)
T ss_pred HHHHHHhCCCEEEeCcEEEEEEEECCEEEEEEEEECCCCeEEEEEeCeEEECCCc
Confidence 44445556889999999998876666554 4444333444457899999999994
No 437
>TIGR01813 flavo_cyto_c flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton.
Probab=96.74 E-value=0.027 Score=57.49 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=37.6
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEEcC-CeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDLSG-DGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+.+.+++.|++++++++++++..++ +.+. +.+.+ .++....+.++.||+|+|-..
T Consensus 135 ~l~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~~~a~~VVlAtGg~~ 192 (439)
T TIGR01813 135 KLYKKAKKEGIDTRLNSKVEDLIQDDQGTVVGVVVKG-KGKGIYIKAAKAVVLATGGFG 192 (439)
T ss_pred HHHHHHHHcCCEEEeCCEeeEeEECCCCcEEEEEEEe-CCCeEEEEecceEEEecCCCC
Confidence 34455667899999999999998754 3333 44432 222334578999999999433
No 438
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=96.62 E-value=0.022 Score=56.61 Aligned_cols=32 Identities=41% Similarity=0.631 Sum_probs=28.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 2 dv~IIG~Gi~G~s~A~~L~~~G~~V~vle~~~ 33 (365)
T TIGR03364 2 DLIIVGAGILGLAHAYAAARRGLSVTVIERSS 33 (365)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 48899999999999999999999999988653
No 439
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=96.60 E-value=0.02 Score=50.64 Aligned_cols=100 Identities=21% Similarity=0.265 Sum_probs=72.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc--------Ccc--------CCC-----CCHHHHHHHHHHHHhcCcE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA--------ADI--------VPS-----MDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~--------~~~--------~~~-----~d~~~~~~~~~~l~~~Gv~ 271 (507)
...+|+|||+|+.+.-.|..+++...+..+++.. .++ .|. ..+++.+.++++-++.|.+
T Consensus 7 h~e~v~IiGSGPAa~tAAiYaaraelkPllfEG~~~~~i~pGGQLtTTT~veNfPGFPdgi~G~~l~d~mrkqs~r~Gt~ 86 (322)
T KOG0404|consen 7 HNENVVIIGSGPAAHTAAIYAARAELKPLLFEGMMANGIAPGGQLTTTTDVENFPGFPDGITGPELMDKMRKQSERFGTE 86 (322)
T ss_pred eeeeEEEEccCchHHHHHHHHhhcccCceEEeeeeccCcCCCceeeeeeccccCCCCCcccccHHHHHHHHHHHHhhcce
Confidence 3568999999999999998888886655555421 111 122 3478888888888899999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+++ ..|.++........+.. +.+.+.+|.||+|+|.....-
T Consensus 87 i~t-EtVskv~~sskpF~l~t------d~~~v~~~avI~atGAsAkRl 127 (322)
T KOG0404|consen 87 IIT-ETVSKVDLSSKPFKLWT------DARPVTADAVILATGASAKRL 127 (322)
T ss_pred eee-eehhhccccCCCeEEEe------cCCceeeeeEEEecccceeee
Confidence 884 56777766666666654 456899999999999776543
No 440
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes.
Probab=96.59 E-value=0.035 Score=58.89 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=26.9
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 217 LVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 217 vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
|+|||+|..|+-.|..+++.|.+|.++++.+
T Consensus 1 VlVVG~G~AGl~AAl~Aae~G~~VilleK~~ 31 (603)
T TIGR01811 1 VIVVGTGLAGGMAAAKLAELGYHVKLFSYVD 31 (603)
T ss_pred CEEECccHHHHHHHHHHHHcCCCEEEEEecC
Confidence 5899999999999999988899999888765
No 441
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]
Probab=96.58 E-value=0.0023 Score=66.74 Aligned_cols=61 Identities=23% Similarity=0.355 Sum_probs=43.5
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCC-ceEEEEcCEEEEeecCCCCCCCC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGG-EKTILEADVVLVSAGRTPFTAGL 321 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g-~~~~i~~D~vi~a~G~~p~~~~l 321 (507)
+...++..++.+.+++.++.+..++++.+ +++.....+ .......+.||+|.|...+..+|
T Consensus 209 l~~a~~~~nl~v~t~a~v~ri~~~~~r~~gv~~~~~~~~~~~~~~a~~~viL~AGai~Sp~LL 271 (542)
T COG2303 209 LKPALKRPNLTLLTGARVRRILLEGDRAVGVEVEIGDGGTIETAVAAREVVLAAGAINSPKLL 271 (542)
T ss_pred chhHhcCCceEEecCCEEEEEEEECCeeEEEEEEeCCCCceEEEecCceEEEeccccCCHHHH
Confidence 44456778899999999999998877655 555432222 24456789999999987765543
No 442
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.52 E-value=0.046 Score=58.30 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=30.9
Q ss_pred cEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 270 MKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 270 v~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
|+++.++.++++..+++.+. +...+..++....+.++.||+|+|-
T Consensus 166 v~i~~~~~v~~L~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVlATGG 211 (626)
T PRK07803 166 IKVFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGG 211 (626)
T ss_pred eEEEeCCEEEEEEEECCEEEEEEEEECCCCeEEEEEcCeEEECCCc
Confidence 88888888888876555443 3222223444457899999999995
No 443
>PRK08401 L-aspartate oxidase; Provisional
Probab=96.52 E-value=0.035 Score=57.10 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=29.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
..|+|||+|..|+-.|..+++.|.+|.++++.
T Consensus 2 ~DVvVVGaG~AGl~AAi~aae~G~~V~liek~ 33 (466)
T PRK08401 2 MKVGIVGGGLAGLTAAISLAKKGFDVTIIGPG 33 (466)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999998874
No 444
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=96.52 E-value=0.0013 Score=65.27 Aligned_cols=43 Identities=42% Similarity=0.562 Sum_probs=38.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
..+||+|||||..|..+|.-++-+|++++|||+++.-.|+.+.
T Consensus 66 ~~fDVLIIGGGAtGaGcALDA~TRGLktaLVE~~DF~SGTSSk 108 (680)
T KOG0042|consen 66 HEFDVLIIGGGATGAGCALDAATRGLKTALVEAGDFASGTSSK 108 (680)
T ss_pred CcccEEEECCCccCcceeehhhcccceeEEEecccccCCcccc
Confidence 4599999999999999999999999999999998877777543
No 445
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.52 E-value=0.038 Score=58.41 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=38.0
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.+.+++.||+++.++.++++..+++.+. +...+..++....+.++.||+|+|-..
T Consensus 141 L~~~~~~~gi~i~~~t~v~~L~~~~g~v~Gv~~~~~~~g~~~~i~AkaVVlATGG~~ 197 (575)
T PRK05945 141 LVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYG 197 (575)
T ss_pred HHHHHhhCCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCeEEEEECCEEEECCCCCc
Confidence 44455667899999999999876555443 332222334445789999999999654
No 446
>PRK06854 adenylylsulfate reductase subunit alpha; Validated
Probab=96.45 E-value=0.057 Score=57.37 Aligned_cols=52 Identities=10% Similarity=0.124 Sum_probs=34.8
Q ss_pred HHHHhcC-cEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 263 RSLEKQK-MKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 263 ~~l~~~G-v~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
+.+++.+ |+++.++.++++..+++.+. +...+..++....+.++.||+|+|-
T Consensus 140 ~~a~~~ggV~i~~~~~v~~Li~~~g~v~Gv~~~~~~~g~~~~i~AkaVILATGG 193 (608)
T PRK06854 140 EAAKKALGDNVLNRVFITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGG 193 (608)
T ss_pred HHHHhcCCCEEEeCCEEEEEEEeCCEEEEEEEEEccCCcEEEEECCEEEECCCc
Confidence 3444554 99999999999875555443 3222222334457899999999994
No 447
>TIGR00551 nadB L-aspartate oxidase. L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA.
Probab=96.43 E-value=0.052 Score=56.22 Aligned_cols=56 Identities=9% Similarity=0.117 Sum_probs=38.4
Q ss_pred HHHHHHHHh-cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 259 KQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 259 ~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+.+.+++ .||+++.++.++++..+++.+. +.+.+. +....+.++.||+|+|-..
T Consensus 132 ~~L~~~~~~~~gi~i~~~~~v~~l~~~~g~v~Gv~~~~~--~~~~~i~A~~VVlAtGG~~ 189 (488)
T TIGR00551 132 TTLVKKALNHPNIRIIEGENALDLLIETGRVVGVWVWNR--ETVETCHADAVVLATGGAG 189 (488)
T ss_pred HHHHHHHHhcCCcEEEECeEeeeeeccCCEEEEEEEEEC--CcEEEEEcCEEEECCCccc
Confidence 334455555 5899999999999876555554 444321 2235789999999999654
No 448
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=96.41 E-value=0.0053 Score=44.29 Aligned_cols=31 Identities=39% Similarity=0.512 Sum_probs=28.5
Q ss_pred EEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 219 VIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 219 VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 1 IiGaG~sGl~aA~~L~~~g~~v~v~E~~~~~ 31 (68)
T PF13450_consen 1 IIGAGISGLAAAYYLAKAGYRVTVFEKNDRL 31 (68)
T ss_dssp EES-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEeeCHHHHHHHHHHHHCCCcEEEEecCccc
Confidence 8999999999999999999999999998875
No 449
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.39 E-value=0.049 Score=57.21 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCe-EE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~-v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
++...+.+.+++.||++++++.++++..++++ +. +...+..++....+.++.||+|||--.
T Consensus 135 ~i~~~L~~~~~~~gv~i~~~t~v~~Li~~~~~~v~Gv~~~~~~~g~~~~i~AkaVIlATGG~~ 197 (543)
T PRK06263 135 EMMMGLMEYLIKERIKILEEVMAIKLIVDENREVIGAIFLDLRNGEIFPIYAKATILATGGAG 197 (543)
T ss_pred HHHHHHHHHHhcCCCEEEeCeEeeeeEEeCCcEEEEEEEEECCCCcEEEEEcCcEEECCCCCC
Confidence 34444556666789999999999998765544 43 343332344445789999999999644
No 450
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion]
Probab=96.38 E-value=0.021 Score=59.42 Aligned_cols=100 Identities=19% Similarity=0.259 Sum_probs=73.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC---CeeEEEcccCccC-------CCCC-----HHHHHHHHHHHHhcCcEEEcCceE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG---SEVTVVEFAADIV-------PSMD-----GEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g---~~Vtlv~~~~~~~-------~~~d-----~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..+++|||.|..|.-+...+.+.. .+||++...++.- +.+. +++.-.-.++.+++||+++.+.++
T Consensus 3 k~klvvvGnGmag~r~iEell~~~~~~~~iTvfg~Ep~~nY~Ri~Ls~vl~~~~~~edi~l~~~dwy~~~~i~L~~~~~v 82 (793)
T COG1251 3 KQKLVIIGNGMAGHRTIEELLESAPDLYDITVFGEEPRPNYNRILLSSVLAGEKTAEDISLNRNDWYEENGITLYTGEKV 82 (793)
T ss_pred ceeEEEEecccchhhHHHHHHhcCcccceEEEeccCCCccccceeeccccCCCccHHHHhccchhhHHHcCcEEEcCCee
Confidence 357999999999999988888743 4688876554431 1111 234444467889999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.+..++.. |+.+ .+.++.+|.+|+|||..|....
T Consensus 83 ~~idr~~k~--V~t~-----~g~~~~YDkLilATGS~pfi~P 117 (793)
T COG1251 83 IQIDRANKV--VTTD-----AGRTVSYDKLIIATGSYPFILP 117 (793)
T ss_pred EEeccCcce--EEcc-----CCcEeecceeEEecCccccccC
Confidence 999665543 3322 6789999999999999998765
No 451
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only]
Probab=96.31 E-value=0.058 Score=50.98 Aligned_cols=56 Identities=18% Similarity=0.189 Sum_probs=40.6
Q ss_pred HHHHHHHHHhcCcEEEcCceEEEEEEc---CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 258 RKQFQRSLEKQKMKFMLKTKVVGVDLS---GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 258 ~~~~~~~l~~~Gv~i~~~~~v~~i~~~---~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.++..+++.|+.++.+..++.++.. +..+.|.+. ++..+.++.+|+++|-.-+.
T Consensus 156 lk~~~~~~~~~G~i~~dg~~v~~~~~~~e~~~~v~V~Tt-----~gs~Y~akkiI~t~GaWi~k 214 (399)
T KOG2820|consen 156 LKALQDKARELGVIFRDGEKVKFIKFVDEEGNHVSVQTT-----DGSIYHAKKIIFTVGAWINK 214 (399)
T ss_pred HHHHHHHHHHcCeEEecCcceeeEeeccCCCceeEEEec-----cCCeeecceEEEEecHHHHh
Confidence 344567778899999999998887632 334444443 56679999999999976554
No 452
>PRK08275 putative oxidoreductase; Provisional
Probab=96.30 E-value=0.076 Score=55.90 Aligned_cols=61 Identities=16% Similarity=0.212 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+...+.+.+++.|++++.++.++++..+ ++.+. +...+..++....+.++.||+|+|-..
T Consensus 138 ~i~~~L~~~~~~~gv~i~~~~~v~~Li~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VIlATGG~~ 200 (554)
T PRK08275 138 DIKKVLYRQLKRARVLITNRIMATRLLTDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAG 200 (554)
T ss_pred HHHHHHHHHHHHCCCEEEcceEEEEEEEcCCCeEEEEEEEecCCCcEEEEECCEEEECCCCcc
Confidence 34556666677789999999999999765 44443 333222334445689999999999754
No 453
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning]
Probab=96.30 E-value=0.0096 Score=59.77 Aligned_cols=31 Identities=29% Similarity=0.564 Sum_probs=27.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
.|+|||||..|+|.|.+.+|.|.++.++...
T Consensus 6 DVIVIGgGHAG~EAA~AaARmG~ktlLlT~~ 36 (621)
T COG0445 6 DVIVIGGGHAGVEAALAAARMGAKTLLLTLN 36 (621)
T ss_pred ceEEECCCccchHHHHhhhccCCeEEEEEcC
Confidence 6999999999999999999999998877644
No 454
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.30 E-value=0.071 Score=56.43 Aligned_cols=48 Identities=17% Similarity=0.237 Sum_probs=32.2
Q ss_pred cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 010573 268 QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.||+++.++.++++..+++.+. +...+..++....+.++.||+|+|-.
T Consensus 151 ~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~g~~~~i~Ak~VIlATGG~ 199 (577)
T PRK06069 151 DNIHFYDEHFVTSLIVENGVFKGVTAIDLKRGEFKVFQAKAGIIATGGA 199 (577)
T ss_pred CCCEEEECCEEEEEEEECCEEEEEEEEEcCCCeEEEEECCcEEEcCchh
Confidence 5788888888888865555443 33222223333468999999999965
No 455
>PLN02785 Protein HOTHEAD
Probab=96.26 E-value=0.0048 Score=64.89 Aligned_cols=34 Identities=29% Similarity=0.535 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
..||+||||||.||..+|.+|.+ +.+|+|+|+..
T Consensus 54 ~~yD~IIVG~G~aG~~lA~~Ls~-~~~VLllE~G~ 87 (587)
T PLN02785 54 SAYDYIVVGGGTAGCPLAATLSQ-NFSVLLLERGG 87 (587)
T ss_pred ccCCEEEECcCHHHHHHHHHHhc-CCcEEEEecCC
Confidence 46999999999999999999999 69999999953
No 456
>TIGR01810 betA choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified.
Probab=96.26 E-value=0.004 Score=65.25 Aligned_cols=32 Identities=31% Similarity=0.456 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHCC-CcEEEEecCC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRG 76 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~ 76 (507)
|+||||+|.||..+|.+|++.+ ++|+|+|+..
T Consensus 1 D~iIVG~G~aG~vvA~rLs~~~~~~VlvlEaG~ 33 (532)
T TIGR01810 1 DYIIIGGGSAGSVLAGRLSEDVSNSVLVLEAGG 33 (532)
T ss_pred CEEEECCCchHHHHHHHhccCCCCeEEEEecCC
Confidence 7999999999999999999998 7999999954
No 457
>PRK08626 fumarate reductase flavoprotein subunit; Provisional
Probab=96.22 E-value=0.074 Score=56.97 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=36.7
Q ss_pred HHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeec
Q 010573 263 RSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAG 313 (507)
Q Consensus 263 ~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G 313 (507)
+.+.+.||+++.++.++++..+++.+. +.+.+..++....+.++.||+|||
T Consensus 166 ~~~~~~gv~i~~~~~~~~Li~~~g~v~Gv~~~~~~~G~~~~i~AkaVVLATG 217 (657)
T PRK08626 166 NEAIKLGVPVHDRKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATG 217 (657)
T ss_pred HHHHhCCCEEEeeEEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 345567899999999999876665543 444333345556788999999998
No 458
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only]
Probab=96.18 E-value=0.026 Score=54.89 Aligned_cols=35 Identities=34% Similarity=0.554 Sum_probs=31.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.+|+|||||..|+-.|..|.+.|.+|.+++.+..+
T Consensus 3 ~~VvIvGgGI~Gla~A~~l~r~G~~v~VlE~~e~~ 37 (420)
T KOG2614|consen 3 PKVVIVGGGIVGLATALALHRKGIDVVVLESREDP 37 (420)
T ss_pred CcEEEECCcHHHHHHHHHHHHcCCeEEEEeecccc
Confidence 57999999999999999999999999999886554
No 459
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed
Probab=96.16 E-value=0.017 Score=63.12 Aligned_cols=33 Identities=39% Similarity=0.488 Sum_probs=30.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCc
Q 010573 216 KLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAAD 248 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~ 248 (507)
+|+|||+|+.|+-+|..|++. |.+|+++++.+.
T Consensus 2 ~V~IIGaGpAGLaaAi~L~~~~~G~~V~vlEr~~~ 36 (765)
T PRK08255 2 RIVCIGGGPAGLYFALLMKLLDPAHEVTVVERNRP 36 (765)
T ss_pred eEEEECCCHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence 689999999999999999998 899999998875
No 460
>PRK06175 L-aspartate oxidase; Provisional
Probab=96.11 E-value=0.089 Score=53.50 Aligned_cols=58 Identities=9% Similarity=0.161 Sum_probs=38.1
Q ss_pred HHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 257 IRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 257 ~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.+.+.+.+++ .||++++++.++++..+++.+. +.... ++....+.++.||+|+|--.
T Consensus 130 l~~~L~~~~~~~~gV~i~~~t~v~~Li~~~~~v~Gv~~~~--~g~~~~i~Ak~VILAtGG~~ 189 (433)
T PRK06175 130 VEKILLKKVKKRKNITIIENCYLVDIIENDNTCIGAICLK--DNKQINIYSKVTILATGGIG 189 (433)
T ss_pred HHHHHHHHHHhcCCCEEEECcEeeeeEecCCEEEEEEEEE--CCcEEEEEcCeEEEccCccc
Confidence 33444555544 5999999999999876555543 23222 22334689999999999643
No 461
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Probab=96.09 E-value=0.11 Score=55.42 Aligned_cols=56 Identities=9% Similarity=0.140 Sum_probs=36.7
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEE-cCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDL-SGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.+.+..++.||+++.++.++++.. +++.+. +...+..++....+.++.||+|||--
T Consensus 171 ~L~~~a~~~gv~i~~~~~~~~Li~~~~g~v~Gv~~~~~~~g~~~~i~AkaVVLATGG~ 228 (617)
T PTZ00139 171 TLYGQSLKYDCNFFIEYFALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGY 228 (617)
T ss_pred HHHHHHHhCCCEEEeceEEEEEEECCCCEEEEEEEEECCCCeEEEEECCcEEEeCCCC
Confidence 334445567888888888888765 344444 43333334555678999999999743
No 462
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B.
Probab=96.08 E-value=0.028 Score=54.99 Aligned_cols=104 Identities=16% Similarity=0.253 Sum_probs=60.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCcc-CC-C--CC------------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI-VP-S--MD------------------------------------ 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~-~~-~--~d------------------------------------ 254 (507)
.++.||.|+.++-+|..+...+ .++.++++.+.+ +. . ++
T Consensus 4 D~igIG~GP~nLslA~~l~~~~~~~~~f~e~~~~f~Wh~gmll~~~~~q~~fl~Dlvt~~~P~s~~sflnYL~~~~rl~~ 83 (341)
T PF13434_consen 4 DLIGIGFGPFNLSLAALLEEHGDLKALFLERRPSFSWHPGMLLPGARMQVSFLKDLVTLRDPTSPFSFLNYLHEHGRLYE 83 (341)
T ss_dssp SEEEE--SHHHHHHHHHHHHHH---EEEEES-SS--TTGGG--SS-B-SS-TTSSSSTTT-TTSTTSHHHHHHHTT-HHH
T ss_pred eEEEEeeCHHHHHHHHHhhhcCCCCEEEEecCCCCCcCCccCCCCCccccccccccCcCcCCCCcccHHHHHHHcCChhh
Confidence 4789999999999999998876 788888877764 11 0 00
Q ss_pred -----------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCC----eEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 255 -----------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD----GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 255 -----------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~----~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.+..+.++-..++..-.+..+.+|++|+..++ ...|++.+ .+|+++++.+..||+++|..|..+
T Consensus 84 f~~~~~~~p~R~ef~dYl~Wva~~~~~~v~~~~~V~~I~~~~~~~~~~~~V~~~~-~~g~~~~~~ar~vVla~G~~P~iP 162 (341)
T PF13434_consen 84 FYNRGYFFPSRREFNDYLRWVAEQLDNQVRYGSEVTSIEPDDDGDEDLFRVTTRD-SDGDGETYRARNVVLATGGQPRIP 162 (341)
T ss_dssp HHHH--SS-BHHHHHHHHHHHHCCGTTTEEESEEEEEEEEEEETTEEEEEEEEEE-TTS-EEEEEESEEEE----EE---
T ss_pred hhhcCCCCCCHHHHHHHHHHHHHhCCCceEECCEEEEEEEecCCCccEEEEEEee-cCCCeeEEEeCeEEECcCCCCCCC
Confidence 12222222222233433777999999987654 36677654 556778999999999999998775
Q ss_pred C
Q 010573 320 G 320 (507)
Q Consensus 320 ~ 320 (507)
.
T Consensus 163 ~ 163 (341)
T PF13434_consen 163 E 163 (341)
T ss_dssp G
T ss_pred c
Confidence 3
No 463
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]
Probab=96.04 E-value=0.018 Score=54.29 Aligned_cols=97 Identities=16% Similarity=0.308 Sum_probs=74.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEE-cc-cCccC------------CCCCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVV-EF-AADIV------------PSMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv-~~-~~~~~------------~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
+-.|+|||+|+.|...|-..+|.|.+.-++ +| +.+++ ....+.+...++++.++..|.++...+.+
T Consensus 211 ~yDVLvVGgGPAgaaAAiYaARKGiRTGl~aerfGGQvldT~~IENfIsv~~teGpkl~~ale~Hv~~Y~vDimn~qra~ 290 (520)
T COG3634 211 AYDVLVVGGGPAGAAAAIYAARKGIRTGLVAERFGGQVLDTMGIENFISVPETEGPKLAAALEAHVKQYDVDVMNLQRAS 290 (520)
T ss_pred CceEEEEcCCcchhHHHHHHHhhcchhhhhhhhhCCeeccccchhheeccccccchHHHHHHHHHHhhcCchhhhhhhhh
Confidence 668999999999999998888887665443 22 11111 13457899999999999999999888888
Q ss_pred EEEEc---CCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 280 GVDLS---GDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 280 ~i~~~---~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
++++. ++-+.++++ ++-.+.+..+|++||.+
T Consensus 291 ~l~~a~~~~~l~ev~l~-----nGavLkaktvIlstGAr 324 (520)
T COG3634 291 KLEPAAVEGGLIEVELA-----NGAVLKARTVILATGAR 324 (520)
T ss_pred cceecCCCCccEEEEec-----CCceeccceEEEecCcc
Confidence 88763 445678887 67899999999999965
No 464
>PRK07804 L-aspartate oxidase; Provisional
Probab=96.02 E-value=0.1 Score=54.79 Aligned_cols=33 Identities=39% Similarity=0.495 Sum_probs=27.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
-.|+|||+|..|+-.|..+++.|.+|+++++.+
T Consensus 17 ~DVlVIG~G~AGl~AAi~aae~G~~VilleK~~ 49 (541)
T PRK07804 17 ADVVVVGSGVAGLTAALAARRAGRRVLVVTKAA 49 (541)
T ss_pred cCEEEECccHHHHHHHHHHHHcCCeEEEEEccC
Confidence 458889999988888888888888888887654
No 465
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.02 E-value=0.11 Score=55.17 Aligned_cols=56 Identities=11% Similarity=0.159 Sum_probs=37.6
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcC-CeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSG-DGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.+.+++.||+++.++.++++..++ +.+. +...+..++....+.++.||+|||--.
T Consensus 155 L~~~~~~~gi~i~~~~~v~~Li~~~~g~v~Gv~~~~~~~g~~~~i~AkaVVLATGG~~ 212 (598)
T PRK09078 155 LYQQSLKHNAEFFIEYFALDLIMDDGGVCRGVVAWNLDDGTLHRFRAHMVVLATGGYG 212 (598)
T ss_pred HHHHHhhcCCEEEEeEEEEEEEEcCCCEEEEEEEEECCCCcEEEEEcCEEEECCCCCc
Confidence 3444556788999888998887654 4443 433333344556789999999998543
No 466
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.01 E-value=0.023 Score=58.20 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+++|||+|..|+++|..|++.|++|+++|++
T Consensus 5 ~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~ 37 (450)
T PRK14106 5 GKKVLVVGAGVSGLALAKFLKKLGAKVILTDEK 37 (450)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999999984
No 467
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit. The terms succinate dehydrogenase and fumarate reductase may be used interchangeably in certain systems. However, a number of species have distinct complexes, with the fumarate reductase active under anaerobic conditions. This model represents the fumarate reductase flavoprotein subunit from several such species in which a distinct succinate dehydrogenase is also found. Not all bona fide fumarate reductases will be found by this model.
Probab=96.01 E-value=0.14 Score=54.16 Aligned_cols=47 Identities=19% Similarity=0.138 Sum_probs=31.9
Q ss_pred cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 268 QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
.+|+++.++.++++..+++.+. +...+..++....+.++.||+|+|-
T Consensus 146 ~~i~i~~~~~v~~Li~~~g~v~Gv~~~~~~~g~~~~i~AkaVILATGG 193 (580)
T TIGR01176 146 PQIMRYDEWFVTDLLVDDGRVCGLVAIEMAEGRLVTILADAVVLATGG 193 (580)
T ss_pred CCCEEEeCeEEEEEEeeCCEEEEEEEEEcCCCcEEEEecCEEEEcCCC
Confidence 4688888888888776555554 3322223444567899999999984
No 468
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms]
Probab=95.98 E-value=0.039 Score=53.34 Aligned_cols=97 Identities=13% Similarity=0.219 Sum_probs=65.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC----CCcEE-EEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL----GLKTT-CIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS 116 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~----g~~V~-lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (507)
....|-|||+|+-|-..|+.|++. |.+|. |++...
T Consensus 346 ek~siTIiGnGflgSELacsl~rk~r~~g~eV~QvF~Ek~---------------------------------------- 385 (659)
T KOG1346|consen 346 EKQSITIIGNGFLGSELACSLKRKYRNEGVEVHQVFEEKY---------------------------------------- 385 (659)
T ss_pred hcceEEEEcCcchhhhHHHHHHHhhhccCcEEEEeecccC----------------------------------------
Confidence 346899999999999999999875 44543 343310
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EE--EecCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GK--FISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~--~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
+..+++ .+.+.++-.+..++.||+++.+. +. ..+...+.++++|| .++..|.||+|+|..|.
T Consensus 386 ---nm~kiL------Peyls~wt~ekir~~GV~V~pna~v~sv~~~~~nl~lkL~dG--~~l~tD~vVvavG~ePN 450 (659)
T KOG1346|consen 386 ---NMEKIL------PEYLSQWTIEKIRKGGVDVRPNAKVESVRKCCKNLVLKLSDG--SELRTDLVVVAVGEEPN 450 (659)
T ss_pred ---Chhhhh------HHHHHHHHHHHHHhcCceeccchhhhhhhhhccceEEEecCC--CeeeeeeEEEEecCCCc
Confidence 111111 12233333455667788887663 22 24566788899999 89999999999999985
No 469
>PTZ00367 squalene epoxidase; Provisional
Probab=95.86 E-value=0.06 Score=56.44 Aligned_cols=34 Identities=15% Similarity=0.337 Sum_probs=31.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 33 ~~dViIVGaGiaGlalA~aLar~G~~V~VlEr~~ 66 (567)
T PTZ00367 33 DYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDL 66 (567)
T ss_pred CccEEEECCCHHHHHHHHHHHhcCCEEEEEcccc
Confidence 3479999999999999999999999999999865
No 470
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Probab=95.85 E-value=0.15 Score=54.38 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=36.1
Q ss_pred HHHHHhcCcEEEcCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 262 QRSLEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 262 ~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+...+.||+++.++.++++..+ ++.+. +.+.+..++....+.++.||+|||--.
T Consensus 194 ~~~a~~~gv~i~~~~~~~~Li~~~~g~v~Gv~~~~~~~g~~~~i~AkaVILATGG~g 250 (635)
T PLN00128 194 YGQAMKHNTQFFVEYFALDLIMDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYG 250 (635)
T ss_pred HHHHHhCCCEEEEeeEEEEEEEcCCCEEEEEEEEEcCCCeEEEEEcCeEEECCCCCc
Confidence 33444568888888888887654 44443 433333345556789999999998543
No 471
>PRK09231 fumarate reductase flavoprotein subunit; Validated
Probab=95.85 E-value=0.16 Score=53.69 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=31.8
Q ss_pred cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 268 QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
.+|+++.++.++++..+++.+. +...+..++....+.++.||+|+|-
T Consensus 147 ~~i~i~~~~~v~~Li~~~g~v~Gv~~~~~~~g~~~~i~AkaVIlATGG 194 (582)
T PRK09231 147 PQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGG 194 (582)
T ss_pred CCcEEEeCeEEEEEEEeCCEEEEEEEEEcCCCcEEEEECCEEEECCCC
Confidence 3788888888888776555554 3222223344467899999999984
No 472
>PLN02815 L-aspartate oxidase
Probab=95.82 E-value=0.1 Score=55.19 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=34.1
Q ss_pred HHHHHHHh-cCcEEEcCceEEEEEEcC-Ce---EE-EEEeecCCCceEEEEcCEEEEeec
Q 010573 260 QFQRSLEK-QKMKFMLKTKVVGVDLSG-DG---VK-LTLEPAAGGEKTILEADVVLVSAG 313 (507)
Q Consensus 260 ~~~~~l~~-~Gv~i~~~~~v~~i~~~~-~~---v~-v~~~~~~~g~~~~i~~D~vi~a~G 313 (507)
.+.+.+++ .||+++.++.++++..++ ++ +. +.+.+..++....+.++.||+|||
T Consensus 160 ~L~~~~~~~~~i~i~~~~~~~~Li~~~~g~~~~v~Gv~~~~~~~g~~~~i~AkaVILATG 219 (594)
T PLN02815 160 ALLEAVKNDPNITFFEHHFAIDLLTSQDGGSIVCHGADVLDTRTGEVVRFISKVTLLASG 219 (594)
T ss_pred HHHHHHHhcCCCEEEeceEhheeeeecCCCccEEEEEEEEEcCCCeEEEEEeceEEEcCC
Confidence 33344443 388888888888876543 22 32 433333344445788999999998
No 473
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=95.73 E-value=0.19 Score=53.22 Aligned_cols=51 Identities=14% Similarity=0.089 Sum_probs=34.3
Q ss_pred HHhcCcEEEcCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 010573 265 LEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 265 l~~~Gv~i~~~~~v~~i~~~-~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.++.||+++.++.++++..+ ++.+. +...+..++....+.++.||+|||--
T Consensus 153 ~~~~gi~i~~~~~~~~Li~~~~g~v~Gv~~~~~~~g~~~~i~AkaVILATGG~ 205 (588)
T PRK08958 153 NLKNHTTIFSEWYALDLVKNQDGAVVGCTAICIETGEVVYFKARATVLATGGA 205 (588)
T ss_pred hhhcCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 44568888888888888764 44443 33323334455678899999999854
No 474
>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function. This post-translational modification is catalysed by Rab geranylgeranyl transferase (Rab-GGTase), a multi-subunit enzyme that contains a catalytic heterodimer and an accessory component, termed Rab escort protein (REP)-1 []. REP-1 presents newly- synthesised Rab proteins to the catalytic component, and forms a stable complex with the prenylated proteins following the transfer reaction. The mechanism of REP-1-mediated membrane association of Rab5 is similar to that mediated by Rab GDP dissociation inhibitor (GDI). REP-1 and Rab GDI also share other functional properties, including the ability to inhibit the release of GDP and to remove Rab proteins from membranes. The crystal structure of the bovine alpha-isoform of Rab GDI has been determined to a resolution of 1.81A []. The protein is composed of two main structural units: a large complex multi-sheet domain I, and a smaller alpha-helical domain II. The structural organisation of domain I is closely related to FAD-containing monooxygenases and oxidases []. Conserved regions common to GDI and the choroideraemia gene product, which delivers Rab to catalytic subunits of Rab geranylgeranyltransferase II, are clustered on one face of the domain []. The two most conserved regions form a compact structure at the apex of the molecule; site-directed mutagenesis has shown these regions to play a critical role in the binding of Rab proteins [].; PDB: 1VG9_C 1VG0_A 1LTX_R 3P1W_A 3CPH_H 3CPJ_G 3CPI_H 1UKV_G 2BCG_G 1GND_A ....
Probab=95.70 E-value=0.013 Score=58.69 Aligned_cols=45 Identities=24% Similarity=0.406 Sum_probs=34.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
|...|||||+|.|..-.-.|..|++.|++|+-+|+++..||.|..
T Consensus 1 m~~~yDviI~GTGl~esila~als~~GkkVLhiD~n~yYGg~~as 45 (438)
T PF00996_consen 1 MDEEYDVIILGTGLTESILAAALSRSGKKVLHIDRNDYYGGEWAS 45 (438)
T ss_dssp --SBESEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSSCGGG-E
T ss_pred CCccceEEEECCCcHHHHHHHHHHhcCCEEEecCCCCCcCCchhc
Confidence 456799999999999999999999999999999999999998754
No 475
>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion]
Probab=95.57 E-value=0.015 Score=56.18 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=33.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC----CCcEEEEecC--CCCCc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQL----GLKTTCIEKR--GALGG 80 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~--~~~GG 80 (507)
...|||||+||||.|.+.|..|... .++|.|+|-. +++++
T Consensus 34 ~~~~dVvIvGgGpvg~aLAa~l~snp~~~~~kv~Lld~~~s~kl~~ 79 (481)
T KOG3855|consen 34 TAKYDVVIVGGGPVGLALAAALGSNPPFQDKKVLLLDAGDSPKLGD 79 (481)
T ss_pred cccCCEEEECCchHHHHHHHHhccCCccchheeeEEecccCccccc
Confidence 3479999999999999999999865 5799999986 44543
No 476
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis]
Probab=95.52 E-value=0.072 Score=52.59 Aligned_cols=32 Identities=34% Similarity=0.509 Sum_probs=28.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
-.|+|||||..|+|.|.+.+|.|.+.+++..+
T Consensus 29 ~dVvVIGgGHAG~EAAaAaaR~Ga~TlLlT~~ 60 (679)
T KOG2311|consen 29 YDVVVIGGGHAGCEAAAAAARLGARTLLLTHN 60 (679)
T ss_pred ccEEEECCCccchHHHHHHHhcCCceEEeecc
Confidence 36999999999999999999999988877543
No 477
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=95.52 E-value=0.27 Score=52.11 Aligned_cols=32 Identities=28% Similarity=0.431 Sum_probs=28.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
..|+|||+|..|+-.|..+++.|.+|.++++.
T Consensus 4 ~DVlVVG~G~AGl~AAi~Aa~~G~~V~lieK~ 35 (589)
T PRK08641 4 GKVIVVGGGLAGLMATIKAAEAGVHVDLFSLV 35 (589)
T ss_pred ccEEEECchHHHHHHHHHHHHcCCcEEEEEcc
Confidence 46999999999999999999999999999854
No 478
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=95.51 E-value=0.018 Score=57.23 Aligned_cols=35 Identities=34% Similarity=0.370 Sum_probs=32.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
++|+|||||+.|+++|..|++.|.+|+++++.+..
T Consensus 3 ~dVvVIGGGlAGleAAlaLAr~Gl~V~LiE~rp~~ 37 (436)
T PRK05335 3 KPVNVIGAGLAGSEAAWQLAKRGVPVELYEMRPVK 37 (436)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEEccCcc
Confidence 57999999999999999999999999999976654
No 479
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.49 E-value=0.18 Score=50.33 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=28.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcC---CeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLG---SEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g---~~Vtlv~~~~~~ 249 (507)
.+|+|||+|++|+.+|..|.+.- ..|++++..+++
T Consensus 2 ~~VAIIGgG~sGi~~A~~Ll~~~~~~~~Isi~e~~~~~ 39 (474)
T COG4529 2 FKVAIIGGGFSGIYMAAHLLKSPRPSGLISIFEPRPNF 39 (474)
T ss_pred ceEEEECCchHHHHHHHHHHhCCCCCCceEEecccccc
Confidence 47999999999999999998752 238888877765
No 480
>PRK08071 L-aspartate oxidase; Provisional
Probab=95.48 E-value=0.18 Score=52.41 Aligned_cols=45 Identities=33% Similarity=0.414 Sum_probs=31.5
Q ss_pred CCeecCCCCCCCCCCeEEecCCCC-CCC----c----HhHHHHHHHHHHHHHcC
Q 010573 334 GRIPVNERFATNIPGVYAIGDVIP-GPM----L----AHKAEEDGVACVEFLAG 378 (507)
Q Consensus 334 G~i~Vd~~~~t~~~~IyA~GD~a~-~~~----~----~~~A~~~g~~aa~~i~~ 378 (507)
|+|.||.+.+|++||+||+|+|++ +.. + ...+.-.|+.|++++..
T Consensus 333 GGi~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~g~sl~~~~v~G~~Ag~~aa~ 386 (510)
T PRK08071 333 GGVKTNLDGETSIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILT 386 (510)
T ss_pred CCEEECCCCcccCCCeEEcccccccccCCCcccchHHHHHHHHHHHHHHHHHHh
Confidence 667888888888888888888863 221 2 24556667778887754
No 481
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.42 E-value=0.05 Score=55.81 Aligned_cols=81 Identities=23% Similarity=0.349 Sum_probs=57.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~ 292 (507)
.+++++|+|+|.+|+.+|..|++.|.+|+++++.+. +.+ +...+.+.+.|++++.......
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~------~~~-~~~~~~l~~~~~~~~~~~~~~~------------ 64 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEE------DQL-KEALEELGELGIELVLGEYPEE------------ 64 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCch------HHH-HHHHHHHHhcCCEEEeCCcchh------------
Confidence 368999999999999999999999999999977541 122 2223445666777654332210
Q ss_pred eecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 293 EPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 293 ~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
..-.+|.||.++|..|+.+.
T Consensus 65 --------~~~~~d~vv~~~g~~~~~~~ 84 (450)
T PRK14106 65 --------FLEGVDLVVVSPGVPLDSPP 84 (450)
T ss_pred --------HhhcCCEEEECCCCCCCCHH
Confidence 01247999999999887653
No 482
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=95.36 E-value=0.28 Score=52.03 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhcCcEEEcCceEEEEEEcC----CeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSG----DGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~----~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+...+.+.+++.||+++.++.++++..++ +.+. +...+..++....+.++.||+|||-..
T Consensus 142 i~~~L~~~~~~~gv~i~~~~~v~~Li~~~~~~~g~v~Gv~~~~~~~g~~~~i~AkaVVLATGG~~ 206 (583)
T PRK08205 142 ILQTLYQNCVKHGVEFFNEFYVLDLLLTETPSGPVAAGVVAYELATGEIHVFHAKAVVFATGGSG 206 (583)
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecCCccCCcEEEEEEEEcCCCeEEEEEeCeEEECCCCCc
Confidence 44455666677899999999999986544 3433 333222333445789999999999654
No 483
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ. CobZ is essential for cobalamin biosynthesis (by knockout of the R. capsulatus gene ) and is complemented by the characterized precorrin 3B synthase CobG. The enzyme has been shown to contain flavin, heme and Fe-S cluster cofactors and is believed to require dioxygen as a substrate. This model identifies the N-terminal portion of the R. capsulatus gene which, in other species exists as a separate protein. The C-terminal portion is homologous to the 2-component signal transduction system protein CitB (TIGR02484).
Probab=95.31 E-value=0.21 Score=50.93 Aligned_cols=53 Identities=9% Similarity=0.073 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcCcEEEcCceEEEEEEc--CCeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 258 RKQFQRSLEKQKMKFMLKTKVVGVDLS--GDGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 258 ~~~~~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
.+.+.+.+++.|++++++++++++..+ ++.+. +... ++...+.++.||+|+|-
T Consensus 126 ~~~L~~~a~~~Gv~i~~~~~v~~l~~~~~~g~v~gv~~~----~~~~~i~ak~VIlAtGG 181 (432)
T TIGR02485 126 TNALYSSAERLGVEIRYGIAVDRIPPEAFDGAHDGPLTT----VGTHRITTQALVLAAGG 181 (432)
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEecCCCCeEEEEEEc----CCcEEEEcCEEEEcCCC
Confidence 344555567789999999999998765 33333 3321 12357899999999994
No 484
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.20 E-value=0.25 Score=46.97 Aligned_cols=75 Identities=20% Similarity=0.348 Sum_probs=45.1
Q ss_pred HHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeec
Q 010573 259 KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPV 338 (507)
Q Consensus 259 ~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~V 338 (507)
..+++.|.+.+|+++.+.. ++. +++.+.|+.. ++....+.+..+++|+|-+|..+.+ ....+.+|.+|+...
T Consensus 114 gIY~~~L~k~~V~~i~G~a--~f~-~~~~v~V~~~---d~~~~~Ytak~iLIAtGg~p~~PnI--pG~E~gidSDgff~L 185 (478)
T KOG0405|consen 114 GIYKRNLAKAAVKLIEGRA--RFV-SPGEVEVEVN---DGTKIVYTAKHILIATGGRPIIPNI--PGAELGIDSDGFFDL 185 (478)
T ss_pred HHHHhhccccceeEEeeeE--EEc-CCCceEEEec---CCeeEEEecceEEEEeCCccCCCCC--Cchhhccccccccch
Confidence 3455666667777765421 111 3445566553 2233458899999999999988753 444455556666655
Q ss_pred CCC
Q 010573 339 NER 341 (507)
Q Consensus 339 d~~ 341 (507)
.+.
T Consensus 186 ee~ 188 (478)
T KOG0405|consen 186 EEQ 188 (478)
T ss_pred hhc
Confidence 443
No 485
>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only]
Probab=95.15 E-value=0.025 Score=58.24 Aligned_cols=37 Identities=27% Similarity=0.469 Sum_probs=33.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRG 76 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 76 (507)
....||.+|||||.||...|.+|.+. ..+|+|+|+..
T Consensus 54 ~~~~yDyIVVGgGtAGcvlAarLSEn~~~~VLLLEaGg 91 (623)
T KOG1238|consen 54 LDSSYDYIVVGGGTAGCVLAARLSENPNWSVLLLEAGG 91 (623)
T ss_pred cccCCCEEEECCCchhHHHHHhhccCCCceEEEEecCC
Confidence 45679999999999999999999997 68999999943
No 486
>TIGR03862 flavo_PP4765 uncharacterized flavoprotein, PP_4765 family. This model describes a sharply distinctive clade of proteins within the larger family of flavoproteins described by Pfam model pfam03486 and TIGRFAMs model TIGR00275. The function is unknown.
Probab=95.12 E-value=0.19 Score=49.62 Aligned_cols=83 Identities=18% Similarity=0.354 Sum_probs=60.6
Q ss_pred HHHHHHHHhcCCeeEEEcccCccCCC--CCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEE
Q 010573 227 LEMGSVWARLGSEVTVVEFAADIVPS--MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILE 304 (507)
Q Consensus 227 ~e~A~~l~~~g~~Vtlv~~~~~~~~~--~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~ 304 (507)
-++...|.+.|... ..+...++.|. -..++.+.+...+++.||+++++++|+++ ++++..+.+.. +...+.
T Consensus 57 ~d~~~fF~~~Gi~~-~~e~~grvfP~S~~A~sVv~~L~~~l~~~gV~i~~~~~V~~i--~~~~~~v~~~~----~~~~~~ 129 (376)
T TIGR03862 57 VALQDWARGLGIET-FVGSSGRVFPVEMKAAPLLRAWLKRLAEQGVQFHTRHRWIGW--QGGTLRFETPD----GQSTIE 129 (376)
T ss_pred HHHHHHHHHCCCce-EECCCCEECCCCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEE--eCCcEEEEECC----CceEEe
Confidence 45667777888653 34555666663 34678888999999999999999999999 33445555431 234699
Q ss_pred cCEEEEeecCCC
Q 010573 305 ADVVLVSAGRTP 316 (507)
Q Consensus 305 ~D~vi~a~G~~p 316 (507)
+|.||+|+|-.+
T Consensus 130 a~~vIlAtGG~s 141 (376)
T TIGR03862 130 ADAVVLALGGAS 141 (376)
T ss_pred cCEEEEcCCCcc
Confidence 999999999764
No 487
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. In vertebrates MAO plays an important role in regulating the intracellular levels of amines via their oxidation; these include various neurotransmitters, neurotoxins and trace amines []. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium []. PAOs in plants, bacteria and protozoa oxidise spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines []. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2Z5U_A ....
Probab=94.92 E-value=0.022 Score=57.71 Aligned_cols=51 Identities=24% Similarity=0.306 Sum_probs=38.9
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
........|.+++++++|++|+.+++++.+++. +++++.+|.||+|+....
T Consensus 215 ~~~~~~~~g~~i~l~~~V~~I~~~~~~v~v~~~-----~g~~~~ad~VI~a~p~~~ 265 (450)
T PF01593_consen 215 LALAAEELGGEIRLNTPVTRIEREDGGVTVTTE-----DGETIEADAVISAVPPSV 265 (450)
T ss_dssp HHHHHHHHGGGEESSEEEEEEEEESSEEEEEET-----TSSEEEESEEEE-S-HHH
T ss_pred HHHHHhhcCceeecCCcceeccccccccccccc-----cceEEecceeeecCchhh
Confidence 334444456799999999999999999998886 455999999999987543
No 488
>PRK09077 L-aspartate oxidase; Provisional
Probab=94.82 E-value=0.44 Score=50.01 Aligned_cols=56 Identities=9% Similarity=0.125 Sum_probs=36.3
Q ss_pred HHHHHHHHh-cCcEEEcCceEEEEEEcC------CeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 259 KQFQRSLEK-QKMKFMLKTKVVGVDLSG------DGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 259 ~~~~~~l~~-~Gv~i~~~~~v~~i~~~~------~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
..+.+.+++ .||+++.++.++++..++ +.+. +.+.+..++....+.++.||+|+|-
T Consensus 142 ~~L~~~~~~~~~I~v~~~~~v~~Li~~~~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVlATGG 205 (536)
T PRK09077 142 TTLVERARNHPNITVLERHNAIDLITSDKLGLPGRRVVGAYVLNRNKERVETIRAKFVVLATGG 205 (536)
T ss_pred HHHHHHHHhCCCcEEEeeEEeeeeeecccccCCCCEEEEEEEEECCCCcEEEEecCeEEECCCC
Confidence 334444444 389999888888775432 4443 4444333445567899999999984
No 489
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.78 E-value=0.026 Score=44.60 Aligned_cols=34 Identities=32% Similarity=0.423 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
+..+++|||||..|..-+..|.+.|.+|+|+.++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~ 39 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPE 39 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCc
Confidence 3468999999999999999999999999999884
No 490
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.64 E-value=0.038 Score=47.49 Aligned_cols=31 Identities=29% Similarity=0.311 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
+|.|||||..|.+.|..|++.|++|+|+.++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~ 31 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRD 31 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSC
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEecc
Confidence 4899999999999999999999999999884
No 491
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=94.63 E-value=0.44 Score=50.45 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=35.2
Q ss_pred HHHhcCcEEEcCceEEEEEEcC-CeEE-EEEeecCCCceEEEEcC-EEEEeec-CCCCCC
Q 010573 264 SLEKQKMKFMLKTKVVGVDLSG-DGVK-LTLEPAAGGEKTILEAD-VVLVSAG-RTPFTA 319 (507)
Q Consensus 264 ~l~~~Gv~i~~~~~v~~i~~~~-~~v~-v~~~~~~~g~~~~i~~D-~vi~a~G-~~p~~~ 319 (507)
..++.|++++++++++++..++ +.+. +.... ++....+.+. .||+|+| +.-|.+
T Consensus 222 ~~~~~gv~i~~~~~~~~Li~d~~g~V~Gv~~~~--~~~~~~i~a~~aVilAtGGf~~N~e 279 (584)
T PRK12835 222 ALKDAGVPLWLDSPMTELITDPDGAVVGAVVER--EGRTLRIGARRGVILATGGFDHDMD 279 (584)
T ss_pred HHHhCCceEEeCCEEEEEEECCCCcEEEEEEEe--CCcEEEEEeceeEEEecCcccCCHH
Confidence 3446689999999999998753 4443 44432 3344568887 5888887 444443
No 492
>PRK07395 L-aspartate oxidase; Provisional
Probab=94.56 E-value=0.28 Score=51.52 Aligned_cols=52 Identities=15% Similarity=0.268 Sum_probs=31.6
Q ss_pred HHHHHHh-cCcEEEcCceEEEEEEcC--CeEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 261 FQRSLEK-QKMKFMLKTKVVGVDLSG--DGVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 261 ~~~~l~~-~Gv~i~~~~~v~~i~~~~--~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
+.+.+++ .||+++.++.++++..++ +.+. +.... ++....+.++.||+|||-
T Consensus 140 L~~~~~~~~gi~i~~~~~v~~Li~~~~~g~v~Gv~~~~--~g~~~~i~AkaVILATGG 195 (553)
T PRK07395 140 LTEQVLQRPNIEIISQALALSLWLEPETGRCQGISLLY--QGQITWLRAGAVILATGG 195 (553)
T ss_pred HHHHHhhcCCcEEEECcChhhheecCCCCEEEEEEEEE--CCeEEEEEcCEEEEcCCC
Confidence 3344433 378888888877775542 3333 33321 333345889999999996
No 493
>PRK06475 salicylate hydroxylase; Provisional
Probab=94.52 E-value=0.061 Score=54.18 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=32.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
++|+|||||+.|+-+|..|++.|.+|+++++.+.+
T Consensus 3 ~~V~IvGgGiaGl~~A~~L~~~G~~V~i~E~~~~~ 37 (400)
T PRK06475 3 GSPLIAGAGVAGLSAALELAARGWAVTIIEKAQEL 37 (400)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEecCCcc
Confidence 68999999999999999999999999999988764
No 494
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism]
Probab=94.51 E-value=0.24 Score=49.55 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=28.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
.|+|||+|..|+-+|..|.+. .+|+++.+.+.
T Consensus 9 dV~IiGsG~AGL~~AL~L~~~-~~V~vltk~~~ 40 (518)
T COG0029 9 DVLIIGSGLAGLTAALSLAPS-FRVTVLTKGPL 40 (518)
T ss_pred cEEEECCcHHHHHHHHhCCCC-CcEEEEeCCCC
Confidence 699999999999999999887 78888887654
No 495
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.51 E-value=0.048 Score=49.90 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
++++|||+|..|.+.|..|.+.|++|++||++
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 37999999999999999999999999999994
No 496
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=94.47 E-value=0.078 Score=53.71 Aligned_cols=36 Identities=17% Similarity=0.428 Sum_probs=32.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 18 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 53 (415)
T PRK07364 18 TYDVAIVGGGIVGLTLAAALKDSGLRIALIEAQPAE 53 (415)
T ss_pred ccCEEEECcCHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 457999999999999999999999999999998754
No 497
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=94.43 E-value=0.8 Score=48.25 Aligned_cols=55 Identities=13% Similarity=0.182 Sum_probs=35.9
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcC-EEEEeecCCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEAD-VVLVSAGRTP 316 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D-~vi~a~G~~p 316 (507)
.+.+.+++.|++++++++++++..+++.+. +.... ++....+.++ .||+|+|--.
T Consensus 213 ~l~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~--~g~~~~i~A~~aVIlAtGG~~ 269 (557)
T PRK12844 213 RMLEAALAAGVPLWTNTPLTELIVEDGRVVGVVVVR--DGREVLIRARRGVLLASGGFG 269 (557)
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEeCCEEEEEEEEE--CCeEEEEEecceEEEecCCcc
Confidence 344556667889999999998876655554 44432 3344567784 6888887544
No 498
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.42 E-value=0.049 Score=55.93 Aligned_cols=38 Identities=34% Similarity=0.480 Sum_probs=35.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV 250 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 250 (507)
..++|+|||+|.+|+-+|..|.++|.+|++++.++++.
T Consensus 14 ~~~~VIVIGAGiaGLsAArqL~~~G~~V~VLEARdRvG 51 (501)
T KOG0029|consen 14 KKKKVIVIGAGLAGLSAARQLQDFGFDVLVLEARDRVG 51 (501)
T ss_pred CCCcEEEECCcHHHHHHHHHHHHcCCceEEEeccCCcC
Confidence 46799999999999999999999999999999988874
No 499
>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism]
Probab=94.40 E-value=0.16 Score=48.92 Aligned_cols=64 Identities=16% Similarity=0.276 Sum_probs=49.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccCC----------CCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIVP----------SMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~----------~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
.+|.|||+|+.|+-.|..|.+. +.+|+++++.+.+.. ..-+...+.+.+.++.....+..|..|
T Consensus 21 p~vcIVGsGPAGfYtA~~LLk~~~~~~Vdi~Ek~PvPFGLvRyGVAPDHpEvKnvintFt~~aE~~rfsf~gNv~v 96 (468)
T KOG1800|consen 21 PRVCIVGSGPAGFYTAQHLLKRHPNAHVDIFEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTAEHERFSFFGNVKV 96 (468)
T ss_pred ceEEEECCCchHHHHHHHHHhcCCCCeeEeeecCCcccceeeeccCCCCcchhhHHHHHHHHhhccceEEEeccee
Confidence 3899999999999999998874 589999998886531 122445566777788888888877666
No 500
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism]
Probab=94.39 E-value=0.25 Score=47.68 Aligned_cols=31 Identities=29% Similarity=0.519 Sum_probs=29.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
.|+|||+|..|.-+|..|.+.|.+|++++|.
T Consensus 47 DvIIVGAGV~GsaLa~~L~kdGRrVhVIERD 77 (509)
T KOG1298|consen 47 DVIIVGAGVAGSALAYALAKDGRRVHVIERD 77 (509)
T ss_pred cEEEECCcchHHHHHHHHhhCCcEEEEEecc
Confidence 4899999999999999999999999999986
Done!