Query 010573
Match_columns 507
No_of_seqs 335 out of 2743
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 09:43:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010573.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010573hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 100.0 1.5E-79 5.1E-84 630.7 43.1 458 39-502 38-526 (542)
2 3urh_A Dihydrolipoyl dehydroge 100.0 6.6E-78 2.2E-82 620.6 54.8 470 37-506 19-490 (491)
3 3lad_A Dihydrolipoamide dehydr 100.0 1.2E-75 4E-80 602.0 51.2 463 42-506 2-470 (476)
4 2qae_A Lipoamide, dihydrolipoy 100.0 3.4E-73 1.2E-77 582.2 52.6 463 43-506 2-467 (468)
5 1zmd_A Dihydrolipoyl dehydroge 100.0 2.9E-73 1E-77 583.6 51.5 464 43-506 6-473 (474)
6 1v59_A Dihydrolipoamide dehydr 100.0 3E-73 1E-77 584.5 50.9 465 42-506 4-477 (478)
7 1ojt_A Surface protein; redox- 100.0 2.5E-73 8.6E-78 584.7 49.8 463 41-506 4-476 (482)
8 1dxl_A Dihydrolipoamide dehydr 100.0 4.1E-73 1.4E-77 582.5 50.9 466 41-506 4-469 (470)
9 2eq6_A Pyruvate dehydrogenase 100.0 4.5E-72 1.5E-76 572.3 51.6 454 43-506 6-460 (464)
10 2a8x_A Dihydrolipoyl dehydroge 100.0 3.4E-72 1.2E-76 574.2 50.1 459 43-506 3-463 (464)
11 1ebd_A E3BD, dihydrolipoamide 100.0 8.8E-72 3E-76 569.7 52.3 452 43-500 3-454 (455)
12 3ic9_A Dihydrolipoamide dehydr 100.0 7E-72 2.4E-76 574.3 47.6 454 43-504 8-470 (492)
13 3l8k_A Dihydrolipoyl dehydroge 100.0 2.1E-71 7.3E-76 568.0 48.5 444 43-503 4-460 (466)
14 3dk9_A Grase, GR, glutathione 100.0 5.7E-71 1.9E-75 567.3 48.1 447 40-495 17-476 (478)
15 1xdi_A RV3303C-LPDA; reductase 100.0 1.1E-70 3.9E-75 567.4 49.6 453 43-502 2-466 (499)
16 4dna_A Probable glutathione re 100.0 5.7E-71 2E-75 564.7 45.0 440 43-497 5-450 (463)
17 3dgz_A Thioredoxin reductase 2 100.0 1.6E-70 5.6E-75 564.7 47.9 451 42-497 5-475 (488)
18 1zk7_A HGII, reductase, mercur 100.0 1.2E-69 4.1E-74 555.8 53.6 449 41-500 2-455 (467)
19 2yqu_A 2-oxoglutarate dehydrog 100.0 2.1E-70 7.2E-75 559.5 47.8 454 43-506 1-454 (455)
20 3qfa_A Thioredoxin reductase 1 100.0 2.9E-70 9.8E-75 565.6 48.5 455 38-497 27-503 (519)
21 1lvl_A Dihydrolipoamide dehydr 100.0 3.1E-70 1.1E-74 557.8 48.0 450 43-506 5-457 (458)
22 2wpf_A Trypanothione reductase 100.0 2.2E-70 7.6E-75 563.2 45.3 448 40-497 4-475 (495)
23 2hqm_A GR, grase, glutathione 100.0 4.1E-70 1.4E-74 560.1 47.0 450 37-498 5-472 (479)
24 3o0h_A Glutathione reductase; 100.0 2.2E-70 7.6E-75 563.1 43.7 442 42-497 25-470 (484)
25 1fec_A Trypanothione reductase 100.0 6.3E-70 2.2E-74 559.5 46.6 445 43-497 3-471 (490)
26 1ges_A Glutathione reductase; 100.0 2.6E-70 9E-75 557.1 42.7 439 42-495 3-448 (450)
27 3dgh_A TRXR-1, thioredoxin red 100.0 2.8E-69 9.5E-74 555.1 47.6 450 41-497 7-475 (483)
28 2r9z_A Glutathione amide reduc 100.0 2.3E-69 7.7E-74 551.9 45.3 441 41-497 2-448 (463)
29 1onf_A GR, grase, glutathione 100.0 1.2E-67 4.2E-72 544.3 47.2 441 43-497 2-496 (500)
30 1mo9_A ORF3; nucleotide bindin 100.0 3.8E-68 1.3E-72 550.7 43.3 440 40-502 40-519 (523)
31 2x8g_A Thioredoxin glutathione 100.0 2.4E-63 8.3E-68 524.0 46.2 452 41-498 105-583 (598)
32 4eqs_A Coenzyme A disulfide re 100.0 2.3E-60 7.8E-65 481.1 33.2 401 45-495 2-428 (437)
33 3oc4_A Oxidoreductase, pyridin 100.0 4.1E-59 1.4E-63 475.4 38.3 409 44-502 3-440 (452)
34 3kd9_A Coenzyme A disulfide re 100.0 1.9E-58 6.4E-63 470.5 37.8 405 43-498 3-435 (449)
35 3iwa_A FAD-dependent pyridine 100.0 1.3E-58 4.4E-63 474.7 35.9 421 43-502 3-459 (472)
36 3cgb_A Pyridine nucleotide-dis 100.0 1.8E-56 6.2E-61 458.9 40.6 428 18-499 16-475 (480)
37 2cdu_A NADPH oxidase; flavoenz 100.0 1.6E-56 5.4E-61 456.6 39.0 413 44-502 1-445 (452)
38 2bc0_A NADH oxidase; flavoprot 100.0 1.4E-56 4.7E-61 461.0 38.9 409 43-500 35-485 (490)
39 3ics_A Coenzyme A-disulfide re 100.0 5.2E-57 1.8E-61 475.0 34.0 422 18-492 16-469 (588)
40 1nhp_A NADH peroxidase; oxidor 100.0 6.8E-56 2.3E-60 451.3 37.8 404 44-498 1-437 (447)
41 3ntd_A FAD-dependent pyridine 100.0 1.3E-55 4.4E-60 463.2 38.4 402 44-492 2-453 (565)
42 2v3a_A Rubredoxin reductase; a 100.0 8.3E-48 2.8E-52 384.0 26.6 359 42-467 3-377 (384)
43 3klj_A NAD(FAD)-dependent dehy 100.0 4.6E-48 1.6E-52 384.0 23.4 361 41-495 7-384 (385)
44 1xhc_A NADH oxidase /nitrite r 100.0 2E-46 6.7E-51 370.7 21.9 333 44-460 9-354 (367)
45 2gqw_A Ferredoxin reductase; f 100.0 4.1E-44 1.4E-48 359.5 33.3 364 42-481 6-394 (408)
46 1q1r_A Putidaredoxin reductase 100.0 2E-44 6.8E-49 364.3 28.3 379 43-488 4-410 (431)
47 3lxd_A FAD-dependent pyridine 100.0 7.4E-43 2.5E-47 351.9 33.4 370 42-480 8-404 (415)
48 3ef6_A Toluene 1,2-dioxygenase 100.0 1.8E-43 6.3E-48 355.3 26.0 368 44-481 3-393 (410)
49 3fg2_P Putative rubredoxin red 100.0 5.7E-42 1.9E-46 344.0 34.9 362 44-476 2-387 (404)
50 4gcm_A TRXR, thioredoxin reduc 100.0 7.9E-41 2.7E-45 324.4 31.1 291 43-377 6-302 (312)
51 4a5l_A Thioredoxin reductase; 100.0 1.5E-40 5.2E-45 322.8 25.8 299 40-377 1-308 (314)
52 1m6i_A Programmed cell death p 100.0 3.2E-40 1.1E-44 338.8 24.0 408 39-482 7-484 (493)
53 2q7v_A Thioredoxin reductase; 100.0 2.3E-38 8E-43 308.9 29.8 295 41-378 6-309 (325)
54 3f8d_A Thioredoxin reductase ( 100.0 2.8E-38 9.4E-43 307.9 28.9 291 43-377 15-313 (323)
55 2q0l_A TRXR, thioredoxin reduc 100.0 8.4E-38 2.9E-42 303.0 30.0 293 43-378 1-306 (311)
56 1fl2_A Alkyl hydroperoxide red 100.0 1.2E-37 4E-42 301.9 30.5 290 43-378 1-302 (310)
57 3cty_A Thioredoxin reductase; 100.0 1.8E-37 6E-42 301.8 30.3 294 40-378 13-313 (319)
58 3r9u_A Thioredoxin reductase; 100.0 8.9E-38 3E-42 303.3 27.5 295 42-377 3-308 (315)
59 4g6h_A Rotenone-insensitive NA 100.0 9E-39 3.1E-43 327.5 19.1 298 41-378 40-398 (502)
60 4fk1_A Putative thioredoxin re 100.0 6.2E-38 2.1E-42 302.7 23.5 284 40-377 3-296 (304)
61 2zbw_A Thioredoxin reductase; 100.0 1.8E-37 6.2E-42 303.9 25.6 299 42-379 4-315 (335)
62 3itj_A Thioredoxin reductase 1 100.0 2.1E-37 7.1E-42 303.8 24.6 297 39-378 18-332 (338)
63 1trb_A Thioredoxin reductase; 100.0 2.3E-37 7.9E-42 301.2 24.3 293 43-377 5-310 (320)
64 3lzw_A Ferredoxin--NADP reduct 100.0 8.8E-38 3E-42 305.6 20.4 292 43-378 7-312 (332)
65 3fbs_A Oxidoreductase; structu 100.0 6.7E-37 2.3E-41 294.5 23.0 278 43-377 2-288 (297)
66 3ab1_A Ferredoxin--NADP reduct 100.0 1.2E-36 4E-41 301.2 24.6 300 40-379 11-326 (360)
67 2a87_A TRXR, TR, thioredoxin r 100.0 1.5E-36 5E-41 297.4 24.7 295 40-377 11-312 (335)
68 1hyu_A AHPF, alkyl hydroperoxi 100.0 9E-36 3.1E-40 307.7 31.1 291 41-377 210-512 (521)
69 1vdc_A NTR, NADPH dependent th 100.0 6.1E-36 2.1E-40 292.8 26.8 293 43-378 8-320 (333)
70 1gte_A Dihydropyrimidine dehyd 100.0 2.5E-36 8.4E-41 334.0 14.8 310 42-404 186-534 (1025)
71 2vdc_G Glutamate synthase [NAD 100.0 9.4E-36 3.2E-40 301.2 15.7 282 41-378 120-441 (456)
72 3d1c_A Flavin-containing putat 100.0 2.2E-34 7.5E-39 285.9 22.7 311 43-379 4-337 (369)
73 4a9w_A Monooxygenase; baeyer-v 100.0 6.1E-34 2.1E-38 281.1 23.3 303 43-379 3-350 (357)
74 3hyw_A Sulfide-quinone reducta 100.0 3.3E-34 1.1E-38 289.6 17.4 287 44-378 3-330 (430)
75 3sx6_A Sulfide-quinone reducta 100.0 5.2E-34 1.8E-38 289.0 18.3 289 43-378 4-341 (437)
76 3k30_A Histamine dehydrogenase 100.0 1.8E-33 6.1E-38 300.1 16.3 296 14-379 363-673 (690)
77 3h8l_A NADH oxidase; membrane 100.0 7.7E-33 2.6E-37 278.4 18.8 284 44-379 2-334 (409)
78 1lqt_A FPRA; NADP+ derivative, 100.0 1.2E-32 4E-37 279.0 17.6 281 43-378 3-384 (456)
79 1o94_A Tmadh, trimethylamine d 100.0 4.2E-33 1.4E-37 298.3 14.5 312 15-390 362-706 (729)
80 1cjc_A Protein (adrenodoxin re 100.0 1.6E-32 5.5E-37 278.3 17.7 281 43-378 6-392 (460)
81 2xve_A Flavin-containing monoo 100.0 3.5E-31 1.2E-35 269.6 27.6 308 44-380 3-340 (464)
82 3h28_A Sulfide-quinone reducta 100.0 2.3E-32 7.7E-37 276.5 18.1 284 44-378 3-330 (430)
83 3s5w_A L-ornithine 5-monooxyge 100.0 1.6E-30 5.3E-35 266.0 30.0 316 42-377 29-445 (463)
84 3vrd_B FCCB subunit, flavocyto 100.0 6.3E-33 2.2E-37 278.4 10.3 284 44-377 3-320 (401)
85 2gag_A Heterotetrameric sarcos 100.0 2.3E-31 8E-36 292.2 21.3 281 42-379 127-442 (965)
86 2gv8_A Monooxygenase; FMO, FAD 100.0 9.5E-31 3.2E-35 266.0 22.4 301 41-379 4-360 (447)
87 1ps9_A 2,4-dienoyl-COA reducta 100.0 2E-30 6.9E-35 276.0 22.1 277 16-376 352-671 (671)
88 1y56_A Hypothetical protein PH 100.0 1.8E-29 6.1E-34 259.0 13.0 255 42-379 107-375 (493)
89 3gwf_A Cyclohexanone monooxyge 100.0 5.5E-28 1.9E-32 249.6 21.9 302 43-377 8-453 (540)
90 3uox_A Otemo; baeyer-villiger 100.0 2E-27 6.9E-32 245.6 22.6 308 42-377 8-462 (545)
91 4ap3_A Steroid monooxygenase; 99.9 7.4E-26 2.5E-30 234.1 24.6 302 42-377 20-467 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 1.4E-25 4.7E-30 233.0 18.2 306 42-377 15-462 (542)
93 2ywl_A Thioredoxin reductase r 99.9 2.5E-23 8.5E-28 184.2 13.9 152 216-379 3-169 (180)
94 4b63_A L-ornithine N5 monooxyg 99.9 4.7E-20 1.6E-24 189.1 28.1 216 162-378 185-484 (501)
95 2e5v_A L-aspartate oxidase; ar 99.8 1.1E-21 3.9E-26 199.6 3.6 305 45-376 1-364 (472)
96 2gqf_A Hypothetical protein HI 99.7 2.4E-19 8E-24 178.5 3.6 201 42-255 3-267 (401)
97 3fpz_A Thiazole biosynthetic e 99.7 7E-21 2.4E-25 185.0 -10.0 245 42-377 64-321 (326)
98 3k7m_X 6-hydroxy-L-nicotine ox 99.6 1.9E-17 6.5E-22 167.3 0.2 98 254-358 203-308 (431)
99 3ces_A MNMG, tRNA uridine 5-ca 99.6 3.2E-15 1.1E-19 154.2 14.6 167 42-244 27-220 (651)
100 2cul_A Glucose-inhibited divis 99.6 5E-15 1.7E-19 136.1 10.2 157 215-378 4-229 (232)
101 2zxi_A TRNA uridine 5-carboxym 99.5 1.4E-13 4.7E-18 141.5 11.9 174 42-244 26-219 (637)
102 1chu_A Protein (L-aspartate ox 99.4 2.5E-12 8.6E-17 132.7 12.6 39 42-81 7-45 (540)
103 1rp0_A ARA6, thiazole biosynth 99.3 9.1E-12 3.1E-16 117.9 10.9 164 215-379 40-273 (284)
104 1kf6_A Fumarate reductase flav 99.3 2.7E-12 9.2E-17 134.0 7.8 36 43-78 5-42 (602)
105 3v76_A Flavoprotein; structura 99.2 1.7E-10 5.9E-15 114.9 14.0 57 255-317 132-188 (417)
106 3cp8_A TRNA uridine 5-carboxym 99.2 1.1E-11 3.6E-16 128.0 5.4 172 39-243 17-213 (641)
107 3gyx_A Adenylylsulfate reducta 99.2 1.5E-10 5.1E-15 121.5 12.7 38 43-80 22-65 (662)
108 3dme_A Conserved exported prot 99.1 1.3E-09 4.5E-14 107.0 15.8 59 255-316 150-209 (369)
109 3nlc_A Uncharacterized protein 99.1 7E-10 2.4E-14 113.7 12.4 143 41-188 105-277 (549)
110 2ywl_A Thioredoxin reductase r 99.0 1.1E-09 3.6E-14 96.1 11.2 109 43-189 1-111 (180)
111 2cul_A Glucose-inhibited divis 99.0 7.6E-10 2.6E-14 101.3 10.6 119 43-189 3-126 (232)
112 1rp0_A ARA6, thiazole biosynth 99.0 3.1E-09 1E-13 100.5 12.6 132 42-189 38-192 (284)
113 1y0p_A Fumarate reductase flav 99.0 1.3E-09 4.3E-14 113.7 10.7 42 43-84 126-167 (571)
114 3oz2_A Digeranylgeranylglycero 99.0 5.7E-09 1.9E-13 103.5 14.2 61 256-317 103-163 (397)
115 3dje_A Fructosyl amine: oxygen 98.9 8.3E-09 2.8E-13 104.0 14.2 57 255-316 161-221 (438)
116 3cgv_A Geranylgeranyl reductas 98.9 1.3E-08 4.5E-13 101.0 15.2 59 256-316 103-162 (397)
117 1qo8_A Flavocytochrome C3 fuma 98.9 1.6E-09 5.6E-14 112.7 8.9 42 42-83 120-161 (566)
118 3ps9_A TRNA 5-methylaminomethy 98.9 1.6E-08 5.3E-13 107.7 16.5 57 255-316 417-473 (676)
119 2i0z_A NAD(FAD)-utilizing dehy 98.9 5.7E-09 2E-13 105.3 11.9 141 43-188 26-191 (447)
120 3nix_A Flavoprotein/dehydrogen 98.9 1.8E-08 6.2E-13 100.9 15.5 60 256-316 107-166 (421)
121 4dgk_A Phytoene dehydrogenase; 98.9 1.9E-08 6.7E-13 103.1 16.1 58 255-317 221-279 (501)
122 1y56_B Sarcosine oxidase; dehy 98.9 3.7E-08 1.3E-12 97.3 17.0 56 255-316 149-205 (382)
123 2bry_A NEDD9 interacting prote 98.9 3.3E-09 1.1E-13 108.4 9.3 125 41-189 90-231 (497)
124 3i3l_A Alkylhalidase CMLS; fla 98.9 8.9E-09 3.1E-13 107.0 12.6 137 40-188 20-188 (591)
125 2gf3_A MSOX, monomeric sarcosi 98.9 6E-08 2.1E-12 95.9 18.2 72 238-317 135-206 (389)
126 3pvc_A TRNA 5-methylaminomethy 98.9 5.3E-08 1.8E-12 103.7 18.7 57 255-316 412-469 (689)
127 2oln_A NIKD protein; flavoprot 98.9 5.4E-08 1.8E-12 96.7 17.5 54 256-315 154-207 (397)
128 3jsk_A Cypbp37 protein; octame 98.9 5.4E-09 1.8E-13 99.9 8.9 50 43-92 79-130 (344)
129 3alj_A 2-methyl-3-hydroxypyrid 98.8 1.1E-08 3.7E-13 101.0 11.0 137 42-189 10-161 (379)
130 1ryi_A Glycine oxidase; flavop 98.8 5E-08 1.7E-12 96.3 15.9 58 254-317 163-220 (382)
131 4at0_A 3-ketosteroid-delta4-5a 98.8 2.5E-08 8.5E-13 102.4 13.8 44 41-84 39-82 (510)
132 2gag_B Heterotetrameric sarcos 98.8 3.7E-08 1.3E-12 98.1 13.4 56 255-316 174-230 (405)
133 3nyc_A D-arginine dehydrogenas 98.8 3.6E-08 1.2E-12 97.2 13.0 56 255-316 154-209 (381)
134 2uzz_A N-methyl-L-tryptophan o 98.8 1.3E-07 4.5E-12 92.8 16.4 56 255-316 149-204 (372)
135 2bry_A NEDD9 interacting prote 98.8 1.3E-09 4.5E-14 111.3 1.8 107 213-319 91-233 (497)
136 1d4d_A Flavocytochrome C fumar 98.8 1.6E-08 5.6E-13 105.1 9.9 42 42-83 125-166 (572)
137 3e1t_A Halogenase; flavoprotei 98.7 3.3E-08 1.1E-12 101.6 10.9 35 42-76 6-40 (512)
138 3pl8_A Pyranose 2-oxidase; sub 98.7 1E-10 3.5E-15 122.5 -8.0 65 265-329 270-337 (623)
139 3rp8_A Flavoprotein monooxygen 98.7 3.6E-08 1.2E-12 98.2 10.5 39 40-78 20-58 (407)
140 1pj5_A N,N-dimethylglycine oxi 98.7 2.3E-07 8E-12 100.9 16.8 56 255-316 151-207 (830)
141 3kkj_A Amine oxidase, flavin-c 98.7 1.2E-08 4E-13 95.9 5.7 40 44-83 3-42 (336)
142 2wdq_A Succinate dehydrogenase 98.7 8.6E-08 2.9E-12 99.8 11.6 37 43-79 7-43 (588)
143 3da1_A Glycerol-3-phosphate de 98.7 5.4E-07 1.9E-11 93.3 17.5 63 254-316 169-232 (561)
144 1yvv_A Amine oxidase, flavin-c 98.7 1.6E-07 5.5E-12 90.8 12.4 41 43-83 2-42 (336)
145 2gmh_A Electron transfer flavo 98.6 1.1E-07 3.7E-12 99.1 11.2 47 43-89 35-87 (584)
146 3nrn_A Uncharacterized protein 98.6 3E-07 1E-11 92.0 14.0 41 44-84 1-41 (421)
147 3fmw_A Oxygenase; mithramycin, 98.6 5.1E-08 1.7E-12 101.1 7.7 38 42-79 48-85 (570)
148 4gut_A Lysine-specific histone 98.6 2.1E-08 7.1E-13 107.1 4.8 41 41-81 334-374 (776)
149 2x3n_A Probable FAD-dependent 98.6 1.7E-07 5.7E-12 93.2 10.9 36 43-78 6-41 (399)
150 4a9w_A Monooxygenase; baeyer-v 98.6 4.2E-07 1.4E-11 88.5 13.7 95 215-315 4-131 (357)
151 2e4g_A Tryptophan halogenase; 98.6 1.9E-07 6.4E-12 96.8 11.6 58 255-318 194-254 (550)
152 2qa1_A PGAE, polyketide oxygen 98.6 4.8E-08 1.6E-12 99.9 7.0 144 40-188 8-165 (500)
153 2gjc_A Thiazole biosynthetic e 98.6 1.3E-07 4.5E-12 89.8 9.4 43 42-84 64-108 (326)
154 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.4E-07 4.6E-12 91.7 9.3 40 44-83 2-44 (342)
155 2vou_A 2,6-dihydroxypyridine h 98.6 3.9E-08 1.3E-12 97.6 5.5 37 42-78 4-40 (397)
156 3c96_A Flavin-containing monoo 98.6 5.1E-07 1.8E-11 90.0 13.4 38 42-79 3-41 (410)
157 2xdo_A TETX2 protein; tetracyc 98.6 3.9E-07 1.3E-11 90.4 12.4 38 41-78 24-61 (398)
158 3ihg_A RDME; flavoenzyme, anth 98.5 8.2E-07 2.8E-11 91.7 14.7 38 42-79 4-41 (535)
159 1k0i_A P-hydroxybenzoate hydro 98.5 1.1E-07 3.6E-12 94.4 7.7 35 43-77 2-36 (394)
160 2h88_A Succinate dehydrogenase 98.5 2.8E-07 9.6E-12 96.1 10.9 37 43-79 18-54 (621)
161 3lzw_A Ferredoxin--NADP reduct 98.5 2.8E-07 9.5E-12 88.9 10.2 99 215-319 8-129 (332)
162 3f8d_A Thioredoxin reductase ( 98.5 3.5E-07 1.2E-11 87.7 10.6 100 215-320 16-129 (323)
163 3atr_A Conserved archaeal prot 98.5 3.9E-07 1.3E-11 92.1 10.8 35 43-77 6-40 (453)
164 2rgh_A Alpha-glycerophosphate 98.5 3.5E-06 1.2E-10 87.4 18.0 63 254-316 187-250 (571)
165 2xve_A Flavin-containing monoo 98.5 1.1E-06 3.6E-11 89.0 13.8 106 215-320 3-172 (464)
166 2qa2_A CABE, polyketide oxygen 98.5 7.5E-08 2.6E-12 98.4 5.2 142 42-188 11-166 (499)
167 3c4n_A Uncharacterized protein 98.5 4.1E-07 1.4E-11 90.5 10.3 37 43-79 36-74 (405)
168 2zbw_A Thioredoxin reductase; 98.5 1.2E-06 4.1E-11 84.6 13.2 96 215-315 6-120 (335)
169 4gde_A UDP-galactopyranose mut 98.5 6.1E-08 2.1E-12 99.7 4.2 45 39-83 6-51 (513)
170 3itj_A Thioredoxin reductase 1 98.5 6.4E-07 2.2E-11 86.5 11.1 104 214-320 22-146 (338)
171 2gv8_A Monooxygenase; FMO, FAD 98.5 1.7E-06 5.9E-11 87.2 14.3 106 214-319 6-182 (447)
172 2bs2_A Quinol-fumarate reducta 98.5 6.2E-07 2.1E-11 94.2 11.3 36 43-78 5-40 (660)
173 1v0j_A UDP-galactopyranose mut 98.5 1.1E-07 3.9E-12 94.3 5.3 48 38-85 2-50 (399)
174 3axb_A Putative oxidoreductase 98.5 1E-06 3.4E-11 88.9 12.4 37 42-78 22-59 (448)
175 3g5s_A Methylenetetrahydrofola 98.5 3.9E-07 1.3E-11 87.5 8.7 49 43-91 1-55 (443)
176 2dkh_A 3-hydroxybenzoate hydro 98.4 8E-07 2.7E-11 93.7 11.9 43 37-79 26-69 (639)
177 2q0l_A TRXR, thioredoxin reduc 98.4 1.5E-06 5E-11 83.0 12.8 98 216-319 3-117 (311)
178 3fbs_A Oxidoreductase; structu 98.4 1E-06 3.6E-11 83.3 11.5 99 215-319 3-115 (297)
179 3nlc_A Uncharacterized protein 98.4 9.5E-07 3.2E-11 90.5 11.5 99 214-317 107-278 (549)
180 2qcu_A Aerobic glycerol-3-phos 98.4 2.4E-06 8.1E-11 87.4 14.3 39 43-81 3-41 (501)
181 2bcg_G Secretory pathway GDP d 98.4 2.1E-07 7.2E-12 94.0 6.0 47 38-84 6-52 (453)
182 3ab1_A Ferredoxin--NADP reduct 98.4 2.3E-06 7.8E-11 83.6 13.3 98 214-316 14-131 (360)
183 3klj_A NAD(FAD)-dependent dehy 98.4 8.9E-07 3E-11 87.2 10.2 99 215-320 10-120 (385)
184 2aqj_A Tryptophan halogenase, 98.4 1.4E-06 4.8E-11 90.0 12.1 35 42-76 4-41 (538)
185 2r0c_A REBC; flavin adenine di 98.4 1.1E-06 3.6E-11 91.1 11.2 38 42-79 25-62 (549)
186 2pyx_A Tryptophan halogenase; 98.4 8.3E-07 2.8E-11 91.4 10.1 35 42-76 6-52 (526)
187 2gqf_A Hypothetical protein HI 98.4 2.4E-06 8.1E-11 84.6 12.3 97 215-317 5-169 (401)
188 3sx6_A Sulfide-quinone reducta 98.3 4.4E-07 1.5E-11 91.2 6.6 98 215-320 5-116 (437)
189 3alj_A 2-methyl-3-hydroxypyrid 98.3 2.6E-06 9E-11 83.8 11.8 97 214-318 11-162 (379)
190 2e1m_A L-glutamate oxidase; L- 98.3 4.6E-07 1.6E-11 88.3 5.9 48 37-84 38-86 (376)
191 3d1c_A Flavin-containing putat 98.3 4.5E-06 1.5E-10 81.7 12.9 97 215-317 5-144 (369)
192 3r9u_A Thioredoxin reductase; 98.3 2.5E-06 8.7E-11 81.4 10.8 99 214-319 4-121 (315)
193 2q7v_A Thioredoxin reductase; 98.3 3.5E-06 1.2E-10 80.9 11.8 99 215-319 9-126 (325)
194 2b9w_A Putative aminooxidase; 98.3 5.6E-07 1.9E-11 90.1 6.3 44 41-84 4-48 (424)
195 1jnr_A Adenylylsulfate reducta 98.3 2.3E-06 7.9E-11 90.1 11.1 35 43-77 22-60 (643)
196 1fl2_A Alkyl hydroperoxide red 98.3 2.4E-06 8.3E-11 81.4 10.3 99 216-319 3-118 (310)
197 3h8l_A NADH oxidase; membrane 98.3 6.3E-07 2.2E-11 89.3 5.8 101 215-319 2-116 (409)
198 2x3n_A Probable FAD-dependent 98.3 2.6E-06 8.8E-11 84.5 10.2 99 215-318 7-168 (399)
199 2yqu_A 2-oxoglutarate dehydrog 98.3 7.9E-06 2.7E-10 82.5 13.9 97 43-190 167-266 (455)
200 3oc4_A Oxidoreductase, pyridin 98.3 2.1E-06 7.2E-11 86.6 9.4 102 215-320 3-119 (452)
201 2vou_A 2,6-dihydroxypyridine h 98.3 3.7E-06 1.3E-10 83.3 11.0 99 214-317 5-154 (397)
202 3hdq_A UDP-galactopyranose mut 98.3 7.8E-07 2.7E-11 87.4 5.8 44 41-84 27-70 (397)
203 3cty_A Thioredoxin reductase; 98.3 5.5E-06 1.9E-10 79.3 11.7 98 215-319 17-129 (319)
204 1s3e_A Amine oxidase [flavin-c 98.2 5.7E-07 2E-11 92.6 5.0 43 42-84 3-45 (520)
205 4ap3_A Steroid monooxygenase; 98.2 3.2E-06 1.1E-10 87.2 10.4 100 215-319 22-164 (549)
206 1vdc_A NTR, NADPH dependent th 98.2 3.3E-06 1.1E-10 81.4 10.0 98 215-319 9-127 (333)
207 1xhc_A NADH oxidase /nitrite r 98.2 1.7E-06 5.9E-11 84.7 7.7 99 213-320 7-117 (367)
208 1trb_A Thioredoxin reductase; 98.2 5.6E-06 1.9E-10 79.2 11.1 98 215-319 6-119 (320)
209 3gwf_A Cyclohexanone monooxyge 98.2 6.9E-06 2.4E-10 84.5 12.2 100 215-319 9-152 (540)
210 1yvv_A Amine oxidase, flavin-c 98.2 8.2E-06 2.8E-10 78.6 12.2 97 215-317 3-163 (336)
211 3ef6_A Toluene 1,2-dioxygenase 98.2 2.1E-06 7.2E-11 85.5 8.1 99 215-320 3-115 (410)
212 4hb9_A Similarities with proba 98.2 2.7E-06 9.1E-11 84.6 8.7 35 44-78 2-36 (412)
213 3ka7_A Oxidoreductase; structu 98.2 7.9E-07 2.7E-11 89.0 4.8 57 255-317 196-253 (425)
214 1lvl_A Dihydrolipoamide dehydr 98.2 3.2E-06 1.1E-10 85.4 9.1 98 43-189 171-269 (458)
215 3h28_A Sulfide-quinone reducta 98.2 8.4E-07 2.9E-11 89.0 4.7 98 214-319 2-112 (430)
216 3hyw_A Sulfide-quinone reducta 98.2 7E-07 2.4E-11 89.5 3.7 96 214-317 2-110 (430)
217 1q1r_A Putidaredoxin reductase 98.2 3.1E-06 1.1E-10 84.7 8.3 100 214-320 4-118 (431)
218 3atr_A Conserved archaeal prot 98.2 1.9E-05 6.7E-10 79.5 14.1 104 215-318 7-164 (453)
219 3p1w_A Rabgdi protein; GDI RAB 98.2 1.3E-06 4.4E-11 87.6 5.2 47 39-85 16-62 (475)
220 2eq6_A Pyruvate dehydrogenase 98.2 1E-05 3.6E-10 81.8 12.0 98 43-189 169-272 (464)
221 1rsg_A FMS1 protein; FAD bindi 98.2 8.7E-07 3E-11 91.1 4.0 42 43-84 8-50 (516)
222 3ntd_A FAD-dependent pyridine 98.2 4.7E-06 1.6E-10 86.7 9.7 104 215-320 2-121 (565)
223 2a87_A TRXR, TR, thioredoxin r 98.2 9.1E-06 3.1E-10 78.4 11.1 100 214-320 14-130 (335)
224 3iwa_A FAD-dependent pyridine 98.2 7.2E-06 2.5E-10 83.2 10.7 105 214-320 3-129 (472)
225 2weu_A Tryptophan 5-halogenase 98.2 4.4E-06 1.5E-10 85.7 9.2 34 43-76 2-38 (511)
226 2i0z_A NAD(FAD)-utilizing dehy 98.1 1.5E-05 5E-10 80.3 12.7 97 215-316 27-191 (447)
227 2ivd_A PPO, PPOX, protoporphyr 98.1 1.2E-06 4.3E-11 89.0 4.8 46 39-84 12-57 (478)
228 3ics_A Coenzyme A-disulfide re 98.1 6.5E-06 2.2E-10 86.0 10.2 104 214-319 36-155 (588)
229 1i8t_A UDP-galactopyranose mut 98.1 1.4E-06 4.7E-11 85.3 4.7 42 43-84 1-42 (367)
230 2jae_A L-amino acid oxidase; o 98.1 1.9E-06 6.6E-11 87.9 6.0 43 41-83 9-51 (489)
231 3kd9_A Coenzyme A disulfide re 98.1 7.8E-06 2.7E-10 82.4 10.3 100 214-320 3-118 (449)
232 3uox_A Otemo; baeyer-villiger 98.1 6.8E-06 2.3E-10 84.6 9.9 100 215-319 10-152 (545)
233 2v3a_A Rubredoxin reductase; a 98.1 1.7E-05 5.9E-10 78.0 12.5 97 43-189 145-244 (384)
234 1hyu_A AHPF, alkyl hydroperoxi 98.1 1.1E-05 3.6E-10 82.9 11.2 101 214-319 212-329 (521)
235 2yg5_A Putrescine oxidase; oxi 98.1 1.3E-06 4.3E-11 88.3 4.1 42 43-84 5-46 (453)
236 3fg2_P Putative rubredoxin red 98.1 3.7E-06 1.3E-10 83.5 7.4 99 214-320 1-114 (404)
237 4eqs_A Coenzyme A disulfide re 98.1 5.6E-06 1.9E-10 83.0 8.8 103 216-320 2-120 (437)
238 4fk1_A Putative thioredoxin re 98.1 1.5E-05 5E-10 75.8 11.2 99 216-320 8-121 (304)
239 3e1t_A Halogenase; flavoprotei 98.1 4.2E-05 1.4E-09 78.4 15.4 103 215-318 8-174 (512)
240 3vrd_B FCCB subunit, flavocyto 98.1 2.5E-06 8.5E-11 84.7 6.0 99 214-320 2-112 (401)
241 3rp8_A Flavoprotein monooxygen 98.1 1.7E-05 5.8E-10 78.8 11.9 98 214-318 23-183 (407)
242 4dsg_A UDP-galactopyranose mut 98.1 2.7E-06 9.1E-11 86.5 6.1 44 41-84 7-51 (484)
243 3nks_A Protoporphyrinogen oxid 98.1 1.7E-06 5.9E-11 87.9 4.6 54 256-315 235-289 (477)
244 1ebd_A E3BD, dihydrolipoamide 98.1 1.4E-05 4.7E-10 80.7 11.2 98 43-189 170-271 (455)
245 2cdu_A NADPH oxidase; flavoenz 98.1 6.5E-06 2.2E-10 83.1 8.7 103 216-320 2-121 (452)
246 4a5l_A Thioredoxin reductase; 98.1 2E-05 6.8E-10 75.1 11.8 99 216-320 6-125 (314)
247 1sez_A Protoporphyrinogen oxid 98.1 2.4E-06 8.1E-11 87.6 5.3 43 41-83 11-53 (504)
248 1v59_A Dihydrolipoamide dehydr 98.1 1.7E-05 5.8E-10 80.6 11.5 98 43-189 183-288 (478)
249 2vvm_A Monoamine oxidase N; FA 98.1 2.3E-06 7.9E-11 87.5 5.1 56 255-315 255-311 (495)
250 1k0i_A P-hydroxybenzoate hydro 98.1 1.8E-05 6.3E-10 78.1 11.4 101 216-318 4-165 (394)
251 2bi7_A UDP-galactopyranose mut 98.1 3.1E-06 1.1E-10 83.3 5.5 42 43-84 3-44 (384)
252 3i6d_A Protoporphyrinogen oxid 98.1 1.4E-06 4.9E-11 88.3 3.2 42 43-84 5-52 (470)
253 3ihm_A Styrene monooxygenase A 98.1 3.3E-06 1.1E-10 84.6 5.8 47 44-90 23-72 (430)
254 3lxd_A FAD-dependent pyridine 98.1 4.7E-06 1.6E-10 83.1 6.9 100 214-320 9-123 (415)
255 1d5t_A Guanine nucleotide diss 98.1 3.4E-06 1.2E-10 84.5 5.8 58 255-317 234-291 (433)
256 1ges_A Glutathione reductase; 98.0 1.1E-05 3.8E-10 81.3 9.5 97 43-190 167-267 (450)
257 3s5w_A L-ornithine 5-monooxyge 98.0 1.5E-05 5.1E-10 80.7 10.4 103 216-319 32-195 (463)
258 2iid_A L-amino-acid oxidase; f 98.0 3E-06 1E-10 86.7 5.0 47 37-83 27-73 (498)
259 4gcm_A TRXR, thioredoxin reduc 98.0 2.1E-05 7.3E-10 74.9 10.7 98 216-320 8-120 (312)
260 3i3l_A Alkylhalidase CMLS; fla 98.0 6E-05 2E-09 78.3 14.4 102 214-317 23-189 (591)
261 1nhp_A NADH peroxidase; oxidor 98.0 1.5E-05 5.1E-10 80.3 9.6 104 215-320 1-119 (447)
262 2a8x_A Dihydrolipoyl dehydroge 98.0 1.9E-05 6.6E-10 79.8 10.5 98 43-189 171-272 (464)
263 3ihg_A RDME; flavoenzyme, anth 98.0 4E-05 1.4E-09 79.0 13.0 100 215-316 6-183 (535)
264 2r9z_A Glutathione amide reduc 98.0 2.7E-05 9.1E-10 78.7 11.4 98 43-190 166-266 (463)
265 3lov_A Protoporphyrinogen oxid 98.0 3.2E-06 1.1E-10 85.9 4.6 42 43-84 4-47 (475)
266 3c96_A Flavin-containing monoo 98.0 5E-05 1.7E-09 75.4 13.1 103 215-318 5-171 (410)
267 3ic9_A Dihydrolipoamide dehydr 98.0 6.7E-05 2.3E-09 76.4 14.3 97 43-189 174-275 (492)
268 2gqw_A Ferredoxin reductase; f 98.0 9.5E-06 3.2E-10 80.6 7.8 99 214-319 7-116 (408)
269 1onf_A GR, grase, glutathione 98.0 2.5E-05 8.7E-10 79.7 11.1 98 43-190 176-277 (500)
270 2qa2_A CABE, polyketide oxygen 98.0 5.6E-05 1.9E-09 77.0 13.6 102 214-317 12-167 (499)
271 2qa1_A PGAE, polyketide oxygen 98.0 5.9E-05 2E-09 76.9 13.5 101 215-317 12-166 (500)
272 4b1b_A TRXR, thioredoxin reduc 98.0 3.6E-05 1.2E-09 78.9 11.9 95 43-189 223-320 (542)
273 1c0p_A D-amino acid oxidase; a 98.0 6.6E-06 2.3E-10 80.4 6.1 36 41-76 4-39 (363)
274 3fmw_A Oxygenase; mithramycin, 98.0 2.8E-05 9.4E-10 80.6 11.0 100 215-317 50-208 (570)
275 1y0p_A Fumarate reductase flav 98.0 5.7E-05 2E-09 78.4 13.5 102 215-317 127-318 (571)
276 1zmd_A Dihydrolipoyl dehydroge 98.0 3E-05 1E-09 78.7 11.1 99 43-189 178-283 (474)
277 2bc0_A NADH oxidase; flavoprot 98.0 1.1E-05 3.9E-10 82.1 7.8 103 214-320 35-153 (490)
278 2qae_A Lipoamide, dihydrolipoy 98.0 3.1E-05 1.1E-09 78.4 11.0 98 43-189 174-277 (468)
279 1dxl_A Dihydrolipoamide dehydr 98.0 1.9E-05 6.4E-10 80.1 9.2 98 43-189 177-280 (470)
280 2xdo_A TETX2 protein; tetracyc 97.9 2.6E-05 8.8E-10 77.2 9.9 101 214-319 26-185 (398)
281 3qj4_A Renalase; FAD/NAD(P)-bi 97.9 2.9E-05 9.8E-10 75.1 9.9 95 215-314 2-163 (342)
282 1mo9_A ORF3; nucleotide bindin 97.9 3.4E-05 1.2E-09 79.2 11.0 96 44-190 215-318 (523)
283 3ces_A MNMG, tRNA uridine 5-ca 97.9 5E-05 1.7E-09 78.6 12.0 98 215-318 29-183 (651)
284 3cp8_A TRNA uridine 5-carboxym 97.9 6.3E-05 2.1E-09 77.8 12.4 98 214-317 21-175 (641)
285 2gjc_A Thiazole biosynthetic e 97.9 9E-05 3.1E-09 70.3 12.5 161 215-377 66-321 (326)
286 1fec_A Trypanothione reductase 97.9 3.2E-05 1.1E-09 78.8 9.9 97 43-190 187-290 (490)
287 2hqm_A GR, grase, glutathione 97.9 3.8E-05 1.3E-09 78.0 10.5 98 43-190 185-287 (479)
288 2wpf_A Trypanothione reductase 97.9 3.6E-05 1.2E-09 78.4 10.1 96 43-189 191-293 (495)
289 1ojt_A Surface protein; redox- 97.9 2E-05 6.9E-10 80.1 7.9 96 43-189 185-287 (482)
290 1qo8_A Flavocytochrome C3 fuma 97.9 7.4E-05 2.5E-09 77.5 12.3 102 215-317 122-313 (566)
291 2zxi_A TRNA uridine 5-carboxym 97.9 9.4E-05 3.2E-09 76.3 12.4 98 215-318 28-182 (637)
292 1w4x_A Phenylacetone monooxyge 97.9 7.6E-05 2.6E-09 77.0 11.9 99 215-318 17-158 (542)
293 1d4d_A Flavocytochrome C fumar 97.9 0.00012 4.2E-09 75.8 13.5 103 214-317 126-318 (572)
294 1xdi_A RV3303C-LPDA; reductase 97.9 4.3E-05 1.5E-09 78.0 9.9 96 43-189 182-280 (499)
295 3cgb_A Pyridine nucleotide-dis 97.8 2.9E-05 9.9E-10 78.9 8.4 103 215-319 37-155 (480)
296 3l8k_A Dihydrolipoyl dehydroge 97.8 5.7E-05 2E-09 76.4 10.4 97 216-320 6-148 (466)
297 3urh_A Dihydrolipoyl dehydroge 97.8 8.6E-05 2.9E-09 75.6 11.8 98 43-189 198-301 (491)
298 3dgz_A Thioredoxin reductase 2 97.8 8.2E-05 2.8E-09 75.7 11.6 97 43-189 185-288 (488)
299 4g6h_A Rotenone-insensitive NA 97.8 2.7E-05 9.1E-10 79.4 7.8 105 215-320 43-173 (502)
300 4hb9_A Similarities with proba 97.8 8.4E-05 2.9E-09 73.6 11.1 97 216-317 3-167 (412)
301 1b37_A Protein (polyamine oxid 97.8 1.2E-05 4.1E-10 81.5 5.0 43 42-84 3-46 (472)
302 2vdc_G Glutamate synthase [NAD 97.8 8.4E-06 2.9E-10 82.0 3.4 89 213-315 121-218 (456)
303 3lad_A Dihydrolipoamide dehydr 97.8 0.00014 4.9E-09 73.7 12.5 98 43-189 180-281 (476)
304 2z3y_A Lysine-specific histone 97.8 2E-05 6.7E-10 83.3 5.5 43 41-83 105-147 (662)
305 4dna_A Probable glutathione re 97.8 0.00019 6.4E-09 72.5 12.6 95 43-189 170-269 (463)
306 3dk9_A Grase, GR, glutathione 97.7 0.00015 5.2E-09 73.5 11.5 98 43-189 187-294 (478)
307 1zk7_A HGII, reductase, mercur 97.7 0.00015 5.3E-09 73.2 11.3 101 214-320 4-154 (467)
308 2qcu_A Aerobic glycerol-3-phos 97.7 0.00031 1.1E-08 71.6 13.5 60 257-316 151-210 (501)
309 2r0c_A REBC; flavin adenine di 97.7 0.00036 1.2E-08 72.0 14.2 99 215-316 27-196 (549)
310 3c4a_A Probable tryptophan hyd 97.7 2.3E-05 8E-10 77.0 5.0 35 44-78 1-37 (381)
311 2xag_A Lysine-specific histone 97.7 3E-05 1E-09 83.5 6.0 42 41-82 276-317 (852)
312 3g3e_A D-amino-acid oxidase; F 97.7 1.8E-05 6E-10 76.9 3.8 34 44-77 1-40 (351)
313 1m6i_A Programmed cell death p 97.7 0.00013 4.5E-09 74.2 10.3 97 43-189 180-283 (493)
314 1y56_A Hypothetical protein PH 97.7 4.6E-05 1.6E-09 77.6 6.9 101 215-319 109-222 (493)
315 3o0h_A Glutathione reductase; 97.7 0.00016 5.6E-09 73.4 10.5 96 43-189 191-289 (484)
316 3dgh_A TRXR-1, thioredoxin red 97.6 0.0002 6.9E-09 72.7 11.0 97 43-189 187-290 (483)
317 2gmh_A Electron transfer flavo 97.6 0.00045 1.5E-08 71.8 13.1 103 215-317 36-218 (584)
318 1cjc_A Protein (adrenodoxin re 97.6 3.1E-05 1.1E-09 78.0 4.2 90 213-316 5-106 (460)
319 3qfa_A Thioredoxin reductase 1 97.6 0.00034 1.2E-08 71.6 11.9 97 43-189 210-316 (519)
320 2x8g_A Thioredoxin glutathione 97.6 0.00033 1.1E-08 73.1 11.7 33 43-75 286-318 (598)
321 1pn0_A Phenol 2-monooxygenase; 97.6 3.4E-05 1.1E-09 81.5 3.7 35 43-77 8-47 (665)
322 3c4n_A Uncharacterized protein 97.5 0.00011 3.6E-09 72.9 6.9 54 257-316 174-236 (405)
323 2dkh_A 3-hydroxybenzoate hydro 97.5 0.00052 1.8E-08 72.1 12.3 102 215-316 33-211 (639)
324 1lqt_A FPRA; NADP+ derivative, 97.5 3.5E-05 1.2E-09 77.6 2.9 88 214-315 3-107 (456)
325 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00012 4E-09 77.7 6.8 87 214-320 373-471 (671)
326 4at0_A 3-ketosteroid-delta4-5a 97.5 0.00079 2.7E-08 68.8 12.6 59 256-316 203-264 (510)
327 3jsk_A Cypbp37 protein; octame 97.5 0.0012 4E-08 63.0 12.8 163 215-378 80-332 (344)
328 3ka7_A Oxidoreductase; structu 97.5 0.0014 4.7E-08 65.2 14.2 35 215-249 1-35 (425)
329 1pn0_A Phenol 2-monooxygenase; 97.5 0.00086 2.9E-08 70.7 12.9 102 215-316 9-230 (665)
330 3k30_A Histamine dehydrogenase 97.4 0.00055 1.9E-08 72.7 11.4 99 43-189 523-625 (690)
331 1gte_A Dihydropyrimidine dehyd 97.4 4.9E-05 1.7E-09 84.3 3.0 93 214-318 187-290 (1025)
332 3nrn_A Uncharacterized protein 97.4 0.001 3.5E-08 66.1 12.2 48 263-317 197-244 (421)
333 2gag_A Heterotetrameric sarcos 97.4 0.00068 2.3E-08 74.6 11.6 106 214-319 128-256 (965)
334 2aqj_A Tryptophan halogenase, 97.3 0.0017 5.7E-08 66.9 13.2 53 260-318 170-224 (538)
335 2e5v_A L-aspartate oxidase; ar 97.3 0.0011 3.9E-08 66.8 11.6 98 216-318 1-178 (472)
336 1kdg_A CDH, cellobiose dehydro 97.3 0.00018 6E-09 74.3 5.1 37 41-77 5-41 (546)
337 1kf6_A Fumarate reductase flav 97.3 0.0019 6.5E-08 67.2 12.7 99 216-314 7-195 (602)
338 1vg0_A RAB proteins geranylger 97.2 0.00038 1.3E-08 72.0 6.0 44 40-83 5-48 (650)
339 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00013 4.3E-09 76.6 2.2 36 43-78 56-100 (721)
340 3q9t_A Choline dehydrogenase a 97.1 0.00025 8.6E-09 73.2 4.3 37 41-77 4-41 (577)
341 3t37_A Probable dehydrogenase; 97.1 0.00027 9.4E-09 72.5 4.2 37 41-77 15-52 (526)
342 4b63_A L-ornithine N5 monooxyg 97.1 0.0026 9E-08 64.6 11.2 105 216-320 41-218 (501)
343 1ju2_A HydroxynitrIle lyase; f 97.1 0.00019 6.4E-09 73.8 2.7 35 42-77 25-59 (536)
344 3c4a_A Probable tryptophan hyd 97.0 0.00029 1E-08 69.1 3.6 87 215-317 1-144 (381)
345 1o94_A Tmadh, trimethylamine d 97.0 0.0015 5.2E-08 69.7 9.2 98 43-189 528-647 (729)
346 2wdq_A Succinate dehydrogenase 97.0 0.0075 2.6E-07 62.5 13.8 56 261-316 149-206 (588)
347 2weu_A Tryptophan 5-halogenase 96.9 0.0059 2E-07 62.3 12.4 52 261-318 179-232 (511)
348 1n4w_A CHOD, cholesterol oxida 96.9 0.0007 2.4E-08 69.0 5.1 37 43-79 5-41 (504)
349 2pyx_A Tryptophan halogenase; 96.9 0.0083 2.8E-07 61.4 13.0 51 262-318 182-235 (526)
350 3qvp_A Glucose oxidase; oxidor 96.9 0.00061 2.1E-08 70.3 4.2 35 42-76 18-53 (583)
351 2h88_A Succinate dehydrogenase 96.9 0.0081 2.8E-07 62.5 12.7 53 264-316 164-217 (621)
352 1coy_A Cholesterol oxidase; ox 96.9 0.00083 2.9E-08 68.5 5.2 37 41-77 9-45 (507)
353 4gde_A UDP-galactopyranose mut 96.8 0.0014 4.9E-08 66.8 6.8 35 215-249 11-46 (513)
354 1chu_A Protein (L-aspartate ox 96.8 0.0045 1.5E-07 63.5 10.3 33 215-248 9-41 (540)
355 3axb_A Putative oxidoreductase 96.7 0.0038 1.3E-07 62.5 8.7 31 215-245 24-55 (448)
356 2bs2_A Quinol-fumarate reducta 96.7 0.015 5.1E-07 61.0 13.2 54 263-316 166-220 (660)
357 3fim_B ARYL-alcohol oxidase; A 96.6 0.00082 2.8E-08 69.2 3.1 36 43-78 2-38 (566)
358 3i6d_A Protoporphyrinogen oxid 96.6 0.0067 2.3E-07 61.0 9.8 41 270-315 248-288 (470)
359 1gpe_A Protein (glucose oxidas 96.5 0.0017 5.7E-08 67.4 4.8 36 42-77 23-59 (587)
360 2jbv_A Choline oxidase; alcoho 96.4 0.0019 6.4E-08 66.5 4.4 37 42-78 12-49 (546)
361 1jnr_A Adenylylsulfate reducta 96.3 0.024 8.3E-07 59.4 12.1 53 264-316 160-218 (643)
362 3kkj_A Amine oxidase, flavin-c 96.0 0.0051 1.8E-07 56.5 4.9 34 216-249 4-37 (336)
363 2g1u_A Hypothetical protein TM 96.0 0.0074 2.5E-07 50.6 5.2 39 37-75 13-51 (155)
364 3gyx_A Adenylylsulfate reducta 95.8 0.021 7.3E-07 59.8 8.7 32 215-246 23-60 (662)
365 3llv_A Exopolyphosphatase-rela 95.7 0.012 4.2E-07 48.2 5.3 33 43-75 6-38 (141)
366 3fwz_A Inner membrane protein 95.7 0.017 5.8E-07 47.4 6.0 33 43-75 7-39 (140)
367 4dgk_A Phytoene dehydrogenase; 95.4 0.01 3.4E-07 60.3 4.4 35 215-249 2-36 (501)
368 1lss_A TRK system potassium up 95.2 0.021 7.2E-07 46.5 5.0 32 44-75 5-36 (140)
369 1id1_A Putative potassium chan 95.0 0.034 1.2E-06 46.3 5.6 32 44-75 4-35 (153)
370 3ic5_A Putative saccharopine d 94.9 0.028 9.4E-07 44.2 4.7 32 44-75 6-38 (118)
371 3oz2_A Digeranylgeranylglycero 94.6 0.029 9.8E-07 54.6 5.1 34 216-249 6-39 (397)
372 2hmt_A YUAA protein; RCK, KTN, 94.6 0.035 1.2E-06 45.3 4.7 32 44-75 7-38 (144)
373 3ihm_A Styrene monooxygenase A 94.0 0.042 1.5E-06 54.5 4.8 35 213-247 21-55 (430)
374 2iid_A L-amino-acid oxidase; f 94.0 0.047 1.6E-06 55.2 5.1 61 213-273 32-110 (498)
375 3dfz_A SIRC, precorrin-2 dehyd 93.9 0.055 1.9E-06 48.0 4.7 34 42-75 30-63 (223)
376 3nix_A Flavoprotein/dehydrogen 93.7 0.04 1.4E-06 54.3 3.9 33 215-247 6-38 (421)
377 3eag_A UDP-N-acetylmuramate:L- 93.6 0.042 1.4E-06 52.3 3.7 77 214-320 4-82 (326)
378 2g1u_A Hypothetical protein TM 93.6 0.091 3.1E-06 43.7 5.4 37 212-248 17-53 (155)
379 3g5s_A Methylenetetrahydrofola 93.6 0.063 2.2E-06 51.8 4.8 33 215-247 2-34 (443)
380 3c85_A Putative glutathione-re 93.5 0.083 2.8E-06 45.3 5.1 33 43-75 39-72 (183)
381 3l4b_C TRKA K+ channel protien 93.4 0.068 2.3E-06 47.4 4.5 31 45-75 2-32 (218)
382 3dme_A Conserved exported prot 93.4 0.073 2.5E-06 51.2 5.1 34 215-248 5-38 (369)
383 3k7m_X 6-hydroxy-L-nicotine ox 93.3 0.072 2.5E-06 52.7 5.1 34 216-249 3-36 (431)
384 3v76_A Flavoprotein; structura 93.3 0.069 2.4E-06 52.7 4.9 36 214-249 27-62 (417)
385 2e1m_A L-glutamate oxidase; L- 93.2 0.091 3.1E-06 50.8 5.4 37 213-249 43-80 (376)
386 3lk7_A UDP-N-acetylmuramoylala 93.2 0.05 1.7E-06 54.3 3.7 80 213-320 8-88 (451)
387 3fwz_A Inner membrane protein 93.2 0.2 6.9E-06 40.8 6.8 35 213-247 6-40 (140)
388 3nks_A Protoporphyrinogen oxid 93.2 0.079 2.7E-06 53.2 5.2 35 215-249 3-39 (477)
389 1kyq_A Met8P, siroheme biosynt 93.0 0.058 2E-06 49.5 3.5 34 42-75 12-45 (274)
390 4dio_A NAD(P) transhydrogenase 93.0 0.098 3.3E-06 50.7 5.2 33 43-75 190-222 (405)
391 3cgv_A Geranylgeranyl reductas 93.0 0.087 3E-06 51.3 5.1 34 216-249 6-39 (397)
392 1ryi_A Glycine oxidase; flavop 93.0 0.083 2.9E-06 51.2 4.9 33 215-247 18-50 (382)
393 3lk7_A UDP-N-acetylmuramoylala 93.0 0.11 3.6E-06 51.9 5.7 33 43-75 9-41 (451)
394 2oln_A NIKD protein; flavoprot 93.0 0.083 2.9E-06 51.6 4.9 33 216-248 6-38 (397)
395 4e12_A Diketoreductase; oxidor 93.0 0.11 3.7E-06 48.3 5.3 33 43-75 4-36 (283)
396 2x5o_A UDP-N-acetylmuramoylala 92.9 0.065 2.2E-06 53.3 4.0 33 44-76 6-38 (439)
397 2b9w_A Putative aminooxidase; 92.9 0.092 3.1E-06 51.8 5.1 36 214-249 6-42 (424)
398 2uzz_A N-methyl-L-tryptophan o 92.8 0.071 2.4E-06 51.5 4.1 33 216-248 4-36 (372)
399 3dfz_A SIRC, precorrin-2 dehyd 92.8 0.31 1.1E-05 43.2 7.7 75 212-316 29-103 (223)
400 2gf3_A MSOX, monomeric sarcosi 92.7 0.096 3.3E-06 50.9 4.9 34 215-248 4-37 (389)
401 2jae_A L-amino acid oxidase; o 92.7 0.12 4.2E-06 52.0 5.8 36 214-249 11-46 (489)
402 2bcg_G Secretory pathway GDP d 92.6 0.094 3.2E-06 52.3 4.8 36 215-250 12-47 (453)
403 1rsg_A FMS1 protein; FAD bindi 92.6 0.1 3.5E-06 53.1 5.1 35 215-249 9-44 (516)
404 2a9f_A Putative malic enzyme ( 92.5 0.1 3.5E-06 50.1 4.5 34 42-75 187-221 (398)
405 1y56_B Sarcosine oxidase; dehy 92.4 0.1 3.5E-06 50.6 4.6 33 215-247 6-38 (382)
406 1s3e_A Amine oxidase [flavin-c 92.4 0.11 3.7E-06 53.0 4.9 35 215-249 5-39 (520)
407 1c0p_A D-amino acid oxidase; a 92.4 0.12 4E-06 49.8 5.0 32 215-246 7-38 (363)
408 3eag_A UDP-N-acetylmuramate:L- 92.1 0.16 5.5E-06 48.2 5.4 33 43-75 4-37 (326)
409 3ado_A Lambda-crystallin; L-gu 92.1 0.14 4.8E-06 48.1 4.9 33 43-75 6-38 (319)
410 2bi7_A UDP-galactopyranose mut 92.1 0.14 4.8E-06 49.8 5.0 35 215-249 4-38 (384)
411 2ivd_A PPO, PPOX, protoporphyr 92.0 0.13 4.4E-06 51.7 4.9 36 214-249 16-51 (478)
412 3p2y_A Alanine dehydrogenase/p 92.0 0.11 3.9E-06 49.9 4.2 33 43-75 184-216 (381)
413 3nyc_A D-arginine dehydrogenas 92.0 0.12 4E-06 50.0 4.4 35 214-249 9-43 (381)
414 1t2d_A LDH-P, L-lactate dehydr 91.9 0.18 6.1E-06 47.7 5.4 33 43-75 4-37 (322)
415 2vvm_A Monoamine oxidase N; FA 91.9 0.24 8E-06 50.0 6.7 42 43-84 39-80 (495)
416 1vl6_A Malate oxidoreductase; 91.8 0.14 4.8E-06 49.0 4.5 34 42-75 191-225 (388)
417 3hdq_A UDP-galactopyranose mut 91.7 0.16 5.6E-06 49.5 5.1 36 214-249 29-64 (397)
418 2yg5_A Putrescine oxidase; oxi 91.7 0.15 5.3E-06 50.7 5.1 58 215-273 6-80 (453)
419 2ewd_A Lactate dehydrogenase,; 91.7 0.16 5.5E-06 48.0 4.9 33 43-75 4-37 (317)
420 2gag_B Heterotetrameric sarcos 91.7 0.13 4.6E-06 50.1 4.5 33 215-247 22-56 (405)
421 1sez_A Protoporphyrinogen oxid 91.7 0.16 5.6E-06 51.3 5.3 36 214-249 13-48 (504)
422 4g65_A TRK system potassium up 91.7 0.085 2.9E-06 52.7 3.0 34 43-76 3-36 (461)
423 2e4g_A Tryptophan halogenase; 91.6 0.11 3.9E-06 53.2 4.0 34 214-247 25-61 (550)
424 4ffl_A PYLC; amino acid, biosy 91.6 0.18 6.1E-06 48.6 5.2 34 43-76 1-34 (363)
425 1bg6_A N-(1-D-carboxylethyl)-L 91.6 0.16 5.6E-06 48.7 4.9 31 44-74 5-35 (359)
426 1pzg_A LDH, lactate dehydrogen 91.5 0.18 6.2E-06 47.9 5.0 32 44-75 10-42 (331)
427 1lld_A L-lactate dehydrogenase 91.4 0.18 6.3E-06 47.5 4.9 32 44-75 8-41 (319)
428 3dje_A Fructosyl amine: oxygen 91.3 0.16 5.5E-06 50.3 4.6 35 215-249 7-42 (438)
429 3i83_A 2-dehydropantoate 2-red 91.3 0.19 6.5E-06 47.5 4.9 31 44-74 3-33 (320)
430 3ghy_A Ketopantoate reductase 91.2 0.21 7.1E-06 47.6 5.1 31 44-74 4-34 (335)
431 2dpo_A L-gulonate 3-dehydrogen 91.2 0.2 6.8E-06 47.3 4.9 33 43-75 6-38 (319)
432 3fpz_A Thiazole biosynthetic e 91.2 0.16 5.6E-06 48.1 4.4 64 214-277 65-138 (326)
433 1v0j_A UDP-galactopyranose mut 91.1 0.17 5.7E-06 49.6 4.4 35 215-249 8-43 (399)
434 3g3e_A D-amino-acid oxidase; F 91.1 0.15 5.1E-06 48.8 4.0 32 216-247 2-39 (351)
435 1i8t_A UDP-galactopyranose mut 91.0 0.2 6.8E-06 48.4 4.9 34 216-249 3-36 (367)
436 2hjr_A Malate dehydrogenase; m 91.0 0.25 8.5E-06 46.8 5.3 32 44-75 15-47 (328)
437 1id1_A Putative potassium chan 90.9 0.26 8.9E-06 40.7 4.9 33 214-246 3-35 (153)
438 1x13_A NAD(P) transhydrogenase 90.9 0.21 7.1E-06 48.8 4.9 33 43-75 172-204 (401)
439 3hn2_A 2-dehydropantoate 2-red 90.9 0.21 7.1E-06 47.1 4.7 31 44-74 3-33 (312)
440 3ps9_A TRNA 5-methylaminomethy 90.9 0.2 6.7E-06 52.9 5.0 35 215-249 273-307 (676)
441 3pvc_A TRNA 5-methylaminomethy 90.9 0.19 6.5E-06 53.1 4.9 36 214-249 264-299 (689)
442 2raf_A Putative dinucleotide-b 90.8 0.26 8.9E-06 43.3 5.1 35 43-77 19-53 (209)
443 3lov_A Protoporphyrinogen oxid 90.8 0.21 7E-06 50.1 4.9 35 215-249 5-41 (475)
444 3vtf_A UDP-glucose 6-dehydroge 90.8 0.23 7.8E-06 48.9 5.0 39 37-75 15-53 (444)
445 3llv_A Exopolyphosphatase-rela 90.8 0.22 7.4E-06 40.5 4.2 34 214-247 6-39 (141)
446 1l7d_A Nicotinamide nucleotide 90.8 0.25 8.5E-06 48.0 5.3 33 43-75 172-204 (384)
447 2ew2_A 2-dehydropantoate 2-red 90.7 0.22 7.4E-06 46.8 4.8 31 44-74 4-34 (316)
448 1f0y_A HCDH, L-3-hydroxyacyl-C 90.7 0.27 9.4E-06 45.9 5.4 32 44-75 16-47 (302)
449 1ks9_A KPA reductase;, 2-dehyd 90.6 0.25 8.7E-06 45.7 5.1 32 45-76 2-33 (291)
450 3doj_A AT3G25530, dehydrogenas 90.6 0.26 8.9E-06 46.3 5.2 36 40-75 18-53 (310)
451 1pjc_A Protein (L-alanine dehy 90.4 0.24 8.3E-06 47.7 4.8 32 44-75 168-199 (361)
452 1lss_A TRK system potassium up 90.3 0.29 1E-05 39.4 4.6 33 215-247 5-37 (140)
453 3ic5_A Putative saccharopine d 90.2 0.24 8.1E-06 38.5 3.9 34 214-247 5-39 (118)
454 2rgh_A Alpha-glycerophosphate 90.1 0.23 7.7E-06 51.2 4.6 34 214-247 32-65 (571)
455 2z3y_A Lysine-specific histone 90.1 0.29 1E-05 51.4 5.5 36 213-248 106-141 (662)
456 3phh_A Shikimate dehydrogenase 90.1 0.34 1.2E-05 44.3 5.2 33 43-75 118-150 (269)
457 1jw9_B Molybdopterin biosynthe 90.1 0.23 7.8E-06 45.0 4.1 32 44-75 32-64 (249)
458 3oj0_A Glutr, glutamyl-tRNA re 89.9 0.14 4.8E-06 41.9 2.3 32 43-74 21-52 (144)
459 2xag_A Lysine-specific histone 89.9 0.3 1E-05 52.6 5.4 36 214-249 278-313 (852)
460 3l6d_A Putative oxidoreductase 89.9 0.41 1.4E-05 44.8 5.9 35 41-75 7-41 (306)
461 3gvi_A Malate dehydrogenase; N 89.8 0.36 1.2E-05 45.6 5.3 33 43-75 7-40 (324)
462 1d5t_A Guanine nucleotide diss 89.8 0.35 1.2E-05 47.8 5.5 46 40-85 3-48 (433)
463 1kyq_A Met8P, siroheme biosynt 89.8 0.3 1E-05 44.8 4.5 36 212-247 11-46 (274)
464 3p1w_A Rabgdi protein; GDI RAB 89.7 0.45 1.5E-05 47.4 6.2 56 255-315 256-313 (475)
465 3qha_A Putative oxidoreductase 89.7 0.29 9.8E-06 45.7 4.6 34 43-76 15-48 (296)
466 3g0o_A 3-hydroxyisobutyrate de 89.6 0.33 1.1E-05 45.4 4.9 33 43-75 7-39 (303)
467 3g79_A NDP-N-acetyl-D-galactos 89.6 0.28 9.7E-06 48.9 4.6 35 43-77 18-54 (478)
468 2y0c_A BCEC, UDP-glucose dehyd 89.5 0.31 1.1E-05 48.8 4.9 33 43-75 8-40 (478)
469 3l9w_A Glutathione-regulated p 89.5 0.37 1.3E-05 47.2 5.3 32 44-75 5-36 (413)
470 2v6b_A L-LDH, L-lactate dehydr 89.4 0.34 1.2E-05 45.4 4.8 31 45-75 2-34 (304)
471 3da1_A Glycerol-3-phosphate de 89.3 0.3 1E-05 50.1 4.8 34 214-247 18-51 (561)
472 4hv4_A UDP-N-acetylmuramate--L 89.3 0.34 1.2E-05 48.8 5.0 77 212-320 20-97 (494)
473 2vns_A Metalloreductase steap3 89.2 0.44 1.5E-05 42.0 5.2 33 43-75 28-60 (215)
474 2hmt_A YUAA protein; RCK, KTN, 89.2 0.33 1.1E-05 39.3 4.1 33 214-246 6-38 (144)
475 1nyt_A Shikimate 5-dehydrogena 89.2 0.4 1.4E-05 44.0 5.0 32 43-74 119-150 (271)
476 1pjq_A CYSG, siroheme synthase 89.1 0.33 1.1E-05 48.4 4.7 33 43-75 12-44 (457)
477 3g17_A Similar to 2-dehydropan 89.1 0.28 9.6E-06 45.7 4.0 32 44-75 3-34 (294)
478 4e21_A 6-phosphogluconate dehy 89.1 0.37 1.3E-05 46.2 4.9 36 40-75 19-54 (358)
479 2aef_A Calcium-gated potassium 89.0 0.15 5.3E-06 45.6 2.1 33 42-75 8-40 (234)
480 2eez_A Alanine dehydrogenase; 88.9 0.42 1.4E-05 46.1 5.3 32 44-75 167-198 (369)
481 4dsg_A UDP-galactopyranose mut 88.8 0.37 1.3E-05 48.5 4.9 36 214-249 9-45 (484)
482 3k96_A Glycerol-3-phosphate de 88.7 0.45 1.5E-05 45.6 5.2 33 43-75 29-61 (356)
483 3e8x_A Putative NAD-dependent 88.7 0.44 1.5E-05 42.5 4.9 34 42-75 20-54 (236)
484 3ado_A Lambda-crystallin; L-gu 88.6 0.25 8.6E-06 46.4 3.2 35 214-248 6-40 (319)
485 3k5i_A Phosphoribosyl-aminoimi 88.5 0.38 1.3E-05 47.1 4.6 37 37-73 18-54 (403)
486 3tl2_A Malate dehydrogenase; c 88.5 0.5 1.7E-05 44.3 5.3 33 42-74 7-40 (315)
487 3gg2_A Sugar dehydrogenase, UD 88.4 0.4 1.4E-05 47.6 4.8 32 44-75 3-34 (450)
488 3qsg_A NAD-binding phosphogluc 88.4 0.32 1.1E-05 45.7 3.9 34 42-75 23-57 (312)
489 3hg7_A D-isomer specific 2-hyd 88.4 1.2 4.1E-05 41.9 7.8 35 214-248 140-174 (324)
490 3dtt_A NADP oxidoreductase; st 88.4 0.51 1.7E-05 42.5 5.1 34 42-75 18-51 (245)
491 1y6j_A L-lactate dehydrogenase 88.3 0.47 1.6E-05 44.7 5.0 33 43-75 7-41 (318)
492 2q3e_A UDP-glucose 6-dehydroge 88.3 0.36 1.2E-05 48.2 4.4 34 42-75 4-39 (467)
493 2vhw_A Alanine dehydrogenase; 88.3 0.5 1.7E-05 45.7 5.3 33 43-75 168-200 (377)
494 3dhn_A NAD-dependent epimerase 88.3 0.36 1.2E-05 42.7 4.0 33 43-75 4-37 (227)
495 3cky_A 2-hydroxymethyl glutara 88.2 0.44 1.5E-05 44.4 4.8 32 43-74 4-35 (301)
496 3gpi_A NAD-dependent epimerase 88.2 0.6 2.1E-05 43.0 5.7 33 44-76 4-36 (286)
497 2uyy_A N-PAC protein; long-cha 88.1 0.59 2E-05 43.9 5.6 33 43-75 30-62 (316)
498 3pid_A UDP-glucose 6-dehydroge 88.0 0.44 1.5E-05 46.8 4.7 35 40-75 33-67 (432)
499 1guz_A Malate dehydrogenase; o 88.0 0.5 1.7E-05 44.3 5.0 31 45-75 2-34 (310)
500 2egg_A AROE, shikimate 5-dehyd 88.0 0.49 1.7E-05 44.1 4.8 32 43-74 141-173 (297)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.5e-79 Score=630.72 Aligned_cols=458 Identities=26% Similarity=0.378 Sum_probs=382.9
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC--------CCCCceeccccccchhhhhhhhHHHHHHHhhhhhC
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR--------GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH 110 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~--------~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 110 (507)
+...+|||+||||||||+.||.+++++|.+|+|||+. ..+||+|+|+||+|+|.++...+.+.........+
T Consensus 38 ~~~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~ 117 (542)
T 4b1b_A 38 EHTYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAY 117 (542)
T ss_dssp -CCSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhc
Confidence 3445799999999999999999999999999999963 35899999999999999999888877766556678
Q ss_pred CcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccC--CceEEEEeCeEEEccCCCC
Q 010573 111 GVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIE--GGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 111 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~--g~~~~~~~d~lvlAtG~~p 188 (507)
|+......+||.++..+.+..++++...+...+++.+|+++.+.+.+++++++.|...+ +..+.+.+|++|||||++|
T Consensus 118 Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P 197 (542)
T 4b1b_A 118 GWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRP 197 (542)
T ss_dssp TEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEE
T ss_pred CcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCC
Confidence 88888888999999999999999999888899999999999999999999999886543 3467899999999999999
Q ss_pred CCCCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc
Q 010573 189 KSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268 (507)
Q Consensus 189 ~~~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~ 268 (507)
..||........++++++++.+++.|++++|||+|++|+|+|..|+++|++||++++ +++++.+|+++.+.+.+.|++.
T Consensus 198 ~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~ 276 (542)
T 4b1b_A 198 HIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQ 276 (542)
T ss_dssp CCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHT
T ss_pred CCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccccchhHHHHHHHHHHhh
Confidence 877766655667889999999999999999999999999999999999999999986 5678999999999999999999
Q ss_pred CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCe-ecCCCCCCCCC
Q 010573 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRI-PVNERFATNIP 347 (507)
Q Consensus 269 Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i-~Vd~~~~t~~~ 347 (507)
||++++++.+++++..++.+.+.+. ++.++.+|.|++|+|++||++.|+++.+|+.++.+|++ .||+++|||+|
T Consensus 277 gi~~~~~~~v~~~~~~~~~~~v~~~-----~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p 351 (542)
T 4b1b_A 277 GVMFKNGILPKKLTKMDDKILVEFS-----DKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIP 351 (542)
T ss_dssp TCEEEETCCEEEEEEETTEEEEEET-----TSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSST
T ss_pred cceeecceEEEEEEecCCeEEEEEc-----CCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCC
Confidence 9999999999999998888888875 45678899999999999999999999999999876665 78999999999
Q ss_pred CeEEecCCCCC-CCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcc
Q 010573 348 GVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLAN 425 (507)
Q Consensus 348 ~IyA~GD~a~~-~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~ 425 (507)
+|||+|||+++ |++++.|.+||+++++|+++.. ...+|..+|+++|++|++++||+||++|++.+.++.+..+++...
T Consensus 352 ~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~ 431 (542)
T 4b1b_A 352 SIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFN 431 (542)
T ss_dssp TEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC---
T ss_pred CeEEeccccCCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeecc
Confidence 99999999965 7899999999999999999865 446899999999999999999999999999877655555444322
Q ss_pred cch-----------------hhcCCcceEEEEEE-ECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCC
Q 010573 426 SRA-----------------KAIDDAEGIVKILA-EKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHP 487 (507)
Q Consensus 426 ~~~-----------------~~~~~~~~~~k~~~-~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p 487 (507)
.++ ....+++||+|+++ ++++++|||+|++|++|.|+|+.+++||++++|++||++++++||
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HP 511 (542)
T 4b1b_A 432 NLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHP 511 (542)
T ss_dssp --------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC-----
T ss_pred chhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCC
Confidence 221 12245679999986 557899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhcc
Q 010573 488 TMSEALKEAAMATHD 502 (507)
Q Consensus 488 ~~~~~~~~~~~~~~~ 502 (507)
|++|+|.+++.++..
T Consensus 512 TlsE~l~~~~~t~~~ 526 (542)
T 4b1b_A 512 TDAESFMNLFVTISS 526 (542)
T ss_dssp ---------------
T ss_pred CHHHHHHHHHHHHHc
Confidence 999999999887643
No 2
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.6e-78 Score=620.57 Aligned_cols=470 Identities=57% Similarity=0.941 Sum_probs=429.4
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCc
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS 116 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (507)
+.+++.+|||+||||||||++||..|++.|++|+|||+++.+||+|.+.+|+|++.+......+......+..+|+....
T Consensus 19 ~~~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~ 98 (491)
T 3urh_A 19 YFQSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVAN 98 (491)
T ss_dssp -------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCC
T ss_pred chhhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCC
Confidence 44455569999999999999999999999999999999899999999999999999999888888777767788888777
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCc-
Q 010573 117 VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT- 195 (507)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~- 195 (507)
..++|..+..+.+.....+...+...+++.+++++.+.+.+++++.+.+.+.+|+...+.||+||||||++|+.+|+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~ 178 (491)
T 3urh_A 99 PKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEV 178 (491)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCccc
Confidence 8899999999999999999888888999999999999999999999999988876678999999999999998888876
Q ss_pred -cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 010573 196 -IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
.++..++++.+...+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~ 258 (491)
T 3urh_A 179 AFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKL 258 (491)
T ss_dssp CCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred ccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEE
Confidence 4566788999998888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecC
Q 010573 275 KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 354 (507)
Q Consensus 275 ~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD 354 (507)
++++++++.+++++.+.+.+..+|+.+++++|.||+|+|++|++++++++..|++++++|+|.||+++||++|+|||+||
T Consensus 259 ~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD 338 (491)
T 3urh_A 259 GAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGD 338 (491)
T ss_dssp SEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGG
T ss_pred CCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEe
Confidence 99999999888888888765433445789999999999999999987778889999999999999999999999999999
Q ss_pred CCCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCc
Q 010573 355 VIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDA 434 (507)
Q Consensus 355 ~a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (507)
|++.|.+++.|..||+.||+||++...++++..+|+++|++|+++++|+||++|++.|+++.++.+++....++.+.+++
T Consensus 339 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 418 (491)
T 3urh_A 339 VVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARAMLQT 418 (491)
T ss_dssp GSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTCCCEEECSSSCEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCC
T ss_pred cCCCccchhHHHHHHHHHHHHHcCCCcccCCCCCCEEEEccCCeEEEeCCHHHHHhCCCCEEEEEEecCcchhhhcCCCC
Confidence 99999999999999999999999987778899999999999999999999999999999999999999999999988888
Q ss_pred ceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 435 EGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 435 ~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.+..+..|
T Consensus 419 ~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 490 (491)
T 3urh_A 419 DGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIH 490 (491)
T ss_dssp CCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHHHHC----
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHHhhhcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999988776655
No 3
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.2e-75 Score=602.02 Aligned_cols=463 Identities=49% Similarity=0.804 Sum_probs=426.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC------CCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG------ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS 115 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~------~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~ 115 (507)
.+|||+|||||+||++||.+|++.|++|+|||++. .+||+|.+.+|+|++.+......+......+..+|+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 35899999999999999999999999999999975 589999999999999999888888877776778888777
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCc
Q 010573 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT 195 (507)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~ 195 (507)
....++..+..+.+.....+...+..++++.+++++.+.+.+++.+.+.+...+|+...+.||+||||||++|..+|+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~ 161 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAP 161 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCC
Confidence 77899999999999999988888888888999999999999999999999887776678999999999999987667666
Q ss_pred cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcC
Q 010573 196 IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~ 275 (507)
.+...++++.++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~ 241 (476)
T 3lad_A 162 VDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLG 241 (476)
T ss_dssp CCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEET
T ss_pred CCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEEC
Confidence 56677889999988888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCC
Q 010573 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDV 355 (507)
Q Consensus 276 ~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~ 355 (507)
+++++++.+++++.+.+.+.. + .+++++|.|++|+|++|+++.+.++..|++++++|+|.||+++||++|||||+|||
T Consensus 242 ~~v~~i~~~~~~~~v~~~~~~-g-~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~ 319 (476)
T 3lad_A 242 ARVTGTEVKNKQVTVKFVDAE-G-EKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDV 319 (476)
T ss_dssp CEEEEEEECSSCEEEEEESSS-E-EEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGG
T ss_pred CEEEEEEEcCCEEEEEEEeCC-C-cEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEcc
Confidence 999999988878887775321 1 26899999999999999998776888999999999999999999999999999999
Q ss_pred CCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcc
Q 010573 356 IPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAE 435 (507)
Q Consensus 356 a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (507)
++.|.+++.|..||+.||+||++...+.++..+|+++|++|+++++|+||++|++.|+++.++.+++....++.+.+++.
T Consensus 320 ~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (476)
T 3lad_A 320 VRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTA 399 (476)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHCCCCCCTTCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCC
T ss_pred CCCcccHHHHHHHHHHHHHHhcCCCcccCCCCCCEEEECcCCEEEeeCCHHHHHhcCCCEEEEEEeccccchheecCCCc
Confidence 99999999999999999999998877788999999999999999999999999999999999999999999999888889
Q ss_pred eEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 436 GIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 436 ~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.+..++.|
T Consensus 400 ~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 470 (476)
T 3lad_A 400 GFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALAVSGHAIH 470 (476)
T ss_dssp CEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHHHHTTCCTT
T ss_pred EEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998877665
No 4
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=3.4e-73 Score=582.22 Aligned_cols=463 Identities=59% Similarity=0.960 Sum_probs=412.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCccc-CccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 121 (507)
+|||+|||||+||++||.+|++.|++|+|||+++.+||+|.+.+|+|++.+......+..+...+..+|+.. .....++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 489999999999999999999999999999998899999999999999988877776666554355667764 3456789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
..+..+.......+...+..++++.+++++.+++.+++.+.+.+.+.+|+...+.||+||+|||++|..++....+...+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v 161 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVV 161 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCce
Confidence 99999888888888888888888889999999988899999988877765578999999999999885443322233458
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHH-HhcCcEEEcCceEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSL-EKQKMKFMLKTKVVG 280 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l-~~~Gv~i~~~~~v~~ 280 (507)
++++++..+...+++++|||+|++|+|+|..+.+.|.+|+++++.+++++.+|+++.+.+.+.+ ++.||+++++++|++
T Consensus 162 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~ 241 (468)
T 2qae_A 162 LSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVG 241 (468)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEE
T ss_pred echHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEE
Confidence 8889988888889999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC-CC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GP 359 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~-~~ 359 (507)
++.+++++.+++.+ .+|+.+++++|.|++|+|++|+++++.++..|++++++|+|.||+++||+.|+|||+|||++ .+
T Consensus 242 i~~~~~~~~v~~~~-~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~ 320 (468)
T 2qae_A 242 GTNNGDSVSLEVEG-KNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGP 320 (468)
T ss_dssp EEECSSSEEEEEEC-C---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBSSSC
T ss_pred EEEcCCeEEEEEEc-CCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccCCCCC
Confidence 98877667776642 12333689999999999999999876667889999888999999999999999999999999 88
Q ss_pred CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEE
Q 010573 360 MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (507)
Q Consensus 360 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (507)
.+++.|.+||+.||.||++...++++..+|+++|++|+++++|++++++++.|+++.+..+++....++.+.+++.+|+|
T Consensus 321 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k 400 (468)
T 2qae_A 321 MLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVK 400 (468)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEE
T ss_pred ccHhHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEE
Confidence 99999999999999999987766778899999999999999999999999999999999999999999888888889999
Q ss_pred EEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 440 ILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 440 ~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
+++++++++|+|+|++|+++.|+|+.++.||++++|+++|.+++++|||++|++.++++.+..++.|
T Consensus 401 l~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 467 (468)
T 2qae_A 401 VLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALFAKTIN 467 (468)
T ss_dssp EEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHHHHHSCCSC
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHHhccccc
Confidence 9999889999999999999999999999999999999999999999999999999999888777665
No 5
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=2.9e-73 Score=583.63 Aligned_cols=464 Identities=60% Similarity=0.994 Sum_probs=412.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHH-hhhhhCCcccCccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~ 121 (507)
+|||+||||||||++||.+|++.|++|+|||+++.+||+|.+.+|+|++.+......++.+. ..+..+|+......+++
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNL 85 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCH
Confidence 48999999999999999999999999999999889999999999999998887776665544 13456777655567889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
..+..+.+...+.+...+..++++.+++++.+.+.+++.+.+.+.+.+|+..++.||+||+|||++|..+|....+...+
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~v 165 (474)
T 1zmd_A 86 DKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTI 165 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCcE
Confidence 99999988888888888888888999999999988889888888877643467999999999999886444333334457
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
+++.++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+|+++.+.+.+.+++.||+++++++|++
T Consensus 166 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 245 (474)
T 1zmd_A 166 VSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTG 245 (474)
T ss_dssp ECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred EcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEE
Confidence 88888888877899999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred EEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCC
Q 010573 281 VDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359 (507)
Q Consensus 281 i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~ 359 (507)
++.++++ +.+++.+...++++++++|.|++|+|++|+++++.++.+|++++++|+|.||+++||+.|+|||+|||++.+
T Consensus 246 i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~ 325 (474)
T 1zmd_A 246 ATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGP 325 (474)
T ss_dssp EEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGSSSC
T ss_pred EEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCCEEEeeecCCCC
Confidence 9877665 777664333346678999999999999999987666788999988899999999999999999999999989
Q ss_pred CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEE
Q 010573 360 MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (507)
Q Consensus 360 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (507)
.+++.|..||+.||.||++...+++|..+|+++|++|+++++|+++++++..|+++.+..+++....++.+.+++.+|+|
T Consensus 326 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k 405 (474)
T 1zmd_A 326 MLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVK 405 (474)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEE
T ss_pred ccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEE
Confidence 99999999999999999987666788899999999999999999999999999999999999999999888888889999
Q ss_pred EEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh-ccCCCC
Q 010573 440 ILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT-HDKPIH 506 (507)
Q Consensus 440 ~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~-~~~~~~ 506 (507)
+++++++++|+|+|++|+++.|+|+.++.+|++++|+++|.+++++|||++|++.++++.+ .+++.|
T Consensus 406 ~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~ 473 (474)
T 1zmd_A 406 ILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSIN 473 (474)
T ss_dssp EEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHHHHHHSCCSC
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHHHhcCCcCC
Confidence 9999889999999999999999999999999999999999999999999999999999887 666655
No 6
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=3e-73 Score=584.46 Aligned_cols=465 Identities=57% Similarity=0.939 Sum_probs=417.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCccc-CccccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVD 120 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 120 (507)
.+|||+||||||||+++|..|++.|++|+|||+++.+||+|.+.+|+|++.+......+..+...+..+|+.. ....++
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 3589999999999999999999999999999998899999999999999999888877777765566677765 455678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEE------EEeCeEEEccCCCCCCCCCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTV------VKGKNIIIATGSDVKSLPGI 194 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~------~~~d~lvlAtG~~p~~~pg~ 194 (507)
+..+..+.......+...+...+++.+++++.+...+.+.+.+.+.+.+|+... +.||+||+|||++|+.+|+.
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~ 163 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGI 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCC
Confidence 899888888888888888888888899999999988888888888876663234 99999999999999878887
Q ss_pred ccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 010573 195 TIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
...+..++++.++..+...+++++|||+|++|+|+|..|++.|.+||++++.+++++.+|+++.+.+.+.+++.||++++
T Consensus 164 ~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 243 (478)
T 1v59_A 164 EIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKL 243 (478)
T ss_dssp CCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 65445688889988887789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEE--cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEe
Q 010573 275 KTKVVGVDL--SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (507)
Q Consensus 275 ~~~v~~i~~--~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 352 (507)
+++|++++. +++.+.+++.+..+++++++++|.|++|+|++|+++.+.++..|++++++|+|.||+++||+.|+|||+
T Consensus 244 ~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~ 323 (478)
T 1v59_A 244 STKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVV 323 (478)
T ss_dssp SEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEEC
T ss_pred CCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEe
Confidence 999999987 566677776543345567899999999999999998544788899999889999999999999999999
Q ss_pred cCCCCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcC
Q 010573 353 GDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAID 432 (507)
Q Consensus 353 GD~a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (507)
|||++.+.+++.|..||+.||.||++...+++|..+|+++|++|+++++|+++++++..|+++.+..+++....++.+.+
T Consensus 324 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 403 (478)
T 1v59_A 324 GDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQ 403 (478)
T ss_dssp GGGSSSCCCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTT
T ss_pred eccCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCEEEEEEecccchhhhhcC
Confidence 99999899999999999999999998766678899999999999999999999999999999999999999888888777
Q ss_pred CcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 433 DAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 433 ~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
++.+++|+++++++++|+|+|++|+++.++|+.++.+|++++|+++|.+++++|||++|++.+++..+.+++.|
T Consensus 404 ~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 477 (478)
T 1v59_A 404 DTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMAAYDKAIH 477 (478)
T ss_dssp CCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHHHHHHHHSCCSC
T ss_pred CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHHHHHHHhcCcCC
Confidence 78899999999889999999999999999999999999999999999999999999999999999888777665
No 7
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=2.5e-73 Score=584.74 Aligned_cols=463 Identities=42% Similarity=0.657 Sum_probs=410.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+|||+|||||+||+++|..|++.|++|+|||+++.+||+|.+.+|+|++.++.....+..+. .+..+|+.......+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~-~~~~~gi~~~~~~~~ 82 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVR-HLAANGIKYPEPELD 82 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTCCCCCCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHH-HHHhCCcccCCCccC
Confidence 3458999999999999999999999999999999889999999999999998887776666553 355677776666788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCC----------ceEEEEeCeEEEccCCCCCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG----------GNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g----------~~~~~~~d~lvlAtG~~p~~ 190 (507)
+..+..+.......+...+..++++.+++++.+.+..++.+.+.+.+.+| +..++.||+||+|||++|..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 83 IDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 99999888888888888888888889999999988888888888765433 22579999999999999865
Q ss_pred CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCc
Q 010573 191 LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 191 ~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv 270 (507)
+|+.+.+. .++++.++..+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+.+.+++.||
T Consensus 163 ~~~i~~~~-~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV 241 (482)
T 1ojt_A 163 LPFIPEDP-RIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFD 241 (482)
T ss_dssp CSSCCCCT-TEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEE
T ss_pred CCCCCccC-cEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCC
Confidence 55433222 57888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
+++++++|++++.+++++.+++.+. ++.++++++|.|++|+|++|+++++.++.+|++++++|+|.||+++||+.|+||
T Consensus 242 ~i~~~~~v~~i~~~~~~~~v~~~~~-~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iy 320 (482)
T 1ojt_A 242 NIMVNTKTVAVEPKEDGVYVTFEGA-NAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIY 320 (482)
T ss_dssp EEECSCEEEEEEEETTEEEEEEESS-SCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEE
T ss_pred EEEECCEEEEEEEcCCeEEEEEecc-CCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEE
Confidence 9999999999988777777777521 111457899999999999999987667888999998899999999999999999
Q ss_pred EecCCCCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhh
Q 010573 351 AIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKA 430 (507)
Q Consensus 351 A~GD~a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (507)
|+|||++.+.+++.|.+||++||.||++...++++..+|+++|++|+++++|+||++|+..|+++.++.+++....++.+
T Consensus 321 A~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~ 400 (482)
T 1ojt_A 321 AIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAIA 400 (482)
T ss_dssp ECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHH
T ss_pred EEEcccCCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhh
Confidence 99999998999999999999999999987766788889999999999999999999999999999999999998889888
Q ss_pred cCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 431 IDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 431 ~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
.+++.+|+|+++|+++++|+|+|++|+++.|+|+.++.||++++|++||.+++++|||++|.+.++++.+..++.|
T Consensus 401 ~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~~~~~~~~ 476 (482)
T 1ojt_A 401 NGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAEVALGTCTD 476 (482)
T ss_dssp TTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTTHHHHHHHHHHTCCTT
T ss_pred cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHHhccccc
Confidence 8888899999999889999999999999999999999999999999999999999999999999999887765544
No 8
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.1e-73 Score=582.48 Aligned_cols=466 Identities=89% Similarity=1.320 Sum_probs=414.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+.+|||+|||||+||+++|.+|++.|++|+|||+++.+||+|.+.+|+|++.+......+..+...+..+|+.......+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 34689999999999999999999999999999998899999999999999988877776666554355567765555678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCce
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKR 200 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~ 200 (507)
+..+..+.......+...+..++++.+++++.+.+..++.+.+.+.+.+|+...+.||+||+|||++|..++....+...
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~ 163 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKK 163 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCccc
Confidence 99998888888888877778888888999999988888888888877666446899999999999988644433323345
Q ss_pred EecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 201 IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 201 ~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
+++..++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||++++++++++
T Consensus 164 v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 243 (470)
T 1dxl_A 164 IVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVG 243 (470)
T ss_dssp EECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEE
T ss_pred EEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 78888888887789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~ 360 (507)
++.+++++.+++.+..+++++++++|.|++|+|++|+++++.++.+|++++++|+|.||+++||+.|+|||+|||++.+.
T Consensus 244 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~ 323 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPM 323 (470)
T ss_dssp EECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTSSSCC
T ss_pred EEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccCCCCc
Confidence 98766667777653223445789999999999999999987678889999888999999999999999999999999889
Q ss_pred cHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEE
Q 010573 361 LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 440 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 440 (507)
+++.|.+||+.||.||++...+++|..+|+++|++|+++++|+++++++..|+++.+..+++....++.+.+++.+|+|+
T Consensus 324 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 403 (470)
T 1dxl_A 324 LAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKI 403 (470)
T ss_dssp CHHHHHHHHHHHHHHHTTSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEE
T ss_pred cHHHHHHHHHHHHHHHcCCCcCCCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEEEecccchHHHhcCCCcEEEEE
Confidence 99999999999999999877667888999999999999999999999999999999999999988888888888899999
Q ss_pred EEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 441 LAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 441 ~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
++++++++|+|+|++|+++.|+|+.++.+|++++|+++|.+++++|||++|++.++++.+..++.|
T Consensus 404 ~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 469 (470)
T 1dxl_A 404 IAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIH 469 (470)
T ss_dssp EEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHHHHSCCSC
T ss_pred EEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHHHhcCccc
Confidence 999889999999999999999999999999999999999999999999999999999888877665
No 9
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=4.5e-72 Score=572.33 Aligned_cols=454 Identities=48% Similarity=0.777 Sum_probs=402.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+|||||+||++||.+|++.|++|+|||+++ +||+|.+.+|+|++.+......+..+. ....+|+. .....++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~-~~~~~g~~-~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLK-VAEGFGLK-AKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHH-HHGGGTEE-CCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHH-hHHhcCCC-CCCCcCHH
Confidence 5899999999999999999999999999999966 999999999999998887776666554 34556765 45678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEe
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~ 202 (507)
.+..+.....+.+...+..++++.+++++.+++.+++.+.+.+. | .++.||+||||||++|..+|+++.+. .++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~---g--~~~~~d~lViATGs~p~~p~gi~~~~-~v~ 156 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG---G--ERYGAKSLILATGSEPLELKGFPFGE-DVW 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET---T--EEEEEEEEEECCCEEECCBTTBCCSS-SEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc---c--EEEEeCEEEEcCCCCCCCCCCCCCCC-cEE
Confidence 99998888888888778888888999999998888887766553 4 68999999999999987655444322 577
Q ss_pred cchhhccccC-CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 203 SSTGALALNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 203 ~~~~~~~~~~-~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
++.++..+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++++++
T Consensus 157 ~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i 236 (464)
T 2eq6_A 157 DSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGY 236 (464)
T ss_dssp CHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEE
T ss_pred cHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEE
Confidence 8888888877 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCc
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPML 361 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~ 361 (507)
+.+++++.+++.+..+|+..++++|.|++|+|++|++.++.++..|++++++|+|.||+++||+.|+|||+|||++.+.+
T Consensus 237 ~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~l 316 (464)
T 2eq6_A 237 EKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLL 316 (464)
T ss_dssp EEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSSCC
T ss_pred EEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEeccCCCccc
Confidence 88777777776521113334899999999999999998765678889998889999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEE
Q 010573 362 AHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKIL 441 (507)
Q Consensus 362 ~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 441 (507)
++.|..||+.||.||++...++++. +|+++|++|+++++|+++++++..|+++.++.+++....++...+++.+|+|++
T Consensus 317 ~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~ 395 (464)
T 2eq6_A 317 AHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVV 395 (464)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCC-CCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCC-CCeEEECCCCEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEEE
Confidence 9999999999999999876667788 999999999999999999999999999999999999888888887888999999
Q ss_pred EECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 442 AEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 442 ~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
+++++++|+|+|++|+++.|+|+.++.||++++|+++|.+++++|||++|.+.++++.+..++.|
T Consensus 396 ~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 460 (464)
T 2eq6_A 396 GDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIH 460 (464)
T ss_dssp EETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHHHHTTCCSS
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHHhcCccc
Confidence 99889999999999999999999999999999999999999999999999999999887766554
No 10
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=3.4e-72 Score=574.20 Aligned_cols=459 Identities=38% Similarity=0.613 Sum_probs=406.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+||||||||+++|..|++.|++|+|||++ .+||.|.+.+|+|++.++.....+..+...+..+++. .....++.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 80 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GEVTFDYG 80 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-ECCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CCCccCHH
Confidence 479999999999999999999999999999996 8999999999999998888777766665445556665 44567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEe
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~ 202 (507)
.+..+.......+...+.+.+++.+++++.+....++.+.+.+.+.+|+..++.||+||+|||++|..++....+.. ++
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~-~~ 159 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSAN-VV 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTT-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCce-EE
Confidence 88888877777777777888888999999998877888888888776644689999999999998854433222223 78
Q ss_pred cchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 203 SSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 203 ~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
+..+...+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+|+++.+.+.+.+++.||++++++++++++
T Consensus 160 ~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 160 TYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEE
T ss_pred ecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEE
Confidence 88888888778999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcH
Q 010573 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLA 362 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~ 362 (507)
.+++++.+++. .+++.+++++|.|++|+|++|+++++.++.+|++++++|+|.||+++||+.|+|||+|||++.+.++
T Consensus 240 ~~~~~~~v~~~--~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~ 317 (464)
T 2a8x_A 240 DGGSQVTVTVT--KDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLA 317 (464)
T ss_dssp ECSSCEEEEEE--SSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGGCSSCSH
T ss_pred EcCCeEEEEEE--cCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeECcCCCccCH
Confidence 77666777664 1234478999999999999999988666788999988899999999999999999999999989999
Q ss_pred hHHHHHHHHHHHHHcC-CCCC-CCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEE
Q 010573 363 HKAEEDGVACVEFLAG-KHGH-VDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 440 (507)
Q Consensus 363 ~~A~~~g~~aa~~i~~-~~~~-~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 440 (507)
+.|.+||+.||.||++ ...+ ++|..+|+++|++|+++++|+++++++..|+++.+..+++....++.+.+++.+|+|+
T Consensus 318 ~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 397 (464)
T 2a8x_A 318 HVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKL 397 (464)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhhcCCCcEEEEE
Confidence 9999999999999998 5555 6678899999999999999999999999999999999999998898888888899999
Q ss_pred EEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 441 LAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 441 ~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
++|+++++|+|+|++|+++.|+|+.++.+|++++|+++|.+++++|||++|++.++++.+..++.|
T Consensus 398 ~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 463 (464)
T 2a8x_A 398 VADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFHGLVGHMIN 463 (464)
T ss_dssp EEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHHHHHSCCSC
T ss_pred EEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHHHHhccccc
Confidence 999889999999999999999999999999999999999999999999999999999888777665
No 11
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.8e-72 Score=569.71 Aligned_cols=452 Identities=44% Similarity=0.728 Sum_probs=403.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.+......+..+. .+..+|+.......++.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAK-HSEEMGIKAENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHH-TCGGGTEECCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHH-HHHhcCcccCCCccCHH
Confidence 479999999999999999999999999999996 8999999999999998887776666554 34556776655678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEe
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~ 202 (507)
.+..+.......+...+...+++.+++++.+++.+++++.+.+.+.+| ...+.||+||+|||++|..++....+.. ++
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G-~~~i~~d~lViATGs~p~~~~~~g~~~~-v~ 158 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDS-AQTYTFKNAIIATGSRPIELPNFKFSNR-IL 158 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTE-EEEEECSEEEECCCEEECCBTTBCCCSS-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCC-cEEEEeCEEEEecCCCCCCCCCCCccce-Ee
Confidence 998888888888888888888899999999998888888888877655 2579999999999998854433222222 78
Q ss_pred cchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 203 SSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 203 ~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
+..+...+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++
T Consensus 159 ~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 238 (455)
T 1ebd_A 159 DSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAE 238 (455)
T ss_dssp CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred cHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 88888887778999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcH
Q 010573 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLA 362 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~ 362 (507)
.+++++.+++.. +++++++++|.|++|+|++|+++++.++..|++++++|+|.||+++||+.|+|||+|||++.+.++
T Consensus 239 ~~~~~~~v~~~~--~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~ 316 (455)
T 1ebd_A 239 EREDGVTVTYEA--NGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALA 316 (455)
T ss_dssp EETTEEEEEEEE--TTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSCCCH
T ss_pred EeCCeEEEEEEe--CCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccCCCcccH
Confidence 877777777642 345678999999999999999988666788999988899999999999999999999999988999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEEE
Q 010573 363 HKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILA 442 (507)
Q Consensus 363 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 442 (507)
+.|..||+.||.||++...+++|..+|+++|++|+++++|+++++++..|+++.+..+++....++.+.+++.+|+|+++
T Consensus 317 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 396 (455)
T 1ebd_A 317 HKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVV 396 (455)
T ss_dssp HHHHHHHHHHHHHHTSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEE
Confidence 99999999999999987666788899999999999999999999999999999999999999899888888889999999
Q ss_pred ECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh
Q 010573 443 EKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 443 ~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 500 (507)
++++++|+|+|++|+++.|+|+.++.||++++|++||.+++++|||++|++.++++.+
T Consensus 397 ~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 454 (455)
T 1ebd_A 397 RKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVA 454 (455)
T ss_dssp ETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHHHHT
T ss_pred ECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHh
Confidence 9889999999999999999999999999999999999999999999999999998765
No 12
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=7e-72 Score=574.35 Aligned_cols=454 Identities=25% Similarity=0.392 Sum_probs=400.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+||||||||++||.+|++.|++|+|||++ .+||+|.+.||+|++.+......+..... +..+|+......+++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVGCMPSKLLIAAADASYHASQ-TDLFGIQVDRISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHSHHHHHHHHHHHHHHHHHTC-GGGGTEECSEEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccChhcCHHHHHHHHHHHHHhh-hhhcCcCCCCCccCHH
Confidence 489999999999999999999999999999995 69999999999999999888877665544 4566776555678898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceE
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI 201 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~ 201 (507)
.+..+.......+...+...+... +++++.+.+.+.+.+.+.+ .++ ..+.||+||||||++|..++........+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~--~~~--~~~~~d~lViATGs~p~~p~~~~~~~~~v 161 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQV--DDH--SQVIAKRIVIATGSRPNYPEFLAAAGSRL 161 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEE--TTT--EEEEEEEEEECCCEECCCCHHHHTTGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEE--cCC--cEEEeCEEEEccCCCCcCCCCCCccCCcE
Confidence 888887777766655554444443 6788999999988887665 355 78999999999999987554333335678
Q ss_pred ecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 202 VSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 202 ~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+++.+++.+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+|+++.+.+.+.+++. |++++++.++++
T Consensus 162 ~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i 240 (492)
T 3ic9_A 162 LTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVIST 240 (492)
T ss_dssp ECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEE
T ss_pred EcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEE
Confidence 8999999888889999999999999999999999999999999999999999999999999999988 999999999999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecC-CCCCCCCCCeEEecCCCCCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVN-ERFATNIPGVYAIGDVIPGPM 360 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~a~~~~ 360 (507)
+.+++++.+++.+ .+|+.+++++|.|++|+|++|+++++.++.+|++++++|+|.|| +++||+.|+|||+|||++.++
T Consensus 241 ~~~~~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~ 319 (492)
T 3ic9_A 241 IEKEDAVEVIYFD-KSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLT 319 (492)
T ss_dssp EECSSSEEEEEEC-TTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSC
T ss_pred EEcCCEEEEEEEe-CCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCc
Confidence 9888788777642 23333789999999999999999988788999999999999999 999999999999999999999
Q ss_pred cHhHHHHHHHHHHHHHcCC--CCCCCCCCccEEEEcCCCeeeecCCHHHHHHcC-----CCEEEEEEecCcccchhhcCC
Q 010573 361 LAHKAEEDGVACVEFLAGK--HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELG-----VEYRVGKFPFLANSRAKAIDD 433 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~--~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 433 (507)
+++.|..||+.||.||++. ....++..+|+++|++|+++++|+||++|++.+ .++.+.++++....++.+.++
T Consensus 320 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~ 399 (492)
T 3ic9_A 320 LLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGK 399 (492)
T ss_dssp SHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhhcCC
Confidence 9999999999999999973 234578889999999999999999999999883 789999999999999998888
Q ss_pred cceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCC
Q 010573 434 AEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKP 504 (507)
Q Consensus 434 ~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~ 504 (507)
+.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.+..+.
T Consensus 400 ~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~~~~ 470 (492)
T 3ic9_A 400 NKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALRDAQQKL 470 (492)
T ss_dssp CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHHHHHHTS
T ss_pred CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999998877654
No 13
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.1e-71 Score=567.99 Aligned_cols=444 Identities=27% Similarity=0.478 Sum_probs=395.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
.|||+||||||||++||..|++.|++|+||||++.+||+|.+.+|+|++.+......+....+.. . ....+++.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~-~-----~~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIA-N-----VKIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHH-C-----SCCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcc-c-----CCCCcCHH
Confidence 58999999999999999999999999999998899999999999999999888877776654432 2 23467899
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccCC
Q 010573 123 AMMAQKDKAVSNLT--RGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITIDE 198 (507)
Q Consensus 123 ~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~ 198 (507)
.+..+...... +. ..+..++++.+++++.+.+.+++++.+.|.+.+|+..++.||+||||||++|.. +||..
T Consensus 78 ~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~--- 153 (466)
T 3l8k_A 78 TVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVE--- 153 (466)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGG---
T ss_pred HHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCcc---
Confidence 99988888877 77 777788888999999999999999999998888744449999999999998854 44433
Q ss_pred ceEecchhhc----cccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCC-CHHHHHHHHHHHHhcCcEEE
Q 010573 199 KRIVSSTGAL----ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSM-DGEIRKQFQRSLEKQKMKFM 273 (507)
Q Consensus 199 ~~~~~~~~~~----~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-d~~~~~~~~~~l~~~Gv~i~ 273 (507)
.+++..++. .+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+ ++++.+.+.+.++ |+++
T Consensus 154 -~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~ 229 (466)
T 3l8k_A 154 -YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIK 229 (466)
T ss_dssp -GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEE
T ss_pred -ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEE
Confidence 477888887 566678999999999999999999999999999999999999988 9999999988886 9999
Q ss_pred cCceEEEEEEcC-CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEe
Q 010573 274 LKTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (507)
Q Consensus 274 ~~~~v~~i~~~~-~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 352 (507)
+++++++++.++ +++.+.+.+ .+|+..++++|.|++|+|++|++. +.++..|++++++| |.||+++||++|+|||+
T Consensus 230 ~~~~v~~i~~~~~~~v~v~~~~-~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~ 306 (466)
T 3l8k_A 230 FNSPVTEVKKIKDDEYEVIYST-KDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMKTNIPNVFAT 306 (466)
T ss_dssp CSCCEEEEEEEETTEEEEEECC-TTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCBCSSTTEEEC
T ss_pred ECCEEEEEEEcCCCcEEEEEEe-cCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCccCCCCCEEEE
Confidence 999999998776 777777642 133445899999999999999998 65788999999989 99999999999999999
Q ss_pred cCCCCCCCcHhHHHHHHHHHHHHHcCC---CCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchh
Q 010573 353 GDVIPGPMLAHKAEEDGVACVEFLAGK---HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAK 429 (507)
Q Consensus 353 GD~a~~~~~~~~A~~~g~~aa~~i~~~---~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (507)
|||++.+++++.|..||+.||.||++. ....++..+|+++|++|+++++|+||++|+..|+++++..+++....++.
T Consensus 307 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~ 386 (466)
T 3l8k_A 307 GDANGLAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIEIVEAEYNMEEDVSAQ 386 (466)
T ss_dssp GGGTCSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEEGGGSHHHH
T ss_pred EecCCCCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCCCEEEEEEEcccChhhe
Confidence 999998999999999999999999975 34567889999999999999999999999999999999999999999988
Q ss_pred hcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccC
Q 010573 430 AIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDK 503 (507)
Q Consensus 430 ~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~ 503 (507)
..++++||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.+...
T Consensus 387 ~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~ 460 (466)
T 3l8k_A 387 IYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIISYTARKVIEG 460 (466)
T ss_dssp HHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHHHHHHHC-
T ss_pred ecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHHHHHHHhh
Confidence 88888999999999999999999999999999999999999999999999999999999999999999887553
No 14
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.7e-71 Score=567.26 Aligned_cols=447 Identities=28% Similarity=0.474 Sum_probs=394.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
++.+|||+||||||||++||..|++.|++|+|||+ +.+||+|.+.+|+|++.+......+... .....+++......+
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~-~~~GG~~~~~gc~p~k~l~~~~~~~~~~-~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVES-HKLGGTCVNVGCVPKKVMWNTAVHSEFM-HDHADYGFPSCEGKF 94 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHH-TTTTTTTSCCCCCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCcccccCccchHHHHHHHHHHHHH-HHHHhcCccCCCCcc
Confidence 34468999999999999999999999999999997 5899999999999999988877766544 344667776666788
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCC-----CCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSL-----PGI 194 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~-----pg~ 194 (507)
++..+..+.......+...+...++..+++++.+.+.+++.....+. .++ .++.||+||||||++|..+ ||.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g--~~~~~d~lviAtG~~p~~p~~~~i~G~ 171 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSG--KKYTAPHILIATGGMPSTPHESQIPGA 171 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETT--EEEECSCEEECCCEEECCCCTTTSTTG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECC--EEEEeeEEEEccCCCCCCCCcCCCCCC
Confidence 99999999999999888888888899999999999999888776666 345 6799999999999987543 443
Q ss_pred ccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 010573 195 TIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
. .++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+.+.+++.||++++
T Consensus 172 ~----~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~ 247 (478)
T 3dk9_A 172 S----LGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLK 247 (478)
T ss_dssp G----GSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEET
T ss_pred c----eeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 2 456778888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCe--EEEEEeecCCCc--eEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 275 KTKVVGVDLSGDG--VKLTLEPAAGGE--KTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 275 ~~~v~~i~~~~~~--v~v~~~~~~~g~--~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
++.+++++.++++ +.+.+.+...++ ++++++|.|++|+|++|++..+.++..|++++++|+|.||+++||++||||
T Consensus 248 ~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iy 327 (478)
T 3dk9_A 248 FSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIY 327 (478)
T ss_dssp TEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEE
T ss_pred CCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEE
Confidence 9999999876555 556654322222 378999999999999999987777889999999999999999999999999
Q ss_pred EecCCCCCCCcHhHHHHHHHHHHHHHcCC--CCCCCCCCccEEEEcCCCeeeecCCHHHHHHcC--CCEEEEEEecCccc
Q 010573 351 AIGDVIPGPMLAHKAEEDGVACVEFLAGK--HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELG--VEYRVGKFPFLANS 426 (507)
Q Consensus 351 A~GD~a~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~~~~~~~~~ 426 (507)
|+|||++.|.+++.|..||+.||+||++. ....+|..+|+++|++|+++++|+||++|++.+ .++.+.+.++....
T Consensus 328 A~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~ 407 (478)
T 3dk9_A 328 AVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMY 407 (478)
T ss_dssp ECGGGGCSSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGG
T ss_pred EEEecCCCCccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEEeecCcch
Confidence 99999999999999999999999999987 345688899999999999999999999999875 46777777888888
Q ss_pred chhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHH
Q 010573 427 RAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 495 (507)
Q Consensus 427 ~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~ 495 (507)
++...+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|+|..
T Consensus 408 ~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 476 (478)
T 3dk9_A 408 HAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVT 476 (478)
T ss_dssp GGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGS
T ss_pred hhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHh
Confidence 888777889999999999999999999999999999999999999999999999999999999998753
No 15
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.1e-70 Score=567.42 Aligned_cols=453 Identities=26% Similarity=0.449 Sum_probs=400.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcc--cCcc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK--FSSV 117 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~--~~~~ 117 (507)
+|||+|||||+||++||.+|++. |++|+|||+++ +||+|.+.+|+|++.+......+..+. .+..+|+. ....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~-~~~~~g~~~~~~~~ 79 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELR-RAPHLGFHIDFDDA 79 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHT-TTTTTTBC------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHH-HHHhCCCccccCCC
Confidence 37999999999999999999999 99999999977 999999999999998887776665443 34556665 3445
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecC------CEEEEEccCCceEEEEeCeEEEccCCCCCCC
Q 010573 118 EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP------SEVSVDTIEGGNTVVKGKNIIIATGSDVKSL 191 (507)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~------~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 191 (507)
..++..+..+.+.....+...+.+++++.+++++.+.+.+++. +.+.+.+.+|+...+.||+||+|||++|..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 80 KISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 6789999999888888888888888899999999999888887 6677777666334799999999999988544
Q ss_pred CCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcE
Q 010573 192 PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 192 pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
+....+...+++..+...+...+++++|||+|++|+|+|..+.+.|.+|+++++.+++++.+|+++.+.+.+.+++.||+
T Consensus 160 ~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 239 (499)
T 1xdi_A 160 PSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVR 239 (499)
T ss_dssp GGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCE
T ss_pred CCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCE
Confidence 32222334578888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
++++++|++++.+++++.+++. +++++++|.||+|+|++|+++++.++.+|++++++|+|.||+++||+.|+|||
T Consensus 240 i~~~~~V~~i~~~~~~v~v~~~-----~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 314 (499)
T 1xdi_A 240 LFKNARAASVTRTGAGVLVTMT-----DGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYA 314 (499)
T ss_dssp EETTCCEEEEEECSSSEEEEET-----TSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTTEEE
T ss_pred EEeCCEEEEEEEeCCEEEEEEC-----CCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCCCEEE
Confidence 9999999999887666666643 45689999999999999999887678889999988999999999999999999
Q ss_pred ecCCCCCCCcHhHHHHHHHHHHHHHcCC-CCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhh
Q 010573 352 IGDVIPGPMLAHKAEEDGVACVEFLAGK-HGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKA 430 (507)
Q Consensus 352 ~GD~a~~~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (507)
+|||++.+.+++.|..||++||.||++. ...++|..+|+++|++|+++++|+++++++..|+++.+..+++....++.+
T Consensus 315 ~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~ 394 (499)
T 1xdi_A 315 AGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNARAKM 394 (499)
T ss_dssp CSGGGTSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSSCEEEEEEESTTSHHHHH
T ss_pred EeccCCCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCCCEEEEEEecCcccceee
Confidence 9999999999999999999999999987 455678889999999999999999999999999999999999999999888
Q ss_pred cCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhcc
Q 010573 431 IDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHD 502 (507)
Q Consensus 431 ~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~ 502 (507)
.+++.+|+|+++++++++|+|++++|+++.|+|+.++.||++++|+++|.+++++|||++|++.++++.+..
T Consensus 395 ~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~ 466 (499)
T 1xdi_A 395 SEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAARRLMA 466 (499)
T ss_dssp TTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHHHHCC
T ss_pred cCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHHHHhc
Confidence 888889999999988999999999999999999999999999999999999999999999999999887654
No 16
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.7e-71 Score=564.67 Aligned_cols=440 Identities=27% Similarity=0.451 Sum_probs=396.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+|||||++|++||.+|++.|++|+|||+ +.+||+|.+.+|+|++.+........... .+..+++......+++.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFE-DAAGFGWTVGESRFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTEEECCCEECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHH-HHHhcCcccCCCCcCHH
Confidence 58999999999999999999999999999999 88999999999999999888777766554 35667777666788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC-C--CCCCccCCc
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK-S--LPGITIDEK 199 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~-~--~pg~~~~~~ 199 (507)
.+..+.......+...+..++++.+++++.+.+.+++...+.+. .++ ..+.||++|+|||++|. . +||..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~-~~~--~~~~~d~lviAtG~~p~~~p~i~G~~---- 155 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLL-ASG--KTVTAERIVIAVGGHPSPHDALPGHE---- 155 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEET-TTT--EEEEEEEEEECCCEEECCCTTSTTGG----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEe-cCC--eEEEeCEEEEecCCCcccCCCCCCcc----
Confidence 99999998888888888888888999999999999888766553 344 78999999999999876 3 33322
Q ss_pred eEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 200 RIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 200 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
.++++.+++.+...+++++|||+|++|+|+|..+.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 235 (463)
T 4dna_A 156 LCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQ 235 (463)
T ss_dssp GCBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred ccccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEE
Confidence 46778888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCe-EEEE-EeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 280 GVDLSGDG-VKLT-LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 280 ~i~~~~~~-v~v~-~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
+++.++++ +.++ +. +++ +++|.|++|+|++|++.++.++..|++++++|+|.||+++||++|+|||+|||++
T Consensus 236 ~i~~~~~~~~~v~~~~-----~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~ 309 (463)
T 4dna_A 236 SVSADADGRRVATTMK-----HGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTD 309 (463)
T ss_dssp EEEECTTSCEEEEESS-----SCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGS
T ss_pred EEEEcCCCEEEEEEcC-----CCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCC
Confidence 99887555 4555 43 445 9999999999999999987778899999999999999999999999999999999
Q ss_pred CCCcHhHHHHHHHHHHHHHcCCCC-CCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcce
Q 010573 358 GPMLAHKAEEDGVACVEFLAGKHG-HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEG 436 (507)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (507)
.+.+++.|..||+.||+||++... ..++..+|+++|++|+++++|+||++|++.|.++.+.++++....++...+++.+
T Consensus 310 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (463)
T 4dna_A 310 RVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKT 389 (463)
T ss_dssp SCCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCCCE
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCCCeEEEEEeccccchhhcCCCceE
Confidence 999999999999999999998643 3578899999999999999999999999999999999999999999888888899
Q ss_pred EEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 437 IVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 437 ~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+++
T Consensus 390 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 450 (463)
T 4dna_A 390 IMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMY 450 (463)
T ss_dssp EEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCCC
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999998765
No 17
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.6e-70 Score=564.70 Aligned_cols=451 Identities=29% Similarity=0.425 Sum_probs=390.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEec--------CCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK--------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK 113 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~--------~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~ 113 (507)
.+|||+||||||||++||.+|++.|++|+|||+ ...+||+|.+.+|+|++.+......+... .....+|+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~-~~~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMI-RDAHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHH-HHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHH-HHHHhcCcc
Confidence 458999999999999999999999999999997 46799999999999999887777665544 345677776
Q ss_pred cC-ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--
Q 010573 114 FS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS-- 190 (507)
Q Consensus 114 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~-- 190 (507)
.. ...++|..+..+.+..+..+...+...+++.+++++.+.+.+++++.+.+.+.+|+...+.||+||||||++|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~ 163 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPT 163 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCC
Confidence 65 467899999999999998888888888889999999999999999999998887766789999999999998854
Q ss_pred -CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcC
Q 010573 191 -LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQK 269 (507)
Q Consensus 191 -~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~G 269 (507)
+||.. ...+++.+++.+...+++++|||+|++|+|+|..|.++|.+|+++++. .+++.+|+++.+.+.+.+++.|
T Consensus 164 ~i~G~~---~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~g 239 (488)
T 3dgz_A 164 QVKGAL---EYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHG 239 (488)
T ss_dssp SCBTHH---HHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTT
T ss_pred CCCCcc---cccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccccCCHHHHHHHHHHHHHCC
Confidence 44432 235678888888888999999999999999999999999999999986 4788999999999999999999
Q ss_pred cEEEcCceEEEEEEc-CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceec-CCCCeecCCCCCCCCC
Q 010573 270 MKFMLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD-KMGRIPVNERFATNIP 347 (507)
Q Consensus 270 v~i~~~~~v~~i~~~-~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~-~~G~i~Vd~~~~t~~~ 347 (507)
|++++++.+++++.. ++.+.+++.+..+++..++++|.|++|+|++|+++++.++..|++++ ++|+|.||+++||++|
T Consensus 240 v~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~ 319 (488)
T 3dgz_A 240 TQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVP 319 (488)
T ss_dssp CEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSST
T ss_pred CEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCC
Confidence 999999999999874 44567777653334444689999999999999999877788999998 7899999999999999
Q ss_pred CeEEecCCC-CCCCcHhHHHHHHHHHHHHHcCCCC-CCCCCCccEEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecC
Q 010573 348 GVYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKHG-HVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFL 423 (507)
Q Consensus 348 ~IyA~GD~a-~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~-~~~~~~~~~~~ 423 (507)
||||+|||+ +.+.+++.|..||++||.||++... ..++..+|+++|++|+++++|+||++|++. + ..+.+...++.
T Consensus 320 ~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~ 399 (488)
T 3dgz_A 320 HIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYK 399 (488)
T ss_dssp TEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECC
T ss_pred CEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEEcccc
Confidence 999999998 6788999999999999999998653 357888999999999999999999999875 3 35777666665
Q ss_pred cccchhhc-CCcceEEEEEEE-CCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 424 ANSRAKAI-DDAEGIVKILAE-KETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 424 ~~~~~~~~-~~~~~~~k~~~~-~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
...++... +++++|+|+++| +++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++..++
T Consensus 400 ~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (488)
T 3dgz_A 400 PLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLH 475 (488)
T ss_dssp CHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHTCC
T ss_pred chhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHH
Confidence 54443332 236899999999 589999999999999999999999999999999999999999999999998764
No 18
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.2e-69 Score=555.76 Aligned_cols=449 Identities=32% Similarity=0.497 Sum_probs=393.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhC-CcccCcccc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH-GVKFSSVEV 119 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 119 (507)
+.++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|++.++.....+..... .... |+.......
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~-~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRE-SPFDGGIAATVPTI 79 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHC-CTTTTTSCCCCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhh-hhhcCCccCCCCcc
Confidence 45689999999999999999999999999999996 89999999999999988777665544332 2223 454444567
Q ss_pred ChHHHHHHHHHHHHHHHH-HHHHHHHhC-CcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCc
Q 010573 120 DLPAMMAQKDKAVSNLTR-GIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~ 195 (507)
++..+..+.......+.. .+.+++++. +++++.+.+.+++.+.+.+.+.+|+...+.||+||||||++|.. +||..
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~ 159 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK 159 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCC
Confidence 788888777766665543 345667777 99999999989999999998877755789999999999998753 44443
Q ss_pred cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcC
Q 010573 196 IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 275 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~ 275 (507)
...+++..++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ +++++.+.+.+.+++.||+++++
T Consensus 160 --~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~ 236 (467)
T 1zk7_A 160 --ESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEH 236 (467)
T ss_dssp --TSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETT
T ss_pred --cCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcC
Confidence 345678888888888899999999999999999999999999999999999999 99999999999999999999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCC
Q 010573 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDV 355 (507)
Q Consensus 276 ~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~ 355 (507)
++|++++.+++.+.+.+. +.++++|.||+|+|++|++..+.++..|++++++|+|.||+++||+.|+|||+|||
T Consensus 237 ~~v~~i~~~~~~~~v~~~------~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~ 310 (467)
T 1zk7_A 237 TQASQVAHMDGEFVLTTT------HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDC 310 (467)
T ss_dssp CCEEEEEEETTEEEEEET------TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTT
T ss_pred CEEEEEEEeCCEEEEEEC------CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEecc
Confidence 999999877766666652 35899999999999999998765678899998889999999999999999999999
Q ss_pred CCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcc
Q 010573 356 IPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAE 435 (507)
Q Consensus 356 a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (507)
++.+.+++.|..||+.||.||++.....++..+|++.|++|+++++|+++.+++..|+++.+..+++....++....++.
T Consensus 311 ~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 390 (467)
T 1zk7_A 311 TDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTR 390 (467)
T ss_dssp BSSCCCHHHHHHHHHHHHHHHTTCCCCCCCTTCEEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCC
T ss_pred CCCcccHHHHHHHHHHHHHHHcCCCcccCCCCCCEEEecCCceEEEecCHHHHHhcCCCeEEEEEecccchhhhhcCCCc
Confidence 99999999999999999999998765677888999999999999999999999999999999999998888887777788
Q ss_pred eEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHh
Q 010573 436 GIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 436 ~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 500 (507)
+|+|+++++++++|||+|++|+++.++|+.++.+|++++|+++|.+++++|||++|++.++++..
T Consensus 391 ~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~ 455 (467)
T 1zk7_A 391 GFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTF 455 (467)
T ss_dssp CEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHHTT
T ss_pred EEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHH
Confidence 99999999889999999999999999999999999999999999999999999999999998754
No 19
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.1e-70 Score=559.49 Aligned_cols=454 Identities=50% Similarity=0.845 Sum_probs=406.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+||||||||++||.+|++.|++|+|||+++.+||+|.+.+|+|++.+......+..+.. ..+|+.......++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK--GLLGAKVKGVELDLP 78 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--CCTTEEECCEEECHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh--hcCCcccCCCccCHH
Confidence 379999999999999999999999999999998899999999999999998887777666544 556776555678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEe
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~ 202 (507)
.+..+.....+.+...+..++++.+++++.+.+.+++++.+.+.+ +| ..+.||+||+|||++|..+|....+...++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~-~g--~~~~~d~lviAtG~~p~~~~~~g~~~~~v~ 155 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEE-TG--EELEARYILIATGSAPLIPPWAQVDYERVV 155 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETT-TC--CEEEEEEEEECCCEEECCCTTBCCCSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEee-CC--EEEEecEEEECCCCCCCCCCCCCCCcCcEe
Confidence 999888888888887788888888999999988888888888876 55 679999999999998865544333344578
Q ss_pred cchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 203 SSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 203 ~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
+..++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++
T Consensus 156 ~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~ 235 (455)
T 2yqu_A 156 TSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVV 235 (455)
T ss_dssp CHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred chHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 88888887778999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcH
Q 010573 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLA 362 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~ 362 (507)
.+++++.+++. +++++++|.||+|+|++|++.++.++..|++++++|+|.||+++||+.|+|||+|||++.+.++
T Consensus 236 ~~~~~v~v~~~-----~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~ 310 (455)
T 2yqu_A 236 PEAKGARVELE-----GGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGPMLA 310 (455)
T ss_dssp EETTEEEEEET-----TSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSCCCH
T ss_pred EeCCEEEEEEC-----CCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCccCH
Confidence 87777777664 4568999999999999999987666788999888899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEEE
Q 010573 363 HKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILA 442 (507)
Q Consensus 363 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 442 (507)
+.|..||+.||.||++....+++..+|++.|++|+++++|+++++++..|+++.+..+++....++...+++.+|+|+++
T Consensus 311 ~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 390 (455)
T 2yqu_A 311 HKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLA 390 (455)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEE
T ss_pred HHHHHhHHHHHHHHcCCCccCCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCCCcEEEEEEE
Confidence 99999999999999987666677788999999999999999999999999999999999988888887777889999999
Q ss_pred ECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 443 EKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 443 ~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
++++++|+|++++|+.+.|+++.++++|++++|+++|.+++++|||++|++.++++.+..++.|
T Consensus 391 ~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 454 (455)
T 2yqu_A 391 HAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAALAAWERPIH 454 (455)
T ss_dssp ETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHHHHHSCCSC
T ss_pred ECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHHhcCccc
Confidence 9889999999999999999999999999999999999999999999999999999888777665
No 20
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.9e-70 Score=565.63 Aligned_cols=455 Identities=27% Similarity=0.462 Sum_probs=390.7
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC--------CCCceeccccccchhhhhhhhHHHHHHHhhhhh
Q 010573 38 ASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG--------ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFAS 109 (507)
Q Consensus 38 ~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~--------~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 109 (507)
+++...|||+||||||||++||.+|++.|++|+|||+++ .+||+|.+.||+|++.+......+... ..+..
T Consensus 27 ~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~-~~~~~ 105 (519)
T 3qfa_A 27 LPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQAL-QDSRN 105 (519)
T ss_dssp CCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred cCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHH-HHHHh
Confidence 445567999999999999999999999999999999854 799999999999999887776655543 44567
Q ss_pred CCcccCc-cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC
Q 010573 110 HGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 110 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 188 (507)
+|+.... ..++|..+..+.+.....+...+...++..+|+++.+.+.+++++.+.+...+|+..++.||+||||||++|
T Consensus 106 ~g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 106 YGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp TTBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 7876643 578999999999999988888888888899999999999999999999988877556899999999999988
Q ss_pred CC--CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHH
Q 010573 189 KS--LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLE 266 (507)
Q Consensus 189 ~~--~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~ 266 (507)
.. +||. ...++++.+++.+...+++++|||+|++|+|+|..|.++|.+|+++++. .+++.+|+++.+.+.+.++
T Consensus 186 ~~p~i~G~---~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~ 261 (519)
T 3qfa_A 186 RYLGIPGD---KEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRGFDQDMANKIGEHME 261 (519)
T ss_dssp CCCCCTTH---HHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCc---cCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccccCCHHHHHHHHHHHH
Confidence 54 3442 2346788888888888999999999999999999999999999999984 6889999999999999999
Q ss_pred hcCcEEEcCceEEEEEEcC----CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceec-CCCCeecCCC
Q 010573 267 KQKMKFMLKTKVVGVDLSG----DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD-KMGRIPVNER 341 (507)
Q Consensus 267 ~~Gv~i~~~~~v~~i~~~~----~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~-~~G~i~Vd~~ 341 (507)
+.||++++++.+++++..+ +.+.+++....++...++++|.|++|+|++|+++.+.++..|++++ ++|+|.||++
T Consensus 262 ~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~ 341 (519)
T 3qfa_A 262 EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDE 341 (519)
T ss_dssp HTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTT
T ss_pred HCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCC
Confidence 9999999999888876532 4566665433222224689999999999999999877888999998 5799999999
Q ss_pred CCCCCCCeEEecCCC-CCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcC--CCEEE
Q 010573 342 FATNIPGVYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELG--VEYRV 417 (507)
Q Consensus 342 ~~t~~~~IyA~GD~a-~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~--~~~~~ 417 (507)
+||++|||||+|||+ +.+.+++.|..||++||+||++.. ...++..+|+++|++|+++++|+||++|++.+ ..+.+
T Consensus 342 ~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~ 421 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 421 (519)
T ss_dssp SBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEE
T ss_pred CccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEE
Confidence 999999999999999 678899999999999999999764 34678899999999999999999999998762 35666
Q ss_pred EEEecCcccchhhcC-CcceEEEEEEEC-CCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHH
Q 010573 418 GKFPFLANSRAKAID-DAEGIVKILAEK-ETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 495 (507)
Q Consensus 418 ~~~~~~~~~~~~~~~-~~~~~~k~~~~~-~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~ 495 (507)
.+.++....++.... .+++|+|+++|+ ++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++..
T Consensus 422 ~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~ 501 (519)
T 3qfa_A 422 YHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTT 501 (519)
T ss_dssp EEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGGGGGG
T ss_pred EEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHH
Confidence 666666555544433 467999999997 589999999999999999999999999999999999999999999999987
Q ss_pred HH
Q 010573 496 AA 497 (507)
Q Consensus 496 ~~ 497 (507)
++
T Consensus 502 ~~ 503 (519)
T 3qfa_A 502 LS 503 (519)
T ss_dssp CC
T ss_pred HH
Confidence 65
No 21
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.1e-70 Score=557.79 Aligned_cols=450 Identities=39% Similarity=0.657 Sum_probs=400.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhh---CCcccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFAS---HGVKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~ 119 (507)
+|||+||||||||++||.+|++.|++|+|||+ +.+||+|.+.+|+|++.++.....+..+. .+.. +|+......+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQAS-RFTEPSPLGISVASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-HTTSCCTTCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHh-hcccccccCcccCCCcc
Confidence 48999999999999999999999999999999 78999999999999999888877776665 3444 6777666778
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEK 199 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~ 199 (507)
++..+..+....++.+...+..++++.+++++.+++.+++.+.+.+. + ..+.||+||||||++|..+|+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~--~---~~~~~d~lviATGs~p~~~~~~~~~~- 156 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVD--G---QRIQCEHLLLATGSSSVELPMLPLGG- 156 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEET--T---EEEECSEEEECCCEEECCBTTBCCBT-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEe--e---EEEEeCEEEEeCCCCCCCCCCCCccC-
Confidence 99999999999998888888888999999999998888887665552 2 67999999999999986555444333
Q ss_pred eEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 200 RIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 200 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
.++++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|+
T Consensus 157 ~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~ 236 (458)
T 1lvl_A 157 PVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVE 236 (458)
T ss_dssp TEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEE
T ss_pred cEecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEE
Confidence 57888888888778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP 359 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~ 359 (507)
+++. +.+.++ . .+|+.+++++|.|++|+|++|+++++.++..|++++++ +|.||+++||+.|+|||+|||++.+
T Consensus 237 ~i~~--~~v~v~--~-~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD~~~~~ 310 (458)
T 1lvl_A 237 GYEN--GCLLAN--D-GKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGDVAGEP 310 (458)
T ss_dssp EEET--TEEEEE--C-SSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGGGGCSS
T ss_pred EEEe--CCEEEE--E-CCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeeccCCCc
Confidence 9975 334443 1 22333689999999999999999876568889998877 8999999999999999999999999
Q ss_pred CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEE
Q 010573 360 MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVK 439 (507)
Q Consensus 360 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 439 (507)
.+++.|..||+.||.||++....+++..+|++.|++|+++++|+++++++..|+++.++.+++....++...+++.+|+|
T Consensus 311 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k 390 (458)
T 1lvl_A 311 MLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFVR 390 (458)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEE
T ss_pred ccHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEEEE
Confidence 99999999999999999987666778889999999999999999999999999999999999888888877777889999
Q ss_pred EEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHhccCCCC
Q 010573 440 ILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 506 (507)
Q Consensus 440 ~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 506 (507)
+++|+++++|+|++++|+++.|+|+.++.+|++++|+++|.+++++|||++|.+.++++.+..++.|
T Consensus 391 l~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~~~~~~~~ 457 (458)
T 1lvl_A 391 VVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAALRALGHALH 457 (458)
T ss_dssp EEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHHHHHTTCCSC
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHHHhccccc
Confidence 9999889999999999999999999999999999999999999999999999999999888777665
No 22
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2.2e-70 Score=563.21 Aligned_cols=448 Identities=28% Similarity=0.475 Sum_probs=393.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHH-CCCcEEEEe--------cCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASH 110 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie--------~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 110 (507)
|..+|||+||||||||++||.+|++ .|++|+||| +.+.+||+|.+.+|+|++.+......+..+. ....+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~-~~~~~ 82 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLR-ESAGF 82 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHH-HHHTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHh-HHHhc
Confidence 3446899999999999999999999 999999999 3578999999999999999887777666554 35566
Q ss_pred CcccCcc--ccChHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEecCCEEEEEccCC----ceEEEEeCeEEEc
Q 010573 111 GVKFSSV--EVDLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEG----GNTVVKGKNIIIA 183 (507)
Q Consensus 111 g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g----~~~~~~~d~lvlA 183 (507)
|+..... .++|..+..+.......+...+...+++. +|+++.+.+.+++.+.+.+...++ ....+.||+||||
T Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViA 162 (495)
T 2wpf_A 83 GWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLA 162 (495)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEe
Confidence 7765544 68999999999998888888888888888 999999999888888777652111 0368999999999
Q ss_pred cCCCCCC--CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhc---CCeeEEEcccCccCCCCCHHHH
Q 010573 184 TGSDVKS--LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVEFAADIVPSMDGEIR 258 (507)
Q Consensus 184 tG~~p~~--~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~~~~~d~~~~ 258 (507)
||++|.. +||. ..++++++++.+...+++++|||+|++|+|+|..|.++ |.+|+++++.+++++.+|+++.
T Consensus 163 TGs~p~~p~i~G~----~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~ 238 (495)
T 2wpf_A 163 TGSWPQMPAIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIR 238 (495)
T ss_dssp CCEEECCCCCTTG----GGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHH
T ss_pred CCCCcCCCCCCCc----cccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHH
Confidence 9998854 3443 23677888888888899999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHhcCcEEEcCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCee
Q 010573 259 KQFQRSLEKQKMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIP 337 (507)
Q Consensus 259 ~~~~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~ 337 (507)
+.+.+.+++.||+++++++|++++.+++ .+.+++. +++++++|.||+|+|++|+++.+.++.+|++++++|+|.
T Consensus 239 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~-----~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~ 313 (495)
T 2wpf_A 239 EEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFE-----SGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQ 313 (495)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEET-----TSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBC
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEEC-----CCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEE
Confidence 9999999999999999999999987654 3666664 445899999999999999998665788899999889999
Q ss_pred cCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEE
Q 010573 338 VNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYR 416 (507)
Q Consensus 338 Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~ 416 (507)
||+++||+.|+|||+|||++.+.+++.|.+||++||.||++.. ...+|..+|+++|++|+++++|+++++++..+.++.
T Consensus 314 Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~ 393 (495)
T 2wpf_A 314 VDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVA 393 (495)
T ss_dssp CCTTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHHSSEEE
T ss_pred ECCCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEE
Confidence 9999999999999999999888899999999999999999853 446788999999999999999999999998887888
Q ss_pred EEEEecCcccchhhcCCcceE-EEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHH
Q 010573 417 VGKFPFLANSRAKAIDDAEGI-VKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 495 (507)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~-~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~ 495 (507)
+.+.++....++....++.+| +|+++++++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+
T Consensus 394 v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 473 (495)
T 2wpf_A 394 VYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCS 473 (495)
T ss_dssp EEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGS
T ss_pred EEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHH
Confidence 888888888887776678899 9999999999999999999999999999999999999999999999999999999876
Q ss_pred HH
Q 010573 496 AA 497 (507)
Q Consensus 496 ~~ 497 (507)
++
T Consensus 474 ~~ 475 (495)
T 2wpf_A 474 MR 475 (495)
T ss_dssp CC
T ss_pred HH
Confidence 54
No 23
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-70 Score=560.08 Aligned_cols=450 Identities=29% Similarity=0.490 Sum_probs=387.7
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCccc--
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-- 114 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~-- 114 (507)
|..++.+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.+......+.... ....+++..
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~-~~~~~g~~~~~ 82 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVS-HANEYGLYQNL 82 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHT-TTTTTTBSTTS
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHH-hHHhcCccccc
Confidence 333445689999999999999999999999999999996 7999999999999998876665544443 234455543
Q ss_pred ---C-ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 115 ---S-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 115 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
. ...++|..+..+.+.....+...+...+++.+++++.+.+.+++++.+.+.+.+|+...+.||+||||||++|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 162 (479)
T 2hqm_A 83 PLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIF 162 (479)
T ss_dssp CCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECC
T ss_pred ccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC
Confidence 2 346789999988888888888888888889999999999888998888888777744589999999999998853
Q ss_pred ---CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh
Q 010573 191 ---LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267 (507)
Q Consensus 191 ---~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~ 267 (507)
+|+. ..++++++++.+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+|+++.+.+.+.+++
T Consensus 163 p~~i~g~----~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~ 238 (479)
T 2hqm_A 163 PENIPGF----ELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVK 238 (479)
T ss_dssp CTTSTTG----GGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCc----ccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHh
Confidence 3443 235677788888888999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEcCceEEEEEEcCCe--EEEEEeecCCCce-EEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCC
Q 010573 268 QKMKFMLKTKVVGVDLSGDG--VKLTLEPAAGGEK-TILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFAT 344 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~~--v~v~~~~~~~g~~-~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t 344 (507)
.||+++++++|++++.++++ +.+++. ++ +++++|.||+|+|++|++ .+.++..|++++++|+|.||+++||
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~-----~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t 312 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMN-----DSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQNT 312 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEET-----TSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCCTTCBC
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEEC-----CCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeECCCCcc
Confidence 99999999999999876544 566664 34 689999999999999999 4446788999998899999999999
Q ss_pred CCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC----CCCCCCCccEEEEcCCCeeeecCCHHHHHHc-C-CCEEEE
Q 010573 345 NIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH----GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVG 418 (507)
Q Consensus 345 ~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~----~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~-~~~~~~ 418 (507)
+.|+|||+|||++.+.+++.|.+||+.||.||++.. ...+|..+|+++|++|+++++|+++.+++.. + .++.+.
T Consensus 313 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~~~~ 392 (479)
T 2hqm_A 313 NVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVY 392 (479)
T ss_dssp SSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEE
T ss_pred CCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcEEEE
Confidence 999999999999888899999999999999999753 3457778999999999999999999999877 4 348888
Q ss_pred EEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHH
Q 010573 419 KFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM 498 (507)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~~ 498 (507)
.+++....++...+++.+|+|+++++++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+++.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 472 (479)
T 2hqm_A 393 NSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMRG 472 (479)
T ss_dssp EEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC-
T ss_pred EEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHHHHH
Confidence 88888888887667788999999999999999999999999999999999999999999999999999999999876653
No 24
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2.2e-70 Score=563.12 Aligned_cols=442 Identities=25% Similarity=0.434 Sum_probs=399.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.+|||+|||||+||++||.+|++.|++|+|||+ +.+||.|.+.+|+|++.+......+.... ....+|+......+++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~-~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFS-KSIGFGWKYADPIFNW 102 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-HHGGGTBCCCCCEECH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHH-HHHhCCcccCCCccCH
Confidence 368999999999999999999999999999999 78999999999999999888877766554 3567787766678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC-CC--CCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK-SL--PGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~-~~--pg~~~~~ 198 (507)
..+..+.......+...+...+++.+++++.+.+.+++...+.+. .++ ..+.||++|+|||+.|. .+ |+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~-~~~--~~~~~d~lviAtG~~p~~~p~i~G~~--- 176 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELS-VTG--ERISAEKILIATGAKIVSNSAIKGSD--- 176 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TTC--CEEEEEEEEECCCEEECCC--CBTGG---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEe-cCC--eEEEeCEEEEccCCCcccCCCCCCcc---
Confidence 999999999999998888889999999999999999988876664 244 67999999999999876 33 3322
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
.++++.+++.+...+++++|||+|++|+|+|..+.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|
T Consensus 177 -~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V 255 (484)
T 3o0h_A 177 -LCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATV 255 (484)
T ss_dssp -GSBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCE
T ss_pred -ccccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4677788888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~ 358 (507)
++++.+++++.+++. +++++++|.||+|+|++|++.++.++..|++++++|+|.||+++||++|+|||+|||++.
T Consensus 256 ~~i~~~~~~v~v~~~-----~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~ 330 (484)
T 3o0h_A 256 SQVQSTENCYNVVLT-----NGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGH 330 (484)
T ss_dssp EEEEECSSSEEEEET-----TSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTS
T ss_pred EEEEeeCCEEEEEEC-----CCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCC
Confidence 999988777777764 456899999999999999999877788899999999999999999999999999999998
Q ss_pred CCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceE
Q 010573 359 PMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGI 437 (507)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (507)
+.+++.|..||+.||.||++.. ...++..+|+++|++|+++++|+||++|++.|.++.+..+++....++...+++.++
T Consensus 331 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (484)
T 3o0h_A 331 IQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMF 410 (484)
T ss_dssp CCCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEE
T ss_pred CcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEE
Confidence 9999999999999999999864 346788999999999999999999999999999999999999988888888888999
Q ss_pred EEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 438 VKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 438 ~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|+|..++
T Consensus 411 ~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 470 (484)
T 3o0h_A 411 MKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTMY 470 (484)
T ss_dssp EEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCCC
T ss_pred EEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999998765
No 25
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=6.3e-70 Score=559.53 Aligned_cols=445 Identities=28% Similarity=0.443 Sum_probs=392.5
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCcEEEEe--------cCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK 113 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie--------~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~ 113 (507)
+|||+||||||||++||.+|++ .|++|+||| +.+.+||+|.+.+|+|++.+......+..+. ....+|+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~-~~~~~g~~ 81 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIR-ESAGFGWE 81 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHH-HHHhcCcc
Confidence 5899999999999999999999 999999999 3578999999999999999888777766554 34566765
Q ss_pred cCcc--ccChHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEecCCEEEEEc---cCCc-eEEEEeCeEEEccCC
Q 010573 114 FSSV--EVDLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDT---IEGG-NTVVKGKNIIIATGS 186 (507)
Q Consensus 114 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~---~~g~-~~~~~~d~lvlAtG~ 186 (507)
.... .++|..+..+.+.....+...+...+++. +|+++.+.+.+++++.+.+.. .+|+ ...+.||+||||||+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 5444 68999999999999888888888888888 999999999899988777764 2342 267999999999999
Q ss_pred CCCCC--CCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhc---CCeeEEEcccCccCCCCCHHHHHHH
Q 010573 187 DVKSL--PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARL---GSEVTVVEFAADIVPSMDGEIRKQF 261 (507)
Q Consensus 187 ~p~~~--pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~~~~~d~~~~~~~ 261 (507)
+|..+ |+. ..++++++++.+...+++++|||+|++|+|+|..|.++ |.+|+++++.+++++.+|+++.+.+
T Consensus 162 ~p~~p~i~g~----~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l 237 (490)
T 1fec_A 162 WPQHLGIEGD----DLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQL 237 (490)
T ss_dssp EECCCCSBTG----GGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHH
T ss_pred CCCCCCCCCc----cceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHH
Confidence 88543 333 24678888888888899999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhcCcEEEcCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCC
Q 010573 262 QRSLEKQKMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNE 340 (507)
Q Consensus 262 ~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~ 340 (507)
.+.+++.||+++++++|++++.+++ .+.+++. +++++++|.||+|+|++|+++.|.++.+|++++++|+|.||+
T Consensus 238 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~-----~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~ 312 (490)
T 1fec_A 238 TEQLRANGINVRTHENPAKVTKNADGTRHVVFE-----SGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDA 312 (490)
T ss_dssp HHHHHHTTEEEEETCCEEEEEECTTSCEEEEET-----TSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCT
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEC-----CCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECC
Confidence 9999999999999999999987654 4666664 445899999999999999998665788899999889999999
Q ss_pred CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEE
Q 010573 341 RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGK 419 (507)
Q Consensus 341 ~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~ 419 (507)
++||+.|+|||+|||++.+.+++.|.+||+.||.||++.. ...+|..+|+++|++|+++++|+++++++..+.++.+.+
T Consensus 313 ~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~~~~~~~ 392 (490)
T 1fec_A 313 YSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYE 392 (490)
T ss_dssp TCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHHCSEEEEEE
T ss_pred CCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhcCCCEEEEE
Confidence 9999999999999999888899999999999999999853 446788899999999999999999999988887888888
Q ss_pred EecCcccchhhcCCcceEE-EEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 420 FPFLANSRAKAIDDAEGIV-KILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~-k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
.++....++....++.+|+ |+++++++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 393 SSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp EEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC
T ss_pred eecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHH
Confidence 8888877777666788999 99999999999999999999999999999999999999999999999999999987654
No 26
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2.6e-70 Score=557.07 Aligned_cols=439 Identities=29% Similarity=0.502 Sum_probs=386.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.+......+..+......+++......+++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 4589999999999999999999999999999996 899999999999999888777666555423455666555567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccCCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITIDEK 199 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~~ 199 (507)
..+..+.+.....+...+...+++.+++++.+++.+++.+.+.+ ++ ..+.||+||||||++|.. +||. .
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~~p~i~g~----~ 152 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NG--ETITADHILIATGGRPSHPDIPGV----E 152 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE---TT--EEEEEEEEEECCCEEECCCCSTTG----G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE---CC--EEEEeCEEEECCCCCCCCCCCCCc----c
Confidence 99999988888888888888888999999999888888876555 45 689999999999998853 3443 2
Q ss_pred eEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 200 RIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 200 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
.+++++++..+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 232 (450)
T 1ges_A 153 YGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPK 232 (450)
T ss_dssp GSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEE
T ss_pred ceecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 35677888777778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCC
Q 010573 280 GVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (507)
Q Consensus 280 ~i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~ 358 (507)
+++.++++ +.+++. +++++++|.|++|+|++|+++.+.++.+|++++++|+|.||+++||+.|+|||+|||++.
T Consensus 233 ~i~~~~~~~~~v~~~-----~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~ 307 (450)
T 1ges_A 233 AVVKNTDGSLTLELE-----DGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGA 307 (450)
T ss_dssp EEEECTTSCEEEEET-----TSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTS
T ss_pred EEEEeCCcEEEEEEC-----CCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccCCC
Confidence 99876543 666664 445899999999999999998665678899999889999999999999999999999988
Q ss_pred CCcHhHHHHHHHHHHHHHcCCC-CC-CCCCCccEEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecCcccchhhcCCc
Q 010573 359 PMLAHKAEEDGVACVEFLAGKH-GH-VDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFLANSRAKAIDDA 434 (507)
Q Consensus 359 ~~~~~~A~~~g~~aa~~i~~~~-~~-~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 434 (507)
+.+++.|.+||+.||.||++.. .. .+|..+|+++|++|+++++|+++++++.. | .++.+...++....++...+++
T Consensus 308 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 387 (450)
T 1ges_A 308 VELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQ 387 (450)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCC
T ss_pred CccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCC
Confidence 8899999999999999999854 33 57888999999999999999999999887 5 6788888888888887766677
Q ss_pred ceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHH
Q 010573 435 EGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 495 (507)
Q Consensus 435 ~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~ 495 (507)
.+|+|+++++++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+
T Consensus 388 ~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 448 (450)
T 1ges_A 388 PCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT 448 (450)
T ss_dssp EEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999999998754
No 27
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.8e-69 Score=555.13 Aligned_cols=450 Identities=28% Similarity=0.436 Sum_probs=388.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC-------C--CCCceeccccccchhhhhhhhHHHHHHHhhhhhCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-------G--ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG 111 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-------~--~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g 111 (507)
...|||+||||||||++||.+|++.|++|+|||+. . .+||+|.+.+|+|++.+......+.... ....+|
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~-~~~~~g 85 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVH-EAAAYG 85 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHH-HHHHTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHH-HHHhcC
Confidence 34699999999999999999999999999999942 1 3899999999999998877776655443 356677
Q ss_pred cccCc-cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 112 VKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 112 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
+.... ..++|..+..+.....+.+...+...++..+++++.+.+.+++++.+.+.+.+|+ ..+.||+||||||++|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~-~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 86 WNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGE-RTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp BCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCC-EEEEEEEEEECCCEEECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCe-EEEEcCEEEEeCCCCcCC
Confidence 76643 5789999999999998888888888888999999999999999999999887774 679999999999998853
Q ss_pred --CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc
Q 010573 191 --LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268 (507)
Q Consensus 191 --~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~ 268 (507)
+||.. ...+++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++ +.+++.+|+++.+.+.+.+++.
T Consensus 165 p~i~G~~---~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~ 240 (483)
T 3dgh_A 165 PDIPGAV---EYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEER 240 (483)
T ss_dssp CSSTTHH---HHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHT
T ss_pred CCCCCcc---cccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhC
Confidence 44432 23467888888888899999999999999999999999999999988 5678899999999999999999
Q ss_pred CcEEEcCceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCC
Q 010573 269 KMKFMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIP 347 (507)
Q Consensus 269 Gv~i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~ 347 (507)
||++++++.+++++.+++ .+.+++.+..+++..++++|.|++|+|++|+++++.++..|+++++ |+|.||+++||++|
T Consensus 241 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t~~~ 319 (483)
T 3dgh_A 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVA 319 (483)
T ss_dssp TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBCSST
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCccCCC
Confidence 999999999999987544 4677776654455668999999999999999998777889999998 99999999999999
Q ss_pred CeEEecCCC-CCCCcHhHHHHHHHHHHHHHcCCCC-CCCCCCccEEEEcCCCeeeecCCHHHHHHc-C-CCEEEEEEecC
Q 010573 348 GVYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKHG-HVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEYRVGKFPFL 423 (507)
Q Consensus 348 ~IyA~GD~a-~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~-~~~~~~~~~~~ 423 (507)
+|||+|||+ +.|.+++.|..||+.||+||++... ..+|..+|+++|++|+++++|+||++|++. + ..+.+...++.
T Consensus 320 ~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~ 399 (483)
T 3dgh_A 320 NIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYK 399 (483)
T ss_dssp TEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECC
T ss_pred CEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEEeec
Confidence 999999998 6688999999999999999998653 467889999999999999999999999875 3 35666665665
Q ss_pred cccchhh-cCCcceEEEEEEECC-CCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 424 ANSRAKA-IDDAEGIVKILAEKE-TDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 424 ~~~~~~~-~~~~~~~~k~~~~~~-~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
...++.. ...+.+|+|+++|++ +++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++..++
T Consensus 400 ~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (483)
T 3dgh_A 400 PTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLA 475 (483)
T ss_dssp CGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGGCC
T ss_pred chhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 5443322 234679999999986 8999999999999999999999999999999999999999999999987654
No 28
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=2.3e-69 Score=551.85 Aligned_cols=441 Identities=31% Similarity=0.534 Sum_probs=387.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+.+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.+......+.... ....+++.......+
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~-~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVR-DAPGFGVQASGGTLD 79 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTBCCC---CC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHh-hhhhcCcccCCCCcC
Confidence 34689999999999999999999999999999996 8999999999999998877776665544 345566665556788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITIDE 198 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~ 198 (507)
+..+..+.......+...+...+++.+++++.+.+.+++.+.+.+ +| ..+.||+||||||++|.. +||.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~~p~i~G~---- 150 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV---EG--QRLSADHIVIATGGRPIVPRLPGA---- 150 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE---TT--EEEEEEEEEECCCEEECCCSCTTG----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE---CC--EEEEcCEEEECCCCCCCCCCCCCc----
Confidence 999999998888888888888888999999999888888876655 55 679999999999998853 3443
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..+++++++..+...+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 230 (463)
T 2r9z_A 151 ELGITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAV 230 (463)
T ss_dssp GGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCE
T ss_pred cceecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 23567778877777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceE-EEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKT-ILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~-~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
++++.+++++.+++. +++ ++++|.|++|+|++|+++.+.++.+|++++++|+|.||+++||+.|+|||+|||++
T Consensus 231 ~~i~~~~~~~~v~~~-----~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~ 305 (463)
T 2r9z_A 231 AALERDAQGTTLVAQ-----DGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITG 305 (463)
T ss_dssp EEEEEETTEEEEEET-----TCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGT
T ss_pred EEEEEeCCeEEEEEe-----CCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCC
Confidence 999877667777764 445 79999999999999999866567789999988999999999999999999999998
Q ss_pred CCCcHhHHHHHHHHHHHHHcCCC-CC-CCCCCccEEEEcCCCeeeecCCHHHHHHc-CCCEEEEEEecCcccchhhcCCc
Q 010573 358 GPMLAHKAEEDGVACVEFLAGKH-GH-VDYDKVPGVVYTHPEVASVGKTEEQVKEL-GVEYRVGKFPFLANSRAKAIDDA 434 (507)
Q Consensus 358 ~~~~~~~A~~~g~~aa~~i~~~~-~~-~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 434 (507)
.+.+++.|.+||+.+|.||++.. .. .+|..+|+++|++|+++++|+++++++.. |.++.+...++....++...+.+
T Consensus 306 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 385 (463)
T 2r9z_A 306 RDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEHGP 385 (463)
T ss_dssp SCCCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCC
T ss_pred CcccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCC
Confidence 88899999999999999999854 23 57888999999999999999999999886 67888888888888887766678
Q ss_pred ceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 435 EGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 435 ~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
.+|+|+++++++++|+|+|++|+++.|+|+.+++||+.++|++||.+++++|||++|++.+++
T Consensus 386 ~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 448 (463)
T 2r9z_A 386 KTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLK 448 (463)
T ss_dssp CEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGCCC
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHH
Confidence 899999999989999999999999999999999999999999999999999999999987654
No 29
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-67 Score=544.26 Aligned_cols=441 Identities=27% Similarity=0.451 Sum_probs=370.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.+.........+. ....+|+... ..+++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~-~~~~~g~~~~-~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILE-NSRHYGFDTK-FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHH-HGGGGTCCCC-CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHH-hhHhcCCccC-CccCHH
Confidence 489999999999999999999999999999996 6999999999999998877665555443 3445566544 567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEcc---------CCceEEEEeCeEEEccCCCCCC--C
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTI---------EGGNTVVKGKNIIIATGSDVKS--L 191 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~---------~g~~~~~~~d~lvlAtG~~p~~--~ 191 (507)
.+..+.+..+..+...+...+++.+++++.+++.+++.+.+.+... ++....+.||+||||||++|.. +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i 158 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPV 158 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCC
Confidence 9998888888888888888888999999999877777655555320 1112679999999999999853 3
Q ss_pred CCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcE
Q 010573 192 PGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 192 pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
||. ..+++++++..+.. +++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+.+.+++.||+
T Consensus 159 ~G~----~~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~ 233 (500)
T 1onf_A 159 KGI----ENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNIN 233 (500)
T ss_dssp TTG----GGCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCC----CcccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCE
Confidence 443 23667778877766 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCceEEEEEEcCC-eEEEEEeecCCCceEE-EEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCe
Q 010573 272 FMLKTKVVGVDLSGD-GVKLTLEPAAGGEKTI-LEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (507)
Q Consensus 272 i~~~~~v~~i~~~~~-~v~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~I 349 (507)
+++++++++++.+++ .+.+++. ++++ +++|.|++|+|++|+++.|.++.+|+++ ++|+|.||+++||+.|+|
T Consensus 234 i~~~~~v~~i~~~~~~~~~v~~~-----~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~~~i 307 (500)
T 1onf_A 234 IVTFADVVEIKKVSDKNLSIHLS-----DGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNI 307 (500)
T ss_dssp EECSCCEEEEEESSTTCEEEEET-----TSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSSSSE
T ss_pred EEECCEEEEEEEcCCceEEEEEC-----CCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCCCCE
Confidence 999999999987643 3666664 3445 9999999999999999765567889998 779999999999999999
Q ss_pred EEecCCC----------------------------------CCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEc
Q 010573 350 YAIGDVI----------------------------------PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYT 394 (507)
Q Consensus 350 yA~GD~a----------------------------------~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~ 394 (507)
||+|||+ +.+.+++.|.+||+.||+||++.. ...+|..+|+++|+
T Consensus 308 ya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~ 387 (500)
T 1onf_A 308 YAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFS 387 (500)
T ss_dssp EECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEEECC
T ss_pred EEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeEEEc
Confidence 9999999 566799999999999999999753 34678889999999
Q ss_pred CCCeeeecCCHHHHHHc-C-CCEEEEEEecCcccchh----hcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHH
Q 010573 395 HPEVASVGKTEEQVKEL-G-VEYRVGKFPFLANSRAK----AIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVL 468 (507)
Q Consensus 395 ~~~~~~vG~~~~~~~~~-~-~~~~~~~~~~~~~~~~~----~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~ 468 (507)
+|+++++|+++++++.. | .++.+...++....++. ...++.+|+|+++|+++++|||+|++|+++.|+|+.+++
T Consensus 388 ~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ 467 (500)
T 1onf_A 388 HPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAV 467 (500)
T ss_dssp SSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHH
T ss_pred CcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHH
Confidence 99999999999999887 4 68888888888887776 345678999999999999999999999999999999999
Q ss_pred HHHCCCCHHHHhcCcCCCCChHHHHHHHH
Q 010573 469 AINYDASSEDIARVCHAHPTMSEALKEAA 497 (507)
Q Consensus 469 ~i~~~~~~~~l~~~~~~~p~~~~~~~~~~ 497 (507)
||+.++|++||.+++++|||++|++..++
T Consensus 468 ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 468 ALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp HHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred HHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 99999999999999999999999997654
No 30
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=3.8e-68 Score=550.68 Aligned_cols=440 Identities=24% Similarity=0.381 Sum_probs=373.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
+..++||+|||||+||++||.+|++.|++|+|||+++.+||+|.+.+|+|++.+......+....+ ...+++ +..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~~g~-~~~--- 114 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLART-FSGQYW-FPD--- 114 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHH-TTTSTT-CCC---
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhh-hhhcCc-HHH---
Confidence 455799999999999999999999999999999998779999999999999988776666554432 233443 111
Q ss_pred ChHHHHHH---HHHHHHHHHHHHH---HHH-----HhCCcEEE-EeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC
Q 010573 120 DLPAMMAQ---KDKAVSNLTRGIE---GLF-----KKNKVTYV-KGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD 187 (507)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~---~~~-----~~~~v~~~-~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~ 187 (507)
+..+ .+.....+...+. .++ ++.+++++ .+.+.+++.+.+.+. + ..+.||+||+|||++
T Consensus 115 ----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~---g--~~~~~d~lViATGs~ 185 (523)
T 1mo9_A 115 ----MTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA---G--KVFKAKNLILAVGAG 185 (523)
T ss_dssp ----CTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET---T--EEEEBSCEEECCCEE
T ss_pred ----HHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC---C--EEEEeCEEEECCCCC
Confidence 1111 2222333333233 455 77899998 778888887765553 4 679999999999998
Q ss_pred CCC--CCCCccCCceEecchhhc-cccCCC-CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHH
Q 010573 188 VKS--LPGITIDEKRIVSSTGAL-ALNEVP-KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQR 263 (507)
Q Consensus 188 p~~--~pg~~~~~~~~~~~~~~~-~~~~~~-~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~ 263 (507)
|.. +||.. ...++++.++. .+...+ ++++|||+|++|+|+|..+.+.|.+|+++++.+++++.+++++.+.+.+
T Consensus 186 p~~p~i~G~~--~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~ 263 (523)
T 1mo9_A 186 PGTLDVPGVN--AKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLD 263 (523)
T ss_dssp CCCCCSTTTT--SBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHH
T ss_pred CCCCCCCCcc--cCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHH
Confidence 854 34443 33477888888 777777 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcEEEcCceEEEEEEcCCe----EEEEEeecCCCceE-EEEcCEEEEeecCCCCCC-CCCCcccCceecCCCCee
Q 010573 264 SLEKQKMKFMLKTKVVGVDLSGDG----VKLTLEPAAGGEKT-ILEADVVLVSAGRTPFTA-GLGLDKIGVETDKMGRIP 337 (507)
Q Consensus 264 ~l~~~Gv~i~~~~~v~~i~~~~~~----v~v~~~~~~~g~~~-~i~~D~vi~a~G~~p~~~-~l~~~~~gl~~~~~G~i~ 337 (507)
.+++.||+++++++|++++.++++ +.+++. +++ ++++|.||+|+|++|++. + ++..|++++++|+|.
T Consensus 264 ~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~-----~G~~~i~aD~Vv~A~G~~p~~~~~--l~~~gl~~~~~G~i~ 336 (523)
T 1mo9_A 264 RMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTP-----NGEMRIETDFVFLGLGEQPRSAEL--AKILGLDLGPKGEVL 336 (523)
T ss_dssp HHHHTTCEEESSCEEEEEEECTTSBEEEEEEEET-----TEEEEEECSCEEECCCCEECCHHH--HHHHTCCBCTTSCBC
T ss_pred HHHhCCcEEEECCEEEEEEEcCCCceEEEEEEEC-----CCcEEEEcCEEEECcCCccCCccC--HHHcCCccCCCCCEE
Confidence 999999999999999999875554 556653 455 899999999999999997 4 678899998889999
Q ss_pred cCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEE
Q 010573 338 VNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRV 417 (507)
Q Consensus 338 Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 417 (507)
||+++||+.|+|||+|||++.+.+++.|..||+.||.||++...++++..+|+++|++|+++++|+|+++|+..|+++.+
T Consensus 337 Vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~ 416 (523)
T 1mo9_A 337 VNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVT 416 (523)
T ss_dssp CCTTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSEEEEEECCHHHHHHTTCCEEE
T ss_pred ECCCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhCCCCEEE
Confidence 99999999999999999999889999999999999999998766667888999999999999999999999999999999
Q ss_pred EEEecCc--------------ccchhhc--CCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhc
Q 010573 418 GKFPFLA--------------NSRAKAI--DDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIAR 481 (507)
Q Consensus 418 ~~~~~~~--------------~~~~~~~--~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 481 (507)
..+++.. ..++.+. +++.+|+|+++|+++++|||+|++|+++.|+|+.++.||++++|+++|.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~ 496 (523)
T 1mo9_A 417 IKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGD 496 (523)
T ss_dssp EEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHT
T ss_pred EEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHh
Confidence 9988876 6677777 67789999999988999999999999999999999999999999999999
Q ss_pred C--cCCCCChHHHHHHHHHHhcc
Q 010573 482 V--CHAHPTMSEALKEAAMATHD 502 (507)
Q Consensus 482 ~--~~~~p~~~~~~~~~~~~~~~ 502 (507)
+ +++|||++|++.++++...|
T Consensus 497 ~~~~~~~Pt~~e~~~~~~~~~~~ 519 (523)
T 1mo9_A 497 MDELFLNPTHFIQLSRLRAGSKN 519 (523)
T ss_dssp SCCCSSCSCCHHHHHHHHTTCSS
T ss_pred CCcceECCCHHHHHHHHHHhhHh
Confidence 9 99999999999998877655
No 31
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.4e-63 Score=524.00 Aligned_cols=452 Identities=29% Similarity=0.450 Sum_probs=377.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC-C-------CCCceeccccccchhhhhhhhHHHHHHHhhhhhCCc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-G-------ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV 112 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~-------~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~ 112 (507)
...|||+||||||||++||.+|++.|++|+|||+. + .+||+|.+.+|+|++.+.......... .....+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~-~~~~~~g~ 183 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHAL-EDAEHFGW 183 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHH-HHHHHTTC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHH-hhHHhCCc
Confidence 45689999999999999999999999999999973 2 489999999999999887665544433 33456676
Q ss_pred ccCc--cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 113 KFSS--VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 113 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
.... ...+|..+..+....+..+...+...+...+|+++.+.+.+++.+.+.+...+|+...+.||+||||||++|..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~ 263 (598)
T 2x8g_A 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKY 263 (598)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCC
Confidence 5432 46788999888888887777666667778899999999999999998888777755679999999999998853
Q ss_pred --CCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhc
Q 010573 191 --LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 268 (507)
Q Consensus 191 --~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~ 268 (507)
+||.. ...++..+++.+...+++++|||+|++|+|+|..|+++|.+||++++. .+++.+|+++.+.+.+.+++.
T Consensus 264 p~i~G~~---~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~ 339 (598)
T 2x8g_A 264 PEIPGAV---EYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENH 339 (598)
T ss_dssp CSSTTHH---HHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHT
T ss_pred CCCCCcc---cceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhC
Confidence 34432 234566777777777899999999999999999999999999999988 678889999999999999999
Q ss_pred CcEEEcCceEEEEEEc------C---CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecC
Q 010573 269 KMKFMLKTKVVGVDLS------G---DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVN 339 (507)
Q Consensus 269 Gv~i~~~~~v~~i~~~------~---~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd 339 (507)
||++++++.+++++.. + +.+.+.+.. .+|+...+++|.|++|+|++|+++++.++..|++++++|+|.||
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd 418 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHY-TDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCT 418 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEE-TTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCC
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEe-CCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeC
Confidence 9999999988888542 2 445554322 22333345699999999999999876667889999988999999
Q ss_pred CCCCCCCCCeEEecCCC-CCCCcHhHHHHHHHHHHHHHcCCC-CCCCCCCccEEEEcCCCeeeecCCHHHHHHc-C-CCE
Q 010573 340 ERFATNIPGVYAIGDVI-PGPMLAHKAEEDGVACVEFLAGKH-GHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-G-VEY 415 (507)
Q Consensus 340 ~~~~t~~~~IyA~GD~a-~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~~~vG~~~~~~~~~-~-~~~ 415 (507)
+++||++|+|||+|||+ +.+.+++.|.+||+.||.||++.. ...+|..+|.++|++|+++++|+++.+++.. + ..+
T Consensus 419 ~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~ 498 (598)
T 2x8g_A 419 DDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDI 498 (598)
T ss_dssp TTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGE
T ss_pred CCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHHHHhhCCCCcE
Confidence 99999999999999995 557899999999999999999654 3467888999999999999999999999876 4 347
Q ss_pred EEEEEecCcccchhhcC-CcceEEEEEEEC-CCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHH
Q 010573 416 RVGKFPFLANSRAKAID-DAEGIVKILAEK-ETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAL 493 (507)
Q Consensus 416 ~~~~~~~~~~~~~~~~~-~~~~~~k~~~~~-~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~ 493 (507)
.+...++....++.... ...+|+|+++++ ++++|||+|++|+++.++|+.+++||++++|++||.+++++|||++|++
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 578 (598)
T 2x8g_A 499 EVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETF 578 (598)
T ss_dssp EEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGG
T ss_pred EEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCCHHHHH
Confidence 77777777766665543 367999999995 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 010573 494 KEAAM 498 (507)
Q Consensus 494 ~~~~~ 498 (507)
..++.
T Consensus 579 ~~~~~ 583 (598)
T 2x8g_A 579 TTLHV 583 (598)
T ss_dssp GSCCC
T ss_pred HHHHH
Confidence 87764
No 32
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.3e-60 Score=481.12 Aligned_cols=401 Identities=20% Similarity=0.288 Sum_probs=310.5
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+||||||||||++||.+|++.| .+|+|||+++..++. ..|+|.. +. .........+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~---~~~l~~~---------------~~-~~~~~~~~~~~~- 61 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA---NCALPYV---------------IG-EVVEDRRYALAY- 61 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBC---GGGHHHH---------------HT-TSSCCGGGTBCC-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCC---cchhHHH---------------Hc-CCccchhhhhhc-
Confidence 6999999999999999999987 579999997654331 1122211 00 000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEc---cCCceEEEEeCeEEEccCCCCCCCCCCccCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDT---IEGGNTVVKGKNIIIATGSDVKSLPGITIDE 198 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~---~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~ 198 (507)
..+.++++.+++++.+ .+..+|.....+.. ..++...+.||+||||||++|..+ +.+.+.
T Consensus 62 ---------------~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p-~i~g~~ 125 (437)
T 4eqs_A 62 ---------------TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDI 125 (437)
T ss_dssp ---------------CHHHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCC-CCCCTT
T ss_pred ---------------CHHHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccc-cccCce
Confidence 0134556678998876 46677655443332 334457899999999999998643 232222
Q ss_pred c-eEecchhhcccc-----CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEE
Q 010573 199 K-RIVSSTGALALN-----EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (507)
Q Consensus 199 ~-~~~~~~~~~~~~-----~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i 272 (507)
. .+.+..++..++ ..+++++|||+|++|+|+|..+.++|.+||++++.+++++.+|+++.+.+.+.++++||++
T Consensus 126 ~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 126 TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPY 205 (437)
T ss_dssp EECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCE
T ss_pred EEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEE
Confidence 1 122334443332 3488999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEe
Q 010573 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 352 (507)
++++.|++++ ++. ++++ +++++++|.|++|+|++||+++ ++..|++++++|+|.||+++|||+|||||+
T Consensus 206 ~~~~~v~~~~--~~~--v~~~-----~g~~~~~D~vl~a~G~~Pn~~~--~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~ 274 (437)
T 4eqs_A 206 RLNEEINAIN--GNE--ITFK-----SGKVEHYDMIIEGVGTHPNSKF--IESSNIKLDRKGFIPVNDKFETNVPNIYAI 274 (437)
T ss_dssp EESCCEEEEE--TTE--EEET-----TSCEEECSEEEECCCEEESCGG--GTTSSCCCCTTSCEECCTTCBCSSTTEEEC
T ss_pred EeccEEEEec--CCe--eeec-----CCeEEeeeeEEEEeceecCcHH--HHhhhhhhccCCcEecCCCccCCCCCEEEE
Confidence 9999999885 333 4443 5678999999999999999986 678899999999999999999999999999
Q ss_pred cCCCCC----------CCcHhHHHHHHHHHHHHHcCCCCC--CCCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEEE
Q 010573 353 GDVIPG----------PMLAHKAEEDGVACVEFLAGKHGH--VDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKF 420 (507)
Q Consensus 353 GD~a~~----------~~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~ 420 (507)
|||++. +++++.|.+||+++|+||+|.+.. ..+..+|.+.|++|++++||+||++|+..+++ +..+
T Consensus 275 GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~--~~~~ 352 (437)
T 4eqs_A 275 GDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYK--MVEV 352 (437)
T ss_dssp GGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEE--EEEE
T ss_pred EEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCce--EEEE
Confidence 999853 347899999999999999987642 24566788999999999999999999876644 4444
Q ss_pred ecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHhcCcCC-CCChHHHHHH
Q 010573 421 PFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAVLAINYDASSEDIARVCHA-HPTMSEALKE 495 (507)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~~~~~-~p~~~~~~~~ 495 (507)
++....+. ..++++||+|+++|+++++|||+|++|++ +.|+|+.+++||++++|++||.+++++ ||+|+++++.
T Consensus 353 ~~~~~~~~-~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~~d~ 428 (437)
T 4eqs_A 353 TQGAHANY-YPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHPKDL 428 (437)
T ss_dssp EEESSCTT-SSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCH
T ss_pred ecCCchhh-cCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCchHHH
Confidence 44433332 23567899999999999999999999985 899999999999999999999999765 8999986433
No 33
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.1e-59 Score=475.44 Aligned_cols=409 Identities=21% Similarity=0.252 Sum_probs=319.8
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+||+|||||+||++||.+|++. |++|+|||+++.+|. .|............ ......
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~-------~~~~~~~~~~~~~~-----------~~~~~~--- 61 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGY-------LSGGLSAYFNHTIN-----------ELHEAR--- 61 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSS-------CCC---------------------------C---
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcc-------cCccchhhhcCCCC-----------CHHHhh---
Confidence 5999999999999999999998 899999999876652 22111000000000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCC--EEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~--~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~ 198 (507)
....+++++.+++++.+ .+..++.. .+.+.. .++...+.||++|||||++|..++....+.
T Consensus 62 ---------------~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~-~~~~~~~~~d~lviAtG~~p~~p~i~g~~~ 125 (452)
T 3oc4_A 62 ---------------YITEEELRRQKIQLLLNREVVAMDVENQLIAWTR-KEEQQWYSYDKLILATGASQFSTQIRGSQT 125 (452)
T ss_dssp ---------------CCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCCCBCCCCCBTTTC
T ss_pred ---------------cCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEe-cCceEEEEcCEEEECCCcccCCCCCCCCCC
Confidence 00124556678988765 56666544 444431 223478999999999999985443222223
Q ss_pred ceEecchhh------ccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-CCHHHHHHHHHHHHhcCcE
Q 010573 199 KRIVSSTGA------LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 199 ~~~~~~~~~------~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-~d~~~~~~~~~~l~~~Gv~ 271 (507)
..+++..+. ......+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +|+++.+.+.+.+++.||+
T Consensus 126 ~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~ 205 (452)
T 3oc4_A 126 EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVI 205 (452)
T ss_dssp TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEE
T ss_pred CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCE
Confidence 445554433 223346899999999999999999999999999999999999885 8999999999999999999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
++++++|++++.+++++.+.+. ++ ++++|.|++|+|++|+++++ +.. ++++++|+|.||+++||+.|+|||
T Consensus 206 i~~~~~v~~i~~~~~~v~v~~~-----~g-~i~aD~Vv~A~G~~p~~~~l--~~~-~~~~~~g~i~vd~~~~t~~~~IyA 276 (452)
T 3oc4_A 206 FHFEETVLGIEETANGIVLETS-----EQ-EISCDSGIFALNLHPQLAYL--DKK-IQRNLDQTIAVDAYLQTSVPNVFA 276 (452)
T ss_dssp EEETCCEEEEEECSSCEEEEES-----SC-EEEESEEEECSCCBCCCSSC--CTT-SCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred EEeCCEEEEEEccCCeEEEEEC-----CC-EEEeCEEEECcCCCCChHHH--Hhh-hccCCCCCEEECcCccCCCCCEEE
Confidence 9999999999876777766653 33 89999999999999999864 333 788888999999999999999999
Q ss_pred ecCCCCCC----------CcHhHHHHHHHHHHHHHcCCCCCC--CCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEEEE
Q 010573 352 IGDVIPGP----------MLAHKAEEDGVACVEFLAGKHGHV--DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGK 419 (507)
Q Consensus 352 ~GD~a~~~----------~~~~~A~~~g~~aa~~i~~~~~~~--~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~ 419 (507)
+|||++.+ ++++.|..||+.||.||++..... .+..+|+.+|+ |+++++|+||++|++.|+++.+..
T Consensus 277 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~-~~~a~vG~te~~a~~~g~~~~~~~ 355 (452)
T 3oc4_A 277 IGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGD-YYLASTGLTETEGLFFPQTLASII 355 (452)
T ss_dssp CGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEETT-EEEEEEECCSGGGGGSSSCEEEEE
T ss_pred EEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEcC-eeEEEecCCHHHHHHCCCceEEEE
Confidence 99999753 589999999999999999875443 45667888885 699999999999999999999888
Q ss_pred EecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECC-ChHHHHHHHHHHHHCCCCHHHHhcC-cCCCCChHHH---HH
Q 010573 420 FPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAP-NAGELIHEAVLAINYDASSEDIARV-CHAHPTMSEA---LK 494 (507)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~-~~~~~~~~~~~~i~~~~~~~~l~~~-~~~~p~~~~~---~~ 494 (507)
+++.. ++ ..+++.+|+|+++++++++|||+|++|+ ++.|+|+.++.||++++|++||.++ +++|||++|+ +.
T Consensus 356 ~~~~~--~~-~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~~ 432 (452)
T 3oc4_A 356 VRQPA--PP-LQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNIYDITN 432 (452)
T ss_dssp EEEEC--TT-TTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCSSCHHH
T ss_pred EecCC--cc-CCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCchhHHH
Confidence 77644 33 3456789999999999999999999999 7999999999999999999999999 6899999995 55
Q ss_pred HHHHHhcc
Q 010573 495 EAAMATHD 502 (507)
Q Consensus 495 ~~~~~~~~ 502 (507)
.+++.+..
T Consensus 433 ~a~~~~~~ 440 (452)
T 3oc4_A 433 LMGASAYW 440 (452)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55655544
No 34
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.9e-58 Score=470.46 Aligned_cols=405 Identities=22% Similarity=0.318 Sum_probs=320.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
++||+|||||+||++||..|++. +++|+|||+++.+++... .+|.. +. +. .+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~---~~p~~---------------~~--~~------~~ 56 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC---GIPYV---------------VE--GL------ST 56 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc---CCccc---------------cC--CC------CC
Confidence 47999999999999999999998 789999999876653210 01110 00 00 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCcc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI 196 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~ 196 (507)
. ..+.....+.+ ++.+++++.+ .+..++.+...+.+.++ ...+.||+||+|||++|. .+||...
T Consensus 57 ~-----------~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g-~~~~~~d~lviAtG~~p~~p~i~G~~~ 124 (449)
T 3kd9_A 57 P-----------DKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGG-EKSYEWDYLVFANGASPQVPAIEGVNL 124 (449)
T ss_dssp --------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSS-EEEEECSEEEECCCEEECCCSCBTTTS
T ss_pred H-----------HHhhhcCHHHHHHhcCcEEEecCEEEEEecCCCEEEECCc-eEEEEcCEEEECCCCCCCCCCCCCCCC
Confidence 0 00111111223 5679999988 78889988888877655 357999999999999885 3455432
Q ss_pred CCceEec---chhhccccC-----CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-CCHHHHHHHHHHHHh
Q 010573 197 DEKRIVS---STGALALNE-----VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEK 267 (507)
Q Consensus 197 ~~~~~~~---~~~~~~~~~-----~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-~d~~~~~~~~~~l~~ 267 (507)
..+++ ..++..+.. .+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.+++
T Consensus 125 --~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 202 (449)
T 3kd9_A 125 --KGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKK 202 (449)
T ss_dssp --TTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTT
T ss_pred --CCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHh
Confidence 23433 334433221 5789999999999999999999999999999999999886 999999999999999
Q ss_pred cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCC
Q 010573 268 QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIP 347 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~ 347 (507)
. |++++++.+.+++.++ .+...+. +++++++|.|++|+|++|++++ ++.+|++++++|+|.||+++||+.|
T Consensus 203 ~-v~i~~~~~v~~i~~~~-~v~~v~~-----~g~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~~~G~i~vd~~~~t~~~ 273 (449)
T 3kd9_A 203 H-VNLRLQEITMKIEGEE-RVEKVVT-----DAGEYKAELVILATGIKPNIEL--AKQLGVRIGETGAIWTNEKMQTSVE 273 (449)
T ss_dssp T-SEEEESCCEEEEECSS-SCCEEEE-----TTEEEECSEEEECSCEEECCHH--HHHTTCCBCTTSSBCCCTTCBCSST
T ss_pred C-cEEEeCCeEEEEeccC-cEEEEEe-----CCCEEECCEEEEeeCCccCHHH--HHhCCccCCCCCCEEECCCCccCCC
Confidence 9 9999999999997654 3332232 4578999999999999999976 6788999999999999999999999
Q ss_pred CeEEecCCCC-------C---CCcHhHHHHHHHHHHHHHcCCCCCCC-CCCccEEEEcCCCeeeecCCHHHHHHcCCCEE
Q 010573 348 GVYAIGDVIP-------G---PMLAHKAEEDGVACVEFLAGKHGHVD-YDKVPGVVYTHPEVASVGKTEEQVKELGVEYR 416 (507)
Q Consensus 348 ~IyA~GD~a~-------~---~~~~~~A~~~g~~aa~~i~~~~~~~~-~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~ 416 (507)
+|||+|||+. . +.+++.|..||+.||+||+|...... +...|++.|++|+++++|+||++|++.|+++.
T Consensus 274 ~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~ 353 (449)
T 3kd9_A 274 NVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVR 353 (449)
T ss_dssp TEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEE
T ss_pred CEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceE
Confidence 9999999983 2 46899999999999999998765443 34568899999999999999999999999998
Q ss_pred EEEEecCcccchhhc-CCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCc-CCCCChHHHHH
Q 010573 417 VGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVC-HAHPTMSEALK 494 (507)
Q Consensus 417 ~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~-~~~p~~~~~~~ 494 (507)
+..++ ...++... +++.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++ ++||++++.+.
T Consensus 354 ~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~~ 431 (449)
T 3kd9_A 354 TAFIK--ASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVWD 431 (449)
T ss_dssp EEEEE--EESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSSC
T ss_pred EEEEe--cCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCchh
Confidence 88765 34555555 5678999999999999999999999999999999999999999999999984 57999998755
Q ss_pred HHHH
Q 010573 495 EAAM 498 (507)
Q Consensus 495 ~~~~ 498 (507)
.+..
T Consensus 432 ~~~~ 435 (449)
T 3kd9_A 432 PLIV 435 (449)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 35
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.3e-58 Score=474.69 Aligned_cols=421 Identities=23% Similarity=0.298 Sum_probs=301.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
++||+|||||+||++||..|++. |++|+|||+++.++.. .| +|... ... +.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~----~~gl~~~~-----------~g~-----~~------ 56 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG----GCGIPYYV-----------SGE-----VS------ 56 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccc----ccccchhh-----------cCC-----CC------
Confidence 46999999999999999999998 8999999997765421 11 11100 000 00
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEcc---CCceEEEEeCeEEEccCCCCC--CCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTI---EGGNTVVKGKNIIIATGSDVK--SLPG 193 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~---~g~~~~~~~d~lvlAtG~~p~--~~pg 193 (507)
....+.+.. ..+....+.+.++.+++++.+ .+..++.....+.+. +|+...+.||+||+|||++|. .+||
T Consensus 57 ~~~~~~~~~----~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G 132 (472)
T 3iwa_A 57 NIESLQATP----YNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEG 132 (472)
T ss_dssp ----------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTT
T ss_pred chHHhcccc----chhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCC
Confidence 000000000 001111122333568888665 566666544444333 365568999999999999874 4555
Q ss_pred CccCCce-Eecchhhcccc-----CCCCeEEEEcCcHHHHHHHHHHHhc-CCeeEEEcccCccCC-CCCHHHHHHHHHHH
Q 010573 194 ITIDEKR-IVSSTGALALN-----EVPKKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADIVP-SMDGEIRKQFQRSL 265 (507)
Q Consensus 194 ~~~~~~~-~~~~~~~~~~~-----~~~~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l 265 (507)
....+.. +.+..+...+. ..+++++|||+|.+|+|+|..+.+. |.+|+++++.+++++ .+++++.+.+.+.+
T Consensus 133 ~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 212 (472)
T 3iwa_A 133 MDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDL 212 (472)
T ss_dssp TTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHH
Confidence 5422221 22334444433 4589999999999999999999999 999999999999998 99999999999999
Q ss_pred HhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCC
Q 010573 266 EKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATN 345 (507)
Q Consensus 266 ~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~ 345 (507)
++.||+++++++|++++.+++.+.+.+. +++++++|.||+|+|++|++.+ ++..|++++++|+|.||+++||+
T Consensus 213 ~~~GV~i~~~~~v~~i~~~~~~v~v~~~-----~g~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~~~g~i~vd~~~~t~ 285 (472)
T 3iwa_A 213 EKNDVVVHTGEKVVRLEGENGKVARVIT-----DKRTLDADLVILAAGVSPNTQL--ARDAGLELDPRGAIIVDTRMRTS 285 (472)
T ss_dssp HHTTCEEECSCCEEEEEESSSBEEEEEE-----SSCEEECSEEEECSCEEECCHH--HHHHTCCBCTTCCEECCTTCBCS
T ss_pred HhcCCEEEeCCEEEEEEccCCeEEEEEe-----CCCEEEcCEEEECCCCCcCHHH--HHhCCccCCCCCCEEECCCcccC
Confidence 9999999999999999887777777765 4568999999999999999875 56788999999999999999999
Q ss_pred CCCeEEecCCC-------CC---CCcHhHHHHHHHHHHHHHcCCCCCCC-CCCccEEEEcCCCeeeecCCHHHHHHcCCC
Q 010573 346 IPGVYAIGDVI-------PG---PMLAHKAEEDGVACVEFLAGKHGHVD-YDKVPGVVYTHPEVASVGKTEEQVKELGVE 414 (507)
Q Consensus 346 ~~~IyA~GD~a-------~~---~~~~~~A~~~g~~aa~~i~~~~~~~~-~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~ 414 (507)
.|+|||+|||+ +. +.+++.|..||++||+||+|...... ....+.+.|++|+++++|+||++|++.|++
T Consensus 286 ~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~ 365 (472)
T 3iwa_A 286 DPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYD 365 (472)
T ss_dssp STTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCC
T ss_pred CCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCCc
Confidence 99999999998 32 35789999999999999998764421 122334568899999999999999999999
Q ss_pred EEEEEEecCcccchhhc-CCcceEEEEEEECCCCeEEEEEEECC---ChHHHHHHHHHHHHCCCCHHHHhcCcCCC-CCh
Q 010573 415 YRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAP---NAGELIHEAVLAINYDASSEDIARVCHAH-PTM 489 (507)
Q Consensus 415 ~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~ilG~~~~g~---~~~~~~~~~~~~i~~~~~~~~l~~~~~~~-p~~ 489 (507)
+.+..++ ...++.++ +++++|+|+++|+++++|||+|++|+ .+.|+|+.+++||++++|++||.+++++| ||+
T Consensus 366 ~~~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~ 443 (472)
T 3iwa_A 366 AVNVHVE--QFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPF 443 (472)
T ss_dssp EEEEEEE--C-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC-----
T ss_pred eEEEEEe--cCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCC
Confidence 9988754 45566666 67889999999999999999999999 45899999999999999999999999987 999
Q ss_pred HHHHH---HHHHHhcc
Q 010573 490 SEALK---EAAMATHD 502 (507)
Q Consensus 490 ~~~~~---~~~~~~~~ 502 (507)
+|+++ .++..+.|
T Consensus 444 ~~~~~~~~~~~~~~~~ 459 (472)
T 3iwa_A 444 ASAMDIVNVAGNVADN 459 (472)
T ss_dssp ---CCHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHH
Confidence 99754 44444444
No 36
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.8e-56 Score=458.94 Aligned_cols=428 Identities=20% Similarity=0.239 Sum_probs=318.9
Q ss_pred cccccccceeeeeeccccccCCCCCCCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccc-cchhhhh
Q 010573 18 LSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALL 94 (507)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~~~ 94 (507)
..||..+|+.....+ .+...++||+|||||+||++||..|++. |.+|+|||+++..++. .| +|..
T Consensus 16 ~~np~~g~~~~~~~~-----~~~~~~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~----~~~~~~~--- 83 (480)
T 3cgb_A 16 TGGQQMGRTLYDDDD-----KDRWGSMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA----QCGLPYV--- 83 (480)
T ss_dssp --------------------------CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC----GGGHHHH---
T ss_pred cchhhhcccccCCCC-----cCccccceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC----CCCcchh---
Confidence 468888887422111 1111247999999999999999999996 8999999997665431 11 1100
Q ss_pred hhhHHHHHHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHH-HhCCcEEEEe-EEEEec--CCEEEEEc-cC
Q 010573 95 HSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKG-YGKFIS--PSEVSVDT-IE 169 (507)
Q Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~d--~~~~~v~~-~~ 169 (507)
+.... .++..+. ....+.+ +..+++++.+ .+..++ .+.+.+.. .+
T Consensus 84 ------------~~~~~-------~~~~~l~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~ 133 (480)
T 3cgb_A 84 ------------ISGAI-------ASTEKLI-----------ARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKT 133 (480)
T ss_dssp ------------HTTSS-------SCGGGGB-----------SSCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTT
T ss_pred ------------hcCCc-------CCHHHhh-----------hcCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCC
Confidence 00000 0011100 0001223 4558999886 556665 44555543 34
Q ss_pred CceEEEEeCeEEEccCCCCCC--CCCCccCCceEec---chhhccccC-----CCCeEEEEcCcHHHHHHHHHHHhcCCe
Q 010573 170 GGNTVVKGKNIIIATGSDVKS--LPGITIDEKRIVS---STGALALNE-----VPKKLVVIGAGYIGLEMGSVWARLGSE 239 (507)
Q Consensus 170 g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~~~~~~---~~~~~~~~~-----~~~~vvVvG~G~~g~e~A~~l~~~g~~ 239 (507)
|+..++.||+||+|||++|.. +||... ..+++ .+++..+.. .+++++|||+|++|+|+|..+.+.|.+
T Consensus 134 g~~~~~~~d~lviAtG~~p~~p~i~G~~~--~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~ 211 (480)
T 3cgb_A 134 KDVFEFSYDRLLIATGVRPVMPEWEGRDL--QGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKK 211 (480)
T ss_dssp CCEEEEECSEEEECCCEEECCCCCBTTTS--BTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCE
T ss_pred CceEEEEcCEEEECCCCcccCCCCCCccC--CCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCe
Confidence 643479999999999998853 445432 33443 445544433 689999999999999999999999999
Q ss_pred eEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 240 VTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 240 Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
|+++++.+.+++.+++++.+.+.+.+++.||+++++++|++++.+++...+.+ ++.++++|.||+|+|++|+++
T Consensus 212 Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~------~~~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 212 VRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVET------DKGTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEE------TTEEEECSEEEECSCEEESCG
T ss_pred EEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEE------CCCEEEcCEEEECcCCCcChH
Confidence 99999999999999999999999999999999999999999986532223443 235899999999999999988
Q ss_pred CCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCC----------CCcHhHHHHHHHHHHHHHcCCCCCC-CCCCc
Q 010573 320 GLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKV 388 (507)
Q Consensus 320 ~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~ 388 (507)
+ ++..|++++++|+|.||+++||+.|+|||+|||+.. +++++.|..||++||.||++....+ .+..+
T Consensus 286 ~--l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~ 363 (480)
T 3cgb_A 286 F--LEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGT 363 (480)
T ss_dssp G--GTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCC
T ss_pred H--HHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccce
Confidence 6 577889998889999999999999999999999942 2579999999999999999865443 35568
Q ss_pred cEEEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhc-CCcceEEEEEEECCCCeEEEEEEECCC-hHHHHHHH
Q 010573 389 PGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEA 466 (507)
Q Consensus 389 p~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~ilG~~~~g~~-~~~~~~~~ 466 (507)
|++.|++|+++++|+++++++..|+++.+..+.. ..++... .++.+|+|+++++++++|+|++++|+. +.|+|+.+
T Consensus 364 ~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~ 441 (480)
T 3cgb_A 364 GIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDS--TNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVI 441 (480)
T ss_dssp EEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEE--ESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHH
T ss_pred eEEEECCcEEEEeCCCHHHHHHcCCceEEEEEec--CCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHH
Confidence 9999999999999999999999999998877554 3333333 456789999999889999999999998 99999999
Q ss_pred HHHHHCCCCHHHHhcC-cCCCCChHHHHHHHHHH
Q 010573 467 VLAINYDASSEDIARV-CHAHPTMSEALKEAAMA 499 (507)
Q Consensus 467 ~~~i~~~~~~~~l~~~-~~~~p~~~~~~~~~~~~ 499 (507)
+.+|++++|+++|.++ +++|||++|++..+..+
T Consensus 442 ~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 475 (480)
T 3cgb_A 442 AMALFNKMSIHDLEDVDLSYAPPYNSVWDPIQQA 475 (480)
T ss_dssp HHHHHTTCBGGGGGGCCCCCCTTTCCSSCHHHHH
T ss_pred HHHHHcCCCHHHHhhcccccCCCCCCchhHHHHH
Confidence 9999999999999997 56899999987666443
No 37
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.6e-56 Score=456.61 Aligned_cols=413 Identities=17% Similarity=0.209 Sum_probs=319.2
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
|||+|||||+||++||..|++. |.+|+|||+++.++. .+| ... .. +. ..+. ..++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~----~~~---~~~-------~~----~~-g~~~----~~~~ 57 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF----LSC---GIA-------LY----LG-KEIK----NNDP 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB----CGG---GHH-------HH----HT-TCBG----GGCG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc----ccc---cch-------hh----hc-CCcc----cCCH
Confidence 5899999999999999999998 999999999765542 112 000 00 00 0000 0001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEc-cCCceEEEEeCeEEEccCCCCCC--CCCCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDT-IEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~-~~g~~~~~~~d~lvlAtG~~p~~--~pg~~ 195 (507)
..+ .....+++++.+++++.+. +..++ .+.+.+.. .+++...+.||+||+|||++|.. +||..
T Consensus 58 ~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~ 126 (452)
T 2cdu_A 58 RGL-----------FYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGID 126 (452)
T ss_dssp GGG-----------BSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTT
T ss_pred HHh-----------hhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCC
Confidence 100 0011244566799997775 66665 44555543 22334789999999999998853 44543
Q ss_pred cCCceEecch------hhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhc
Q 010573 196 IDEKRIVSST------GALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQ 268 (507)
Q Consensus 196 ~~~~~~~~~~------~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~ 268 (507)
. ..+++.. ++......+++++|||+|++|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.+++.
T Consensus 127 ~--~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 204 (452)
T 2cdu_A 127 S--SRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAH 204 (452)
T ss_dssp S--TTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred C--CCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHC
Confidence 2 2344332 2333345689999999999999999999999999999999999988 79999999999999999
Q ss_pred CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCC
Q 010573 269 KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPG 348 (507)
Q Consensus 269 Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~ 348 (507)
||+++++++|++++.+++++..... +++++++|.||+|+|++|++++ ++.. ++++++|+|.||+++||+.|+
T Consensus 205 Gv~i~~~~~v~~i~~~~~~v~~v~~-----~g~~i~~D~vv~a~G~~p~~~l--l~~~-l~~~~~G~i~Vd~~~~t~~~~ 276 (452)
T 2cdu_A 205 GVNLVLGSKVAAFEEVDDEIITKTL-----DGKEIKSDIAILCIGFRPNTEL--LKGK-VAMLDNGAIITDEYMHSSNRD 276 (452)
T ss_dssp TCEEEESSCEEEEEEETTEEEEEET-----TSCEEEESEEEECCCEEECCGG--GTTT-SCBCTTSCBCCCTTSBCSSTT
T ss_pred CCEEEcCCeeEEEEcCCCeEEEEEe-----CCCEEECCEEEECcCCCCCHHH--HHHh-hhcCCCCCEEECCCcCcCCCC
Confidence 9999999999999875565542221 3468999999999999999986 5666 888888999999999999999
Q ss_pred eEEecCCCCC----------CCcHhHHHHHHHHHHHHHcCCCCCC-CCCCccEEEEcCCCeeeecCCHHHHHHcCCCEEE
Q 010573 349 VYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRV 417 (507)
Q Consensus 349 IyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 417 (507)
|||+|||++. +.+++.|.+||+.||+||++..... .+...|+..+++|+++++|+++.+++..|+++.+
T Consensus 277 IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~ 356 (452)
T 2cdu_A 277 IFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSE 356 (452)
T ss_dssp EEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEE
T ss_pred EEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEE
Confidence 9999999963 3689999999999999999865332 2345677788899999999999999999999887
Q ss_pred EEEecCcccchhhc-CCcceEEEEEEECCCCeEEEEEEECC-ChHHHHHHHHHHHHCCCCHHHHhcC-cCCCCChHHHHH
Q 010573 418 GKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAP-NAGELIHEAVLAINYDASSEDIARV-CHAHPTMSEALK 494 (507)
Q Consensus 418 ~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~ilG~~~~g~-~~~~~~~~~~~~i~~~~~~~~l~~~-~~~~p~~~~~~~ 494 (507)
.. +....++.++ .++.+++|+++++++++|+|+|++|+ ++.|+|+.++.+|++++|+++|..+ +++|||++|.+.
T Consensus 357 ~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~ 434 (452)
T 2cdu_A 357 VI--IADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFN 434 (452)
T ss_dssp EE--EEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSC
T ss_pred EE--EecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHH
Confidence 74 4455666665 35679999999988999999999999 8999999999999999999999987 799999999744
Q ss_pred H---HHHHhcc
Q 010573 495 E---AAMATHD 502 (507)
Q Consensus 495 ~---~~~~~~~ 502 (507)
. ++..+.+
T Consensus 435 ~~~~aa~~~~~ 445 (452)
T 2cdu_A 435 YLNILGQAAQA 445 (452)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 4 4554444
No 38
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.4e-56 Score=460.99 Aligned_cols=409 Identities=22% Similarity=0.296 Sum_probs=316.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC---CcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG---LKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g---~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (507)
.+||+|||||+||++||..|++.| .+|+|||+++.++. .+| +|. .+...-.......
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~~ 95 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF----LGAGMAL---------------WIGEQIAGPEGLF 95 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB----CGGGHHH---------------HHTTSSSCSGGGB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc----cccccch---------------hhcCccCCHHHhh
Confidence 489999999999999999999987 99999999765542 122 100 0000000011111
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEcc-CCceEEEEeCeEEEccCCCCCC--CCCC
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTI-EGGNTVVKGKNIIIATGSDVKS--LPGI 194 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~-~g~~~~~~~d~lvlAtG~~p~~--~pg~ 194 (507)
.. ..+.+++.+++++.+. +..++.....+.+. +++..++.||+||||||++|.. +||.
T Consensus 96 ~~------------------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~ 157 (490)
T 2bc0_A 96 YS------------------DKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGA 157 (490)
T ss_dssp SC------------------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTC
T ss_pred hc------------------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCc
Confidence 11 1234556789987664 66666433333333 4434689999999999998853 4554
Q ss_pred cc-------C--CceEecch------hhcccc--CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHH
Q 010573 195 TI-------D--EKRIVSST------GALALN--EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGE 256 (507)
Q Consensus 195 ~~-------~--~~~~~~~~------~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~ 256 (507)
.. . ...+++.. ++.... ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .++++
T Consensus 158 ~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 237 (490)
T 2bc0_A 158 EIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRD 237 (490)
T ss_dssp CBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHH
T ss_pred cccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHH
Confidence 30 0 22344432 222333 5689999999999999999999999999999999999988 79999
Q ss_pred HHHHHHHHHHhcCcEEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCC
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGR 335 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~ 335 (507)
+.+.+.+.+++.||+++++++|++++.+ +.+ .+.+ +++++++|.||+|+|++|++++ ++.. ++++++|+
T Consensus 238 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~v~~v~~------~g~~i~~D~Vi~a~G~~p~~~l--l~~~-l~~~~~G~ 307 (490)
T 2bc0_A 238 LTDLMAKNMEEHGIQLAFGETVKEVAGN-GKVEKIIT------DKNEYDVDMVILAVGFRPNTTL--GNGK-IDLFRNGA 307 (490)
T ss_dssp HHHHHHHHHHTTTCEEEETCCEEEEECS-SSCCEEEE------SSCEEECSEEEECCCEEECCGG--GTTC-SCBCTTSC
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEcC-CcEEEEEE------CCcEEECCEEEECCCCCcChHH--HHhh-hccCCCCC
Confidence 9999999999999999999999999863 333 2443 3468999999999999999986 4555 78888899
Q ss_pred eecCCCCCCCCCCeEEecCCCCC----------CCcHhHHHHHHHHHHHHHcCCCCCC-CCCCccEEEEcCCCeeeecCC
Q 010573 336 IPVNERFATNIPGVYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKT 404 (507)
Q Consensus 336 i~Vd~~~~t~~~~IyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~p~~~~~~~~~~~vG~~ 404 (507)
|.||+++||+.|+|||+|||+.. +.+++.|.+||++||.||++..... .+...++..+++|+++++|++
T Consensus 308 I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~ 387 (490)
T 2bc0_A 308 FLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLT 387 (490)
T ss_dssp BCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECC
T ss_pred EEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcEeEEeeCC
Confidence 99999999999999999999963 3689999999999999999865322 233456666778999999999
Q ss_pred HHHHHHcCCCEEEEEEecCcccchhhcC--CcceEEEEEEECCCCeEEEEEEECC-ChHHHHHHHHHHHHCCCCHHHHhc
Q 010573 405 EEQVKELGVEYRVGKFPFLANSRAKAID--DAEGIVKILAEKETDKILGVHIMAP-NAGELIHEAVLAINYDASSEDIAR 481 (507)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~k~~~~~~~~~ilG~~~~g~-~~~~~~~~~~~~i~~~~~~~~l~~ 481 (507)
+++++..|+++.+.. +....++.+.+ ++.+++|+++++++++|+|+|++|+ ++.|+|+.++.+|++++|+++|..
T Consensus 388 ~~~a~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~ 465 (490)
T 2bc0_A 388 LEKAKRLGFDAAVTE--YTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLAL 465 (490)
T ss_dssp HHHHHHTTCCEEEEE--EEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHH
T ss_pred HHHHHHcCCceEEEE--EecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhh
Confidence 999999999988773 45556666654 5679999999988999999999999 899999999999999999999998
Q ss_pred C-cCCCCChHHHHHHHHHHh
Q 010573 482 V-CHAHPTMSEALKEAAMAT 500 (507)
Q Consensus 482 ~-~~~~p~~~~~~~~~~~~~ 500 (507)
+ +++|||++|.+..+..++
T Consensus 466 ~~~~~~Pt~~e~~~~~~~~~ 485 (490)
T 2bc0_A 466 TDIFFLPHFNKPYNYITMAA 485 (490)
T ss_dssp SCCCCCTTTCCTTCHHHHHH
T ss_pred cceecCCCCCchhHHHHHHH
Confidence 7 799999999876665443
No 39
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=5.2e-57 Score=475.05 Aligned_cols=422 Identities=21% Similarity=0.312 Sum_probs=314.1
Q ss_pred cccccccceeeeeeccccccCCCCCCCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccc-cchhhhh
Q 010573 18 LSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALL 94 (507)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~~~ 94 (507)
..||.++++..... ..+.+.++||+|||||+||++||.+|++. |++|+|||+++.++.. .| +|.
T Consensus 16 ~~np~~g~e~~~~~-----~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~----~~~lp~---- 82 (588)
T 3ics_A 16 TGGQQMGRTLYDDD-----DKDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFA----NCGLPY---- 82 (588)
T ss_dssp -----------------------CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC----GGGHHH----
T ss_pred ccchhcCccccCcc-----cCCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcccc----CCCCch----
Confidence 36888888866432 22334457999999999999999999998 8999999998766521 11 110
Q ss_pred hhhHHHHHHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCC--EEEEEc-cCC
Q 010573 95 HSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS--EVSVDT-IEG 170 (507)
Q Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~--~~~v~~-~~g 170 (507)
. +.......... +...++.+.++.++++..+ .+..++.. .+.+.. .+|
T Consensus 83 -------~----~~g~~~~~~~~-----------------~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g 134 (588)
T 3ics_A 83 -------Y----IGGVITERQKL-----------------LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTN 134 (588)
T ss_dssp -------H----HTTSSCCGGGG-----------------BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTC
T ss_pred -------h----hcCcCCChHHh-----------------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCC
Confidence 0 00000000000 0111234455778998765 56666544 444432 355
Q ss_pred ceEEEEeCeEEEccCCCCC--CCCCCccCCceEecchhhccc--------cCCCCeEEEEcCcHHHHHHHHHHHhcCCee
Q 010573 171 GNTVVKGKNIIIATGSDVK--SLPGITIDEKRIVSSTGALAL--------NEVPKKLVVIGAGYIGLEMGSVWARLGSEV 240 (507)
Q Consensus 171 ~~~~~~~d~lvlAtG~~p~--~~pg~~~~~~~~~~~~~~~~~--------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V 240 (507)
+...+.||+||+|||++|. .+||.. +...+++..+.... ...+++++|||+|.+|+|+|..+.+.|.+|
T Consensus 135 ~~~~~~~d~lviAtG~~p~~p~i~G~~-~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~V 213 (588)
T 3ics_A 135 ETYNEAYDVLILSPGAKPIVPSIPGIE-EAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEV 213 (588)
T ss_dssp CEEEEECSEEEECCCEEECCCCCTTTT-TCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEeCCEEEECCCCCCCCCCCCCcc-cCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeE
Confidence 4568999999999999875 445552 23345554433222 245899999999999999999999999999
Q ss_pred EEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 241 TVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 241 tlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+++++.+++++.+++++.+.+.+.+++.||+++++++|++++.++++ +++. +++++++|.||+|+|++|++++
T Consensus 214 tlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~-----~g~~i~~D~Vi~a~G~~p~~~~ 286 (588)
T 3ics_A 214 TLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLK-----SGSVIQTDMLILAIGVQPESSL 286 (588)
T ss_dssp EEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEET-----TSCEEECSEEEECSCEEECCHH
T ss_pred EEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEEC-----CCCEEEcCEEEEccCCCCChHH
Confidence 99999999999999999999999999999999999999999866554 4443 4568999999999999999976
Q ss_pred CCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC-------C---CCcHhHHHHHHHHHHHHHcC-CCCCCCCCCcc
Q 010573 321 LGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-------G---PMLAHKAEEDGVACVEFLAG-KHGHVDYDKVP 389 (507)
Q Consensus 321 l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~-------~---~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p 389 (507)
++..|++++++|+|.||+++||++|+|||+|||+. . +.+++.|..||++||+||+| ..... ...+|
T Consensus 287 --l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~-~~~~~ 363 (588)
T 3ics_A 287 --AKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLY-KGTLG 363 (588)
T ss_dssp --HHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCC-CCBCC
T ss_pred --HHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCcccc-CCccc
Confidence 67889999989999999999999999999999993 2 45899999999999999998 54322 22333
Q ss_pred E--EEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECC-ChHHHHHHH
Q 010573 390 G--VVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAP-NAGELIHEA 466 (507)
Q Consensus 390 ~--~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~-~~~~~~~~~ 466 (507)
+ +.|++|++++||+||++|++.|+++.+..++..... ....+++.||+|+++|+++++|||+|++|+ .+.|+|+.+
T Consensus 364 ~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~ 442 (588)
T 3ics_A 364 TSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHA-GYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVI 442 (588)
T ss_dssp CEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSC-TTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHH
T ss_pred ceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCcc-ccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHH
Confidence 3 458899999999999999999999998886533221 234456789999999999999999999998 489999999
Q ss_pred HHHHHCCCCHHHHhcCcCCC-CChHHH
Q 010573 467 VLAINYDASSEDIARVCHAH-PTMSEA 492 (507)
Q Consensus 467 ~~~i~~~~~~~~l~~~~~~~-p~~~~~ 492 (507)
++||++++|++||.+++++| |++++.
T Consensus 443 ~~ai~~~~t~~~l~~~~~~~~P~~~~~ 469 (588)
T 3ics_A 443 ATAIKANLTVLDLPDLELSYAPPYSSA 469 (588)
T ss_dssp HHHHHTTCBTTTGGGCCCCCSTTTCCS
T ss_pred HHHHHcCCCHHHhhhhhhccCCCcccc
Confidence 99999999999999999887 987754
No 40
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=6.8e-56 Score=451.29 Aligned_cols=404 Identities=24% Similarity=0.302 Sum_probs=315.1
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+||+|||||+||++||..|++. |++|+|||+++.+|. .+| +|. .+............
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~~~- 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF----LSAGMQL---------------YLEGKVKDVNSVRY- 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB----CGGGHHH---------------HHTTSSCCGGGSBS-
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc----ccccchh---------------hhcCccCCHHHhhc-
Confidence 4899999999999999999998 899999999766542 122 110 00000000111110
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEc-cCCceEEEEeCeEEEccCCCCCC--CCCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDT-IEGGNTVVKGKNIIIATGSDVKS--LPGI 194 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~-~~g~~~~~~~d~lvlAtG~~p~~--~pg~ 194 (507)
...+++++.+++++.+. +..++ .+.+.+.. .+|+..++.||+||||||++|.. +||.
T Consensus 61 -----------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~ 123 (447)
T 1nhp_A 61 -----------------MTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGK 123 (447)
T ss_dssp -----------------CCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTT
T ss_pred -----------------CCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCC
Confidence 11234556789997764 44554 44555543 33544569999999999998853 4554
Q ss_pred ccCCceEecch---hhcccc---C--CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHH
Q 010573 195 TIDEKRIVSST---GALALN---E--VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSL 265 (507)
Q Consensus 195 ~~~~~~~~~~~---~~~~~~---~--~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l 265 (507)
. ...+++.. +...+. . .+++++|||+|++|+|+|..+++.|.+|+++++.+.+++ .+++++.+.+.+.+
T Consensus 124 ~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 201 (447)
T 1nhp_A 124 D--LDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201 (447)
T ss_dssp T--SBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHH
T ss_pred C--CCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHH
Confidence 3 23455543 332221 2 689999999999999999999999999999999998888 68999999999999
Q ss_pred HhcCcEEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCC
Q 010573 266 EKQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFAT 344 (507)
Q Consensus 266 ~~~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t 344 (507)
++.||+++++++|++++.+ +.+ .+.+ ++.++++|.|++|+|++|++.+ ++.. ++++++|+|.||+++||
T Consensus 202 ~~~gv~i~~~~~v~~i~~~-~~v~~v~~------~~~~i~~d~vi~a~G~~p~~~~--~~~~-~~~~~~G~i~Vd~~~~t 271 (447)
T 1nhp_A 202 EANNITIATGETVERYEGD-GRVQKVVT------DKNAYDADLVVVAVGVRPNTAW--LKGT-LELHPNGLIKTDEYMRT 271 (447)
T ss_dssp HTTTEEEEESCCEEEEECS-SBCCEEEE------SSCEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCCTTCBC
T ss_pred HhCCCEEEcCCEEEEEEcc-CcEEEEEE------CCCEEECCEEEECcCCCCChHH--HHhh-hhhcCCCcEEECccccC
Confidence 9999999999999999865 333 3443 2357999999999999999986 4555 77888899999999999
Q ss_pred CCCCeEEecCCCCC----------CCcHhHHHHHHHHHHHHHcCCCCCC-CCCCccEEEEcCCCeeeecCCHHHHHHcCC
Q 010573 345 NIPGVYAIGDVIPG----------PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKELGV 413 (507)
Q Consensus 345 ~~~~IyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~p~~~~~~~~~~~vG~~~~~~~~~~~ 413 (507)
+.|+|||+|||+.. +.+++.|.+||+.||.||++...+. .+...|+..|++|+++++|+++++++..|+
T Consensus 272 ~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 351 (447)
T 1nhp_A 272 SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGK 351 (447)
T ss_dssp SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTC
T ss_pred CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCC
Confidence 99999999999962 3689999999999999999865332 345678899999999999999999999999
Q ss_pred CEEEEEEecCcccchhhc-CCcceEEEEEEECCCCeEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHhcC-cCCCCChH
Q 010573 414 EYRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPN-AGELIHEAVLAINYDASSEDIARV-CHAHPTMS 490 (507)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~ilG~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~~-~~~~p~~~ 490 (507)
++.+.. +....++.+. +++.+|+|+++++++++|+|+|++|++ +.|+|+.++.+|++++|+++|.++ +++|||++
T Consensus 352 ~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~ 429 (447)
T 1nhp_A 352 ETKAVT--VVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFD 429 (447)
T ss_dssp CCEEEE--EEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTC
T ss_pred ceEEEE--EEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCC
Confidence 987765 3445555555 456799999999889999999999998 999999999999999999999997 68999999
Q ss_pred HHHHHHHH
Q 010573 491 EALKEAAM 498 (507)
Q Consensus 491 ~~~~~~~~ 498 (507)
|++..+..
T Consensus 430 e~~~~~~~ 437 (447)
T 1nhp_A 430 KPWNIINT 437 (447)
T ss_dssp CSSCHHHH
T ss_pred CcccHHHH
Confidence 97655543
No 41
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.3e-55 Score=463.15 Aligned_cols=402 Identities=21% Similarity=0.301 Sum_probs=313.3
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccc-cchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGC-IPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+||+|||||+||++||.+|++. +++|+|||+++.++.. .| +|. . +.............
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~----~~~l~~-----------~----~~~~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA----NCGLPY-----------H----ISGEIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC----GGGHHH-----------H----HTSSSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc----ccCchH-----------H----hcCCcCChHHhhcc
Confidence 5899999999999999999998 7999999998766521 01 110 0 00000000000111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEc---cCCceEEEEeCeEEEccCCCCC--CCCCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDT---IEGGNTVVKGKNIIIATGSDVK--SLPGI 194 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~---~~g~~~~~~~d~lvlAtG~~p~--~~pg~ 194 (507)
. ...+.++.+++++.+ ++..++.....+.+ .+|+..++.||+||||||++|. .+||.
T Consensus 63 ~-----------------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~ 125 (565)
T 3ntd_A 63 T-----------------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGV 125 (565)
T ss_dssp C-----------------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTC
T ss_pred C-----------------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCC
Confidence 1 122333468888654 56666654433333 3355568999999999999875 34554
Q ss_pred ccCCceEecchhh---cccc-----CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHH
Q 010573 195 TIDEKRIVSSTGA---LALN-----EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLE 266 (507)
Q Consensus 195 ~~~~~~~~~~~~~---~~~~-----~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~ 266 (507)
. ...+++..++ ..+. ..+++++|||+|.+|+|+|..+.+.|.+|+++++.+++++.+++++.+.+.+.++
T Consensus 126 ~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 203 (565)
T 3ntd_A 126 D--NPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIR 203 (565)
T ss_dssp C--STTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHH
T ss_pred C--CCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHH
Confidence 3 3334444332 2222 4589999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEEEcCceEEEEEE-------------------cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccC
Q 010573 267 KQKMKFMLKTKVVGVDL-------------------SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIG 327 (507)
Q Consensus 267 ~~Gv~i~~~~~v~~i~~-------------------~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~g 327 (507)
+.||++++++.+++++. .++++.+.+. +++++++|.||+|+|++|++.+ ++..|
T Consensus 204 ~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~g~~i~~D~vi~a~G~~p~~~l--~~~~g 276 (565)
T 3ntd_A 204 DQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLS-----NGELLETDLLIMAIGVRPETQL--ARDAG 276 (565)
T ss_dssp HTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEET-----TSCEEEESEEEECSCEEECCHH--HHHHT
T ss_pred HCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEc-----CCCEEEcCEEEECcCCccchHH--HHhCC
Confidence 99999999999999987 3566666653 4568999999999999999885 57788
Q ss_pred ceecCCCCeecCCCCCCCCCCeEEecCCCC-------C---CCcHhHHHHHHHHHHHHHcCCCCCCCC-CCccEEEEcCC
Q 010573 328 VETDKMGRIPVNERFATNIPGVYAIGDVIP-------G---PMLAHKAEEDGVACVEFLAGKHGHVDY-DKVPGVVYTHP 396 (507)
Q Consensus 328 l~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~-------~---~~~~~~A~~~g~~aa~~i~~~~~~~~~-~~~p~~~~~~~ 396 (507)
++++++|+|.||+++||+.|+|||+|||+. . +.+++.|..||+.||+||+|+...+.. ...+.+.|++|
T Consensus 277 ~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~ 356 (565)
T 3ntd_A 277 LAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDL 356 (565)
T ss_dssp CCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTE
T ss_pred cccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCc
Confidence 999999999999999999999999999983 2 247999999999999999987644322 22345668899
Q ss_pred CeeeecCCHHHHHHcCCCEEEEEEecCcccchhhc-CCcceEEEEEEECCCCeEEEEEEECCCh-HHHHHHHHHHHHCCC
Q 010573 397 EVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAI-DDAEGIVKILAEKETDKILGVHIMAPNA-GELIHEAVLAINYDA 474 (507)
Q Consensus 397 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~ilG~~~~g~~~-~~~~~~~~~~i~~~~ 474 (507)
+++++|++|++|++.|+++.+..+. ...++.++ +++.+|+|+++|+++++|||+|++|+++ .|+|+.+++||++++
T Consensus 357 ~~~~vG~~e~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~ 434 (565)
T 3ntd_A 357 AVGATGKNEKQLKQAGIAFEKVYVH--TASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGM 434 (565)
T ss_dssp EEEEEECCHHHHHHTTCCCEEEEEE--EESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTC
T ss_pred EEEEecCCHHHHHHcCCCeEEEEEe--cCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCC
Confidence 9999999999999999998876643 44555565 5678999999999999999999999998 899999999999999
Q ss_pred CHHHHhcCcCC-CCChHHH
Q 010573 475 SSEDIARVCHA-HPTMSEA 492 (507)
Q Consensus 475 ~~~~l~~~~~~-~p~~~~~ 492 (507)
|++||.++++. ||++++.
T Consensus 435 ~~~~l~~~~~~~~P~~~~~ 453 (565)
T 3ntd_A 435 TVEQLQHLELSYAPPYGSA 453 (565)
T ss_dssp BHHHHTTCCCCCCTTTCCS
T ss_pred CHHHHhhhhhccCcccCch
Confidence 99999999854 6888754
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=8.3e-48 Score=384.04 Aligned_cols=359 Identities=19% Similarity=0.273 Sum_probs=273.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
.++||+|||||+||++||..|++.| .+|+|+|++. +|.|++.++... +. .+.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~---------g~~~~~~~l~~~---------~~-~~~------- 56 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD---------GRSYSKPMLSTG---------FS-KNK------- 56 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC---------CCEECGGGGGGT---------TT-TTC-------
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC---------CCccCcccccHH---------Hh-CCC-------
Confidence 4589999999999999999999998 5699999853 344444322111 00 000
Q ss_pred ChHHHHHHHHHHHHHHH-HHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccC
Q 010573 120 DLPAMMAQKDKAVSNLT-RGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITID 197 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~ 197 (507)
.. ..+. .....++++.+++++.+ .+..++.....+.+.+ ..+.||+||+|||++|..++....+
T Consensus 57 ~~-----------~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~~~~d~lviAtG~~p~~p~i~g~~ 122 (384)
T 2v3a_A 57 DA-----------DGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGE---EEVRYRDLVLAWGAEPIRVPVEGDA 122 (384)
T ss_dssp CH-----------HHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETT---EEEECSEEEECCCEEECCCCCBSTT
T ss_pred CH-----------HHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECC---cEEECCEEEEeCCCCcCCCCCCCcC
Confidence 00 1111 12244566789998876 4566665434454443 4699999999999988643322222
Q ss_pred CceEecchhhcccc------CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-CCHHHHHHHHHHHHhcCc
Q 010573 198 EKRIVSSTGALALN------EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 198 ~~~~~~~~~~~~~~------~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-~d~~~~~~~~~~l~~~Gv 270 (507)
...+++..+...+. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.+++.||
T Consensus 123 ~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv 202 (384)
T 2v3a_A 123 QDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGV 202 (384)
T ss_dssp TTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTC
T ss_pred cCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCC
Confidence 23466665544322 23899999999999999999999999999999999988876 589999999999999999
Q ss_pred EEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
+++++++|++++.+++++.+++. +++++++|.||+|+|++|++++ ++..|++++ +| |.||+++||+.|+||
T Consensus 203 ~i~~~~~v~~i~~~~~~~~v~~~-----~g~~i~~d~vv~a~G~~p~~~l--~~~~g~~~~-~g-i~vd~~~~t~~~~Iy 273 (384)
T 2v3a_A 203 RFHLGPVLASLKKAGEGLEAHLS-----DGEVIPCDLVVSAVGLRPRTEL--AFAAGLAVN-RG-IVVDRSLRTSHANIY 273 (384)
T ss_dssp EEEESCCEEEEEEETTEEEEEET-----TSCEEEESEEEECSCEEECCHH--HHHTTCCBS-SS-EEECTTCBCSSTTEE
T ss_pred EEEeCCEEEEEEecCCEEEEEEC-----CCCEEECCEEEECcCCCcCHHH--HHHCCCCCC-CC-EEECCCCCCCCCCEE
Confidence 99999999999887777777764 4568999999999999999974 677888887 47 999999999999999
Q ss_pred EecCCCC--CC--CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcC-CCeeeecCCHHHHHHcCCCEEEEEEecCcc
Q 010573 351 AIGDVIP--GP--MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTH-PEVASVGKTEEQVKELGVEYRVGKFPFLAN 425 (507)
Q Consensus 351 A~GD~a~--~~--~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~ 425 (507)
|+|||+. .+ ..+..|..||+.+|+||+|...+++|..+|+++|+. +++..+|.+... .
T Consensus 274 A~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-----------------~ 336 (384)
T 2v3a_A 274 ALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGM-----------------D 336 (384)
T ss_dssp ECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECCTTSCEEEECCCTTC-----------------C
T ss_pred EeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCeeEEEecCCCCC-----------------C
Confidence 9999984 22 357789999999999999987778888999999987 588888876531 0
Q ss_pred cchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHH
Q 010573 426 SRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAV 467 (507)
Q Consensus 426 ~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~ 467 (507)
.++....++.+|.|++++ ++++|+|++++|+++.|+++.+.
T Consensus 337 ~~~~~~~~~~g~~~~~~~-~~~~i~G~~~~g~~a~e~~~~~~ 377 (384)
T 2v3a_A 337 GQWLVEGSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNK 377 (384)
T ss_dssp CEEEEEEETTEEEEEEEC-TTSCEEEEEEEGGGGGGHHHHHT
T ss_pred ceEEEEecCCcEEEEEEc-cCCEEEEEEEECcchHHHHHHHH
Confidence 111122345689999887 68999999999999999887664
No 43
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=4.6e-48 Score=384.00 Aligned_cols=361 Identities=19% Similarity=0.302 Sum_probs=280.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.+..+|+|||||+||++||..|++.+.+|+|||+++.++... ..+...+. ..........
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~--------------~~l~~~l~-----g~~~~~~l~~- 66 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR--------------PRLNEIIA-----KNKSIDDILI- 66 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG--------------GGHHHHHH-----SCCCGGGTBS-
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc--------------ChhhHHHc-----CCCCHHHccC-
Confidence 345799999999999999999977899999999987654310 00101000 0111111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~ 197 (507)
...+++++.+++++.+ ++..+|.+...|.+.+| .++.||+||||||++|.. +||..
T Consensus 67 -----------------~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~~~yd~lvlAtG~~p~~p~i~G~~-- 125 (385)
T 3klj_A 67 -----------------KKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSG--EKIKYEKLIIASGSIANKIKVPHAD-- 125 (385)
T ss_dssp -----------------SCHHHHHHTTCEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTCS--
T ss_pred -----------------CCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEecCCCcCCCCCCCCC--
Confidence 1235667789999988 58888887778888888 689999999999998854 44543
Q ss_pred CceEec---chhhccccC---CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-CCHHHHHHHHHHHHhcCc
Q 010573 198 EKRIVS---STGALALNE---VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 198 ~~~~~~---~~~~~~~~~---~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-~d~~~~~~~~~~l~~~Gv 270 (507)
.+++ .+++..+.. .+++++|||+|.+|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||
T Consensus 126 --~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 203 (385)
T 3klj_A 126 --EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGI 203 (385)
T ss_dssp --CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTC
T ss_pred --CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCC
Confidence 3443 445444433 2799999999999999999999999999999999999875 899999999999999999
Q ss_pred EEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
++++++.++++ ++++++|.||+|+|++|++++ ++.+|++.+ +| |.||+++||+.|+||
T Consensus 204 ~~~~~~~v~~i------------------g~~~~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g-i~vd~~~~t~~~~Iy 261 (385)
T 3klj_A 204 KIYTNSNFEEM------------------GDLIRSSCVITAVGVKPNLDF--IKDTEIASK-RG-ILVNDHMETSIKDIY 261 (385)
T ss_dssp EEECSCCGGGC------------------HHHHHHSEEEECCCEEECCGG--GTTSCCCBS-SS-EEECTTCBCSSTTEE
T ss_pred EEEeCCEEEEc------------------CeEEecCeEEECcCcccChhh--hhhcCCCcC-CC-EEECCCcccCCCCEE
Confidence 99999887665 246889999999999999987 577788876 34 999999999999999
Q ss_pred EecCCCC----CCCcHhHHHHHHHHHHHHHcCCCCCCCCCC-ccEEEE--cCCCeeeecCCHHHHHHcCCCEEEEEEecC
Q 010573 351 AIGDVIP----GPMLAHKAEEDGVACVEFLAGKHGHVDYDK-VPGVVY--THPEVASVGKTEEQVKELGVEYRVGKFPFL 423 (507)
Q Consensus 351 A~GD~a~----~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~-~p~~~~--~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~ 423 (507)
|+|||+. .+.++..|..||+.||.||+|.... |.. .|++++ ++++++++|+++.+. .+. +..
T Consensus 262 A~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~G~~~~~~----~~~-~~~---- 330 (385)
T 3klj_A 262 ACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDAS--YSEIIPSPILKVSGISIISCGDIENNK----PSK-VFR---- 330 (385)
T ss_dssp ECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCC--CCCCCCCCEEEETTEEEEEESCCTTCC----CSE-EEE----
T ss_pred EEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCCcC--CCCCCCcEEEEeCCCcEEEEcCCCCCC----CeE-EEE----
Confidence 9999996 3668999999999999999987643 443 466554 788999999998641 111 110
Q ss_pred cccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHH
Q 010573 424 ANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 495 (507)
Q Consensus 424 ~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~~~~~~~~ 495 (507)
..+..+|.|+++ ++|+|+|++++|+.+... .+..+|+++.++++| ||++|+|.+
T Consensus 331 -------~~~~~~~~~~~~--~~~~l~g~~~~g~~~~~~--~~~~~i~~~~~~~~~-------~~~~E~~~~ 384 (385)
T 3klj_A 331 -------STQEDKYIVCML--KENKIDAAAVIGDVSLGT--KLKKAIDSSKSFDNI-------SSLDAILNN 384 (385)
T ss_dssp -------EECSSCEEEEEE--ETTEEEEEEEESCHHHHH--HHHHHHHTTCBCSCC-------SCHHHHHTT
T ss_pred -------ECCCCeEEEEEE--ECCEEEEEEEECCcHHHH--HHHHHHHcCCCcccc-------cCHHHHHhh
Confidence 123457999998 479999999999966554 689999999998888 999999864
No 44
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2e-46 Score=370.65 Aligned_cols=333 Identities=24% Similarity=0.339 Sum_probs=249.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
.|++|||||+||++||..|++.| +|+|||+++..+. ++.++. .. +. ..+.......
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~---------~~~~l~-----~~----~~-g~~~~~~~~~---- 64 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYY---------SKPMLS-----HY----IA-GFIPRNRLFP---- 64 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCC---------CSTTHH-----HH----HT-TSSCGGGGCS----
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcc---------ccchhH-----HH----Hh-CCCCHHHhcc----
Confidence 59999999999999999999999 9999999654321 010100 00 00 0011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCccCCceEe
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIV 202 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~ 202 (507)
...+++++.+++++.+ .+..+|++...|. .++ .++.||+||||||++|..++... ...++
T Consensus 65 --------------~~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~g--~~~~~d~lViATGs~p~~p~i~G--~~~v~ 125 (367)
T 1xhc_A 65 --------------YSLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TEK--GEVPYDTLVLATGARAREPQIKG--KEYLL 125 (367)
T ss_dssp --------------SCHHHHHHHTEEEECSCCEEEEETTTTEEE-ESS--CEEECSEEEECCCEEECCCCSBT--GGGEE
T ss_pred --------------CCHHHHHhCCcEEEECCEEEEEECCCCEEE-ECC--cEEECCEEEECCCCCCCCCCCCC--cCCEE
Confidence 1124456678999988 4788887766666 556 67999999999999885433211 22344
Q ss_pred cc---hhhccccC---CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 010573 203 SS---TGALALNE---VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 203 ~~---~~~~~~~~---~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
+. .++..+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ +++++.+.+.+.+++.||++++++
T Consensus 126 ~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~ 204 (367)
T 1xhc_A 126 TLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNS 204 (367)
T ss_dssp CCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSC
T ss_pred EEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCC
Confidence 43 44444322 258999999999999999999999999999999999988 999999999999999999999999
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCC
Q 010573 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a 356 (507)
++++++ .+. +++. +++ +++|.|++|+|++|++++ ++..|++.+ +| |.||+++||+.|+|||+|||+
T Consensus 205 ~v~~i~--~~~--v~~~-----~g~-i~~D~vi~a~G~~p~~~l--l~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~a 270 (367)
T 1xhc_A 205 ELLEAN--EEG--VLTN-----SGF-IEGKVKICAIGIVPNVDL--ARRSGIHTG-RG-ILIDDNFRTSAKDVYAIGDCA 270 (367)
T ss_dssp CEEEEC--SSE--EEET-----TEE-EECSCEEEECCEEECCHH--HHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGE
T ss_pred EEEEEE--eeE--EEEC-----CCE-EEcCEEEECcCCCcCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEEeEeee
Confidence 999996 333 4443 456 999999999999999984 677888876 34 999999999999999999998
Q ss_pred CC----CCcHhHHHHHHHHHHHHHcCCCCCCCCCCccE--EEEcCCCeeeecCCHHHHHHcCCCEEEEEEecCcccchhh
Q 010573 357 PG----PMLAHKAEEDGVACVEFLAGKHGHVDYDKVPG--VVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKA 430 (507)
Q Consensus 357 ~~----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (507)
.. +.+++.|.+||+.||.||++...++++ ..|. +.|++|+++++|+++.++. + +
T Consensus 271 ~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~~~~vG~~~~~~~----~-------~-------- 330 (367)
T 1xhc_A 271 EYSGIIAGTAKAAMEQARVLADILKGEPRRYNF-KFRSTVFKFGKLQIAIIGNTKGEGK----W-------I-------- 330 (367)
T ss_dssp EBTTBCCCSHHHHHHHHHHHHHHHTTCCCCCCS-SCCEEEEEETTEEEEEEECCSSCEE----E-------E--------
T ss_pred ecCCCCccHHHHHHHHHHHHHHHhcCCCccCCC-CCCceEEEECCceEEEECCCCCCCc----c-------c--------
Confidence 42 468999999999999999987644443 2343 4789999999999988421 1 0
Q ss_pred cCCcceEEEEEEECCCCeEEEEEEECCChH
Q 010573 431 IDDAEGIVKILAEKETDKILGVHIMAPNAG 460 (507)
Q Consensus 431 ~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~ 460 (507)
.+|+|++++ +++|+|++++|+.+.
T Consensus 331 ----~~~~k~~~~--~~~ilG~~~~g~~~~ 354 (367)
T 1xhc_A 331 ----EDNTKVFYE--NGKIIGAVVFNDIRK 354 (367)
T ss_dssp ----ETTEEEEC-------CEEEEESCHHH
T ss_pred ----ceEEEEEEE--CCEEEEEEEECChHH
Confidence 468999996 599999999998653
No 45
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=4.1e-44 Score=359.54 Aligned_cols=364 Identities=20% Similarity=0.254 Sum_probs=270.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..+||+|||||+||++||.+|++.|. +|+|||+++.++.. .+..++.+.. .. . .....+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~----~~~~~~~~~~-------------~~-~-~~~~~~ 66 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD----RPPLSKDFMA-------------HG-D-AEKIRL 66 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC----SGGGGTHHHH-------------HC-C-GGGSBC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCccc----CCCCCHHHhC-------------CC-c-hhhhhH
Confidence 45899999999999999999999987 59999997654321 1111111100 00 0 000000
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--C-CCCc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--L-PGIT 195 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~-pg~~ 195 (507)
. ++++.+++++.+. +..++.....|.+.+| ..+.||+||+|||++|.. + ||..
T Consensus 67 --------------------~-~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~~~~~~i~~G~~ 123 (408)
T 2gqw_A 67 --------------------D-CKRAPEVEWLLGVTAQSFDPQAHTVALSDG--RTLPYGTLVLATGAAPRALPTLQGAT 123 (408)
T ss_dssp --------------------C-CTTSCSCEEEETCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTCS
T ss_pred --------------------H-HHHHCCCEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCccCCCC
Confidence 0 3456789999985 7888876666777777 579999999999998853 3 5543
Q ss_pred cCCce-Eecchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCc
Q 010573 196 IDEKR-IVSSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 196 ~~~~~-~~~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv 270 (507)
.+.. +.+.+++..+. ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||
T Consensus 124 -~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV 202 (408)
T 2gqw_A 124 -MPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGV 202 (408)
T ss_dssp -SCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTC
T ss_pred -CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCc
Confidence 2221 23455554443 2379999999999999999999999999999999999887 5899999999999999999
Q ss_pred EEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
+++++++|++++ + + .+++. +++++++|.||+|+|++|++++ ++..|++++ +| |.||+++||+.|+||
T Consensus 203 ~i~~~~~v~~i~-~-~--~v~~~-----~g~~i~~D~vi~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~~t~~~~Iy 269 (408)
T 2gqw_A 203 DLRFERSVTGSV-D-G--VVLLD-----DGTRIAADMVVVGIGVLANDAL--ARAAGLACD-DG-IFVDAYGRTTCPDVY 269 (408)
T ss_dssp EEEESCCEEEEE-T-T--EEEET-----TSCEEECSEEEECSCEEECCHH--HHHHTCCBS-SS-EECCTTCBCSSTTEE
T ss_pred EEEeCCEEEEEE-C-C--EEEEC-----CCCEEEcCEEEECcCCCccHHH--HHhCCCCCC-CC-EEECCCCccCCCCEE
Confidence 999999999997 3 3 45553 4568999999999999999886 677788886 45 999999999999999
Q ss_pred EecCCCCCC----------CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEE--EcCCCeeeecCCHHHHHHcCCCEEEE
Q 010573 351 AIGDVIPGP----------MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVEYRVG 418 (507)
Q Consensus 351 A~GD~a~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~vG~~~~~~~~~~~~~~~~ 418 (507)
|+|||+..+ ..+..|..||+.||.||++... .+|..+|+++ +.+++++++|+ +. ..++.+
T Consensus 270 A~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~p~~~~~~~~~~~~~~G~-~~-----~~~~~~- 341 (408)
T 2gqw_A 270 ALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA-PGYAELPWYWSDQGALRIQVAGL-AS-----GDEEIV- 341 (408)
T ss_dssp ECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS-CCCCCCCEEEEEETTEEEEEEEC-SC-----CSEEEE-
T ss_pred EEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC-CcCCCCCeEEEEECCceEEEECC-CC-----CCEEEE-
Confidence 999999653 2678999999999999998754 2677788765 34578999998 21 111110
Q ss_pred EEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCH--HHHhc
Q 010573 419 KFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASS--EDIAR 481 (507)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~--~~l~~ 481 (507)
. . .......+|.+++++ +++|+|++++|+.+ .+..+..+|+.+.++ .+|.+
T Consensus 342 ~----~----~~~~~~~~~~~~~~~--~~~l~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~l~~ 394 (408)
T 2gqw_A 342 R----G----EVSLDAPKFTLIELQ--KGRIVGATCVNNAR--DFAPLRRLLAVGAKPDRAALAD 394 (408)
T ss_dssp E----S----CCCSSSCCEEEEEEE--TTEEEEEEEESCHH--HHHHHHHHHHTTCCCCHHHHHC
T ss_pred E----c----cCCCCCCeEEEEEEe--CCEEEEEEEECChH--HHHHHHHHHHCCCCCChHHhcC
Confidence 0 0 000114568777774 79999999999964 357799999998854 44443
No 46
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=2e-44 Score=364.26 Aligned_cols=379 Identities=19% Similarity=0.224 Sum_probs=280.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.+||+|||||+||++||..|++.|. +|+|||+++.+.... +..++.+.. ..........
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~----~~l~~~~~~--------------~~~~~~~~~~- 64 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHL----PPLSKAYLA--------------GKATAESLYL- 64 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCS----GGGGTTTTT--------------TCSCSGGGBS-
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcC----CCCcHHHhC--------------CCCChHHhcc-
Confidence 4799999999999999999999998 799999965432210 000110000 0000000001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~ 197 (507)
...+++++.+++++.+. +..++.....|.+.+| ..+.||+||+|||++|.. +||....
T Consensus 65 -----------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~p~~~~i~G~~~~ 125 (431)
T 1q1r_A 65 -----------------RTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDG--RALDYDRLVLATGGRPRPLPVASGAVG 125 (431)
T ss_dssp -----------------SCHHHHHHTTEEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTHHH
T ss_pred -----------------cCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEcCCCCccCCCCCCcccC
Confidence 01245567899999874 6777765556777777 679999999999998853 3454322
Q ss_pred C---ce-Eecchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcC
Q 010573 198 E---KR-IVSSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQK 269 (507)
Q Consensus 198 ~---~~-~~~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~G 269 (507)
+ .. +.+.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.|
T Consensus 126 ~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 205 (431)
T 1q1r_A 126 KANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAG 205 (431)
T ss_dssp HSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHT
T ss_pred CCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCC
Confidence 2 11 23455554443 3489999999999999999999999999999999998877 489999999999999999
Q ss_pred cEEEcCceEEEEEE--cCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCC
Q 010573 270 MKFMLKTKVVGVDL--SGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNI 346 (507)
Q Consensus 270 v~i~~~~~v~~i~~--~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~ 346 (507)
|++++++++++++. +++.+ .+++. +++++++|.||+|+|++|++++ ++..|++++ +| |.||+++||+.
T Consensus 206 V~i~~~~~v~~i~~~~~~~~v~~v~~~-----~G~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~~ts~ 276 (431)
T 1q1r_A 206 VDIRTGTQVCGFEMSTDQQKVTAVLCE-----DGTRLPADLVIAGIGLIPNCEL--ASAAGLQVD-NG-IVINEHMQTSD 276 (431)
T ss_dssp CEEECSCCEEEEEECTTTCCEEEEEET-----TSCEEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EECCTTSBCSS
T ss_pred eEEEeCCEEEEEEeccCCCcEEEEEeC-----CCCEEEcCEEEECCCCCcCcch--hhccCCCCC-CC-EEECCCcccCC
Confidence 99999999999987 44554 46654 4578999999999999999885 677888886 34 99999999999
Q ss_pred CCeEEecCCCCCCC----------cHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEE--cCCCeeeecCCHHHHHHcCCC
Q 010573 347 PGVYAIGDVIPGPM----------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVY--THPEVASVGKTEEQVKELGVE 414 (507)
Q Consensus 347 ~~IyA~GD~a~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~--~~~~~~~vG~~~~~~~~~~~~ 414 (507)
|+|||+|||+..+. .+..|..||+.||.||+|... .|..+|+++. .++++..+|+++.. .+
T Consensus 277 ~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~G~~~~~-----~~ 349 (431)
T 1q1r_A 277 PLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP--RDEAAPWFWSDQYEIGLKMVGLSEGY-----DR 349 (431)
T ss_dssp TTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC--CCCCCCEEEEEETTEEEEEEECCTTC-----SE
T ss_pred CCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC--CCCCCCeEEEEECCceEEEEeCCCCC-----CE
Confidence 99999999996532 578899999999999998753 5777888642 34678899987631 11
Q ss_pred EEEEEEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcCcCCCCC
Q 010573 415 YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPT 488 (507)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~p~ 488 (507)
+.+.. ..+...|.+++. ++++|+|++++|+.+.+.+.....+++.+++.++|.+..+....
T Consensus 350 ~~~~~-----------~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~ 410 (431)
T 1q1r_A 350 IIVRG-----------SLAQPDFSVFYL--QGDRVLAVDTVNRPVEFNQSKQIITDRLPVEPNLLGDESVPLKE 410 (431)
T ss_dssp EEEEE-----------ETTTTEEEEEEE--ETTEEEEEEEESCHHHHHHHHHHHHTTCCCCHHHHTCTTSCHHH
T ss_pred EEEEc-----------cCCCCeEEEEEE--eCCEEEEEEEECChHHHHHHHHHHHCCCCCCHHHhhCCCCCHHH
Confidence 11100 122345766654 57999999999998888887777777888899988877654433
No 47
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=7.4e-43 Score=351.92 Aligned_cols=370 Identities=21% Similarity=0.320 Sum_probs=275.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCc--EEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLK--TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~--V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
.++||+|||||+||++||.+|++.|++ |+|||+++.++..... + ++. +............
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~---l-~~~--------------~~~~~~~~~~~~~ 69 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPP---L-SKE--------------YLAREKTFERICI 69 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGG---G-GTT--------------TTTTSSCSGGGBS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCccc---C-CHH--------------HHcCCCCHHHhcc
Confidence 458999999999999999999999987 9999997765432100 0 000 0000000111111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCcc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITI 196 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~ 196 (507)
....++++.+++++.+ .+..++.....+.+.++ ..+.||+||+|||++|.. +|+...
T Consensus 70 ------------------~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~~ 129 (415)
T 3lxd_A 70 ------------------RPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDG--SAIEYGKLIWATGGDPRRLSCVGADL 129 (415)
T ss_dssp ------------------SCHHHHHHTTEEEEETCCEEEEETTTTEEEETTS--CEEEEEEEEECCCEECCCCBTTSSCC
T ss_pred ------------------CCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCC--CEEEeeEEEEccCCccCCCCCCCccc
Confidence 1135567789999998 78888888778888777 689999999999998854 455442
Q ss_pred CCce-Eecchhhcccc---CC-CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCc
Q 010573 197 DEKR-IVSSTGALALN---EV-PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 197 ~~~~-~~~~~~~~~~~---~~-~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv 270 (507)
.+.. +.+..++..+. .. +++++|||+|++|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||
T Consensus 130 ~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV 209 (415)
T 3lxd_A 130 AGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGV 209 (415)
T ss_dssp BTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTC
T ss_pred cCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCC
Confidence 2221 22444444332 23 89999999999999999999999999999999999877 5899999999999999999
Q ss_pred EEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCe
Q 010573 271 KFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~I 349 (507)
++++++.|++++.+++++ .+++. +++++++|.||+|+|++|++++ ++..|++.+ +| |.||++++|+.|+|
T Consensus 210 ~i~~~~~v~~i~~~~~~v~~v~l~-----dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~vd~~~~t~~~~i 280 (415)
T 3lxd_A 210 DLRTGAAMDCIEGDGTKVTGVRMQ-----DGSVIPADIVIVGIGIVPCVGA--LISAGASGG-NG-VDVDEFCRTSLTDV 280 (415)
T ss_dssp EEEETCCEEEEEESSSBEEEEEES-----SSCEEECSEEEECSCCEESCHH--HHHTTCCCS-SS-EECCTTCBCSSTTE
T ss_pred EEEECCEEEEEEecCCcEEEEEeC-----CCCEEEcCEEEECCCCccChHH--HHhCCCCcC-CC-EEECCCCCcCCCCE
Confidence 999999999998876665 46664 5678999999999999999976 677788887 34 99999999999999
Q ss_pred EEecCCCCCCC-----------cHhHHHHHHHHHHHHHcCCCCCCCCCCccEEE--EcCCCeeeecCCHHHHHHcCCCEE
Q 010573 350 YAIGDVIPGPM-----------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVEYR 416 (507)
Q Consensus 350 yA~GD~a~~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~vG~~~~~~~~~~~~~~ 416 (507)
||+|||+..+. .+..|..||+.||+||+|.. ..|..+|+++ +++..+..+|+++.. -++
T Consensus 281 yA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~-----~~~- 352 (415)
T 3lxd_A 281 YAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP--VPYKATPWFWSNQYDLKLQTVGLSTGH-----DNA- 352 (415)
T ss_dssp EECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC--CCCCCCCEEEEEETTEEEEEEECCTTC-----SEE-
T ss_pred EEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC--CCCCCCCeeEeeeCCcEEEEEeCCCCC-----CEE-
Confidence 99999996543 46899999999999999876 3577788754 345677888887531 111
Q ss_pred EEEEecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCC--HHHHh
Q 010573 417 VGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDAS--SEDIA 480 (507)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~--~~~l~ 480 (507)
+.. ...+...|.++++ ++++|+|+..+|+. .....+..+|+.+.+ .++|+
T Consensus 353 ~~~----------~~~~~~~~~~~~~--~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 404 (415)
T 3lxd_A 353 VLR----------GDPATRSFSVVYL--KGGKVVALDCVNMV--KDYVQGKKLVEARAQIAPEQLA 404 (415)
T ss_dssp EEE----------EEGGGTEEEEEEE--ETTEEEEEEEESCH--HHHHHHHHHHHHTCCCCHHHHT
T ss_pred EEE----------ecCCCCeEEEEEE--ECCEEEEEEEECCh--HHHHHHHHHHHCCCCCCHHHhc
Confidence 111 0112346888888 47999999999983 334557778876654 44454
No 48
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.8e-43 Score=355.26 Aligned_cols=368 Identities=21% Similarity=0.306 Sum_probs=273.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCc--EEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLK--TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~--V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+||+|||||+||++||..|++.|++ |+|||+++..+... |. + . ... .......... ...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~------~~--l-~-~~~--------~~g~~~~~~~-~~~ 63 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDR------PS--L-S-KAV--------LDGSLERPPI-LAE 63 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCS------GG--G-G-THH--------HHTSSSSCCB-SSC
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCC------cc--c-c-HHH--------hCCCCCHHHh-cCC
Confidence 4899999999999999999999987 99999977654320 00 0 0 000 0011111111 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITIDE 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~ 198 (507)
.+++++.+++++.+ ++..++.....+.+.+| ..+.||+||||||++|.. +||....+
T Consensus 64 ------------------~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~ipG~~~~~ 123 (410)
T 3ef6_A 64 ------------------ADWYGEARIDMLTGPEVTALDVQTRTISLDDG--TTLSADAIVIATGSRARTMALPGSQLPG 123 (410)
T ss_dssp ------------------TTHHHHTTCEEEESCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTTTSTT
T ss_pred ------------------HHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEccCCcccCCCCCCccccc
Confidence 23456779999999 78888888778887777 689999999999998854 45544222
Q ss_pred ce-Eecchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCcEEE
Q 010573 199 KR-IVSSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFM 273 (507)
Q Consensus 199 ~~-~~~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv~i~ 273 (507)
.. +.+..++..+. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||+++
T Consensus 124 v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 203 (410)
T 3ef6_A 124 VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVE 203 (410)
T ss_dssp EECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEE
T ss_pred eEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEE
Confidence 22 22444544433 3489999999999999999999999999999999998876 4789999999999999999999
Q ss_pred cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEec
Q 010573 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (507)
Q Consensus 274 ~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~G 353 (507)
+++.|++++.++....+++. +++++++|.||+|+|++|++++ ++..|++++ + +|.||++++|+.|+|||+|
T Consensus 204 ~~~~v~~i~~~~~~~~v~~~-----dg~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~-gi~vd~~~~t~~~~IyA~G 274 (410)
T 3ef6_A 204 LGTGVVGFSGEGQLEQVMAS-----DGRSFVADSALICVGAEPADQL--ARQAGLACD-R-GVIVDHCGATLAKGVFAVG 274 (410)
T ss_dssp CSCCEEEEECSSSCCEEEET-----TSCEEECSEEEECSCEEECCHH--HHHTTCCBS-S-SEECCTTSBCSSTTEEECG
T ss_pred eCCEEEEEeccCcEEEEEEC-----CCCEEEcCEEEEeeCCeecHHH--HHhCCCccC-C-eEEEccCeeECCCCEEEEE
Confidence 99999999876544456664 5678999999999999999976 677888887 3 4999999999999999999
Q ss_pred CCCCCCC---------cHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEE--cCCCeeeecCCHHHHHHcCCCEEEEEEec
Q 010573 354 DVIPGPM---------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVY--THPEVASVGKTEEQVKELGVEYRVGKFPF 422 (507)
Q Consensus 354 D~a~~~~---------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~--~~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 422 (507)
||+..+. .+..|..||+.||+||+|.. ..|..+|+++. ++..+..+|+++.. .+. +..
T Consensus 275 D~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~-----~~~-~~~--- 343 (410)
T 3ef6_A 275 DVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN--VSAPQLPVSWTEIAGHRMQMAGDIEGP-----GDF-VSR--- 343 (410)
T ss_dssp GGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC--CCCCBCCEEEEEETTEEEEEESCSSSS-----SEE-EEE---
T ss_pred cceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC--CCCCCCCeeEEEECCceEEEEcCCCCC-----CEE-EEE---
Confidence 9996542 48999999999999999875 46777887653 34577888876532 011 000
Q ss_pred CcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCC--CHHHHhc
Q 010573 423 LANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDA--SSEDIAR 481 (507)
Q Consensus 423 ~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~--~~~~l~~ 481 (507)
...+...|.++++ ++++|+|++++|+. .....+..+|+.+. +.++|++
T Consensus 344 -------~~~~~~~~~~~~~--~~~~l~g~~~~~~~--~~~~~~~~~i~~~~~~~~~~l~~ 393 (410)
T 3ef6_A 344 -------GMPGSGAALLFRL--QERRIQAVVAVDAP--RDFALATRLVEARAAIEPARLAD 393 (410)
T ss_dssp -------SCTTSSSEEEEEE--ETTEEEEEEEESCH--HHHHHHHHHHHHTCBCCHHHHHC
T ss_pred -------eeCCCCeEEEEEE--ECCEEEEEEEECCh--HHHHHHHHHHhCCCCCCHHHhcC
Confidence 0112334777777 57999999999993 33445777777655 4555553
No 49
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.7e-42 Score=344.05 Aligned_cols=362 Identities=22% Similarity=0.289 Sum_probs=272.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+||+|||||+||++||.+|++.|+ +|+|||+++..+..... + ++. +.............
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~---l-~~~--------------~l~~~~~~~~~~~~- 62 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPP---L-SKA--------------YLKSGGDPNSLMFR- 62 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGG---G-GTG--------------GGGSCCCTTSSBSS-
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCcc---C-CHH--------------HHCCCCCHHHccCC-
Confidence 589999999999999999999998 89999997754332000 0 000 00011111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCccCCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGITIDEK 199 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~~~~~ 199 (507)
...++.+.+++++...+..++.....+.+.+| ..+.||+||+|||++|.. +|+.. ..
T Consensus 63 -----------------~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~i~g~~--~~ 121 (404)
T 3fg2_P 63 -----------------PEKFFQDQAIELISDRMVSIDREGRKLLLASG--TAIEYGHLVLATGARNRMLDVPNAS--LP 121 (404)
T ss_dssp -----------------CHHHHHHTTEEEECCCEEEEETTTTEEEESSS--CEEECSEEEECCCEEECCCCSTTTT--ST
T ss_pred -----------------CHHHHHhCCCEEEEEEEEEEECCCCEEEECCC--CEEECCEEEEeeCCCccCCCCCCCC--CC
Confidence 13456678999988778888887777888787 689999999999998753 45543 23
Q ss_pred eEe---cchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-CCCHHHHHHHHHHHHhcCcEE
Q 010573 200 RIV---SSTGALALN---EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKF 272 (507)
Q Consensus 200 ~~~---~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~~d~~~~~~~~~~l~~~Gv~i 272 (507)
.++ +..++..+. ..+++++|||+|.+|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||++
T Consensus 122 ~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i 201 (404)
T 3fg2_P 122 DVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRM 201 (404)
T ss_dssp TEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEE
T ss_pred cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEE
Confidence 344 333443332 3489999999999999999999999999999999999876 589999999999999999999
Q ss_pred EcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 273 MLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
++++.|++++.+++.+. +++. +++++++|.||+|+|++|++++ ++..|++.+ +| |.||++++|+.|+|||
T Consensus 202 ~~~~~v~~i~~~~~~v~~V~~~-----dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~G-i~vd~~~~t~~~~iya 272 (404)
T 3fg2_P 202 HYGVRATEIAAEGDRVTGVVLS-----DGNTLPCDLVVVGVGVIPNVEI--AAAAGLPTA-AG-IIVDQQLLTSDPHISA 272 (404)
T ss_dssp ECSCCEEEEEEETTEEEEEEET-----TSCEEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EEECTTSBCSSTTEEE
T ss_pred EECCEEEEEEecCCcEEEEEeC-----CCCEEEcCEEEECcCCccCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEE
Confidence 99999999988766654 6664 5678999999999999999976 677888887 35 9999999999999999
Q ss_pred ecCCCCCCC----------cHhHHHHHHHHHHHHHcCCCCCCCCCCccEEE--EcCCCeeeecCCHHHHHHcCCCEEEEE
Q 010573 352 IGDVIPGPM----------LAHKAEEDGVACVEFLAGKHGHVDYDKVPGVV--YTHPEVASVGKTEEQVKELGVEYRVGK 419 (507)
Q Consensus 352 ~GD~a~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~~~vG~~~~~~~~~~~~~~~~~ 419 (507)
+|||+..+. .+..|..||+.||.||+|.. ..|..+|+++ +++..+..+|++.. .+-.+..
T Consensus 273 ~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~------~~~~~~~ 344 (404)
T 3fg2_P 273 IGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA--KPYDGYPWFWSDQGDDKLQIVGLTAG------FDQVVIR 344 (404)
T ss_dssp CGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC--CCCCCCCEEEEEETTEEEEEEECCTT------CCEEEEE
T ss_pred eecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC--CCCCCCCceEeEECCcEEEEEeCCCC------CCEEEEE
Confidence 999996432 47899999999999999875 4577788765 34456778887642 1111111
Q ss_pred EecCcccchhhcCCcceEEEEEEECCCCeEEEEEEECCChHHHHHHHHHHHHCCCCH
Q 010573 420 FPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASS 476 (507)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~~~~~~~i~~~~~~ 476 (507)
...+...|.++++ ++++|+|+..+|+. .....+..+|+.+.++
T Consensus 345 ----------~~~~~~~~~~~~~--~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~ 387 (404)
T 3fg2_P 345 ----------GSVAERSFSAFCY--KAGKLIGIESVNRA--ADHVFGRKILPLDKSV 387 (404)
T ss_dssp ----------EETTTTEEEEEEE--ETTEEEEEEEESCH--HHHHHHHHHTTTTCCC
T ss_pred ----------ecCCCCcEEEEEE--ECCEEEEEEEeCCH--HHHHHHHHHHHcCCCC
Confidence 0123456888888 47999999999983 4455678888876654
No 50
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.9e-41 Score=324.42 Aligned_cols=291 Identities=26% Similarity=0.382 Sum_probs=213.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+||||||||++||.+|+++|++|+|||+ +.+||+|.+.+|+|...-.. .....
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~~~~i~~~p~~~----------------------~~~~~ 62 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTEEVENFPGFE----------------------MITGP 62 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGGCSCBCCSTTCS----------------------SBCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeecccccCCcCCcc----------------------ccchH
Confidence 69999999999999999999999999999998 68999999999986421100 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCcc-CC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI-DE 198 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~-~~ 198 (507)
++ .........+....+..+. ....+.....+...++ .++.||+||||||++|. .+||... ..
T Consensus 63 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~liiAtGs~~~~~~ipG~~~~~~ 129 (312)
T 4gcm_A 63 DL-----------STKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGN--KELTAKAVIIATGAEYKKIGVPGEQELGG 129 (312)
T ss_dssp HH-----------HHHHHHHHHHTTCEEEECCCCEEEECSSCEEEECSS--CEEEEEEEEECCCEEECCCCCTTTTTTBT
T ss_pred HH-----------HHHHHHHHhhccccccceeeeeeeeeecceeeccCC--eEEEeceeEEcccCccCcCCCCChhhhCC
Confidence 11 1112233444555555543 2222322223333444 67999999999999874 4566542 22
Q ss_pred ceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 199 KRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..+.+..........+|+++|||+|++|+|+|..|+++|.+||++++.+++++... ...+.++..++.......+
T Consensus 130 ~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 204 (312)
T 4gcm_A 130 RGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRI-----LQDRAFKNDKIDFIWSHTL 204 (312)
T ss_dssp TTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHH-----HHHHHHHCTTEEEECSEEE
T ss_pred ccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchh-----HHHHHHHhcCcceeeecce
Confidence 33444443333445589999999999999999999999999999999998765322 2345567788998888887
Q ss_pred EEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 279 VGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 279 ~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
......+.... ........++...+++|.|++++|..|+..+ ++..++. +++|+|.||++||||+|||||+|||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~--~~~~g~~-~~~G~I~vd~~~~Ts~pgIyA~GDv~~ 281 (312)
T 4gcm_A 205 KSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAP--FKDLGIT-NDVGYIVTKDDMTTSVPGIFAAGDVRD 281 (312)
T ss_dssp EEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GGGGTCB-CTTSCBCCCTTSBCSSTTEEECSTTBS
T ss_pred eeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchh--HHhccee-cCCCeEeeCCCCccCCCCEEEEeecCC
Confidence 77766554433 2333344567788999999999999999986 5666665 456899999999999999999999996
Q ss_pred -CCCcHhHHHHHHHHHHHHHc
Q 010573 358 -GPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 358 -~~~~~~~A~~~g~~aa~~i~ 377 (507)
.+.+++.|+.||+.||.||.
T Consensus 282 ~~~~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 282 KGLRQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp CSCCSHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHH
Confidence 45789999999999999985
No 51
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.5e-40 Score=322.76 Aligned_cols=299 Identities=24% Similarity=0.286 Sum_probs=219.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
|++.|||+||||||||++||.+|+++|++|+|||+ ...||.|.+ ||+|++.+.+.. .+++. .+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~-~~~gg~~~~-G~~~~~~~i~~~------------~g~~~---~i 63 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEG-FMAGGVAAG-GQLTTTTIIENF------------PGFPN---GI 63 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECC-SSGGGCCTT-CGGGGSSEECCS------------TTCTT---CE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCcccC-CCcCChHHhhhc------------cCCcc---cC
Confidence 45579999999999999999999999999999998 567888887 888865443211 01110 11
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEE--ecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF--ISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT 195 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~ 195 (507)
+..+ +........++.++++....+.. .+.+...+.+.++ .++.||+||||||++|+ .+||..
T Consensus 64 ~~~~-----------l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~liiATG~~~~~~~ipG~~ 130 (314)
T 4a5l_A 64 DGNE-----------LMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEG--KEVLTKSVIIATGATAKRMHVPGED 130 (314)
T ss_dssp EHHH-----------HHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTC--CEEEEEEEEECCCEEECCCCCTTHH
T ss_pred CHHH-----------HHHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCC--eEEEEeEEEEcccccccccCCCccc
Confidence 2222 22333455667788877765543 3344455555665 78999999999999874 556654
Q ss_pred cC-CceEecchhhccc--cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEE
Q 010573 196 ID-EKRIVSSTGALAL--NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (507)
Q Consensus 196 ~~-~~~~~~~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i 272 (507)
.. ...+......... ...+++++|||+|++|+|+|..|+++|.+||++++.+.... ++. ...+.....+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--~~~---~~~~~~~~~~~~~ 205 (314)
T 4a5l_A 131 KYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--SKT---MQERVLNHPKIEV 205 (314)
T ss_dssp HHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHH---HHHHHHTCTTEEE
T ss_pred cccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--cch---hhhhhhcccceee
Confidence 22 1223333333222 23589999999999999999999999999999998776432 222 2344556778999
Q ss_pred EcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 273 MLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
+....+.++...++.. .+.+.....++++++++|.|++++|++||++++. .++.++++|.+ ||+++|||+|||||
T Consensus 206 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~---~~~~~~~~G~i-v~~~~~Ts~pgIyA 281 (314)
T 4a5l_A 206 IWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLG---GQVKTADDGYI-LTEGPKTSVDGVFA 281 (314)
T ss_dssp ECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT---TSSCBCTTSCB-CCBTTBCSSTTEEE
T ss_pred EeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhc---ccceEcCCeeE-eCCCCccCCCCEEE
Confidence 9999999888765433 3555555566788999999999999999999753 34777877755 89999999999999
Q ss_pred ecCCCCCCC-cHhHHHHHHHHHHHHHc
Q 010573 352 IGDVIPGPM-LAHKAEEDGVACVEFLA 377 (507)
Q Consensus 352 ~GD~a~~~~-~~~~A~~~g~~aa~~i~ 377 (507)
+|||++.+. ++..|+.||+.||.++.
T Consensus 282 ~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 282 CGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp CSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred EEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 999998764 78899999999999874
No 52
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=3.2e-40 Score=338.84 Aligned_cols=408 Identities=18% Similarity=0.191 Sum_probs=266.9
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCc
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS 116 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (507)
+++..+||+|||||+||++||..|++. +.+|+|||+++.++. ..|.+++.++...... ........++....
T Consensus 7 ~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y----~r~~lsk~l~~~~~~~--~~~~~~~~~~~~~~ 80 (493)
T 1m6i_A 7 KAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY----MRPPLSKELWFSDDPN--VTKTLRFKQWNGKE 80 (493)
T ss_dssp -CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB----CSGGGGTGGGCC--CT--HHHHCEEECTTSCE
T ss_pred CCCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC----CCCCCCHHhhcCCccc--hhhccccccccccc
Confidence 345568999999999999999999887 899999999876653 2244455443322100 00000000110000
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHH--HHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCC
Q 010573 117 VEVDLPAMMAQKDKAVSNLTRGIEGL--FKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPG 193 (507)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg 193 (507)
..+.+.... +......+ +.+.+++++.+ .+..+|.....|.+.+| .++.||+||||||++|..+|.
T Consensus 81 ~~~~~~~~~---------~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g--~~i~yd~lviATGs~p~~~~~ 149 (493)
T 1m6i_A 81 RSIYFQPPS---------FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDG--SQITYEKCLIATGGTPRSLSA 149 (493)
T ss_dssp EESBSSCGG---------GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTS--CEEEEEEEEECCCEEECCCHH
T ss_pred ccccccchH---------hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCC
Confidence 000000000 00000001 13468999988 67777766667777777 679999999999999865543
Q ss_pred Ccc------CCce-Eecchhhcccc---CCCCeEEEEcCcHHHHHHHHHHHh----cCCeeEEEcccCccCC-CCCHHHH
Q 010573 194 ITI------DEKR-IVSSTGALALN---EVPKKLVVIGAGYIGLEMGSVWAR----LGSEVTVVEFAADIVP-SMDGEIR 258 (507)
Q Consensus 194 ~~~------~~~~-~~~~~~~~~~~---~~~~~vvVvG~G~~g~e~A~~l~~----~g~~Vtlv~~~~~~~~-~~d~~~~ 258 (507)
... .... +.+..++..+. ..+++++|||+|++|+|+|..|.+ .|.+|+++++.+.+++ .+++++.
T Consensus 150 ~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~ 229 (493)
T 1m6i_A 150 IDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLS 229 (493)
T ss_dssp HHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHH
T ss_pred cccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHH
Confidence 221 1111 22444544433 248999999999999999999876 5789999998876654 5788999
Q ss_pred HHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecC-CCCee
Q 010573 259 KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDK-MGRIP 337 (507)
Q Consensus 259 ~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~-~G~i~ 337 (507)
+.+.+.+++.||++++++.|++++.+++.+.+++. +++++++|.||+|+|.+|++.+ ++.+|+++++ +|+|.
T Consensus 230 ~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~-----dG~~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~~~~ggi~ 302 (493)
T 1m6i_A 230 NWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLK-----DGRKVETDHIVAAVGLEPNVEL--AKTGGLEIDSDFGGFR 302 (493)
T ss_dssp HHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEET-----TSCEEEESEEEECCCEEECCTT--HHHHTCCBCTTTCSEE
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEEC-----CCCEEECCEEEECCCCCccHHH--HHHcCCccccCCCcEE
Confidence 99999999999999999999999877666667664 4568999999999999999986 6778888875 68999
Q ss_pred cCCCCCCCCCCeEEecCCCCCC---------CcHhHHHHHHHHHHHHHcCCCCCCCCCCccEEEEcC---CCeeeecCCH
Q 010573 338 VNERFATNIPGVYAIGDVIPGP---------MLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTH---PEVASVGKTE 405 (507)
Q Consensus 338 Vd~~~~t~~~~IyA~GD~a~~~---------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~---~~~~~vG~~~ 405 (507)
||++||| .|+|||+|||+..+ ..+..|..||+.||.||++... .|...|+++... ..+..+|...
T Consensus 303 Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~--~~~~~~~~~s~~~~~~~~~~~g~~~ 379 (493)
T 1m6i_A 303 VNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAK--PYWHQSMFWSDLGPDVGYEAIGLVD 379 (493)
T ss_dssp CCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCCC--CCCCCCEEEEESSTTCEEEEEECCC
T ss_pred ECCCccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCCC--CcCCcCceeeeeccCcceEEEeccC
Confidence 9999998 59999999999532 2467999999999999998753 456666643221 1223333221
Q ss_pred HHHHHcCCCEEEEEEecCcc-------------cch-----------hh-------------cCCcceEEEEEEECCCCe
Q 010573 406 EQVKELGVEYRVGKFPFLAN-------------SRA-----------KA-------------IDDAEGIVKILAEKETDK 448 (507)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~-------------~~~-----------~~-------------~~~~~~~~k~~~~~~~~~ 448 (507)
......|.. ...... .+. .+ ......|..+++ ++++
T Consensus 380 ~~~~~~G~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 452 (493)
T 1m6i_A 380 SSLPTVGVF-----AKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYL--RDKV 452 (493)
T ss_dssp TTSCEEEEE-----ECCCTTCSHHHHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEE--ETTE
T ss_pred CCcceEEee-----cccccccccccccccccccccccccccccccccccccccccccccccccccCCcEEEEEE--eCCE
Confidence 111111100 000000 000 00 001223566766 4799
Q ss_pred EEEEEEECCChHHHHHHHHHHHHCCCCHHHHhcC
Q 010573 449 ILGVHIMAPNAGELIHEAVLAINYDASSEDIARV 482 (507)
Q Consensus 449 ilG~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~~ 482 (507)
|+|+..+|.-. .+..+..+|+.+.+++++.++
T Consensus 453 ~~g~~~~~~~~--~~~~~~~li~~~~~~~~~~~~ 484 (493)
T 1m6i_A 453 VVGIVLWNIFN--RMPIARKIIKDGEQHEDLNEV 484 (493)
T ss_dssp EEEEEEESCCS--CHHHHHHHHHHCCBCSCSTTG
T ss_pred EEEEEEecCcc--hHHHHHHHHhCCCCCCCHHHH
Confidence 99999999832 244578888888887777653
No 53
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.3e-38 Score=308.88 Aligned_cols=295 Identities=24% Similarity=0.271 Sum_probs=218.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..++||+||||||||+++|..|++.|++|+|||++ .+||.|.+..++... .++.. ..+
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~------------------~~~~~---~~~ 63 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENF------------------PGFPE---PIA 63 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCS------------------TTCSS---CBC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccC------------------CCCCC---CCC
Confidence 34589999999999999999999999999999997 789988765432110 00000 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCC---E--EEEEccCCceEEEEeCeEEEccCCCCC--CCCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS---E--VSVDTIEGGNTVVKGKNIIIATGSDVK--SLPG 193 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~---~--~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg 193 (507)
.. .+...+.+.+++.+++++.+.+..++.. . +.+.+.+| ..+.||+||+|||+.|. .+|+
T Consensus 64 ~~-----------~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~i~g 130 (325)
T 2q7v_A 64 GM-----------ELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYN--GEYRAKAVILATGADPRKLGIPG 130 (325)
T ss_dssp HH-----------HHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESS--CEEEEEEEEECCCEEECCCCCTT
T ss_pred HH-----------HHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCC
Confidence 11 1223334556677899888776665432 2 55656666 57999999999999774 3455
Q ss_pred Ccc-CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEE
Q 010573 194 ITI-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKF 272 (507)
Q Consensus 194 ~~~-~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i 272 (507)
... ....+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+. ++.+++.||++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~~~~---~~l~~~~gv~i 205 (325)
T 2q7v_A 131 EDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA--NKVAQ---ARAFANPKMKF 205 (325)
T ss_dssp TTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS--CHHHH---HHHHTCTTEEE
T ss_pred hhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc--chHHH---HHHHhcCCceE
Confidence 431 1223444333333344579999999999999999999999999999999886532 43332 23334569999
Q ss_pred EcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEe
Q 010573 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAI 352 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 352 (507)
+++++++++..++....+.+.+..+|+..++++|.||+|+|++|++++ ++.. ++++++|+|.||++++|+.|+|||+
T Consensus 206 ~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~-~~~~~~g~i~vd~~~~t~~~~vya~ 282 (325)
T 2q7v_A 206 IWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAF--VKDT-VSLRDDGYVDVRDEIYTNIPMLFAA 282 (325)
T ss_dssp ECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCBTTTBCSSTTEEEC
T ss_pred ecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHH--Hhhh-cccCCCccEecCCCCccCCCCEEEe
Confidence 999999999875443356665433445568999999999999999987 4455 7778889999999999999999999
Q ss_pred cCCCCC-CCcHhHHHHHHHHHHHHHcC
Q 010573 353 GDVIPG-PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 353 GD~a~~-~~~~~~A~~~g~~aa~~i~~ 378 (507)
|||+.. +.++..|..||+.||.||..
T Consensus 283 GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 283 GDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp STTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 999976 67899999999999999974
No 54
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=2.8e-38 Score=307.93 Aligned_cols=291 Identities=24% Similarity=0.294 Sum_probs=221.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
++||+|||||+||+++|.+|++.|++|+|||++ +||.|.+.+...... +.. ...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~------------------~~~----~~~-- 68 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYL------------------GLI----EIQ-- 68 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCST------------------TST----TEE--
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccC------------------CCC----CCC--
Confidence 589999999999999999999999999999996 899876533211000 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecC--CEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCcc-C
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITI-D 197 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~--~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~-~ 197 (507)
...+...+.+.+++.+++++...+..++. +.+.+.+.++ ..+.||+||+|||+.|. .+|+... .
T Consensus 69 ---------~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~~~~ 137 (323)
T 3f8d_A 69 ---------ASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRK--GEFKADSVILGIGVKRRKLGVPGEQEFA 137 (323)
T ss_dssp ---------HHHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSS--CEEEEEEEEECCCCEECCCCCTTTTTTB
T ss_pred ---------HHHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCC--CEEEcCEEEECcCCCCccCCCCchhhhc
Confidence 11233334556677788888876666543 3566777776 68999999999999874 3455432 1
Q ss_pred CceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCce
Q 010573 198 EKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
...++...........+++++|+|+|.+|+|+|..+.+.|.+|+++++.+++++ ++++ +.+.+++.||+++++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~~---~~~~~~~~gv~~~~~~~ 212 (323)
T 3f8d_A 138 GRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--QPIY---VETVKKKPNVEFVLNSV 212 (323)
T ss_dssp TTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--CHHH---HHHHHTCTTEEEECSEE
T ss_pred CCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHHH---HHHHHhCCCcEEEeCCE
Confidence 233433333333344589999999999999999999999999999999988765 3332 33344456999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC
Q 010573 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP 357 (507)
Q Consensus 278 v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~ 357 (507)
+++++.+++...+++.+..+|+..++++|.|++|+|++|++++ ++..|++++++|+|.||++++|+.|||||+|||++
T Consensus 213 v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~ 290 (323)
T 3f8d_A 213 VKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDF--AKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTS 290 (323)
T ss_dssp EEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHH--HHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBS
T ss_pred EEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhH--HhhcCeeecCCCcEecCCCceecCCCEEEcceecC
Confidence 9999877655567776544455568999999999999999876 67788999999999999999999999999999998
Q ss_pred C---CCcHhHHHHHHHHHHHHHc
Q 010573 358 G---PMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 358 ~---~~~~~~A~~~g~~aa~~i~ 377 (507)
. +..+..|..||+.||.+|.
T Consensus 291 ~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 291 AWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp TTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcccceeehhhHHHHHHHHHH
Confidence 5 7899999999999999986
No 55
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=8.4e-38 Score=302.98 Aligned_cols=293 Identities=23% Similarity=0.255 Sum_probs=218.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+|||+|||||+||+++|..|++.|+ +|+|||+ ..+||.|.+..++.... ++. ..++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~~~~~~~~~~~------------------~~~---~~~~~ 58 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEK-GMPGGQITGSSEIENYP------------------GVK---EVVSG 58 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECS-SSTTCGGGGCSCBCCST------------------TCC---SCBCH
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcC-CCCCcccccccccccCC------------------CCc---ccCCH
Confidence 3799999999999999999999999 9999999 57899887654322100 000 01122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCc-c
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGIT-I 196 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~-~ 196 (507)
. .+...+.+.+++.+++++..++..++ .+.+.+.+.++ ..+.||+||+|||+.|.. +|+.. .
T Consensus 59 ~-----------~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~~~g~~~~ 125 (311)
T 2q0l_A 59 L-----------DFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDG--KTFEAKSVIIATGGSPKRTGIKGESEY 125 (311)
T ss_dssp H-----------HHHHHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCEEECCCCCBTHHHH
T ss_pred H-----------HHHHHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCC--CEEECCEEEECCCCCCCCCCCCChhhc
Confidence 2 12233345566778988876665543 45566766666 579999999999987743 34432 1
Q ss_pred CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHH-hcCcEEEcC
Q 010573 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLE-KQKMKFMLK 275 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~-~~Gv~i~~~ 275 (507)
.+..+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++++ .+.+. +.||+++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~----~~~l~~~~gv~v~~~ 199 (311)
T 2q0l_A 126 WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAPIT----LEHAKNNDKIEFLTP 199 (311)
T ss_dssp BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCHHH----HHHHHTCTTEEEETT
T ss_pred cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCHHH----HHHHhhCCCeEEEeC
Confidence 123344443333334457999999999999999999999999999999988753 34443 33444 579999999
Q ss_pred ceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCccc----CceecCCCCeecCCCCCCCCCCeE
Q 010573 276 TKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKI----GVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 276 ~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~----gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
+++++++.+++++ .+.+....+|+..++++|.|++|+|++|++++ ++.. +++++++|+|.||+++||+.|+||
T Consensus 200 ~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vy 277 (311)
T 2q0l_A 200 YVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAV--LKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLF 277 (311)
T ss_dssp EEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGG--GBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEE
T ss_pred CEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhh--hhcccccceeEeccCCCEEeCCccccCCCCeE
Confidence 9999998775554 46665433444568999999999999999887 4455 388888899999999999999999
Q ss_pred EecCCCCC-CCcHhHHHHHHHHHHHHHcC
Q 010573 351 AIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 351 A~GD~a~~-~~~~~~A~~~g~~aa~~i~~ 378 (507)
|+|||+.. +.++..|..||+.||.||..
T Consensus 278 a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 278 AAGDIRIFAPKQVVCAASDGATAALSVIS 306 (311)
T ss_dssp ECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EcccccCcchHHHHHHHHhHHHHHHHHHH
Confidence 99999976 67999999999999999863
No 56
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.2e-37 Score=301.86 Aligned_cols=290 Identities=26% Similarity=0.382 Sum_probs=219.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+|||+||||||||+++|..|++.|++|+|||+ ..||.|.....++... +.. ..+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~~~~~~------------------~~~----~~~~- 55 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVDIENYI------------------SVP----KTEG- 55 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCEECCBT------------------TBS----SEEH-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccccccccc------------------CcC----CCCH-
Confidence 37999999999999999999999999999976 5788876543322100 000 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCC-----EEEEEccCCceEEEEeCeEEEccCCCCC--CCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS-----EVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGI 194 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~-----~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~ 194 (507)
..+...+...+++.+++++.+ ++..++.+ .+.+.+.+| ..+.||+||+|||+.|. .+|+.
T Consensus 56 ----------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~~~~~g~ 123 (310)
T 1fl2_A 56 ----------QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG--AVLKARSIIVATGAKWRNMNVPGE 123 (310)
T ss_dssp ----------HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS--CEEEEEEEEECCCEEECCCCCTTT
T ss_pred ----------HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCCh
Confidence 122333455667789999988 67777543 567777777 67999999999998774 34554
Q ss_pred c-cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh-cCcEE
Q 010573 195 T-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKMKF 272 (507)
Q Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~i 272 (507)
. .....+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++. +.+.+++ .||++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~----~~~~l~~~~gv~v 197 (310)
T 1fl2_A 124 DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--ADQV----LQDKLRSLKNVDI 197 (310)
T ss_dssp TTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SCHH----HHHHHHTCTTEEE
T ss_pred hhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--ccHH----HHHHHhhCCCeEE
Confidence 3 1123344444333333458999999999999999999999999999999988762 3433 4455666 69999
Q ss_pred EcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 273 MLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
+++++++++..+++.+ .+++.+..+++..++++|.|++|+|++|+++++ +.. ++++++|+|.||+++||+.|+|||
T Consensus 198 ~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~-l~~~~~g~i~vd~~~~t~~~~vya 274 (310)
T 1fl2_A 198 ILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWL--EGA-VERNRMGEIIIDAKCETNVKGVFA 274 (310)
T ss_dssp ESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--TTT-SCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred ecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHH--hcc-ccccCCCcEEcCCCCccCCCCEEE
Confidence 9999999998765554 466655444555689999999999999999864 333 778888999999999999999999
Q ss_pred ecCCCCCC-CcHhHHHHHHHHHHHHHcC
Q 010573 352 IGDVIPGP-MLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 352 ~GD~a~~~-~~~~~A~~~g~~aa~~i~~ 378 (507)
+|||+..+ ..+..|+.||+.||.+|..
T Consensus 275 ~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 275 AGDCTTVPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp CSTTBSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred eecccCCcchhhhhhHhhHHHHHHHHHH
Confidence 99999865 5789999999999999863
No 57
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.8e-37 Score=301.85 Aligned_cols=294 Identities=23% Similarity=0.331 Sum_probs=217.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
|...+||+|||||+||+++|..|++.|++|+|||+ ..+||.|.+..++... . ++ ...
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~~~----------------~--~~----~~~ 69 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPLVENY----------------L--GF----KSI 69 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSCBCCB----------------T--TB----SSB
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccchhhhc----------------C--CC----ccc
Confidence 34468999999999999999999999999999999 6788887655432110 0 00 011
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~ 195 (507)
+.. .+...+.+.+++.+++++.+++..++ .+.+.+.+ ++ ..+.||+||+|||+.|.. +|+..
T Consensus 70 ~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~--~~~~~~~li~AtG~~~~~~~i~g~~ 135 (319)
T 3cty_A 70 VGS-----------ELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIET-ND--DTYHAKYVIITTGTTHKHLGVKGES 135 (319)
T ss_dssp CHH-----------HHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SS--SEEEEEEEEECCCEEECCCCCBTTT
T ss_pred CHH-----------HHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CC--CEEEeCEEEECCCCCcccCCCCChH
Confidence 111 12223345566778988876665554 45555655 44 468999999999987743 34432
Q ss_pred c-CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 010573 196 I-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 196 ~-~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
. ....++...........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++. +.+.+++.||++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--~~~----l~~~l~~~gv~i~~ 209 (319)
T 3cty_A 136 EYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--ENA----YVQEIKKRNIPYIM 209 (319)
T ss_dssp TTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--CHH----HHHHHHHTTCCEEC
T ss_pred HhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--CHH----HHHHHhcCCcEEEc
Confidence 1 1123333333323334579999999999999999999999999999999876532 333 44556688999999
Q ss_pred CceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEec
Q 010573 275 KTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIG 353 (507)
Q Consensus 275 ~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~G 353 (507)
+++++++..+++.+ .+.+.+..+|+..++++|.||+|+|++|++++ ++..|++++++|+|.||++++|+.|+|||+|
T Consensus 210 ~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~vya~G 287 (319)
T 3cty_A 210 NAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSF--LKDSGVKLDERGYIVVDSRQRTSVPGVYAAG 287 (319)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGG--GTTSCCCBCTTSCBCCCTTCBCSSTTEEECS
T ss_pred CCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHH--HhhccccccCCccEeCCCCCccCCCCEEEee
Confidence 99999998765523 45554333444457999999999999999987 4677888888899999999999999999999
Q ss_pred CCCCC-CCcHhHHHHHHHHHHHHHcC
Q 010573 354 DVIPG-PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 354 D~a~~-~~~~~~A~~~g~~aa~~i~~ 378 (507)
||++. +.++..|..||+.||.||..
T Consensus 288 D~~~~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 288 DVTSGNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp TTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHH
Confidence 99976 47899999999999999863
No 58
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=8.9e-38 Score=303.27 Aligned_cols=295 Identities=21% Similarity=0.232 Sum_probs=223.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEE-EecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTC-IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~l-ie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.++||+|||||+||++||..|++.|++|+| +|+ +.+||.|.+..+++... +.. ....
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~------------------~~~---~~~~ 60 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYP------------------GVA---QVMD 60 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCST------------------TCC---SCBC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCC------------------CCC---CCCC
Confidence 458999999999999999999999999999 999 78899887654432110 000 0111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEe-cC--CEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI-SP--SEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT 195 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-d~--~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~ 195 (507)
. ..+..++...+++.+++++.+++..+ +. ..+.+.+..+. .+.||+||+|||+.|. .+|+..
T Consensus 61 ~-----------~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~~~~~~g~~ 127 (315)
T 3r9u_A 61 G-----------ISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK--TELAKAVIVCTGSAPKKAGFKGED 127 (315)
T ss_dssp H-----------HHHHHHHHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC--EEEEEEEEECCCEEECCCCCBTTT
T ss_pred H-----------HHHHHHHHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC--EEEeCEEEEeeCCCCCCCCCCChh
Confidence 1 22333445667778999988876666 44 44664344442 8999999999999774 345544
Q ss_pred c-CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 010573 196 I-DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 196 ~-~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
. ....+++..........+++++|||+|.+|+|+|..+.+.|.+|+++++.+.+. .++++ +.+.+++.||++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~--~~~~~---~~~~~~~~gv~~~~ 202 (315)
T 3r9u_A 128 EFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR--AAPST---VEKVKKNEKIELIT 202 (315)
T ss_dssp TTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB--SCHHH---HHHHHHCTTEEEEC
T ss_pred hcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC--CCHHH---HHHHHhcCCeEEEe
Confidence 2 224455555554555568999999999999999999999999999999988762 24433 34555788999999
Q ss_pred CceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCC-cccC-ceecCCCCeecCCCCCCCCCCeEE
Q 010573 275 KTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGL-DKIG-VETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 275 ~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~-~~~g-l~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
++.+++++.+++.+. +++. ..+|+..++++|.|++|+|++|+..++.. +.+| ++++++|+|.||+++||+.|||||
T Consensus 203 ~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a 281 (315)
T 3r9u_A 203 SASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFA 281 (315)
T ss_dssp SCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEE
Confidence 999999988775543 5554 23444468999999999999999987532 3465 889999999999999999999999
Q ss_pred ecCCCC-CCCcHhHHHHHHHHHHHHHc
Q 010573 352 IGDVIP-GPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 352 ~GD~a~-~~~~~~~A~~~g~~aa~~i~ 377 (507)
+|||++ .+..+..|+.||+.||.+|.
T Consensus 282 ~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 282 AGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eecccCCchhhhhhHHhhHHHHHHHHH
Confidence 999985 56789999999999999986
No 59
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=9e-39 Score=327.49 Aligned_cols=298 Identities=20% Similarity=0.250 Sum_probs=216.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+.+|||||||+||+++|.+|++.+++|+|||+++.. .+ .++..+.....++......+
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~----~~----------------~PlL~~va~G~l~~~~i~~p 99 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF----LF----------------TPLLPSAPVGTVDEKSIIEP 99 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE----EC----------------GGGGGGTTTTSSCGGGGEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc----cc----------------ccchhHHhhccccHHHhhhh
Confidence 34568999999999999999999999999999996431 11 11111111222222221112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEcc------------------CCceEEEEeCeEEE
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTI------------------EGGNTVVKGKNIII 182 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~------------------~g~~~~~~~d~lvl 182 (507)
...+ ....+.+++++.+++..+|.+...|.+. .++..++.||+|||
T Consensus 100 ~~~~----------------~~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LVi 163 (502)
T 4g6h_A 100 IVNF----------------ALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLIS 163 (502)
T ss_dssp HHHH----------------HTTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEE
T ss_pred HHHH----------------HHhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEE
Confidence 1110 1123458999999998888765555432 12347899999999
Q ss_pred ccCCCCC--CCCCCccCCceEecchhhcccc-------------C-------CCCeEEEEcCcHHHHHHHHHHHhcC---
Q 010573 183 ATGSDVK--SLPGITIDEKRIVSSTGALALN-------------E-------VPKKLVVIGAGYIGLEMGSVWARLG--- 237 (507)
Q Consensus 183 AtG~~p~--~~pg~~~~~~~~~~~~~~~~~~-------------~-------~~~~vvVvG~G~~g~e~A~~l~~~g--- 237 (507)
|||+.|. .+||.......+.+..++..+. . ...+++|||+|++|+|+|..+.+++
T Consensus 164 AtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~ 243 (502)
T 4g6h_A 164 AVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQD 243 (502)
T ss_dssp CCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHT
T ss_pred cCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHH
Confidence 9999884 5677543333344444443221 0 1258999999999999999987543
Q ss_pred -----------CeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCC--ceEEEE
Q 010573 238 -----------SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGG--EKTILE 304 (507)
Q Consensus 238 -----------~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g--~~~~i~ 304 (507)
.+|++++..+++++.+++++++.+++.|++.||++++++.|++++ ++++.+.... +++ .+++++
T Consensus 244 l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~-~dg~~~~~~i~ 320 (502)
T 4g6h_A 244 LRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKH-EDGKITEETIP 320 (502)
T ss_dssp HHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEEC-TTSCEEEEEEE
T ss_pred HHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEe-cCcccceeeec
Confidence 689999999999999999999999999999999999999999994 5555554332 222 235799
Q ss_pred cCEEEEeecCCCCCC--CCCCcccCceecCCCCeecCCCCCC-CCCCeEEecCCCC--CCCcHhHHHHHHHHHHHHHcC
Q 010573 305 ADVVLVSAGRTPFTA--GLGLDKIGVETDKMGRIPVNERFAT-NIPGVYAIGDVIP--GPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 305 ~D~vi~a~G~~p~~~--~l~~~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~a~--~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+|.||+|+|.+|+.. .+ ....+...+.+|+|.||++||| +.|||||+|||+. .|+.++.|.+||+++|+||.+
T Consensus 321 ad~viwa~Gv~~~~~~~~l-~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 321 YGTLIWATGNKARPVITDL-FKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp CSEEEECCCEECCHHHHHH-HHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEccCCcCCHHHHhH-HHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 999999999999842 11 2344666778899999999997 8999999999994 467999999999999999963
No 60
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=6.2e-38 Score=302.70 Aligned_cols=284 Identities=15% Similarity=0.195 Sum_probs=202.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec-cccccchhhhhhhhHHHHHHHhhhhhCCcccCccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL-NVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (507)
+++.|||+||||||||++||.+|+|.|++|+|||++ ..||.+. +..+++... .
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~~~~~~~~~-------------------------~ 56 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQNSHGFITRD-------------------------G 56 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSCBCCSTTCT-------------------------T
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeeecCCccCCC-------------------------C
Confidence 345699999999999999999999999999999995 5565432 111111100 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEE---ecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCC
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---ISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPG 193 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg 193 (507)
.....+... ...+..+...+.++...+.. .+...+.+.+.+| .++.||+||||||++|. .+||
T Consensus 57 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~a~~liiATGs~p~~p~i~G 124 (304)
T 4fk1_A 57 IKPEEFKEI----------GLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDH--TKYLAERVLLATGMQEEFPSIPN 124 (304)
T ss_dssp BCHHHHHHH----------HHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTC--CEEEEEEEEECCCCEEECCSCTT
T ss_pred CCHHHHHHH----------HHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCC--CEEEeCEEEEccCCccccccccC
Confidence 111111111 01122333456666665543 3455677777777 78999999999999884 4555
Q ss_pred Cc-cCCceEecchhhccccCCCCeEEEEcCcH-HHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcE
Q 010573 194 IT-IDEKRIVSSTGALALNEVPKKLVVIGAGY-IGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~vvVvG~G~-~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
.. ..+..++++.........+++++|||+|. .++|+|..+.+.+.+|+++.+.+.+ . +.+.+.+++.|++
T Consensus 125 ~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~----~----~~~~~~l~~~g~~ 196 (304)
T 4fk1_A 125 VREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL----S----QTIMDELSNKNIP 196 (304)
T ss_dssp HHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC----C----HHHHHHHHTTTCC
T ss_pred ccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc----h----hhhhhhhhcccee
Confidence 43 23345666655555555677888888775 5689999999999999999876643 2 3456678889999
Q ss_pred EEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeE
Q 010573 272 FMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVY 350 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 350 (507)
++.+ .++.+..+++.+ .+++. +++++++|.++++.|.+|+..+ +++.|++++++|+|.||+++|||+||||
T Consensus 197 ~~~~-~v~~~~~~~~~~~~v~~~-----~g~~i~~~~~vi~~g~~~~~~~--~~~~g~~~~~~G~I~vd~~~~Ts~p~Iy 268 (304)
T 4fk1_A 197 VITE-SIRTLQGEGGYLKKVEFH-----SGLRIERAGGFIVPTFFRPNQF--IEQLGCELQSNGTFVIDDFGRTSEKNIY 268 (304)
T ss_dssp EECS-CEEEEESGGGCCCEEEET-----TSCEECCCEEEECCEEECSSCH--HHHTTCCCCTTSSSCSSTTCBCSSTTEE
T ss_pred Eeee-eEEEeecCCCeeeeeecc-----ccceeeecceeeeeccccCChh--hhhcCeEECCCCCEEECcCCccCCCCEE
Confidence 9876 477776655444 35554 5678999998888887777665 6788999999999999999999999999
Q ss_pred EecCCCC-CCCcHhHHHHHHHHHHHHHc
Q 010573 351 AIGDVIP-GPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 351 A~GD~a~-~~~~~~~A~~~g~~aa~~i~ 377 (507)
|+|||++ .+.++..|+.||+.||..|.
T Consensus 269 A~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 269 LAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp ECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 9999995 45578899999999998874
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-37 Score=303.89 Aligned_cols=299 Identities=20% Similarity=0.297 Sum_probs=221.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.++||+|||||+||+++|..|++.|++|+|||+++.+||.|.+. .|++.+... .++ .....
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~~~~~~-------------~~~----~~~~~ 64 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL--YPEKYIYDV-------------AGF----PKVYA 64 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT--CTTSEECCS-------------TTC----SSEEH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc--CCCceeecc-------------CCC----CCCCH
Confidence 35899999999999999999999999999999998999987542 232211100 000 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCC---CC--CCCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSD---VK--SLPG 193 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~---p~--~~pg 193 (507)
. .+...+.+.+++.+++++.+ .+..++ .+.+.+.+.++ ..+.||+||+|||+. |. .+|+
T Consensus 65 ~-----------~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~p~~~~i~g 131 (335)
T 2zbw_A 65 K-----------DLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQG--NAYTAKAVIIAAGVGAFEPRRIGAPG 131 (335)
T ss_dssp H-----------HHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCTTSEEEECCCCCTT
T ss_pred H-----------HHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCC--CEEEeCEEEECCCCCCCCCCCCCCCC
Confidence 1 12223344555667887665 454443 33567777666 679999999999994 43 3444
Q ss_pred Cc-cCCceEec-chhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcE
Q 010573 194 IT-IDEKRIVS-STGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 194 ~~-~~~~~~~~-~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
.. .....+++ ..+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ .++..+.+.+.+++.||+
T Consensus 132 ~~~~~~~~~~~~~~~~~--~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~ 207 (335)
T 2zbw_A 132 EREFEGRGVYYAVKSKA--EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--HEASVKELMKAHEEGRLE 207 (335)
T ss_dssp TTTTBTTTEESSCSCGG--GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSE
T ss_pred hhhccCcEEEEecCchh--hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--cHHHHHHHHhccccCCeE
Confidence 43 11222322 11211 12479999999999999999999999999999999887654 367778888899999999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
+++++.+++++.+++...+++....+++.+++++|.|++|+|++|++++ ++..+++++ +|+|.||+++||+.|+|||
T Consensus 208 v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~t~~~~vya 284 (335)
T 2zbw_A 208 VLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGP--LANWGLALE-KNKIKVDTTMATSIPGVYA 284 (335)
T ss_dssp EETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGG--GGGSCCCEE-TTEEECCTTCBCSSTTEEE
T ss_pred EecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchH--hhhcceecc-CCeeeeCCCCCCCCCCEEE
Confidence 9999999999875443356665333445578999999999999999876 567788877 6899999999999999999
Q ss_pred ecCCCC---CCCcHhHHHHHHHHHHHHHcCC
Q 010573 352 IGDVIP---GPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 352 ~GD~a~---~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
+|||+. .+.++..|..||+.||.||.+.
T Consensus 285 ~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 315 (335)
T 2zbw_A 285 CGDIVTYPGKLPLIVLGFGEAAIAANHAAAY 315 (335)
T ss_dssp CSTTEECTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eccccccCcchhhhhhhHHHHHHHHHHHHHH
Confidence 999994 3578999999999999999743
No 62
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.1e-37 Score=303.76 Aligned_cols=297 Identities=24% Similarity=0.236 Sum_probs=219.6
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC----CCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCccc
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR----GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF 114 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~----~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~ 114 (507)
++..++||+|||||++|+++|..|++.|++|+|||++ ..+||.+.....+... .++..
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~------------------~~~~~ 79 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENF------------------PGFPD 79 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCS------------------TTCTT
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhccc------------------CCCcc
Confidence 3445689999999999999999999999999999994 4788876543311100 00000
Q ss_pred CccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecC--CEEEEEcc---CCceEEEEeCeEEEccCCCCC
Q 010573 115 SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP--SEVSVDTI---EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~--~~~~v~~~---~g~~~~~~~d~lvlAtG~~p~ 189 (507)
.... ..+...+...+++.+++++.+++..++. +.+.+.+. ++ ..+.||+||+|||+.|.
T Consensus 80 ---~~~~-----------~~~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~--~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 80 ---GLTG-----------SELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDA--EPVTTDAIILATGASAK 143 (338)
T ss_dssp ---CEEH-----------HHHHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSS--CCEEEEEEEECCCEEEC
T ss_pred ---cCCH-----------HHHHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCC--cEEEeCEEEECcCCCcC
Confidence 0001 2233344566677899999887666554 44555542 34 67899999999999774
Q ss_pred --CCCCCc-cCCceEecchhhccc--cCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHH
Q 010573 190 --SLPGIT-IDEKRIVSSTGALAL--NEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRS 264 (507)
Q Consensus 190 --~~pg~~-~~~~~~~~~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~ 264 (507)
.+|+.. .....+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ ...+.+.
T Consensus 144 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~~~ 217 (338)
T 3itj_A 144 RMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQKR 217 (338)
T ss_dssp CCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHHHH
T ss_pred CCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHHHH
Confidence 345543 112334444333322 34589999999999999999999999999999999887654 2334455
Q ss_pred HHhc-CcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeec-CCC
Q 010573 265 LEKQ-KMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPV-NER 341 (507)
Q Consensus 265 l~~~-Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~V-d~~ 341 (507)
+.+. ||++++++.+++++.+++++. +++.+..+++++++++|.||+|+|++|+..++ +. +++++++|++.| |++
T Consensus 218 l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~~-~l~~~~~G~i~v~~~~ 294 (338)
T 3itj_A 218 AEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIV--AG-QVDTDEAGYIKTVPGS 294 (338)
T ss_dssp HHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGG--BT-TBCBCTTSCBCCCTTS
T ss_pred HHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHh--hC-ceEecCCCcEEEcCcc
Confidence 5554 999999999999988776554 77765555567889999999999999999863 34 899998999995 888
Q ss_pred CCCCCCCeEEecCCCCC-CCcHhHHHHHHHHHHHHHcC
Q 010573 342 FATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 342 ~~t~~~~IyA~GD~a~~-~~~~~~A~~~g~~aa~~i~~ 378 (507)
++|+.|||||+|||+.. +..+..|+.||+.||.+|..
T Consensus 295 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 295 SLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp SBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHH
Confidence 99999999999999974 57889999999999999863
No 63
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.3e-37 Score=301.15 Aligned_cols=293 Identities=20% Similarity=0.260 Sum_probs=220.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
.+||+|||||+||+++|..|++.|++|+|||+ ..+||.|......... .++. ..+...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~~~------------------~~~~---~~~~~~ 62 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTTTEVENW------------------PGDP---NDLTGP 62 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGGCSBCCCS------------------TTCC---SSCBHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEecchhhhhC------------------CCCC---CCCCHH
Confidence 47999999999999999999999999999997 5788876543221100 0000 001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecC--CEEEEEccCCceEEEEeCeEEEccCCCCCC--CCCCc-cC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVKS--LPGIT-ID 197 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~--~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~-~~ 197 (507)
.+...+...+++.+++++.+++..++. +.+.+ +.++ ..+.||+||+|||+.|.. +|+.. ..
T Consensus 63 -----------~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v-~~~~--~~~~~~~lv~AtG~~~~~~~~~g~~~~~ 128 (320)
T 1trb_A 63 -----------LLMERMHEHATKFETEIIFDHINKVDLQNRPFRL-NGDN--GEYTCDALIIATGASARYLGLPSEEAFK 128 (320)
T ss_dssp -----------HHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEE-EESS--CEEEEEEEEECCCEEECCCCCHHHHHTB
T ss_pred -----------HHHHHHHHHHHHCCCEEEEeeeeEEEecCCEEEE-EeCC--CEEEcCEEEECCCCCcCCCCCCChHHhC
Confidence 122333455667789998887766654 34555 4455 578999999999998743 33332 11
Q ss_pred CceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCce
Q 010573 198 EKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
...+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+.+.+++.||+++++++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~ 206 (320)
T 1trb_A 129 GRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRT 206 (320)
T ss_dssp TTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCE
T ss_pred CceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCce
Confidence 22344433333333568999999999999999999999999999999988764 3678888888999999999999999
Q ss_pred EEEEEEcCCeEE-EEEeecCC-CceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCC-----CCCCCCeE
Q 010573 278 VVGVDLSGDGVK-LTLEPAAG-GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF-----ATNIPGVY 350 (507)
Q Consensus 278 v~~i~~~~~~v~-v~~~~~~~-g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~-----~t~~~~Iy 350 (507)
+++++.+++++. +++.+..+ ++.+++++|.||+|+|++|++.++ + .+++++ +|+|.||+++ +|+.|+||
T Consensus 207 v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~--~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vy 282 (320)
T 1trb_A 207 LEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHGNATQTSIPGVF 282 (320)
T ss_dssp EEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGG--T-TTSCEE-TTEECCCCSSSSCTTBCSSTTEE
T ss_pred eEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHh--c-cccccc-CceEEECCCcccccccCCCCCEE
Confidence 999987765543 66653222 445789999999999999999864 3 467778 8999999997 79999999
Q ss_pred EecCCCCC-CCcHhHHHHHHHHHHHHHc
Q 010573 351 AIGDVIPG-PMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 351 A~GD~a~~-~~~~~~A~~~g~~aa~~i~ 377 (507)
|+|||+.. +..+..|..+|+.||.+|.
T Consensus 283 a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 283 AAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp ECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred EcccccCCcchhhhhhhccHHHHHHHHH
Confidence 99999976 4688999999999999986
No 64
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=8.8e-38 Score=305.62 Aligned_cols=292 Identities=20% Similarity=0.250 Sum_probs=220.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
++||+|||||+||+++|..|++.|++|+|||+++.+||.|.+ +.|...+... .+.. ....
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~--~~~~~~~~~~-------------~~~~----~~~~- 66 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA--LYPEKYIYDV-------------AGFP----KIRA- 66 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH--HCTTSEECCS-------------TTCS----SEEH-
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh--cCCCceEecc-------------CCCC----CCCH-
Confidence 479999999999999999999999999999999999997632 2232211000 0000 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--C-EEEEEccCCceEEEEeCeEEEccCC---CCC--CCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--S-EVSVDTIEGGNTVVKGKNIIIATGS---DVK--SLPG 193 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~-~~~v~~~~g~~~~~~~d~lvlAtG~---~p~--~~pg 193 (507)
..+...+.+.+++.+++++.+ .+..++. + .+.+.+.++ . +.||+||+|||+ .|. .+|+
T Consensus 67 ----------~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g--~-~~~d~vVlAtG~~~~~p~~~~~~g 133 (332)
T 3lzw_A 67 ----------QELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEE--T-HYSKTVIITAGNGAFKPRKLELEN 133 (332)
T ss_dssp ----------HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSE--E-EEEEEEEECCTTSCCEECCCCCTT
T ss_pred ----------HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCC--E-EEeCEEEECCCCCcCCCCCCCCCC
Confidence 223344456667778988864 5555543 2 567777766 3 999999999999 663 4455
Q ss_pred Ccc-CCceEecchhhcccc-CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcE
Q 010573 194 ITI-DEKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 271 (507)
Q Consensus 194 ~~~-~~~~~~~~~~~~~~~-~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~ 271 (507)
... .+..+++ ...... ..+++++|||+|.+|+|+|..+.+.+.+|+++++.+++.+ .++. .+.+++.||+
T Consensus 134 ~~~~~g~~~~~--~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-~~~~-----~~~l~~~gv~ 205 (332)
T 3lzw_A 134 AEQYEGKNLHY--FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-HEHS-----VENLHASKVN 205 (332)
T ss_dssp GGGGBTTTEES--SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-CHHH-----HHHHHHSSCE
T ss_pred hhhccCceEEE--ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-cHHH-----HHHHhcCCeE
Confidence 442 2223333 222222 2379999999999999999999999999999999887643 2222 3447889999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEE
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYA 351 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 351 (507)
+++++++++++.+++...+++.+..+++++++++|.|++|+|++|+.++ ++..++++ ++|+|.||+++||+.|||||
T Consensus 206 ~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~~~~~-~~g~i~vd~~~~t~~~~vya 282 (332)
T 3lzw_A 206 VLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGP--IKNWGLDI-EKNSIVVKSTMETNIEGFFA 282 (332)
T ss_dssp EETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGG--GGGSSCCE-ETTEEECCTTSBCSSTTEEE
T ss_pred EEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchH--HhhcCccc-cCCeEEeCCCCceecCCEEE
Confidence 9999999999877666667777655666788999999999999999986 67788888 56899999999999999999
Q ss_pred ecCCC---CCCCcHhHHHHHHHHHHHHHcC
Q 010573 352 IGDVI---PGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 352 ~GD~a---~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+|||+ +.+.++..|..||+.||.+|+.
T Consensus 283 ~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 283 AGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp CGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 99999 5678999999999999999974
No 65
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.7e-37 Score=294.51 Aligned_cols=278 Identities=15% Similarity=0.146 Sum_probs=209.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
++||+|||||+||+++|..|++.|++|+|||++...++.......+|. ....+..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~-------------------------~~~~~~~ 56 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLG-------------------------QDGKAPG 56 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTT-------------------------CTTCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcC-------------------------CCCCCHH
Confidence 379999999999999999999999999999996433321110000000 0011111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc-c
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT-I 196 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~-~ 196 (507)
.+...+.+.+++. +++++.+++..++ .+.+.+.+.++ .++.||+||+|||+.|. .+|+.. .
T Consensus 57 -----------~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vviAtG~~~~~~~~~g~~~~ 123 (297)
T 3fbs_A 57 -----------EIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGG--RRETAGRLILAMGVTDELPEIAGLRER 123 (297)
T ss_dssp -----------HHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCCEEECCCCBTTGGG
T ss_pred -----------HHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCC--CEEEcCEEEECCCCCCCCCCCCCchhh
Confidence 2223334455555 7888888776664 34577887777 67999999999999874 455554 2
Q ss_pred CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 010573 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
....+++..........+++++|||+|.+|+|+|..|.+.| +|+++.+.+. .++ +.+.+.+++.||+++. +
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---~~~----~~~~~~l~~~gv~i~~-~ 194 (297)
T 3fbs_A 124 WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---EPD----ADQHALLAARGVRVET-T 194 (297)
T ss_dssp BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---CCC----HHHHHHHHHTTCEEEC-S
T ss_pred cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---CCC----HHHHHHHHHCCcEEEc-c
Confidence 22345555443344445899999999999999999999999 9999988765 233 3456778899999995 8
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceec--CCC-CeecCCCCCCCCCCeEEec
Q 010573 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD--KMG-RIPVNERFATNIPGVYAIG 353 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~--~~G-~i~Vd~~~~t~~~~IyA~G 353 (507)
++++++.++ .+++. +++++++|.|++|+|++|+.++ ++..+++++ ++| ++.||++++|+.|||||+|
T Consensus 195 ~v~~i~~~~---~v~~~-----~g~~~~~D~vi~a~G~~p~~~~--~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~G 264 (297)
T 3fbs_A 195 RIREIAGHA---DVVLA-----DGRSIALAGLFTQPKLRITVDW--IEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACG 264 (297)
T ss_dssp CEEEEETTE---EEEET-----TSCEEEESEEEECCEEECCCSC--HHHHTCCEEEETTEEEECCCTTCBCSSTTEEECS
T ss_pred eeeeeecCC---eEEeC-----CCCEEEEEEEEEccCcccCchh--HHhcCCccccCCCCceEEeCCCCccCCCCEEEEe
Confidence 999986432 55554 4578999999999999999876 677788776 457 8999999999999999999
Q ss_pred CCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 354 DVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 354 D~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
||++.|..+..|..||+.||.+|.
T Consensus 265 D~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 265 DVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp GGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred ecCCchHHHHHHHHhHHHHHHHHH
Confidence 999989999999999999999986
No 66
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.2e-36 Score=301.17 Aligned_cols=300 Identities=21% Similarity=0.303 Sum_probs=220.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
|+.++||+|||||+||+++|..|++.|++|+|||+++.+||.|.+. .|++.+... .++. .+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~~~~~~-------------~~~~----~~ 71 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL--YPEKHIYDV-------------AGFP----EV 71 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT--CTTSEECCS-------------TTCS----SE
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc--CCCcccccC-------------CCCC----CC
Confidence 3456899999999999999999999999999999998999987532 222211000 0000 01
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC---CEEEEEccCCceEEEEeCeEEEccCCC---CC--C
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSD---VK--S 190 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~---~~~~v~~~~g~~~~~~~d~lvlAtG~~---p~--~ 190 (507)
+.. .+...+.+.+++.+++++.+ .+..++. ..+.+.+.+| ..+.||+||+|||+. |. .
T Consensus 72 ~~~-----------~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g--~~~~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 72 PAI-----------DLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTG--NVYRSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp EHH-----------HHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTS--CEEEEEEEEECCTTCSCCBCCCG
T ss_pred CHH-----------HHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCC--cEEEeeEEEEccCCCcCCCCCCC
Confidence 111 12233345566678888765 4555432 2567777776 679999999999984 32 2
Q ss_pred CCC-Cc-cCCceEecc-hhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh
Q 010573 191 LPG-IT-IDEKRIVSS-TGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267 (507)
Q Consensus 191 ~pg-~~-~~~~~~~~~-~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~ 267 (507)
+|+ .. ..+..++.. .+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+. ++..+.+.+.+++
T Consensus 139 i~g~~~~~~~~~v~~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~ 214 (360)
T 3ab1_A 139 QLGNIDHLTGSSVYYAVKSVE--DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHEVERARAN 214 (360)
T ss_dssp GGCCCTTTBTTTEESSCSCGG--GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHSSHHHHHH
T ss_pred CCCchhhCcCceEEEecCCHH--HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhc
Confidence 344 32 112223221 2221 124799999999999999999999999999999998876543 4566778888889
Q ss_pred cCcEEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCC
Q 010573 268 QKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNI 346 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~ 346 (507)
.||++++++++++++.+++.+ .+.+. ..+|+..++++|.||+|+|++|+.++ ++..+++++ +|+|.||+++||+.
T Consensus 215 ~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~t~~ 290 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIGFKSNLGP--LARWDLELY-ENALVVDSHMKTSV 290 (360)
T ss_dssp TSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCCBCCSCGG--GGGSSCCEE-TTEEECCTTSBCSS
T ss_pred CceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCCCCCCHHH--HHhhccccc-cCeeeecCCCcCCC
Confidence 999999999999998876654 45554 12334478999999999999999876 567788877 68999999999999
Q ss_pred CCeEEecCCCC---CCCcHhHHHHHHHHHHHHHcCC
Q 010573 347 PGVYAIGDVIP---GPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 347 ~~IyA~GD~a~---~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
|+|||+|||+. .+.++..|..||+.||.+|.+.
T Consensus 291 ~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 326 (360)
T 3ab1_A 291 DGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSY 326 (360)
T ss_dssp TTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEecCccCCCCccceeehhHHHHHHHHHHHHhh
Confidence 99999999994 4578999999999999999753
No 67
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-36 Score=297.37 Aligned_cols=295 Identities=23% Similarity=0.328 Sum_probs=214.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
+...+||+|||||+||+++|..|++.|++|+|||+ ..+||.|.....+... . ++. ..+
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~~~----------------~--~~~---~~~ 68 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEG-TSFGGALMTTTDVENY----------------P--GFR---NGI 68 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECC-SSCSCGGGSCSCBCCS----------------T--TCT---TCB
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCceeccchhhhc----------------C--CCC---CCC
Confidence 34568999999999999999999999999999998 4788876543221100 0 000 001
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecC-CEEEE-EccCCceEEEEeCeEEEccCCCCCC--CCCCc
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP-SEVSV-DTIEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~-~~~~v-~~~~g~~~~~~~d~lvlAtG~~p~~--~pg~~ 195 (507)
... .+...+.+.+++.+++++.+++..++. +.+.+ .+.++ ..+.||+||+|||+.|.. +|+..
T Consensus 69 ~~~-----------~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g--~~~~~d~lviAtG~~~~~~~i~g~~ 135 (335)
T 2a87_A 69 TGP-----------ELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADG--QTHRARAVILAMGAAARYLQVPGEQ 135 (335)
T ss_dssp CHH-----------HHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTS--CEEEEEEEEECCCEEECCCCCTHHH
T ss_pred CHH-----------HHHHHHHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCC--CEEEeCEEEECCCCCccCCCCCchH
Confidence 111 122233445666789998887666654 33445 55566 679999999999997743 34432
Q ss_pred -cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEc
Q 010573 196 -IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
.....+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+. .+.+++.||++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--~~~~~---~~~~~~~gV~v~~ 210 (335)
T 2a87_A 136 ELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--SKIML---DRARNNDKIRFLT 210 (335)
T ss_dssp HTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--CTTHH---HHHHHCTTEEEEC
T ss_pred hccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--cHHHH---HHHhccCCcEEEe
Confidence 11233444433333334689999999999999999999999999999999887642 22221 2445678999999
Q ss_pred CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCC-CCCCCCCeEEec
Q 010573 275 KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-FATNIPGVYAIG 353 (507)
Q Consensus 275 ~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~-~~t~~~~IyA~G 353 (507)
++++++++.+++...+.+.+..+++.+++++|.|++|+|++|+++++ + .+++++++|+|.||++ ++|+.|+|||+|
T Consensus 211 ~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~t~~~~iya~G 287 (335)
T 2a87_A 211 NHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV--R-EAIDVDPDGYVLVQGRTTSTSLPGVFAAG 287 (335)
T ss_dssp SEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTT--B-TTBCBCTTSCBCCSTTSSBCSSTTEEECG
T ss_pred CceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHh--h-cccccCCCccEEeCCCCCccCCCCEEEee
Confidence 99999998665433455543334455789999999999999999864 3 4688888899999996 689999999999
Q ss_pred CCCCC-CCcHhHHHHHHHHHHHHHc
Q 010573 354 DVIPG-PMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 354 D~a~~-~~~~~~A~~~g~~aa~~i~ 377 (507)
||++. +..+..|..+|+.||.+|.
T Consensus 288 D~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 288 DLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp GGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred ecCCccHHHHHHHHHhHHHHHHHHH
Confidence 99976 4688999999999999986
No 68
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=9e-36 Score=307.66 Aligned_cols=291 Identities=25% Similarity=0.384 Sum_probs=221.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...+||+||||||||++||.+|++.|++|+|||+ .+||+|.....++... +.. ...
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~~~~~------------------~~~----~~~ 265 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDIENYI------------------SVP----KTE 265 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCBCCBT------------------TBS----SBC
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccccccccC------------------CCC----CCC
Confidence 3568999999999999999999999999999986 5788876543332100 000 011
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCC-----EEEEEccCCceEEEEeCeEEEccCCCCC--CCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPS-----EVSVDTIEGGNTVVKGKNIIIATGSDVK--SLP 192 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~-----~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~p 192 (507)
. ..+...+...+++.+++++.+ .+..++.. .+.+.+.+| ..+.||+||+|||++|. .+|
T Consensus 266 ~-----------~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g--~~~~~d~vVlAtG~~~~~~~ip 332 (521)
T 1hyu_A 266 G-----------QKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG--AVLKARSIIIATGAKWRNMNVP 332 (521)
T ss_dssp H-----------HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS--CEEEEEEEEECCCEEECCCCCT
T ss_pred H-----------HHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC--CEEEcCEEEECCCCCcCCCCCC
Confidence 1 122334455667789999988 67777532 577777777 67999999999998774 455
Q ss_pred CCc-cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh-cCc
Q 010573 193 GIT-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKM 270 (507)
Q Consensus 193 g~~-~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~-~Gv 270 (507)
|.. .....++.+.........+++++|||+|.+|+|+|..|++.|.+|+++++.+.+.. + ..+.+.+++ .||
T Consensus 333 G~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV 406 (521)
T 1hyu_A 333 GEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQDKVRSLKNV 406 (521)
T ss_dssp TTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHHHHHTTCTTE
T ss_pred ChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHHHHHhcCCCc
Confidence 543 22233444333322234589999999999999999999999999999999887653 3 335566666 699
Q ss_pred EEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCe
Q 010573 271 KFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGV 349 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~I 349 (507)
++++++.++++..+++++ .+.+.+..+|+..++++|.|++++|++|+++++ +. .++++++|+|.||++++|++|||
T Consensus 407 ~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l--~~-~l~~~~~G~I~Vd~~~~ts~p~V 483 (521)
T 1hyu_A 407 DIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWL--EG-ALERNRMGEIIIDAKCETSVKGV 483 (521)
T ss_dssp EEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGG--TT-TSCBCTTSCBCCCTTCBCSSTTE
T ss_pred EEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHH--hh-hhccCCCCcEEeCCCCCCCCCCE
Confidence 999999999998766555 466665444555689999999999999999874 33 47888889999999999999999
Q ss_pred EEecCCCCCC-CcHhHHHHHHHHHHHHHc
Q 010573 350 YAIGDVIPGP-MLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 350 yA~GD~a~~~-~~~~~A~~~g~~aa~~i~ 377 (507)
||+|||+..+ ..+..|+.+|+.||.++.
T Consensus 484 fA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 484 FAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp EECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 9999999865 578999999999999986
No 69
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=6.1e-36 Score=292.79 Aligned_cols=293 Identities=23% Similarity=0.255 Sum_probs=213.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEec----CCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK----RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~----~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (507)
++||+|||||++|+++|..|++.|++|+|||+ ....||.+.....+.. +. ++. ..
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~----------------~~--~~~---~~ 66 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVEN----------------FP--GFP---EG 66 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECC----------------ST--TCT---TC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecccccc----------------CC--CCc---cC
Confidence 47999999999999999999999999999998 5567776544321100 00 000 00
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecC--CEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCC
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISP--SEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGI 194 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~--~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~ 194 (507)
++.. .+...+.+.+++.+++++.+++..++. +.+.+.+ ++ ..+.||+||+|||+.|. .+|+.
T Consensus 67 ~~~~-----------~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~--~~~~~~~vv~A~G~~~~~~~~~g~ 132 (333)
T 1vdc_A 67 ILGV-----------ELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DS--KAILADAVILAIGAVAKRLSFVGS 132 (333)
T ss_dssp EEHH-----------HHHHHHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SS--EEEEEEEEEECCCEEECCCCCBTC
T ss_pred CCHH-----------HHHHHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CC--cEEEcCEEEECCCCCcCCCCCCCc
Confidence 1111 122333455667789998887655543 3456666 55 78999999999999874 34444
Q ss_pred ccC-----CceEecchhhcccc--CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHh
Q 010573 195 TID-----EKRIVSSTGALALN--EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 267 (507)
Q Consensus 195 ~~~-----~~~~~~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~ 267 (507)
... ...+++........ ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..+.+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~~---~~~~~~~ 207 (333)
T 1vdc_A 133 GEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--SKIM---QQRALSN 207 (333)
T ss_dssp SSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HHHHHTC
T ss_pred cccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--cHHH---HHHHHhC
Confidence 320 12333333322222 4589999999999999999999999999999999886532 2222 2244577
Q ss_pred cCcEEEcCceEEEEEEcCC--eE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCC-CC
Q 010573 268 QKMKFMLKTKVVGVDLSGD--GV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-FA 343 (507)
Q Consensus 268 ~Gv~i~~~~~v~~i~~~~~--~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~-~~ 343 (507)
.||++++++++++++.+++ .+ .+.+.+..+++.+++++|.|++|+|++|++.++ + .+++++++|+|.||++ ++
T Consensus 208 ~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~ 284 (333)
T 1vdc_A 208 PKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL--D-GGVELDSDGYVVTKPGTTQ 284 (333)
T ss_dssp TTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCBCCCTTSCB
T ss_pred CCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh--h-ccccccCCCCEEechhhcc
Confidence 8999999999999987664 43 366654334555789999999999999999864 3 4688888899999997 58
Q ss_pred CCCCCeEEecCCCCC-CCcHhHHHHHHHHHHHHHcC
Q 010573 344 TNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 344 t~~~~IyA~GD~a~~-~~~~~~A~~~g~~aa~~i~~ 378 (507)
|+.|+|||+|||+.. +..+..|..+|+.||.+|..
T Consensus 285 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 285 TSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHH
Confidence 999999999999976 46899999999999999863
No 70
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2.5e-36 Score=333.96 Aligned_cols=310 Identities=19% Similarity=0.196 Sum_probs=221.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+||+||||||||++||.+|++.|+ +|+|||+++.+||.+. .++|...+ .
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~--~~ip~~~~--------------------------~ 237 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST--SEIPQFRL--------------------------P 237 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH--HTSCTTTS--------------------------C
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc--ccCCcccC--------------------------C
Confidence 46899999999999999999999999 7999999888999642 22332110 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CCCCC---CCcc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VKSLP---GITI 196 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~~~p---g~~~ 196 (507)
.. +..+..+++++.+|+++.+.... .+. +.+.++ ..+.||+||||||+. |..+| |...
T Consensus 238 -~~-----------~~~~~~~~~~~~gv~~~~~~~v~--~~~--v~~~~~--~~~~~d~vvlAtGa~~p~~l~~~~G~~~ 299 (1025)
T 1gte_A 238 -YD-----------VVNFEIELMKDLGVKIICGKSLS--ENE--ITLNTL--KEEGYKAAFIGIGLPEPKTDDIFQGLTQ 299 (1025)
T ss_dssp -HH-----------HHHHHHHHHHTTTCEEEESCCBS--TTS--BCHHHH--HHTTCCEEEECCCCCEECCCGGGTTCCT
T ss_pred -HH-----------HHHHHHHHHHHCCcEEEcccEec--cce--EEhhhc--CccCCCEEEEecCCCCCCCCCCCCCCCC
Confidence 00 11112356677899998876432 111 233333 346799999999994 65443 4331
Q ss_pred CCceEecchhhcc----------------ccCCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccC-ccCCCCCHHHH
Q 010573 197 DEKRIVSSTGALA----------------LNEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAA-DIVPSMDGEIR 258 (507)
Q Consensus 197 ~~~~~~~~~~~~~----------------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~-~~~~~~d~~~~ 258 (507)
...+++..+++. +...+++|+|||+|.+|+|+|..+.++|. +||++++.+ .+++.+++++
T Consensus 300 -~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~- 377 (1025)
T 1gte_A 300 -DQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV- 377 (1025)
T ss_dssp -TTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-
T ss_pred -CCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-
Confidence 234666655442 12347899999999999999999999996 899999988 4577776664
Q ss_pred HHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEee---cCC-------CceEEEEcCEEEEeecCCCCCCCCCCcc-c
Q 010573 259 KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEP---AAG-------GEKTILEADVVLVSAGRTPFTAGLGLDK-I 326 (507)
Q Consensus 259 ~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~---~~~-------g~~~~i~~D~vi~a~G~~p~~~~l~~~~-~ 326 (507)
+.+++.||++++++.++++..+++.+. +++.. .++ ++..++++|.||+|+|++|+...+ ++. .
T Consensus 378 ----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l-~~~~~ 452 (1025)
T 1gte_A 378 ----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKV-KEALS 452 (1025)
T ss_dssp ----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHH-HHHTT
T ss_pred ----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhh-hhccc
Confidence 356778999999999999987655543 44431 111 223579999999999998754333 333 5
Q ss_pred CceecCCCCeecCC-CCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC---CCCCCCCccEEEEcCCCeeeec
Q 010573 327 GVETDKMGRIPVNE-RFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH---GHVDYDKVPGVVYTHPEVASVG 402 (507)
Q Consensus 327 gl~~~~~G~i~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~~~~~vG 402 (507)
|++++++|+|.||+ ++||+.|+|||+|||+..+.++..|+.||+.||.+|.+.. ...++...|.+.|+.|+++.++
T Consensus 453 gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ 532 (1025)
T 1gte_A 453 PIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVD 532 (1025)
T ss_dssp TSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCC
T ss_pred CceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccccccccc
Confidence 88999889999997 8999999999999999989999999999999999997421 1134444555556666555554
Q ss_pred CC
Q 010573 403 KT 404 (507)
Q Consensus 403 ~~ 404 (507)
++
T Consensus 533 ls 534 (1025)
T 1gte_A 533 IS 534 (1025)
T ss_dssp CC
T ss_pred ce
Confidence 43
No 71
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=9.4e-36 Score=301.17 Aligned_cols=282 Identities=24% Similarity=0.315 Sum_probs=204.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
...+||+||||||||++||..|++.|++|+|||+.+.+||.+.+ .+|... .+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~--gip~~~--------------------------~~ 171 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVY--GIPGFK--------------------------LE 171 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHH--TSCTTT--------------------------SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeee--cCCCcc--------------------------CC
Confidence 35689999999999999999999999999999998889986422 122110 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC-C--CCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV-K--SLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p-~--~~pg~~~~ 197 (507)
. .+.....+++++.+++++.+... . . .+.++++ .+.||+||||||+.+ . .+||..
T Consensus 172 -~-----------~~~~~~~~~l~~~gv~~~~~~~v--~-~--~v~~~~~---~~~~d~vvlAtG~~~~~~~~ipG~~-- 229 (456)
T 2vdc_G 172 -K-----------SVVERRVKLLADAGVIYHPNFEV--G-R--DASLPEL---RRKHVAVLVATGVYKARDIKAPGSG-- 229 (456)
T ss_dssp -H-----------HHHHHHHHHHHHTTCEEETTCCB--T-T--TBCHHHH---HSSCSEEEECCCCCEECCTTCSCCT--
T ss_pred -H-----------HHHHHHHHHHHHCCcEEEeCCEe--c-c--EEEhhHh---HhhCCEEEEecCCCCCCCCCCCCCc--
Confidence 0 01112235566778888776532 1 1 1222222 256999999999973 2 455543
Q ss_pred CceEecchhhcc------------------ccCCCCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCcc-CCCCCHHH
Q 010573 198 EKRIVSSTGALA------------------LNEVPKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI-VPSMDGEI 257 (507)
Q Consensus 198 ~~~~~~~~~~~~------------------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~-~~~~d~~~ 257 (507)
...+++..+++. ....+++|+|||+|.+|+|+|..+.+.|. +|++++|++.. ++..+.+
T Consensus 230 ~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e- 308 (456)
T 2vdc_G 230 LGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQRE- 308 (456)
T ss_dssp TTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHH-
T ss_pred CCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHH-
Confidence 233444332211 12458999999999999999999999998 59999998876 6655544
Q ss_pred HHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEee------cC---------CCceEEEEcCEEEEeecCCCCCCCC
Q 010573 258 RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEP------AA---------GGEKTILEADVVLVSAGRTPFTAGL 321 (507)
Q Consensus 258 ~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~------~~---------~g~~~~i~~D~vi~a~G~~p~~~~l 321 (507)
.+.+++.||++++++.++++..+ +.+. +++.. .. +++..++++|.||+|+|+.|+...+
T Consensus 309 ----~~~~~~~Gv~~~~~~~~~~i~~~-g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~ 383 (456)
T 2vdc_G 309 ----VAHAEEEGVEFIWQAAPEGFTGD-TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPN 383 (456)
T ss_dssp ----HHHHHHTTCEEECCSSSCCEEEE-EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHH
T ss_pred ----HHHHHHCCCEEEeCCCceEEeCC-CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchh
Confidence 24567789999999999888753 2221 22211 01 2334689999999999999987521
Q ss_pred CCcccCceecCCCCeecCCC-CCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 322 GLDKIGVETDKMGRIPVNER-FATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 322 ~~~~~gl~~~~~G~i~Vd~~-~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
.++..+++++++|+|.||++ ++|+.|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 384 ~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 384 AFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp HHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHH
T ss_pred hcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHH
Confidence 15677899999999999998 9999999999999999999999999999999999864
No 72
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.2e-34 Score=285.85 Aligned_cols=311 Identities=14% Similarity=0.198 Sum_probs=212.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-cEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCc-ccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGV-KFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~ 120 (507)
++||+|||||+||+++|.+|++.|+ +|+|||+++ +||.|.++..... +..... ....+++ .......+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~--~~~~~~-------~~~~~g~~~~~~~~~~ 73 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTR--TITPSF-------TSNGFGMPDMNAISMD 73 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCB--CSSCCC-------CCGGGTCCCTTCSSTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccccc--ccCcch-------hcccCCchhhhhcccc
Confidence 4799999999999999999999999 999999987 9998865432100 000000 0001111 00000011
Q ss_pred hHHHHHHHHH--HHHHHHHHHHHHHHhCCcEEEEeE-EEEecCC--EEEEEccCCceEEEEeCeEEEccCCCCC-CCCCC
Q 010573 121 LPAMMAQKDK--AVSNLTRGIEGLFKKNKVTYVKGY-GKFISPS--EVSVDTIEGGNTVVKGKNIIIATGSDVK-SLPGI 194 (507)
Q Consensus 121 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~--~~~v~~~~g~~~~~~~d~lvlAtG~~p~-~~pg~ 194 (507)
+......... ....+...+....++.+++++.+. +..++.+ .+.|.+.++ .+.||+||+|||+.+. .+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~~~d~vVlAtG~~~~p~ip~- 149 (369)
T 3d1c_A 74 TSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE---TYHADYIFVATGDYNFPKKPF- 149 (369)
T ss_dssp CCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC---CEEEEEEEECCCSTTSBCCCS-
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC---EEEeCEEEECCCCCCccCCCC-
Confidence 1000000000 012233344556677899988774 5555433 566766655 4899999999999763 4444
Q ss_pred ccCCceEecchhhccccC-CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-------CCCHHHHHHHHHHHH
Q 010573 195 TIDEKRIVSSTGALALNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-------SMDGEIRKQFQRSLE 266 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~-~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~~d~~~~~~~~~~l~ 266 (507)
..+++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .+++...+.+.+.++
T Consensus 150 ----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~ 225 (369)
T 3d1c_A 150 ----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIK 225 (369)
T ss_dssp ----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHH
T ss_pred ----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHh
Confidence 12333444433333 357999999999999999999999999999999887763 256777888999999
Q ss_pred hcC-cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEE-EcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCC-CC
Q 010573 267 KQK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-FA 343 (507)
Q Consensus 267 ~~G-v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i-~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~-~~ 343 (507)
+.| |++++++.|.+++.+++.+.+++. +++++ .+|.||+|+|++|+++++ ...+++ +++|++.||++ ++
T Consensus 226 ~~g~v~~~~~~~v~~i~~~~~~~~v~~~-----~g~~~~~~d~vi~a~G~~~~~~~~--~~~~~~-~~~g~i~v~~~~~~ 297 (369)
T 3d1c_A 226 QGARIEMNVHYTVKDIDFNNGQYHISFD-----SGQSVHTPHEPILATGFDATKNPI--VQQLFV-TTNQDIKLTTHDES 297 (369)
T ss_dssp TTCCEEEECSCCEEEEEEETTEEEEEES-----SSCCEEESSCCEECCCBCGGGSHH--HHHHSC-CTTSCCCBCTTSBB
T ss_pred hCCcEEEecCcEEEEEEecCCceEEEec-----CCeEeccCCceEEeeccCCccchh--hhhhcc-CCCCCEEechhhcc
Confidence 997 999999999999876777777764 33445 469999999999999653 344466 67788999986 56
Q ss_pred CCCCCeEEecCCCCCCC----cHhHHHHHHHHHHHHHcCC
Q 010573 344 TNIPGVYAIGDVIPGPM----LAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 344 t~~~~IyA~GD~a~~~~----~~~~A~~~g~~aa~~i~~~ 379 (507)
|+.|+|||+|||+..+. ....+..||+.+|++|.+.
T Consensus 298 t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~ 337 (369)
T 3d1c_A 298 TRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQR 337 (369)
T ss_dssp SSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHH
T ss_pred cCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcc
Confidence 99999999999996533 2456788999999999865
No 73
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=6.1e-34 Score=281.11 Aligned_cols=303 Identities=16% Similarity=0.177 Sum_probs=203.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
++||+|||||++|+++|..|++.|++|+|||+++.+||.|.+ +.|...+...... ..+ .+.........+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~--~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~ 73 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH--AWHSLHLFSPAGW-----SSI--PGWPMPASQGPYP 73 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG--SCTTCBCSSCGGG-----SCC--SSSCCCCCSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC--CCCCcEecCchhh-----hhC--CCCCCCCCccCCC
Confidence 479999999999999999999999999999999999998865 2332222111110 000 1111110000110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEe--cCCEEE-EEccCCceEEEEeCeEEEccCC--CC--CCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVS-VDTIEGGNTVVKGKNIIIATGS--DV--KSLPGI 194 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--d~~~~~-v~~~~g~~~~~~~d~lvlAtG~--~p--~~~pg~ 194 (507)
. ...+...+....++.+++++.+ ++..+ +.+.+. +.+.++ ++.||+||+|||. .| +.+|+.
T Consensus 74 ~--------~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vV~AtG~~~~~~~~~~~g~ 142 (357)
T 4a9w_A 74 A--------RAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR---QWLARAVISATGTWGEAYTPEYQGL 142 (357)
T ss_dssp B--------HHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC---EEEEEEEEECCCSGGGBCCCCCTTG
T ss_pred C--------HHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC---EEEeCEEEECCCCCCCCCCCCCCCc
Confidence 0 1223344456667778888776 44443 455666 777665 7899999999995 44 345555
Q ss_pred ccCCceEecchhh-ccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc-CccCCCC--CHHHHHHHHHHHH----
Q 010573 195 TIDEKRIVSSTGA-LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA-ADIVPSM--DGEIRKQFQRSLE---- 266 (507)
Q Consensus 195 ~~~~~~~~~~~~~-~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~~~~~--d~~~~~~~~~~l~---- 266 (507)
........+..+. ......+++++|||+|.+|+|+|..|.+.| +|+++.+. +.+++.. ...+.+.+.+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (357)
T 4a9w_A 143 ESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQE 221 (357)
T ss_dssp GGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------
T ss_pred cccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhcccc
Confidence 4222223333332 223345799999999999999999999998 69999887 4555532 3444433333332
Q ss_pred ------------------------hcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCC
Q 010573 267 ------------------------KQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLG 322 (507)
Q Consensus 267 ------------------------~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~ 322 (507)
+.|+ +..+..+.+++ .++ +.+. +++++++|.|++|+|++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~--~~~--v~~~-----~g~~i~~D~vi~a~G~~p~~~~-- 289 (357)
T 4a9w_A 222 GREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFS--PTG--MQWA-----DGTERAFDAVIWCTGFRPALSH-- 289 (357)
T ss_dssp ------------CBCCCHHHHHHHHTTC-CCEECCCSEEE--TTE--EECT-----TSCEEECSEEEECCCBCCCCGG--
T ss_pred ccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEe--CCe--eEEC-----CCCEecCCEEEECCCcCCCCcc--
Confidence 3343 44455555553 233 3332 5678999999999999999887
Q ss_pred CcccCceecCCCCeecCCC--CCCCCCCeEEec--CCCC-CCCcHhHHHHHHHHHHHHHcCC
Q 010573 323 LDKIGVETDKMGRIPVNER--FATNIPGVYAIG--DVIP-GPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 323 ~~~~gl~~~~~G~i~Vd~~--~~t~~~~IyA~G--D~a~-~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
++..++. +++|+|.||++ ++|+.|||||+| ||+. .+.....|..||+.+|.+|...
T Consensus 290 l~~~gl~-~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 290 LKGLDLV-TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp GTTTTCB-CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHH
T ss_pred cCccccc-CCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHH
Confidence 5778888 78899999999 889999999999 5665 4567788999999999999743
No 74
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3.3e-34 Score=289.56 Aligned_cols=287 Identities=22% Similarity=0.272 Sum_probs=204.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
.+|||||||+||++||.+|++.+ ++|+|||+++...- .|. ++ ++....+..++...+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~-------~p~--------l~-----~v~~g~~~~~~i~~~~ 62 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF-------TPA--------FP-----HLAMGWRKFEDISVPL 62 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC-------GGG--------HH-----HHHHTCSCGGGSEEES
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCcc-------Ccc--------HH-----HHhcCCCCHHHhhhcH
Confidence 37999999999999999999864 79999999653211 111 00 1111222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC-CCCCCCccCCce
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV-KSLPGITIDEKR 200 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p-~~~pg~~~~~~~ 200 (507)
..++++.+|+++.+++..+|++..+|.+++| +++.||+||||||+++ +.+||.......
T Consensus 63 ------------------~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g--~~i~YD~LViAtG~~~~~~i~G~~e~~~~ 122 (430)
T 3hyw_A 63 ------------------APLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLVFGAEGQEENSTS 122 (430)
T ss_dssp ------------------TTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEECCSBTHHHHSCC
T ss_pred ------------------HHHHHHCCcEEEEeEEEEEECCCCEEEECCC--CEEECCEEEEeCCCCccCCccCcccCcCC
Confidence 2456677999999999999998888999888 7899999999999976 345665433344
Q ss_pred EecchhhccccC------CCCeEEEEcCcH------HHHHHH----HHHHhcC----CeeEEEcccCccC---CCCCHHH
Q 010573 201 IVSSTGALALNE------VPKKLVVIGAGY------IGLEMG----SVWARLG----SEVTVVEFAADIV---PSMDGEI 257 (507)
Q Consensus 201 ~~~~~~~~~~~~------~~~~vvVvG~G~------~g~e~A----~~l~~~g----~~Vtlv~~~~~~~---~~~d~~~ 257 (507)
+.+.+++..+.+ ..+.++|+|++. .+.|++ ..+.+.| .+|++++..+.+. +..++..
T Consensus 123 ~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~ 202 (430)
T 3hyw_A 123 ICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGAS 202 (430)
T ss_dssp CSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTH
T ss_pred cccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHH
Confidence 556666544321 134455555542 233443 3445554 4788888776543 3456778
Q ss_pred HHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccC--ceecCCCC
Q 010573 258 RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIG--VETDKMGR 335 (507)
Q Consensus 258 ~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~g--l~~~~~G~ 335 (507)
.+.+++.++++||++++++.|++++ ++++.+.. .+++++++++|.+++++|.+|+.. +...+ +..+.+|.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~---~~g~~~~i~~d~vi~~~G~~~~~~---~~~~~~~l~~~~~g~ 274 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE--PDKVIYED---LNGNTHEVPAKFTMFMPSFQGPEV---VASAGDKVANPANKM 274 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEEC---TTSCEEEEECSEEEEECEEECCHH---HHTTCTTTBCTTTCC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEe---eCCCceEeecceEEEeccCCCchH---HHhcccccccCCceE
Confidence 8889999999999999999999994 45544432 245677999999999999999753 23333 44556678
Q ss_pred eecCCCCC-CCCCCeEEecCCCCC------------CCcHhHHHHHHHHHHHHHcC
Q 010573 336 IPVNERFA-TNIPGVYAIGDVIPG------------PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 336 i~Vd~~~~-t~~~~IyA~GD~a~~------------~~~~~~A~~~g~~aa~~i~~ 378 (507)
|.||++|| |++|||||+|||+.. |+.++.|.+||+.+|+||+.
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 99999999 899999999999953 45788999999999999973
No 75
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=5.2e-34 Score=289.03 Aligned_cols=289 Identities=20% Similarity=0.245 Sum_probs=208.8
Q ss_pred CCcEEEECCChHHHHHHHHHHH---CCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~---~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
++||+|||||+||+++|..|++ .|++|+|||+++.+.. .|... . +......
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~~~~~--------~-----~~~g~~~------ 57 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------VPSNP--------W-----VGVGWKE------ 57 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------GGGHH--------H-----HHHTSSC------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------cCCcc--------c-----cccCccC------
Confidence 5799999999999999999999 7999999999653211 11110 0 0000000
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCccC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITID 197 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~~ 197 (507)
.+.+...+.+++++.+++++.+.+..++.+...|.+.++ .++.||+||+|||++|. .+||....
T Consensus 58 ------------~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g--~~i~~d~lviAtG~~~~~~~ipG~~~~ 123 (437)
T 3sx6_A 58 ------------RDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADG--NTVHYDYLMIATGPKLAFENVPGSDPH 123 (437)
T ss_dssp ------------HHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCCEECGGGSTTCSTT
T ss_pred ------------HHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCC--CEEECCEEEECCCCCcCcccCCCCCcc
Confidence 011222234567778999998888888887667887777 67999999999999884 56776532
Q ss_pred Cc---eEecchhhccccC------CCCeEEEEcCcHH----H--HHHH----HHHHhcCCe-----eEEEcccCccC---
Q 010573 198 EK---RIVSSTGALALNE------VPKKLVVIGAGYI----G--LEMG----SVWARLGSE-----VTVVEFAADIV--- 250 (507)
Q Consensus 198 ~~---~~~~~~~~~~~~~------~~~~vvVvG~G~~----g--~e~A----~~l~~~g~~-----Vtlv~~~~~~~--- 250 (507)
.. .+.+..++..+.. .+++++|||+|.. | +|+| ..+.+.|.+ |+++++.+.+.
T Consensus 124 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~ 203 (437)
T 3sx6_A 124 EGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLG 203 (437)
T ss_dssp TSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTT
T ss_pred cCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccc
Confidence 11 3445555543321 1456788898654 3 7777 666677864 99999988763
Q ss_pred -CCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCc---eEEEEcCEEEEeecCCCCCCCCCCccc
Q 010573 251 -PSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGE---KTILEADVVLVSAGRTPFTAGLGLDKI 326 (507)
Q Consensus 251 -~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~---~~~i~~D~vi~a~G~~p~~~~l~~~~~ 326 (507)
+.+ ++....+++.+++.||++++++.|++++ ++++.+.... .+++ ++++++|.+++++|+.|+... .+..
T Consensus 204 l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~-~~g~~~~~~~i~~D~vv~~~g~~~~~~~--~~~~ 277 (437)
T 3sx6_A 204 IQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVD-EKGETIKEMVLPVKFGMMIPAFKGVPAV--AGVE 277 (437)
T ss_dssp TTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEEEC-TTSCEEEEEEEECSEEEEECCEECCHHH--HTST
T ss_pred cCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecc-cCCccccceEEEEeEEEEcCCCcCchhh--hccc
Confidence 223 3578889999999999999999999995 4455544211 1222 678999999999998887543 2334
Q ss_pred CceecCCCCeecCCCCCC-CCCCeEEecCCCCC------------CCcHhHHHHHHHHHHHHHcC
Q 010573 327 GVETDKMGRIPVNERFAT-NIPGVYAIGDVIPG------------PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 327 gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~a~~------------~~~~~~A~~~g~~aa~~i~~ 378 (507)
++ .+++|+|.||+++|| +.|||||+|||+.. |..+..|..||+.||+||..
T Consensus 278 gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 278 GL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp TT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 66 577899999999998 99999999999963 56899999999999999973
No 76
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=1.8e-33 Score=300.15 Aligned_cols=296 Identities=21% Similarity=0.229 Sum_probs=218.4
Q ss_pred hccccccccccceeeeeeccccccCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhh
Q 010573 14 LSRNLSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKAL 93 (507)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~ 93 (507)
...|..||..+++....+.+.. ..+....+||+|||||+||++||..|++.|++|+|||+++.+||++....++|.+..
T Consensus 363 ~~~C~vnp~~g~e~~~~~~~~~-~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~ 441 (690)
T 3k30_A 363 PIRCTQNPSMGEEWRRGWHPER-IRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSA 441 (690)
T ss_dssp CCCCSSCTTTTTTTTTCCCSSC-CCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGG
T ss_pred cccCCcCcccCcccccccCccc-cCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhH
Confidence 3468999999998765443332 345566789999999999999999999999999999999999998765544443210
Q ss_pred hhhhHHHHHHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEecCCEEEEEccCCce
Q 010573 94 LHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGN 172 (507)
Q Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~d~~~~~v~~~~g~~ 172 (507)
+.. +..++...+++. ++++..++. +...++
T Consensus 442 ---------------------------~~~-----------~~~~~~~~~~~~~gv~~~~~~~---------v~~~~~-- 472 (690)
T 3k30_A 442 ---------------------------WGR-----------VKEYREAVLAELPNVEIYRESP---------MTGDDI-- 472 (690)
T ss_dssp ---------------------------GGH-----------HHHHHHHHHHTCTTEEEESSCC---------CCHHHH--
T ss_pred ---------------------------HHH-----------HHHHHHHHHHHcCCCEEEECCe---------ecHHHH--
Confidence 111 112223444554 777765532 122222
Q ss_pred EEEEeCeEEEccCCCCC----------CCCCCccCCceEecchhhcccc-CCCCeEEEEc--CcHHHHHHHHHHHhcCCe
Q 010573 173 TVVKGKNIIIATGSDVK----------SLPGITIDEKRIVSSTGALALN-EVPKKLVVIG--AGYIGLEMGSVWARLGSE 239 (507)
Q Consensus 173 ~~~~~d~lvlAtG~~p~----------~~pg~~~~~~~~~~~~~~~~~~-~~~~~vvVvG--~G~~g~e~A~~l~~~g~~ 239 (507)
..+.||+||+|||+.|. .+|+. +...+++..+.+... ..+++++||| +|.+|+|+|..|.+.|.+
T Consensus 473 ~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~--~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~ 550 (690)
T 3k30_A 473 VEFGFEHVITATGATWRTDGVARFHTTALPIA--EGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYE 550 (690)
T ss_dssp HHTTCCEEEECCCEEECSSCCSSSCSSCCCBC--TTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCE
T ss_pred hhcCCCEEEEcCCCccccccccccCCCCCCCC--CCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCe
Confidence 45789999999999842 23443 345677777766543 3467899999 999999999999999999
Q ss_pred eEEEcccCccCCCCC-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 240 VTVVEFAADIVPSMD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 240 Vtlv~~~~~~~~~~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
|+++++.+.+++..+ +.....+.+.+++.||+++++++|++++ ++++.+.. ..+++++++++|.||+|+|++|++
T Consensus 551 Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~--~~~~~v~~--~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 551 VSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVG--AGGVTVRD--TYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEE--TTEEEEEE--TTTCCEEEEECSEEEEESCEEECC
T ss_pred eEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEE--CCeEEEEE--ccCCeEEEEECCEEEECCCCCCCh
Confidence 999999988776443 5567778899999999999999999996 34444443 234467789999999999999998
Q ss_pred CCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCC
Q 010573 319 AGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 319 ~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
.+ ++..+.. +. +|+.|+|||+|||++.+ ....|+.||+.||.||.+.
T Consensus 627 ~l--~~~l~~~----~~-------~t~~~~VyaiGD~~~~~-~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 627 EL--YLDLVAR----RD-------AGEIASVRGIGDAWAPG-TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp HH--HHHHHHH----HH-------HTSCSEEEECGGGTSCB-CHHHHHHHHHHHHHHTTCC
T ss_pred HH--HHHHhhh----hc-------ccCCCCEEEEeCCCchh-hHHHHHHHHHHHHHHHHhh
Confidence 75 2332211 11 78999999999999765 4555999999999999876
No 77
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=7.7e-33 Score=278.39 Aligned_cols=284 Identities=19% Similarity=0.210 Sum_probs=208.5
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~---~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
+||+|||||+||+++|..|++ .|++|+|||+++.++... +.+. .........+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~----~~~~----------------~~~~~~~~~~~--- 58 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRP----ALPH----------------VAIGVRDVDEL--- 58 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECC----SSCC----------------CCSSCCCCCCE---
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceecc----chhh----------------cccCCcCHHHH---
Confidence 589999999999999999999 899999999976543221 1110 00000001111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCC--ceEEEEeCeEEEccCCCCC--CCCCCcc
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG--GNTVVKGKNIIIATGSDVK--SLPGITI 196 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g--~~~~~~~d~lvlAtG~~p~--~~pg~~~ 196 (507)
...+.+.+++.+++++.+++..++.+...|.+.++ +..++.||+||+|||++|. .+||...
T Consensus 59 ---------------~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~ 123 (409)
T 3h8l_A 59 ---------------KVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDK 123 (409)
T ss_dssp ---------------EEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHH
T ss_pred ---------------HHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhh
Confidence 11124556677999999988888766445554444 3456999999999999874 3566543
Q ss_pred CCceEecchhhcccc----CCCCeEEEEcCcH-------------------------HHHHHH----HHHHhcCC----e
Q 010573 197 DEKRIVSSTGALALN----EVPKKLVVIGAGY-------------------------IGLEMG----SVWARLGS----E 239 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~----~~~~~vvVvG~G~-------------------------~g~e~A----~~l~~~g~----~ 239 (507)
....+.+..+...+. ...++++|||+|. .++|+| ..+.+.|. +
T Consensus 124 ~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~ 203 (409)
T 3h8l_A 124 YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVH 203 (409)
T ss_dssp HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEE
T ss_pred cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeE
Confidence 223344444444332 2236677999992 466766 45667774 8
Q ss_pred eEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 240 VTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 240 Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
|+++++.+ +++.+++++.+.+.+.+++.||+++++++|++++. ++ ++++ +++++++|.|++++|++|+..
T Consensus 204 v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~--v~~~-----~g~~~~~D~vi~a~G~~~~~~ 273 (409)
T 3h8l_A 204 VTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE--IVDE-----KGNTIPADITILLPPYTGNPA 273 (409)
T ss_dssp EEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECS--SE--EEET-----TSCEEECSEEEEECCEECCHH
T ss_pred EEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce--EEEC-----CCCEEeeeEEEECCCCCccHH
Confidence 99999988 78888999999999999999999999999999953 34 4443 567899999999999999853
Q ss_pred CCCCccc--CceecCCCCeecCCCCCC-CCCCeEEecCCCC--CCCcHhHHHHHHHHHHHHHcCC
Q 010573 320 GLGLDKI--GVETDKMGRIPVNERFAT-NIPGVYAIGDVIP--GPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 320 ~l~~~~~--gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~a~--~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
++.. ++ .+++|+|.||+++|| +.|||||+|||+. .+.++..|..||+.||+||.+.
T Consensus 274 ---l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 274 ---LKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp ---HHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4555 44 367789999999998 9999999999995 5778999999999999999743
No 78
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=1.2e-32 Score=278.99 Aligned_cols=281 Identities=18% Similarity=0.268 Sum_probs=201.2
Q ss_pred CCcEEEECCChHHHHHHHHHHH-C------CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQ-L------GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS 115 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~-~------g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~ 115 (507)
.+||+||||||||++||..|++ . |++|+|||+.+.+||.| ..++.|.+....
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~-~~gv~p~~~~~~-------------------- 61 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV-RSGVAPDHPKIK-------------------- 61 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH-HHTSCTTCTGGG--------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc-ccccCCCCCCHH--------------------
Confidence 4799999999999999999999 7 99999999988888876 345555321110
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCC-CC--CCC
Q 010573 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD-VK--SLP 192 (507)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~--~~p 192 (507)
.+...+..++++.+++++.+.. ++. .|.+.++ .+.||+||+|||+. |. .+|
T Consensus 62 ------------------~~~~~~~~~~~~~~v~~~~~v~--v~~---~v~~~~~---~~~~d~lViAtG~~~~~~~~ip 115 (456)
T 1lqt_A 62 ------------------SISKQFEKTAEDPRFRFFGNVV--VGE---HVQPGEL---SERYDAVIYAVGAQSDRMLNIP 115 (456)
T ss_dssp ------------------GGHHHHHHHHTSTTEEEEESCC--BTT---TBCHHHH---HHHSSEEEECCCCCEECCCCCT
T ss_pred ------------------HHHHHHHHHHhcCCCEEEeeEE--ECC---EEEECCC---eEeCCEEEEeeCCCCCCCCCCC
Confidence 0112233456667888876622 221 1333333 47899999999997 43 456
Q ss_pred CCccCCceEecchhhc-----------ccc-CCCCeEEEEcCcHHHHHHHHHHHhc--------------------C-Ce
Q 010573 193 GITIDEKRIVSSTGAL-----------ALN-EVPKKLVVIGAGYIGLEMGSVWARL--------------------G-SE 239 (507)
Q Consensus 193 g~~~~~~~~~~~~~~~-----------~~~-~~~~~vvVvG~G~~g~e~A~~l~~~--------------------g-~~ 239 (507)
|.. ...+++..++. .+. ..+++++|||+|++|+|+|..|.+. | .+
T Consensus 116 G~~--~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~ 193 (456)
T 1lqt_A 116 GED--LPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQE 193 (456)
T ss_dssp TTT--STTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCE
T ss_pred CCC--CCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcE
Confidence 654 33466655542 122 2479999999999999999999874 5 48
Q ss_pred eEEEcccCccCCCCCH-------------------HH------------------HHHHHHHHHh------cCcEEEcCc
Q 010573 240 VTVVEFAADIVPSMDG-------------------EI------------------RKQFQRSLEK------QKMKFMLKT 276 (507)
Q Consensus 240 Vtlv~~~~~~~~~~d~-------------------~~------------------~~~~~~~l~~------~Gv~i~~~~ 276 (507)
|+++.|++.+...+++ ++ .+.+.+.+++ +||++++++
T Consensus 194 V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~ 273 (456)
T 1lqt_A 194 VVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLT 273 (456)
T ss_dssp EEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSE
T ss_pred EEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCC
Confidence 9999998876543321 11 2344455555 799999999
Q ss_pred eEEEEEEcCCeEEEEEeec-------------CCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCC
Q 010573 277 KVVGVDLSGDGVKLTLEPA-------------AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFA 343 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~-------------~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~ 343 (507)
.+.++..++....+++... .+|+.+++++|.|++|+|++|+. . .+++++++|+|.+|+++|
T Consensus 274 ~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-----~gl~~d~~g~i~vn~~~r 347 (456)
T 1lqt_A 274 SPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-----PGLPFDDQSGTIPNVGGR 347 (456)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-----TTSCCBTTTTBCCEETTE
T ss_pred CCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-----CCCcccCCCCeeECCCCc
Confidence 9999976532112333210 11233579999999999999987 2 357778889999999999
Q ss_pred -CCCCCeEEecCCCCCCC-cHhHHHHHHHHHHHHHcC
Q 010573 344 -TNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 344 -t~~~~IyA~GD~a~~~~-~~~~A~~~g~~aa~~i~~ 378 (507)
|+.|+|||+|||+.+|. ....|+.+|..+|.+|++
T Consensus 348 vt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 348 INGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp ETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 89999999999997665 566899999999999974
No 79
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=4.2e-33 Score=298.33 Aligned_cols=312 Identities=17% Similarity=0.242 Sum_probs=215.2
Q ss_pred ccccccccccceeeeeeccccccCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhh
Q 010573 15 SRNLSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALL 94 (507)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~ 94 (507)
..|..||..+++....+.++ ...+....+||+||||||||++||..|++.|++|+|||+++.+||+|....++|....
T Consensus 362 ~~C~~n~~~g~e~~~~~~~~-~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~- 439 (729)
T 1o94_A 362 MICTQNATAGEEYRRGWHPE-KFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGE- 439 (729)
T ss_dssp CCCSSCTTTTTHHHHCCCTT-CCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGG-
T ss_pred eeeccCcccccccccccccc-ccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHH-
Confidence 35888998888754333222 1334456789999999999999999999999999999999999998877666554311
Q ss_pred hhhHHHHHHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHH--HhCCcEEEEeEEEEecCCEEEEEccCCce
Q 010573 95 HSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLF--KKNKVTYVKGYGKFISPSEVSVDTIEGGN 172 (507)
Q Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~d~~~~~v~~~~g~~ 172 (507)
+..+..+.... ++... ...++++..+ ..+.++++
T Consensus 440 --------------------------~~~~~~~~~~~-------i~~~~~~~~~~v~i~~~---------~~v~~~~~-- 475 (729)
T 1o94_A 440 --------------------------WSYHRDYRETQ-------ITKLLKKNKESQLALGQ---------KPMTADDV-- 475 (729)
T ss_dssp --------------------------GHHHHHHHHHH-------HHHHHHHSTTCEEECSC---------CCCCHHHH--
T ss_pred --------------------------HHHHHHHHHHH-------HHHhhcccCCceEEEeC---------eEEehhhc--
Confidence 11111111111 11111 1124444322 12333333
Q ss_pred EEEEeCeEEEccCCCC----------CCCCCCccCCceEecchhhcccc-CCCCeEEEEc--CcHHHHHHHHHHHhcCCe
Q 010573 173 TVVKGKNIIIATGSDV----------KSLPGITIDEKRIVSSTGALALN-EVPKKLVVIG--AGYIGLEMGSVWARLGSE 239 (507)
Q Consensus 173 ~~~~~d~lvlAtG~~p----------~~~pg~~~~~~~~~~~~~~~~~~-~~~~~vvVvG--~G~~g~e~A~~l~~~g~~ 239 (507)
..+.||+||||||+.| +.+||.......+++..+++... ..+++|+||| +|.+|+|+|..|++.|.+
T Consensus 476 ~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~ 555 (729)
T 1o94_A 476 LQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHE 555 (729)
T ss_dssp HTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCE
T ss_pred cccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCE
Confidence 3578999999999973 23455432134577777765543 3468999999 999999999999999999
Q ss_pred eEEEcccCccCC--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCC----------------CceE
Q 010573 240 VTVVEFAADIVP--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAG----------------GEKT 301 (507)
Q Consensus 240 Vtlv~~~~~~~~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~----------------g~~~ 301 (507)
|+++++.+ +++ .++.. ...+.+.+++.||++++++.+++++. +++.+......+ ++..
T Consensus 556 Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (729)
T 1o94_A 556 VTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHR 631 (729)
T ss_dssp EEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCE
T ss_pred EEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcce
Confidence 99999988 544 12322 45677888999999999999999963 455444311000 1123
Q ss_pred EEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCCC
Q 010573 302 ILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHG 381 (507)
Q Consensus 302 ~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~~ 381 (507)
++++|.||+|+|.+|++.+ ++.++ ..+|++++|++|+|||+|||+. +..+..|+.||+.||.+|.+.
T Consensus 632 ~i~aD~Vv~a~G~~p~~~l--~~~l~--------~~vd~~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA~~i~~~-- 698 (729)
T 1o94_A 632 WIEFDSLVLVTGRHSECTL--WNELK--------ARESEWAENDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEEA-- 698 (729)
T ss_dssp EEECSEEEEESCEEECCHH--HHHHH--------HTGGGTGGGTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTSS--
T ss_pred eeeCCEEEECCCCCCChHH--HHHHh--------hhcccccccCCCCeEEEeCccc-hhhHHHHHHHHHHHHHHhhhh--
Confidence 4999999999999999875 33321 1378899999999999999986 556778999999999999764
Q ss_pred CCCCCCccE
Q 010573 382 HVDYDKVPG 390 (507)
Q Consensus 382 ~~~~~~~p~ 390 (507)
..+..+|+
T Consensus 699 -l~~~~~p~ 706 (729)
T 1o94_A 699 -NPQIAIPY 706 (729)
T ss_dssp -CTTSCCCC
T ss_pred -cccCCCCe
Confidence 34455563
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=1.6e-32 Score=278.34 Aligned_cols=281 Identities=17% Similarity=0.216 Sum_probs=200.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
.+||+||||||||+++|..|++.| ++|+|||+++.+||.+ +.++.|.+....
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~-~~g~~p~~~~~~------------------------- 59 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV-RFGVAPDHPEVK------------------------- 59 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH-HHTSCTTCGGGG-------------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee-ecccCCCCccHH-------------------------
Confidence 579999999999999999999988 9999999988888754 444544321100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCC-C--CCCCCccC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV-K--SLPGITID 197 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p-~--~~pg~~~~ 197 (507)
.+...+..++++.+++++.+... . . .|.+.+ ..+.||+||||||+.| . .+||..
T Consensus 60 -------------~~~~~~~~~~~~~gv~~~~~~~v--~-~--~V~~~~---~~~~~d~lVlAtGs~~~~~~~ipG~~-- 116 (460)
T 1cjc_A 60 -------------NVINTFTQTARSDRCAFYGNVEV--G-R--DVTVQE---LQDAYHAVVLSYGAEDHQALDIPGEE-- 116 (460)
T ss_dssp -------------GHHHHHHHHHTSTTEEEEBSCCB--T-T--TBCHHH---HHHHSSEEEECCCCCEECCCCCTTTT--
T ss_pred -------------HHHHHHHHHHHhCCcEEEeeeEE--e-e--EEEecc---ceEEcCEEEEecCcCCCCCCCCCCCC--
Confidence 01122345566778888766322 1 1 122222 2368999999999985 3 455543
Q ss_pred CceEecchhhcc----------cc-C-CCCeEEEEcCcHHHHHHHHHHH--------------------hcCC-eeEEEc
Q 010573 198 EKRIVSSTGALA----------LN-E-VPKKLVVIGAGYIGLEMGSVWA--------------------RLGS-EVTVVE 244 (507)
Q Consensus 198 ~~~~~~~~~~~~----------~~-~-~~~~vvVvG~G~~g~e~A~~l~--------------------~~g~-~Vtlv~ 244 (507)
...+++..++.. +. . .+++++|||+|++|+|+|..|. +.|. +|+++.
T Consensus 117 ~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~ 196 (460)
T 1cjc_A 117 LPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVG 196 (460)
T ss_dssp STTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEEC
T ss_pred CCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEE
Confidence 345666655521 11 1 4799999999999999999998 5677 799999
Q ss_pred ccCcc--------------CCCC-------------------CHH---HHHHHHHHHHh--------------cCcEEEc
Q 010573 245 FAADI--------------VPSM-------------------DGE---IRKQFQRSLEK--------------QKMKFML 274 (507)
Q Consensus 245 ~~~~~--------------~~~~-------------------d~~---~~~~~~~~l~~--------------~Gv~i~~ 274 (507)
|++.+ ++.. ++. +.+.+.+.+++ .||++++
T Consensus 197 r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~ 276 (460)
T 1cjc_A 197 RRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRF 276 (460)
T ss_dssp SSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEEC
T ss_pred cCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEEC
Confidence 98765 2210 110 23344445555 8999999
Q ss_pred CceEEEEEEcC-C-eE-EEEEeec------------CCCceEEEEcCEEEEeecCCCCCCCCCCcccCc-eecCCCCeec
Q 010573 275 KTKVVGVDLSG-D-GV-KLTLEPA------------AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGV-ETDKMGRIPV 338 (507)
Q Consensus 275 ~~~v~~i~~~~-~-~v-~v~~~~~------------~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl-~~~~~G~i~V 338 (507)
++.++++..++ + .+ .+++... .+|+.+++++|.||+++|++|+. . .|+ +++++|+|.|
T Consensus 277 ~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d~~g~i~v 350 (460)
T 1cjc_A 277 FRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I-----DPSVPFDPKLGVVP 350 (460)
T ss_dssp SEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C-----CTTSCCBTTTTBCC
T ss_pred CCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C-----CCCcccccCCCeeE
Confidence 99999998763 3 23 2443311 02334689999999999999987 2 367 7888899999
Q ss_pred CCCCCCC-CCCeEEecCCCCCCC-cHhHHHHHHHHHHHHHcC
Q 010573 339 NERFATN-IPGVYAIGDVIPGPM-LAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 339 d~~~~t~-~~~IyA~GD~a~~~~-~~~~A~~~g~~aa~~i~~ 378 (507)
|+++||+ +|+|||+|||+.+|. ....|+.+|+.+|.+|++
T Consensus 351 n~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 351 NMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp EETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHH
Confidence 9999998 799999999997665 467899999999999974
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=3.5e-31 Score=269.57 Aligned_cols=308 Identities=15% Similarity=0.171 Sum_probs=200.5
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCc---EEEEecCCCCCceeccc---cccchhhhhhhhHHHHHHHhhhhhCCccc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQ---LGLK---TTCIEKRGALGGTCLNV---GCIPSKALLHSSHMYHEAMHSFASHGVKF 114 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~---~g~~---V~lie~~~~~GG~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~g~~~ 114 (507)
+||+|||||+||++||..|++ .|++ |+|||+++.+||.|.+. +|.|...... ...|..+........+.+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~-~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVH-SSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCC-CCCCTTCBCSSCGGGTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCc-CccccchhhcCChhhccc
Confidence 699999999999999999999 9999 99999999999999763 3332110000 000000000000000000
Q ss_pred CccccChHHHHH---HHHHHHHHHHHHHHHHHHhCCcE--EEEe-EEEEec--CC--EEEEEccC---CceEEEEeCeEE
Q 010573 115 SSVEVDLPAMMA---QKDKAVSNLTRGIEGLFKKNKVT--YVKG-YGKFIS--PS--EVSVDTIE---GGNTVVKGKNII 181 (507)
Q Consensus 115 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~~~~~d--~~--~~~v~~~~---g~~~~~~~d~lv 181 (507)
. .+.+..-.. ........+..++....++.+++ +..+ .+..++ .+ .+.|.+.+ |+..++.||+||
T Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VV 159 (464)
T 2xve_A 82 A--DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVV 159 (464)
T ss_dssp T--TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred C--CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEE
Confidence 0 011110000 00000122333344455555665 5444 444442 22 45565543 434678999999
Q ss_pred EccC--CCCC--CCCCCccCCceEecchhhcccc-CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHH
Q 010573 182 IATG--SDVK--SLPGITIDEKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE 256 (507)
Q Consensus 182 lAtG--~~p~--~~pg~~~~~~~~~~~~~~~~~~-~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~ 256 (507)
+||| +.|. .+||.......++++.++.... ..+++|+|||+|.+|+|+|..|++.|.+|+++++++.+++..-
T Consensus 160 vAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~~-- 237 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYKW-- 237 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCCC--
T ss_pred ECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCCC--
Confidence 9999 7774 3556543223345555544332 3589999999999999999999999999999999887765321
Q ss_pred HHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCe
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRI 336 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i 336 (507)
..||+++ ..|++++ +++ +++. +++++++|.||+|+|++|+++++. +..+++++++|.+
T Consensus 238 ----------~~~V~~~--~~V~~i~--~~~--V~~~-----dG~~i~~D~Vi~atG~~p~~~~l~-~~~gl~~~~~~~v 295 (464)
T 2xve_A 238 ----------PENWDER--PNLVRVD--TEN--AYFA-----DGSSEKVDAIILCTGYIHHFPFLN-DDLRLVTNNRLWP 295 (464)
T ss_dssp ----------CTTEEEC--SCEEEEC--SSE--EEET-----TSCEEECSEEEECCCBCCCCTTBC-TTTCCCCCSSSCC
T ss_pred ----------CCceEEc--CCeEEEe--CCE--EEEC-----CCCEEeCCEEEECCCCCCCCCCcC-cccccccCCCccc
Confidence 2478876 7888884 344 4454 456899999999999999998863 3467887765555
Q ss_pred ecCCC---CCCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCCC
Q 010573 337 PVNER---FATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKH 380 (507)
Q Consensus 337 ~Vd~~---~~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~~ 380 (507)
++.+ ++|+.|+|||+||++.. .....|..||+.+|+++.|..
T Consensus 296 -~~~~~~~~~t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 296 -LNLYKGVVWEDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp -SSEETTTEESSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHHTTSS
T ss_pred -ccccceEecCCCCCEEEEeCcccc-cchHHHHHHHHHHHHHHcCCC
Confidence 4433 56899999999999865 468899999999999999863
No 82
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=2.3e-32 Score=276.51 Aligned_cols=284 Identities=21% Similarity=0.274 Sum_probs=204.8
Q ss_pred CcEEEECCChHHHHHHHHHHH--CCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQ--LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
+||+|||||+||+++|..|++ .|++|+|||+++.+++. |.. .. .........+....
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------~~~--------~~-----~~~g~~~~~~~~~~- 61 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------PAF--------PH-----LAMGWRKFEDISVP- 61 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------GGH--------HH-----HHHTCSCGGGSEEE-
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------CCc--------ch-----hccCccCHHHHHHH-
Confidence 699999999999999999999 78999999997665432 110 00 00001111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCCCCCCCcc--CCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITI--DEK 199 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~pg~~~--~~~ 199 (507)
+...+++.+++++.+.+..++.+...+.+.++ .++.||+||+|||++|.. |+... ...
T Consensus 62 -----------------~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g--~~i~~d~liiAtG~~~~~-pg~~~~g~~~ 121 (430)
T 3h28_A 62 -----------------LAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLVF-GAEGQEENST 121 (430)
T ss_dssp -----------------STTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEEC-CSBTHHHHSC
T ss_pred -----------------HHHHHHhcCCEEEEEEEEEEECCCCEEEECCC--cEEECCEEEEcCCccccc-CCCCCcCCcc
Confidence 12345667999998888888877667777777 679999999999998753 34431 122
Q ss_pred eEecchhhccccC------CCCeEEEEcCcHHH------HHHH----HHHHhcC----CeeEEEcccCccC----CCCCH
Q 010573 200 RIVSSTGALALNE------VPKKLVVIGAGYIG------LEMG----SVWARLG----SEVTVVEFAADIV----PSMDG 255 (507)
Q Consensus 200 ~~~~~~~~~~~~~------~~~~vvVvG~G~~g------~e~A----~~l~~~g----~~Vtlv~~~~~~~----~~~d~ 255 (507)
.+.+.+++..+.. .+++++|||+|..+ +|+| ..+.+.| .+|+++++.+.+. +.+ +
T Consensus 122 ~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~ 200 (430)
T 3h28_A 122 SICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-G 200 (430)
T ss_dssp CCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-T
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-h
Confidence 3455555544322 14557888987643 7777 4555667 4899999888763 222 3
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcc--cCceecCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDK--IGVETDKM 333 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~--~gl~~~~~ 333 (507)
+..+.+.+.+++.||++++++.|++++ ++++.+ ++. .++++++++|.+++++|++|+.. +.. .++ .+++
T Consensus 201 ~~~~~l~~~l~~~GV~i~~~~~v~~v~--~~~v~~--~~~-~~~g~~i~~D~vv~a~G~~~~~~---l~~~~~gl-~~~~ 271 (430)
T 3h28_A 201 ASKRLVEDLFAERNIDWIANVAVKAIE--PDKVIY--EDL-NGNTHEVPAKFTMFMPSFQGPEV---VASAGDKV-ANPA 271 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEE--ECT-TSCEEEEECSEEEEECEEECCHH---HHTTCTTT-BCTT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEe--CCeEEE--Eec-CCCceEEeeeEEEECCCCccchh---HhhccccC-cCCC
Confidence 578888999999999999999999995 344443 321 23478999999999999998754 233 466 5778
Q ss_pred C-CeecCCCCCC-CCCCeEEecCCCCC------------CCcHhHHHHHHHHHHHHHcC
Q 010573 334 G-RIPVNERFAT-NIPGVYAIGDVIPG------------PMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 334 G-~i~Vd~~~~t-~~~~IyA~GD~a~~------------~~~~~~A~~~g~~aa~~i~~ 378 (507)
| +|.||+++|| ++|||||+|||+.. |..++.|..||+.||+||..
T Consensus 272 G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 272 NKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 9 9999999998 99999999999963 56899999999999999974
No 83
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=1.6e-30 Score=266.01 Aligned_cols=316 Identities=15% Similarity=0.181 Sum_probs=204.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-----CcEEEEecCCCCCceecccccc-chhhhh-----------hhhHHHHHHH
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLG-----LKTTCIEKRGALGGTCLNVGCI-PSKALL-----------HSSHMYHEAM 104 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g-----~~V~lie~~~~~GG~~~~~~~~-p~~~~~-----------~~~~~~~~~~ 104 (507)
..|||+|||||+||+++|..|++.| .+|+|||+++.+|... +.+ |...+. .+... ..+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~---~~~~~~~~~~~~~~~~l~~~~~p~~~-~~~~ 104 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG---NTLVSQSELQISFLKDLVSLRNPTSP-YSFV 104 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG---GGCCSSCBCSSCTTSSSSTTTCTTCT-TSHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC---CCCCCCCcCCcchhhccccccCCCCC-CChh
Confidence 4579999999999999999999999 9999999988777221 111 110000 00000 0000
Q ss_pred hhhhhCCc-----ccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecC----CE---EEEEccCC-
Q 010573 105 HSFASHGV-----KFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP----SE---VSVDTIEG- 170 (507)
Q Consensus 105 ~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~----~~---~~v~~~~g- 170 (507)
.++...+. ........ ...+..++....++.++++..+. +..++. .. +.|.+.++
T Consensus 105 ~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~ 173 (463)
T 3s5w_A 105 NYLHKHDRLVDFINLGTFYPC-----------RMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNAD 173 (463)
T ss_dssp HHHHHTTCHHHHHHHCCSCCB-----------HHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETT
T ss_pred HhhhhcCceeecccccCCCCC-----------HHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCC
Confidence 00000000 00000000 12233334455556677777764 555443 22 35655544
Q ss_pred -ceEEEEeCeEEEccCCCCCCCCCCc-cCCc-eEecchhh-ccccC------CCCeEEEEcCcHHHHHHHHHHHhc--CC
Q 010573 171 -GNTVVKGKNIIIATGSDVKSLPGIT-IDEK-RIVSSTGA-LALNE------VPKKLVVIGAGYIGLEMGSVWARL--GS 238 (507)
Q Consensus 171 -~~~~~~~d~lvlAtG~~p~~~pg~~-~~~~-~~~~~~~~-~~~~~------~~~~vvVvG~G~~g~e~A~~l~~~--g~ 238 (507)
+..++.||+||+|||+.|..+++.. ..+. .+++..+. ..... .+++|+|||+|.+|+|+|..|.+. +.
T Consensus 174 g~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~ 253 (463)
T 3s5w_A 174 GEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSV 253 (463)
T ss_dssp SCEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTE
T ss_pred CceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCC
Confidence 2348999999999999876444332 2232 34433332 22222 489999999999999999999999 89
Q ss_pred eeEEEcccCccCCCC--------------------CHHHHHHHHHHHHh--------------------------cCcEE
Q 010573 239 EVTVVEFAADIVPSM--------------------DGEIRKQFQRSLEK--------------------------QKMKF 272 (507)
Q Consensus 239 ~Vtlv~~~~~~~~~~--------------------d~~~~~~~~~~l~~--------------------------~Gv~i 272 (507)
+|++++|.+.+++.. +++....+.+.+.. .||++
T Consensus 254 ~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 333 (463)
T 3s5w_A 254 QADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAF 333 (463)
T ss_dssp EEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEE
T ss_pred eEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 999999998775522 22222333333222 59999
Q ss_pred EcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC--CCCCCCcccCceecCCCCeecCCCCCCC-----
Q 010573 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF--TAGLGLDKIGVETDKMGRIPVNERFATN----- 345 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~--~~~l~~~~~gl~~~~~G~i~Vd~~~~t~----- 345 (507)
++++.|++++.+++++.+++.+..+|+..++++|.||+|+|++|+ ..+ ++.....+ |++.||+++++.
T Consensus 334 ~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~--l~~l~~~~---g~i~v~~~~~~~~~~~~ 408 (463)
T 3s5w_A 334 RCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQL--LEPLAEYL---GDHEIGRDYRLQTDERC 408 (463)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTT--TGGGGGGB---C--CCCTTSBCCBCTTB
T ss_pred EeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccch--hHHHHHHh---CCcccCcccccccCCCC
Confidence 999999999988888888887655666677999999999999999 444 34433332 789999999864
Q ss_pred CCCeEEecCCC-----CCCCcHhHHHHHHHHHHHHHc
Q 010573 346 IPGVYAIGDVI-----PGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 346 ~~~IyA~GD~a-----~~~~~~~~A~~~g~~aa~~i~ 377 (507)
.|+|||+|||. ..+.+...|.+++.+++..+-
T Consensus 409 ~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 409 KVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp CSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 46799999998 346688899999998877664
No 84
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.98 E-value=6.3e-33 Score=278.39 Aligned_cols=284 Identities=17% Similarity=0.207 Sum_probs=202.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
++|||||||+||++||.+|++.+ .+|+|||+++.....+. ... +............+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~------~~~--------------v~~g~~~~~~~~~~~ 62 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYM------SNE--------------VIGGDRELASLRVGY 62 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTT------HHH--------------HHHTSSCGGGGEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccC------HHH--------------HhcCCCCHHHHhhCH
Confidence 57999999999999999999875 68999999654321110 000 000111111122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCccCC-
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDE- 198 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~~~~- 198 (507)
+.+...+++++.+++..+|++...+.+.+| .++.||+||+|||+++. .+||.....
T Consensus 63 -------------------~~~~~~gv~~i~~~v~~id~~~~~v~~~~g--~~i~yd~LviAtG~~~~~~~i~G~~e~~~ 121 (401)
T 3vrd_B 63 -------------------DGLRAHGIQVVHDSALGIDPDKKLVKTAGG--AEFAYDRCVVAPGIDLLYDKIEGYSEALA 121 (401)
T ss_dssp -------------------HHHHHTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECGGGSBTCCSGGG
T ss_pred -------------------HHHHHCCCEEEEeEEEEEEccCcEEEeccc--ceeecceeeeccCCccccCCccCchhhcc
Confidence 223456899999999999998888888888 78999999999999874 566654211
Q ss_pred -ce---Eecchhhcccc------CCCCeEEEEcCc----------HHHHHHHHHHHhcC--CeeEEEcccCccC--CCCC
Q 010573 199 -KR---IVSSTGALALN------EVPKKLVVIGAG----------YIGLEMGSVWARLG--SEVTVVEFAADIV--PSMD 254 (507)
Q Consensus 199 -~~---~~~~~~~~~~~------~~~~~vvVvG~G----------~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--~~~d 254 (507)
.. ..+.++...+. ..+..+++.+++ ..+++++..+.+.+ .+|++++..+.+. +.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 201 (401)
T 3vrd_B 122 AKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFT 201 (401)
T ss_dssp GTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHH
T ss_pred cCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccccccccccc
Confidence 11 12223332221 123344443221 14556677776665 6899999887763 3566
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMG 334 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G 334 (507)
+.+.+.+.+.+++.||++++++.+..++.+.+...+++. +++++++|.+++++|.+|+.. ++..++ .+++|
T Consensus 202 ~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~-----~g~~i~~D~vi~~~g~~~~~~---~~~~gl-~~~~G 272 (401)
T 3vrd_B 202 KGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETS-----FGETFKAAVINLIPPQRAGKI---AQSASL-TNDSG 272 (401)
T ss_dssp HHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEET-----TSCEEECSEEEECCCEEECHH---HHHTTC-CCTTS
T ss_pred HHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcC-----CCcEEEeeEEEEecCcCCchh---Hhhccc-cccCC
Confidence 777777778888999999999999999887777677664 567899999999999999743 567777 46789
Q ss_pred CeecCCC-CC-CCCCCeEEecCCCCC---CCcHhHHHHHHHHHHHHHc
Q 010573 335 RIPVNER-FA-TNIPGVYAIGDVIPG---PMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 335 ~i~Vd~~-~~-t~~~~IyA~GD~a~~---~~~~~~A~~~g~~aa~~i~ 377 (507)
+|.||++ +| |++|||||+|||+.. |++++.|.+||+++|+||+
T Consensus 273 ~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 273 WCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp SBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred CEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 9999987 66 899999999999853 5689999999999999997
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=2.3e-31 Score=292.24 Aligned_cols=281 Identities=17% Similarity=0.211 Sum_probs=199.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..+||+||||||||++||.+|++.|++|+|||+++.+||+|.+ | |...+ ... ..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~--~-~k~~i-~~~----------------------~~ 180 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD--T-AGEQI-DGM----------------------DS 180 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG--S-SCCEE-TTE----------------------EH
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc--C-Ccccc-CCC----------------------CH
Confidence 4589999999999999999999999999999999899999873 2 21000 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeE-EEEecCCEEE--EE---------cc----CCceEEEEeCeEEEcc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGY-GKFISPSEVS--VD---------TI----EGGNTVVKGKNIIIAT 184 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~~d~~~~~--v~---------~~----~g~~~~~~~d~lvlAt 184 (507)
. .+.....+.+.+ .+++++.+. +..++.+... +. .. ++....+.||+|||||
T Consensus 181 ---~--------~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlAT 249 (965)
T 2gag_A 181 ---S--------AWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLAT 249 (965)
T ss_dssp ---H--------HHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECC
T ss_pred ---H--------HHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECC
Confidence 0 001111222333 488888763 4444433211 11 00 1222579999999999
Q ss_pred CCCCC--CCCCCccCCceEecchhhcc----ccC-CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHH
Q 010573 185 GSDVK--SLPGITIDEKRIVSSTGALA----LNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 257 (507)
Q Consensus 185 G~~p~--~~pg~~~~~~~~~~~~~~~~----~~~-~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~ 257 (507)
|+.|. .+||.+ ...+++..++.. ... .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ .
T Consensus 250 Gs~p~~~~ipG~~--~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~----~- 322 (965)
T 2gag_A 250 GAHERPIVFENND--RPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA----A- 322 (965)
T ss_dssp CEEECCCCCBTCC--STTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH----H-
T ss_pred CCccCCCCCCCCC--CCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch----h-
Confidence 99774 345544 344666543322 112 258999999999999999999999999999999887642 2
Q ss_pred HHHHHHHHHhcCcEEEcCceEEEEEEc-CCeE-EEEEee--cC--CCceEEEEcCEEEEeecCCCCCCCCCCcccCceec
Q 010573 258 RKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGV-KLTLEP--AA--GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETD 331 (507)
Q Consensus 258 ~~~~~~~l~~~Gv~i~~~~~v~~i~~~-~~~v-~v~~~~--~~--~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~ 331 (507)
.+.+++.||++++++.+++++.+ ++++ .+++.+ .. +|+.+++++|.|++++|++|+++++ +.
T Consensus 323 ----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~--~~------ 390 (965)
T 2gag_A 323 ----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLH--SQ------ 390 (965)
T ss_dssp ----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHH--HH------
T ss_pred ----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHH--Hh------
Confidence 56678899999999999999873 3333 455543 10 1233789999999999999998752 22
Q ss_pred CCCCeecCCCCC-----CCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCC
Q 010573 332 KMGRIPVNERFA-----TNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 332 ~~G~i~Vd~~~~-----t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
..|.|.+|++++ |++|+|||+|||++.+.+. .|..||+.||.+|++.
T Consensus 391 ~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~-~A~~~G~~aA~~i~~~ 442 (965)
T 2gag_A 391 RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTA-SALSTGAATGAAAATA 442 (965)
T ss_dssp TTCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHH-HHHHHHHHHHHHHHHH
T ss_pred CCCcEEEcCcccccccCCCCCCEEEEEecCCchhHH-HHHHHHHHHHHHHHHH
Confidence 246799999887 8999999999999887765 8999999999999743
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=9.5e-31 Score=265.96 Aligned_cols=301 Identities=13% Similarity=0.092 Sum_probs=195.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC--cEEEEecCCCCCceecccccc------chhhh-------hh-------hhH
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKRGALGGTCLNVGCI------PSKAL-------LH-------SSH 98 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~~~~------p~~~~-------~~-------~~~ 98 (507)
...+||+|||||++|+++|..|++.|. +|+|||+++.+||.|.+.++. |.... .. ...
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 346899999999999999999999999 999999988999999877652 21100 00 000
Q ss_pred HHHHHH----hhhhhC-CcccCc--cc-cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEe--cCCEEEEEc
Q 010573 99 MYHEAM----HSFASH-GVKFSS--VE-VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVSVDT 167 (507)
Q Consensus 99 ~~~~~~----~~~~~~-g~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--d~~~~~v~~ 167 (507)
.+..+. ..+..+ +..+.. .. .... .+..++....++.+..+..+ .+..+ +.+.+.|.+
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~ 152 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRH-----------TIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTY 152 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHH-----------HHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHH-----------HHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEE
Confidence 000000 000000 111100 00 1111 12222333333334444443 34433 344556665
Q ss_pred cC---Cc-eEEEEeCeEEEccCC--CCC--CCCCCccC----CceEecchhhcccc-CCCCeEEEEcCcHHHHHHHHHHH
Q 010573 168 IE---GG-NTVVKGKNIIIATGS--DVK--SLPGITID----EKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWA 234 (507)
Q Consensus 168 ~~---g~-~~~~~~d~lvlAtG~--~p~--~~pg~~~~----~~~~~~~~~~~~~~-~~~~~vvVvG~G~~g~e~A~~l~ 234 (507)
.+ |+ ..++.||+||+|||. .|. .+||.... ...++++.++.... ..+++|+|||+|.+|+|+|..|+
T Consensus 153 ~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~ 232 (447)
T 2gv8_A 153 KGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLT 232 (447)
T ss_dssp EESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHT
T ss_pred eecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHH
Confidence 54 53 347999999999998 553 34554310 11255555544333 25899999999999999999999
Q ss_pred hcCCe-eEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEE-EEcCEEEEee
Q 010573 235 RLGSE-VTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTI-LEADVVLVSA 312 (507)
Q Consensus 235 ~~g~~-Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~-i~~D~vi~a~ 312 (507)
+.+.+ |+++++.+.+ ++..||.+ +..|++++.+++. +++. +++. +++|.||+|+
T Consensus 233 ~~~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~~--v~~~-----dG~~~~~~D~vi~at 288 (447)
T 2gv8_A 233 PVAKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTTRE--IYLK-----GGKVLSNIDRVIYCT 288 (447)
T ss_dssp TTSCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETTTTE--EEET-----TTEEECCCSEEEECC
T ss_pred HHhCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCCCE--EEEC-----CCCEeccCCEEEECC
Confidence 99999 9999998764 34567774 5778888644443 4554 3445 7999999999
Q ss_pred cCCCCCCC-----CCCcccCceecCCCCeecCCCCC---CCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcCC
Q 010573 313 GRTPFTAG-----LGLDKIGVETDKMGRIPVNERFA---TNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 313 G~~p~~~~-----l~~~~~gl~~~~~G~i~Vd~~~~---t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
|++|++++ +.....++.. ++.+.++.+.+ ++.|+||++||+.... .++.|..||+++|.++.|.
T Consensus 289 G~~~~~~~l~~~~l~~~~~~i~~--~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 289 GYLYSVPFPSLAKLKSPETKLID--DGSHVHNVYQHIFYIPDPTLAFVGLALHVV-PFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp CBCCCCCCHHHHSCCSTTTCCCS--SSSSCCSEETTTEETTCTTEEESSCCBSSC-HHHHHHHHHHHHHHHHTTS
T ss_pred CCCcCCCCCcccccccccCceec--CCCcccccccccccCCCCcEEEEecccccc-CchHHHHHHHHHHHHHcCC
Confidence 99999987 5311113333 35666776666 7899999999998764 7889999999999999976
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.97 E-value=2e-30 Score=275.96 Aligned_cols=277 Identities=21% Similarity=0.275 Sum_probs=201.3
Q ss_pred cccccccccceeeeeeccccccCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhh
Q 010573 16 RNLSNSSNGNVFKYSFSLTRGFASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLH 95 (507)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~ 95 (507)
.|..||..+++..+. ..+....+||+|||||+||++||..|++.|++|+|||+++.+||++....++|.+.
T Consensus 352 ~C~~np~~~~e~~~~------~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~--- 422 (671)
T 1ps9_A 352 SCLVNPRACHETKMP------ILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKE--- 422 (671)
T ss_dssp CCSSCTTTTCTTTSC------CCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCT---
T ss_pred EEEeCcccccccccC------CCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHH---
Confidence 478888888775432 23345568999999999999999999999999999999989999876554444321
Q ss_pred hhHHHHHHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEE
Q 010573 96 SSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVV 175 (507)
Q Consensus 96 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~ 175 (507)
++. .+..++...+++.+++++.++.... ..+
T Consensus 423 ------------------------~~~-----------~~~~~~~~~~~~~gv~~~~~~~v~~--------------~~~ 453 (671)
T 1ps9_A 423 ------------------------EFY-----------ETLRYYRRMIEVTGVTLKLNHTVTA--------------DQL 453 (671)
T ss_dssp ------------------------THH-----------HHHHHHHHHHHHHTCEEEESCCCCS--------------SSS
T ss_pred ------------------------HHH-----------HHHHHHHHHHHHcCCEEEeCcEecH--------------HHh
Confidence 010 1111233455667888887653211 113
Q ss_pred -EeCeEEEccCCCCCC--CCCCccCCceEecchhhcccc-CCCCeEEEEcCcHHHHHHHHHHHhcCC-------------
Q 010573 176 -KGKNIIIATGSDVKS--LPGITIDEKRIVSSTGALALN-EVPKKLVVIGAGYIGLEMGSVWARLGS------------- 238 (507)
Q Consensus 176 -~~d~lvlAtG~~p~~--~pg~~~~~~~~~~~~~~~~~~-~~~~~vvVvG~G~~g~e~A~~l~~~g~------------- 238 (507)
.||+||||||++|.. +||.. ...+++..+.+... ..+++|+|||+|.+|+|+|..|++.|.
T Consensus 454 ~~~d~lviAtG~~p~~~~i~G~~--~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~ 531 (671)
T 1ps9_A 454 QAFDETILASGIVPRTPPIDGID--HPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEW 531 (671)
T ss_dssp CCSSEEEECCCEEECCCCCBTTT--STTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHT
T ss_pred hcCCEEEEccCCCcCCCCCCCCC--CCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhh
Confidence 799999999998854 44443 34566666655433 358999999999999999999998874
Q ss_pred ------------------------eeEEEcccCccC-CCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEe
Q 010573 239 ------------------------EVTVVEFAADIV-PSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLE 293 (507)
Q Consensus 239 ------------------------~Vtlv~~~~~~~-~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~ 293 (507)
+|+++++.+..+ ..+++.....+.+.|++.||++++++.+++++ ++++.++ .
T Consensus 532 g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~ 608 (671)
T 1ps9_A 532 GIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-I 608 (671)
T ss_dssp TBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-E
T ss_pred cccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-c
Confidence 455666655443 35677777788899999999999999999996 4455543 2
Q ss_pred ecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCC-CcHhHHHHHHHHH
Q 010573 294 PAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGP-MLAHKAEEDGVAC 372 (507)
Q Consensus 294 ~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~-~~~~~A~~~g~~a 372 (507)
+|+.+++++|.||+|+|++|+++++ +.+ .. ..++||++|||+... ..+..|++||..+
T Consensus 609 ---~G~~~~i~~D~Vi~a~G~~p~~~l~--~~l----~~------------~g~~v~aiGD~~~~~~~~~~~A~~~g~~a 667 (671)
T 1ps9_A 609 ---NGETQVLAVDNVVICAGQEPNRALA--QPL----ID------------SGKTVHLIGGCDVAMELDARRAIAQGTRL 667 (671)
T ss_dssp ---TTEEEEECCSEEEECCCEEECCTTH--HHH----HT------------TTCCEEECGGGTCCSSCCHHHHHHHHHHH
T ss_pred ---CCeEEEEeCCEEEECCCccccHHHH--HHH----Hh------------cCCCEEEECCcCccCchhHHHHHHHHHHH
Confidence 3344689999999999999998752 221 11 237999999998654 3689999999999
Q ss_pred HHHH
Q 010573 373 VEFL 376 (507)
Q Consensus 373 a~~i 376 (507)
|.||
T Consensus 668 A~~i 671 (671)
T 1ps9_A 668 ALEI 671 (671)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9986
No 88
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=1.8e-29 Score=258.99 Aligned_cols=255 Identities=19% Similarity=0.212 Sum_probs=182.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..+||+|||||+||++||.+|++. ++|+|||+++.+||.+...... .+++.. +.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~--------------------~~g~~~-----~~ 160 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK--------------------QEGFNK-----DS 160 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE--------------------ETTTTE-----EH
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc--------------------cCCCCC-----CH
Confidence 357999999999999999999999 9999999998999986542110 011100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEc-cCCceEEEEeCeEEEccCCCCCC--CCCCc
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDT-IEGGNTVVKGKNIIIATGSDVKS--LPGIT 195 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~-~~g~~~~~~~d~lvlAtG~~p~~--~pg~~ 195 (507)
. .+...+.+.+ ..+++++.+. +..++ ...+.+.. .+++...+.||+||||||+.|.. +|+.+
T Consensus 161 ~-----------~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~ 228 (493)
T 1y56_A 161 R-----------KVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENND 228 (493)
T ss_dssp H-----------HHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTT
T ss_pred H-----------HHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCC
Confidence 0 1111122223 5578876653 33333 22333332 34434579999999999998753 45543
Q ss_pred cCCceEecchhhcccc-----CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCc
Q 010573 196 IDEKRIVSSTGALALN-----EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKM 270 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~-----~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv 270 (507)
...+++..++..+. ..+++++|+|+|++|+| +.+++.||
T Consensus 229 --~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle----------------------------------~~l~~~GV 272 (493)
T 1y56_A 229 --MPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI----------------------------------QELERWGI 272 (493)
T ss_dssp --STTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH----------------------------------HHHHHHTC
T ss_pred --CCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH----------------------------------HHHHhCCc
Confidence 33466665554321 23589999999999988 45677899
Q ss_pred EEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCcee--cCCCCee-cCCCCCCCCC
Q 010573 271 KFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVET--DKMGRIP-VNERFATNIP 347 (507)
Q Consensus 271 ~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~--~~~G~i~-Vd~~~~t~~~ 347 (507)
++++++.|++++.+++...+.+. +++++++|.|++|+|++|++++ ++.+|+++ +++|+|. ||++++ +.|
T Consensus 273 ~v~~~~~v~~i~~~~~v~~v~~~-----~g~~i~aD~Vv~a~G~~p~~~l--~~~~g~~~~~~~~g~i~~vd~~~~-s~~ 344 (493)
T 1y56_A 273 DYVHIPNVKRVEGNEKVERVIDM-----NNHEYKVDALIFADGRRPDINP--ITQAGGKLRFRRGYYSPVLDEYHR-IKD 344 (493)
T ss_dssp EEEECSSEEEEECSSSCCEEEET-----TCCEEECSEEEECCCEEECCHH--HHHTTCCEEEETTEEEECCCTTSE-EET
T ss_pred EEEeCCeeEEEecCCceEEEEeC-----CCeEEEeCEEEECCCcCcCchH--HHhcCCCccccCCceeeccccccC-cCC
Confidence 99999999999865543344443 4578999999999999999976 56666554 5678887 899999 999
Q ss_pred CeEEecCCCCCCCcHhHHHHHHHHHHHHHcCC
Q 010573 348 GVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 348 ~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
+|||+|||++.+ ++..|..||+.||.+|.+.
T Consensus 345 ~vya~GD~~~~~-~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 345 GIYVAGSAVSIK-PHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp TEEECSTTTCCC-CHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeccCCcc-CHHHHHHHHHHHHHHHHHH
Confidence 999999999754 6889999999999999864
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=5.5e-28 Score=249.56 Aligned_cols=302 Identities=21% Similarity=0.279 Sum_probs=197.5
Q ss_pred CCcEEEECCChHHHHHHHHHH-HCCCcEEEEecCCCCCceeccc---cc---cchhhhhhhhHHHHHHHhhhhhCCcccC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAA-QLGLKTTCIEKRGALGGTCLNV---GC---IPSKALLHSSHMYHEAMHSFASHGVKFS 115 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~-~~g~~V~lie~~~~~GG~~~~~---~~---~p~~~~~~~~~~~~~~~~~~~~~g~~~~ 115 (507)
.+||+|||||++|+++|..|+ +.|++|+|||+++.+||+|... +| +|+..+..... .... ....+.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~--~~~~---~~~~~~-- 80 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFD--RDLL---QESTWK-- 80 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSC--HHHH---HHCCCS--
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccc--cccc---cCCCCc--
Confidence 479999999999999999999 8899999999999999998643 33 34332221110 0000 111111
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEe--cC--CEEEEEccCCceEEEEeCeEEEccC--C
Q 010573 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKV--TYVKG-YGKFI--SP--SEVSVDTIEGGNTVVKGKNIIIATG--S 186 (507)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~~--d~--~~~~v~~~~g~~~~~~~d~lvlAtG--~ 186 (507)
....+.. .+..++....++.++ ++..+ .+..+ +. ..+.|.+.+| .++.||+||+||| +
T Consensus 81 ~~~~~~~-----------ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 81 TTYITQP-----------EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--EVYRAKYVVNAVGLLS 147 (540)
T ss_dssp BSEEEHH-----------HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--CEEEEEEEEECCCSCC
T ss_pred ccCCCHH-----------HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--CEEEeCEEEECCcccc
Confidence 1111111 223334455556666 55544 33332 22 3678888887 5789999999999 5
Q ss_pred CCC--CCCCCc-cCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCCCH----HHH
Q 010573 187 DVK--SLPGIT-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDG----EIR 258 (507)
Q Consensus 187 ~p~--~~pg~~-~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~d~----~~~ 258 (507)
.|. .+||.+ ..+..+++..........+++|+|||+|.+|+|+|..|++.+.+||+++|.+.+ ++.+++ ...
T Consensus 148 ~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~ 227 (540)
T 3gwf_A 148 AINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQI 227 (540)
T ss_dssp SBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHH
T ss_pred cCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHH
Confidence 663 466765 334456666655556667999999999999999999999999999999999984 444332 222
Q ss_pred HHHHH-------------------------------------------------------------------------H-
Q 010573 259 KQFQR-------------------------------------------------------------------------S- 264 (507)
Q Consensus 259 ~~~~~-------------------------------------------------------------------------~- 264 (507)
+.+++ .
T Consensus 228 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (540)
T 3gwf_A 228 AEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKV 307 (540)
T ss_dssp HHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHH
Confidence 21110 0
Q ss_pred --------------------------------HHhcCcEEEc--CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEE
Q 010573 265 --------------------------------LEKQKMKFML--KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLV 310 (507)
Q Consensus 265 --------------------------------l~~~Gv~i~~--~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~ 310 (507)
+.+.+|+++. ...|+++. ++++. +. +++++++|.||+
T Consensus 308 ~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it--~~gv~--~~-----dG~~~~~DvIV~ 378 (540)
T 3gwf_A 308 AEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVT--AKGVV--TE-----DGVLHELDVLVF 378 (540)
T ss_dssp HHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEEC--SSEEE--ET-----TCCEEECSEEEE
T ss_pred HHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEe--cCeEE--cC-----CCCEEECCEEEE
Confidence 1144788875 67888884 45543 32 678899999999
Q ss_pred eecCCCCCCCCCCcccCceecCCCCeecCC----------CCC-CCCCCeEEe-cCCCCCCCcHhHHHHHHHHHHHHHc
Q 010573 311 SAGRTPFTAGLGLDKIGVETDKMGRIPVNE----------RFA-TNIPGVYAI-GDVIPGPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 311 a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~----------~~~-t~~~~IyA~-GD~a~~~~~~~~A~~~g~~aa~~i~ 377 (507)
|||+++++.++ .. +.+..++++.+++ .+. .+.||+|++ |..+........+..|++.+++.|.
T Consensus 379 ATGf~~~~~~~--~~--~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 379 ATGFDAVDGNY--RR--IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp CCCBSCSSHHH--HT--SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHH
T ss_pred CCccCccccCc--Cc--ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHH
Confidence 99999987431 22 2222222333332 233 478999999 8776544566778888888888774
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.95 E-value=2e-27 Score=245.61 Aligned_cols=308 Identities=19% Similarity=0.209 Sum_probs=195.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccCh
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDL 121 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 121 (507)
..+||+|||||++|+++|.+|++.|++|+|||+++.+||+|. ..++|........+.+......-...+........+.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~-~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY-WNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-cCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 458999999999999999999999999999999999999984 5677755443333333322111000011111111222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEe----cCCEEEEEccCCceEEEEeCeEEEccC--CCC--CC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKNKV--TYVKG-YGKFI----SPSEVSVDTIEGGNTVVKGKNIIIATG--SDV--KS 190 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~~----d~~~~~v~~~~g~~~~~~~d~lvlAtG--~~p--~~ 190 (507)
..+. .++....++.++ .+..+ .+..+ +...+.|.+.+| .++.||+||+||| +.| +.
T Consensus 87 ~ei~-----------~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~lV~AtG~~s~p~~p~ 153 (545)
T 3uox_A 87 PEML-----------RYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--EVVTCRFLISATGPLSASRMPD 153 (545)
T ss_dssp HHHH-----------HHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--EEEEEEEEEECCCSCBC---CC
T ss_pred HHHH-----------HHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--CEEEeCEEEECcCCCCCCcCCC
Confidence 2222 222333344343 33333 23222 234678888888 7899999999999 676 35
Q ss_pred CCCCc-cCCceEecchhhcc-------ccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCCC----HHH
Q 010573 191 LPGIT-IDEKRIVSSTGALA-------LNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMD----GEI 257 (507)
Q Consensus 191 ~pg~~-~~~~~~~~~~~~~~-------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~d----~~~ 257 (507)
+||.+ ..+..+++...... ....+|+|+|||+|.+|+|+|..|++.+.+||+++|.+++ ++..+ +..
T Consensus 154 ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~ 233 (545)
T 3uox_A 154 IKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEK 233 (545)
T ss_dssp CTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHH
T ss_pred CCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHH
Confidence 67765 33445666655544 4556899999999999999999999999999999999974 44332 221
Q ss_pred HHHHH---------------------------------------------------------------------------
Q 010573 258 RKQFQ--------------------------------------------------------------------------- 262 (507)
Q Consensus 258 ~~~~~--------------------------------------------------------------------------- 262 (507)
.+.++
T Consensus 234 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (545)
T 3uox_A 234 MDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKI 313 (545)
T ss_dssp HHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHH
Confidence 11110
Q ss_pred --------------------------------HHHHhcCcEEEc--CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEE
Q 010573 263 --------------------------------RSLEKQKMKFML--KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVV 308 (507)
Q Consensus 263 --------------------------------~~l~~~Gv~i~~--~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~v 308 (507)
+.+.+.+|+++. +..|+++. ++++.. . ++ ++++|.|
T Consensus 314 ~~~v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it--~~gv~~--~-----dG-~~~~D~I 383 (545)
T 3uox_A 314 RQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVT--PEGIKT--A-----DA-AYDLDVI 383 (545)
T ss_dssp HHHCSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEE--TTEEEE--S-----SC-EEECSEE
T ss_pred HHHcCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEc--cCeEEe--C-----CC-eeecCEE
Confidence 111223777775 67888884 445443 2 67 8999999
Q ss_pred EEeecCCCCCCCCCCcccCceecCCCCeecCCC-----------CCCCCCCeEEecCCCC---CCCcHhHHHHHHHHHHH
Q 010573 309 LVSAGRTPFTAGLGLDKIGVETDKMGRIPVNER-----------FATNIPGVYAIGDVIP---GPMLAHKAEEDGVACVE 374 (507)
Q Consensus 309 i~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~-----------~~t~~~~IyA~GD~a~---~~~~~~~A~~~g~~aa~ 374 (507)
|+|||+.+++.++ . ++++..+++..+++. +-.+.||+|.+.--.. .......+..|++.+++
T Consensus 384 V~ATGf~~~~~~~--~--~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~ 459 (545)
T 3uox_A 384 IYATGFDAVTGSL--D--RIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLR 459 (545)
T ss_dssp EECCCCBSSSCSC--T--TSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred EECCccccccccC--C--CceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHH
Confidence 9999999977643 2 233333333444322 1247899999843321 23456677888988888
Q ss_pred HHc
Q 010573 375 FLA 377 (507)
Q Consensus 375 ~i~ 377 (507)
.|.
T Consensus 460 ~i~ 462 (545)
T 3uox_A 460 MIS 462 (545)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=7.4e-26 Score=234.13 Aligned_cols=302 Identities=19% Similarity=0.255 Sum_probs=190.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc---cc---cchhhhhhhhHHHHHHHhhhhhCCcccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV---GC---IPSKALLHSSHMYHEAMHSFASHGVKFS 115 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~---~~---~p~~~~~~~~~~~~~~~~~~~~~g~~~~ 115 (507)
..+||+|||||++|+++|.+|++.|++|+|||+++.+||+|... +| +|+..+...... .. .......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~--~~---~~~~~~~-- 92 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSP--EL---EQEWNWS-- 92 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCH--HH---HHHCCCS--
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccc--cc---ccCCCCc--
Confidence 45899999999999999999999999999999999999998632 33 444332221100 00 0111111
Q ss_pred ccccChHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEe--cC--CEEEEEccCCceEEEEeCeEEEccC--C
Q 010573 116 SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKV--TYVKG-YGKFI--SP--SEVSVDTIEGGNTVVKGKNIIIATG--S 186 (507)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~~~--d~--~~~~v~~~~g~~~~~~~d~lvlAtG--~ 186 (507)
....+.. .+..++....++.++ ++..+ .+..+ +. ..+.|.+.+| .++.||+||+||| +
T Consensus 93 ~~~~~~~-----------ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 93 EKYATQP-----------EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--DEVSARFLVVAAGPLS 159 (549)
T ss_dssp SSSCBHH-----------HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCCSEE
T ss_pred cCCCCHH-----------HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--CEEEeCEEEECcCCCC
Confidence 1111112 223334455556665 45444 33333 22 3678888887 5799999999999 6
Q ss_pred CC--CCCCCCc-cCCceEecchhh-ccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCCCHHHHHHH
Q 010573 187 DV--KSLPGIT-IDEKRIVSSTGA-LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQF 261 (507)
Q Consensus 187 ~p--~~~pg~~-~~~~~~~~~~~~-~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~d~~~~~~~ 261 (507)
.| +.+||.. ..+..+++.... ......+++|+|||+|.+|+|+|..|++.+.+|++++|.+++ +|..++++....
T Consensus 160 ~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~ 239 (549)
T 4ap3_A 160 NANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDAT 239 (549)
T ss_dssp ECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHH
T ss_pred CCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHH
Confidence 66 3567765 334445555433 234456899999999999999999999999999999999875 444332221111
Q ss_pred HHH-----------------------------------------------------------------------------
Q 010573 262 QRS----------------------------------------------------------------------------- 264 (507)
Q Consensus 262 ~~~----------------------------------------------------------------------------- 264 (507)
.+.
T Consensus 240 ~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (549)
T 4ap3_A 240 RAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIR 319 (549)
T ss_dssp HHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHH
Confidence 110
Q ss_pred ---------------------------------HHhcCcEEE--cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEE
Q 010573 265 ---------------------------------LEKQKMKFM--LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVL 309 (507)
Q Consensus 265 ---------------------------------l~~~Gv~i~--~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi 309 (507)
+.+.+|+++ ....|+++. ++++.. . ++ ++++|.||
T Consensus 320 ~~v~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it--~~gv~~--~-----dG-~~~~D~iI 389 (549)
T 4ap3_A 320 AVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMD--ETGIVT--T-----GA-HYDLDMIV 389 (549)
T ss_dssp HHCSCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEE--TTEEEE--S-----SC-EEECSEEE
T ss_pred HHcCCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEe--CCcEEe--C-----CC-ceecCEEE
Confidence 122377776 257788874 445443 2 66 89999999
Q ss_pred EeecCCCCCCCCCCcccCceecCCCCeecCCCC----------C-CCCCCeEEe-cCCCC--CCCcHhHHHHHHHHHHHH
Q 010573 310 VSAGRTPFTAGLGLDKIGVETDKMGRIPVNERF----------A-TNIPGVYAI-GDVIP--GPMLAHKAEEDGVACVEF 375 (507)
Q Consensus 310 ~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~----------~-t~~~~IyA~-GD~a~--~~~~~~~A~~~g~~aa~~ 375 (507)
+|||+++++.++ .. +.+..++++.+++.. . ...||+|.+ |--.. .......+..|++.+++.
T Consensus 390 ~ATGf~~~~~~~--~~--~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~ 465 (549)
T 4ap3_A 390 LATGFDAMTGSL--DK--LEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADA 465 (549)
T ss_dssp ECCCEEESSTTG--GG--SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHH
T ss_pred ECCccccccccc--Cc--eeEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHH
Confidence 999999987542 22 333333345554221 1 468999997 43322 234566777888888876
Q ss_pred Hc
Q 010573 376 LA 377 (507)
Q Consensus 376 i~ 377 (507)
|.
T Consensus 466 i~ 467 (549)
T 4ap3_A 466 IA 467 (549)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=1.4e-25 Score=232.98 Aligned_cols=306 Identities=20% Similarity=0.297 Sum_probs=188.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHH--HhhhhhCCcccCcccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA--MHSFASHGVKFSSVEV 119 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~ 119 (507)
..+||+|||||++|+++|..|++.|++|+|||+++.+||+|. ..|.|...+......+... ......... .....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~-~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~--~~~~~ 91 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY-WNRYPGARCDIESIEYCYSFSEEVLQEWNW--TERYA 91 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCTTCBCSSCTTTSSCCSCHHHHHHCCC--CBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-ccCCCceeecccccccccccChhhhhccCc--ccccC
Confidence 358999999999999999999999999999999999999985 3455543221111110000 000001111 01111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEe-EEEEe---c-CCEEEEEccCCceEEEEeCeEEEccCC--CCC-
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNK--VTYVKG-YGKFI---S-PSEVSVDTIEGGNTVVKGKNIIIATGS--DVK- 189 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-~~~~~---d-~~~~~v~~~~g~~~~~~~d~lvlAtG~--~p~- 189 (507)
+...+ ..++....++.+ .++..+ ++..+ + ...+.|.+.+| .++.+|+||+|||. .|.
T Consensus 92 ~~~~i-----------~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 92 SQPEI-----------LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--DRIRARYLIMASGQLSVPQL 158 (542)
T ss_dssp BHHHH-----------HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCCSCCCCCC
T ss_pred CHHHH-----------HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--CEEEeCEEEECcCCCCCCCC
Confidence 11222 222223333333 334433 23222 2 24677887777 57899999999994 553
Q ss_pred -CCCCCc-cCCceEecchhh-ccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-CCCC----CHHHHHH-
Q 010573 190 -SLPGIT-IDEKRIVSSTGA-LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSM----DGEIRKQ- 260 (507)
Q Consensus 190 -~~pg~~-~~~~~~~~~~~~-~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~----d~~~~~~- 260 (507)
.+||.+ ..+..+++.... ......+|+|+|||+|.+|+|++..+++.+.+|+++.|.+.+ ++.. .++..+.
T Consensus 159 p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~ 238 (542)
T 1w4x_A 159 PNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADL 238 (542)
T ss_dssp CCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHH
T ss_pred CCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHH
Confidence 456654 334445555433 223445899999999999999999999999999999998765 2321 1111100
Q ss_pred ----------------------------------------------------------------------HHHH------
Q 010573 261 ----------------------------------------------------------------------FQRS------ 264 (507)
Q Consensus 261 ----------------------------------------------------------------------~~~~------ 264 (507)
+++.
T Consensus 239 ~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (542)
T 1w4x_A 239 KKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVR 318 (542)
T ss_dssp HTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCS
T ss_pred HhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcC
Confidence 0111
Q ss_pred -----------------------------HHhcCcEEE--cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeec
Q 010573 265 -----------------------------LEKQKMKFM--LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG 313 (507)
Q Consensus 265 -----------------------------l~~~Gv~i~--~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G 313 (507)
+.+.+|+++ .+..|+++. ++++. +. + +++++|.||+|||
T Consensus 319 ~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~--~~gv~--~~-----d-~~~~~D~ii~atG 388 (542)
T 1w4x_A 319 DPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETIT--PRGVR--TS-----E-REYELDSLVLATG 388 (542)
T ss_dssp SHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEEC--SSEEE--ES-----S-CEEECSEEEECCC
T ss_pred CHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEc--CCeEE--eC-----C-eEEecCEEEEcCC
Confidence 111346665 356777773 44543 32 5 7899999999999
Q ss_pred CCCCCCCCCCcccCceecCCCCeecCC--------C--CC-CCCCCeEEe-cCCCC--CCCcHhHHHHHHHHHHHHHc
Q 010573 314 RTPFTAGLGLDKIGVETDKMGRIPVNE--------R--FA-TNIPGVYAI-GDVIP--GPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 314 ~~p~~~~l~~~~~gl~~~~~G~i~Vd~--------~--~~-t~~~~IyA~-GD~a~--~~~~~~~A~~~g~~aa~~i~ 377 (507)
+++++.. +.. +.+..++++.+++ + +. ...||+|++ |+.+. .+.....|..|++.++++|.
T Consensus 389 ~~~~~~~--~~~--~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~ 462 (542)
T 1w4x_A 389 FDALTGA--LFK--IDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIA 462 (542)
T ss_dssp CCCTTHH--HHT--SEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccC--cCc--eeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 9998664 222 3322222344432 2 22 468999998 99863 45566889999999999986
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=2.5e-23 Score=184.19 Aligned_cols=152 Identities=22% Similarity=0.260 Sum_probs=132.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC---------CC-----CHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---------SM-----DGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---------~~-----d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+++|||+|++|+++|..|.+.|.+|+++++.+.+++ .+ ++++.+.+.+.+++.|++++++ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 689999999999999999999999999999876552 23 4788889999999999999999 99999
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCCCCC-
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM- 360 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~~~- 360 (507)
+.+++++.+++. ++ ++++|.||+|+|..|+. ++..|++++ +|.|.||+++||+.|+|||+|||+..+.
T Consensus 82 ~~~~~~~~v~~~-----~g-~i~ad~vI~A~G~~~~~----~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~~~ 150 (180)
T 2ywl_A 82 RDMGGVFEVETE-----EG-VEKAERLLLCTHKDPTL----PSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKVPG 150 (180)
T ss_dssp EECSSSEEEECS-----SC-EEEEEEEEECCTTCCHH----HHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCCSC
T ss_pred EEcCCEEEEEEC-----CC-EEEECEEEECCCCCCCc----cccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcchh
Confidence 887777666653 34 79999999999999853 356678888 7999999999999999999999998876
Q ss_pred cHhHHHHHHHHHHHHHcCC
Q 010573 361 LAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 361 ~~~~A~~~g~~aa~~i~~~ 379 (507)
++..|..||+.||.||.+.
T Consensus 151 ~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 151 HAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhHHHHHHHHHHH
Confidence 8999999999999999753
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.87 E-value=4.7e-20 Score=189.14 Aligned_cols=216 Identities=19% Similarity=0.270 Sum_probs=132.9
Q ss_pred EEEEEcc---CCceEEEEeCeEEEccCCCCCCCCCCccCCceEecchhhcc------ccCCCCeEEEEcCcHHHHHHHHH
Q 010573 162 EVSVDTI---EGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALA------LNEVPKKLVVIGAGYIGLEMGSV 232 (507)
Q Consensus 162 ~~~v~~~---~g~~~~~~~d~lvlAtG~~p~~~pg~~~~~~~~~~~~~~~~------~~~~~~~vvVvG~G~~g~e~A~~ 232 (507)
.+.|.+. .|+..++.++.||+|||..|..++.....+..++++..... -...+|+|+|||+|.+|+|++..
T Consensus 185 ~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~ 264 (501)
T 4b63_A 185 FFTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHD 264 (501)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHH
T ss_pred eEEEEEecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHH
Confidence 3566553 35567899999999999877544334444444444443322 12458999999999999999999
Q ss_pred HHhc--CCeeEEEcccCccCCC---------CCHH-----------HHH--------------------HHHHH-----H
Q 010573 233 WARL--GSEVTVVEFAADIVPS---------MDGE-----------IRK--------------------QFQRS-----L 265 (507)
Q Consensus 233 l~~~--g~~Vtlv~~~~~~~~~---------~d~~-----------~~~--------------------~~~~~-----l 265 (507)
|++. +.+|+++.|++.+.+. ++++ ... .+.+. +
T Consensus 265 L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~ 344 (501)
T 4b63_A 265 LQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRV 344 (501)
T ss_dssp HHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhcc
Confidence 9865 6899999998765431 1111 111 11111 1
Q ss_pred H-----hcCcEEEcCceEEEEEEcC--CeEEEEEee-------cCCCceEEEEcCEEEEeecCCCCCCCCCCcc-cCcee
Q 010573 266 E-----KQKMKFMLKTKVVGVDLSG--DGVKLTLEP-------AAGGEKTILEADVVLVSAGRTPFTAGLGLDK-IGVET 330 (507)
Q Consensus 266 ~-----~~Gv~i~~~~~v~~i~~~~--~~v~v~~~~-------~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~-~gl~~ 330 (507)
. .....+..+..+..++... +.+.+.... ...++++++++|.||+|||++|+.....+.. ..+..
T Consensus 345 ~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~ 424 (501)
T 4b63_A 345 KNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRP 424 (501)
T ss_dssp HCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSS
T ss_pred CCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCc
Confidence 0 0123566666676665432 234443321 1124677899999999999999864210111 23556
Q ss_pred cCCCCeecCCCCC--C------CCCCeEEecCCC-----CCCCcHhHHHHHHHHHHHHHcC
Q 010573 331 DKMGRIPVNERFA--T------NIPGVYAIGDVI-----PGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 331 ~~~G~i~Vd~~~~--t------~~~~IyA~GD~a-----~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+.+|.+.|+..++ + ..++||+.|-+- +.+.+...|.+.|+++ +.|+|
T Consensus 425 d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~-~~l~g 484 (501)
T 4b63_A 425 TGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMV-QSIFG 484 (501)
T ss_dssp TTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHH-HHHHH
T ss_pred CcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHH-HHHhc
Confidence 7778888887765 2 236799999543 3466778898888765 34444
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.83 E-value=1.1e-21 Score=199.58 Aligned_cols=305 Identities=17% Similarity=0.171 Sum_probs=170.4
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee----------ccccccchhhhhhh----------------hH
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC----------LNVGCIPSKALLHS----------------SH 98 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~----------~~~~~~p~~~~~~~----------------~~ 98 (507)
||+|||||+||++||..|++.|.+|+||||. ..+|.. .+.++.|.+.+... ..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999997 555542 22223332211110 00
Q ss_pred HHHHHHhhhhhCCcccCcc-----ccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEE-EEccC
Q 010573 99 MYHEAMHSFASHGVKFSSV-----EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVS-VDTIE 169 (507)
Q Consensus 99 ~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~-v~~~~ 169 (507)
.......++...|+++... ...+.......+.....+...+.+.+++.+++++.+. + .+ +...+. +...+
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETT
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEe
Confidence 0112334455566654320 0000000000000112333444455567799998875 5 44 334331 22222
Q ss_pred CceEEEEeCeEEEccCCCCCCCCCCc----cCCceEecchh----hccccCC--CCeEEEEcCcHHHHHHHHHHHhcCCe
Q 010573 170 GGNTVVKGKNIIIATGSDVKSLPGIT----IDEKRIVSSTG----ALALNEV--PKKLVVIGAGYIGLEMGSVWARLGSE 239 (507)
Q Consensus 170 g~~~~~~~d~lvlAtG~~p~~~pg~~----~~~~~~~~~~~----~~~~~~~--~~~vvVvG~G~~g~e~A~~l~~~g~~ 239 (507)
. ...+.+|.||+|||+.+..++... ..+..+..... ...+... ..+++++|+| +++++..+...|..
T Consensus 159 ~-~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~ 235 (472)
T 2e5v_A 159 R-GLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQ 235 (472)
T ss_dssp T-EEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCE
T ss_pred C-CCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCceE
Confidence 1 134779999999999874332111 01111100000 1111111 1234556766 88888888888987
Q ss_pred eEEEcccCccCCCCCHHH--------HHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEE-cCEEEE
Q 010573 240 VTVVEFAADIVPSMDGEI--------RKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILE-ADVVLV 310 (507)
Q Consensus 240 Vtlv~~~~~~~~~~d~~~--------~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~-~D~vi~ 310 (507)
+ +..+.+++++.++++. ...+.+.+++.|. ++++... + +. + ...++ .+.++.
T Consensus 236 ~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~---~~-----~-------~~~~~~~~~~~~ 296 (472)
T 2e5v_A 236 I-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I---ED-----F-------ERKFPVVAKYLA 296 (472)
T ss_dssp E-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C---TT-----H-------HHHCHHHHHHHH
T ss_pred E-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h---HH-----H-------HHHhHHHHHHHH
Confidence 7 7888888886666543 5566666666553 2221110 0 00 0 01232 366777
Q ss_pred eecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCCC-CC----CcHhHHHHHHHHHHHHH
Q 010573 311 SAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GP----MLAHKAEEDGVACVEFL 376 (507)
Q Consensus 311 a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~-~~----~~~~~A~~~g~~aa~~i 376 (507)
+.|..|+ +.+. ..+......|+|+||+++||++|||||+|||++ +. .++.++..+|.+.+..+
T Consensus 297 ~~G~dp~-~~i~--v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a 364 (472)
T 2e5v_A 297 RHGHNYK-VKIP--IFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINL 364 (472)
T ss_dssp HTTCCTT-SCEE--CEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHG
T ss_pred HhCcCcc-cceE--eehhhceeCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHH
Confidence 8899999 6532 222233346899999999999999999999986 33 46677777755544444
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.75 E-value=2.4e-19 Score=178.51 Aligned_cols=201 Identities=18% Similarity=0.302 Sum_probs=116.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC--------cee--ccccccchhhhhhhhHH---------HHH
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG--------GTC--LNVGCIPSKALLHSSHM---------YHE 102 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G--------G~~--~~~~~~p~~~~~~~~~~---------~~~ 102 (507)
.++||+|||||++|++||..|++.|.+|+|+|+++.+| |.| .+.+|.|.+.+.....+ ...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 35899999999999999999999999999999988774 455 34445443322111111 112
Q ss_pred HHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--c----CCEEEEEccCCceEEE
Q 010573 103 AMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--S----PSEVSVDTIEGGNTVV 175 (507)
Q Consensus 103 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d----~~~~~v~~~~g~~~~~ 175 (507)
..+++...|+.+... ++..+++.. ....+...+.+.+++.+++++.+. +..+ + ...+.|.+.++ ++
T Consensus 83 ~~~~~~~~Gi~~~~~--~~g~~~p~~--~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g---~i 155 (401)
T 2gqf_A 83 FISLVAEQGITYHEK--ELGQLFCDE--GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST---QW 155 (401)
T ss_dssp HHHHHHHTTCCEEEC--STTEEEETT--CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE---EE
T ss_pred HHHHHHhCCCceEEC--cCCEEccCC--CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC---EE
Confidence 334445556543211 000000000 112233344556667799998874 4333 3 34566766543 69
Q ss_pred EeCeEEEccCCCCCCCCCCcc-----------------C-CceE-ecchh-h---ccccCCCCeEEEEc-----------
Q 010573 176 KGKNIIIATGSDVKSLPGITI-----------------D-EKRI-VSSTG-A---LALNEVPKKLVVIG----------- 221 (507)
Q Consensus 176 ~~d~lvlAtG~~p~~~pg~~~-----------------~-~~~~-~~~~~-~---~~~~~~~~~vvVvG----------- 221 (507)
.+|+||+|||+.+.+..+... + ...+ ++..+ + +.....+.++.|+|
T Consensus 156 ~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~~l~t 235 (401)
T 2gqf_A 156 QCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTITALCGKSFYNQLLFT 235 (401)
T ss_dssp EESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEEEEEETTSCEEEEEEEEC
T ss_pred ECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeeeeEEEEcCCceEEeCEEEE
Confidence 999999999988732111000 0 0111 12222 2 22222355666668
Q ss_pred ----CcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCH
Q 010573 222 ----AGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDG 255 (507)
Q Consensus 222 ----~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~ 255 (507)
+|+++++++..+.+ |.++++ .++|.++.
T Consensus 236 ~~g~sG~~~l~~s~~~~~-~~~~~i-----~~~p~~~~ 267 (401)
T 2gqf_A 236 HRGISGPAVLQISNYWQP-TESVEI-----DLLPNHNV 267 (401)
T ss_dssp SSEEESHHHHHHTTTCCT-TCCEEE-----ESCSSSCH
T ss_pred CCCccHHHHHHHHHHHhc-CCEEEE-----ECCCCCCH
Confidence 89999999998876 777775 35666663
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.73 E-value=7e-21 Score=184.98 Aligned_cols=245 Identities=14% Similarity=0.134 Sum_probs=144.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHH--CCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQ--LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..+||+||||||||++||++|++ .|++|+|||+++.+||.|.+.+|++++..+....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~--------------------- 122 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPA--------------------- 122 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTT---------------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHH---------------------
Confidence 46899999999999999999974 5999999999999999999888877654322110
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC--CCCCCc-c
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGIT-I 196 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~--~~pg~~-~ 196 (507)
..++++.++++... + ......+.++++++..+. ..|+.. .
T Consensus 123 --------------------~~~~~e~Gv~~~~~---------------~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (326)
T 3fpz_A 123 --------------------HLFLQELEIPYEDE---------------G--DYVVVKHAALFISTVLSKVLQLPNVKLF 165 (326)
T ss_dssp --------------------HHHHHHTTCCCEEC---------------S--SEEEESCHHHHHHHHHHHHHTSTTEEEE
T ss_pred --------------------HHHHHHcCCEEEEC---------------C--cceecceeEEEEcchhhhccccccceee
Confidence 12233345544321 1 123334445555554442 334432 1
Q ss_pred CCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCc
Q 010573 197 DEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
....+............+++++++|+|.++++.|..+.+.+.++++..+.......... ... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~----------~~~------~~ 229 (326)
T 3fpz_A 166 NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRDL----------SQK------HG 229 (326)
T ss_dssp TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBCT----------TSC------CC
T ss_pred cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccccc----------eee------cc
Confidence 11112221112222345789999999999999999999999999998776543211100 000 00
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCceecCCCCeecCCCCCCCCCCeEEecCCC
Q 010573 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVI 356 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a 356 (507)
.+......+...... .....+.+|.+..+.|.+|.. ....+ +.|.+|+.++|++|||||+||++
T Consensus 230 ~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~---------~~~~e-~~iv~~~~~~t~vpGv~aaGDaa 293 (326)
T 3fpz_A 230 VILSTTGHDGPFGAF------CAKRIVDIDQNQKLGGMKGLD---------MNHAE-HDVVIHSGAYAGVDNMYFAGMEV 293 (326)
T ss_dssp EEEECCCSCSSSCSH------HHHHHHHHCTTCCCCCCCCBC---------HHHHH-HHHHHHCEECTTSBTEEECTHHH
T ss_pred eEEEEecceeeEeec------ceeEEEecCceeeecceeccc---------ccccC-CeEEECCCeEECCCCEEEEchHh
Confidence 111111111000000 011234445555555554422 22222 56888999999999999999997
Q ss_pred C--------CCCcHhHHHHHHHHHHHHHc
Q 010573 357 P--------GPMLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 357 ~--------~~~~~~~A~~~g~~aa~~i~ 377 (507)
+ +| ....++.+|+.||+.|+
T Consensus 294 ~~v~g~~rmGp-~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 294 AELDGLNRMGP-TFGAMALSGVHAAEQIL 321 (326)
T ss_dssp HHHHTCCBCCS-CCHHHHHHHHHHHHHHH
T ss_pred ccccCCCcCch-HHHHHHHHHHHHHHHHH
Confidence 3 23 22346678999999885
No 98
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.63 E-value=1.9e-17 Score=167.33 Aligned_cols=98 Identities=20% Similarity=0.201 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeec--------CCCCCCCCCCcc
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAG--------RTPFTAGLGLDK 325 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G--------~~p~~~~l~~~~ 325 (507)
+..+...+.+.+++.| +++++++|++|+.+++++.+++. +++++.+|.||+|+| +.|+.+....+.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~-----~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~ 276 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVK-----DGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSV 276 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEET-----TSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEEC-----CCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHH
Confidence 4445566666677778 99999999999888888887764 455799999999999 888876432222
Q ss_pred cCceecCCCCeecCCCCCCCCCCeEEecCCCCC
Q 010573 326 IGVETDKMGRIPVNERFATNIPGVYAIGDVIPG 358 (507)
Q Consensus 326 ~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~a~~ 358 (507)
.+.... ...++|+..++|+.+++|+.||+...
T Consensus 277 ~~~~~~-~~~~kv~~~~~~~~~~i~~~~d~~~~ 308 (431)
T 3k7m_X 277 IEEGHG-GQGLKILIHVRGAEAGIECVGDGIFP 308 (431)
T ss_dssp HHHCCC-CCEEEEEEEEESCCTTEEEEBSSSSS
T ss_pred HHhCCC-cceEEEEEEECCCCcCceEcCCCCEE
Confidence 222222 23599999999999999999998643
No 99
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.62 E-value=3.2e-15 Score=154.22 Aligned_cols=167 Identities=19% Similarity=0.294 Sum_probs=100.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC-CCCceeccccccchhhhhhhhHHHHHHHhh-------hhhCCcc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAMHS-------FASHGVK 113 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~g~~ 113 (507)
..|||+|||||+||++||..|++.|.+|+|||++. .+| ..+|.|+.......+....+... ....++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG----~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG----QMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT----CCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc----cccccccccchhhHHHHHHHHHhccHHHHHhhhcccc
Confidence 46999999999999999999999999999999964 344 34566654332222222221110 0001111
Q ss_pred cCcc-------------ccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEe--cCCEE-EEEccCCceEEEE
Q 010573 114 FSSV-------------EVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFI--SPSEV-SVDTIEGGNTVVK 176 (507)
Q Consensus 114 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--d~~~~-~v~~~~g~~~~~~ 176 (507)
+... ..+. ..+...+.+.+++ .+++++.+.+..+ +.+.+ .|.+.+| ..+.
T Consensus 103 f~~l~~~kgpav~~~r~~~Dr-----------~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG--~~I~ 169 (651)
T 3ces_A 103 FRILNASKGPAVRATRAQADR-----------VLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMG--LKFR 169 (651)
T ss_dssp EEEESTTSCGGGCEEEEEECH-----------HHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTS--EEEE
T ss_pred hhhhhcccCcccccchhhCCH-----------HHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCC--CEEE
Confidence 1100 0111 1233444556666 6999987777666 34443 5666777 7899
Q ss_pred eCeEEEccCCCCC--CCCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEc
Q 010573 177 GKNIIIATGSDVK--SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244 (507)
Q Consensus 177 ~d~lvlAtG~~p~--~~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~ 244 (507)
+|.||+|||+.+. .++|... + .+.+ +| |.++++++..|.++|.+|+.+.
T Consensus 170 Ad~VVLATGt~s~~~~i~G~~~-----~----------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 170 AKAVVLTVGTFLDGKIHIGLDN-----Y----------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp EEEEEECCSTTTCCEEECC--------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred CCEEEEcCCCCccCccccCccc-----C----------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 9999999998774 3344321 0 1233 56 7889999999999999998774
No 100
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.58 E-value=5e-15 Score=136.10 Aligned_cols=157 Identities=19% Similarity=0.277 Sum_probs=110.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-----------------CCCC-------CHHHHHHHHHHHHhc-C
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-----------------VPSM-------DGEIRKQFQRSLEKQ-K 269 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-----------------~~~~-------d~~~~~~~~~~l~~~-G 269 (507)
.+|+|||+|+.|+++|..|++.|.+|+++++.... ...+ ...+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 36999999999999999999999999999986211 0001 126667788888886 9
Q ss_pred cEEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCCCCCC-C--------------------CcccC
Q 010573 270 MKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPFTAGL-G--------------------LDKIG 327 (507)
Q Consensus 270 v~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l-~--------------------~~~~g 327 (507)
++++ +++++++..+++.+ .+.+. +++++.+|.||+|+|..++.... + +...+
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~~-----~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g 157 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRTW-----EGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLG 157 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEET-----TSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTT
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEEC-----CCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCC
Confidence 9998 57999998777765 35543 34579999999999995543210 0 11122
Q ss_pred ceecCCC--------C-------eecCC------CC-CCCCCCeEEecCCCCCCCcHhHHHHHHHHHHHHHcC
Q 010573 328 VETDKMG--------R-------IPVNE------RF-ATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG 378 (507)
Q Consensus 328 l~~~~~G--------~-------i~Vd~------~~-~t~~~~IyA~GD~a~~~~~~~~A~~~g~~aa~~i~~ 378 (507)
+++.+.. . ..+.. .+ .|++|||||+|||+ .......|+.||+.+|.+|..
T Consensus 158 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 158 FRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp CCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHh
Confidence 2222110 0 00000 12 27999999999999 766888899999999999964
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.47 E-value=1.4e-13 Score=141.52 Aligned_cols=174 Identities=22% Similarity=0.303 Sum_probs=101.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC-CCCceeccccccchhhhhhhhHHHHHHHh-------hhhhCCcc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAMH-------SFASHGVK 113 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~g~~ 113 (507)
..|||+|||||+||++||..|++.|.+|+|||++. .+|+ .+|.|+............+.. .....++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~----~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~ 101 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ----MSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQ 101 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC----cCccccccccchHHHHHHHHHhhhHHHHHhhhcccc
Confidence 46899999999999999999999999999999964 4553 456664322211122221110 00111111
Q ss_pred cCc------cccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEe--cCCEE-EEEccCCceEEEEeCeEEEc
Q 010573 114 FSS------VEVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFI--SPSEV-SVDTIEGGNTVVKGKNIIIA 183 (507)
Q Consensus 114 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--d~~~~-~v~~~~g~~~~~~~d~lvlA 183 (507)
+.. ........... ...+...+.+.+++ .+++++.+.+..+ +.+.+ .|.+.+| ..+.+|.||+|
T Consensus 102 f~~l~~~kGpav~~~r~~~D----r~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG--~~i~AdaVVLA 175 (637)
T 2zxi_A 102 FKMLNTRKGKAVQSPRAQAD----KKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLG--VEYKTKAVVVT 175 (637)
T ss_dssp EEEESTTSCGGGCEEEEEEC----HHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTS--CEEECSEEEEC
T ss_pred eeecccccCccccchhhhCC----HHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCC--cEEEeCEEEEc
Confidence 110 00000000000 01233444556666 5999987777654 34443 4667777 67999999999
Q ss_pred cCCCCC--CCCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEc
Q 010573 184 TGSDVK--SLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVE 244 (507)
Q Consensus 184 tG~~p~--~~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~ 244 (507)
||+.+. .++|... +. +.+ + |+.++++++..|.++|.+++.+.
T Consensus 176 TG~~s~~~~~~G~~~-----~~----------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 176 TGTFLNGVIYIGDKM-----IP----------GGR---L-GEPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp CTTCBTCEEEETTEE-----EE----------CSB---T-TBCCBCTHHHHHHHTTCCCEEEE
T ss_pred cCCCccCceecccee-----cC----------CCC---C-CchhHHHHHHHHHhcCCceEEec
Confidence 998764 2333220 00 112 2 35678899999999998776553
No 102
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.36 E-value=2.5e-12 Score=132.69 Aligned_cols=39 Identities=26% Similarity=0.448 Sum_probs=33.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCce
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (507)
..+||||||||+||++||+.|++ |.+|+||||....+|.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 35899999999999999999999 9999999998766543
No 103
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.29 E-value=9.1e-12 Score=117.93 Aligned_cols=164 Identities=18% Similarity=0.237 Sum_probs=112.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc-CCeeEEEcccCccCCC--------------------------------------CCH
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADIVPS--------------------------------------MDG 255 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~--------------------------------------~d~ 255 (507)
.+|+|||+|++|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999988754210 123
Q ss_pred HHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeE-EEEEeec---------CCCceEEEEcCEEEEeecCCCCCCCCCCc
Q 010573 256 EIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGV-KLTLEPA---------AGGEKTILEADVVLVSAGRTPFTAGLGLD 324 (507)
Q Consensus 256 ~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 324 (507)
++...+.+.+.+ .|+++++++.|+++..+++.+ .+.+... ..++..++++|.||+|+|..++...+..+
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 445556666655 699999999999998777655 3444310 11234689999999999988875432111
Q ss_pred cc---C--ceecCCCCeecCC-------CCCCCCCCeEEecCCCC--------CCCcHhHHHHHHHHHHHHHcCC
Q 010573 325 KI---G--VETDKMGRIPVNE-------RFATNIPGVYAIGDVIP--------GPMLAHKAEEDGVACVEFLAGK 379 (507)
Q Consensus 325 ~~---g--l~~~~~G~i~Vd~-------~~~t~~~~IyA~GD~a~--------~~~~~~~A~~~g~~aa~~i~~~ 379 (507)
.. + +.+.....+.+|. ..+|+.|++|++||++. +| .+..+..+|+.+|.++...
T Consensus 200 ~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp-~~~~~~~sG~~~a~~i~~~ 273 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGP-TFGAMMISGQKAGQLALKA 273 (284)
T ss_dssp HHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCS-CCHHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcCh-HHHHHHHhHHHHHHHHHHH
Confidence 10 1 1111112243332 34577899999999882 23 3567889999999999743
No 104
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.29 E-value=2.7e-12 Score=134.02 Aligned_cols=36 Identities=36% Similarity=0.478 Sum_probs=33.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGAL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~ 78 (507)
.+||||||||+||++||+.|++.| .+|+||||....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 479999999999999999999999 999999997544
No 105
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.18 E-value=1.7e-10 Score=114.91 Aligned_cols=57 Identities=16% Similarity=0.345 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.++.+.+.+.+++.|++++++++|++++.+++++.+.+. ++ ++.+|.||+|+|..+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~-----~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTS-----AG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEET-----TE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEEC-----Cc-EEEeeEEEECCCCccC
Confidence 456677888888899999999999999888888777753 34 8999999999998863
No 106
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.18 E-value=1.1e-11 Score=128.02 Aligned_cols=172 Identities=19% Similarity=0.235 Sum_probs=101.5
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC-CCCceeccccccchhhhhhhhHHHHHHHh-------hhhhC
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG-ALGGTCLNVGCIPSKALLHSSHMYHEAMH-------SFASH 110 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~-~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~ 110 (507)
.....|||+|||||+||++||..|++.|.+|+|||+.. .+|+ .+|.|+.......+..+.+.. .....
T Consensus 17 ~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~----~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~ 92 (641)
T 3cp8_A 17 RGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR----MSCNPAIGGVAKGQITREIDALGGEMGKAIDAT 92 (641)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHH
T ss_pred cccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC----CccccchhhhhHHHHHHHHHhcccHHHHHHHhc
Confidence 34456999999999999999999999999999999964 4554 345554332222222222111 00111
Q ss_pred CcccCc------c-------ccChHHHHHHHHHHHHHHHHHHHHHHHh-CCcEEEEeEEEEe--cCCEEE-EEccCCceE
Q 010573 111 GVKFSS------V-------EVDLPAMMAQKDKAVSNLTRGIEGLFKK-NKVTYVKGYGKFI--SPSEVS-VDTIEGGNT 173 (507)
Q Consensus 111 g~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--d~~~~~-v~~~~g~~~ 173 (507)
++.+.. . ..+.. .+...+.+.+++ .+++++.+.+..+ +.+.+. |.+.+| .
T Consensus 93 gi~f~~l~~~kgpav~~~r~~~Dr~-----------~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G--~ 159 (641)
T 3cp8_A 93 GIQFRMLNRSKGPAMHSPRAQADKT-----------QYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSG--R 159 (641)
T ss_dssp EEEEEEECSSSCTTTCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--C
T ss_pred CCchhhcccccCccccchhhhcCHH-----------HHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCC--c
Confidence 121110 0 01111 223334455666 4899987776653 455555 777777 6
Q ss_pred EEEeCeEEEccCCCCCCCCCCccCCceEecchhhccccCCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEE
Q 010573 174 VVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 243 (507)
Q Consensus 174 ~~~~d~lvlAtG~~p~~~pg~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv 243 (507)
.+.+|.||+|||+.+....... ..-+. ..++ + |+.++++++..|.+.|.++..+
T Consensus 160 ~i~Ad~VVLATG~~s~~~i~~G---~~~~~----------~g~~--v-G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 160 AIQAKAAILACGTFLNGLIHIG---MDHFP----------GGRS--T-AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp EEEEEEEEECCTTCBTCEEEET---TEEEE----------CSSS--T-TSCCBCSHHHHHHHTTCCEEEE
T ss_pred EEEeCEEEECcCCCCCccceee---eeeec----------cccc--c-CCchhhhhHHHHHhCCceEEee
Confidence 8999999999999865321110 00000 0111 1 3577889999999999988654
No 107
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.16 E-value=1.5e-10 Score=121.54 Aligned_cols=38 Identities=26% Similarity=0.386 Sum_probs=33.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHC------CCcEEEEecCCCCCc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL------GLKTTCIEKRGALGG 80 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG 80 (507)
.+||||||||+||++||+.|++. |.+|+||||....++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s 65 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERS 65 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCC
Confidence 58999999999999999999997 999999999654443
No 108
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.10 E-value=1.3e-09 Score=107.00 Aligned_cols=59 Identities=19% Similarity=0.343 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++++++|++++.++++ +.+.+. +|+..++.+|.||+|+|...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~---~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFG---GAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEEC---TTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEEC---CCceeEEEeCEEEECCCcch
Confidence 467778888899999999999999999887665 666653 23336899999999999764
No 109
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.06 E-value=7e-10 Score=113.67 Aligned_cols=143 Identities=15% Similarity=0.211 Sum_probs=81.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC-------ceeccccccchhh-------------------hh
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG-------GTCLNVGCIPSKA-------------------LL 94 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G-------G~~~~~~~~p~~~-------------------~~ 94 (507)
...+||+|||||++|++||+.|++.|++|+|||+.+.++ +.|....|.|... +.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 345899999999999999999999999999999976542 1111111111000 00
Q ss_pred hhhHHHHHHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCE-EEEEccCC
Q 010573 95 HSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSE-VSVDTIEG 170 (507)
Q Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~-~~v~~~~g 170 (507)
............+..+|............+.. .....+...+.+.+++.+++++.+. +..+ +... ..|.+.+|
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~---~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGT---FKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCH---HHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS
T ss_pred cccccHHHHHHHHHHcCCCceEeecccccccc---chHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC
Confidence 00111122333344455432110000000000 0112334445566667899998874 4443 3333 44777777
Q ss_pred ceEEEEeCeEEEccCCCC
Q 010573 171 GNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 171 ~~~~~~~d~lvlAtG~~p 188 (507)
.++.+|.||+|+|..+
T Consensus 262 --~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 --EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp --CEEECSCEEECCCTTC
T ss_pred --CEEECCEEEECCCCCh
Confidence 6799999999999876
No 110
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.04 E-value=1.1e-09 Score=96.12 Aligned_cols=109 Identities=28% Similarity=0.323 Sum_probs=71.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
+||++|||||++|+.+|..|++.|.+|+|||+.+..-..+...... .+++ . ....
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~---------------------~~~~-~--~~~~- 55 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNY---------------------PGLL-D--EPSG- 55 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCS---------------------TTCT-T--CCCH-
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhcc---------------------CCCc-C--CCCH-
Confidence 3799999999999999999999999999999965221100000000 0000 0 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+++++.+++..+ +.+.+.+.+++| ++.+|.||+|+|..|.
T Consensus 56 ----------~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g---~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 56 ----------EELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG---VEKAERLLLCTHKDPT 111 (180)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC---EEEEEEEEECCTTCCH
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC---EEEECEEEECCCCCCC
Confidence 12334445667778999988754444 334566777665 6899999999999983
No 111
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.04 E-value=7.6e-10 Score=101.33 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=73.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhh-hCCcccCccccCh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFA-SHGVKFSSVEVDL 121 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 121 (507)
.|||+|||||++|+++|..|++.|.+|+|||+.....|.+ |.|........+.... +. ..+ .+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~----~~~~~~~~~~~~~~~~----~~d~~g-------~~- 66 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMP----FLPPKPPFPPGSLLER----AYDPKD-------ER- 66 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC----SSCCCSCCCTTCHHHH----HCCTTC-------CC-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcc----cCccccccchhhHHhh----hccCCC-------CC-
Confidence 5899999999999999999999999999999974333321 2222100001111111 11 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEEeEEEEe--cCCEE-EEEccCCceEEEEeCeEEEccCCCCC
Q 010573 122 PAMMAQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFI--SPSEV-SVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~--d~~~~-~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
...+...+.+.+++. +++++...+..+ +.+.+ .+.+.+| .++.+|.||+|+|....
T Consensus 67 ----------~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g--~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 67 ----------VWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEG--PPARGEKVVLAVGSFLG 126 (232)
T ss_dssp ----------HHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CCEECSEEEECCTTCSS
T ss_pred ----------HHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCC--CEEECCEEEECCCCChh
Confidence 112334455666665 999886665544 33343 4666677 57999999999998653
No 112
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.99 E-value=3.1e-09 Score=100.46 Aligned_cols=132 Identities=22% Similarity=0.266 Sum_probs=78.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcc-c-
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV-E- 118 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~- 118 (507)
.++||+|||||++|+++|..|++. |.+|+|||+.+.+||.+...+++......... ....+...|+.+... .
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~-----~~~~l~~~G~~~~~~~~~ 112 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKP-----AHLFLDEIGVAYDEQDTY 112 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETT-----THHHHHHHTCCCEECSSE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcH-----HHHHHHHcCCCcccCCCE
Confidence 358999999999999999999997 99999999988888765544443322111111 112233334443211 0
Q ss_pred ---cChHHHHHHHHHHHHHHHHHHHHHH-HhCCcEEEEeE-EEEe--cCCEE-EEEcc---------C---CceEEEEeC
Q 010573 119 ---VDLPAMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKGY-GKFI--SPSEV-SVDTI---------E---GGNTVVKGK 178 (507)
Q Consensus 119 ---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~-~~~~--d~~~~-~v~~~---------~---g~~~~~~~d 178 (507)
.+.. .+...+.+.+ +..+++++.+. +..+ +...+ .+.+. + ++...+.+|
T Consensus 113 ~~~~~~~-----------~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad 181 (284)
T 1rp0_A 113 VVVKHAA-----------LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK 181 (284)
T ss_dssp EEESCHH-----------HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE
T ss_pred EEecCHH-----------HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECC
Confidence 0111 1222223333 34699998874 4444 33332 22221 1 234689999
Q ss_pred eEEEccCCCCC
Q 010573 179 NIIIATGSDVK 189 (507)
Q Consensus 179 ~lvlAtG~~p~ 189 (507)
.||+|+|..+.
T Consensus 182 ~VV~AtG~~s~ 192 (284)
T 1rp0_A 182 IVVSSCGHDGP 192 (284)
T ss_dssp EEEECCCSSST
T ss_pred EEEECCCCchH
Confidence 99999998663
No 113
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.98 E-value=1.3e-09 Score=113.75 Aligned_cols=42 Identities=43% Similarity=0.617 Sum_probs=38.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
.+||||||||+||++||+.|++.|++|+||||.+..||....
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~ 167 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKL 167 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhh
Confidence 589999999999999999999999999999998888876443
No 114
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.96 E-value=5.7e-09 Score=103.47 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+...+.+..++.|++++.+++++.+..+++.+...... .+++..++.+|.||.|.|....
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~-~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIR-HNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEE-ETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeec-ccccceEEEEeEEEeCCccccH
Confidence 345566677778899999999999998877776533321 2345567999999999997653
No 115
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.93 E-value=8.3e-09 Score=103.98 Aligned_cols=57 Identities=21% Similarity=0.294 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCc---eEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKT---KVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~---~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|+++++++ +|+++..+++++. |++. +++++.+|.||+|+|...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~-----~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTA-----DGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEET-----TTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEEC-----CCCEEECCEEEECCCCCh
Confidence 4677788888889999999999 9999988777777 7664 456899999999999754
No 116
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.93 E-value=1.3e-08 Score=101.00 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+.+.+.+.+++.|++++.+++|++++.+++.+. +++.+ .+++.++.+|.||.|+|...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEE--CCeEEEEEcCEEEECCCcch
Confidence 4556677777788999999999999988888776 77643 23567899999999999876
No 117
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.92 E-value=1.6e-09 Score=112.66 Aligned_cols=42 Identities=26% Similarity=0.565 Sum_probs=37.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
..+||||||||+||++||+.|++.|.+|+||||.+..||...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~ 161 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSM 161 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCccc
Confidence 458999999999999999999999999999999888876543
No 118
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.92 E-value=1.6e-08 Score=107.67 Aligned_cols=57 Identities=12% Similarity=0.192 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++++++|++++.+++++.+++. ++.++.+|.||+|+|...
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~-----~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFA-----GDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEET-----TSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEEC-----CCCEEECCEEEECCCcch
Confidence 567777888888999999999999999988888776653 345799999999999764
No 119
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.91 E-value=5.7e-09 Score=105.34 Aligned_cols=141 Identities=24% Similarity=0.346 Sum_probs=80.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecccc---c------cchhhhh---hhhH---------HHH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVG---C------IPSKALL---HSSH---------MYH 101 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~---~------~p~~~~~---~~~~---------~~~ 101 (507)
++||+|||||++|+++|+.|++.|.+|+|+|+.+.+|+.....+ | .+...+. .... ...
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 48999999999999999999999999999999887764321111 1 0100000 0000 011
Q ss_pred HHHhhhhhCCcccCccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCE-EEEEccCCceEEEEe
Q 010573 102 EAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSE-VSVDTIEGGNTVVKG 177 (507)
Q Consensus 102 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~-~~v~~~~g~~~~~~~ 177 (507)
....++...|+.+..... ..+++.. .....+...+.+.+++.+++++.+. +..+ +... +.|.+.+| ..+.+
T Consensus 106 ~~~~~~~~~G~~~~~~~~--g~~~p~~-~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G--~~i~A 180 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDH--GRMFPVS-NKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTG--EVLET 180 (447)
T ss_dssp HHHHHHHHTTCCEEECGG--GEEEETT-CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTC--CEEEC
T ss_pred HHHHHHHhcCCceEEeeC--CEEECCC-CCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCC--CEEEC
Confidence 223334444543321000 0000000 0012233444555667899988763 4433 3444 66777777 46999
Q ss_pred CeEEEccCCCC
Q 010573 178 KNIIIATGSDV 188 (507)
Q Consensus 178 d~lvlAtG~~p 188 (507)
|.||+|||..+
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999876
No 120
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.91 E-value=1.8e-08 Score=100.92 Aligned_cols=60 Identities=18% Similarity=0.286 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+.+.+.+.+++.|++++.+++|++++.++++..+.+.. .+|+..++.+|.||.|+|..+
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~-~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIED-INGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEE-TTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEc-CCCCEEEEEcCEEEECCCCch
Confidence 455667777778899999999999998887776666543 233334799999999999876
No 121
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.90 E-value=1.9e-08 Score=103.14 Aligned_cols=58 Identities=14% Similarity=0.248 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+.+.+.+.+++.|++|+++++|++|+.++++++ |++. +++++.+|.||.+++....
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~-----~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLE-----DGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-----TSCEEECSCEEECCC----
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEec-----CCcEEEcCEEEECCCHHHH
Confidence 35677788889999999999999999998888876 6665 6789999999998875543
No 122
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.89 E-value=3.7e-08 Score=97.27 Aligned_cols=56 Identities=16% Similarity=0.221 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++.+++|++++.+++++. +++. ++ ++.+|.||+|+|...
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~-----~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTN-----KG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEET-----TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEEC-----Cc-EEECCEEEECcchhH
Confidence 45667788888899999999999999988777766 6543 34 799999999999764
No 123
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.88 E-value=3.3e-09 Score=108.42 Aligned_cols=125 Identities=21% Similarity=0.219 Sum_probs=76.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcc-----c-
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVK-----F- 114 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~-----~- 114 (507)
...+||+|||||++|+++|..|++.|++|+|||+.+.+|+. ...++.|.. ...+...|+. +
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-~~~~~~~~~------------~~~l~~~g~~~~~~~~~ 156 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-NVLHLWPFT------------IHDLRALGAKKFYGRFC 156 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-CEEECCHHH------------HHHHHTTTHHHHCTTTT
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-CcccCChhH------------HHHHHHcCCcccccccc
Confidence 45689999999999999999999999999999998777643 222222210 0111112210 0
Q ss_pred -Cc-cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC-----CEEEEEc--c-CCceEEEEeCeEEEc
Q 010573 115 -SS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP-----SEVSVDT--I-EGGNTVVKGKNIIIA 183 (507)
Q Consensus 115 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~-----~~~~v~~--~-~g~~~~~~~d~lvlA 183 (507)
.. ..++. ..+...+.+.+++.+++++.+ .+..+.. +.+.+.+ . +|+..++.+|+||+|
T Consensus 157 ~~~~~~~~~-----------~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A 225 (497)
T 2bry_A 157 TGTLDHISI-----------RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISA 225 (497)
T ss_dssp CTTCCEEEH-----------HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEEC
T ss_pred ccccccCCH-----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEEC
Confidence 00 00111 223334455566689999887 4544432 3345554 3 442246899999999
Q ss_pred cCCCCC
Q 010573 184 TGSDVK 189 (507)
Q Consensus 184 tG~~p~ 189 (507)
+|..+.
T Consensus 226 ~G~~S~ 231 (497)
T 2bry_A 226 AGGKFV 231 (497)
T ss_dssp CCTTCC
T ss_pred CCCCcc
Confidence 998764
No 124
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.88 E-value=8.9e-09 Score=107.03 Aligned_cols=137 Identities=20% Similarity=0.262 Sum_probs=77.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccch-hhhhhhhHHHHHHHhh--hhhCCcc---
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPS-KALLHSSHMYHEAMHS--FASHGVK--- 113 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~-~~~~~~~~~~~~~~~~--~~~~g~~--- 113 (507)
++..+||+|||||+||+++|..|++.|++|+|||+.+..+... -.+..|. ...+........+... ....+..
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~-G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV-GESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC-CCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEEC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce-eeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEe
Confidence 3456899999999999999999999999999999975433211 1111221 1111111111111110 0000000
Q ss_pred ----------cCc-----------cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec---CCEEEEEcc
Q 010573 114 ----------FSS-----------VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS---PSEVSVDTI 168 (507)
Q Consensus 114 ----------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d---~~~~~v~~~ 168 (507)
+.. ..++. ..+...+.+..++.|++++.+ .+..+. ...+.|.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r-----------~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~ 167 (591)
T 3i3l_A 99 GQDQAPWTFSFAAPKVAPWVFDHAVQVKR-----------EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVR 167 (591)
T ss_dssp SSSCCCEEEECCCC--CTTCCSCEEECCH-----------HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEE
T ss_pred cCCCccceeecccccccccccCeeEEEcH-----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEe
Confidence 000 01111 123334455566789999877 455443 445666665
Q ss_pred -CCceEEEEeCeEEEccCCCC
Q 010573 169 -EGGNTVVKGKNIIIATGSDV 188 (507)
Q Consensus 169 -~g~~~~~~~d~lvlAtG~~p 188 (507)
+|+..++.+|.||.|+|...
T Consensus 168 ~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 168 RGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp ETTEEEEEEESEEEECCGGGC
T ss_pred cCCceEEEEcCEEEECCCCcc
Confidence 55556899999999999865
No 125
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.88 E-value=6e-08 Score=95.92 Aligned_cols=72 Identities=21% Similarity=0.247 Sum_probs=52.6
Q ss_pred CeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 238 SEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 238 ~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
....++......+. +..+...+.+.+++.|++++.+++|++++.+++++.+++. + .++.+|.||+|+|....
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-----~-g~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETA-----N-GSYTADKLIVSMGAWNS 206 (389)
T ss_dssp TEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEET-----T-EEEEEEEEEECCGGGHH
T ss_pred CceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeC-----C-CEEEeCEEEEecCccHH
Confidence 34455544433221 3567778888899999999999999999887777766542 3 37999999999997643
No 126
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.88 E-value=5.3e-08 Score=103.69 Aligned_cols=57 Identities=9% Similarity=0.154 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceE-EEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKT-ILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~-~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++++++|++++.+++++.+++. ++. ++.+|.||+|+|...
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~-----~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFG-----QSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC------CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeC-----CCcEEEECCEEEECCCcch
Confidence 567777888888999999999999999988888777654 334 699999999999764
No 127
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.87 E-value=5.4e-08 Score=96.65 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.+...+.+.+++.|++++.+++|++++.+++++.+... + .++.+|.||+|+|..
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~-----~-g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTD-----R-GTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEES-----S-CEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEEC-----C-CEEEcCEEEEcCCcC
Confidence 45666777888899999999999999887777766542 2 379999999999976
No 128
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.85 E-value=5.4e-09 Score=99.88 Aligned_cols=50 Identities=34% Similarity=0.435 Sum_probs=42.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceeccccccchhh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLNVGCIPSKA 92 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~~~~p~~~ 92 (507)
.+||+|||||++|+++|+.|++. |++|+|||+...+||.+...++.+...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~ 130 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAM 130 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhh
Confidence 58999999999999999999997 999999999888887776666655443
No 129
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.84 E-value=1.1e-08 Score=101.03 Aligned_cols=137 Identities=18% Similarity=0.124 Sum_probs=75.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccch-hhhhhhhHHHHHHHhhhhhCCcccCcc---
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPS-KALLHSSHMYHEAMHSFASHGVKFSSV--- 117 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 117 (507)
..+||+|||||++|+++|..|++.|++|+|||+.+..++........|. ...+........ +...+......
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~----~~~~~~~~~~~~~~ 85 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDD----VLQGSHTPPTYETW 85 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHH----HHTTCBCCSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHH----HHhhCCCccceEEE
Confidence 3589999999999999999999999999999997766432111111110 000000000111 11111100000
Q ss_pred -------ccChH---HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEccCCceEEEEeCeEEEccCC
Q 010573 118 -------EVDLP---AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDTIEGGNTVVKGKNIIIATGS 186 (507)
Q Consensus 118 -------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~ 186 (507)
..+.. ...-. ...+...+.+.+.+.+++++.+. +..++.+. .+.+.+| .++.+|.||.|+|.
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~----r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g--~~~~ad~vV~AdG~ 158 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMT----RSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTG--EVLEADLIVGADGV 158 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEE----HHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTS--CEEECSEEEECCCT
T ss_pred eCCceeeeccCCCCceEEEC----HHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCC--CEEEcCEEEECCCc
Confidence 00000 00000 12233344455566789998774 54443334 6777777 57999999999998
Q ss_pred CCC
Q 010573 187 DVK 189 (507)
Q Consensus 187 ~p~ 189 (507)
.+.
T Consensus 159 ~s~ 161 (379)
T 3alj_A 159 GSK 161 (379)
T ss_dssp TCH
T ss_pred cHH
Confidence 763
No 130
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.84 E-value=5e-08 Score=96.27 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+..+.+.+.+.+++.|++++.+++|++++.+++++.+++. ++ ++.+|.||+|+|....
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~-----~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTP-----SG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEET-----TE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcC-----Cc-eEEcCEEEECCChhHH
Confidence 3567788888888999999999999999877777766542 33 7999999999998643
No 131
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.83 E-value=2.5e-08 Score=102.41 Aligned_cols=44 Identities=36% Similarity=0.489 Sum_probs=39.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
...+||||||+|+||++||+.|++.|++|+||||.+..||....
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~ 82 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATAL 82 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchh
Confidence 34689999999999999999999999999999999888876543
No 132
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.80 E-value=3.7e-08 Score=98.06 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++.+++|++++.+++++ .+++. ++ ++.+|.||+|+|...
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~-----~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTT-----RG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEET-----TC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeC-----Cc-eEECCEEEECCchhH
Confidence 3677778888889999999999999998776654 35442 23 699999999999765
No 133
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.79 E-value=3.6e-08 Score=97.17 Aligned_cols=56 Identities=9% Similarity=0.192 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++++++|++++.+++++.|++. ++ ++.+|.||+|+|...
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~-----~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCD-----AG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECS-----SE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeC-----CC-EEEcCEEEECCChhH
Confidence 466777888888999999999999999988887666643 34 899999999999643
No 134
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.78 E-value=1.3e-07 Score=92.85 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++.+++|++++.+++++.+++. ++ ++.+|.||+|+|...
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~-----~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETA-----DG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEES-----SC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEEC-----CC-eEEcCEEEEcCCccH
Confidence 356677888888899999999999999887777666543 33 599999999999654
No 135
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.77 E-value=1.3e-09 Score=111.34 Aligned_cols=107 Identities=22% Similarity=0.292 Sum_probs=81.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-----CC----------------------------HHHHH
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----MD----------------------------GEIRK 259 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----~d----------------------------~~~~~ 259 (507)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .+ .++.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 3679999999999999999999999999999988654210 01 45666
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEEc---CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDLS---GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~~---~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.+.+.+++.|++++++++|++++.+ ++.+.+++....+|...++.+|.||+|+|..+...
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 7778888899999999999999764 34566666321022224689999999999988764
No 136
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.77 E-value=1.6e-08 Score=105.13 Aligned_cols=42 Identities=38% Similarity=0.582 Sum_probs=38.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
..+||+|||+|++|+++|..|++.|++|+|+|+.+.+||...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~ 166 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTK 166 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchh
Confidence 357999999999999999999999999999999888887643
No 137
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.73 E-value=3.3e-08 Score=101.60 Aligned_cols=35 Identities=37% Similarity=0.604 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
.++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 35899999999999999999999999999999976
No 138
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.73 E-value=1e-10 Score=122.52 Aligned_cols=65 Identities=17% Similarity=0.154 Sum_probs=47.8
Q ss_pred HHhcCcEEEcCceEEEEEEcCC--e-EEEEEeecCCCceEEEEcCEEEEeecCCCCCCCCCCcccCce
Q 010573 265 LEKQKMKFMLKTKVVGVDLSGD--G-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVE 329 (507)
Q Consensus 265 l~~~Gv~i~~~~~v~~i~~~~~--~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~ 329 (507)
+++.|+++++++.|+++..+++ . ..|++.+..+|+..++.+|.||+|+|..|+...|.+...|..
T Consensus 270 ~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~ 337 (623)
T 3pl8_A 270 APEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQL 337 (623)
T ss_dssp EEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCC
T ss_pred ccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCcc
Confidence 3445999999999999987643 3 346666544556678999999999999999876544444444
No 139
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.72 E-value=3.6e-08 Score=98.23 Aligned_cols=39 Identities=28% Similarity=0.417 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
..+.+||+|||||++|+++|+.|++.|++|+|+|+.+..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 445699999999999999999999999999999997654
No 140
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.70 E-value=2.3e-07 Score=100.95 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
..+...+.+.+++.|++++.+++|++++.+++++. +.+. ++ ++.+|.||+|+|...
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~-----~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTA-----DG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-----TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEEC-----Cc-EEECCEEEECCccch
Confidence 46777888888999999999999999988777654 5442 33 799999999999653
No 141
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.70 E-value=1.2e-08 Score=95.89 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=38.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
+||+||||||||++||..|+++|++|+|+||.+.+||.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 7999999999999999999999999999999999999764
No 142
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.67 E-value=8.6e-08 Score=99.79 Aligned_cols=37 Identities=35% Similarity=0.396 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
.+||||||||+||++||+.|++.|.+|+||||....+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~ 43 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTR 43 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 5799999999999999999999999999999976553
No 143
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.66 E-value=5.4e-07 Score=93.31 Aligned_cols=63 Identities=13% Similarity=0.041 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+..+...+.+.+++.|++++.+++|+++..+++++. +++.+..+++..++.+|.||.|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 346677777888889999999999999988877754 776654455567899999999999653
No 144
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.65 E-value=1.6e-07 Score=90.84 Aligned_cols=41 Identities=24% Similarity=0.342 Sum_probs=37.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
++||+|||||++|+++|..|++.|.+|+|+|+.+..||.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~ 42 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccce
Confidence 36999999999999999999999999999999888887654
No 145
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.63 E-value=1.1e-07 Score=99.09 Aligned_cols=47 Identities=38% Similarity=0.702 Sum_probs=39.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHC------CCcEEEEecCCCCCceeccccccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL------GLKTTCIEKRGALGGTCLNVGCIP 89 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~~~~p 89 (507)
.+||+|||||+||+++|+.|++. |.+|+||||.+.+|+.....+++.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~ 87 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLD 87 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccC
Confidence 48999999999999999999999 999999999887776544334443
No 146
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.63 E-value=3e-07 Score=91.96 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=38.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
+||+|||||++|++||++|++.|++|+|+|+++.+||.+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 48999999999999999999999999999999999988754
No 147
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.60 E-value=5.1e-08 Score=101.12 Aligned_cols=38 Identities=34% Similarity=0.381 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
..+||+|||||++|+++|..|++.|++|+|||+.+...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 35899999999999999999999999999999976543
No 148
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.60 E-value=2.1e-08 Score=107.14 Aligned_cols=41 Identities=34% Similarity=0.703 Sum_probs=37.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCce
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (507)
...+||+|||||++|++||..|++.|++|+|+|+.+.+||.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 34689999999999999999999999999999998888884
No 149
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.59 E-value=1.7e-07 Score=93.16 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=33.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
++||+|||||++|+++|..|++.|.+|+|+|+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 489999999999999999999999999999997654
No 150
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.59 E-value=4.2e-07 Score=88.46 Aligned_cols=95 Identities=21% Similarity=0.293 Sum_probs=78.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---------------------CCC--C---------HHHHHHHH
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------------PSM--D---------GEIRKQFQ 262 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------------------~~~--d---------~~~~~~~~ 262 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ + .++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 369999999999999999999999999999876421 111 0 57778888
Q ss_pred HHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCC
Q 010573 263 RSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 263 ~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
+.+++.|++++++++|++++.+++.+. +++. ++ ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~-----~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARD-----GR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETT-----SC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeC-----CC-EEEeCEEEECCCCC
Confidence 888899999999999999998888777 6643 33 89999999999953
No 151
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.59 E-value=1.9e-07 Score=96.76 Aligned_cols=58 Identities=12% Similarity=0.211 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhc-CcEEEcCceEEEEEEcCCe--EEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 255 GEIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDG--VKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 255 ~~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~--v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
..+.+.+.+.+++. |++++.+ +|++++.++++ +.+++. +++++.+|.||.|+|.....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~-----~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTA-----TGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEET-----TSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEEC-----CCCEEECCEEEECCCCchhh
Confidence 35777788888888 9999999 99999875544 445543 34689999999999987754
No 152
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.59 E-value=4.8e-08 Score=99.86 Aligned_cols=144 Identities=13% Similarity=0.197 Sum_probs=76.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHH--HHhhhhhC----Ccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHE--AMHSFASH----GVK 113 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~----g~~ 113 (507)
+..++||+||||||+|+++|..|++.|.+|+||||.+..+..- ....+.... ...+.. +.+.+... ...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~-r~~~l~~~~----~~~l~~lGl~~~~~~~~~~~~~~ 82 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGES-RGLGFTART----MEVFDQRGILPRFGEVETSTQGH 82 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCC-CSEEECHHH----HHHHHTTTCGGGGCSCCBCCEEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC-CcceECHHH----HHHHHHCCCHHHHHhcccccccc
Confidence 4456899999999999999999999999999999976553210 000111100 000000 00000000 000
Q ss_pred cCccccChHHHHH-HHH---HHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccCCc-eEEEEeCeEEEccC
Q 010573 114 FSSVEVDLPAMMA-QKD---KAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGG-NTVVKGKNIIIATG 185 (507)
Q Consensus 114 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~g~-~~~~~~d~lvlAtG 185 (507)
+....++...+.. ... -....+...+.+.+++.++++..+. +..+ +.+.+++.+.++. ..++.+|+||.|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG 162 (500)
T 2qa1_A 83 FGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDG 162 (500)
T ss_dssp ETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCC
T ss_pred ccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCC
Confidence 0000011100000 000 0012233444555666789988873 4433 5566777765542 34799999999999
Q ss_pred CCC
Q 010573 186 SDV 188 (507)
Q Consensus 186 ~~p 188 (507)
...
T Consensus 163 ~~S 165 (500)
T 2qa1_A 163 GRS 165 (500)
T ss_dssp TTC
T ss_pred cch
Confidence 865
No 153
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.59 E-value=1.3e-07 Score=89.78 Aligned_cols=43 Identities=35% Similarity=0.445 Sum_probs=37.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~ 84 (507)
..+||+|||||++|+++|..|++. |++|+|+|+....||.+..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~ 108 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccc
Confidence 346999999999999999999998 9999999998888765443
No 154
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.57 E-value=1.4e-07 Score=91.70 Aligned_cols=40 Identities=23% Similarity=0.298 Sum_probs=37.2
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCcEEEEecCCCCCceec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~---~g~~V~lie~~~~~GG~~~ 83 (507)
+||+|||||++|+++|+.|++ .|++|+|+||+...||.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~ 44 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMT 44 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcccee
Confidence 699999999999999999999 8999999999988888654
No 155
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.57 E-value=3.9e-08 Score=97.65 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=33.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
..+||+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 3579999999999999999999999999999997653
No 156
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.56 E-value=5.1e-07 Score=89.96 Aligned_cols=38 Identities=26% Similarity=0.503 Sum_probs=34.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCc-EEEEecCCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLK-TTCIEKRGALG 79 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~-V~lie~~~~~G 79 (507)
..+||+|||||++|+++|..|++.|.+ |+|+|+.+.++
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 458999999999999999999999999 99999977654
No 157
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.56 E-value=3.9e-07 Score=90.44 Aligned_cols=38 Identities=29% Similarity=0.490 Sum_probs=34.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
+..+||+|||||++|+++|..|++.|.+|+|||+.+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 45689999999999999999999999999999997654
No 158
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.54 E-value=8.2e-07 Score=91.74 Aligned_cols=38 Identities=37% Similarity=0.635 Sum_probs=34.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
..+||+|||||++|+++|+.|++.|.+|+||||.+..+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 35899999999999999999999999999999976553
No 159
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.54 E-value=1.1e-07 Score=94.39 Aligned_cols=35 Identities=23% Similarity=0.534 Sum_probs=32.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
++||+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 37999999999999999999999999999999653
No 160
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.53 E-value=2.8e-07 Score=96.11 Aligned_cols=37 Identities=35% Similarity=0.526 Sum_probs=33.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
.+||||||||+||++||+.|++.|.+|+||||....+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 4799999999999999999999999999999976443
No 161
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.53 E-value=2.8e-07 Score=88.86 Aligned_cols=99 Identities=20% Similarity=0.290 Sum_probs=80.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---------------CCC----CHHHHHHHHHHHHhcCcEEEcC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------PSM----DGEIRKQFQRSLEKQKMKFMLK 275 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------------~~~----d~~~~~~~~~~l~~~Gv~i~~~ 275 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999876421 111 2567778888888899999999
Q ss_pred ceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecC---CCCCC
Q 010573 276 TKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGR---TPFTA 319 (507)
Q Consensus 276 ~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~---~p~~~ 319 (507)
++|++++..++ .+.+.+. ++ ++.+|.||+|+|. .|...
T Consensus 88 ~~v~~i~~~~~~~~~v~~~-----~g-~~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 88 QAVESVEKQADGVFKLVTN-----EE-THYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp CCEEEEEECTTSCEEEEES-----SE-EEEEEEEEECCTTSCCEECCC
T ss_pred CEEEEEEECCCCcEEEEEC-----CC-EEEeCEEEECCCCCcCCCCCC
Confidence 99999988766 5667664 34 4999999999999 77654
No 162
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.52 E-value=3.5e-07 Score=87.73 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=79.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc--Ccc--------CCCC----CHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA--ADI--------VPSM----DGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~--~~~--------~~~~----d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+ .+.+ ..++...+.+.+++.|++++. +++++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999985 111 1222 246777788888889999999 89999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+..+++.+.+.+. ++.++.+|.+|+|+|..|....
T Consensus 95 i~~~~~~~~v~~~-----~g~~~~~d~lvlAtG~~~~~~~ 129 (323)
T 3f8d_A 95 IENRGDEFVVKTK-----RKGEFKADSVILGIGVKRRKLG 129 (323)
T ss_dssp EEEC--CEEEEES-----SSCEEEEEEEEECCCCEECCCC
T ss_pred EEecCCEEEEEEC-----CCCEEEcCEEEECcCCCCccCC
Confidence 9887777777764 4468999999999999987643
No 163
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.50 E-value=3.9e-07 Score=92.12 Aligned_cols=35 Identities=34% Similarity=0.530 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
.+||+|||||+||+++|..|++.|++|+|+|+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 48999999999999999999999999999999764
No 164
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.49 E-value=3.5e-06 Score=87.41 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 254 DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 254 d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+..+...+.+..++.|++++.+++|+++..+++.+. +++.+..++++.++.+|.||+|+|...
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 345666677778889999999999999988776643 665543344555899999999999653
No 165
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.49 E-value=1.1e-06 Score=89.05 Aligned_cols=106 Identities=21% Similarity=0.307 Sum_probs=81.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---cCCe---eEEEcccCccC---C----------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWAR---LGSE---VTVVEFAADIV---P---------------------------------- 251 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~---~g~~---Vtlv~~~~~~~---~---------------------------------- 251 (507)
++|+|||+|+.|+.+|..|++ .|.+ |+++++.+.+. .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 99999876431 0
Q ss_pred CC---------------CHHHHHHHHHHHHhcCcE--EEcCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEee
Q 010573 252 SM---------------DGEIRKQFQRSLEKQKMK--FMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSA 312 (507)
Q Consensus 252 ~~---------------d~~~~~~~~~~l~~~Gv~--i~~~~~v~~i~~~~~--~v~v~~~~~~~g~~~~i~~D~vi~a~ 312 (507)
.+ ..++.+.+.+.+++.|++ ++++++|+.++..++ ...|++.+..++...++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 034556677777778988 899999999987665 66777654333334679999999999
Q ss_pred c--CCCCCCC
Q 010573 313 G--RTPFTAG 320 (507)
Q Consensus 313 G--~~p~~~~ 320 (507)
| ..|+...
T Consensus 163 G~~s~p~~p~ 172 (464)
T 2xve_A 163 GHFSTPYVPE 172 (464)
T ss_dssp CSSSSBCCCC
T ss_pred CCCCCCccCC
Confidence 9 6776543
No 166
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.49 E-value=7.5e-08 Score=98.40 Aligned_cols=142 Identities=15% Similarity=0.208 Sum_probs=75.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHH--HhhhhhC----CcccC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA--MHSFASH----GVKFS 115 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~----g~~~~ 115 (507)
.++||+||||||+|+++|..|++.|.+|+|||+.+..+... ....+.... ...+..+ .+.+... ...+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~-r~~~l~~~~----~~~l~~lGl~~~~~~~~~~~~~~~~ 85 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGES-RGLGFTART----MEVFDQRGILPAFGPVETSTQGHFG 85 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCC-CSEEECHHH----HHHHHHTTCGGGGCSCCEESEEEET
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC-ceeEECHHH----HHHHHHCCCHHHHHhccccccceec
Confidence 46899999999999999999999999999999976553210 000111100 0001000 0000000 00000
Q ss_pred ccccChHHHH---HH-HHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccCCc-eEEEEeCeEEEccCCC
Q 010573 116 SVEVDLPAMM---AQ-KDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGG-NTVVKGKNIIIATGSD 187 (507)
Q Consensus 116 ~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~g~-~~~~~~d~lvlAtG~~ 187 (507)
...++...+. +. ..-....+...+.+.+++.++++..+. +..+ +.+.+++.+.++. ..++.+|+||.|.|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 86 GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 0000000000 00 000012233444555666789988873 4433 4556677665542 3479999999999986
Q ss_pred C
Q 010573 188 V 188 (507)
Q Consensus 188 p 188 (507)
.
T Consensus 166 S 166 (499)
T 2qa2_A 166 S 166 (499)
T ss_dssp C
T ss_pred c
Confidence 5
No 167
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.48 E-value=4.1e-07 Score=90.47 Aligned_cols=37 Identities=35% Similarity=0.423 Sum_probs=33.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGALG 79 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~G 79 (507)
.+||+|||||++|+++|+.|++. |++|+|||+....+
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~ 74 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPN 74 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 48999999999999999999999 99999999965443
No 168
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.48 E-value=1.2e-06 Score=84.62 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=77.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---------------CCC----CHHHHHHHHHHHHhcCcEEEcC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------PSM----DGEIRKQFQRSLEKQKMKFMLK 275 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------------~~~----d~~~~~~~~~~l~~~Gv~i~~~ 275 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++...+.+.+++.+++++.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999876431 111 1466677778888889999999
Q ss_pred ceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 276 TKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 276 ~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
+.|+.++.+++.+.+.+. ++.++.+|.||+|+|..
T Consensus 86 ~~v~~i~~~~~~~~v~~~-----~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGDLFKVTTS-----QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETTEEEEEET-----TSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCCEEEEEEC-----CCCEEEeCEEEECCCCC
Confidence 999999887766666653 34579999999999984
No 169
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.48 E-value=6.1e-08 Score=99.69 Aligned_cols=45 Identities=31% Similarity=0.382 Sum_probs=39.9
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHH-CCCcEEEEecCCCCCceec
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~~GG~~~ 83 (507)
.....+||+|||||++||+||++|++ .|++|+|+|+++++||.|.
T Consensus 6 ~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 6 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 33446899999999999999999987 4999999999999999764
No 170
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.47 E-value=6.4e-07 Score=86.55 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=83.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC----cc------------CCCC-----CHHHHHHHHHHHHhcCcEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA----DI------------VPSM-----DGEIRKQFQRSLEKQKMKF 272 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~----~~------------~~~~-----d~~~~~~~~~~l~~~Gv~i 272 (507)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ .+.+ .+++...+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 5789999999999999999999999999999844 11 1122 2477788888999999999
Q ss_pred EcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 273 MLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 273 ~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.++ ++.++.+++.+.+.+.. ..++.++.+|.+|+|+|.+|....
T Consensus 102 ~~~~-v~~i~~~~~~~~v~~~~--~~~~~~~~~d~vvlAtG~~~~~~~ 146 (338)
T 3itj_A 102 ITET-VSKVDLSSKPFKLWTEF--NEDAEPVTTDAIILATGASAKRMH 146 (338)
T ss_dssp ECSC-EEEEECSSSSEEEEETT--CSSSCCEEEEEEEECCCEEECCCC
T ss_pred EEeE-EEEEEEcCCEEEEEEEe--cCCCcEEEeCEEEECcCCCcCCCC
Confidence 9988 99998877777776531 224567999999999999887653
No 171
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.46 E-value=1.7e-06 Score=87.15 Aligned_cols=106 Identities=19% Similarity=0.181 Sum_probs=80.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCccC---CC------------------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIV---PS------------------------------------ 252 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~---~~------------------------------------ 252 (507)
..+|+|||+|+.|+.+|..|++.|. +|+++++.+.+. ..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999999 999999875331 00
Q ss_pred -------------C--------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCc-eEEEE
Q 010573 253 -------------M--------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGE-KTILE 304 (507)
Q Consensus 253 -------------~--------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~-~~~i~ 304 (507)
+ ..++.+.+.+..++.+..++++++|+.++..++.+.+++.+..+|. ..++.
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~ 165 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDI 165 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEE
Confidence 0 0144556666666667889999999999888888888876422233 34799
Q ss_pred cCEEEEeecC--CCCCC
Q 010573 305 ADVVLVSAGR--TPFTA 319 (507)
Q Consensus 305 ~D~vi~a~G~--~p~~~ 319 (507)
+|.||+|+|. .|+..
T Consensus 166 ~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 166 FDAVSICNGHYEVPYIP 182 (447)
T ss_dssp ESEEEECCCSSSSBCBC
T ss_pred eCEEEECCCCCCCCCCC
Confidence 9999999998 66654
No 172
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.46 E-value=6.2e-07 Score=94.18 Aligned_cols=36 Identities=36% Similarity=0.436 Sum_probs=33.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
.+||||||||.||++||++|++.|.+|+||||....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 479999999999999999999999999999997654
No 173
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.45 E-value=1.1e-07 Score=94.25 Aligned_cols=48 Identities=23% Similarity=0.360 Sum_probs=42.2
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCCCCCceeccc
Q 010573 38 ASASDENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGALGGTCLNV 85 (507)
Q Consensus 38 ~~~~~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~ 85 (507)
++|..++||+|||||++|++||..|++. |++|+|+|+++.+||.|...
T Consensus 2 ~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 2 QPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp --CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred CcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 4456679999999999999999999999 99999999999999998653
No 174
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.45 E-value=1e-06 Score=88.93 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=33.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGAL 78 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~ 78 (507)
.++||+|||||++|+++|++|++.| .+|+|||++..+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 4689999999999999999999999 999999994433
No 175
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.45 E-value=3.9e-07 Score=87.49 Aligned_cols=49 Identities=27% Similarity=0.282 Sum_probs=40.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC------CCceeccccccchh
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA------LGGTCLNVGCIPSK 91 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~------~GG~~~~~~~~p~~ 91 (507)
++||+|||||+||+.||+.|++.|++|+|+|++.. ..+.+....|.|+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSi 55 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSL 55 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEE
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCC
Confidence 37999999999999999999999999999998762 23555666677754
No 176
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.45 E-value=8e-07 Score=93.67 Aligned_cols=43 Identities=23% Similarity=0.414 Sum_probs=37.2
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHH-CCCcEEEEecCCCCC
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGALG 79 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~~G 79 (507)
|.++...+||+||||||+|+++|..|++ .|.+|+||||.+..+
T Consensus 26 m~~~~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 26 TEAVPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp CSSCCSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred cCCCCCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 4445567899999999999999999999 999999999976543
No 177
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.45 E-value=1.5e-06 Score=82.99 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=78.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCc-----------cCCCC----C-HHHHHHHHHHHHhcCcEEEcCceE
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAAD-----------IVPSM----D-GEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~-----------~~~~~----d-~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
+++|||+|+.|+.+|..|++.|. +|+++++... ..+.+ + +++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999997531 01221 2 46677778888889999997 789
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+.++.+++.+.+.+. +++++.+|.+|+|+|..|...
T Consensus 82 ~~i~~~~~~~~v~~~-----~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 82 QRVSKKDSHFVILAE-----DGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp EEEEEETTEEEEEET-----TSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEcCCEEEEEEc-----CCCEEECCEEEECCCCCCCCC
Confidence 999877776666653 446899999999999888654
No 178
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.44 E-value=1e-06 Score=83.30 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=78.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc---------CCCC----CHHHHHHHHHHHHhc-CcEEEcCceEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI---------VPSM----DGEIRKQFQRSLEKQ-KMKFMLKTKVVG 280 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---------~~~~----d~~~~~~~~~~l~~~-Gv~i~~~~~v~~ 280 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. .+.. ..++...+.+.+++. +++++. .+++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEE
Confidence 47999999999999999999999999999964321 1111 146667777777776 788875 58999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
++.+++...+++. +++++.+|.+|+|+|..|...
T Consensus 82 i~~~~~~~~v~~~-----~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGEFIVEID-----GGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTEEEEEET-----TSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCeEEEEEC-----CCCEEEcCEEEECCCCCCCCC
Confidence 9888877777764 456899999999999988764
No 179
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.43 E-value=9.5e-07 Score=90.49 Aligned_cols=99 Identities=19% Similarity=0.333 Sum_probs=79.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc------------------------------------C------C
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI------------------------------------V------P 251 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~------------------------------------~------~ 251 (507)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ + +
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987432 0 0
Q ss_pred CC------------------------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCce
Q 010573 252 SM------------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEK 300 (507)
Q Consensus 252 ~~------------------------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~ 300 (507)
.. ...+.+.+.+.+++.|++++++++|++++.+++++. +++. ++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~-----~G 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS-----NG 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEET-----TS
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEEC-----CC
Confidence 00 034556677778889999999999999988776654 6654 45
Q ss_pred EEEEcCEEEEeecCCCC
Q 010573 301 TILEADVVLVSAGRTPF 317 (507)
Q Consensus 301 ~~i~~D~vi~a~G~~p~ 317 (507)
+++.+|.||+|+|..+.
T Consensus 262 ~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp CEEECSCEEECCCTTCH
T ss_pred CEEECCEEEECCCCChh
Confidence 68999999999999885
No 180
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.42 E-value=2.4e-06 Score=87.40 Aligned_cols=39 Identities=36% Similarity=0.463 Sum_probs=34.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCce
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGT 81 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 81 (507)
++||+|||||++|+++|+.|++.|++|+|+|+++..+|.
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gt 41 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACAT 41 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCc
Confidence 589999999999999999999999999999997644443
No 181
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.41 E-value=2.1e-07 Score=93.98 Aligned_cols=47 Identities=23% Similarity=0.334 Sum_probs=42.0
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 38 ASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 38 ~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
..|...+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 6 ~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 6 ETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp -CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred hhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 34556789999999999999999999999999999999999998754
No 182
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.41 E-value=2.3e-06 Score=83.58 Aligned_cols=98 Identities=14% Similarity=0.188 Sum_probs=78.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---------------CCC----CHHHHHHHHHHHHhcCcEEEc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------------PSM----DGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------------~~~----d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 3579999999999999999999999999999876431 111 156777778888888999999
Q ss_pred CceEEEEEEcCC-eEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 275 KTKVVGVDLSGD-GVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 275 ~~~v~~i~~~~~-~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
++.|+.++.+++ .+.+++. +++++.+|.+|+|+|..+
T Consensus 94 ~~~v~~i~~~~~~~~~v~~~-----~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 94 NETVTKYTKLDDGTFETRTN-----TGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp SCCEEEEEECTTSCEEEEET-----TSCEEEEEEEEECCTTCS
T ss_pred CCEEEEEEECCCceEEEEEC-----CCcEEEeeEEEEccCCCc
Confidence 999999987654 5666653 446799999999999854
No 183
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.40 E-value=8.9e-07 Score=87.22 Aligned_cols=99 Identities=15% Similarity=0.270 Sum_probs=75.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---CCCC---------HHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---PSMD---------GEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~d---------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
-+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. +.+. .++.....+.+++.||+++++++|++++
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id 89 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSID 89 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEE
Confidence 479999999999999999988889999999877531 1111 1111223466778899999999999997
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.++.. +++. +++++.+|.+|+|||.+|....
T Consensus 90 ~~~~~--v~~~-----~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 90 PNNKL--VTLK-----SGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp TTTTE--EEET-----TSCEEECSEEEECCCEEECCCC
T ss_pred CCCCE--EEEC-----CCCEEECCEEEEecCCCcCCCC
Confidence 66654 4443 5578999999999999987653
No 184
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.40 E-value=1.4e-06 Score=89.99 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHH---CCCcEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~---~g~~V~lie~~~ 76 (507)
..+||+|||||++|+++|..|++ .|.+|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 35899999999999999999999 999999999954
No 185
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.40 E-value=1.1e-06 Score=91.05 Aligned_cols=38 Identities=29% Similarity=0.460 Sum_probs=34.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
..+||+||||||+|+++|..|++.|.+|+||||.+..+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 45899999999999999999999999999999977654
No 186
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.39 E-value=8.3e-07 Score=91.43 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHH------------CCCcEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQ------------LGLKTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~------------~g~~V~lie~~~ 76 (507)
..+||+|||||+||+++|..|++ .|++|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 45899999999999999999999 899999999964
No 187
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.36 E-value=2.4e-06 Score=84.62 Aligned_cols=97 Identities=23% Similarity=0.311 Sum_probs=76.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-----------------CC-------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-----------------PS------------------------- 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------~~------------------------- 252 (507)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 369999999999999999999999999999876431 00
Q ss_pred ----------------------CCHHHHHHHHHHHHhcCcEEEcCceEEEEEEc----CCeEEEEEeecCCCceEEEEcC
Q 010573 253 ----------------------MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS----GDGVKLTLEPAAGGEKTILEAD 306 (507)
Q Consensus 253 ----------------------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~----~~~v~v~~~~~~~g~~~~i~~D 306 (507)
...++.+.+.+.+++.|++++++++++++..+ ++++.+++. ++ ++.+|
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~-----~g-~i~ad 158 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN-----ST-QWQCK 158 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET-----TE-EEEES
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC-----CC-EEECC
Confidence 12345566777888899999999999999866 555666542 33 79999
Q ss_pred EEEEeecCCCC
Q 010573 307 VVLVSAGRTPF 317 (507)
Q Consensus 307 ~vi~a~G~~p~ 317 (507)
.||+|+|..+.
T Consensus 159 ~VVlAtG~~s~ 169 (401)
T 2gqf_A 159 NLIVATGGLSM 169 (401)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999999884
No 188
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.34 E-value=4.4e-07 Score=91.20 Aligned_cols=98 Identities=19% Similarity=0.347 Sum_probs=75.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---cCCeeEEEcccCcc--CC---------CCCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAADI--VP---------SMDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~--~~---------~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+ .+ ....++...+.+.+++.||+++ ..+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~-~~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFI-AQSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEE-CSCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEE-EeEEEE
Confidence 689999999999999999999 79999999988864 11 1112333345677788999998 568999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
++.+++ .+++. +++++.+|.+|+|+|.+|+...
T Consensus 84 id~~~~--~V~~~-----~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQ--NITLA-----DGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTT--EEEET-----TSCEEECSEEEECCCCEECGGG
T ss_pred EEcCCC--EEEEC-----CCCEEECCEEEECCCCCcCccc
Confidence 976555 34443 4568999999999999987653
No 189
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.33 E-value=2.6e-06 Score=83.81 Aligned_cols=97 Identities=20% Similarity=0.325 Sum_probs=77.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-----------------------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS----------------------------------------- 252 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 252 (507)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred ---CC-----------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 253 ---MD-----------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 253 ---~d-----------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
++ ..+.+.+.+.+++.|++++.+++|++++. ++ .+++. +++++.+|.||.|+|..+..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~-----~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQ-----TGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEET-----TSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEEC-----CCCEEEcCEEEECCCccHHH
Confidence 00 34566677788888999999999999976 33 66654 34589999999999988754
No 190
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.32 E-value=4.6e-07 Score=88.25 Aligned_cols=48 Identities=21% Similarity=0.392 Sum_probs=42.9
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC-CCCCceecc
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR-GALGGTCLN 84 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~~GG~~~~ 84 (507)
.+++...+||+|||||++|++||+.|++.|++|+|+|++ +.+||.|..
T Consensus 38 ~~~~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 38 LNPPGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp SSSCCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CCCCCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 444556789999999999999999999999999999999 899998764
No 191
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.31 E-value=4.5e-06 Score=81.67 Aligned_cols=97 Identities=21% Similarity=0.351 Sum_probs=75.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccC------c------c-CCC----------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAA------D------I-VPS---------------------------- 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~------~------~-~~~---------------------------- 252 (507)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ . + .+.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 469999999999999999999999 999999875 0 0 000
Q ss_pred CC-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 MD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 ~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+ .++...+.+.+++.|++++.++.|++++.+++.+.+... ++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~-----~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATT-----TE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEES-----SC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeC-----CC-EEEeCEEEECCCCCCc
Confidence 01 345556677778889999999999999877666776653 22 5899999999998764
No 192
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.31 E-value=2.5e-06 Score=81.37 Aligned_cols=99 Identities=24% Similarity=0.282 Sum_probs=77.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEE-EcccCc---c--------CCCCC-----HHHHHHHHHHHHhcCcEEEcCc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTV-VEFAAD---I--------VPSMD-----GEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtl-v~~~~~---~--------~~~~d-----~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
..+|+|||+|+.|+.+|..|++.|.+|++ +++... + .+.++ .++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV- 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-
Confidence 35899999999999999999999999999 887321 0 12222 577788888889999999988
Q ss_pred eEEEEEEcC--CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 277 KVVGVDLSG--DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 277 ~v~~i~~~~--~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
++..+ .++ +.+.+.+.. ++ ++.+|.+|+|+|..|...
T Consensus 83 ~v~~i-~~~~~~~~~v~~~~----~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 GVEQI-LKNSDGSFTIKLEG----GK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp CEEEE-EECTTSCEEEEETT----SC-EEEEEEEEECCCEEECCC
T ss_pred EEEEE-ecCCCCcEEEEEec----CC-EEEeCEEEEeeCCCCCCC
Confidence 88888 665 566643431 33 899999999999988764
No 193
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.31 E-value=3.5e-06 Score=80.91 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=76.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-----------IVPSM-----DGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-----------~~~~~-----d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++.|++++. ..+
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 5799999999999999999999999999998721 01122 246667778888889999987 688
Q ss_pred EEEEEc--CCe-EEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 279 VGVDLS--GDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 279 ~~i~~~--~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+.++.+ ++. +.+.+. +++++.+|.+|+|+|.+|...
T Consensus 88 ~~i~~~~~~~~~~~v~~~-----~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRG-----YNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSSCCEEEEE-----SSCEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEEC-----CCCEEEeCEEEECcCCCcCCC
Confidence 888765 443 455543 446899999999999988654
No 194
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.31 E-value=5.6e-07 Score=90.09 Aligned_cols=44 Identities=32% Similarity=0.659 Sum_probs=40.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCCceecc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~GG~~~~ 84 (507)
...+||+|||||++|++||+.|++.| ++|+|+|+++.+||.+..
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 34689999999999999999999999 999999999999997654
No 195
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.30 E-value=2.3e-06 Score=90.06 Aligned_cols=35 Identities=49% Similarity=0.685 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHH---H-CCCcEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAA---Q-LGLKTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~---~-~g~~V~lie~~~~ 77 (507)
.+||||||||+||++||+.|+ + .|.+|+||||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 489999999999999999999 6 8999999999764
No 196
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.30 E-value=2.4e-06 Score=81.44 Aligned_cols=99 Identities=11% Similarity=0.159 Sum_probs=76.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC--ccC-----C------C-CCHHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA--DIV-----P------S-MDGEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~--~~~-----~------~-~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+|+|||+|+.|+.+|..+++.|.+|+++++.. .+. + . ..+++...+.+.+++.|++++.+++++.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999996531 110 0 0 12467777888888899999999999999
Q ss_pred EEcC---CeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 282 DLSG---DGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 282 ~~~~---~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
..+. +...+.+. +++++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~v~~~-----~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 83 IPAAVEGGLHQIETA-----SGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp ECCSSTTCCEEEEET-----TSCEEEEEEEEECCCEEECCC
T ss_pred EecccCCceEEEEEC-----CCCEEEeCEEEECcCCCcCCC
Confidence 6542 25566654 345799999999999988654
No 197
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.27 E-value=6.3e-07 Score=89.26 Aligned_cols=101 Identities=21% Similarity=0.256 Sum_probs=76.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---cCCeeEEEcccCccC--CC---------CCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAADIV--PS---------MDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~~--~~---------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. +. ...++...+.+.+++.|++++.+ +++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 899999999887541 11 12233444667778889999987 8999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
++.++..+. +.+. .+...++.+|.+|+|+|.+|+..
T Consensus 81 i~~~~~~V~--~~~g-~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAKSSMVY--YTKP-DGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETTTTEEE--EECT-TSCEEEEECSEEEECCCCEECGG
T ss_pred EeCCCCEEE--EccC-CcccceeeCCEEEECCCCCcCcc
Confidence 876655444 3321 22235699999999999998765
No 198
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.27 E-value=2.6e-06 Score=84.50 Aligned_cols=99 Identities=19% Similarity=0.342 Sum_probs=78.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-------------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------------------- 251 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 251 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+....
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998654300
Q ss_pred --C--------------CC-HHHHHHHHHHHHhc-CcEEEcCceEEEEEEcCCeE--EEEEeecCCCceEEEEcCEEEEe
Q 010573 252 --S--------------MD-GEIRKQFQRSLEKQ-KMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVS 311 (507)
Q Consensus 252 --~--------------~d-~~~~~~~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v--~v~~~~~~~g~~~~i~~D~vi~a 311 (507)
. ++ ..+.+.+.+.+++. |++++++++|++++.+++++ .+++. +++++.+|.||.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~-----~g~~~~ad~vV~A 161 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLN-----DGRVLRPRVVVGA 161 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEET-----TSCEEEEEEEEEC
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEEC-----CCCEEECCEEEEC
Confidence 0 00 24455666777776 99999999999998887777 77764 3458999999999
Q ss_pred ecCCCCC
Q 010573 312 AGRTPFT 318 (507)
Q Consensus 312 ~G~~p~~ 318 (507)
+|..+..
T Consensus 162 dG~~s~v 168 (399)
T 2x3n_A 162 DGIASYV 168 (399)
T ss_dssp CCTTCHH
T ss_pred CCCChHH
Confidence 9987653
No 199
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.27 E-value=7.9e-06 Score=82.50 Aligned_cols=97 Identities=22% Similarity=0.356 Sum_probs=68.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||++|+.+|..|++.|.+|+|+|+.+.+. |. ..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l---------~~----~~-------------------------- 207 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL---------PT----MD-------------------------- 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC---------TT----SC--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc---------cc----cC--------------------------
Confidence 4689999999999999999999999999999865431 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+++++.+ .+..++ .+.+.+.+.++ .++.+|.||+|+|.+|..
T Consensus 208 ----------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 ----------LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGG--EVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEECC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCC--eEEEcCEEEECcCCCcCC
Confidence 011122334556678998877 344443 44566666666 679999999999998853
No 200
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.26 E-value=2.1e-06 Score=86.63 Aligned_cols=102 Identities=22% Similarity=0.408 Sum_probs=77.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC--CC-----CCH------HHHHHHHHHHHhcCcEEEcCceEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--PS-----MDG------EIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~--~~-----~d~------~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. +. ... ++.....+.+++.|++++.+++++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999887642 11 001 111113466778899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.++.+++.+.+... +++.++.+|.+|+|+|.+|....
T Consensus 83 ~id~~~~~v~v~~~----~~~~~~~~d~lviAtG~~p~~p~ 119 (452)
T 3oc4_A 83 AMDVENQLIAWTRK----EEQQWYSYDKLILATGASQFSTQ 119 (452)
T ss_dssp EEETTTTEEEEEET----TEEEEEECSEEEECCCCCBCCCC
T ss_pred EEECCCCEEEEEec----CceEEEEcCEEEECCCcccCCCC
Confidence 99877777766521 25678999999999999987653
No 201
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.26 E-value=3.7e-06 Score=83.30 Aligned_cols=99 Identities=18% Similarity=0.296 Sum_probs=75.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC------CCHHHHHH---------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS------MDGEIRKQ--------------------------- 260 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------~d~~~~~~--------------------------- 260 (507)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+...+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653211 22222221
Q ss_pred ----------------HHHHHHh--cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 261 ----------------FQRSLEK--QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 261 ----------------~~~~l~~--~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+.+.|.+ .|++++++++|++++.+++++.+++. +++++.+|.||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFS-----DGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEET-----TSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEEC-----CCCEEECCEEEECCCcchh
Confidence 2222222 37899999999999988888888875 4568999999999998764
No 202
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.25 E-value=7.8e-07 Score=87.36 Aligned_cols=44 Identities=27% Similarity=0.491 Sum_probs=40.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
...+||+|||||++|+++|..|++.|++|+|+|+++.+||.|..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 45689999999999999999999999999999999999998764
No 203
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.25 E-value=5.5e-06 Score=79.34 Aligned_cols=98 Identities=19% Similarity=0.244 Sum_probs=76.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc---c--------CCCC----CHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD---I--------VPSM----DGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------~~~~----d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
.+++|||+|+.|+.+|..|++.|.+|+++++... . .+.+ ..++...+.+.+++.|++++. .+++
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 5799999999999999999999999999997421 0 1111 245667777888889999988 7899
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.++.+++.+.+.+ ++.++.+|.+|+|+|..|...
T Consensus 96 ~i~~~~~~~~v~~------~~~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 96 SIKKTQGGFDIET------NDDTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp EEEEETTEEEEEE------SSSEEEEEEEEECCCEEECCC
T ss_pred EEEEeCCEEEEEE------CCCEEEeCEEEECCCCCcccC
Confidence 9987777666654 234799999999999887654
No 204
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.25 E-value=5.7e-07 Score=92.58 Aligned_cols=43 Identities=37% Similarity=0.601 Sum_probs=39.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
.++||+|||||+||++||..|++.|++|+|+|+++.+||.+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 3579999999999999999999999999999999999998643
No 205
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.24 E-value=3.2e-06 Score=87.22 Aligned_cols=100 Identities=23% Similarity=0.312 Sum_probs=79.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--------C-------------CC----------------CHHH
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------P-------------SM----------------DGEI 257 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------~-------------~~----------------d~~~ 257 (507)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .+ .+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 579999999999999999999999999999865321 0 01 1466
Q ss_pred HHHHHHHHHhcCc--EEEcCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeec--CCCCCC
Q 010573 258 RKQFQRSLEKQKM--KFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAG--RTPFTA 319 (507)
Q Consensus 258 ~~~~~~~l~~~Gv--~i~~~~~v~~i~~~~~--~v~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~~ 319 (507)
.+.+.+..++.|+ +++++++|++++.+++ .+.+++. +++++.+|.||+|+| ..|...
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~-----~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD-----RGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEET-----TCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEEC-----CCCEEEeCEEEECcCCCCCCCCC
Confidence 7777888888888 8999999999987665 5666654 456799999999999 566554
No 206
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.24 E-value=3.3e-06 Score=81.39 Aligned_cols=98 Identities=21% Similarity=0.276 Sum_probs=77.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcc----cCcc------------CCCC-----CHHHHHHHHHHHHhcCcEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEF----AADI------------VPSM-----DGEIRKQFQRSLEKQKMKFM 273 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~----~~~~------------~~~~-----d~~~~~~~~~~l~~~Gv~i~ 273 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+.+ ..++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999997 2211 1111 24667777888888999999
Q ss_pred cCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 274 LKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 274 ~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.++ ++.++.+++.+.+++ ++.++.+|.+|+|+|.+|...
T Consensus 89 ~~~-v~~i~~~~~~~~v~~------~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 89 TET-VTKVDFSSKPFKLFT------DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp CCC-CCEEECSSSSEEEEC------SSEEEEEEEEEECCCEEECCC
T ss_pred EeE-EEEEEEcCCEEEEEE------CCcEEEcCEEEECCCCCcCCC
Confidence 886 888877666666654 346899999999999988654
No 207
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=1.7e-06 Score=84.66 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=72.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC---C--------CCH-HHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP---S--------MDG-EIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~--------~d~-~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.+.+++|||+|+.|+.+|..+++.| +|+++++.+.... . .+. ++.....+.+++.|++++.++.++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4688999999999999999999999 9999998765311 0 111 1111234556778999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
++..... ++ . +++++.+|.+|+|||.+|....
T Consensus 86 id~~~~~--V~-~-----~g~~~~~d~lViATGs~p~~p~ 117 (367)
T 1xhc_A 86 IDRGRKV--VI-T-----EKGEVPYDTLVLATGARAREPQ 117 (367)
T ss_dssp EETTTTE--EE-E-----SSCEEECSEEEECCCEEECCCC
T ss_pred EECCCCE--EE-E-----CCcEEECCEEEECCCCCCCCCC
Confidence 8654433 33 2 4468999999999999987653
No 208
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.22 E-value=5.6e-06 Score=79.21 Aligned_cols=98 Identities=15% Similarity=0.232 Sum_probs=76.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc-----------cCCCC-----CHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-----------IVPSM-----DGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-----------~~~~~-----d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ .+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999985320 01112 24667777888888999999886 8
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+.++.+++.+.+ +. ++.++.+|.+|+|+|.+|...
T Consensus 85 ~~i~~~~~~~~v-~~-----~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 85 NKVDLQNRPFRL-NG-----DNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp EEEECSSSSEEE-EE-----SSCEEEEEEEEECCCEEECCC
T ss_pred eEEEecCCEEEE-Ee-----CCCEEEcCEEEECCCCCcCCC
Confidence 888776666666 33 456899999999999988654
No 209
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.22 E-value=6.9e-06 Score=84.49 Aligned_cols=100 Identities=22% Similarity=0.237 Sum_probs=78.8
Q ss_pred CeEEEEcCcHHHHHHHHHHH-hcCCeeEEEcccCccC--------C-------------CC----------------CHH
Q 010573 215 KKLVVIGAGYIGLEMGSVWA-RLGSEVTVVEFAADIV--------P-------------SM----------------DGE 256 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~-~~g~~Vtlv~~~~~~~--------~-------------~~----------------d~~ 256 (507)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+. + .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 9999999999865331 0 01 235
Q ss_pred HHHHHHHHHHhcCc--EEEcCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeecC--CCCCC
Q 010573 257 IRKQFQRSLEKQKM--KFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAGR--TPFTA 319 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv--~i~~~~~v~~i~~~~~--~v~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~~ 319 (507)
+.+.+.+..++.|+ .++++++|++++.+++ .+.+++. +++++.+|.||+|+|. +|...
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~-----~G~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTD-----HGEVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEET-----TSCEEEEEEEEECCCSCCSBCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEc-----CCCEEEeCEEEECCcccccCCCC
Confidence 66777788888898 8999999999987665 6667664 4568999999999994 66544
No 210
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.22 E-value=8.2e-06 Score=78.65 Aligned_cols=97 Identities=13% Similarity=0.178 Sum_probs=71.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--------------------CCCCHHHHHHHHH-----------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------------------PSMDGEIRKQFQR----------- 263 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------------------~~~d~~~~~~~~~----------- 263 (507)
.+|+|||+|.+|+.+|..|++.|.+|+++++.+.+. ...++.+.+.+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 479999999999999999999999999999876431 1112333333222
Q ss_pred --------------------------------HHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEE-EcCEEEE
Q 010573 264 --------------------------------SLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTIL-EADVVLV 310 (507)
Q Consensus 264 --------------------------------~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i-~~D~vi~ 310 (507)
.+. .|++++++++|++++.+++++.+++. +++.+ .+|.||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~-----~g~~~~~a~~vV~ 156 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDA-----EGQNHGPFSHVII 156 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEET-----TSCEEEEESEEEE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeC-----CCcCccccCEEEE
Confidence 222 28899999999999988888887754 33444 5999999
Q ss_pred eecCCCC
Q 010573 311 SAGRTPF 317 (507)
Q Consensus 311 a~G~~p~ 317 (507)
|+|....
T Consensus 157 a~g~~~~ 163 (336)
T 1yvv_A 157 ATPAPQA 163 (336)
T ss_dssp CSCHHHH
T ss_pred cCCHHHH
Confidence 9996543
No 211
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.21 E-value=2.1e-06 Score=85.46 Aligned_cols=99 Identities=17% Similarity=0.330 Sum_probs=73.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCe--eEEEcccCccC---CCCCHHHH---------HHHHHHHHhcCcEEEcCceEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSE--VTVVEFAADIV---PSMDGEIR---------KQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~--Vtlv~~~~~~~---~~~d~~~~---------~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
++++|||+|+.|+.+|..|++.|.+ |+++++.+.+. +.+.+... ....+.+++.|++++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999977 99998876531 11221111 1123456678999999999999
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
++..... +++. +++++.+|.+|+|+|.+|....
T Consensus 83 id~~~~~--v~~~-----~g~~~~~d~lvlAtG~~p~~~~ 115 (410)
T 3ef6_A 83 LDVQTRT--ISLD-----DGTTLSADAIVIATGSRARTMA 115 (410)
T ss_dssp EETTTTE--EEET-----TSCEEECSEEEECCCEEECCCC
T ss_pred EECCCCE--EEEC-----CCCEEECCEEEEccCCcccCCC
Confidence 9765543 4443 4568999999999999887643
No 212
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.21 E-value=2.7e-06 Score=84.56 Aligned_cols=35 Identities=34% Similarity=0.430 Sum_probs=32.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGAL 78 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 78 (507)
++|+||||||+|+++|..|++.|++|+|+||.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 58999999999999999999999999999997644
No 213
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.20 E-value=7.9e-07 Score=89.01 Aligned_cols=57 Identities=14% Similarity=0.200 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+.+.+.+.+++.|++++++++|++|+.+++++. +++ +++++.+|.||+|+|....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~------~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA------DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE------TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE------CCEEEECCEEEECCCHHHH
Confidence 56778888899999999999999999988877765 544 3568999999999986543
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=3.2e-06 Score=85.43 Aligned_cols=98 Identities=22% Similarity=0.304 Sum_probs=69.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+... . .
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------~-------~-------------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------Y-------D-------------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------S-------C--------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------c-------C--------------------------
Confidence 468999999999999999999999999999996543210 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..++...+.+...+|+..++.+|.||+|+|.+|.
T Consensus 212 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 212 ----------SELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEEC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcC
Confidence 011122234566678999887 455565444555533454467999999999999885
No 215
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.19 E-value=8.4e-07 Score=88.96 Aligned_cols=98 Identities=18% Similarity=0.225 Sum_probs=72.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh--cCCeeEEEcccCccCC-C----------CCHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWAR--LGSEVTVVEFAADIVP-S----------MDGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~~-~----------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.- . ...++...+.+.+++.|++++. ..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~-~~v~~ 80 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFIN-EKAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEEC-SCEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEE-EEEEE
Confidence 3689999999999999999999 7899999999876521 0 0112222234566678999986 58888
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
++.++. .+++. +++++.+|.+|+|+|.+|+..
T Consensus 81 id~~~~--~v~~~-----~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 81 IDPDAN--TVTTQ-----SGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETTTT--EEEET-----TCCEEECSEEEECCCCEEECC
T ss_pred EECCCC--EEEEC-----CCcEEECCEEEEcCCcccccC
Confidence 876554 34443 456799999999999998765
No 216
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.18 E-value=7e-07 Score=89.49 Aligned_cols=96 Identities=22% Similarity=0.308 Sum_probs=70.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCccC--CC--------CC-HHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIV--PS--------MD-GEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--~~--------~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.|+|+|||+|+.|+.+|..|++.+ .+||++++++... |. ++ +++...+.+.+++.||+++.+ ++++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 378999999999999999999876 6899999887531 11 11 111112345567789999865 7899
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
|+.+++.+ +++ +++++++|.+|+|+|.++.
T Consensus 81 Id~~~~~V--~~~-----~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 81 IDPDANTV--TTQ-----SGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EETTTTEE--EET-----TCCEEECSEEEECCCCEEE
T ss_pred EECCCCEE--EEC-----CCCEEECCEEEEeCCCCcc
Confidence 97666544 443 5678999999999998764
No 217
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.17 E-value=3.1e-06 Score=84.74 Aligned_cols=100 Identities=18% Similarity=0.316 Sum_probs=73.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCccC---CCCC----------HHHHHHHHHHHHhcCcEEEcCceE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIV---PSMD----------GEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~---~~~d----------~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+. +.+. .++.....+.+++.|++++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999997 799999765421 0000 111111235567889999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.++.++. .+++. +++++.+|.+|+|+|.+|....
T Consensus 84 ~~i~~~~~--~v~~~-----~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINRDRQ--QVILS-----DGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEETTTT--EEEET-----TSCEEECSEEEECCCEEECCCG
T ss_pred EEEECCCC--EEEEC-----CCCEEECCEEEEcCCCCccCCC
Confidence 99976554 34443 4568999999999999987653
No 218
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.17 E-value=1.9e-05 Score=79.54 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=79.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC----C--------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----S-------------------------------------- 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----~-------------------------------------- 252 (507)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 3699999999999999999999999999998654200 0
Q ss_pred ----------CC-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 253 ----------MD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 253 ----------~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
++ ..+.+.+.+.+++.|++++.+++|+++..+++.+. +++.+..+|+..++.+|.||.|+|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 00 23556667777778999999999999988777765 66643213334589999999999987754
No 219
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.16 E-value=1.3e-06 Score=87.61 Aligned_cols=47 Identities=17% Similarity=0.326 Sum_probs=42.2
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV 85 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 85 (507)
+|...+||+|||+|.+|+++|..|++.|++|+++|+++.+||.|...
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~ 62 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASL 62 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcccc
Confidence 45567999999999999999999999999999999999999987643
No 220
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.16 E-value=1e-05 Score=81.76 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=70.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+|+.+.+... .+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~~-- 209 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-------------------------------------GD-- 209 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------------------------------------SC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-------------------------------------cC--
Confidence 368999999999999999999999999999996543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEcc-C--CceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTI-E--GGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~-~--g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..++ .+.+.+.+. + |+..++.+|.||+|+|.+|.
T Consensus 210 ----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 210 ----------PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 0112223456677899998873 44443 344556654 5 64458999999999998875
No 221
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.16 E-value=8.7e-07 Score=91.11 Aligned_cols=42 Identities=31% Similarity=0.473 Sum_probs=39.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~GG~~~~ 84 (507)
.+||+|||||++||+||..|++.| ++|+|+|+++++||.+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 479999999999999999999999 999999999999998643
No 222
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.16 E-value=4.7e-06 Score=86.66 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=75.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC-CC----------C-C-H-HHHHHHHHHHHhcCcEEEcCceE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV-PS----------M-D-G-EIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~-~~----------~-d-~-~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. .. . + . .+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999998 78999999887641 10 0 0 0 11112233334579999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
++++.+++.+.+. +..+++..++.+|.+|+|||.+|....
T Consensus 82 ~~id~~~~~v~~~--~~~~g~~~~~~~d~lviAtG~~p~~p~ 121 (565)
T 3ntd_A 82 VAIDRAAKLVTVR--RLLDGSEYQESYDTLLLSPGAAPIVPP 121 (565)
T ss_dssp EEEETTTTEEEEE--ETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCEEEEE--ecCCCCeEEEECCEEEECCCCCCCCCC
Confidence 9998777665554 323345568999999999999887653
No 223
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.16 E-value=9.1e-06 Score=78.41 Aligned_cols=100 Identities=18% Similarity=0.202 Sum_probs=76.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc---c--------CCCC-----CHHHHHHHHHHHHhcCcEEEcCce
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD---I--------VPSM-----DGEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------~~~~-----d~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
..+++|||+|+.|+.+|..|++.|.+|+++++... + .+.+ .+++...+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 46899999999999999999999999999985311 0 1112 24667777788888999999887
Q ss_pred EEEEEEcCCeEEE-EEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 278 VVGVDLSGDGVKL-TLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 278 v~~i~~~~~~v~v-~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
++.++. ++.+.+ .+. +++++.+|.+|+|+|..|....
T Consensus 93 v~~i~~-~~~~~v~~~~-----~g~~~~~d~lviAtG~~~~~~~ 130 (335)
T 2a87_A 93 VESVSL-HGPLKSVVTA-----DGQTHRARAVILAMGAAARYLQ 130 (335)
T ss_dssp EEEEEC-SSSSEEEEET-----TSCEEEEEEEEECCCEEECCCC
T ss_pred EEEEEe-CCcEEEEEeC-----CCCEEEeCEEEECCCCCccCCC
Confidence 888865 444455 443 4568999999999999886543
No 224
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.15 E-value=7.2e-06 Score=83.19 Aligned_cols=105 Identities=21% Similarity=0.320 Sum_probs=68.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCcc------CCC-C------CHHH-------HHHHHHHHHhcCcE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADI------VPS-M------DGEI-------RKQFQRSLEKQKMK 271 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~------~~~-~------d~~~-------~~~~~~~l~~~Gv~ 271 (507)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+ ++. + ..++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 8999999998763 111 1 0111 11222222357999
Q ss_pred EEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 272 FMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 272 i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
++.++++++++.+++.+.+. +..+++...+.+|.+|+|+|.+|....
T Consensus 83 ~~~~~~V~~id~~~~~v~~~--~~~~g~~~~~~~d~lviAtG~~p~~p~ 129 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIE--NLRTGERRTLKYDKLVLALGSKANRPP 129 (472)
T ss_dssp EECSEEEEEEETTTTEEEEE--ETTTCCEEEEECSEEEECCCEEECCCS
T ss_pred EEECCEEEEEECCCCEEEEe--ecCCCCEEEEECCEEEEeCCCCcCCCC
Confidence 99999999998777666554 222334458999999999999887643
No 225
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.15 E-value=4.4e-06 Score=85.73 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHH---CCCcEEEEecCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQ---LGLKTTCIEKRG 76 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~---~g~~V~lie~~~ 76 (507)
.+||+|||||++|+++|..|++ .|.+|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 3699999999999999999999 999999999964
No 226
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.15 E-value=1.5e-05 Score=80.27 Aligned_cols=97 Identities=19% Similarity=0.273 Sum_probs=75.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-----------------------C--------------C----
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----------------------S--------------M---- 253 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----------------------~--------------~---- 253 (507)
..|+|||+|..|+-+|..+++.|.+|+++++.+.+.. . +
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 4699999999999999999999999999998653210 0 0
Q ss_pred --------------------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCe-EEEEEeecCCCceEEEEcC
Q 010573 254 --------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEAD 306 (507)
Q Consensus 254 --------------------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~-v~v~~~~~~~g~~~~i~~D 306 (507)
...+.+.+.+.+++.||+++++++|+++..++++ +.+++. +++++.+|
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~-----~G~~i~Ad 181 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ-----TGEVLETN 181 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-----TCCEEECS
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC-----CCCEEECC
Confidence 0234455667777889999999999999876666 456653 34479999
Q ss_pred EEEEeecCCC
Q 010573 307 VVLVSAGRTP 316 (507)
Q Consensus 307 ~vi~a~G~~p 316 (507)
.||+|+|..+
T Consensus 182 ~VVlAtGg~s 191 (447)
T 2i0z_A 182 HVVIAVGGKS 191 (447)
T ss_dssp CEEECCCCSS
T ss_pred EEEECCCCCc
Confidence 9999999877
No 227
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.14 E-value=1.2e-06 Score=89.01 Aligned_cols=46 Identities=26% Similarity=0.414 Sum_probs=38.7
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 39 SASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 39 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
+....+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t 57 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGT 57 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeee
Confidence 3445689999999999999999999999999999999999997653
No 228
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.14 E-value=6.5e-06 Score=85.98 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=78.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC-----------CCC-C--HHHHHHHHHHHHhcCcEEEcCce
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV-----------PSM-D--GEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~-----------~~~-d--~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. ..+ + ..+...+....++.|+++++++.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 57899999999999999999998 88999999987631 111 1 11223345556678999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 278 v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
|+++..+++.+.+.. ..+++...+.+|.+|+|+|.+|...
T Consensus 116 V~~id~~~~~v~v~~--~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 116 VVKINKEEKTITIKN--VTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEETTTTEEEEEE--TTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEECCCCEEEEee--cCCCCEEEEeCCEEEECCCCCCCCC
Confidence 999987777665542 2233445799999999999988764
No 229
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.14 E-value=1.4e-06 Score=85.34 Aligned_cols=42 Identities=33% Similarity=0.488 Sum_probs=39.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
++|++|||||++|+++|..|++.|++|+|+|+++.+||.|..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 379999999999999999999999999999999999998764
No 230
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.13 E-value=1.9e-06 Score=87.92 Aligned_cols=43 Identities=37% Similarity=0.663 Sum_probs=39.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
...+||+|||||++|++||+.|++.|++|+|+|+++.+||.+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~ 51 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVW 51 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCcee
Confidence 3468999999999999999999999999999999999999753
No 231
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.13 E-value=7.8e-06 Score=82.38 Aligned_cols=100 Identities=24% Similarity=0.324 Sum_probs=69.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC------CCC------CHHHHHHHHHHH-HhcCcEEEcCceE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV------PSM------DGEIRKQFQRSL-EKQKMKFMLKTKV 278 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~------~~~------d~~~~~~~~~~l-~~~Gv~i~~~~~v 278 (507)
.++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. +.+ ..++.....+.+ ++.|+++++++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 36899999999999999999998 78999999887541 111 011122222333 5789999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCce-EEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEK-TILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~-~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.++ .+...+... ++ .++.+|.+|+|+|.+|....
T Consensus 83 ~~i~--~~~~~v~~~-----~g~~~~~~d~lviAtG~~p~~p~ 118 (449)
T 3kd9_A 83 IEVD--TGYVRVREN-----GGEKSYEWDYLVFANGASPQVPA 118 (449)
T ss_dssp EEEC--SSEEEEECS-----SSEEEEECSEEEECCCEEECCCS
T ss_pred EEEe--cCCCEEEEC-----CceEEEEcCEEEECCCCCCCCCC
Confidence 9984 334445432 33 58999999999999887543
No 232
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.13 E-value=6.8e-06 Score=84.64 Aligned_cols=100 Identities=19% Similarity=0.327 Sum_probs=76.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--------C-----------------------------CCCHHH
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------P-----------------------------SMDGEI 257 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------~-----------------------------~~d~~~ 257 (507)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. | ...+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 479999999999999999999999999999875421 0 012567
Q ss_pred HHHHHHHHHhcCc--EEEcCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeec--CCCCCC
Q 010573 258 RKQFQRSLEKQKM--KFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAG--RTPFTA 319 (507)
Q Consensus 258 ~~~~~~~l~~~Gv--~i~~~~~v~~i~~~~~--~v~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~~ 319 (507)
...+.+..++.|+ .++++++|++++.+++ .+.|++. +++++.+|.||+|+| .+|...
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~-----~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLD-----NEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEET-----TTEEEEEEEEEECCCSCBC---C
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC-----CCCEEEeCEEEECcCCCCCCcCC
Confidence 7777777888887 7889999999976543 5566664 567899999999999 666654
No 233
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.13 E-value=1.7e-05 Score=78.04 Aligned_cols=97 Identities=12% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+.... .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-----~~--------------------------------- 186 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL-----LH--------------------------------- 186 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----SC---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc-----cC---------------------------------
Confidence 4689999999999999999999999999999965432100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+++++.+. +..+ +...+.+.+.+| .++.+|.||+|+|.+|.
T Consensus 187 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 187 ----------PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDG--EVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp ----------HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCC--CEEECCEEEECcCCCcC
Confidence 0112223455677899998874 4444 344567777777 67999999999998875
No 234
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.12 E-value=1.1e-05 Score=82.91 Aligned_cols=101 Identities=11% Similarity=0.197 Sum_probs=78.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC--ccC-----------C-CCCHHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA--DIV-----------P-SMDGEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~--~~~-----------~-~~d~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
..+|+|||+|+.|+.+|..+++.|.+|+++++.. .+. + ...+++...+.+.+++.|++++.+++++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4679999999999999999999999999997531 111 0 1134677778888889999999999999
Q ss_pred EEEEc---CCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 280 GVDLS---GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 280 ~i~~~---~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.+..+ ++...+++. ++.++.+|.||+|+|.+|...
T Consensus 292 ~i~~~~~~~~~~~V~~~-----~g~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETA-----SGAVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp EEECCSSTTSCEEEEET-----TSCEEEEEEEEECCCEEECCC
T ss_pred EEEeccCCCceEEEEEC-----CCCEEEcCEEEECCCCCcCCC
Confidence 99653 225666654 456899999999999887653
No 235
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.12 E-value=1.3e-06 Score=88.31 Aligned_cols=42 Identities=36% Similarity=0.666 Sum_probs=39.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 479999999999999999999999999999999999998753
No 236
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.11 E-value=3.7e-06 Score=83.54 Aligned_cols=99 Identities=14% Similarity=0.298 Sum_probs=73.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCcc-C--CCC----------CHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADI-V--PSM----------DGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~-~--~~~----------d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
+++++|||+|+.|+.+|..|++.|. +|+++++.+.. . +.+ ..++.....+.+.+.+++++. +++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v 79 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRM 79 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEE
Confidence 3689999999999999999999998 89999987632 1 001 111112234566788999998 999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.++.+... +++. +++++.+|.+++|+|.+|....
T Consensus 80 ~~id~~~~~--v~~~-----~g~~~~~d~lvlAtG~~p~~~~ 114 (404)
T 3fg2_P 80 VSIDREGRK--LLLA-----SGTAIEYGHLVLATGARNRMLD 114 (404)
T ss_dssp EEEETTTTE--EEES-----SSCEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCE--EEEC-----CCCEEECCEEEEeeCCCccCCC
Confidence 999765554 4443 4568999999999999887543
No 237
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.11 E-value=5.6e-06 Score=83.01 Aligned_cols=103 Identities=19% Similarity=0.270 Sum_probs=74.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCccC--C-CC---------CHH--HHHHHHHHHHhcCcEEEcCceEE
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIV--P-SM---------DGE--IRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--~-~~---------d~~--~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
+|+|||+|+.|+.+|..+++.| .+|+++++.+... + .+ +.. +....++.+++.|++++.+++++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 5999999999999999999988 4689998876431 0 00 000 00112344567899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.+......+.+. ...++++.++.+|.+|+|||.+|+...
T Consensus 82 ~id~~~~~~~~~--~~~~~~~~~~~yd~lVIATGs~p~~p~ 120 (437)
T 4eqs_A 82 AINDERQTVSVL--NRKTNEQFEESYDKLILSPGASANSLG 120 (437)
T ss_dssp EEETTTTEEEEE--ETTTTEEEEEECSEEEECCCEEECCCC
T ss_pred EEEccCcEEEEE--eccCCceEEEEcCEEEECCCCcccccc
Confidence 997666555544 334556778999999999999997654
No 238
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.11 E-value=1.5e-05 Score=75.80 Aligned_cols=99 Identities=19% Similarity=0.234 Sum_probs=68.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc---C---C------CC-CHHHHHHHHHHHHhcC-cEEEcCceEEEE
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI---V---P------SM-DGEIRKQFQRSLEKQK-MKFMLKTKVVGV 281 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---~---~------~~-d~~~~~~~~~~l~~~G-v~i~~~~~v~~i 281 (507)
.|+|||+|+.|+.+|..+++.|.+|+++++...- . + .. .+++.+...+.+.+.+ +.++ ...+..+
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 86 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYY-EKTVVMI 86 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEE-ECCEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEE-eeEEEEe
Confidence 5899999999999999999999999999875321 0 1 11 2455555555555554 5554 4445555
Q ss_pred EE-cCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 282 DL-SGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 282 ~~-~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.. +.+...+.+. +++++.+|.||+|||.+|....
T Consensus 87 ~~~~~~~~~v~~~-----~g~~~~a~~liiATGs~p~~p~ 121 (304)
T 4fk1_A 87 TKQSTGLFEIVTK-----DHTKYLAERVLLATGMQEEFPS 121 (304)
T ss_dssp EECTTSCEEEEET-----TCCEEEEEEEEECCCCEEECCS
T ss_pred eecCCCcEEEEEC-----CCCEEEeCEEEEccCCcccccc
Confidence 44 3444556554 5678999999999999887654
No 239
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.11 E-value=4.2e-05 Score=78.35 Aligned_cols=103 Identities=20% Similarity=0.284 Sum_probs=78.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--------C----------C------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------P----------S------------------------ 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------~----------~------------------------ 252 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++.+... + .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999999999999875110 0 0
Q ss_pred --------------------CC-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEE
Q 010573 253 --------------------MD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLV 310 (507)
Q Consensus 253 --------------------~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~ 310 (507)
++ ..+.+.+.+.+++.|++++.+++|+++..+++.+. +.+.. .+|+..++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~-~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRN-TEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEEC-SSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEe-CCCCEEEEEcCEEEE
Confidence 00 23445566777778999999999999988877654 55442 233335899999999
Q ss_pred eecCCCCC
Q 010573 311 SAGRTPFT 318 (507)
Q Consensus 311 a~G~~p~~ 318 (507)
|+|.....
T Consensus 167 AdG~~S~v 174 (512)
T 3e1t_A 167 ASGNRTRV 174 (512)
T ss_dssp CCCTTCSS
T ss_pred CCCcchHH
Confidence 99987643
No 240
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.10 E-value=2.5e-06 Score=84.65 Aligned_cols=99 Identities=20% Similarity=0.203 Sum_probs=70.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCccC-CCCCHHHH---------HHHHHHHHhcCcEEEcCceEEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIV-PSMDGEIR---------KQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~-~~~d~~~~---------~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
+|+|+|||+|+.|+.+|..|++.+ .+|+++++.+... ......+. ..-.+.+.+.||+++. .+++.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~-~~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVH-DSALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEEC-SCEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEE-eEEEEE
Confidence 689999999999999999998876 5899999877532 11111110 0112345568999985 478888
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.+.+.+. +. ++.++.+|.+++|+|.+|+...
T Consensus 81 d~~~~~v~--~~-----~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DPDKKLVK--TA-----GGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ETTTTEEE--ET-----TSCEEECSEEEECCCEEECGGG
T ss_pred EccCcEEE--ec-----ccceeecceeeeccCCccccCC
Confidence 76555433 32 5678999999999999887643
No 241
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.10 E-value=1.7e-05 Score=78.76 Aligned_cols=98 Identities=20% Similarity=0.335 Sum_probs=75.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-----C----------------------------------C
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----M----------------------------------D 254 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----~----------------------------------d 254 (507)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.+. + .
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~g 102 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSG 102 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCCC
Confidence 458999999999999999999999999999987643100 0 0
Q ss_pred ------------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEE
Q 010573 255 ------------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLV 310 (507)
Q Consensus 255 ------------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~ 310 (507)
..+.+.+.+.+.+ ++++++++|++++.+++++.+++. +++++.+|.||.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~a~~vV~ 175 (407)
T 3rp8_A 103 ENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFT-----DGSSASGDLLIA 175 (407)
T ss_dssp CEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEET-----TSCEEEESEEEE
T ss_pred CEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEc-----CCCEEeeCEEEE
Confidence 1233444444444 789999999999988888888875 456899999999
Q ss_pred eecCCCCC
Q 010573 311 SAGRTPFT 318 (507)
Q Consensus 311 a~G~~p~~ 318 (507)
|.|.....
T Consensus 176 AdG~~S~v 183 (407)
T 3rp8_A 176 ADGSHSAL 183 (407)
T ss_dssp CCCTTCSS
T ss_pred CCCcChHH
Confidence 99987654
No 242
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.09 E-value=2.7e-06 Score=86.54 Aligned_cols=44 Identities=30% Similarity=0.423 Sum_probs=40.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCCCCceecc
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~~GG~~~~ 84 (507)
...+||+|||||++|++||++|++.| .+|+|+|+++.+||.+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 34689999999999999999999998 799999999999998764
No 243
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.09 E-value=1.7e-06 Score=87.91 Aligned_cols=54 Identities=22% Similarity=0.383 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEcCCe-EEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~-v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.+.+.+.+.+++.|++++++++|++|+.++++ +.|+. ++.++.+|.||+|++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~------~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL------RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC------SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE------CCeEEEcCEEEECCCHH
Confidence 67778888888999999999999999877665 66653 23479999999999753
No 244
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=1.4e-05 Score=80.69 Aligned_cols=98 Identities=23% Similarity=0.318 Sum_probs=68.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+.. . .+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------~----------------------------~~-- 210 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS---------G----------------------------FE-- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------T----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc---------c----------------------------cC--
Confidence 46899999999999999999999999999999654311 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEcc-CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTI-EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~-~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..++ .+.+.+.+. +|+..++.+|.||+|+|.+|.
T Consensus 211 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 211 ----------KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 0112223455677899998874 44443 334555543 333478999999999998875
No 245
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.09 E-value=6.5e-06 Score=83.06 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=76.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC--C---------CC---CH-HHHHHHHHHHHhcCcEEEcCceE
Q 010573 216 KLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--P---------SM---DG-EIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~--~---------~~---d~-~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
+++|||+|+.|+.+|..+++. |.+|+++++.+.+. + .. ++ ++.....+.+++.|++++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 689999999999999999998 99999999887521 0 10 11 11112345667789999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.++.+++.+.+. +..++++.++.+|.+|+|+|.+|....
T Consensus 82 ~~i~~~~~~v~v~--~~~~g~~~~~~~d~lviAtGs~p~~p~ 121 (452)
T 2cdu_A 82 TNVDPETKTIKVK--DLITNEEKTEAYDKLIMTTGSKPTVPP 121 (452)
T ss_dssp EEEEGGGTEEEEE--ETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEEcCCCEEEEE--ecCCCceEEEECCEEEEccCCCcCCCC
Confidence 9997666655544 222334678999999999999887653
No 246
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.09 E-value=2e-05 Score=75.11 Aligned_cols=99 Identities=20% Similarity=0.210 Sum_probs=74.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc----------------CCCC-----CHHHHHHHHHHHHhcCcEEEc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI----------------VPSM-----DGEIRKQFQRSLEKQKMKFML 274 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~----------------~~~~-----d~~~~~~~~~~l~~~Gv~i~~ 274 (507)
.|+|||+|+.|+.+|..+++.|.+|+++++.+.. .+.+ .+++...+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 5999999999999999999999999999875421 0111 146777788888889999875
Q ss_pred CceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 275 KTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 275 ~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
. .+.......+...+... ++.++.+|.+|+|||.+|....
T Consensus 86 ~-~v~~~~~~~~~~~~~~~-----~~~~~~~~~liiATG~~~~~~~ 125 (314)
T 4a5l_A 86 E-TIDHVDFSTQPFKLFTE-----EGKEVLTKSVIIATGATAKRMH 125 (314)
T ss_dssp C-CEEEEECSSSSEEEEET-----TCCEEEEEEEEECCCEEECCCC
T ss_pred e-EEEEeecCCCceEEEEC-----CCeEEEEeEEEEcccccccccC
Confidence 4 45555555555555543 5678999999999999887644
No 247
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.07 E-value=2.4e-06 Score=87.59 Aligned_cols=43 Identities=40% Similarity=0.529 Sum_probs=38.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
...+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 3458999999999999999999999999999999999999764
No 248
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.07 E-value=1.7e-05 Score=80.60 Aligned_cols=98 Identities=17% Similarity=0.267 Sum_probs=69.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+.... +
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------------------------~-- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASM-------------------------------------D-- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSS-------------------------------------C--
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccccc-------------------------------------C--
Confidence 4689999999999999999999999999999965432110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec----CCEEEEEcc---CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS----PSEVSVDTI---EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d----~~~~~v~~~---~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..++ .+.+.+.+. +|+...+.+|.||+|+|.+|.
T Consensus 224 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 224 ----------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcC
Confidence 0112223456677899998874 44443 334555544 333478999999999998875
No 249
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.07 E-value=2.3e-06 Score=87.47 Aligned_cols=56 Identities=13% Similarity=0.163 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhcC-cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 255 GEIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 255 ~~~~~~~~~~l~~~G-v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
..+.+.+.+.+.+.| ++++++++|++|+.+++++.+++. +++++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~-----~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTAR-----DGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEET-----TCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEEC-----CCCEEEcCEEEECCCHH
Confidence 467777888888888 999999999999887777877764 44579999999999954
No 250
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.06 E-value=1.8e-05 Score=78.13 Aligned_cols=101 Identities=19% Similarity=0.278 Sum_probs=76.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-----CC-C-------------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-----VP-S------------------------------------- 252 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-----~~-~------------------------------------- 252 (507)
+|+|||+|+.|+.+|..|++.|.+|+++++.+.. .. .
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 83 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQR 83 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTEE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCce
Confidence 6999999999999999999999999999987631 00 0
Q ss_pred ----------------CC-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcC-CeEEEEEeecCCCceEEEEcCEEEEeecC
Q 010573 253 ----------------MD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 253 ----------------~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
++ .++.+.+.+.+.+.|+++++++++++++.++ +.+.+++.. +|+..++.+|.||.|.|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~--~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 84 RRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFER--DGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEE--TTEEEEEECSEEEECCCT
T ss_pred EEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEec--CCcEEEEEeCEEEECCCC
Confidence 01 2344556666777899999999999998653 456777632 222237999999999998
Q ss_pred CCCC
Q 010573 315 TPFT 318 (507)
Q Consensus 315 ~p~~ 318 (507)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 8765
No 251
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.06 E-value=3.1e-06 Score=83.33 Aligned_cols=42 Identities=24% Similarity=0.525 Sum_probs=39.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
++|++|||||++|+++|..|++.|++|+|+|+++.+||.|..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 379999999999999999999999999999999999998743
No 252
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.06 E-value=1.4e-06 Score=88.26 Aligned_cols=42 Identities=33% Similarity=0.461 Sum_probs=38.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC------CcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG------LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g------~~V~lie~~~~~GG~~~~ 84 (507)
++||+|||||++|++||++|++.| ++|+|+|+++.+||.+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s 52 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQT 52 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEE
Confidence 479999999999999999999999 999999999999987543
No 253
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.06 E-value=3.3e-06 Score=84.57 Aligned_cols=47 Identities=19% Similarity=0.219 Sum_probs=37.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCC---CCCceeccccccch
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG---ALGGTCLNVGCIPS 90 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~---~~GG~~~~~~~~p~ 90 (507)
+||+||||||+|+++|+.|++.|++|+|||+.. ..+|.+....|.+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~ 72 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNA 72 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccc
Confidence 799999999999999999999999999999965 22344444455443
No 254
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.06 E-value=4.7e-06 Score=83.09 Aligned_cols=100 Identities=20% Similarity=0.264 Sum_probs=74.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCe--eEEEcccCccC------C--CC-----CHHHHHHHHHHHHhcCcEEEcCceE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSE--VTVVEFAADIV------P--SM-----DGEIRKQFQRSLEKQKMKFMLKTKV 278 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~--Vtlv~~~~~~~------~--~~-----d~~~~~~~~~~l~~~Gv~i~~~~~v 278 (507)
..+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+. . .+ ..++.....+.+++.|++++.++++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 36899999999999999999999987 99998876421 0 00 1122222356667889999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.+...... +.+. +++.+.+|.+|+|+|.+|....
T Consensus 89 ~~id~~~~~--v~~~-----~g~~~~~d~lvlAtG~~~~~~~ 123 (415)
T 3lxd_A 89 VSLDPAAHT--VKLG-----DGSAIEYGKLIWATGGDPRRLS 123 (415)
T ss_dssp EEEETTTTE--EEET-----TSCEEEEEEEEECCCEECCCCB
T ss_pred EEEECCCCE--EEEC-----CCCEEEeeEEEEccCCccCCCC
Confidence 999765543 4443 4568999999999999887643
No 255
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.05 E-value=3.4e-06 Score=84.50 Aligned_cols=58 Identities=17% Similarity=0.199 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
..+.+.+.+.+++.|++++++++|++|..+++++..... +++++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-----~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-----EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-----TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-----CCeEEECCEEEECCCCCcc
Confidence 477888888888999999999999999887777663332 4578999999999998874
No 256
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.05 E-value=1.1e-05 Score=81.25 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=69.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+... ++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~~-- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-------------------------------------FD-- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-------------------------------------hh--
Confidence 468999999999999999999999999999986443110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecC---CEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~---~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+++++.+. +..+.. ..+.+.+.+| ..+.+|.||+|+|.+|..
T Consensus 208 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g--~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 208 ----------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDG--RSETVDCLIWAIGREPAN 267 (450)
T ss_dssp ----------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEESC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCC--cEEEcCEEEECCCCCcCC
Confidence 0011223445666789988873 444432 2366777777 579999999999998853
No 257
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.04 E-value=1.5e-05 Score=80.66 Aligned_cols=103 Identities=17% Similarity=0.215 Sum_probs=75.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC-----CeeEEEcccCccC-------C--C-----------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG-----SEVTVVEFAADIV-------P--S----------------------------- 252 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g-----~~Vtlv~~~~~~~-------~--~----------------------------- 252 (507)
+|+|||+|+.|+.+|..|++.| .+|+++++.+.+. + .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 6999999999999999999999 8999999877421 0 0
Q ss_pred -------------CCHHHHHHHHHHHHhcCcEEEcCceEEEEEEc---CCe--EEEEEeecCCCceEEEEcCEEEEeecC
Q 010573 253 -------------MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS---GDG--VKLTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 253 -------------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~---~~~--v~v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
...++.+.+....++.+++++++++|++++.+ ++. +.+++.+.. +...++.+|.||+|+|.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~-g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNAD-GEELVRTTRALVVSPGG 190 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETT-SCEEEEEESEEEECCCC
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCC-CceEEEEeCEEEECCCC
Confidence 01234444555556668999999999999765 332 355554321 23348999999999999
Q ss_pred CCCCC
Q 010573 315 TPFTA 319 (507)
Q Consensus 315 ~p~~~ 319 (507)
.|..+
T Consensus 191 ~p~~p 195 (463)
T 3s5w_A 191 TPRIP 195 (463)
T ss_dssp EECCC
T ss_pred CCCCc
Confidence 88754
No 258
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.03 E-value=3e-06 Score=86.67 Aligned_cols=47 Identities=30% Similarity=0.439 Sum_probs=41.4
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
++++...+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 27 ~~~~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 27 LKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 33445568999999999999999999999999999999999999764
No 259
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.03 E-value=2.1e-05 Score=74.92 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=71.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc---c--------CCCC----CHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD---I--------VPSM----DGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------~~~~----d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.|+|||+|+.|+.+|..+++.|.+|+++++... . .|.+ .+++.........+.+..+..+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999987531 0 1111 246666677777788888887766655
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
..... ...+. . +++++.+|.+|+|||.+|....
T Consensus 88 ~~~~~-~~~~~-~-----~~~~~~~d~liiAtGs~~~~~~ 120 (312)
T 4gcm_A 88 EDKGE-YKVIN-F-----GNKELTAKAVIIATGAEYKKIG 120 (312)
T ss_dssp EECSS-CEEEE-C-----SSCEEEEEEEEECCCEEECCCC
T ss_pred eeeec-ceeec-c-----CCeEEEeceeEEcccCccCcCC
Confidence 54322 22222 1 4578999999999999887643
No 260
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.01 E-value=6e-05 Score=78.26 Aligned_cols=102 Identities=30% Similarity=0.369 Sum_probs=78.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC------------------------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------------------ 251 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 251 (507)
..+|+|||||+.|+-+|..|++.|.+|+++++.+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 46899999999999999999999999999998731100
Q ss_pred ---------------------CCC-HHHHHHHHHHHHhcCcEEEcCceEEEEEEc-CCeEEEEEeecCCCceEEEEcCEE
Q 010573 252 ---------------------SMD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVV 308 (507)
Q Consensus 252 ---------------------~~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~v~~~~~~~g~~~~i~~D~v 308 (507)
.++ ..+...+.+.+++.|++++.+++|++++.+ ++.+.+++.+ +|...++.+|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~--~G~~~~i~AdlV 180 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR--GGESVTVESDFV 180 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE--TTEEEEEEESEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec--CCceEEEEcCEE
Confidence 011 245566777778899999999999999865 4566677653 233368999999
Q ss_pred EEeecCCCC
Q 010573 309 LVSAGRTPF 317 (507)
Q Consensus 309 i~a~G~~p~ 317 (507)
|.|+|....
T Consensus 181 V~AdG~~S~ 189 (591)
T 3i3l_A 181 IDAGGSGGP 189 (591)
T ss_dssp EECCGGGCH
T ss_pred EECCCCcch
Confidence 999998663
No 261
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.01 E-value=1.5e-05 Score=80.26 Aligned_cols=104 Identities=20% Similarity=0.316 Sum_probs=75.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC--C---------CC-C-HHHHHHHHHHHHhcCcEEEcCceEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--P---------SM-D-GEIRKQFQRSLEKQKMKFMLKTKVV 279 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~--~---------~~-d-~~~~~~~~~~l~~~Gv~i~~~~~v~ 279 (507)
++++|||+|+.|+.+|..+++. |.+|+++++.+.+. + .. + .++.....+.+++.|++++.++.++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 3699999999999999999998 89999999877531 1 00 1 1122223456677899999999999
Q ss_pred EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 280 GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 280 ~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
.+..+++.+.+. +..+|+..++.+|.+|+|+|.+|....
T Consensus 81 ~i~~~~~~v~~~--~~~~g~~~~~~~d~lviAtG~~p~~p~ 119 (447)
T 1nhp_A 81 AIQPKEHQVTVK--DLVSGEERVENYDKLIISPGAVPFELD 119 (447)
T ss_dssp EEETTTTEEEEE--ETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEeCCCCEEEEE--ecCCCceEEEeCCEEEEcCCCCcCCCC
Confidence 997666655544 212233346999999999999987653
No 262
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.01 E-value=1.9e-05 Score=79.85 Aligned_cols=98 Identities=23% Similarity=0.312 Sum_probs=68.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~~----------------------------~~-- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL---------PN----------------------------ED-- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------TT----------------------------SC--
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc---------cc----------------------------cC--
Confidence 4689999999999999999999999999999865431 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEcc-CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTI-EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~-~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..+. ...+.+.+. +|+..++.+|.||+|+|.+|.
T Consensus 212 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 212 ----------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 011122345566778999887 444443 233555554 555578999999999999885
No 263
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.01 E-value=4e-05 Score=78.98 Aligned_cols=100 Identities=23% Similarity=0.312 Sum_probs=79.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--------------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------------------------------------------- 250 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 250 (507)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999875320
Q ss_pred -------------------------C----CCC-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCC----eEEEEEeecC
Q 010573 251 -------------------------P----SMD-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD----GVKLTLEPAA 296 (507)
Q Consensus 251 -------------------------~----~~d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~----~v~v~~~~~~ 296 (507)
+ .++ ..+...+.+.+++.|+++++++++++++.+++ ++.+++.+..
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 0 001 24556677777788999999999999998888 8888876421
Q ss_pred CCceEEEEcCEEEEeecCCC
Q 010573 297 GGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 297 ~g~~~~i~~D~vi~a~G~~p 316 (507)
...++.+|.||.|.|...
T Consensus 166 --~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 --GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp --EEEEEEEEEEEECCCTTC
T ss_pred --CeEEEEeCEEEECCCCcc
Confidence 136899999999999764
No 264
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.00 E-value=2.7e-05 Score=78.73 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=69.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+... ++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-------------------------------------~~-- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-------------------------------------FD-- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------------------------------------SC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-------------------------------------cC--
Confidence 358999999999999999999999999999985432100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+|+++.+. +..++ .+.+.+.+.+|+. ++.+|.||+|+|.+|..
T Consensus 207 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~-~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 207 ----------PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTR-LEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCE-EEEESEEEECSCEEESC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcE-EEEcCEEEECCCCCcCC
Confidence 0011223455677899998874 44443 3456777777732 79999999999998853
No 265
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.00 E-value=3.2e-06 Score=85.91 Aligned_cols=42 Identities=33% Similarity=0.476 Sum_probs=38.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG--LKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~ 84 (507)
++||+|||||++|+++|++|++.| ++|+|+|+++.+||.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 479999999999999999999999 999999999999987654
No 266
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.00 E-value=5e-05 Score=75.42 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=76.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCe-eEEEcccCccCCC-----CC----------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSE-VTVVEFAADIVPS-----MD---------------------------------- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~~~~-----~d---------------------------------- 254 (507)
.+|+|||+|+.|+-+|..|++.|.+ |+++++.+.+.+. +.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g~ 84 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGA 84 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCCC
Confidence 4799999999999999999999999 9999987643110 00
Q ss_pred ----------------------HHHHHHHHHHHHh-cC-cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEE
Q 010573 255 ----------------------GEIRKQFQRSLEK-QK-MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLV 310 (507)
Q Consensus 255 ----------------------~~~~~~~~~~l~~-~G-v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~ 310 (507)
..+.+.+.+.+++ .| ++++++++|++++. ++++.+++.+..+|+..++.+|.||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~ 163 (410)
T 3c96_A 85 TVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVG 163 (410)
T ss_dssp EEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEE
T ss_pred EEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEE
Confidence 1334455566655 35 68999999999987 66777877642223336899999999
Q ss_pred eecCCCCC
Q 010573 311 SAGRTPFT 318 (507)
Q Consensus 311 a~G~~p~~ 318 (507)
|.|.....
T Consensus 164 AdG~~S~v 171 (410)
T 3c96_A 164 ADGIHSAV 171 (410)
T ss_dssp CCCTTCHH
T ss_pred CCCccchh
Confidence 99987654
No 267
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.00 E-value=6.7e-05 Score=76.39 Aligned_cols=97 Identities=19% Similarity=0.217 Sum_probs=67.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+.... .
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------------d-------------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQ-------------D-------------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCC-------------C--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccC-------------C--------------------------
Confidence 4689999999999999999999999999999965432100 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEcc--CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTI--EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~--~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++. |+++.+. +..+ +.+.+.+.+. +|+..++.+|.||+|+|.+|.
T Consensus 215 ----------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 215 ----------EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ----------HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred ----------HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 01112223445555 8887663 4333 3344556554 565578999999999999885
No 268
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.00 E-value=9.5e-06 Score=80.62 Aligned_cols=99 Identities=17% Similarity=0.279 Sum_probs=71.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCccC---CCCCHHHHHH-H-H----HHHHhcCcEEEcCceEEEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADIV---PSMDGEIRKQ-F-Q----RSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~---~~~d~~~~~~-~-~----~~l~~~Gv~i~~~~~v~~i~ 282 (507)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+. +.+.+.+... . . +.+++.|++++.+++++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 4679999999999999999999997 499999877531 1122222110 0 0 03456799999999999997
Q ss_pred EcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 283 LSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
.++.. +++. +++++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~--v~~~-----~g~~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 87 PQAHT--VALS-----DGRTLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp TTTTE--EEET-----TSCEEECSEEEECCCEEECCC
T ss_pred CCCCE--EEEC-----CCCEEECCEEEECCCCCCCCC
Confidence 55443 4443 456899999999999988764
No 269
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=2.5e-05 Score=79.71 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=69.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... ++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~d-- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-------------------------------------FD-- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-------------------------------------SC--
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-------------------------------------cc--
Confidence 468999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecC---CEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~---~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.+|+++.+. +..++. ..+.+.+.+|+. .+.+|.||+|+|.+|..
T Consensus 217 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~-~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 217 ----------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRI-YEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCE-EEEESEEEECCCBCCTT
T ss_pred ----------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcE-EEECCEEEECCCCCcCC
Confidence 0112223456777899998874 444432 236677777732 38999999999998853
No 270
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.99 E-value=5.6e-05 Score=77.04 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=80.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC------------------------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------------------ 251 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 251 (507)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 35799999999999999999999999999997643310
Q ss_pred -----CC-------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 252 -----SM-------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 252 -----~~-------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.. ...+.+.+.+.+++.|+++++++++++++.+++++.+++.+. +| ..++.+|.||.|.|....
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~-~g-~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGP-DG-PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECS-SC-EEEEEEEEEEECCCTTCH
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcC-CC-cEEEEeCEEEEccCcccH
Confidence 00 024556667777778999999999999998888888887642 12 347999999999998753
No 271
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.98 E-value=5.9e-05 Score=76.90 Aligned_cols=101 Identities=19% Similarity=0.271 Sum_probs=79.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC------------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS------------------------------------------ 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 252 (507)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 91 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFG 91 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecccc
Confidence 46999999999999999999999999999976532100
Q ss_pred -CC-----------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 -MD-----------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 -~d-----------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.+ ..+.+.+.+.+++.|+++++++++++++.+++++.+++.+.. | ..++.+|.||.|.|....
T Consensus 92 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~-g-~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 92 VLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPE-G-KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp GSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETT-E-EEEEEESEEEECCCTTCH
T ss_pred cCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCC-C-CEEEEeCEEEECCCcchH
Confidence 00 234556667777789999999999999988888888876421 2 247999999999998753
No 272
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.98 E-value=3.6e-05 Score=78.87 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=69.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..+++.|.+|+|+++...+.+ .|
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~--------------------------------------~D-- 262 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG--------------------------------------FD-- 262 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT--------------------------------------SC--
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc--------------------------------------cc--
Confidence 46899999999999999999999999999987432211 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEE--ecCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKF--ISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~--~d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+...+++.+++++.+. +.. .....+.+.+.++ ..+.+|.|++|+|-+|.
T Consensus 263 ----------~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~--~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 263 ----------QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDK--TSELYDTVLYAIGRKGD 320 (542)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEES
T ss_pred ----------hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCC--CeEEEEEEEEcccccCC
Confidence 1122334566778899998874 322 3456677777776 56789999999999885
No 273
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.98 E-value=6.6e-06 Score=80.39 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
..++||+|||||++|+++|++|++.|++|+|||++.
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 456899999999999999999999999999999965
No 274
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.97 E-value=2.8e-05 Score=80.57 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=79.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC-------------------------------------C-----C
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV-------------------------------------P-----S 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------~-----~ 252 (507)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 469999999999999999999999999999754311 0 0
Q ss_pred ---------------C-CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCce-EEEEcCEEEEeecCC
Q 010573 253 ---------------M-DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEK-TILEADVVLVSAGRT 315 (507)
Q Consensus 253 ---------------~-d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~-~~i~~D~vi~a~G~~ 315 (507)
+ ...+.+.+.+.+++.|++++.+++|++++.+++++.+++... ++ +++.+|.||.|.|..
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~---~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGP---SGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEET---TEEEEEEESEEEECSCSS
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeC---CCcEEEEeCEEEEcCCCC
Confidence 0 134566677777778999999999999988888888887431 44 689999999999987
Q ss_pred CC
Q 010573 316 PF 317 (507)
Q Consensus 316 p~ 317 (507)
..
T Consensus 207 S~ 208 (570)
T 3fmw_A 207 ST 208 (570)
T ss_dssp CH
T ss_pred ch
Confidence 53
No 275
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.97 E-value=5.7e-05 Score=78.44 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=76.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC---------------------------------------CC-
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS---------------------------------------MD- 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---------------------------------------~d- 254 (507)
..|+|||+|..|+.+|..+++.|.+|+++++.+.+... .+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 57999999999999999999999999999987643210 00
Q ss_pred ------------------------------------------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcC-
Q 010573 255 ------------------------------------------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG- 285 (507)
Q Consensus 255 ------------------------------------------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~- 285 (507)
..+...+.+.+++.||+++++++++++..++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 2334456667778899999999999998765
Q ss_pred CeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 286 DGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 286 ~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+.+. +.+.+ .++...++.+|.||+|+|....
T Consensus 287 g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 287 GTVKGILVKG-MYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp SCEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred CeEEEEEEEe-CCCcEEEEECCeEEEeCCCccc
Confidence 5543 55443 1333347999999999997553
No 276
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.97 E-value=3e-05 Score=78.66 Aligned_cols=99 Identities=19% Similarity=0.311 Sum_probs=68.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+... . ++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------~----------------------------~~-- 219 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------G----------------------------ID-- 219 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------S----------------------------CC--
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------c----------------------------cC--
Confidence 368999999999999999999999999999996543110 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--CCE-EEEEcc---CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--PSE-VSVDTI---EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~~~-~~v~~~---~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.||+++.+. +..+. .+. +.+.+. +++..++.+|.||+|+|.+|.
T Consensus 220 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 220 ----------MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 0112223456677899998874 44443 222 555431 222378999999999999875
No 277
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.96 E-value=1.1e-05 Score=82.10 Aligned_cols=103 Identities=18% Similarity=0.239 Sum_probs=76.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC---CeeEEEcccCccC--C---------C-C-CHHHHHHHHHHHHhcCcEEEcCce
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG---SEVTVVEFAADIV--P---------S-M-DGEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g---~~Vtlv~~~~~~~--~---------~-~-d~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
..+++|||+|+.|+.+|..+++.| .+|+++++.+.+. + . . .+++.....+.+++.|++++.++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 368999999999999999999988 9999999876431 1 0 0 111211224566778999999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 278 VVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 278 v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
++.+..+++.+.+.. ++++.++.+|.+|+|+|.+|....
T Consensus 115 v~~i~~~~~~v~v~~----~g~~~~~~~d~lviAtG~~p~~p~ 153 (490)
T 2bc0_A 115 VQSIDYDAKTVTALV----DGKNHVETYDKLIFATGSQPILPP 153 (490)
T ss_dssp EEEEETTTTEEEEEE----TTEEEEEECSEEEECCCEEECCCS
T ss_pred EEEEECCCCEEEEEe----CCcEEEEECCEEEECCCCCcCCCC
Confidence 999976666655532 124568999999999999887653
No 278
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.96 E-value=3.1e-05 Score=78.38 Aligned_cols=98 Identities=23% Similarity=0.311 Sum_probs=67.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... ++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~d-- 214 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-------------------------------------LD-- 214 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------------------------------------SC--
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-------------------------------------CC--
Confidence 468999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCcEEEEe-EEEEec--CCEEEEEcc--CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLF-KKNKVTYVKG-YGKFIS--PSEVSVDTI--EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~d--~~~~~v~~~--~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+ ++.+|+++.+ .+..+. .+.+.+.+. +|+..++.+|.||+|+|.+|.
T Consensus 215 ----------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 215 ----------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp ----------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 01122234556 7789999887 444443 223555554 554467999999999998885
No 279
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=1.9e-05 Score=80.06 Aligned_cols=98 Identities=17% Similarity=0.259 Sum_probs=69.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+... .+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-------------------------------------~~-- 217 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-------------------------------------MD-- 217 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-------------------------------------cc--
Confidence 468999999999999999999999999999996543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCC--EEEEEcc---CCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPS--EVSVDTI---EGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~--~~~v~~~---~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..++.+ .+.+.+. +|+..++.+|.||+|+|.+|.
T Consensus 218 ----------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 218 ----------AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp ----------HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred ----------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 0112223456677899998874 5555432 3555543 444478999999999998875
No 280
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.95 E-value=2.6e-05 Score=77.20 Aligned_cols=101 Identities=24% Similarity=0.337 Sum_probs=72.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-----C--C-C---HHHH------------------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-----S--M-D---GEIR------------------------ 258 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----~--~-d---~~~~------------------------ 258 (507)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . + . .++.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 46899999999999999999999999999998764311 0 0 0 0000
Q ss_pred ----------------------HHHHHHHHh--cCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecC
Q 010573 259 ----------------------KQFQRSLEK--QKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 259 ----------------------~~~~~~l~~--~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
..+.+.|.+ .+++++++++|++++.+++++.+++. +++++.+|.||.|.|.
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-----~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFE-----NKPSETADLVILANGG 180 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEET-----TSCCEEESEEEECSCT
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEEC-----CCcEEecCEEEECCCc
Confidence 011222221 13578889999999888778888775 4457999999999998
Q ss_pred CCCCC
Q 010573 315 TPFTA 319 (507)
Q Consensus 315 ~p~~~ 319 (507)
.....
T Consensus 181 ~S~vR 185 (398)
T 2xdo_A 181 MSKVR 185 (398)
T ss_dssp TCSCC
T ss_pred chhHH
Confidence 87653
No 281
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.94 E-value=2.9e-05 Score=75.13 Aligned_cols=95 Identities=14% Similarity=0.195 Sum_probs=69.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHh---cCCeeEEEcccCccCC--------------------C---CCH---HHH-------
Q 010573 215 KKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAADIVP--------------------S---MDG---EIR------- 258 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~~~--------------------~---~d~---~~~------- 258 (507)
.+|+|||+|..|+-+|..|++ .|.+|+++++.+.+.. . .+. ...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 369999999999999999999 9999999997643210 0 000 111
Q ss_pred -------------------------------HHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCE
Q 010573 259 -------------------------------KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADV 307 (507)
Q Consensus 259 -------------------------------~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~ 307 (507)
..++...++.|++++++++|++++.+++++.+++. +++++.+|.
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~-----~g~~~~ad~ 156 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQ-----TGSPEQFDL 156 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEES-----SSCCEEESE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEEC-----CCCEEEcCE
Confidence 11122233348999999999999988888887764 345689999
Q ss_pred EEEeecC
Q 010573 308 VLVSAGR 314 (507)
Q Consensus 308 vi~a~G~ 314 (507)
||+|+..
T Consensus 157 vV~A~p~ 163 (342)
T 3qj4_A 157 IVLTMPV 163 (342)
T ss_dssp EEECSCH
T ss_pred EEECCCH
Confidence 9999874
No 282
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.94 E-value=3.4e-05 Score=79.19 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=69.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChHH
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA 123 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 123 (507)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+... .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-------------------------------------~~--- 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-------------------------------------KD--- 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-------------------------------------CS---
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-------------------------------------cc---
Confidence 68999999999999999999999999999996532110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--CE----EEEEccCCceE-EEEeCeEEEccCCCCCC
Q 010573 124 MMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--SE----VSVDTIEGGNT-VVKGKNIIIATGSDVKS 190 (507)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~~----~~v~~~~g~~~-~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.||+++.+ .+..+.. +. +.+.+.+| . ++.+|.||+|+|.+|..
T Consensus 255 ---------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G--~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 255 ---------NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG--EMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp ---------HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTE--EEEEECSCEEECCCCEECC
T ss_pred ---------HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCC--cEEEEcCEEEECcCCccCC
Confidence 011222345667789999877 4444432 33 56777676 4 89999999999998853
No 283
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.94 E-value=5e-05 Score=78.57 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=73.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc-cC-----------------------CC------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-IV-----------------------PS------------------ 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~-----------------------~~------------------ 252 (507)
-.|+|||+|..|+++|..+++.|.+|+++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999997631 10 00
Q ss_pred ------------CC-HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeE-EEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 ------------MD-GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGV-KLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 ------------~d-~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.| ..+...+.+.+++ .|++++ +..|+.+..+++.+ .|.+. ++.++.+|.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~-----dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQ-----MGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEET-----TSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEEC-----CCCEEECCEEEEcCCCCcc
Confidence 01 1344556677777 699995 67899998766655 35543 4568999999999998764
Q ss_pred C
Q 010573 318 T 318 (507)
Q Consensus 318 ~ 318 (507)
.
T Consensus 183 ~ 183 (651)
T 3ces_A 183 G 183 (651)
T ss_dssp C
T ss_pred C
Confidence 3
No 284
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.92 E-value=6.3e-05 Score=77.79 Aligned_cols=98 Identities=18% Similarity=0.303 Sum_probs=73.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc-cC-----------------------CC-----------------
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD-IV-----------------------PS----------------- 252 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~-----------------------~~----------------- 252 (507)
.-.|+|||+|..|+++|..+++.|.+|+++++.+. +. ..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 45799999999999999999999999999997641 10 00
Q ss_pred -------------CCH-HHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 253 -------------MDG-EIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 253 -------------~d~-~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.|. .+...+.+.+++ .|++++ +..|+.+..+++.+. |.+. ++.++.+|.||+|+|..+
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~-----~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVR-----SGRAIQAKAAILACGTFL 174 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEET-----TSCEEEEEEEEECCTTCB
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEEC-----CCcEEEeCEEEECcCCCC
Confidence 011 344556667776 499996 458888877777765 6543 446899999999999875
Q ss_pred C
Q 010573 317 F 317 (507)
Q Consensus 317 ~ 317 (507)
+
T Consensus 175 ~ 175 (641)
T 3cp8_A 175 N 175 (641)
T ss_dssp T
T ss_pred C
Confidence 4
No 285
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.92 E-value=9e-05 Score=70.26 Aligned_cols=161 Identities=16% Similarity=0.167 Sum_probs=98.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccCC--C------------------------------------CC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIVP--S------------------------------------MD 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~--~------------------------------------~d 254 (507)
-+|+|||+|+.|+.+|..+++. |.+|+++++.+.... . ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 3799999999999999999998 999999998654420 0 11
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcC----C--eEE-EEEee---cC------CCceEEEEc------------
Q 010573 255 GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSG----D--GVK-LTLEP---AA------GGEKTILEA------------ 305 (507)
Q Consensus 255 ~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~----~--~v~-v~~~~---~~------~g~~~~i~~------------ 305 (507)
.++...+.+.+.+ .|++++.++.++++..++ + .+. +.+.. .. ..+..++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 2344555666666 499999999999997663 2 332 33321 01 114568999
Q ss_pred ---CEEEEeecCCCCCCCCCCcccCceecCCCC------eec-------CCCCCC--CCCCeEEecCCC----CC----C
Q 010573 306 ---DVVLVSAGRTPFTAGLGLDKIGVETDKMGR------IPV-------NERFAT--NIPGVYAIGDVI----PG----P 359 (507)
Q Consensus 306 ---D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~------i~V-------d~~~~t--~~~~IyA~GD~a----~~----~ 359 (507)
+.||.|+|.......+ +...-..++..+. ... -++.+. -+|++|++|-.+ +. |
T Consensus 226 ~~~~~VV~ATG~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~ 304 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAF-CAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP 304 (326)
T ss_dssp TTCCEEEECCCCC--CCSH-HHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCS
T ss_pred ccCCEEEECcCCCchHHHH-HHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCCh
Confidence 9999999987654322 1110011111111 111 112222 689999999777 22 3
Q ss_pred CcHhHHHHHHHHHHHHHc
Q 010573 360 MLAHKAEEDGVACVEFLA 377 (507)
Q Consensus 360 ~~~~~A~~~g~~aa~~i~ 377 (507)
-+.. -...|+.||+.|+
T Consensus 305 ~fg~-m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 305 TFGA-MALSGVHAAEQIL 321 (326)
T ss_dssp CCHH-HHHHHHHHHHHHH
T ss_pred hhhh-hhhhhHHHHHHHH
Confidence 2322 3457888888775
No 286
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.91 E-value=3.2e-05 Score=78.75 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=70.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..+++|||||+.|+.+|..|++. |.+|+++++.+.+.. . +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------~----------------------------~ 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR---------G----------------------------F 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST---------T----------------------------S
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc---------c----------------------------c
Confidence 46899999999999999999999 999999999654311 0 0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC---CEEEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~---~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
+ ..+...+.+.+++.||+++.+ .+..+.. ..+.+.+.+| .++.+|.||+|+|.+|..
T Consensus 230 d------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 230 D------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESG--AEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp C------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEESC
T ss_pred C------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCC--cEEEcCEEEEccCCCcCc
Confidence 0 011222345667789999887 3444432 2367777777 579999999999998853
No 287
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.91 E-value=3.8e-05 Score=78.01 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=69.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~d-- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-------------------------------------FD-- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-------------------------------------cC--
Confidence 468999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecC--CE--EEEEccCCceEEEEeCeEEEccCCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISP--SE--VSVDTIEGGNTVVKGKNIIIATGSDVKS 190 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~--~~--~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 190 (507)
..+...+.+.+++.||+++.+. +..+.. +. +.+.+.+|+ ..+.+|.||+|+|.+|..
T Consensus 226 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 226 ----------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSK-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSC-EEEEESEEEECSCEEECC
T ss_pred ----------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCc-EEEEcCEEEECCCCCCcc
Confidence 0111223455666789998873 444432 22 567776663 579999999999988864
No 288
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.90 E-value=3.6e-05 Score=78.42 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=69.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCcccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL---GLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV 119 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 119 (507)
..+++|||||+.|+.+|..|++. |.+|+||++.+.+-. . +
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------~----------------------------~ 233 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR---------G----------------------------F 233 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT---------T----------------------------S
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc---------c----------------------------c
Confidence 46899999999999999999999 999999998654311 0 0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC---CEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 120 DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP---SEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~---~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
+ ..+...+.+.+++.+|+++.+ .+..+.. ..+.+.+.+| .++.+|.||+|+|.+|.
T Consensus 234 d------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 234 D------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG--KTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp C------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEEC
T ss_pred C------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCC--cEEEcCEEEECCCCccc
Confidence 0 011222345667789999988 3444432 2366777777 57999999999998875
No 289
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.88 E-value=2e-05 Score=80.08 Aligned_cols=96 Identities=16% Similarity=0.150 Sum_probs=68.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~---------~----------------------------~~-- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ---------G----------------------------AD-- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------T----------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------c----------------------------cC--
Confidence 46899999999999999999999999999998654311 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccC----CceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIE----GGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~----g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..++ .+...+.+.+ | .++.+|.||+|+|.+|.
T Consensus 226 ----------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g--~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 226 ----------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPK--EPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp ----------HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCS--SCEEESCEEECCCEEEC
T ss_pred ----------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCc--eEEEcCEEEECcCCCcC
Confidence 011222345667788999887 444443 3345566554 4 46789999999999885
No 290
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.88 E-value=7.4e-05 Score=77.49 Aligned_cols=102 Identities=19% Similarity=0.258 Sum_probs=75.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC---------------------------------------C--
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS---------------------------------------M-- 253 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---------------------------------------~-- 253 (507)
-.|+|||+|..|+.+|..+++.|.+|+++++.+.+... .
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 47999999999999999999999999999987643100 0
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcC-
Q 010573 254 -----------------------------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG- 285 (507)
Q Consensus 254 -----------------------------------------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~- 285 (507)
...+...+.+.+++.||+++++++++++..++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 11233455667778899999999999998776
Q ss_pred CeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 286 DGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 286 ~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+.+. +.+.+ .++...++.+|.||+|+|....
T Consensus 282 g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 282 HSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTT
T ss_pred CcEEEEEEEe-CCCcEEEEEcCEEEEecCCccc
Confidence 6543 55442 2333347899999999997654
No 291
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.86 E-value=9.4e-05 Score=76.26 Aligned_cols=98 Identities=21% Similarity=0.305 Sum_probs=72.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC-ccC--C---------------------C------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA-DIV--P---------------------S------------------ 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~--~---------------------~------------------ 252 (507)
-.|+|||+|..|+++|..+++.|.+|.++++.+ .+. + .
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 469999999999999999999999999999763 110 0 0
Q ss_pred ------------CC-HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 ------------MD-GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 ------------~d-~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
.| ..+...+.+.+++ .|++++ +..|+.+..+++.+. |.+. ++.++.+|.||+|+|..++
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~-----dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTN-----LGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEET-----TSCEEECSEEEECCTTCBT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEEC-----CCcEEEeCEEEEccCCCcc
Confidence 01 1234556667776 599995 679999887766654 5543 4568999999999998765
Q ss_pred C
Q 010573 318 T 318 (507)
Q Consensus 318 ~ 318 (507)
.
T Consensus 182 ~ 182 (637)
T 2zxi_A 182 G 182 (637)
T ss_dssp C
T ss_pred C
Confidence 4
No 292
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.86 E-value=7.6e-05 Score=76.97 Aligned_cols=99 Identities=23% Similarity=0.334 Sum_probs=73.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC--------C-------------CCC----------------HHH
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV--------P-------------SMD----------------GEI 257 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------~-------------~~d----------------~~~ 257 (507)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. | .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875421 1 011 234
Q ss_pred HHHHHHHHHhcC--cEEEcCceEEEEEEcCC--eEEEEEeecCCCceEEEEcCEEEEeecC--CCCC
Q 010573 258 RKQFQRSLEKQK--MKFMLKTKVVGVDLSGD--GVKLTLEPAAGGEKTILEADVVLVSAGR--TPFT 318 (507)
Q Consensus 258 ~~~~~~~l~~~G--v~i~~~~~v~~i~~~~~--~v~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 318 (507)
.+.+....++.+ +.++++++|++++.+++ .+.+++. +++++.+|.||+|+|. .|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~-----~G~~~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTN-----HGDRIRARYLIMASGQLSVPQL 158 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEET-----TCCEEEEEEEEECCCSCCCCCC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEEC-----CCCEEEeCEEEECcCCCCCCCC
Confidence 455555555554 67889999999987643 5666654 4457999999999995 4544
No 293
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.86 E-value=0.00012 Score=75.84 Aligned_cols=103 Identities=18% Similarity=0.211 Sum_probs=75.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC---------------------------------------C-
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS---------------------------------------M- 253 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---------------------------------------~- 253 (507)
..+|+|||+|..|+.+|..+++.|.+|+++++.+.+... .
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999987643200 0
Q ss_pred ------------------------------------------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcC
Q 010573 254 ------------------------------------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG 285 (507)
Q Consensus 254 ------------------------------------------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~ 285 (507)
...+...+.+.+++.||+++++++++++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 11233456667778899999999999997665
Q ss_pred -CeEE-EEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 286 -DGVK-LTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 286 -~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+.+. +.+.+ .++...++.+|.||+|+|..+.
T Consensus 286 ~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCcc
Confidence 5443 55442 2333457999999999997664
No 294
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.86 E-value=4.3e-05 Score=77.99 Aligned_cols=96 Identities=20% Similarity=0.288 Sum_probs=69.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+... . +
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------~-------------------------------d-- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY------E-------------------------------D-- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC------S-------------------------------S--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------c-------------------------------C--
Confidence 468999999999999999999999999999986543110 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEec--CCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFIS--PSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.||+++.+ .+..+. ...+.+.+.+| .++.+|.||+|+|.+|.
T Consensus 223 ----------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 223 ----------ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDG--RTVEGSHALMTIGSVPN 280 (499)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTS--CEEEESEEEECCCEEEC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCC--cEEEcCEEEECCCCCcC
Confidence 011222345667789999877 344443 23366666666 67999999999999885
No 295
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.85 E-value=2.9e-05 Score=78.85 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=73.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC--CC----------CC-HHHHHHHHHHH-HhcCcEEEcCceE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV--PS----------MD-GEIRKQFQRSL-EKQKMKFMLKTKV 278 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~--~~----------~d-~~~~~~~~~~l-~~~Gv~i~~~~~v 278 (507)
.+++|||+|+.|+.+|..+++. |.+|+++++.+... +. .+ .++.....+.+ +..|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5799999999999999999986 88999999876531 00 01 11111223444 3459999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 279 VGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 279 ~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+.++.+++.+.+.. ..+++..++.+|.+|+|+|.+|...
T Consensus 117 ~~i~~~~~~v~v~~--~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDTEKKIVYAEH--TKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEETTTTEEEEEE--TTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCEEEEEE--cCCCceEEEEcCEEEECCCCcccCC
Confidence 99976666655542 1222334799999999999988764
No 296
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.84 E-value=5.7e-05 Score=76.36 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=69.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC-------------------------------CCCHH--------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-------------------------------SMDGE-------- 256 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~~d~~-------- 256 (507)
+|+|||+|+.|+.+|..+++.|.+|+++++.+.+.. .++..
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKDY 85 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHHh
Confidence 699999999999999999999999999996664310 11110
Q ss_pred ---HH--HHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEE--EEcCEEEEeecCCCCCCC
Q 010573 257 ---IR--KQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTI--LEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 257 ---~~--~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~--i~~D~vi~a~G~~p~~~~ 320 (507)
+. ..+.+.+++.|++++.+ .+..+ +.+.+.+... ++++ +.+|.+|+|+|.+|....
T Consensus 86 ~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~V~~~-----~g~~~~~~~d~lviAtG~~p~~p~ 148 (466)
T 3l8k_A 86 VQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHVIVKTD-----EGKEIEAETRYMIIASGAETAKLR 148 (466)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEEEEEET-----TSCEEEEEEEEEEECCCEEECCCC
T ss_pred heeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeEEEEcC-----CCcEEEEecCEEEECCCCCccCCC
Confidence 01 33445566779999876 56666 3556666543 3345 999999999999887653
No 297
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.84 E-value=8.6e-05 Score=75.62 Aligned_cols=98 Identities=23% Similarity=0.331 Sum_probs=69.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..|++.|.+|+++++.+.+... ++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~d-- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-------------------------------------MD-- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-------------------------------------CC--
Confidence 468999999999999999999999999999986543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe--cCCEEEEEccC---CceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI--SPSEVSVDTIE---GGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--d~~~~~v~~~~---g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+ +.+.+.+.+.+ |+..++.+|.||+|+|.+|.
T Consensus 239 ----------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 239 ----------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred ----------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 0112223455677899998874 4333 34455555442 54578999999999999885
No 298
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.84 E-value=8.2e-05 Score=75.70 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=66.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..|++.|.+|+++++...+.. ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~--------------------------------------~d-- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG--------------------------------------FD-- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT--------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc--------------------------------------CC--
Confidence 35799999999999999999999999999998421100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe---cCCEEEEEccC---CceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFI---SPSEVSVDTIE---GGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---d~~~~~v~~~~---g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+ +...+.+.+.+ |+..++.+|.||+|+|.+|.
T Consensus 225 ----------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 225 ----------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 0112223456777899998874 3333 33445554433 53446899999999998874
No 299
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.83 E-value=2.7e-05 Score=79.38 Aligned_cols=105 Identities=13% Similarity=0.246 Sum_probs=73.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-C-C--------CCCH-HHHHHHHHHH--HhcCcEEEcCceEEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-V-P--------SMDG-EIRKQFQRSL--EKQKMKFMLKTKVVGV 281 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~-~--------~~d~-~~~~~~~~~l--~~~Gv~i~~~~~v~~i 281 (507)
++|||||+|+.|+.+|..|.+.+.+||+|++++.. . | .+++ ++...+.+.+ ++.+++++. .++++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~-~~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYE-AEATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEE-EEEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEE-EEEEEE
Confidence 58999999999999999999999999999988753 1 1 1222 1111123332 345788874 578888
Q ss_pred EEcCCeEEEEEee-------------cCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 282 DLSGDGVKLTLEP-------------AAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 282 ~~~~~~v~v~~~~-------------~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.+...+.+...+ ...+++.++++|.+|+|+|.+|+...
T Consensus 122 D~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ 173 (502)
T 4g6h_A 122 NPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG 173 (502)
T ss_dssp EGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT
T ss_pred EhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC
Confidence 8777766654311 11245678999999999999998754
No 300
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.82 E-value=8.4e-05 Score=73.58 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=69.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-------CCHHHH------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-------MDGEIR------------------------------ 258 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------~d~~~~------------------------------ 258 (507)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... +.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999987654210 111110
Q ss_pred -----------------------------HHHHHHHH-hcCcEEEcCceEEEEEEcC-CeEEEEEeecCCCceEEEEcCE
Q 010573 259 -----------------------------KQFQRSLE-KQKMKFMLKTKVVGVDLSG-DGVKLTLEPAAGGEKTILEADV 307 (507)
Q Consensus 259 -----------------------------~~~~~~l~-~~Gv~i~~~~~v~~i~~~~-~~v~v~~~~~~~g~~~~i~~D~ 307 (507)
..+.+.|. ..+..++++++++.++..+ +++++++. +++++.+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~-----dG~~~~adl 157 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFA-----DGSHENVDV 157 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEET-----TSCEEEESE
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEEC-----CCCEEEeeE
Confidence 11223222 2244678889999997654 46788876 567899999
Q ss_pred EEEeecCCCC
Q 010573 308 VLVSAGRTPF 317 (507)
Q Consensus 308 vi~a~G~~p~ 317 (507)
||-|.|....
T Consensus 158 vVgADG~~S~ 167 (412)
T 4hb9_A 158 LVGADGSNSK 167 (412)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCCCcc
Confidence 9999998764
No 301
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.82 E-value=1.2e-05 Score=81.54 Aligned_cols=43 Identities=26% Similarity=0.432 Sum_probs=38.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-cEEEEecCCCCCceecc
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKRGALGGTCLN 84 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~~~ 84 (507)
..+||+|||||++|+++|..|++.|+ +|+|+|+++.+||.|..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 35799999999999999999999998 89999999999998754
No 302
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.80 E-value=8.4e-06 Score=81.99 Aligned_cols=89 Identities=22% Similarity=0.251 Sum_probs=69.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc-------CC--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-------VP--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-------~~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .| .+++++.....+.+++.|+++++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 3678999999999999999999999999999998764 23 2466777778888999999999988652
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.. +++. + ..+.+|.|++|+|..
T Consensus 197 --~~--v~~~-----~-~~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 --RD--ASLP-----E-LRRKHVAVLVATGVY 218 (456)
T ss_dssp --TT--BCHH-----H-HHSSCSEEEECCCCC
T ss_pred --cE--EEhh-----H-hHhhCCEEEEecCCC
Confidence 11 2221 1 135699999999986
No 303
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.79 E-value=0.00014 Score=73.67 Aligned_cols=98 Identities=19% Similarity=0.233 Sum_probs=68.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..|++.|.+|+++++.+.+... .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~~-- 220 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-------------------------------------VD-- 220 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-------------------------------------cC--
Confidence 468999999999999999999999999999996543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEe--cCCEEEEEccCCc-eEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVSVDTIEGG-NTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--d~~~~~v~~~~g~-~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+ .+..+ +.+.+.+.+.++. ...+.+|.||+|+|.+|.
T Consensus 221 ----------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 221 ----------EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp ----------HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 011222345667789999887 34443 3344555555432 367999999999998875
No 304
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.75 E-value=2e-05 Score=83.35 Aligned_cols=43 Identities=30% Similarity=0.569 Sum_probs=39.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
...+||+|||||++|++||..|++.|++|+|+|+.+.+||.+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 4568999999999999999999999999999999999998654
No 305
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.75 E-value=0.00019 Score=72.50 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=68.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..+++.|.+|+++++.+.+... ++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-------------------------------------~~-- 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-------------------------------------FD-- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-------------------------------------cC--
Confidence 468999999999999999999999999999985432100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEecC--C-EEEEE-ccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFISP--S-EVSVD-TIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~d~--~-~~~v~-~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.|++++.+ .+..+.. + .+.+. +.+| . +.+|.||+|+|.+|.
T Consensus 211 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g--~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 ----------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHG--E-IVADQVMLALGRMPN 269 (463)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSC--E-EEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCC--e-EEeCEEEEeeCcccC
Confidence 011223345677789999886 3444432 2 25677 7777 5 999999999998875
No 306
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.73 E-value=0.00015 Score=73.50 Aligned_cols=98 Identities=19% Similarity=0.105 Sum_probs=68.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~d-- 227 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-------------------------------------FD-- 227 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-------------------------------------SC--
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-------------------------------------cC--
Confidence 468999999999999999999999999999985543110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec--C-C-EEEEEccC---Cce--EEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS--P-S-EVSVDTIE---GGN--TVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d--~-~-~~~v~~~~---g~~--~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+. . . .+.+.+.+ ++. ..+.+|.||+|+|.+|.
T Consensus 228 ----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 228 ----------SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 0112223456677899998874 44443 2 2 35565554 222 68999999999998875
No 307
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.72 E-value=0.00015 Score=73.22 Aligned_cols=101 Identities=19% Similarity=0.297 Sum_probs=68.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc--------------------------cCCC----------CC-HH
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD--------------------------IVPS----------MD-GE 256 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~--------------------------~~~~----------~d-~~ 256 (507)
..+++|||+|+.|+.+|..+++.|.+|+++++... ..+. .+ +.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK 83 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHHH
Confidence 36799999999999999999999999999997730 0111 11 11
Q ss_pred HHH-------H-----HHHHHHhc-CcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 257 IRK-------Q-----FQRSLEKQ-KMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 257 ~~~-------~-----~~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
+.. . ..+.+++. |++++.+. +..+ +.+.+.+.+. +++.+++.+|.+|+|+|.+|....
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~--~~~~~~v~~~---~g~~~~~~~d~lviAtGs~p~~p~ 154 (467)
T 1zk7_A 84 LLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFK--DDQSLTVRLN---EGGERVVMFDRCLVATGASPAVPP 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEE--ETTEEEEEET---TSSEEEEECSEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEc--cCCEEEEEeC---CCceEEEEeCEEEEeCCCCCCCCC
Confidence 111 1 12445556 99998763 5555 3455666543 222368999999999999887653
No 308
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.71 E-value=0.00031 Score=71.59 Aligned_cols=60 Identities=10% Similarity=0.041 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+...+.+.+++.|++++.+++|+++..+++.+.+++.+..+|+..++.+|.||.|+|...
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 344456666778999999999999987776666766533334445799999999999764
No 309
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.71 E-value=0.00036 Score=71.96 Aligned_cols=99 Identities=13% Similarity=0.258 Sum_probs=74.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC------------------------------C------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP------------------------------S------------ 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------~------------ 252 (507)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 3699999999999999999999999999997643210 0
Q ss_pred -------C---------------------C-HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEE
Q 010573 253 -------M---------------------D-GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTIL 303 (507)
Q Consensus 253 -------~---------------------d-~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i 303 (507)
+ + ..+.+.+.+.+++. +++++++++++.+++++.+++.+..+|...++
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i 183 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAV 183 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEE
Confidence 0 0 12344455555554 88899999999888888888875333444689
Q ss_pred EcCEEEEeecCCC
Q 010573 304 EADVVLVSAGRTP 316 (507)
Q Consensus 304 ~~D~vi~a~G~~p 316 (507)
.+|.||.|.|...
T Consensus 184 ~a~~vVgADG~~S 196 (549)
T 2r0c_A 184 HARYLVACDGASS 196 (549)
T ss_dssp EEEEEEECCCTTC
T ss_pred EeCEEEECCCCCc
Confidence 9999999999654
No 310
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.71 E-value=2.3e-05 Score=77.03 Aligned_cols=35 Identities=31% Similarity=0.416 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCcEEEEecCCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKRGAL 78 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~ 78 (507)
+||+|||||++|+++|..|++. |++|+|+|+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999997765
No 311
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.70 E-value=3e-05 Score=83.47 Aligned_cols=42 Identities=31% Similarity=0.592 Sum_probs=38.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCcee
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTC 82 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 82 (507)
...+||+|||||++|++||..|++.|++|+|+|+.+.+||.+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 446799999999999999999999999999999999999864
No 312
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.70 E-value=1.8e-05 Score=76.91 Aligned_cols=34 Identities=29% Similarity=0.252 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCC------CcEEEEecCCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLG------LKTTCIEKRGA 77 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g------~~V~lie~~~~ 77 (507)
+||+|||||++|+++|++|++.| .+|+|+|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 99999999653
No 313
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.69 E-value=0.00013 Score=74.23 Aligned_cols=97 Identities=19% Similarity=0.253 Sum_probs=68.0
Q ss_pred CCcEEEECCChHHHHHHHHHHH----CCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQ----LGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE 118 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~----~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 118 (507)
..+++|||||+.|+.+|..|++ .|.+|+++++.+.+-+. .+|
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~-----~l~----------------------------- 225 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK-----ILP----------------------------- 225 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT-----TSC-----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc-----cCC-----------------------------
Confidence 4689999999999999999887 47899999885432110 000
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 119 VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.||+++.+ .+..+ +...+.+.+.+| .++.+|.||+|+|.+|.
T Consensus 226 --------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG--~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 226 --------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDG--RKVETDHIVAAVGLEPN 283 (493)
T ss_dssp --------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTS--CEEEESEEEECCCEEEC
T ss_pred --------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCC--CEEECCEEEECCCCCcc
Confidence 001122345667789999887 34444 334566777787 68999999999999875
No 314
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.69 E-value=4.6e-05 Score=77.57 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=73.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC----------CCC---HHHHHHHHHHHHhcCcEEEcCceEEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----------SMD---GEIRKQFQRSLEKQKMKFMLKTKVVGV 281 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~~d---~~~~~~~~~~l~~~Gv~i~~~~~v~~i 281 (507)
.+|+|||+|+.|+.+|..|++. .+|+++++.+.+.. .++ .++...+.+.+ +.|++++.++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 5799999999999999999999 99999998775411 111 23333334444 669999999999988
Q ss_pred EEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCCCC
Q 010573 282 DLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 282 ~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
..+++.+.+...+ .++...+.+|.+|+|+|..|...
T Consensus 187 ~~~~~~~~~~~~~--~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 187 FDKGEYFLVPVVR--GDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp EECSSSEEEEEEE--TTEEEEEEESCEEECCCEEECCC
T ss_pred EcCCcEEEEEEec--CCeEEEEECCEEEECCCCCccCC
Confidence 7766655544321 22234799999999999988654
No 315
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.66 E-value=0.00016 Score=73.36 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=68.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..+++.|.+|+++++.+.+.. . ++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~---------~----------------------------~~-- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR---------N----------------------------FD-- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------T----------------------------SC--
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc---------c----------------------------cC--
Confidence 46899999999999999999999999999998543211 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEe--cCCEEEEEccCCceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKG-YGKFI--SPSEVSVDTIEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--d~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.|++++.+ .+..+ +...+.+.+.+| .++.+|.||+|+|.+|.
T Consensus 232 ----------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 232 ----------YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNG--QTICADRVMLATGRVPN 289 (484)
T ss_dssp ----------HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTS--CEEEESEEEECCCEEEC
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCC--cEEEcCEEEEeeCCCcC
Confidence 011122345566678998876 34443 334567777777 67999999999998875
No 316
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.65 E-value=0.0002 Score=72.70 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=66.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||+|+.|+..|..|++.|.+|+++++...+.+ ++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~--------------------------------------~d-- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG--------------------------------------FD-- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT--------------------------------------SC--
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc--------------------------------------cC--
Confidence 35799999999999999999999999999988321100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEec---CCEEEEEccCC---ceEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFIS---PSEVSVDTIEG---GNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d---~~~~~v~~~~g---~~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +..+. ...+.+.+.++ +..++.+|.||+|+|.+|.
T Consensus 227 ----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 227 ----------QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp ----------HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 0112223456677899998874 44442 22355554443 3468999999999998874
No 317
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.61 E-value=0.00045 Score=71.77 Aligned_cols=103 Identities=22% Similarity=0.279 Sum_probs=76.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc------CCeeEEEcccCccCCC------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL------GSEVTVVEFAADIVPS------------------------------------ 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~------------------------------------ 252 (507)
-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4699999999999999999999 9999999976432100
Q ss_pred ---------C---C--------------HHHHHHHHHHHHhcCcEEEcCceEEEEEEcCC-eEE-EEEee---cCCCc--
Q 010573 253 ---------M---D--------------GEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGD-GVK-LTLEP---AAGGE-- 299 (507)
Q Consensus 253 ---------~---d--------------~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~-~v~-v~~~~---~~~g~-- 299 (507)
+ + ..+.+.+.+.+++.|+++++++.++++..+++ .+. |.+.+ ..+|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 1 14456677777888999999999999987654 343 65532 01222
Q ss_pred -----eEEEEcCEEEEeecCCCC
Q 010573 300 -----KTILEADVVLVSAGRTPF 317 (507)
Q Consensus 300 -----~~~i~~D~vi~a~G~~p~ 317 (507)
+.++.+|.||.|.|....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCceEEECCEEEEeeCCCch
Confidence 358999999999998764
No 318
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.61 E-value=3.1e-05 Score=77.97 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=68.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCccC--------CCC--CHHHHHHHHHHHHhcCcEEEcCceEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIV--------PSM--DGEIRKQFQRSLEKQKMKFMLKTKVVG 280 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~~~--d~~~~~~~~~~l~~~Gv~i~~~~~v~~ 280 (507)
.+++++|||+|+.|+.+|..|.+.| .+|+++++.+.+. +.+ .+++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3678999999999999999999998 8999999887654 222 23566777788888999999887662
Q ss_pred EEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 281 VDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 281 i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.. +++. + ..+.+|.||+|||..|
T Consensus 84 -----~~--V~~~-----~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -----RD--VTVQ-----E-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp -----TT--BCHH-----H-HHHHSSEEEECCCCCE
T ss_pred -----eE--EEec-----c-ceEEcCEEEEecCcCC
Confidence 11 2221 1 2468999999999885
No 319
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.60 E-value=0.00034 Score=71.63 Aligned_cols=97 Identities=16% Similarity=0.245 Sum_probs=64.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccChH
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP 122 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 122 (507)
..+++|||||+.|+..|..|++.|.+|+++++...+.. ++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~--------------------------------------~d-- 249 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG--------------------------------------FD-- 249 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT--------------------------------------SC--
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc--------------------------------------CC--
Confidence 35799999999999999999999999999998321100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EE---EecC---CEEEEE--ccCCc-eEEEEeCeEEEccCCCCC
Q 010573 123 AMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GK---FISP---SEVSVD--TIEGG-NTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~---~~d~---~~~~v~--~~~g~-~~~~~~d~lvlAtG~~p~ 189 (507)
..+...+.+.+++.+|+++.+. +. ..+. ..+.+. ..+++ ...+.+|.||+|+|.+|.
T Consensus 250 ----------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 250 ----------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp ----------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEES
T ss_pred ----------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCccc
Confidence 0112223456677899998873 22 2222 334443 33443 356889999999998874
No 320
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.58 E-value=0.00033 Score=73.13 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+++|||||+.|+.+|..|++.|.+|+++++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999984
No 321
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.55 E-value=3.4e-05 Score=81.47 Aligned_cols=35 Identities=37% Similarity=0.602 Sum_probs=32.6
Q ss_pred CCcEEEECCChHHHHHHHHHHH-----CCCcEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQ-----LGLKTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~-----~g~~V~lie~~~~ 77 (507)
.+||+||||||+|+++|..|++ .|.+|+||||.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4799999999999999999999 9999999999654
No 322
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.53 E-value=0.00011 Score=72.91 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcCcEEEcCceEE---------EEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 257 IRKQFQRSLEKQKMKFMLKTKVV---------GVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 257 ~~~~~~~~l~~~Gv~i~~~~~v~---------~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+...+.+.+++.|++++.+++|+ +++.+++.+.+.+. ++ ++.+|.||+|+|...
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~-----~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHE-----TR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBC-----CE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEEC-----Cc-EEECCEEEECCCccH
Confidence 44556677778899999999999 87655555544321 33 799999999999764
No 323
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.53 E-value=0.00052 Score=72.14 Aligned_cols=102 Identities=17% Similarity=0.300 Sum_probs=76.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHh-cCCeeEEEcccCccCC------------------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWAR-LGSEVTVVEFAADIVP------------------------------------------ 251 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~~~------------------------------------------ 251 (507)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 469999999999999999999 9999999987643210
Q ss_pred -------------------C-----CC-HHHHHHHHHHHHhcCc--EEEcCceEEEEEEcCC----eEEEEEeec---CC
Q 010573 252 -------------------S-----MD-GEIRKQFQRSLEKQKM--KFMLKTKVVGVDLSGD----GVKLTLEPA---AG 297 (507)
Q Consensus 252 -------------------~-----~d-~~~~~~~~~~l~~~Gv--~i~~~~~v~~i~~~~~----~v~v~~~~~---~~ 297 (507)
. ++ ..+...+.+.+++.|+ ++++++++++++.+++ ++.+++.+. .+
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 00 2455567777778876 9999999999987653 577777641 13
Q ss_pred CceEEEEcCEEEEeecCCC
Q 010573 298 GEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 298 g~~~~i~~D~vi~a~G~~p 316 (507)
|..+++.+|.||.|.|...
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 4456899999999999653
No 324
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.51 E-value=3.5e-05 Score=77.55 Aligned_cols=88 Identities=20% Similarity=0.321 Sum_probs=67.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh-c------CCeeEEEcccCccC--------C--CCCHHHHHHHHHHHHhcCcEEEcCc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWAR-L------GSEVTVVEFAADIV--------P--SMDGEIRKQFQRSLEKQKMKFMLKT 276 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~-~------g~~Vtlv~~~~~~~--------~--~~d~~~~~~~~~~l~~~Gv~i~~~~ 276 (507)
+++|+|||+|+.|+.+|..|.+ . |.+|+++++.+.+. + ...+++...+.+.+++.|++++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 99999999887643 1 1234566777788888899999885
Q ss_pred eEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 277 KVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 277 ~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.+ +.. +++. ++ .+.+|.||+|+|..
T Consensus 83 ~v------~~~--v~~~-----~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV------GEH--VQPG-----EL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB------TTT--BCHH-----HH-HHHSSEEEECCCCC
T ss_pred EE------CCE--EEEC-----CC-eEeCCEEEEeeCCC
Confidence 53 122 2222 22 47899999999997
No 325
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.49 E-value=0.00012 Score=77.67 Aligned_cols=87 Identities=28% Similarity=0.388 Sum_probs=66.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---------CCCC--HHHHHHHHHHHHhcCcEEEcCceEEEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---------PSMD--GEIRKQFQRSLEKQKMKFMLKTKVVGVD 282 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------~~~d--~~~~~~~~~~l~~~Gv~i~~~~~v~~i~ 282 (507)
.++|+|||+|+.|+.+|..+++.|.+|+++++.+.+. +... .+....+.+.+++.||++++++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 4689999999999999999999999999999876542 1111 23445567778888999998875431
Q ss_pred EcCCeEEEEEeecCCCceEEE-EcCEEEEeecCCCCCCC
Q 010573 283 LSGDGVKLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAG 320 (507)
Q Consensus 283 ~~~~~v~v~~~~~~~g~~~~i-~~D~vi~a~G~~p~~~~ 320 (507)
..+ .+|.||+|||.+|....
T Consensus 451 ------------------~~~~~~d~lviAtG~~p~~~~ 471 (671)
T 1ps9_A 451 ------------------DQLQAFDETILASGIVPRTPP 471 (671)
T ss_dssp ------------------SSSCCSSEEEECCCEEECCCC
T ss_pred ------------------HHhhcCCEEEEccCCCcCCCC
Confidence 113 78999999999987653
No 326
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.48 E-value=0.00079 Score=68.77 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhcCcEEEcCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcC-EEEEeecCCC
Q 010573 256 EIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEAD-VVLVSAGRTP 316 (507)
Q Consensus 256 ~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~-v~~~~~~~g~~~~i~~D-~vi~a~G~~p 316 (507)
.+...+.+.+++.|++++++++++++..+ ++.+. +.+.. ++...++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChh
Confidence 34455666677889999999999999877 45443 55443 2334579996 9999999665
No 327
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.48 E-value=0.0012 Score=63.02 Aligned_cols=163 Identities=15% Similarity=0.196 Sum_probs=99.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccCC---------------------------CC-----------C
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIVP---------------------------SM-----------D 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~---------------------------~~-----------d 254 (507)
-.|+|||+|+.|+.+|..+++. |.+|+++++.+.+.. .+ .
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 4799999999999999999997 999999998754310 00 1
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCceEEEEEEcC-----------------C--eEE-EEEee---cCC------CceEEEE
Q 010573 255 GEIRKQFQRSLEK-QKMKFMLKTKVVGVDLSG-----------------D--GVK-LTLEP---AAG------GEKTILE 304 (507)
Q Consensus 255 ~~~~~~~~~~l~~-~Gv~i~~~~~v~~i~~~~-----------------~--~v~-v~~~~---~~~------g~~~~i~ 304 (507)
.++.+.+.+.+++ .|++++.++.++++..++ + .+. +.+.. ... .+..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 2344556666666 599999999999886654 2 222 22211 011 2456899
Q ss_pred cCEEEEeecCCCCCCCCCC---cccCce--ecCCCCeecC-------CCCCCCCCCeEEecCCC----C----CCCcHhH
Q 010573 305 ADVVLVSAGRTPFTAGLGL---DKIGVE--TDKMGRIPVN-------ERFATNIPGVYAIGDVI----P----GPMLAHK 364 (507)
Q Consensus 305 ~D~vi~a~G~~p~~~~l~~---~~~gl~--~~~~G~i~Vd-------~~~~t~~~~IyA~GD~a----~----~~~~~~~ 364 (507)
++.||.|+|.......... ...++. +......+.+ ++-+--+||+|++|=.+ + +|.+..
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg~- 318 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEIDGANRMGPTFGA- 318 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHHTCEECCSCCHH-
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhcCCCCCCcccce-
Confidence 9999999998765321101 111221 1111112211 11222369999999766 2 333332
Q ss_pred HHHHHHHHHHHHcC
Q 010573 365 AEEDGVACVEFLAG 378 (507)
Q Consensus 365 A~~~g~~aa~~i~~ 378 (507)
=...|+.||+.++.
T Consensus 319 m~~sg~~~a~~~~~ 332 (344)
T 3jsk_A 319 MALSGVKAAHEAIR 332 (344)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHH
Confidence 34578888877753
No 328
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.47 E-value=0.0014 Score=65.19 Aligned_cols=35 Identities=40% Similarity=0.403 Sum_probs=31.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 36999999999999999999999999999987654
No 329
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.45 E-value=0.00086 Score=70.70 Aligned_cols=102 Identities=19% Similarity=0.274 Sum_probs=74.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHh-----cCCeeEEEcccCccCC--C---CC------------------------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWAR-----LGSEVTVVEFAADIVP--S---MD------------------------------ 254 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~-----~g~~Vtlv~~~~~~~~--~---~d------------------------------ 254 (507)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... . +.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~~ 88 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALYN 88 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEEE
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEEe
Confidence 369999999999999999999 9999999997643210 0 00
Q ss_pred ------------------------------HHHHHHHHHHHHhcC---cEEEcCceEEEEEEcC--------CeEEEEEe
Q 010573 255 ------------------------------GEIRKQFQRSLEKQK---MKFMLKTKVVGVDLSG--------DGVKLTLE 293 (507)
Q Consensus 255 ------------------------------~~~~~~~~~~l~~~G---v~i~~~~~v~~i~~~~--------~~v~v~~~ 293 (507)
..+.+.+.+.+++.| +++++++.++.++.++ .++.+++.
T Consensus 89 ~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~ 168 (665)
T 1pn0_A 89 PDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLR 168 (665)
T ss_dssp ECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEE
T ss_pred CCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEE
Confidence 123345556666666 8999999999998764 46788776
Q ss_pred ec---------------------------------------CCCceEEEEcCEEEEeecCCC
Q 010573 294 PA---------------------------------------AGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 294 ~~---------------------------------------~~g~~~~i~~D~vi~a~G~~p 316 (507)
+. .+|..+++.+|+||-|.|.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S 230 (665)
T 1pn0_A 169 YMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS 230 (665)
T ss_dssp ECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTC
T ss_pred ecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCC
Confidence 42 234447899999999999653
No 330
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.45 E-value=0.00055 Score=72.66 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=71.2
Q ss_pred CCcEEEEC--CChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIG--GGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG--~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+|+||| +|..|+.+|..|++.|.+|+++++.+.+..... .. .
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~------------~~----------------------~ 568 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN------------NT----------------------F 568 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG------------GG----------------------T
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc------------cc----------------------h
Confidence 35699999 999999999999999999999998654322100 00 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEc-cCCceEEEEeCeEEEccCCCCC
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDT-IEGGNTVVKGKNIIIATGSDVK 189 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~-~~g~~~~~~~d~lvlAtG~~p~ 189 (507)
....+.+.+++.+|+++.+. +..++.+...+.. .+++..++.+|.||+|+|.+|.
T Consensus 569 --------------~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 569 --------------EVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp --------------CHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred --------------hHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 01112355677899999884 6667777766653 2344578999999999999875
No 331
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.43 E-value=4.9e-05 Score=84.30 Aligned_cols=93 Identities=19% Similarity=0.276 Sum_probs=70.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCccC-------C--CCCHHHHHHHHHHHHhcCcEEEcCceEEEEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADIV-------P--SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDL 283 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~~-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 283 (507)
+++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. + .++.+......+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 5789999999999999999999998 799999876542 2 23556666677888899999999877631
Q ss_pred cCCeEEEEEeecCCCceEEEEcCEEEEeecC-CCCC
Q 010573 284 SGDGVKLTLEPAAGGEKTILEADVVLVSAGR-TPFT 318 (507)
Q Consensus 284 ~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 318 (507)
.. +++. ++.++.+|.||+|+|. +|..
T Consensus 264 --~~--v~~~-----~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 --NE--ITLN-----TLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp --TS--BCHH-----HHHHTTCCEEEECCCCCEECC
T ss_pred --ce--EEhh-----hcCccCCCEEEEecCCCCCCC
Confidence 11 2221 2335679999999998 4764
No 332
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.41 E-value=0.001 Score=66.12 Aligned_cols=48 Identities=21% Similarity=0.317 Sum_probs=38.0
Q ss_pred HHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 263 RSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 263 ~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
+.+++.|++++++++|++++.+++++ ++ . +++++.+|.||+|+|....
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~~~~v-V~-~-----~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIEEKKV-YT-R-----DNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETTTTEE-EE-T-----TCCEEECSEEEECSCHHHH
T ss_pred HHHHHCCCEEEcCCeEEEEEEECCEE-EE-e-----CCcEEEeCEEEECCCHHHH
Confidence 44566799999999999998877777 43 2 4568999999999996543
No 333
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.39 E-value=0.00068 Score=74.61 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=72.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC---CC-----C----CHHHHHHHHHHHHhc-CcEEEcCceEEE
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV---PS-----M----DGEIRKQFQRSLEKQ-KMKFMLKTKVVG 280 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~-----~----d~~~~~~~~~~l~~~-Gv~i~~~~~v~~ 280 (507)
..+|+|||+|+.|+.+|..+++.|.+|+++++.+.+. .. + ..+....+.+.+.+. +++++.++.+..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 3579999999999999999999999999999876541 01 1 123444555566664 999999999988
Q ss_pred EEEcCCeEEEEEee----cC------CCceEEEEcCEEEEeecCCCCCC
Q 010573 281 VDLSGDGVKLTLEP----AA------GGEKTILEADVVLVSAGRTPFTA 319 (507)
Q Consensus 281 i~~~~~~v~v~~~~----~~------~g~~~~i~~D~vi~a~G~~p~~~ 319 (507)
+...+....+.... .. .++..++.+|.+|+|||..|...
T Consensus 208 i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~ 256 (965)
T 2gag_A 208 SYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPI 256 (965)
T ss_dssp EETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCC
T ss_pred eecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCC
Confidence 85332211121100 00 11234799999999999988654
No 334
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.35 E-value=0.0017 Score=66.87 Aligned_cols=53 Identities=25% Similarity=0.330 Sum_probs=39.1
Q ss_pred HHHHHHHhcCcEEEcCceEEEEEEcCCe--EEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 260 QFQRSLEKQKMKFMLKTKVVGVDLSGDG--VKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 260 ~~~~~l~~~Gv~i~~~~~v~~i~~~~~~--v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+.+++.|++++.+ +|++++.++++ +.+++. +++++.+|.||.|+|.....
T Consensus 170 ~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~-----~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 170 FLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTK-----EGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEET-----TSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEEC-----CCcEEEeCEEEECCCCchhh
Confidence 3445556679999999 89999875544 345543 34579999999999987654
No 335
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.33 E-value=0.0011 Score=66.78 Aligned_cols=98 Identities=19% Similarity=0.310 Sum_probs=69.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCC----------C---------------------------------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP----------S--------------------------------- 252 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~--------------------------------- 252 (507)
.|+|||+|..|+-+|..+++.|.+|+++++...-.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 389999999999999999999999999987610000 0
Q ss_pred --------------C----------------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeec
Q 010573 253 --------------M----------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPA 295 (507)
Q Consensus 253 --------------~----------------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~ 295 (507)
+ ..++...+.+.+++.|++++.++.+ ++..+++.+. +.+.+
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~- 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEK- 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETT-
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEe-
Confidence 0 0123344555566789999999999 9976666553 33321
Q ss_pred CCCceEEEEcCEEEEeecCCCCC
Q 010573 296 AGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 296 ~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+..++.+|.||+|+|..+..
T Consensus 159 ---~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 159 ---RGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp ---TEEECCCSEEEECCCCCGGG
T ss_pred ---CCCeEEeeeEEECCCCCccc
Confidence 22357799999999987754
No 336
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.28 E-value=0.00018 Score=74.32 Aligned_cols=37 Identities=32% Similarity=0.658 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
...||++|||+|++|+.+|.+|++.|.+|+|+|+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3469999999999999999999999999999999653
No 337
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.27 E-value=0.0019 Score=67.17 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=70.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCccCC-----------CC---------------------C-------
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADIVP-----------SM---------------------D------- 254 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~~-----------~~---------------------d------- 254 (507)
.|+|||+|..|+-+|..+++.| .+|+++++.+.... .+ +
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 86 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYF 86 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5999999999999999999999 99999987532100 00 0
Q ss_pred -----------------------------------------------HHHHHHHHHHHHhcC-cEEEcCceEEEEEEcCC
Q 010573 255 -----------------------------------------------GEIRKQFQRSLEKQK-MKFMLKTKVVGVDLSGD 286 (507)
Q Consensus 255 -----------------------------------------------~~~~~~~~~~l~~~G-v~i~~~~~v~~i~~~~~ 286 (507)
..+...+.+.+++.| |+++.++.++++..+++
T Consensus 87 ~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g 166 (602)
T 1kf6_A 87 VHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDG 166 (602)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCC
Confidence 123334445555677 99999999999987766
Q ss_pred eEE-EEEeecCCCceEEEEcCEEEEeecC
Q 010573 287 GVK-LTLEPAAGGEKTILEADVVLVSAGR 314 (507)
Q Consensus 287 ~v~-v~~~~~~~g~~~~i~~D~vi~a~G~ 314 (507)
.+. +.+.+..+|....+.++.||+|+|.
T Consensus 167 ~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 167 HVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp EEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred EEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 543 3333323343347999999999995
No 338
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.17 E-value=0.00038 Score=72.02 Aligned_cols=44 Identities=25% Similarity=0.405 Sum_probs=40.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceec
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCL 83 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 83 (507)
+...|||+|||+|..|...|..|++.|++|++|||++..||.|.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 33469999999999999999999999999999999999999764
No 339
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.14 E-value=0.00013 Score=76.57 Aligned_cols=36 Identities=22% Similarity=0.503 Sum_probs=33.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--------CcEEEEecCC-CC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLG--------LKTTCIEKRG-AL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g--------~~V~lie~~~-~~ 78 (507)
.++|+|||||++|++||..|++.| ++|+|+|+++ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999988 9999999988 88
No 340
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.14 E-value=0.00025 Score=73.20 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=33.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CcEEEEecCCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKRGA 77 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~~ 77 (507)
...||+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 34599999999999999999999987 79999999654
No 341
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.10 E-value=0.00027 Score=72.54 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=31.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHH-CCCcEEEEecCCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGA 77 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~ 77 (507)
...||+||||+|+||..+|.+|++ .+++|+|+|+...
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 346999999999999999999998 5799999999543
No 342
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.07 E-value=0.0026 Score=64.64 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=75.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC--------------CeeEEEcccCcc-------CCC--------------------C-
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG--------------SEVTVVEFAADI-------VPS--------------------M- 253 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~-------~~~--------------------~- 253 (507)
.|+|||+|+.|+-+|..|.+.| ....++++.+.+ ++. +
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999887643 245566665432 110 0
Q ss_pred -----------------------CHHHHHHHHHHHHhcCcEEEcCceEEEEEEcC--------CeEEEEEeecCCCceEE
Q 010573 254 -----------------------DGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSG--------DGVKLTLEPAAGGEKTI 302 (507)
Q Consensus 254 -----------------------d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~--------~~v~v~~~~~~~g~~~~ 302 (507)
-.++.+.++...++.+..++++++|++++..+ +...|+..+..++..++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 02445555555555667788999999997643 24678887777778889
Q ss_pred EEcCEEEEeecCCCCCCC
Q 010573 303 LEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 303 i~~D~vi~a~G~~p~~~~ 320 (507)
+.++.||+|+|..|....
T Consensus 201 ~~ar~vVlatG~~P~iP~ 218 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMPS 218 (501)
T ss_dssp EEEEEEEECCCCEECCCT
T ss_pred EEeCEEEECcCCCCCCCC
Confidence 999999999999887764
No 343
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.07 E-value=0.00019 Score=73.77 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
..||+||||+|+||+.+|.+|++ |.+|+|+|+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 45999999999999999999999 999999999543
No 344
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.04 E-value=0.00029 Score=69.08 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=66.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc--CCeeEEEcccCccC-----------------------CC-----------------
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL--GSEVTVVEFAADIV-----------------------PS----------------- 252 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~-----------------------~~----------------- 252 (507)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+. ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3699999999999999999999 99999999865430 00
Q ss_pred ---------------CCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCCCC
Q 010573 253 ---------------MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPF 317 (507)
Q Consensus 253 ---------------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 317 (507)
...++.+.+.+.+++.|++++++++|++++.. .++.+|.||.|.|..+.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------------CGGGCSEEEECCGGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------------ccccCCEEEECCCCCch
Confidence 00345666777777779999998888776311 12568999999998775
No 345
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.03 E-value=0.0015 Score=69.69 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=66.4
Q ss_pred CCcEEEEC--CChHHHHHHHHHHHCCCcEEEEecCCCCCceeccccccchhhhhhhhHHHHHHHhhhhhCCcccCccccC
Q 010573 43 ENDVVVIG--GGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVD 120 (507)
Q Consensus 43 ~~dvvIIG--~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (507)
..+|+||| ||..|+.+|..|++.|.+|+|+++.+ +... ..+.. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~---------~~~~~------------------------~ 573 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANY---------MHFTL------------------------E 573 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHH---------HHHTT------------------------C
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccc---------ccccc------------------------c
Confidence 45899999 99999999999999999999999854 2110 00000 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEecCCEEEEEc--cCC-----------------ceEEEEeCeE
Q 010573 121 LPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFISPSEVSVDT--IEG-----------------GNTVVKGKNI 180 (507)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~d~~~~~v~~--~~g-----------------~~~~~~~d~l 180 (507)
...+.+.+++.||+++.+. +..+..+.+.+.. .++ +...+.+|.|
T Consensus 574 ---------------~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~V 638 (729)
T 1o94_A 574 ---------------YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSL 638 (729)
T ss_dssp ---------------HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEE
T ss_pred ---------------HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEE
Confidence 0112345667899998884 5666666655542 222 1234899999
Q ss_pred EEccCCCCC
Q 010573 181 IIATGSDVK 189 (507)
Q Consensus 181 vlAtG~~p~ 189 (507)
|+|+|..|.
T Consensus 639 v~a~G~~p~ 647 (729)
T 1o94_A 639 VLVTGRHSE 647 (729)
T ss_dssp EEESCEEEC
T ss_pred EECCCCCCC
Confidence 999998875
No 346
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.99 E-value=0.0075 Score=62.54 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=39.1
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEc-CCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLS-GDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.+.+++.||+++.++.++++..+ ++.+. +.+.+..++....+.++.||+|+|...
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 334455679999999999999875 45443 444433344445799999999999643
No 347
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.93 E-value=0.0059 Score=62.25 Aligned_cols=52 Identities=10% Similarity=0.153 Sum_probs=38.1
Q ss_pred HHHHHHhcCcEEEcCceEEEEEEcCCe--EEEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 261 FQRSLEKQKMKFMLKTKVVGVDLSGDG--VKLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 261 ~~~~l~~~Gv~i~~~~~v~~i~~~~~~--v~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
+.+.+++.|++++.+ +|++++.++++ +.+++. +++++.+|.||.|+|.....
T Consensus 179 L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~-----~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 179 LSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTK-----QHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEES-----SSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEEC-----CCCEEEcCEEEECCCcchHH
Confidence 344455679999999 89999875544 445543 34589999999999987654
No 348
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.91 E-value=0.0007 Score=69.02 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALG 79 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G 79 (507)
.||++|||+|++|+.+|.+|++.|.+|+|+|+....+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5899999999999999999999999999999976443
No 349
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.89 E-value=0.0083 Score=61.42 Aligned_cols=51 Identities=10% Similarity=0.142 Sum_probs=36.7
Q ss_pred HHHHHh-cCcEEEcCceEEEEEEcCCeE--EEEEeecCCCceEEEEcCEEEEeecCCCCC
Q 010573 262 QRSLEK-QKMKFMLKTKVVGVDLSGDGV--KLTLEPAAGGEKTILEADVVLVSAGRTPFT 318 (507)
Q Consensus 262 ~~~l~~-~Gv~i~~~~~v~~i~~~~~~v--~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 318 (507)
.+.+++ .|++++.+ +|++++.++++. .+++. ++.++.+|.||.|+|.....
T Consensus 182 ~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~-----~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 182 TEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITK-----QNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEES-----SSCEEECSEEEECSGGGCCC
T ss_pred HHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEEC-----CCCEEEcCEEEECCCcchHH
Confidence 344455 79999999 599997765443 44443 33469999999999997654
No 350
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.86 E-value=0.00061 Score=70.30 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRG 76 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 76 (507)
..||+||||||.||+.+|.+|++. +.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 79999999965
No 351
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.86 E-value=0.0081 Score=62.50 Aligned_cols=53 Identities=6% Similarity=0.081 Sum_probs=38.0
Q ss_pred HHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 264 SLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 264 ~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+++.||+++.++.++++..+++.+. +.+.+..++....+.++.||+|+|-..
T Consensus 164 ~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 164 RSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 33456899999999999987666554 444333344445799999999999654
No 352
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.85 E-value=0.00083 Score=68.47 Aligned_cols=37 Identities=38% Similarity=0.565 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
...||++|||+|++|+.+|.+|++.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4569999999999999999999999999999999643
No 353
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.83 E-value=0.0014 Score=66.80 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc-CCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 249 (507)
-.|+|||+|.+|+-+|..|++. |.+|++++.++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 3699999999999999999874 9999999988775
No 354
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.81 E-value=0.0045 Score=63.51 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=29.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
-.|+|||+|..|+-+|..+++ |.+|+++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 369999999999999999999 999999998754
No 355
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.70 E-value=0.0038 Score=62.47 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=29.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcC-CeeEEEcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLG-SEVTVVEF 245 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~ 245 (507)
.+|+|||+|..|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 356
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.69 E-value=0.015 Score=61.00 Aligned_cols=54 Identities=9% Similarity=0.051 Sum_probs=37.9
Q ss_pred HHHHhcCcEEEcCceEEEEEEcCCeEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 263 RSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 263 ~~l~~~Gv~i~~~~~v~~i~~~~~~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
+.+++.|++++.++.++++..+++.+. +.+.+..+|....+.++.||+|+|-..
T Consensus 166 ~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 166 NECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 344556899999999999976666543 444333344445799999999998543
No 357
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.62 E-value=0.00082 Score=69.19 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCcEEEEecCCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGAL 78 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~~ 78 (507)
.||+||||||.||+.+|.+|++ .+.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999996544
No 358
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.61 E-value=0.0067 Score=60.97 Aligned_cols=41 Identities=34% Similarity=0.401 Sum_probs=34.2
Q ss_pred cEEEcCceEEEEEEcCCeEEEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 270 MKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 270 v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
++++++++|++|+.+++++.|++. +++++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~-----~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELD-----NGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEES-----SSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEEC-----CCCEEECCEEEECCCHH
Confidence 589999999999988888887764 45679999999999743
No 359
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.53 E-value=0.0017 Score=67.43 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHH-CCCcEEEEecCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQ-LGLKTTCIEKRGA 77 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~ 77 (507)
..||++|||+|++|+.+|.+|++ .|.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 45899999999999999999999 7999999999653
No 360
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.43 E-value=0.0019 Score=66.46 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCcEEEEecCCCC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKRGAL 78 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~ 78 (507)
..||++|||+|++|+.+|.+|++. +.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 358999999999999999999998 8999999996543
No 361
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.31 E-value=0.024 Score=59.39 Aligned_cols=53 Identities=8% Similarity=0.056 Sum_probs=37.2
Q ss_pred HHHhc-Cc-EEEcCceEEEEEEcCC---eEE-EEEeecCCCceEEEEcCEEEEeecCCC
Q 010573 264 SLEKQ-KM-KFMLKTKVVGVDLSGD---GVK-LTLEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 264 ~l~~~-Gv-~i~~~~~v~~i~~~~~---~v~-v~~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
.+++. || +++.++.++++..+++ .+. +...+..++....+.++.||+|+|-..
T Consensus 160 ~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 160 AAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 33445 89 9999999999987655 554 443333344455799999999999654
No 362
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.05 E-value=0.0051 Score=56.54 Aligned_cols=34 Identities=21% Similarity=0.413 Sum_probs=31.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999987654
No 363
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.01 E-value=0.0074 Score=50.55 Aligned_cols=39 Identities=21% Similarity=0.315 Sum_probs=32.4
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
|+......+++|||+|..|...|..|.+.|++|+++|++
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 445555678999999999999999999999999999984
No 364
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.82 E-value=0.021 Score=59.79 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=28.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc------CCeeEEEccc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL------GSEVTVVEFA 246 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~------g~~Vtlv~~~ 246 (507)
-.|+|||+|..|+-+|..+++. |.+|+++++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3599999999999999999997 9999999874
No 365
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.73 E-value=0.012 Score=48.23 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
+.+++|+|+|.-|...|..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 358999999999999999999999999999983
No 366
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.68 E-value=0.017 Score=47.35 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+++|||.|..|...|..|.+.|++|+++|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999994
No 367
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.42 E-value=0.01 Score=60.31 Aligned_cols=35 Identities=31% Similarity=0.385 Sum_probs=31.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
|+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 68999999999999999999999999999998876
No 368
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.20 E-value=0.021 Score=46.49 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
++++|||+|..|...|..|.+.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999999999999999999999999983
No 369
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.96 E-value=0.034 Score=46.29 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.+++|+|+|..|...|..|.+.|++|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 57999999999999999999999999999983
No 370
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.90 E-value=0.028 Score=44.16 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-CcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLG-LKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~ 75 (507)
.+++|+|+|..|...+..|.+.| ++|++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 57999999999999999999999 899999983
No 371
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.63 E-value=0.029 Score=54.64 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=31.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4899999999999999999999999999998765
No 372
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.58 E-value=0.035 Score=45.33 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.+++|+|+|..|...|..|.+.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999983
No 373
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.05 E-value=0.042 Score=54.49 Aligned_cols=35 Identities=29% Similarity=0.445 Sum_probs=31.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
..++|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34689999999999999999999999999999876
No 374
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.96 E-value=0.047 Score=55.24 Aligned_cols=61 Identities=28% Similarity=0.398 Sum_probs=45.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCC-------C-----------HHHHHHHHHHHHhcCcEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSM-------D-----------GEIRKQFQRSLEKQKMKFM 273 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-------d-----------~~~~~~~~~~l~~~Gv~i~ 273 (507)
.+++|+|||+|.+|+.+|..|.+.|.+|+++++.+++.... + ......+.+.+++.|+++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 46789999999999999999999999999999887663211 0 0113456677777887653
No 375
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.92 E-value=0.055 Score=48.02 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
....|+|||||..|...|..|.+.|.+|+||+++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999873
No 376
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.67 E-value=0.04 Score=54.31 Aligned_cols=33 Identities=33% Similarity=0.416 Sum_probs=31.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 377
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.61 E-value=0.042 Score=52.28 Aligned_cols=77 Identities=16% Similarity=0.108 Sum_probs=56.1
Q ss_pred CCeEEEEcCcHHHHH-HHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEE
Q 010573 214 PKKLVVIGAGYIGLE-MGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~ 292 (507)
.+++.|||.|.+|+. +|..|.+.|.+|+..+..+. + . ..+.|++.|++++.+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~-----~-~----~~~~L~~~gi~v~~g~~~-------------- 59 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY-----P-P----MSTQLEALGIDVYEGFDA-------------- 59 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC-----T-T----HHHHHHHTTCEEEESCCG--------------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC-----c-H----HHHHHHhCCCEEECCCCH--------------
Confidence 578999999999996 88999999999999987653 1 1 234567789988754211
Q ss_pred eecCCCceEE-EEcCEEEEeecCCCCCCC
Q 010573 293 EPAAGGEKTI-LEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 293 ~~~~~g~~~~-i~~D~vi~a~G~~p~~~~ 320 (507)
+.-. ..+|.||.++|..|..+.
T Consensus 60 ------~~l~~~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 60 ------AQLDEFKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp ------GGGGSCCCSEEEECTTCCTTCHH
T ss_pred ------HHcCCCCCCEEEECCCcCCCCHH
Confidence 0000 147999999999887653
No 378
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.61 E-value=0.091 Score=43.71 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
..+++++|+|+|.+|..++..|.+.|.+|+++.+.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3468999999999999999999999999999987653
No 379
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.57 E-value=0.063 Score=51.80 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=30.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
++|+|||+|..|++.|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 380
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.49 E-value=0.083 Score=45.34 Aligned_cols=33 Identities=27% Similarity=0.224 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL-GLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~ 75 (507)
..+++|||+|..|...|..|.+. |++|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 45799999999999999999999 9999999983
No 381
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.37 E-value=0.068 Score=47.44 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
+++|||+|..|...|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999999999984
No 382
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.35 E-value=0.073 Score=51.16 Aligned_cols=34 Identities=41% Similarity=0.536 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3699999999999999999999999999999863
No 383
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.35 E-value=0.072 Score=52.68 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999987654
No 384
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=93.34 E-value=0.069 Score=52.66 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=32.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
..+|+|||+|+.|+.+|..+++.|.+|+++++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 357999999999999999999999999999987753
No 385
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.25 E-value=0.091 Score=50.84 Aligned_cols=37 Identities=35% Similarity=0.724 Sum_probs=33.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc-Ccc
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA-ADI 249 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~ 249 (507)
.+.+|+|||+|..|+-+|..|.+.|.+|++++++ +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3678999999999999999999999999999988 554
No 386
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.24 E-value=0.05 Score=54.31 Aligned_cols=80 Identities=20% Similarity=0.147 Sum_probs=57.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEEE
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTL 292 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~~ 292 (507)
.++++.|||.|.+|+-+|..|.+.|.+|+..+..+... + ...+.|++.|++++.+.....
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~---~-----~~~~~L~~~gi~~~~g~~~~~------------ 67 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE---N-----PTAQSLLEEGIKVVCGSHPLE------------ 67 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG---C-----HHHHHHHHTTCEEEESCCCGG------------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC---C-----hHHHHHHhCCCEEEECCChHH------------
Confidence 37899999999999999999999999999998765211 1 123467778999876533100
Q ss_pred eecCCCceEEEE-cCEEEEeecCCCCCCC
Q 010573 293 EPAAGGEKTILE-ADVVLVSAGRTPFTAG 320 (507)
Q Consensus 293 ~~~~~g~~~~i~-~D~vi~a~G~~p~~~~ 320 (507)
..-. +|.||+++|..|+.+.
T Consensus 68 --------~~~~~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 68 --------LLDEDFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp --------GGGSCEEEEEECTTSCTTSHH
T ss_pred --------hhcCCCCEEEECCcCCCCChh
Confidence 0011 6899999999887653
No 387
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.22 E-value=0.2 Score=40.75 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=31.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
..++++|+|.|..|..++..|.+.|.+|+++++.+
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35789999999999999999999999999998754
No 388
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.18 E-value=0.079 Score=53.19 Aligned_cols=35 Identities=29% Similarity=0.462 Sum_probs=32.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCC--eeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGS--EVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~ 249 (507)
++|+|||+|.+|+-+|..|++.|. +|+++++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 579999999999999999999999 99999987765
No 389
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.04 E-value=0.058 Score=49.49 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
....|+|||||..|...|..|.+.|++|+||+++
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3468999999999999999999999999999984
No 390
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.02 E-value=0.098 Score=50.74 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|+|||+|.+|+.+|..|+..|.+|+++|++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 458999999999999999999999999999984
No 391
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.01 E-value=0.087 Score=51.32 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=31.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 6999999999999999999999999999998754
No 392
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.01 E-value=0.083 Score=51.20 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=30.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999864
No 393
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.00 E-value=0.11 Score=51.93 Aligned_cols=33 Identities=30% Similarity=0.346 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|+|||.|.+|+++|..|+++|++|++.|++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999999999999984
No 394
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.97 E-value=0.083 Score=51.58 Aligned_cols=33 Identities=33% Similarity=0.399 Sum_probs=30.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
.|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 699999999999999999999999999998754
No 395
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.96 E-value=0.11 Score=48.25 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|.|||+|.-|...|..+++.|++|+++|++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 458999999999999999999999999999984
No 396
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.93 E-value=0.065 Score=53.25 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
.+|+|||.|.+|+++|..|+++|++|+++|...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 579999999999999999999999999999854
No 397
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.91 E-value=0.092 Score=51.80 Aligned_cols=36 Identities=28% Similarity=0.529 Sum_probs=33.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 249 (507)
..+|+|||+|..|+-+|..|++.| .+|+++++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 468999999999999999999999 899999988765
No 398
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.80 E-value=0.071 Score=51.47 Aligned_cols=33 Identities=27% Similarity=0.469 Sum_probs=30.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 699999999999999999999999999998753
No 399
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.78 E-value=0.31 Score=43.15 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEEE
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLT 291 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v~ 291 (507)
-.+++++|||+|.+|...+..|.+.|.+|+++.+. ..+++ .+..++.+++++...-
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~------~~~~l----~~l~~~~~i~~i~~~~-------------- 84 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT------VSAEI----NEWEAKGQLRVKRKKV-------------- 84 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS------CCHHH----HHHHHTTSCEEECSCC--------------
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC------CCHHH----HHHHHcCCcEEEECCC--------------
Confidence 34799999999999999999999999999999753 34443 3333455666542210
Q ss_pred EeecCCCceEEEEcCEEEEeecCCC
Q 010573 292 LEPAAGGEKTILEADVVLVSAGRTP 316 (507)
Q Consensus 292 ~~~~~~g~~~~i~~D~vi~a~G~~p 316 (507)
. ...--.+|+||.|||...
T Consensus 85 -~-----~~dL~~adLVIaAT~d~~ 103 (223)
T 3dfz_A 85 -G-----EEDLLNVFFIVVATNDQA 103 (223)
T ss_dssp -C-----GGGSSSCSEEEECCCCTH
T ss_pred -C-----HhHhCCCCEEEECCCCHH
Confidence 0 001123899999988654
No 400
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.72 E-value=0.096 Score=50.89 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=31.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3699999999999999999999999999998653
No 401
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.72 E-value=0.12 Score=52.04 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=33.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 568999999999999999999999999999988765
No 402
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.65 E-value=0.094 Score=52.35 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=33.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIV 250 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 250 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 469999999999999999999999999999998763
No 403
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.61 E-value=0.1 Score=53.07 Aligned_cols=35 Identities=34% Similarity=0.571 Sum_probs=32.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 249 (507)
.+|+|||+|..|+-+|..|.+.| .+|++++.++++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 57999999999999999999999 999999987754
No 404
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.51 E-value=0.1 Score=50.11 Aligned_cols=34 Identities=38% Similarity=0.527 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
.+.+|||+|||.||+.+|..|...|. +|+++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45689999999999999999999998 99999995
No 405
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.43 E-value=0.1 Score=50.61 Aligned_cols=33 Identities=39% Similarity=0.633 Sum_probs=30.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999874
No 406
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.42 E-value=0.11 Score=52.96 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=32.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 57999999999999999999999999999987765
No 407
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.40 E-value=0.12 Score=49.84 Aligned_cols=32 Identities=38% Similarity=0.616 Sum_probs=30.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
.+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 57999999999999999999999999999975
No 408
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.08 E-value=0.16 Score=48.17 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHH-HHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYV-AAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~-aA~~l~~~g~~V~lie~~ 75 (507)
+.++.|||.|.+|++ +|..|+++|++|++.|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 458999999999997 788899999999999984
No 409
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.08 E-value=0.14 Score=48.10 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|.|||+|.-|...|..++..|++|+|+|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 357999999999999999999999999999984
No 410
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.05 E-value=0.14 Score=49.85 Aligned_cols=35 Identities=31% Similarity=0.648 Sum_probs=32.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.+++|||+|.+|+-+|..|.+.|.+|+++++++++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 47999999999999999999999999999987655
No 411
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.03 E-value=0.13 Score=51.67 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 568999999999999999999999999999988765
No 412
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.99 E-value=0.11 Score=49.85 Aligned_cols=33 Identities=36% Similarity=0.467 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|+|||+|..|+.+|..|+..|.+|+++|++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 458999999999999999999999999999984
No 413
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.98 E-value=0.12 Score=50.04 Aligned_cols=35 Identities=31% Similarity=0.366 Sum_probs=31.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.++|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 578999999999999999999 59999999988644
No 414
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.91 E-value=0.18 Score=47.67 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
..+|.|||+|..|...|..|+..|+ +|+|+|.+
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4689999999999999999999998 99999974
No 415
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.86 E-value=0.24 Score=49.99 Aligned_cols=42 Identities=38% Similarity=0.567 Sum_probs=39.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceecc
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLN 84 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 84 (507)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t 80 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWS 80 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCccee
Confidence 389999999999999999999999999999999999997643
No 416
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.77 E-value=0.14 Score=49.05 Aligned_cols=34 Identities=29% Similarity=0.501 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
...+|+|+|+|.+|..+|..|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999999998 79999995
No 417
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=91.73 E-value=0.16 Score=49.46 Aligned_cols=36 Identities=25% Similarity=0.431 Sum_probs=32.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
..+++|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 357999999999999999999999999999987664
No 418
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.73 E-value=0.15 Score=50.66 Aligned_cols=58 Identities=19% Similarity=0.349 Sum_probs=43.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCccCCC-----------------CCHHHHHHHHHHHHhcCcEEE
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-----------------MDGEIRKQFQRSLEKQKMKFM 273 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----------------~d~~~~~~~~~~l~~~Gv~i~ 273 (507)
.+|+|||+|..|+-+|..|.+.|.+|+++++.+++... +... ...+.+.+++.|++..
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~~g~~~~ 80 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD-QTALISLLDELGLKTF 80 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT-CHHHHHHHHHTTCCEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCc-cHHHHHHHHHcCCccc
Confidence 47999999999999999999999999999988765211 1111 2345566777888754
No 419
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.72 E-value=0.16 Score=47.96 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
.++|.|||+|..|.+.|..|++.|+ +|+++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999998 99999984
No 420
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.71 E-value=0.13 Score=50.13 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=30.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHh-cC-CeeEEEcccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWAR-LG-SEVTVVEFAA 247 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~-~g-~~Vtlv~~~~ 247 (507)
.+|+|||+|..|+-+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999876
No 421
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.69 E-value=0.16 Score=51.28 Aligned_cols=36 Identities=36% Similarity=0.426 Sum_probs=33.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 468999999999999999999999999999998775
No 422
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.68 E-value=0.085 Score=52.69 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
.++++|+|+|-.|...|..|.+.|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3689999999999999999999999999999854
No 423
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.63 E-value=0.11 Score=53.19 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh---cCCeeEEEcccC
Q 010573 214 PKKLVVIGAGYIGLEMGSVWAR---LGSEVTVVEFAA 247 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~ 247 (507)
..+|+|||||..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 899999999865
No 424
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.62 E-value=0.18 Score=48.62 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
|.+|+|||||.-|..+|..+++.|++|+++|.++
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3579999999999999999999999999999865
No 425
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.59 E-value=0.16 Score=48.73 Aligned_cols=31 Identities=26% Similarity=0.247 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
++|.|||+|..|...|..|++.|++|+++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 5899999999999999999999999999988
No 426
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.46 E-value=0.18 Score=47.87 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
++|.|||+|..|.+.|..|++.|+ +|+|+|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998 99999984
No 427
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.38 E-value=0.18 Score=47.55 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~ 75 (507)
++|+|||+|..|...|..|++.|+ +|+++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999999998 99999983
No 428
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.30 E-value=0.16 Score=50.29 Aligned_cols=35 Identities=31% Similarity=0.361 Sum_probs=31.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCC-eeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGS-EVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 249 (507)
.+|+|||+|..|+-+|..|++.|. +|+++++.+..
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 479999999999999999999999 99999987653
No 429
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.25 E-value=0.19 Score=47.50 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
++|.|||+|.-|.+.|..|++.|++|+++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5899999999999999999999999999998
No 430
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.22 E-value=0.21 Score=47.60 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
++|.|||+|.-|.+.|..|++.|++|+++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEC
Confidence 5899999999999999999999999999987
No 431
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.18 E-value=0.2 Score=47.28 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|.|||+|.-|.+.|..+++.|++|+++|++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 458999999999999999999999999999984
No 432
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.17 E-value=0.16 Score=48.06 Aligned_cols=64 Identities=19% Similarity=0.245 Sum_probs=44.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHh--cCCeeEEEcccCccCCC-------CC-HHHHHHHHHHHHhcCcEEEcCce
Q 010573 214 PKKLVVIGAGYIGLEMGSVWAR--LGSEVTVVEFAADIVPS-------MD-GEIRKQFQRSLEKQKMKFMLKTK 277 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~~~-------~d-~~~~~~~~~~l~~~Gv~i~~~~~ 277 (507)
...|+|||+|+.|+-+|..|++ .|.+|+++++.+.+... ++ ..+...+.+.+++.|+++..+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~ 138 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGD 138 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCc
Confidence 4579999999999999999964 69999999987764210 11 11122334556677888776543
No 433
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=91.09 E-value=0.17 Score=49.60 Aligned_cols=35 Identities=31% Similarity=0.480 Sum_probs=31.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhc-CCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARL-GSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 249 (507)
.+++|||+|..|+-+|..|++. |.+|+++++++++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 5799999999999999999998 9999999987654
No 434
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.06 E-value=0.15 Score=48.83 Aligned_cols=32 Identities=31% Similarity=0.342 Sum_probs=29.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcC------CeeEEEcccC
Q 010573 216 KLVVIGAGYIGLEMGSVWARLG------SEVTVVEFAA 247 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g------~~Vtlv~~~~ 247 (507)
+|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999764
No 435
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=91.04 E-value=0.2 Score=48.42 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=31.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 216 KLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 216 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
+++|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987654
No 436
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.96 E-value=0.25 Score=46.85 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
.+|.|||+|..|...|..|++.|+ +|+|+|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998 99999984
No 437
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.94 E-value=0.26 Score=40.72 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=30.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999875
No 438
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.93 E-value=0.21 Score=48.84 Aligned_cols=33 Identities=33% Similarity=0.469 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|+|||+|.+|+.+|..|+..|.+|+++|++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 357999999999999999999999999999984
No 439
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.90 E-value=0.21 Score=47.05 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
+++.|||+|.-|.+.|..|++.|++|+++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLR 33 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 4799999999999999999999999999998
No 440
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.87 E-value=0.2 Score=52.87 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=32.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 68999999999999999999999999999986543
No 441
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.87 E-value=0.19 Score=53.09 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=32.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 368999999999999999999999999999986543
No 442
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.85 E-value=0.26 Score=43.29 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 77 (507)
.+++.|||+|.-|.+.|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998643
No 443
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.79 E-value=0.21 Score=50.10 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=32.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcC--CeeEEEcccCcc
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLG--SEVTVVEFAADI 249 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~ 249 (507)
.+|+|||+|.+|+-+|..|.+.| .+|+++++.+++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 57999999999999999999999 999999987654
No 444
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.78 E-value=0.23 Score=48.90 Aligned_cols=39 Identities=26% Similarity=0.274 Sum_probs=33.9
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.+..+.+.++.|||.|..|+..|..+++.|++|+.+|-+
T Consensus 15 ~p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 15 VPRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 344455678999999999999999999999999999974
No 445
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.78 E-value=0.22 Score=40.50 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=30.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.++++|+|+|.+|..++..|.+.|.+|+++++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3689999999999999999999999999998753
No 446
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.78 E-value=0.25 Score=48.04 Aligned_cols=33 Identities=30% Similarity=0.398 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|+|||+|.+|+.++..|+..|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 458999999999999999999999999999984
No 447
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.74 E-value=0.22 Score=46.78 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
++|.|||+|.-|...|..|++.|++|+++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEEC
Confidence 4799999999999999999999999999998
No 448
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.68 E-value=0.27 Score=45.93 Aligned_cols=32 Identities=34% Similarity=0.405 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.+|.|||+|.-|...|..|++.|++|+++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999999999999999999999999984
No 449
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.63 E-value=0.25 Score=45.68 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
+|.|||+|.-|...|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999853
No 450
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.61 E-value=0.26 Score=46.30 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=32.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
...+++|.|||.|.-|...|..|++.|++|+++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 345578999999999999999999999999999984
No 451
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.44 E-value=0.24 Score=47.66 Aligned_cols=32 Identities=34% Similarity=0.476 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.+|+|+|+|.+|..++..|+..|.+|+++|++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999983
No 452
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.27 E-value=0.29 Score=39.38 Aligned_cols=33 Identities=12% Similarity=0.467 Sum_probs=29.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 215 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 215 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.+++|+|+|.+|..++..|.+.|.+|+++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999997643
No 453
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.20 E-value=0.24 Score=38.54 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=30.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccC
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAA 247 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~ 247 (507)
.++++|+|+|.+|..++..|.+.| .+|+++.|.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8898887753
No 454
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.14 E-value=0.23 Score=51.18 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=31.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4579999999999999999999999999999865
No 455
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.08 E-value=0.29 Score=51.37 Aligned_cols=36 Identities=28% Similarity=0.473 Sum_probs=32.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 213 VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 213 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
..++|+|||+|..|+.+|..|.+.|.+|+++++.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 367999999999999999999999999999998754
No 456
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.07 E-value=0.34 Score=44.26 Aligned_cols=33 Identities=15% Similarity=0.389 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+++|||+|-+|.++|..|++.|.+|+|++|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999999984
No 457
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.06 E-value=0.23 Score=45.02 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
.+|+|||+|..|..+|..|++.|. +++|+|++
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 579999999999999999999997 89999984
No 458
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.93 E-value=0.14 Score=41.92 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
..+++|||+|..|...|..|++.|.+|+++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcC
Confidence 35799999999999999999999999999998
No 459
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=89.91 E-value=0.3 Score=52.59 Aligned_cols=36 Identities=28% Similarity=0.517 Sum_probs=32.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 249 (507)
.++|+|||+|..|+.+|..|.+.|.+|+++++.+++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 579999999999999999999999999999977643
No 460
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.90 E-value=0.41 Score=44.82 Aligned_cols=35 Identities=31% Similarity=0.287 Sum_probs=31.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 41 SDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 41 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
....+|.|||.|.-|...|..|++.|++|+++|++
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34568999999999999999999999999999983
No 461
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.82 E-value=0.36 Score=45.56 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
..+|.|||+|..|.+.|..|+..|+ +++|+|.+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4689999999999999999999988 99999984
No 462
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=89.78 E-value=0.35 Score=47.83 Aligned_cols=46 Identities=22% Similarity=0.338 Sum_probs=41.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecCCCCCceeccc
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNV 85 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 85 (507)
|...+||+|||+|++|+++|..|++.|++|+|+|+++.+||.|...
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 4456899999999999999999999999999999999999987543
No 463
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.76 E-value=0.3 Score=44.76 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 212 EVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
-.+++|+|||+|.+|...+..|.+.|.+|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 347899999999999999999999999999997643
No 464
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=89.75 E-value=0.45 Score=47.44 Aligned_cols=56 Identities=23% Similarity=0.305 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCceEEEEEE-cCCeE-EEEEeecCCCceEEEEcCEEEEeecCC
Q 010573 255 GEIRKQFQRSLEKQKMKFMLKTKVVGVDL-SGDGV-KLTLEPAAGGEKTILEADVVLVSAGRT 315 (507)
Q Consensus 255 ~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~-~~~~v-~v~~~~~~~g~~~~i~~D~vi~a~G~~ 315 (507)
.++.+.+.+.+++.|++++++++|++|.. +++.+ .|++. +++++.||.||.+.+..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~-----~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSS-----DGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEET-----TSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEEC-----CCcEEECCEEEECCCcc
Confidence 47888899999999999999999999987 44544 35553 45689999999999988
No 465
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.74 E-value=0.29 Score=45.68 Aligned_cols=34 Identities=21% Similarity=0.079 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
.++|.|||.|.-|...|..|++.|++|+++|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999853
No 466
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.62 E-value=0.33 Score=45.43 Aligned_cols=33 Identities=27% Similarity=0.254 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.++|.|||.|.-|...|..|++.|++|+++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 358999999999999999999999999999983
No 467
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.61 E-value=0.28 Score=48.90 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CC-cEEEEecCCC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQL-GL-KTTCIEKRGA 77 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~-g~-~V~lie~~~~ 77 (507)
.++|.|||+|.-|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999998643
No 468
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.53 E-value=0.31 Score=48.80 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.++|.|||.|.-|+..|..|++.|++|+++|++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999999999999999999999999984
No 469
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.46 E-value=0.37 Score=47.23 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.+|+|||.|..|...|..|.+.|++|++||++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 57999999999999999999999999999984
No 470
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.39 E-value=0.34 Score=45.37 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKR 75 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~ 75 (507)
+|+|||+|..|.+.|..|+..|+ +|+|+|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 69999999999999999999998 99999983
No 471
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=89.28 E-value=0.3 Score=50.09 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=31.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccC
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAA 247 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 247 (507)
.-.|+|||||..|+-+|..+++.|.+|+++++.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3579999999999999999999999999999874
No 472
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=89.26 E-value=0.34 Score=48.79 Aligned_cols=77 Identities=18% Similarity=0.309 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCcHHHHH-HHHHHHhcCCeeEEEcccCccCCCCCHHHHHHHHHHHHhcCcEEEcCceEEEEEEcCCeEEE
Q 010573 212 EVPKKLVVIGAGYIGLE-MGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKL 290 (507)
Q Consensus 212 ~~~~~vvVvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~v~v 290 (507)
...+++.|||-|-+|+- +|..|.+.|.+|+..+..+. + ..+.|++.|+++..+....
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~------~-----~~~~l~~~gi~~~~g~~~~----------- 77 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN------S-----VTQHLTALGAQIYFHHRPE----------- 77 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC------H-----HHHHHHHTTCEEESSCCGG-----------
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC------H-----HHHHHHHCCCEEECCCCHH-----------
Confidence 34689999999999996 89999999999999876531 1 2345778899987652110
Q ss_pred EEeecCCCceEEEEcCEEEEeecCCCCCCC
Q 010573 291 TLEPAAGGEKTILEADVVLVSAGRTPFTAG 320 (507)
Q Consensus 291 ~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 320 (507)
....+|.||.++|..|..+.
T Consensus 78 ----------~~~~~d~vV~Spgi~~~~p~ 97 (494)
T 4hv4_A 78 ----------NVLDASVVVVSTAISADNPE 97 (494)
T ss_dssp ----------GGTTCSEEEECTTSCTTCHH
T ss_pred ----------HcCCCCEEEECCCCCCCCHH
Confidence 01137999999999876643
No 473
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.20 E-value=0.44 Score=42.02 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
++++.|||+|..|...|..|.+.|++|.+++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358999999999999999999999999999983
No 474
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.19 E-value=0.33 Score=39.29 Aligned_cols=33 Identities=33% Similarity=0.499 Sum_probs=30.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEccc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFA 246 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 246 (507)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999999999999999998764
No 475
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.17 E-value=0.4 Score=44.03 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
...++|+|+|-+|.++|..|++.|.+|+++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R 150 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNR 150 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEEC
Confidence 45799999999999999999999999999988
No 476
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.14 E-value=0.33 Score=48.37 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|+|||+|..|...+..|.+.|.+|+|++++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 468999999999999999999999999999984
No 477
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.12 E-value=0.28 Score=45.68 Aligned_cols=32 Identities=31% Similarity=0.279 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
+++.|||+|.-|.+.|..|++.|++|++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 47999999999999999999999999999984
No 478
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.10 E-value=0.37 Score=46.21 Aligned_cols=36 Identities=14% Similarity=0.064 Sum_probs=31.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
|...++|.|||.|.-|...|..|++.|++|+++|++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 445578999999999999999999999999999983
No 479
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.03 E-value=0.15 Score=45.62 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=29.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
...+++|+|+|..|...|..|.+.|+ |+++|++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 34589999999999999999999999 9999984
No 480
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.92 E-value=0.42 Score=46.09 Aligned_cols=32 Identities=34% Similarity=0.501 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..|+|+|+|..|..+|..|+..|.+|+++|++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 57999999999999999999999999999983
No 481
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=88.83 E-value=0.37 Score=48.49 Aligned_cols=36 Identities=31% Similarity=0.407 Sum_probs=32.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC-CeeEEEcccCcc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLG-SEVTVVEFAADI 249 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 249 (507)
..+++|||+|..|+-+|..|.+.| .+|+++++.+++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 467999999999999999999998 799999988764
No 482
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.71 E-value=0.45 Score=45.61 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
.++|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999983
No 483
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.65 E-value=0.44 Score=42.49 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCcEEEEecC
Q 010573 42 DENDVVVIGG-GPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~-G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+.++|.|| |.-|...+.+|.+.|++|++++++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 3568999998 999999999999999999999984
No 484
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.57 E-value=0.25 Score=46.39 Aligned_cols=35 Identities=17% Similarity=0.429 Sum_probs=31.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
.++|.|||+|..|.-+|..++..|.+|++++..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999987653
No 485
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=88.47 E-value=0.38 Score=47.07 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=31.9
Q ss_pred cCCCCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEe
Q 010573 37 FASASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIE 73 (507)
Q Consensus 37 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie 73 (507)
+.+|+...+|+|+|+|..|...+..+++.|++|.++|
T Consensus 18 ~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp ---CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred eccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 5556667899999999999999999999999999999
No 486
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.46 E-value=0.5 Score=44.33 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-cEEEEec
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEK 74 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~ 74 (507)
...+|.|||+|..|.+.|..|+..|+ +|+|+|.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~ 40 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDI 40 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEec
Confidence 34689999999999999999999999 9999998
No 487
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.41 E-value=0.4 Score=47.58 Aligned_cols=32 Identities=38% Similarity=0.559 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
++|.|||.|..|+..|..|++.|++|+++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 48999999999999999999999999999984
No 488
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.40 E-value=0.32 Score=45.72 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=30.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~ 75 (507)
.+++|.|||.|.-|...|..|++.|+ +|+++|++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35689999999999999999999999 99999983
No 489
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.39 E-value=1.2 Score=41.90 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=32.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCeeEEEcccCc
Q 010573 214 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAAD 248 (507)
Q Consensus 214 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 248 (507)
++++.|||-|.+|-.+|..+..+|.+|+.+.+.+.
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 174 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGR 174 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChH
Confidence 78999999999999999999999999999887653
No 490
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.36 E-value=0.51 Score=42.55 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..++|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3568999999999999999999999999999984
No 491
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.34 E-value=0.47 Score=44.67 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL--KTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~ 75 (507)
.++|.|||+|..|.+.|..|+..+. ++.|+|.+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999987 89999984
No 492
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.28 E-value=0.36 Score=48.24 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=30.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCcEEEEecC
Q 010573 42 DENDVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKR 75 (507)
Q Consensus 42 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~ 75 (507)
.+++|.|||.|..|...|..|++. |++|+++|++
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 346899999999999999999998 8999999984
No 493
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.27 E-value=0.5 Score=45.73 Aligned_cols=33 Identities=42% Similarity=0.612 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
...|+|||+|..|..+|..++..|.+|+++|++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 458999999999999999999999999999983
No 494
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.26 E-value=0.36 Score=42.73 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=30.2
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGG-GPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~-G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
+++|+|.|| |..|...+..|.+.|++|.+++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 468999996 899999999999999999999984
No 495
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.24 E-value=0.44 Score=44.36 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 74 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 74 (507)
.++|.|||+|.-|...|..|.+.|++|+++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999999999999999999999999988
No 496
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.24 E-value=0.6 Score=42.99 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCcEEEEecCC
Q 010573 44 NDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRG 76 (507)
Q Consensus 44 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 76 (507)
++|+|.|+|.-|...+..|.+.|++|++++++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 579999999999999999999999999999853
No 497
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=88.14 E-value=0.59 Score=43.92 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
..+|.|||+|.-|...|..|.+.|++|++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999999999999984
No 498
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=88.01 E-value=0.44 Score=46.78 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=30.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 010573 40 ASDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKR 75 (507)
Q Consensus 40 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 75 (507)
....++|.|||.|.-|+..|..|++ |++|+++|++
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred ccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 3445689999999999999999998 9999999984
No 499
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.00 E-value=0.5 Score=44.32 Aligned_cols=31 Identities=23% Similarity=0.334 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHC--CCcEEEEecC
Q 010573 45 DVVVIGGGPGGYVAAIKAAQL--GLKTTCIEKR 75 (507)
Q Consensus 45 dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~ 75 (507)
+|.|||+|..|.+.|..|++. +++|+++|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 699999999999999999985 7899999985
No 500
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.97 E-value=0.49 Score=44.07 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=29.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-cEEEEec
Q 010573 43 ENDVVVIGGGPGGYVAAIKAAQLGL-KTTCIEK 74 (507)
Q Consensus 43 ~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~ 74 (507)
..+++|||+|.+|.++|..|++.|. +|++++|
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR 173 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANR 173 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 4579999999999999999999997 8999988
Done!