BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010575
(507 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/506 (70%), Positives = 430/506 (84%), Gaps = 2/506 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ RGLDQ+N LLSRFI++CSSLGFS Y++SIFTHK++PD+YLYNT IKAL + A
Sbjct: 64 MLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEA 123
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++LYN+I AS LR D YS PFVLKAVV+L I +GR+IHCQ +GTGL SD+HVV ALIQM
Sbjct: 124 ILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQM 183
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+SC C+ +AR++FD + R +VA WN MVAGYAKVGD++NAR LFE M E+NVISWT
Sbjct: 184 YSSCGCVSEARQLFDGVCFR--DVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTA 241
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+IAGYAQMD+PNEAIT+FRRMQ+E V+PDEIAMLAALSACA LGA+ELGEWIHNYI+++G
Sbjct: 242 VIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHG 301
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L+ IVPLNNALIDMYAK GKI KAL+VF+NM++KSVITWT+MI GLALHGLGREAL+MFS
Sbjct: 302 LSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFS 361
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
MER R+KPNEITF+AILSACCHVGLVE+GR YF M ++YGI+PKI+ YGCMIDLLGRA
Sbjct: 362 CMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRA 421
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G+LQEA++L+R MPFEANA IWGSLLAA+ I+GD ELG+ ALQHLIK+EPHNSGNY +LS
Sbjct: 422 GFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLS 481
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
NIYA +WNE+G +RKVMRD GVKKMPG S IEV+ RVHEFVAGD HP +R++++LC
Sbjct: 482 NIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVAGDKLHPQSERIFEVLC 541
Query: 481 KINGQMKFAEHLQNEFSGVLESDVAS 506
KIN Q K A ++Q E +LES+ S
Sbjct: 542 KINLQSKIAMYVQKEHVEMLESNKES 567
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 168/387 (43%), Gaps = 76/387 (19%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L + + S ++ + HC + GLD D +++ I+ +S
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSS------------------ 85
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+G + + ++F T ++ + T+I + + EAI L+ R+
Sbjct: 86 ---------------LGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRI 130
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------- 254
+++ D ++ L A +L A+ +G IH GL + + + ALI M
Sbjct: 131 LASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCV 190
Query: 255 ------------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
YAK G + A +FE M ++VI+WT +IAG A
Sbjct: 191 SEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMD 250
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EA+ MF RM+ V+P+EI +A LSAC H+G +ELG N + ++G+ +
Sbjct: 251 RPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHGLSKIVPLN 309
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG----DVELGECALQHLI 406
+ID+ + G +++A ++ + M ++ W S++ ++G +E+ C ++ I
Sbjct: 310 NALIDMYAKCGKIEKALEVFKNMEHKS-VITWTSMIDGLALHGLGREALEMFSCMERNRI 368
Query: 407 KLEPHNSGNYAILSNIYAI----LGRW 429
K P+ AILS + +GRW
Sbjct: 369 K--PNEITFVAILSACCHVGLVEMGRW 393
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+L+ L C+ L + H ++ GL+ L + I+ + G + +F +
Sbjct: 44 LLSLLKQCSNLKHLH---QTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKT 100
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+ + T+I L+ L EA+ +++R+ + ++ + + +L A + + +GR+
Sbjct: 101 RPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQ 160
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+ G+ I +I + G + EA +L + F + A W +++A
Sbjct: 161 -IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFR-DVAFWNAMVAGYAKV 218
Query: 393 GDVELGECALQHLIKLEPH-NSGNYAILSNIYAILGRWNESGKIRKVMR 440
GDV+ +HL + P N ++ + YA + R NE+ + + M+
Sbjct: 219 GDVDNA----RHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQ 263
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/506 (70%), Positives = 430/506 (84%), Gaps = 2/506 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ RGLDQ+N LLSRFI++CSSLGFS Y++SIFTHK++PD+YLYNT IKAL + A
Sbjct: 64 MLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEA 123
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++LYN+I AS LR D YS PFVLKAVV+L I +GR+IHCQ +GTGL SD+HVV ALIQM
Sbjct: 124 ILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQM 183
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+SC C+ +AR++FD + R +VA WN MVAGYAKVGD++NAR LFE M E+NVISWT
Sbjct: 184 YSSCGCVSEARQLFDGVCFR--DVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTA 241
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+IAGYAQMD+PNEAIT+FRRMQ+E V+PDEIAMLAALSACA LGA+ELGEWIHNYI+++G
Sbjct: 242 VIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHG 301
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L+ IVPLNNALIDMYAK GKI KAL+VF+NM++KSVITWT+MI GLALHGLGREAL+MFS
Sbjct: 302 LSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFS 361
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
MER R+KPNEITF+AILSACCHVGLVE+GR YF M ++YGI+PKI+ YGCMIDLLGRA
Sbjct: 362 CMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRA 421
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G+LQEA++L+R MPFEANA IWGSLLAA+ I+GD ELG+ ALQHLIK+EPHNSGNY +LS
Sbjct: 422 GFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLS 481
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
NIYA +WNE+G +RKVMRD GVKKMPG S IEV+ RVHEFVAGD HP +R++++LC
Sbjct: 482 NIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVAGDKLHPQSERIFEVLC 541
Query: 481 KINGQMKFAEHLQNEFSGVLESDVAS 506
KJN Q K A ++Q E +LES+ S
Sbjct: 542 KJNLQSKIAMYVQKEHVEMLESNKES 567
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 168/387 (43%), Gaps = 76/387 (19%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L + + S ++ + HC + GLD D +++ I+ +S
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSS------------------ 85
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+G + + ++F T ++ + T+I + + EAI L+ R+
Sbjct: 86 ---------------LGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRI 130
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM------- 254
+++ D ++ L A +L A+ +G IH GL + + + ALI M
Sbjct: 131 LASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCV 190
Query: 255 ------------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
YAK G + A +FE M ++VI+WT +IAG A
Sbjct: 191 SEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMD 250
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EA+ MF RM+ V+P+EI +A LSAC H+G +ELG N + ++G+ +
Sbjct: 251 RPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHGLSKIVPLN 309
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG----DVELGECALQHLI 406
+ID+ + G +++A ++ + M ++ W S++ ++G +E+ C ++ I
Sbjct: 310 NALIDMYAKCGKIEKALEVFKNMEHKS-VITWTSMIDGLALHGLGREALEMFSCMERNRI 368
Query: 407 KLEPHNSGNYAILSNIYAI----LGRW 429
K P+ AILS + +GRW
Sbjct: 369 K--PNEITFVAILSACCHVGLVEMGRW 393
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/506 (66%), Positives = 406/506 (80%), Gaps = 5/506 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSK-PDVYLYNTTIKALCQT-DNPL 58
M++R LD +N LLSRFI +CSSLGF YAYS+FT + PD+YLYN IKAL + +P
Sbjct: 1 MLLRALDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPK 60
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ LYN IQ + LRPD+YSFPF LKAV + S+I+ GR++H Q++ GL SD+HV+ A +
Sbjct: 61 ASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFV 120
Query: 119 QMYAS--CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
QMY+S CI DARK+FD +S+ +VA+WN M+ GYAK GDL NAR LFE M ++NVI
Sbjct: 121 QMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVI 180
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SWT LI GYAQ ++P++AI LFRRMQ+ENV+PDEIAML AL+ACA+LGA+ELGEWI +YI
Sbjct: 181 SWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYI 240
Query: 237 EQYGL-NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ GL T +PLNNALIDMYAKSG I ALQVFENM +K++ITWTTMIAGLALHGLG EA
Sbjct: 241 DRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEA 300
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L+MFSRMERARVKPN+ITFIAILSAC HVGLV+ GR YFN M SRYGIEPKIE YGCMID
Sbjct: 301 LEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMID 360
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG+L+EA+ LL +MPFE NA IWGSLLAA N +GD ELGE ALQHL++LEP NSGN
Sbjct: 361 LLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGN 420
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
YA+LSNIYA GRWNES +RKVM D GVKKMPG S IEV+ RVHEF+AG+ SH FDR+
Sbjct: 421 YALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQFDRI 480
Query: 476 YQILCKINGQMKFAEHLQNEFSGVLE 501
++L KIN Q+ ++H + E +LE
Sbjct: 481 QEVLSKINRQLGLSQHFEKESGALLE 506
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/501 (64%), Positives = 402/501 (80%), Gaps = 2/501 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ R LDQ+N LS+FID+C+SLG S YA+SIF++K+ PD+ LYNT IKAL +T +P+NA
Sbjct: 47 MLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINA 106
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY +I+ LRPD+YS P VLKAVVKLS +E+GR+IH QTV + LD DV+V +LIQM
Sbjct: 107 IWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQM 166
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+SC + DARK+FD + + +VA+WN MVAGY KVG+L +AR +F M ++NVISWTT
Sbjct: 167 YSSCGFVSDARKLFDFVGFK--DVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTT 224
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LIAGYAQ ++P+EAI LFR+MQ+E V+PDEIAMLA LSACA LGA+ELGEWIHNYIE++G
Sbjct: 225 LIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHG 284
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L IV L NALIDMYAKSG I +AL+VFENMK KSVITW+T+IA LALHGLG EA+DMF
Sbjct: 285 LCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFL 344
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
RME+A+V+PNE+TF+AILSAC HVG+V++GR YF+ M+S Y IEPKIE YGCMIDLL RA
Sbjct: 345 RMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARA 404
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
GYLQEA+KLL MPFEANA IWGSLLAASN + D EL + AL+HL KLEP NSGNY +LS
Sbjct: 405 GYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLS 464
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N YA LG+WNESG +RK+MR+ GVKK PG S IE++ V+EF+AGD S +Y +LC
Sbjct: 465 NTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLC 524
Query: 481 KINGQMKFAEHLQNEFSGVLE 501
KI Q+K A Q E+S L+
Sbjct: 525 KIILQLKMAGSYQEEWSKFLD 545
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH ++ L+ + ID G A +F N + + + T I L+
Sbjct: 43 IHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSS 102
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
A+ +++R+ ++P+ + ++L A + VE+GR+ S ++ +
Sbjct: 103 PINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSS-ALDMDVNVAT 161
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+I + G++ +A KL + F+ + A+W +++A G V++GE
Sbjct: 162 SLIQMYSSCGFVSDARKLFDFVGFK-DVALWNAMVA-----GYVKVGE 203
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/502 (61%), Positives = 402/502 (80%), Gaps = 2/502 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLN 59
M+ R LD +N LLS FI S SSLGFS YAYS+FT + P +++LYNT I+AL + P
Sbjct: 34 MLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIFLYNTIIRALSLSPQPSL 93
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
++ L+N+IQ++ LRPD+YSFPF LKAV++LS + G + H Q + GL S +HV+ +LI+
Sbjct: 94 SIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHSQAIRFGLHSHLHVLVSLIR 153
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY+S I DARK+FD + L NVA+WN M+ YAK+ D+ NA+ LF+ M ++N+ISWT
Sbjct: 154 MYSSSH-ISDARKLFDGIPLTARNVALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWT 212
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI+GYA +++P++AI +FR MQ++NV PDEI +LA LSACAQLGA+ELGEWI NYI+ +
Sbjct: 213 ALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIH 272
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL+ VPL+NALIDMYAKSG I +AL +FE+MK+K+++TWTTMIAGLALHGLG +AL+MF
Sbjct: 273 GLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMF 332
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
SRMER RVKPNEITFIA+LSAC HVGLV+L R +F M+SRY I+PKIE YGCMIDLLGR
Sbjct: 333 SRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGR 392
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AGYLQEA++LL++MPFE NAAIWGSLLAAS +GD LGE L+HLI+LEP+NSGNYA+L
Sbjct: 393 AGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERTLKHLIELEPNNSGNYALL 452
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIYA LGRW S +RK+MRD GVKK+PG S+IEV+ RV+EF+AG+TSHP FD +Y+++
Sbjct: 453 SNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNNRVNEFIAGETSHPQFDEIYEVI 512
Query: 480 CKINGQMKFAEHLQNEFSGVLE 501
KIN Q + +E L+ E +LE
Sbjct: 513 YKINEQSRLSESLEKECFELLE 534
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/490 (60%), Positives = 377/490 (76%), Gaps = 10/490 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ RGLDQ++ LL+RFI + +SLG S YAYS+F +P ++ YN I AL + NP A
Sbjct: 53 MLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRPSIFFYNNVIWAL-SSSNPTRA 111
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+N I+ + PD+YSFPFVLKAVV LS + +G++IHCQ + +GLDS VV +L+QM
Sbjct: 112 ISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHPSVVTSLVQM 171
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN--VISW 178
Y+SC + ARK+FD + + + +WN M+AGYAKVG+++NAR LFE M EK+ V+SW
Sbjct: 172 YSSCAHLSSARKLFDGATFK--HAPLWNAMLAGYAKVGNMSNARNLFECMPEKDRDVVSW 229
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
TTLI+GY Q PNEAITLFR M ++NV+PDEIA+LA LSACA LGA++LGEWIHNYIE+
Sbjct: 230 TTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQLGEWIHNYIEK 289
Query: 239 YG--LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ L VPL N+LIDMYAKSG I KA Q+F+NMK+K++ITWTT+I+GLALHG G+EAL
Sbjct: 290 HNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISGLALHGFGKEAL 349
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
D+FS ME+ARVKPNE+T IA+LSAC HVGLVELGR F M+S+YGIEPKIE YGCMIDL
Sbjct: 350 DVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDL 409
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAGYLQEA +L+R MP EANAA+WGSLL+ASN YGD L AL+HL LEPHN GNY
Sbjct: 410 LGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHLSVLEPHNCGNY 469
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
++LSN YA LG W E+ +RKVMRD +K+PG S++E++ RV+EF+AGD + F
Sbjct: 470 SLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFVELNNRVYEFIAGDKLNICF---L 526
Query: 477 QILCKINGQM 486
+L INGQ+
Sbjct: 527 DVLQSINGQL 536
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/496 (60%), Positives = 371/496 (74%), Gaps = 10/496 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFT--HKSKPDVYLYNTTIKALCQTDNPL 58
++ L QN+ LSRFI +SL + Y+YSIFT H +++YN I AL ++ L
Sbjct: 36 ILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVYNNIIYALYSSNAKL 95
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
AV ++ ++ L D+YS P+VLK+VV L+ LG++IHC V TGLD +V V ++LI
Sbjct: 96 -AVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLI 154
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE--KNVI 176
QMY SC + ARK+FDE N V N M+ Y KVGD++NAR LF+ M E K+V
Sbjct: 155 QMY-SCYDVCSARKLFDEFG---GNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVF 210
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SWT +I+GY Q PNEAI LFRRMQ+ENVKPDEIA+LA LSACA LGA+ LGEWIHNYI
Sbjct: 211 SWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYI 270
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
E++ L+ IVPL N+LIDMYAKSG I KAL++FENMK+K++ITWTTMIAGLALHGLG+EAL
Sbjct: 271 EKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEAL 330
Query: 297 DMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+FS ME+ RVKPNE+TFIAILSAC HVGLVELGR YF M+SRYGIEPKIE YGCMID
Sbjct: 331 RVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMID 390
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG+LQEA++++ RMPFEANAAIWGSLLAAS GD EL E AL+HL LEP + GN
Sbjct: 391 LLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGN 450
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y++LSN YA LGRWNES +RKVM+D GV+K+PG S+IEV+ V+EF+AGD F +
Sbjct: 451 YSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAGDKLSIYFVDI 510
Query: 476 YQILCKINGQMKFAEH 491
Y +L ++GQ+K H
Sbjct: 511 YDVLHSLDGQIKIEIH 526
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/495 (55%), Positives = 378/495 (76%), Gaps = 7/495 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN- 59
MI+ GL+++N +++FI++CS+ G YAYS+FTH+ P+ YL+NT I+AL D
Sbjct: 38 MIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYLHNTMIRALSLVDERNAH 97
Query: 60 --AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ +Y K A +PD ++FPFVLK VV++S + GR++H Q V G DS VHVV L
Sbjct: 98 SIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGL 157
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT--EKNV 175
IQMY+SC + DARKVFDE+ RV +V VWN ++AGY KVG+++ AR L E+M +N
Sbjct: 158 IQMYSSCGGLGDARKVFDEM--RVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNA 215
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT +I+GYA+ + +EAI +F+RM +ENV PDE+ +LA LSACA LG++ELGE I +Y
Sbjct: 216 VSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ G+N V LNNA+IDMYAKSG I KAL+VFE++ ++V+TWTT+I GLA HG G EA
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEA 335
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L MF RM +A VKPN++TFIAILSAC HVG V+LG R+FN M+S+YGI P IE YGCMID
Sbjct: 336 LVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMID 395
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EAE++++ MPFE+NAAIWGSLLAASN++ D+++GE AL LIKLEP+NSGN
Sbjct: 396 LLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGN 455
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L+N+Y+ LGRW+ES +RK+M+ +GVKK+ G S IEV RV++F++GD SHP +++
Sbjct: 456 YMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVENRVYKFISGDLSHPQVEKI 515
Query: 476 YQILCKINGQMKFAE 490
+++L +++ Q++ E
Sbjct: 516 HELLQEMDLQIQSNE 530
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 67/375 (17%)
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FV + + ++ ++ HC + TGL+ D VA I+ ++ + A VF
Sbjct: 17 FVTSLKIHGTNLKTLKQSHCFMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPFP 76
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N + NTM+ RAL L+ E+N S AIT++R+
Sbjct: 77 --NTYLHNTMI------------RAL-SLVDERNAHSI---------------AITVYRK 106
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
KPD L ++ V G +H +G ++ V + LI MY+ G
Sbjct: 107 FWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGG 166
Query: 261 IGKALQVFENMKNKSV---------------------------------ITWTTMIAGLA 287
+G A +VF+ M+ + V ++WT +I+G A
Sbjct: 167 LGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYA 226
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
G EA+++F RM V P+E+T +A+LSAC +G +ELG R + + R G+ +
Sbjct: 227 RSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMNRAV 285
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
+ID+ ++G + +A ++ + E N W +++ +G ++K
Sbjct: 286 SLNNAVIDMYAKSGNITKALEVFESVN-ERNVVTWTTIITGLATHGHGAEALVMFDRMVK 344
Query: 408 --LEPHNSGNYAILS 420
++P++ AILS
Sbjct: 345 AGVKPNDVTFIAILS 359
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/492 (55%), Positives = 378/492 (76%), Gaps = 7/492 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN- 59
MI+ GL+++N +++FI++CS+ G YAYS+FTH+ P+ YL+NT I+AL D P
Sbjct: 38 MIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAH 97
Query: 60 --AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ +Y K+ A +PD ++FPFVLK V++S + GR+IH Q V G DS VHVV L
Sbjct: 98 SIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGL 157
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT--EKNV 175
IQMY SC + DARK+FDE+ ++ +V VWN ++AGY KVG+++ AR+L E+M +N
Sbjct: 158 IQMYFSCGGLGDARKMFDEMLVK--DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNE 215
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT +I+GYA+ + +EAI +F+RM +ENV+PDE+ +LA LSACA LG++ELGE I +Y
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ G+N V LNNA+IDMYAKSG I KAL VFE + ++V+TWTT+IAGLA HG G EA
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEA 335
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L MF+RM +A V+PN++TFIAILSAC HVG V+LG+R FN M+S+YGI P IE YGCMID
Sbjct: 336 LAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID 395
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EA+++++ MPF+ANAAIWGSLLAASN++ D+ELGE AL LIKLEP+NSGN
Sbjct: 396 LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGN 455
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L+N+Y+ LGRW+ES +R +M+ +GVKKM G S IEV RV++F++GD +HP +R+
Sbjct: 456 YMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERI 515
Query: 476 YQILCKINGQMK 487
++IL +++ Q++
Sbjct: 516 HEILQEMDLQIQ 527
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 156/378 (41%), Gaps = 73/378 (19%)
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FV + + ++ ++ HC + TGL+ D VA I+ +C
Sbjct: 17 FVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIE---AC---------------- 57
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE---AITL 197
+ G L A ++F N T+I + +D+PN AIT+
Sbjct: 58 --------------SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITV 103
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
+R++ KPD L ++ V G IH + +G ++ V + LI MY
Sbjct: 104 YRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFS 163
Query: 258 SGKIGKALQVFENMKNKSV---------------------------------ITWTTMIA 284
G +G A ++F+ M K V ++WT +I+
Sbjct: 164 CGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVIS 223
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
G A G EA+++F RM V+P+E+T +A+LSAC +G +ELG R + + R G+
Sbjct: 224 GYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMN 282
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQH 404
+ +ID+ ++G + +A + + E N W +++A +G
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNR 341
Query: 405 LIK--LEPHNSGNYAILS 420
++K + P++ AILS
Sbjct: 342 MVKAGVRPNDVTFIAILS 359
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/395 (56%), Positives = 303/395 (76%), Gaps = 3/395 (0%)
Query: 94 LGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVA 152
LG ++H + TG + SD HV A+L+Q+Y +C+ + DAR VF E+++R +V WN M+A
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVR--DVVAWNVMIA 153
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
GY K GDL +AR LF+ M E+NV+SWTT+I GYAQM +P EA+ +FRRMQVE ++PD +A
Sbjct: 154 GYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVA 213
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+L+ LSAC LGAV+LGEW+H ++ + GL +PL N++IDMY K G I KA++VFE M+
Sbjct: 214 LLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGME 273
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
KSV+TWTT+IAG ALHGLG +A++MF RMER + PN++TF+AILSAC HVGL +LGR
Sbjct: 274 EKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRW 333
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
YFNIM S+Y I+P++E YGCM+DLLGRAG L+EA+ L++ MP +ANAAIWG+LLAAS +
Sbjct: 334 YFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTH 393
Query: 393 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 452
GD +LGE AL HLI+LEP NSGNY +LSNI+A RW++ K+RK M++ G++ +PG S
Sbjct: 394 GDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASS 453
Query: 453 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
IEV VHEF + D SHP ++ ++LC+IN MK
Sbjct: 454 IEVDGMVHEFTSRDGSHPFLHKICEVLCEINTNMK 488
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 38/274 (13%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
+A +F + +V + T I Q P AV ++ ++Q + PD + VL A
Sbjct: 163 HARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACG 222
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L ++LG +H V GL ++ ++ ++I MY C CI A +VF+ + + +V W
Sbjct: 223 DLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEK--SVVTW 280
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
T++AG+A G G +A+ +FRRM+ EN+
Sbjct: 281 TTLIAGFALHG------------------------LGL-------QAVEMFRRMERENMA 309
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
P+++ LA LSAC+ +G +LG W N + QY + V ++D+ ++G + +A
Sbjct: 310 PNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQD 369
Query: 267 VFENMKNKS-VITWTTMIAGLALHG---LGREAL 296
+ ++M K+ W ++A HG LG EAL
Sbjct: 370 LVKDMPLKANAAIWGALLAASRTHGDADLGEEAL 403
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/396 (55%), Positives = 285/396 (71%), Gaps = 1/396 (0%)
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
++H V G +D H A+L+Q Y SC + AR+VFDE + +V WN M+ GY K
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYA-DVVSWNVMIDGYVK 150
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
GDL AR LF++M +NV+SWT +I YAQM QP EAI +FRRMQVE ++PD +A+L+
Sbjct: 151 SGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSV 210
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
LSAC LG V+LGEW+H ++ + GL +PL NA+IDMY K G + KAL+VFE M+ KS+
Sbjct: 211 LSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSI 270
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+TWTTMIAG ALHGLG EA+++F RME+ V PN+ITF+A+LS C HVGL +LGR YF
Sbjct: 271 VTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKT 330
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
M S+Y I+P++E YGCMIDLLGRAG L EA L++ MPF+ANAAIWG+LLAA+ +GD E
Sbjct: 331 MVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTE 390
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 456
LGE AL HLI+LEPHNSGNY +LSNIYA RW+ ++R MRD G++ +PG S I+V
Sbjct: 391 LGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVD 450
Query: 457 KRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
VHEF + D SHP ++ ++LC IN +K H+
Sbjct: 451 GMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHI 486
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID G A +F +V + I A Q P A+ ++ ++Q + PD
Sbjct: 144 MIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPD 203
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ VL A L ++LG +H + GL ++ ++ A+I MY C + A +VF+
Sbjct: 204 GVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFE 263
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ + ++ W TM+AG+ AL L +E A+
Sbjct: 264 GMEQK--SIVTWTTMIAGF----------ALHGLGSE---------------------AV 290
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-IHNYIEQYGLNTIVPLNNALIDM 254
LFRRM+ ENV P++I LA LS C+ +G +LG W + QY + V +ID+
Sbjct: 291 ELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDL 350
Query: 255 YAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG---LGREAL 296
++G + +A + ++M K+ W ++A HG LG +AL
Sbjct: 351 LGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQAL 396
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/396 (55%), Positives = 285/396 (71%), Gaps = 1/396 (0%)
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
++H V G +D H A+L+Q Y SC + AR+VFDE + +V WN M+ GY K
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASA-DVVSWNVMIDGYVK 154
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
GDL AR LF++M +NV+SWT +I YAQM QP EAI +FRRMQVE ++PD +A+L+
Sbjct: 155 SGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSV 214
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
LSAC LG V+LGEW+H ++ + GL +PL NA+IDMY K G + KAL+VFE M+ KS+
Sbjct: 215 LSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSI 274
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+TWTTMIAG ALHGLG EA+++F RME+ V PN+ITF+A+LS C HVGL +LGR YF
Sbjct: 275 VTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKT 334
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
M S+Y I+P++E YGCMIDLLGRAG L EA L++ MPF+ANAAIWG+LLAA+ +GD E
Sbjct: 335 MVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTE 394
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 456
LGE AL HLI+LEPHNSGNY +LSNIYA RW+ ++R MRD G++ +PG S I+V
Sbjct: 395 LGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVD 454
Query: 457 KRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
VHEF + D SHP ++ ++LC IN +K H+
Sbjct: 455 GMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHI 490
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID G A +F +V + I A Q P A+ ++ ++Q + PD
Sbjct: 148 MIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPD 207
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ VL A L ++LG +H + GL ++ ++ A+I MY C + A +VF+
Sbjct: 208 GVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFE 267
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ + ++ W TM+AG+A G G EA+
Sbjct: 268 GMEQK--SIVTWTTMIAGFALHG------------------------LGL-------EAV 294
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-IHNYIEQYGLNTIVPLNNALIDM 254
LFRRM+ ENV P++I LA LS C+ +G +LG W + QY + V +ID+
Sbjct: 295 ELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDL 354
Query: 255 YAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG---LGREAL 296
++G + +A + ++M K+ W ++A HG LG +AL
Sbjct: 355 LGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQAL 400
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/408 (55%), Positives = 298/408 (73%), Gaps = 5/408 (1%)
Query: 83 LKAVVKLSTIE--LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
L A K+ + LG ++H V GL SD HV A+LIQ Y SC + AR VFD+ + +
Sbjct: 74 LNAAAKIPHLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDK 133
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN M++GY K G+L AR LF++M +NV+SWTT+I YAQM QP EA+ +FRR
Sbjct: 134 --DIFCWNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRR 191
Query: 201 MQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
MQVE ++PD +A+L+ LSAC LGAV+LGEW+H ++ + GL +PL NA+IDMY K G
Sbjct: 192 MQVEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLG 251
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ KA++VFE M KSV+TWTT+IAG ALHGLG EA++MF RME V PN++TF+AILS
Sbjct: 252 CVRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILS 311
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC HVGL +LGR YF IM S+Y I+ ++E YGCM+DLLGRAGYL EA+ L++ MPF+ANA
Sbjct: 312 ACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANA 371
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
AIWG+LLAA+ +GD ELG+ AL HLI+LEPHNSGNY +LSNIYA RW++ K+RK M
Sbjct: 372 AIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQM 431
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+D G++ +PG S IEV VHEF + D SHP ++ ++LC+I MK
Sbjct: 432 KDRGLRNVPGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMK 479
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 146/334 (43%), Gaps = 71/334 (21%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYN-------------- 45
+IVR GL + H+ + I + S G A S+F + D++ +N
Sbjct: 94 VIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSGNLAC 153
Query: 46 -----------------TTIKALCQTDNPLNAVILYNKIQA-SALRPDNYSFPFVLKAVV 87
T I A Q P+ AV ++ ++Q + PD + VL A
Sbjct: 154 ARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVLSACG 213
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L ++LG +H V GL + ++ A+I MY C+ A +VF+ + + +V W
Sbjct: 214 DLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQK--SVVTW 271
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
T++AG+A G G EAI +FRRM++ENV
Sbjct: 272 TTVIAGFALHG------------------------LGL-------EAIEMFRRMEMENVA 300
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
P+++ LA LSAC+ +G +LG W + QY + V ++D+ ++G + +A
Sbjct: 301 PNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQD 360
Query: 267 VFENMKNKS-VITWTTMIAGLALHG---LGREAL 296
+ ++M K+ W ++A HG LG++AL
Sbjct: 361 LVQDMPFKANAAIWGALLAAARTHGDAELGKQAL 394
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/379 (56%), Positives = 289/379 (76%), Gaps = 2/379 (0%)
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
SD HV ++L+Q+Y +C + DAR VFDE+++R +V WN M+AGY K GD +AR LF+
Sbjct: 111 SDAHVSSSLVQLYCTCGHVADARSVFDEMAVR--DVVAWNVMIAGYVKAGDQAHARELFD 168
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
M E+NV+SWTT+I GYAQM +P +A+ +FRRMQVE ++ D +A+L+ L+AC LGAV+L
Sbjct: 169 AMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDL 228
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
GEW+H ++ + GL +PL N++IDMY K G I KA++VFE M+ KSV+TWTT+IAG AL
Sbjct: 229 GEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFAL 288
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
HGLG +A++MF RMER + PN +TF+AILSAC HVGL +LGR YFNIM S+Y I+P++E
Sbjct: 289 HGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVE 348
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
YGCM+DLLGRAG L+EA+ L++ MP +ANAAIWG+LLAA+ +GD LGE AL HLI+L
Sbjct: 349 HYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIEL 408
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
EP+NSGNY +LSNI+A RW + K+RK MR+ G++ +PG S IEV VHEF + D S
Sbjct: 409 EPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTSRDWS 468
Query: 469 HPDFDRLYQILCKINGQMK 487
HP + ++LC+I+ MK
Sbjct: 469 HPFIHTICEVLCEIDTNMK 487
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 138/301 (45%), Gaps = 42/301 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N +++ ++ + G +A +F + +V + T I Q P A
Sbjct: 139 MAVRDVVAWNVMIAGYVKA----GDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKA 194
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V ++ ++Q + D + VL A L ++LG +H V GL ++ ++ ++I M
Sbjct: 195 VEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDM 254
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C CI A +VF+ + + +V W T++AG+A G
Sbjct: 255 YMKCGCIEKAVEVFEGMEEK--SVVTWTTLIAGFALHG---------------------- 290
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQY 239
G +A+ +F RM+ EN+ P+ + LA LSAC+ +G +LG W N + QY
Sbjct: 291 --LGL-------QAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQY 341
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALH---GLGREA 295
+ V ++D+ ++G + +A + +NM K+ W ++A H GLG +A
Sbjct: 342 RIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQA 401
Query: 296 L 296
L
Sbjct: 402 L 402
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/480 (42%), Positives = 315/480 (65%), Gaps = 3/480 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV GL Q++ ++++ +D C LG DYA +F S P+V+LYN+ I+A +
Sbjct: 33 IIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDV 92
Query: 61 VILYNKIQASALR-PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +Y ++ + PD ++FPF+ K+ L + LG+++H G V ALI
Sbjct: 93 IRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVTENALID 152
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY + DA KVFDE+S R +V WN++++GYA++G + A+ LF LM +K ++SWT
Sbjct: 153 MYMKFDDLVDAHKVFDEMSER--DVISWNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWT 210
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I+GY + EA+ FR MQ+ ++PDEI++++ L +CA LG++ELG+WIH Y E+
Sbjct: 211 AMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKWIHMYAERR 270
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL + NALI+MY+K G + +A+Q+FE K K VI+W+TMI+G A HG A + F
Sbjct: 271 GLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYHGNAHRAFETF 330
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+RA+VKPN ITF+ +LSAC HVGL + G +YF++M+ Y IEPKIE YGC+ID+L R
Sbjct: 331 IEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L+ A ++ + MP + ++ IWGSLL++ G++++ A+ HL+++EP + GNY +L
Sbjct: 391 AGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLL 450
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+NIYA LG+W + ++RK++R +KK PGCS IEV+ V EFVAGD S P + + +L
Sbjct: 451 ANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEVNNIVQEFVAGDNSKPFWTEISLVL 510
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 114/247 (46%), Gaps = 19/247 (7%)
Query: 230 EW--IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
EW IH I +GL+ + ++D+ K G + A ++F + N +V + ++I
Sbjct: 25 EWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 288 LHGLGREALDMFSRMERARVK-PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
+ L + + ++ ++ R ++ P+ TF + +C +G LG++ + ++G
Sbjct: 85 HNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHL-YKFGPRFH 143
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
+ +ID+ + L +A K+ M E + W SLL+ G ++ + L HL+
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEMS-ERDVISWNSLLSGYARLGQMKKAK-GLFHLM 201
Query: 407 KLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IEV 455
++ A++S Y +G + E+ + M+ G++ +P C++ +E+
Sbjct: 202 -IDKTIVSWTAMISG-YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLEL 259
Query: 456 SKRVHEF 462
K +H +
Sbjct: 260 GKWIHMY 266
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 327/505 (64%), Gaps = 5/505 (0%)
Query: 2 IVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I G+ +N + SR + + S G YA +F KPD+++ NT I+A + NP++
Sbjct: 59 ITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPID 118
Query: 60 AVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
AV+ Y+++ ++S + PD ++FP +LKA ++ ++ LG IH G S+V V L+
Sbjct: 119 AVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLV 178
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
QMYASC I A VFD + A WN M+ GY K G +AR +FE M +++V+SW
Sbjct: 179 QMYASCGLIESAGLVFDRTP--ECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSW 236
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+ +I GY Q + E + LF+ M E ++P+E ++ ALSACA LGA+E G+WI Y+E+
Sbjct: 237 SVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMER 296
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ V L ALIDMY+K G + +AL+VF MK K+V+ W+ MI GLA++G G++AL++
Sbjct: 297 KNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNL 356
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
FS+ME VKPNE+TFI IL+AC H LV+ G +F+ M S YG++P + CM+DL G
Sbjct: 357 FSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYG 416
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L +A+ +++ MPF+ N+AIWG+LL A I+GD ELGE + L++L+P++ G Y +
Sbjct: 417 RAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVL 476
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNIYA GRW+ ++R++MR+ V K PGCS+I++ +HEFVAGD+SHP + +Y
Sbjct: 477 LSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAK 536
Query: 479 LCKINGQMKFAEHLQNEFSGVLESD 503
L +++ ++K A + + +L+ D
Sbjct: 537 LGEMSQELKAAGYKPDTGQVLLDMD 561
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 315/522 (60%), Gaps = 20/522 (3%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I G+ N + ++ + C S F D YA +F +P V+ +N K + P
Sbjct: 38 IKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKL 97
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V LY ++ ++PD Y++PF+ K + ++LGRE+HC V GLDS+V ALI
Sbjct: 98 GVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALIN 157
Query: 120 MYASCKCIYDARKVFD---ELSLRVWNVAV------------WNTMVAGYAKVGDLNNAR 164
MY+ C I AR +FD + + WN + W +V G+ G ++ AR
Sbjct: 158 MYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAAR 217
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
F M E++ +SWT +I GY +++ EA+ LFR MQ +KPDE M++ L+ACAQLG
Sbjct: 218 KYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLG 277
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
A+ELGEWI YI++ + + NALIDMY K G + AL +F + + TWT M+
Sbjct: 278 ALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVV 337
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
GLA++G G EAL+MFS+M +A V P+E+T++ +LSAC H G+V+ G+++F M +R+GIE
Sbjct: 338 GLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIE 397
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQH 404
P I YGCM+DLLG+AG+L+EA ++++ MP + N+ +WG+LL A I+ D E+ E A++
Sbjct: 398 PNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQ 457
Query: 405 LIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA 464
+++LEP+N Y + NIYA +W++ ++R+VM D G+KK PGCS IE++ VHEFVA
Sbjct: 458 ILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVA 517
Query: 465 GDTSHPDFDRLYQILCKINGQMKFAEHLQNE---FSGVLESD 503
GD SHP +Y L K+ +K A + N F + E D
Sbjct: 518 GDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEED 559
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 195/480 (40%), Positives = 319/480 (66%), Gaps = 7/480 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
L Q++ L+++ +D C+ ++YA +F + P+ +LYN I+A + A+ +Y
Sbjct: 41 SLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVY 100
Query: 65 NKIQASA-----LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
++ + + PD ++FPFV+K+ L +LG+++H G S+ V +L++
Sbjct: 101 KQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVE 160
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C + DA KVF+E++ R + WNT+++G+ ++G + ARA+FE M +K + SWT
Sbjct: 161 MYVKCDSLDDAHKVFEEMTER--DAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWT 218
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+++GYA++ +A+ FRRMQ+ ++PDEI++++ L ACAQLGA+ELG+WIH Y ++
Sbjct: 219 AIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKA 278
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + + NALI+MYAK G I + ++F+ M + VI+W+TMI GLA HG EA+++F
Sbjct: 279 GFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELF 338
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M++A+++PN ITF+ +LSAC H GL+ G RYF MK Y IEP +E YGC+++LLG
Sbjct: 339 QEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGL 398
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+G L +A +L+++MP + ++AIWGSLL++ + ++E+ A++HL++LEP ++GNY +L
Sbjct: 399 SGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLL 458
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SN+YA LG+W+ ++RK+MR +KK PGCS IEV V EF +GD S P +Y++L
Sbjct: 459 SNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVL 518
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 311/471 (66%), Gaps = 3/471 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ GL Q++ ++++ +D C + DYA +F S P+V+LYN+ I+A +
Sbjct: 33 IIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDV 92
Query: 61 VILYNKIQASALR-PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +Y ++ + PD ++FPF+ K+ L + LG+++H G V ALI
Sbjct: 93 IRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALID 152
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY + DA KVFDE+ R +V WN++++GYA++G + A+ LF LM +K ++SWT
Sbjct: 153 MYMKFDDLVDAHKVFDEMYER--DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWT 210
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I+GY + EA+ FR MQ+ ++PDEI++++ L +CAQLG++ELG+WIH Y E+
Sbjct: 211 AMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR 270
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + NALI+MY+K G I +A+Q+F M+ K VI+W+TMI+G A HG A++ F
Sbjct: 271 GFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETF 330
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+ M+RA+VKPN ITF+ +LSAC HVG+ + G RYF++M+ Y IEPKIE YGC+ID+L R
Sbjct: 331 NEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L+ A ++ + MP + ++ IWGSLL++ G++++ A+ HL++LEP + GNY +L
Sbjct: 391 AGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLL 450
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+NIYA LG+W + ++RK++R+ +KK PG S IEV+ V EFV+GD S P
Sbjct: 451 ANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/500 (41%), Positives = 306/500 (61%), Gaps = 37/500 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDN-PLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA S+ P++ LYN I+ L ++N + +++Y ++ + + PDNY+ PFVLKA
Sbjct: 91 YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKAC 150
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ + G E+H Q + GL SDV+V L++MYA C I ARKVFD R ++
Sbjct: 151 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR--DLVS 208
Query: 147 WNTMVAGYAKVG----------------------------------DLNNARALFELMTE 172
W TM+ GY K+G D N AR +F+ M
Sbjct: 209 WTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPV 268
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
KNV+SW ++I+G AQ Q E++ +FR+MQ VKPD++ ++A L++CA LG +ELG+W+
Sbjct: 269 KNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWV 328
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H Y+++ + + NAL+DMYAK G I +A VF+ M K V ++T MI GLA+HG G
Sbjct: 329 HAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQG 388
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
+ALD+FS M + ++P+E+TF+ +L+AC HVGLVE GR+YF M + Y + P++E YGC
Sbjct: 389 GKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGC 448
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLLGRAG + EAE+ +R MP E +A + G+LL A I+G VELGE ++ + K+EP
Sbjct: 449 MVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRK 508
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
G Y ++SNIY+ RW ++ K+RK M++ ++K PGCS IE+ +HEF GD SHP
Sbjct: 509 DGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKI 568
Query: 473 DRLYQILCKINGQMKFAEHL 492
+Y++L +I +K E L
Sbjct: 569 KEIYKLLDEIMSHLKNNECL 588
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 72/360 (20%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D G +++A +F +V +N+ I L Q ++ ++ K+Q ++PD
Sbjct: 246 LVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 305
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ + VL + L +ELG+ +H + +D + AL+ MYA C
Sbjct: 306 DVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKC----------- 354
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
G ++ A +F+ M K+V S+T +I G A Q +A+
Sbjct: 355 ----------------------GSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKAL 392
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDM 254
LF M ++PDE+ + L+AC+ +G VE G ++ + Y L + ++D+
Sbjct: 393 DLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDL 452
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
++G I +A + NM ++P+
Sbjct: 453 LGRAGLINEAEEFIRNMP----------------------------------IEPDAFVL 478
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE-QYGCMIDLLGRAGYLQEAEKLLRRM 373
A+L AC G VELG ++MK IEP+ + Y M ++ A ++A KL + M
Sbjct: 479 GALLGACKIHGKVELGE---SVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 535
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/470 (40%), Positives = 316/470 (67%), Gaps = 7/470 (1%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q++ L+++ +D C+ G ++YA +F + P+ +LYN I+A + A+ +Y
Sbjct: 42 LSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYK 101
Query: 66 KIQASA-----LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ + + PD ++FPFV+K+ L +LG+++H G S+ V +L++M
Sbjct: 102 QMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEM 161
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + DA +VF+E++ R + WNT+++G+ ++G + ARA+FE M +K + SWT
Sbjct: 162 YVKCDSLDDAHRVFEEMTER--DAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTA 219
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+++GYA++ +A+ FRRMQ+ ++PDEI++++ L CAQLGA+ELG+WIH Y ++ G
Sbjct: 220 IVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAG 279
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + NALI+MYAK G I + ++F+ MK + VI+W+TMI GLA HG REA+++F
Sbjct: 280 FLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQ 339
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M++A+++P+ ITF+ +L+AC H GL+ G RYF MK Y IEP +E YGC+++LLG +
Sbjct: 340 EMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLS 399
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L +A +L+++MP + ++ IWGSLL++ +G++++ A++HL++LEP ++GNY +LS
Sbjct: 400 GRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLS 459
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
N+YA LG+W+ ++RK+MR +KK PGCS IEV V EF +GD S P
Sbjct: 460 NLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKP 509
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 308/486 (63%), Gaps = 2/486 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + + + I S G D A +F D+ +N+ I + A+ Y
Sbjct: 137 GFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFY 196
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ ++PD + V+ + +L ++LGRE HC GL V + AL+ MY C
Sbjct: 197 REMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKC 256
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ ARK+FD ++ + + W TMV GYA+ G L+ A LF+ M +K+V+ W +I G
Sbjct: 257 GNLESARKLFDSMTNKT--MVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGG 314
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y ++ EA+ LF MQ N+ PDE+ M++ LSAC+QLGA+++G WIH+YIE++ L+
Sbjct: 315 YVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLN 374
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V L ALIDMYAK GKI KA+QVF+ + ++ +TWT +I+GLALHG A+ FS M
Sbjct: 375 VALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMID 434
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V P+E+TF+ +LSACCH GLVE GR+YF+ M S++ + PK++ Y CM+DLLGRAG L+
Sbjct: 435 NSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLE 494
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE+L++ MP EA+A +WG+L A I+G+V +GE A L++++PH+SG Y +L+N+Y
Sbjct: 495 EAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYG 554
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
W E+GK RK+MR GV+K PGCS IEV+ V+EF+ D SHP +++Y+ L ++
Sbjct: 555 EAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTR 614
Query: 485 QMKFAE 490
Q++ E
Sbjct: 615 QLELVE 620
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 221/428 (51%), Gaps = 69/428 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++ GL ++ SR I C+ + D Y +I + P+ + +N I+ ++NP
Sbjct: 29 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 88
Query: 59 NAVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
AV+LY ++ Q +PDNY++P + KA +LS I +G EI + G DSD+ V A+
Sbjct: 89 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 148
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I + SC + ARK+FD+ +R ++ WN+M+ GY + G
Sbjct: 149 IHLLVSCGDLDGARKMFDKSCVR--DLVSWNSMINGYVRRG------------------- 187
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W EA+ +R M+VE +KPDE+ M+ +S+CAQL ++LG H YIE
Sbjct: 188 WAY------------EALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIE 235
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL------ 291
+ GL VPL NAL+DMY K G + A ++F++M NK++++WTTM+ G A GL
Sbjct: 236 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWK 295
Query: 292 -------------------------GREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
G+EAL +F+ M+ + P+E+T ++ LSAC +G
Sbjct: 296 LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGA 355
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++G + ++ ++ + + +ID+ + G + +A ++ + +P N+ W +++
Sbjct: 356 LDVGIWIHHYIE-KHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAII 413
Query: 387 AASNIYGD 394
+ ++G+
Sbjct: 414 SGLALHGN 421
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/490 (41%), Positives = 314/490 (64%), Gaps = 9/490 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD++++LL++ + + G ++Y++ IF +P+++L+NT I L D+ ++ +Y
Sbjct: 37 GLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIY 96
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ L PD+++FPF+LKA +L +LG ++H V G +SD V +L+ +Y C
Sbjct: 97 HSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKC 156
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD-------LNNARALFELMTEKNVIS 177
I +A KVFD++ + NVA W +++GY VG A ++F+ M EK+++S
Sbjct: 157 GFIDNAFKVFDDIPEK--NVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVS 214
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+++I GYA P EA+ LF +M E +PD AM+ L ACA+LGA+ELG W N ++
Sbjct: 215 WSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMD 274
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ L ALIDMYAK G++ A +VF M+ K ++ W I+GLA+ G + A
Sbjct: 275 RNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFG 334
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F +ME++ ++P+ TF+ +L AC H GLV+ GR+YFN M+ + + P+IE YGCM+DLL
Sbjct: 335 LFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLL 394
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG+L EA +L++ MP EANA +WG+LL ++ D +L E L+ LI LEP NSGNY
Sbjct: 395 GRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYV 454
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSNIY+ +W ++ KIR +M + G+KK+PG S+IEV VHEF+ GDTSHP +++Y
Sbjct: 455 LLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYA 514
Query: 478 ILCKINGQMK 487
L ++ +K
Sbjct: 515 KLGELVKDLK 524
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+H + + GL+ L N ++ G + ++F K ++ + TMI GL L+
Sbjct: 29 VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDS 88
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+E+++++ M + + P+ TF +L AC + +LG + ++ + G E
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLV-VKAGCESDAFVNT 147
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 400
++ L G+ G++ A K+ +P E N A W ++++ G + +G+C
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIIS-----GYIGVGKC 190
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/465 (44%), Positives = 307/465 (66%), Gaps = 2/465 (0%)
Query: 25 FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
F YA +IF H P LYN+ I+AL + PL A+ LY+ + S L+PD+ ++PFV+K
Sbjct: 115 FLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 174
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A + S G +H V +G + D ++V++LI +YA+ K + A+++F+ S R +V
Sbjct: 175 ACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR--DV 232
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
WN M+ GY K ++ +AR +F+ M ++VISW T+I GYA +PNEA+ LF +M+
Sbjct: 233 VSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAV 292
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
VKP E +++ LSACA LGA++ G +H YI + + AL+DMYAK GKI A
Sbjct: 293 GVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLA 352
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
QVF M++K V+ W T+IAG+A+HG +EA +F M+ A V+PN+ITF+AILSAC H
Sbjct: 353 TQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHA 412
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G+V+ G++ + M S YGIEPK+E YGC+IDLL RAG+L+EA +L+ MP E N + G+
Sbjct: 413 GMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGA 472
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL I+G+ ELGE + LI L+P +SG Y +LSNIYA +W+++ K+R +M+ G+
Sbjct: 473 LLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGI 532
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
K+PG S IE+ VH FVAGD SHP+ +++Y+ L +I+ ++K A
Sbjct: 533 SKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 577
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 320/520 (61%), Gaps = 33/520 (6%)
Query: 1 MIVRGLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+I LD NN +L++ + +CSS YA S+F PD +++NT I+A + NP
Sbjct: 26 IIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNP 85
Query: 58 LNAVILYNKIQASALRP-DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
++ L+ +++ P D+YS V++A +L G+++H Q + GL SD+ V A
Sbjct: 86 QESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETA 145
Query: 117 LIQMYASCKCIYDARKVFDELS---LRVWNVAV--------------------------W 147
LI+MYA I AR + DE++ L +NV + W
Sbjct: 146 LIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSW 205
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NTM+ G+A +GD+ A+ LF+ E+++ISW+++IA YA+ Q NEA+ LF MQ+ NV
Sbjct: 206 NTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVL 265
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PD++ M++ LSAC +GA+ +G+ IH IE+ + + L +L+DMYAK G I +L+V
Sbjct: 266 PDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRV 325
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F M N+ V W+ MI GLA HG G ALD FS+M +KPN++TFI +LSAC H+GLV
Sbjct: 326 FNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLV 385
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YF M Y + PKIE YGC++D+LGRAG LQEA +L++ MPF +A +W +LL
Sbjct: 386 DEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLG 445
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A IY +VE+ E A +L++LEPH GNY +LSNIY+ W++ +R++M+++ ++K+
Sbjct: 446 ACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKV 505
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
PG S IEV VHEFVAGD SHP+ ++ ++L +I ++K
Sbjct: 506 PGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLK 545
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/484 (41%), Positives = 304/484 (62%), Gaps = 6/484 (1%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L F C LG Y +F + + DV +N+ I A Q P A+ L+ +++ +
Sbjct: 177 LIHFYAKCGELGL---GYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNV 233
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+P+ + VL A K S E GR +H + + + A++ MY C + DA++
Sbjct: 234 KPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKR 293
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD++ + ++ W TM+ GYAK+G+ + A+ +F+ M +++ +W LI+ Y Q +P
Sbjct: 294 LFDKMPEK--DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPK 351
Query: 193 EAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA+ LF +Q+ + KPDE+ +++ LSACAQLGA++LG WIH YI++ G+ L +L
Sbjct: 352 EALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSL 411
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMY K G + KAL VF +++ K V W+ MIAGLA+HG G++A+ +FS+M+ +VKPN
Sbjct: 412 IDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNA 471
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF IL AC HVGLVE GR +FN M+ YG+ P ++ Y CM+D+LGRAG L+EA +L+
Sbjct: 472 VTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIE 531
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
+MP A++WG+LL A I+ +V L E A LI+LEP N G Y +LSNIYA G+W+
Sbjct: 532 KMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDR 591
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
+RK+MRD+G+KK PGCS IEV VHEF+ GD SHP ++Y L +I +++ +
Sbjct: 592 VSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGY 651
Query: 492 LQNE 495
+ N+
Sbjct: 652 VPNK 655
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 207/428 (48%), Gaps = 70/428 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL + SR I + + F DYA +F P++Y +NT I+A + NP
Sbjct: 58 MLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPH 117
Query: 59 NAVILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+++++ + + S PD ++FPF++KA +L + G+ H + L SDV ++ +L
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I YA C + +VF + R +V WN+M+ + + G
Sbjct: 178 IHFYAKCGELGLGYRVFVNIPRR--DVVSWNSMITAFVQGG------------------- 216
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
P EA+ LF+ M+ +NVKP+ I M+ LSACA+ E G W+H+YIE
Sbjct: 217 ------------CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA---------- 287
+ + + L+NA++DMY K G + A ++F+ M K +++WTTM+ G A
Sbjct: 265 RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQG 324
Query: 288 ---------------------LHGLGREALDMFSRMERARV-KPNEITFIAILSACCHVG 325
G +EAL++F ++ ++ KP+E+T ++ LSAC +G
Sbjct: 325 IFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLG 384
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
++LG + ++ + G++ +ID+ + G LQ+A + + + +W ++
Sbjct: 385 AMDLG-GWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAM 442
Query: 386 LAASNIYG 393
+A ++G
Sbjct: 443 IAGLAMHG 450
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 3/249 (1%)
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-PDE 210
A + L+ A+ +F+ + N+ +W TLI YA P++++ +F RM ++ PD+
Sbjct: 77 AALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDK 136
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ A ++L + G+ H + + L + V + N+LI YAK G++G +VF N
Sbjct: 137 FTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVN 196
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
+ + V++W +MI G EAL++F ME VKPN IT + +LSAC E G
Sbjct: 197 IPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
R + ++ R I + M+D+ + G +++A++L +MP E + W ++L
Sbjct: 257 RWVHSYIE-RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVGYA 314
Query: 391 IYGDVELGE 399
G+ + +
Sbjct: 315 KIGEYDAAQ 323
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+G+ N HL + ID G A +F + DV++++ I L + +A+ L
Sbjct: 399 QGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIAL 458
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQ 101
++K+Q ++P+ +F +L A + +E GR Q
Sbjct: 459 FSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 496
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/467 (42%), Positives = 309/467 (66%), Gaps = 14/467 (2%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY-NKIQASALRPDNYSFPFVLKA 85
DYA IF +P+ + YNT I+AL ++++P +A++++ ++ ++ P+ ++FP V KA
Sbjct: 62 DYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKA 121
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF----------- 134
+ + GR++H V GLDSD VV+ +++MY SC + DA ++F
Sbjct: 122 CGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDG 181
Query: 135 --DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
D+ +V +WN M+ GY ++G+L AR LF+ M +++V+SW +IAGYAQ
Sbjct: 182 IRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFK 241
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ +FR MQ+ V P+ + +++ L A ++LGA+ELG+W+H Y + + L +ALI
Sbjct: 242 EAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALI 301
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G I KALQVFE + ++V+TW+T+IAGLA+HG ++ LD F MERA V P+++
Sbjct: 302 DMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDV 361
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T+I +LSAC H GLV GR +F+ M G+EP+IE YGCM+DLLGRAG L+E+E+L+
Sbjct: 362 TYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILN 421
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP + + IW +LL A ++G+VE+G+ +HL++L PH+SG+Y LSNIYA LG W
Sbjct: 422 MPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGV 481
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K+R +M++M V+K PGCS+IE+ +HEF+ D SHP +++ +L
Sbjct: 482 AKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSML 528
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 51/283 (18%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAA 216
DL+ AR +F M N S+ TLI ++ + P +A+ +F M VE+ V+P+ +
Sbjct: 60 DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEM-VEDCSVEPNCFTFPSV 118
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNT--------------------------------- 243
AC + + G +H ++GL++
Sbjct: 119 FKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDG 178
Query: 244 -------------IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
V L N +ID Y + G++ A +F+ M +SV++W MIAG A G
Sbjct: 179 CDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSG 238
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
+EA+++F M+ A V PN +T +++L A +G +ELG ++ ++ R I
Sbjct: 239 HFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELG-KWVHLYAVRNNIGVDDVLG 297
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G +++A ++ +P + N W +++A ++G
Sbjct: 298 SALIDMYAKCGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHG 339
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/484 (41%), Positives = 310/484 (64%), Gaps = 4/484 (0%)
Query: 13 LSRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
L+R C+ YA IF K KP+ +++N+ +KAL + D+P++A++L+ +++
Sbjct: 63 LTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQY 122
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
+ PD ++ VL+A + L + GR +H G S++++ ++ +YASC + +A
Sbjct: 123 DVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEA 182
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
R +F+++ R +V WN M+A K GD A LF M E+NV SWT++IAGY Q +
Sbjct: 183 RLLFEKMPQR--DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGK 240
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
EAI LF +M+ VK +E+ ++A L+ACA LGA++LG IH Y ++G V ++N
Sbjct: 241 AKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNT 300
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LIDMY K G + +A +VFE M+ ++V++W+ MI GLA+HG EAL +FS M + ++PN
Sbjct: 301 LIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPN 360
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+TFI +L AC H+GL+ GRR+F M YGI P+IE YGCM+DLL RAG L EA + +
Sbjct: 361 GVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFI 420
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
MP + N +WG+LL A ++ +VE+ E A++HL++L+P N G Y +LSNIYA GRW
Sbjct: 421 LNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWE 480
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
++ ++RK M+D VKK PG S I V VHEFVAG+ SHPD ++++Q ++ +M+
Sbjct: 481 DTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKG 540
Query: 491 HLQN 494
++ N
Sbjct: 541 YVPN 544
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 151/352 (42%), Gaps = 76/352 (21%)
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
N++ PF L R++H Q + T + + + + A + A+++F+
Sbjct: 37 NFNSPFEL------------RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFE 84
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ + VWN + + A+ D P +AI
Sbjct: 85 CVEKQKPETFVWN-------------------------------SCLKALAEGDSPIDAI 113
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF R++ +V PD + L AC L + G +H +E+ G + + L N ++ +Y
Sbjct: 114 MLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLY 173
Query: 256 AKSGKIGKALQVFENMKNKSVIT-------------------------------WTTMIA 284
A G++G+A +FE M + V+T WT+MIA
Sbjct: 174 ASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIA 233
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
G G +EA+ +F++ME A VK NE+T +A+L+AC +G ++LG R +R+G +
Sbjct: 234 GYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHE-YSNRHGFK 292
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ +ID+ + G L+EA K+ M E W +++ ++G E
Sbjct: 293 RNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMHGRAE 343
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/484 (41%), Positives = 310/484 (64%), Gaps = 4/484 (0%)
Query: 13 LSRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
L+R C+ YA IF K KP+ +++N+ +KAL + D+P++A++L+ +++
Sbjct: 63 LTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQY 122
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
+ PD ++ VL+A + L + GR +H G S++++ ++ +YASC + +A
Sbjct: 123 DVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEA 182
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
R +F+++ R +V WN M+A K GD A LF M E+NV SWT++IAGY Q +
Sbjct: 183 RLLFEKMPQR--DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGK 240
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
EAI LF +M+ VK +E+ ++A L+ACA LGA++LG IH Y ++G V ++N
Sbjct: 241 AKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNT 300
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LIDMY K G + +A +VFE M+ ++V++W+ MI GLA+HG EAL +FS M + ++PN
Sbjct: 301 LIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPN 360
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+TFI +L AC H+GL+ GRR+F M YGI P+IE YGCM+DLL RAG L EA + +
Sbjct: 361 GVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFI 420
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
MP + N +WG+LL A ++ +VE+ E A++HL++L+P N G Y +LSNIYA GRW
Sbjct: 421 LNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWE 480
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
++ ++RK M+D VKK PG S I V VHEFVAG+ SHPD ++++Q ++ +M+
Sbjct: 481 DTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKG 540
Query: 491 HLQN 494
++ N
Sbjct: 541 YVPN 544
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/478 (42%), Positives = 305/478 (63%), Gaps = 5/478 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
M+ GL Q+++ +++F+ C S SD YA +F +PD +L+N I+ +D P
Sbjct: 37 MLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEP 96
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+++LY ++ S+ + Y+FP +LKA LS E +IH Q G ++DV+ V +L
Sbjct: 97 ERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSL 156
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I YA A +FD + + WN+++ GY K G ++ A LF M EKN IS
Sbjct: 157 INSYAVTGNFKLAHLLFDRIPEP--DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS 214
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WTT+I+GY Q D EA+ LF MQ +V+PD +++ ALSACAQLGA+E G+WIH+Y+
Sbjct: 215 WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN 274
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ + L LIDMYAK G++ +AL+VF+N+K KSV WT +I+G A HG GREA+
Sbjct: 275 KTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAIS 334
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F M++ +KPN ITF A+L+AC + GLVE G+ F M+ Y ++P IE YGC++DLL
Sbjct: 335 KFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLL 394
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L EA++ ++ MP + NA IWG+LL A I+ ++ELGE + LI ++P++ G Y
Sbjct: 395 GRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYV 454
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+NI+A+ +W+++ + R++M++ GV K+PGCS I + HEF+AGD SHP+ +++
Sbjct: 455 HKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/478 (42%), Positives = 298/478 (62%), Gaps = 30/478 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++ GL ++ SR I C+ + D Y +I + P+ + +N I+ ++NP
Sbjct: 73 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 132
Query: 59 NAVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
AV+LY ++ Q +PDNY++P + KA +LS I +G EI + G DSD+ V A+
Sbjct: 133 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 192
Query: 118 IQMYASCKCIYDARKVFDELSLR---VWNVAV------------------------WNTM 150
I + SC + ARK+FD+ +R WN + W TM
Sbjct: 193 IHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGNLESARKLFDSMTNKTMVSWTTM 252
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V GYA+ G L+ A LF+ M +K+V+ W +I GY ++ EA+ LF MQ N+ PDE
Sbjct: 253 VVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDE 312
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ M++ LSAC+QLGA+++G WIH+YIE++ L+ V L ALIDMYAK GKI KA+QVF+
Sbjct: 313 VTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQE 372
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
+ ++ +TWT +I+GLALHG A+ FS M V P+E+TF+ +LSACCH GLVE G
Sbjct: 373 LPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEG 432
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
R+YF+ M S++ + PK++ Y CM+DLLGRAG L+EAE+L++ MP EA+A +WG+L A
Sbjct: 433 RKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACR 492
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I+G+V +GE A L++++PH+SG Y +L+N+Y W E+GK RK+MR GV+K P
Sbjct: 493 IHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTP 550
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/500 (40%), Positives = 305/500 (61%), Gaps = 39/500 (7%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D +L+ + CS + YA+ IF+ P+++ +NT I+ +++NP+ A+ LY +
Sbjct: 74 DMGKYLIFTLLSFCSPM---SYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQ 130
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ S + PD +++PF+LKA+ KL + G ++H + G +S V V
Sbjct: 131 MHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFV------------- 177
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
NT+V YA G +A LFELM E+N+++W ++I GYA
Sbjct: 178 --------------------QNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYA 217
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+PNEA+TLFR M + V+PD M++ LSACA+LGA+ LG H Y+ + GL+ +
Sbjct: 218 LNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLH 277
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
NAL+D+YAK G I +A +VF+ M+ KSV++WT++I GLA++G G+EAL++F +ER
Sbjct: 278 AGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKG 337
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+ P+EITF+ +L AC H G+V+ G YF MK YGI PKIE YGCM+DLLGRAG +++A
Sbjct: 338 LMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQA 397
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ ++ MP + NA +W +LL A I+G + LGE A L++LEP +SG+Y +LSN+YA
Sbjct: 398 HEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASE 457
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW++ K+R+ M GVKK PG S +E+ R+HEFV GD SHP + +Y L +I +
Sbjct: 458 QRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLL 517
Query: 487 K---FAEHLQNEFSGVLESD 503
K + H+ N + + E +
Sbjct: 518 KLEGYVPHISNVLADIEEEE 537
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 317/526 (60%), Gaps = 41/526 (7%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDY-----AYSIFTHKSKPDVYLYNTTIKALCQT 54
+I+R G Q++++ + S +++ + Y + +F KP+V+L+N IK +
Sbjct: 56 LILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIEN 115
Query: 55 DNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
+ P A++LY ++ + RP+ Y++P VLKA + G ++H V GL D H++
Sbjct: 116 NEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHIL 175
Query: 115 AALIQMYASCKCIYDARKVFD----ELSLRVWN--------------------------- 143
++ I+MYAS + +AR++ D E+ WN
Sbjct: 176 SSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM 235
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
++ WN M++G+++ G + AR F+ M E++ ISW+ +I GY Q EA+ +F +MQ
Sbjct: 236 ISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK 295
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E ++P + + + LSACA LGA++ G WIH Y ++ + L +L+DMYAK G+I
Sbjct: 296 EKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDL 355
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +VFE M NK V +W MI GLA+HG +A+D+FS+M+ + PNEITF+ +L+AC H
Sbjct: 356 AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAH 412
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G FN M+ YG+EP+IE YGC++DLLGRAG L EAEK++ +P E A+WG
Sbjct: 413 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 472
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A +G+VELGE + L++LEP NSG Y +LSNIYA GRW E G++RK+M++ G
Sbjct: 473 ALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERG 532
Query: 444 VKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+K PG S I++ + VH+F+ GD SHP +YQ+L K+ +++
Sbjct: 533 IKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQM 578
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/484 (40%), Positives = 308/484 (63%), Gaps = 4/484 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL--GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL + S+ + C+S G YA ++F +P+ +++NT I+ + P
Sbjct: 41 MLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPE 100
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY+ + ++ + Y+FPF+LKA +S +E ++IH + G S+++ +L+
Sbjct: 101 EALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLL 160
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y+ I AR +FD++ R + WN+M+ GY K G++ A +F M E+N+ISW
Sbjct: 161 NVYSKSGDIKSARLLFDQVDQR--DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISW 218
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T++I+G +P EA+ LF RMQ +K D +A+++ L ACA LG ++ G+WIH YI++
Sbjct: 219 TSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKK 278
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ + L LIDMYAK G + +A++VF M+ K V WT MI+G A+HG GREAL+
Sbjct: 279 HEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEW 338
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M+ A V+PN++TF IL+AC H GLV + F M+ +G +P IE YGCM+DLLG
Sbjct: 339 FMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLG 398
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L+EAE+L+ MP + NAAIWG+LL A +I+G++ELG+ + LI+++P + G Y
Sbjct: 399 RAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIH 458
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L++I+A G WN++ ++R+ M++ GV K+PGCS I V+ HEF+AGD SHP + +
Sbjct: 459 LASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHM 518
Query: 479 LCKI 482
L +I
Sbjct: 519 LEQI 522
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 75/363 (20%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS--CKCIYDARKVFDELSL 139
L + + S +E R+IH Q + TGL D + L+ AS + AR VFD +
Sbjct: 21 TLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI-F 79
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
R N +WNTM I GY+ +P EA+ L+
Sbjct: 80 RP-NTFMWNTM-------------------------------IRGYSNSKEPEEALLLYH 107
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M +V + L AC+ + A+E + IH +I + G + + N+L+++Y+KSG
Sbjct: 108 HMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSG 167
Query: 260 KIGK-------------------------------ALQVFENMKNKSVITWTTMIAGLAL 288
I A ++F +M +++I+WT+MI+G
Sbjct: 168 DIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVG 227
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKI 347
G +EAL++F RM+ A +K + + ++ L AC +G+++ G+ + I K I+P +
Sbjct: 228 AGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL 287
Query: 348 EQYGC-MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
GC +ID+ + G L+EA ++ R+M E ++W ++++ I+G G AL+ +
Sbjct: 288 ---GCVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISGYAIHGR---GREALEWFM 340
Query: 407 KLE 409
K++
Sbjct: 341 KMQ 343
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 315/522 (60%), Gaps = 32/522 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSC-SSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+++R +H +S + C ++ FS D+A +F+ P+V+++N IK + +
Sbjct: 55 LVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKL 114
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ Y ++ A RP+ +++P + KA ++ GR+IH V G+ SDVH+ +A
Sbjct: 115 FKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAG 173
Query: 118 IQMYASCKCIYDARKVF--DELSLRVWNVAV--------------------------WNT 149
IQMYAS + DARK+F E + WN + WN
Sbjct: 174 IQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNV 233
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
M+ G AK G+L +AR LF+ M+E++ ISW++++ GY + EA+ +F++MQ E +P
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ + L+AC+ +GA++ G W+H Y+++ + L AL+DMYAK G++ +VFE
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
MK + + TW MI GLA+HG +AL++FS+++ R+KPN IT + +L+AC H G V+
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G R F M+ YG++P++E YGCM+DLLGR+G EAE L+ MP + NAA+WG+LL A
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
I+G+ +L E + L++LEP NSG Y +LSNIYA +GR+++ KIRK+M++ G+K +PG
Sbjct: 474 RIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPG 533
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
S ++++ VHEF GD SHP +Y+ L I +++ A H
Sbjct: 534 VSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGH 575
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 143/369 (38%), Gaps = 95/369 (25%)
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+++++ ++H + +G D +V AL++ YA+
Sbjct: 43 ITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYAN------------------------- 77
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+ + A +F + NV W +I G + ++ +AI + RM V + +P
Sbjct: 78 ------PHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARP 130
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ-- 266
++ AC+ AV+ G IH ++ ++G+ + V + +A I MYA G++ A +
Sbjct: 131 NKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF 190
Query: 267 ----------------------------VFENMKNKSVITWTTMIAGLALHG-LG----- 292
+F M K++ +W MI GLA G LG
Sbjct: 191 YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKL 250
Query: 293 -------------------------REALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
+EAL++F +M+R +P ++L+AC ++G +
Sbjct: 251 FDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAI 310
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ GR +K R I+ ++D+ + G L ++ M E W +++
Sbjct: 311 DQGRWVHAYLK-RNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIG 368
Query: 388 ASNIYGDVE 396
I+G E
Sbjct: 369 GLAIHGRAE 377
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/477 (41%), Positives = 305/477 (63%), Gaps = 2/477 (0%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DYA +F P++++YN+ I+ + +P + Y + + + L PDN ++PF++KA
Sbjct: 64 DYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKAC 123
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ ++++G + H Q + G DSDV+V +L+ MY++ I A VF +S +V
Sbjct: 124 TQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRIS--CLDVVS 181
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W +MVAGY K GD+ +AR LF+ M EKN+++W+ +I+GYA+ ++AI L+ +Q E V
Sbjct: 182 WTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGV 241
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+E M++ +++CA LGA+ELGE H+YI + + + L AL+DMYA+ G I KA+
Sbjct: 242 HANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIW 301
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ + + ++WTT+IAG A+HG +AL+ FSRME+A + P EITF A+LSAC H GL
Sbjct: 302 VFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGL 361
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G F MK Y IEP++E YGCM+DLLGRAG L EAEK + MP + NA IWG+LL
Sbjct: 362 VERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A I+ + E+ E A + LI+L+P +SG Y +LSNIYA +W IR++M++ GV K
Sbjct: 422 GACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVK 481
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
PG + E+ +VH+F GD +HP+ ++ ++ +I G+++ A + N + + D
Sbjct: 482 PPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDID 538
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 131/282 (46%), Gaps = 38/282 (13%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L+ A +F + N+ + + I G++ P+++ + + + + PD + + A
Sbjct: 63 LDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKA 122
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C Q G++++G H I ++G ++ V + N+L+ MY+ G I A VF + V++W
Sbjct: 123 CTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSW 182
Query: 280 TTMIAGLALHGLGREALDMFSRM-------------------------------ERARVK 308
T+M+AG G A +F +M + V
Sbjct: 183 TSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVH 242
Query: 309 PNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
NE ++++++C H+G +ELG R + I++++ + + ++D+ R G + +A
Sbjct: 243 ANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGT--ALVDMYARCGSIDKAI 300
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ ++P +A W +L+A ++G E AL++ ++E
Sbjct: 301 WVFDQLPGR-DALSWTTLIAGFAMHG---YAEKALEYFSRME 338
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 10/294 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G D + ++ + + S+LG A +F S DV + + + ++ + +A
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L++K+ L ++ ++ K S + E++ G+ ++ V+ ++I
Sbjct: 199 RKLFDKMPEKNL----VTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIAS 254
Query: 121 YASCKCIYDARKVFDELSLR---VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
A + + D + LR N+ + +V YA+ G ++ A +F+ + ++ +S
Sbjct: 255 CAHLGALELGERAHDYI-LRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALS 313
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYI 236
WTTLIAG+A +A+ F RM+ + P EI A LSAC+ G VE G E +
Sbjct: 314 WTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMK 373
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
Y + + ++D+ ++GK+ +A + M K + W ++ +H
Sbjct: 374 RDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIH 427
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 314/522 (60%), Gaps = 32/522 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSC-SSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+++R +H +S + C ++ FS D+A +F+ P+V+++N IK + +
Sbjct: 55 LVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKL 114
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ Y ++ A RP+ +++P + KA ++ GR+IH V G+ SDVH+ +A
Sbjct: 115 FKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAG 173
Query: 118 IQMYASCKCIYDARKVF--DELSLRVWNVAV--------------------------WNT 149
I MYAS + DARK+F E + WN + WN
Sbjct: 174 IHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNV 233
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
M+ G AK G+L +AR LF+ M+E++ ISW++++ GY + EA+ +F++MQ E +P
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ + L+AC+ +GA++ G W+H Y+++ + L AL+DMYAK G++ +VFE
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
MK + + TW MI GLA+HG +AL++FS+++ R+KPN IT + +L+AC H G V+
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G R F M+ YG++P++E YGCM+DLLGR+G EAE L+ MP + NAA+WG+LL A
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
I+G+ +L E + L++LEP NSG Y +LSNIYA +GR+++ KIRK+M+D G+K +PG
Sbjct: 474 RIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPG 533
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
S ++++ VHEF GD SHP +Y+ L I +++ A H
Sbjct: 534 VSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGH 575
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 317/524 (60%), Gaps = 34/524 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ +Q+ +L+++FI + S+ DYA +T P+V++YN IK Q+ P+ A
Sbjct: 5 MVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQA 64
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY ++ + + P +Y+FP ++KA +S + +H G DS V V +L+
Sbjct: 65 LELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDF 124
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+S I ++ +VFDE+ R +V W TMV+G +VGD+++A LF++M ++N+ +W T
Sbjct: 125 YSSMGRIEESVRVFDEMPER--DVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNT 182
Query: 181 LIAGYAQMDQPN-------------------------------EAITLFRRMQVENVKPD 209
LI GYA++ + + EA+ +F M + PD
Sbjct: 183 LIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPD 242
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E+ M +SACA LGA++LG+ IH YI Q+G N V + +ALIDMYAK G + ++L +F
Sbjct: 243 EVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFF 302
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
++ K++ W ++I GLA+HG EAL MF +MER ++KPN +TF+++LSAC H GL+E
Sbjct: 303 KLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEE 362
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
GR+ F M + I P +E YGCM+DLL +AG L+EA +L+R M E NA IWG+LL+
Sbjct: 363 GRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGC 422
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-KKMP 448
++ ++E+ + A L+ LEP NSG Y +L N+ A + RW E+ KIR M++ GV K+ P
Sbjct: 423 KLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCP 482
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
G S+IE+ +VH+F A D SH D +Y +L +++GQMK A ++
Sbjct: 483 GSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGYV 526
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/478 (41%), Positives = 304/478 (63%), Gaps = 5/478 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
M+ GL Q+++ +++F+ C S SD YA +F +PD +L+N I+ +D P
Sbjct: 66 MLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEP 125
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+++LY ++ + + Y+FP +LKA LS +E +IH Q G ++DV+ V +L
Sbjct: 126 ERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSL 185
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I YA+ A +FD + + WN+++ GYAK G ++ A LF M EKN IS
Sbjct: 186 INSYAATGNFKLAHLLFDRIPKP--DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAIS 243
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WTT+I+GY Q EA+ LF MQ +V+PD +++ ALSACAQLGA+E G+WIH+Y+
Sbjct: 244 WTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLT 303
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ + L LIDMYAK G +G+AL+VF+N++ KSV WT +I+G A HG GREA+
Sbjct: 304 KTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAIS 363
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F M++ +KPN ITF +L+AC + GLVE G+ F M+ Y ++P IE YGC++DLL
Sbjct: 364 KFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLL 423
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
RAG L EA++ ++ MP + NA IWG+LL A I+ ++ELGE + LI ++P++ G Y
Sbjct: 424 SRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYV 483
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+NI+A+ +W+++ + R++M++ GV K+PGCS I + HEF+AGD SHP+ +++
Sbjct: 484 HKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 541
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/465 (40%), Positives = 299/465 (64%), Gaps = 2/465 (0%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
S G AY +F D+ +N+ I + + A+ +Y +++A +RP+ +
Sbjct: 205 SCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIG 264
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
++ + ++ + LG+E HC GL+ + + AL+ MY C + AR +FD ++ +
Sbjct: 265 MISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK- 323
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ W TMV GYA+ G L+ AR + + EK+V+ W +I+G Q Q EA+ LF M
Sbjct: 324 -TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM 382
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
Q+ ++PD++ M+ LSAC+QLGA+++G WIH+YIE++ L+ V L AL+DMYAK G I
Sbjct: 383 QIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNI 442
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+ALQVFE + ++ +TWT +I GLALHG ++AL FS+M + P+EITF+ +LSAC
Sbjct: 443 ARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC 502
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
CH GLVE GR+YF+ M S++ + PK++ Y CM+DLLGRAG+L+EAE+L++ MP A+AA+
Sbjct: 503 CHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAV 562
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
G+L A +YG+V++GE L++++P +SGNY +L+++Y+ W E+ RK+M D
Sbjct: 563 LGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMND 622
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GV+K PGCS +E++ VHEFV D SHP + +Y+ L + Q+
Sbjct: 623 KGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQL 667
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 201/430 (46%), Gaps = 69/430 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL +N SR + C S DY I + +V+ +N I+ ++ +
Sbjct: 80 MVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIE 139
Query: 59 NAVILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+LY + + L+PDN+++P +LK + LG + + G + D+ V A
Sbjct: 140 GGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNAS 199
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I M SC + A VF++ RV ++ WN+M+ G K G
Sbjct: 200 ITMLLSCGELSVAYDVFNK--SRVRDLVTWNSMITGCVKRG------------------- 238
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
EAI +++ M+ E V+P+EI M+ +S+C+Q+ + LG+ H YI+
Sbjct: 239 ------------LAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK 286
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL------ 291
++GL +PL NAL+DMY K G++ A +F+NM K++++WTTM+ G A G
Sbjct: 287 EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVARE 346
Query: 292 -------------------------GREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
G+EAL +F M+ ++P+++T + LSAC +G
Sbjct: 347 ILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGA 406
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++G + ++ R+ + + ++D+ + G + A ++ +P + N W +++
Sbjct: 407 LDVGIWIHHYIE-RHKLSIDVALGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVI 464
Query: 387 AASNIYGDVE 396
++G+ +
Sbjct: 465 CGLALHGNAQ 474
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 307/490 (62%), Gaps = 15/490 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I L Q+N L+++ ID C DYA +F P+ YLYN I+A T N + +
Sbjct: 11 VIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRAC--THNSMYS 68
Query: 61 VIL---------YNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDS 109
+ + Y Q S + PD ++FPFV+KA +L LG+++H Q G S
Sbjct: 69 LTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKS 128
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFEL 169
+ ALI MY C + DA +FDE+ R WN +++G+ ++G + ARALF+
Sbjct: 129 HLITENALIDMYTKCDNLLDAHNLFDEMHER--GAISWNGIISGHVRLGQMRRARALFDE 186
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M + ++SWT +I+GY ++ +A+ +FR MQ+ ++PDE ++++ L ACA+LGA+E G
Sbjct: 187 MPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETG 246
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+WIH + + GL + NALI+MY K G I +A Q+F+ M+ + VI+W+TMI GLA H
Sbjct: 247 KWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANH 306
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G REA+ +F RM++ +KPN ITF+ +LSAC H G E G YF+ MK + IEP+IE
Sbjct: 307 GKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEH 366
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
YG ++DLLGRAG L +A ++ +MP + ++ IWGSLL++ + ++E+ A++HL +LE
Sbjct: 367 YGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELE 426
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
P ++GNY +LSNIYA LG+W++ ++RK++R +KK PGCS IEV+ EFV+GD S
Sbjct: 427 PDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVSGDDSK 486
Query: 470 PDFDRLYQIL 479
P ++ +L
Sbjct: 487 PYSKEIFWLL 496
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/484 (40%), Positives = 307/484 (63%), Gaps = 4/484 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL--GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL + S+ + C+S G YA ++F +P+ +++NT I+ + P
Sbjct: 41 MLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPE 100
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY+ + ++ + Y+FPF+LKA +S E ++IH + G S+++ +L+
Sbjct: 101 EALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLL 160
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y+ I AR +FD++ R + WN+M+ GY K G++ A +F M E+N+ISW
Sbjct: 161 NVYSKSGDIKSARLLFDQVDQR--DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISW 218
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T++I+G +P EA+ LF RMQ +K D +A+++ L ACA LG ++ G+WIH YI++
Sbjct: 219 TSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKK 278
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ + L LIDMYAK G + +A++VF M+ K V WT MI+G A+HG GREAL+
Sbjct: 279 HEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEW 338
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M+ A V+PN++TF IL+AC H GLV + F M+ +G +P IE YGCM+DLLG
Sbjct: 339 FMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLG 398
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L+EAE+L+ MP + NAAIWG+LL A +I+G++ELG+ + LI+++P + G Y
Sbjct: 399 RAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIH 458
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L++I+A G WN++ ++R+ M++ GV K+PGCS I V+ HEF+AGD SHP + +
Sbjct: 459 LASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHM 518
Query: 479 LCKI 482
L +I
Sbjct: 519 LEQI 522
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 167/363 (46%), Gaps = 75/363 (20%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS--CKCIYDARKVFDELSL 139
L + + S +E R+IH Q + TGL D + L+ AS + AR VFD +
Sbjct: 21 TLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI-F 79
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
R N +WNTM I GY+ +P EA+ L+
Sbjct: 80 RP-NTFMWNTM-------------------------------IRGYSNSKEPEEALLLYH 107
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M +V + L AC+ + A E + IH +I + G + + N+L+++Y+KSG
Sbjct: 108 HMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSG 167
Query: 260 KIGK-------------------------------ALQVFENMKNKSVITWTTMIAGLAL 288
I A ++F +M +++I+WT+MI+G
Sbjct: 168 DIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVG 227
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKI 347
G +EAL++F RM+ A +K + + ++ L AC +G+++ G+ + I K I+P +
Sbjct: 228 AGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL 287
Query: 348 EQYGC-MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
GC +ID+ + G L+EA ++ R+M E ++W ++++ I+G G AL+ +
Sbjct: 288 ---GCVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISGYAIHGR---GREALEWFM 340
Query: 407 KLE 409
K++
Sbjct: 341 KMQ 343
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/487 (41%), Positives = 307/487 (63%), Gaps = 6/487 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ RGL N L + S ++LG D + +F +P+V+ ++ I + Q+ A
Sbjct: 70 LLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRA 129
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
Y+++ + + P+ ++F VLK+ ++E G+ +HCQ + GL SD++V L+ +
Sbjct: 130 FGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA + AR++FD++ R ++ TM+ Y+K+G+L+ AR+LFE M E++V+ W
Sbjct: 186 YARGGDVVCARQLFDKMPER--SLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNV 243
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GYAQ PNE++ LFRRM V P+E+ +LA LSAC QLGA+E G WIH+YIE G
Sbjct: 244 MIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKG 303
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V + ALIDMY+K G + A VF+ +++K V+ W +MI G A+HG + AL +F
Sbjct: 304 IQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFE 363
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M KP +ITFI ILSAC H GLVE GR +F +M+ +YGIEPKIE YGCM++LLGRA
Sbjct: 364 EMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRA 423
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G+L+EA L++ M A+ +WG+LL ++ +++LGE + L+ + NSG Y +LS
Sbjct: 424 GHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLS 483
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N+YA G W K+R +M++ G++K GCS IEV +VHEFVAG+ HP +Y +L
Sbjct: 484 NMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLN 543
Query: 481 KINGQMK 487
+IN +K
Sbjct: 544 EINSWLK 550
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + + GL LN L YA G++ ++ VF +V +++ +I L
Sbjct: 66 IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
A +S+M V+PN TF ++L +C +E G + + + G+ +
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESG-KVLHCQAIKLGLGSDLYVRT 180
Query: 352 CMIDLLGRAGYLQEAEKLLRRMP 374
++D+ R G + A +L +MP
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMP 203
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/476 (40%), Positives = 307/476 (64%), Gaps = 3/476 (0%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
SSLG D AY +F+ + D+ +N+ I Q +P A+ L+ +++ RP+ +
Sbjct: 177 SSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMV 236
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VL A K +E GR G+D ++ + A++ MY C + DAR++FD++ +
Sbjct: 237 GVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK 296
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ W TM+ GYAKVGD + AR +F++M +++ +W LI+ Y Q +P EA+ +FR
Sbjct: 297 --DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRE 354
Query: 201 MQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+Q+ +N KP+E+ + + L+ACAQLGA++LG WIH YI++ G+ + +LIDMY+K G
Sbjct: 355 LQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCG 414
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ KAL+VF +++ + V W+ MIAGLA+HG GR A+D+FS+M+ +VKPN +TF +L
Sbjct: 415 HLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLC 474
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLV+ GR +FN M+ YG+ P + Y CM+D+LGRAG L+EA +L+ +MP +A
Sbjct: 475 ACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSA 534
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
++WG+LL A IYG+VEL E A L++ + +N G Y +LSNIYA G+W+ ++R+ M
Sbjct: 535 SVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHM 594
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
+ G++K PGCS IEV+ +HEF+ GD SHP +Y L +I ++K ++ +E
Sbjct: 595 KVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDE 650
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 221/428 (51%), Gaps = 70/428 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL + ++ +C SS DYA +F +P++Y +NT I+A + P+
Sbjct: 53 MLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPI 112
Query: 59 NAVILYNKIQASALR-PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++++ ++ + R P++Y+FPFV+KA ++S++ G+ IH + SD+ + +L
Sbjct: 113 QGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSL 172
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I Y+S +GDL++A +F + EK+++S
Sbjct: 173 IHFYSS---------------------------------LGDLDSAYLVFSKIVEKDIVS 199
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W ++I+G+ Q P EA+ LF+RM++EN +P+ + M+ LSACA+ +E G W +YIE
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA---------- 287
+ G++ + L+NA++DMY K G + A ++F+ M+ K +++WTTMI G A
Sbjct: 260 RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319
Query: 288 ---------------------LHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVG 325
+G +EAL +F ++ + KPNE+T + L+AC +G
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
++LG + ++ + GI+ +ID+ + G+L++A ++ + + +W ++
Sbjct: 380 AMDLG-GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAM 437
Query: 386 LAASNIYG 393
+A ++G
Sbjct: 438 IAGLAMHG 445
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-PDEIAMLAALS 218
L+ A +F+ + N+ +W TLI +A +P + + +F +M E+ + P+ +
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A ++ ++ G+ IH + + + + ++N+LI Y+ G + A VF + K +++
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVS 199
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +MI+G G EAL +F RM+ +PN +T + +LSAC +E GR + ++
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
R GI+ + M+D+ + G L++A +L +M E + W +++ GD +
Sbjct: 260 -RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKME-EKDIVSWTTMIDGYAKVGDYD 315
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+G+ N H+ + ID S G + A +F + DV++++ I L + A+ L
Sbjct: 394 QGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDL 453
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYA 122
++K+Q + ++P+ +F +L A ++ GR Q G+ A ++ +
Sbjct: 454 FSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILG 513
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
C+ +A ++ +++ + V + +VW ++ G++
Sbjct: 514 RAGCLEEAVELIEKMPI-VPSASVWGALLGACRIYGNV 550
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/494 (39%), Positives = 311/494 (62%), Gaps = 2/494 (0%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
+ L++ +D S DYA IF+ P+++++N I+ + NP A Y + Q
Sbjct: 53 SRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQR 112
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
L PDN +FPF++K+ KL I +G + H + G + DV+V +L+ MYA+
Sbjct: 113 QGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEA 172
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A +F + +V W +M+ G+ K GD+ +AR LF+ M EKN+++W+T+I+GYAQ +
Sbjct: 173 ATLIFQRMYY--VDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNN 230
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
++A+ LF+ +Q + V+ +E M++ +S+CA LGA+ELGE H+Y+ + G+ + L
Sbjct: 231 HFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGT 290
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+DMYA+ G I KA+ VFE++ + ++WT +IAGLA+HG +L F+ M A + P
Sbjct: 291 ALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTP 350
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ITF A+LSAC H GLVE G + F MK + +EP++E YGCM+DLLGRAG L+EAE+
Sbjct: 351 RDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERF 410
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ +MP + NA +WG+LL A I+ + E+GE + LI+L P +SG Y +LSNIYA W
Sbjct: 411 VLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEW 470
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+ ++R++M+ G+KK PG S IE+ RVH+F GD+SHP+ D++ ++ +I +++ A
Sbjct: 471 EKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAA 530
Query: 490 EHLQNEFSGVLESD 503
+ N + + D
Sbjct: 531 GYRGNTADALFDID 544
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 317/526 (60%), Gaps = 41/526 (7%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDY-----AYSIFTHKSKPDVYLYNTTIKALCQT 54
+I+R G Q++++ + S +++ + Y + +F KP+V+L+N IK +
Sbjct: 57 LILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIEN 116
Query: 55 DNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
+ P A++LY ++ + RP+ Y++P VLKA + G ++H V GL D H++
Sbjct: 117 NEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHIL 176
Query: 115 AALIQMYASCKCIYDARKVFD----ELSLRVWN--------------------------- 143
++ I+MYAS + +AR++ D E+ WN
Sbjct: 177 SSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM 236
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
++ WN M++G+++ G + AR F+ M E++ ISW+ +I GY Q EA+ +F +MQ
Sbjct: 237 ISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK 296
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E ++P + + + LSACA LGA++ G WIH Y ++ + L +L+DMYAK G+I
Sbjct: 297 EKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDL 356
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +VFE M NK V +W MI GLA+HG +A+D+FS+M+ + PNEITF+ +L+AC H
Sbjct: 357 AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAH 413
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G FN M+ YG+EP+IE YGC++DLLGRAG L EAEK++ +P E A+WG
Sbjct: 414 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 473
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A +G+VELGE + L++LEP NSG Y +LSNIYA GRW E G++RK+M++ G
Sbjct: 474 ALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERG 533
Query: 444 VKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+K PG S I++ + VH+F+ GD SHP +YQ+L K+ +++
Sbjct: 534 IKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQM 579
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/525 (40%), Positives = 313/525 (59%), Gaps = 60/525 (11%)
Query: 25 FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
F YA +IF H P LYN+ I+AL + PL A+ LY+ + S L+PD+ ++PFV+K
Sbjct: 144 FLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 203
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---V 141
A + S G +H V +G + D ++V++LI +YA+ K + A+++F+ S R
Sbjct: 204 ACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVS 263
Query: 142 WNVAV--------------------------WNTMVAGYAKVGDLNNARALFELMTEKNV 175
WN + WNTM+ GYA VG ++ A+ LF+ M E+N+
Sbjct: 264 WNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL 323
Query: 176 ISWTTLIAG-------------------------------YAQMDQPNEAITLFRRMQVE 204
+SW +++AG YAQ +PNEA+ LF +M+
Sbjct: 324 VSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAV 383
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
VKP E +++ LSACA LGA++ G +H YI + + AL+DMYAK GKI A
Sbjct: 384 GVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLA 443
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
QVF M++K V+ W T+IAG+A+HG +EA +F M+ A V+PN+ITF+AILSAC H
Sbjct: 444 TQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHA 503
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G+V+ G++ + M S YGIEPK+E YGC+IDLL RAG+L+EA +L+ MP E N + G+
Sbjct: 504 GMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGA 563
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL I+G+ ELGE + LI L+P +SG Y +LSNIYA +W+++ K+R +M+ G+
Sbjct: 564 LLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGI 623
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
K+PG S IE+ VH FVAGD SHP+ +++Y+ L +I+ ++K A
Sbjct: 624 SKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 668
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/484 (41%), Positives = 295/484 (60%), Gaps = 5/484 (1%)
Query: 2 IVR-GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
I+R GL +N + R I C S G +YA +F PD Y+YNT + +
Sbjct: 43 IIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLAR 102
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
N + +Y+++ ++ P+ +++P +++A IE G++IH + G +D + LI
Sbjct: 103 NCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLI 162
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY + + + AR+VFD + R +V W +++ GY++ G ++ AR +FELM E+N +SW
Sbjct: 163 HMYVNFQSLEQARRVFDNMPQR--DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSW 220
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+IA Y Q ++ +EA LF RM++ENV D+ + LSAC LGA+E G+WIH YIE+
Sbjct: 221 NAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK 280
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ L +IDMY K G + KA +VF + K + +W MI GLA+HG G A+++
Sbjct: 281 SGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIEL 340
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F MER V P+ ITF+ +LSAC H GLVE G+ YF M G++P +E +GCM+DLLG
Sbjct: 341 FKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLG 400
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L+EA KL+ MP +A + G+L+ A I+G+ ELGE + +I+LEPHNSG Y +
Sbjct: 401 RAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVL 460
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+YA GRW + K+RK+M D GVKK PG S IE V EF+AG +HP +Y
Sbjct: 461 LANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAK 520
Query: 479 LCKI 482
L +I
Sbjct: 521 LDEI 524
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/503 (39%), Positives = 305/503 (60%), Gaps = 12/503 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q++++ ++ + C+ G + +A +F H P+++L+N IKA Q +AV +Y
Sbjct: 38 LSQSSYVATQIVHVCNGHGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYV 97
Query: 66 KIQASALRP---------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
++ P D +++PF+LKA L+ +LGR++H +G +S V +
Sbjct: 98 RMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNS 157
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI+MY C + ARKVFD +R + WNT+++ +A++G + AR LF M +K V+
Sbjct: 158 LIEMYTRCGDLSLARKVFD--GMREKDAVSWNTLISAHARMGQMRKARELFHSMPDKTVV 215
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SWT L++GY + A+ +FR+MQ+E +PD+++++A L ACAQLGA+ELG WI+ Y
Sbjct: 216 SWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYC 275
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
++G+ + + NAL++MYAK G I +ALQ+F M K VI+W+T I GLA HG REA+
Sbjct: 276 NKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAV 335
Query: 297 DMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+F M+R RV PN ITF+ +LSAC H GL++ G RYF+ MK YG+EP +E YGC++D
Sbjct: 336 KLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVD 395
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGR+G +Q A + MP + IWGSLL+A + DV+ A + L++LEP + GN
Sbjct: 396 LLGRSGRIQRALDTIGGMPIPPDGKIWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGN 455
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+L+N+YA GRW RK +R +K PGCS IEV V EFVAG+ P+ +
Sbjct: 456 LVMLANVYAAAGRWGNVASTRKEIRSRSTRKTPGCSMIEVDNVVREFVAGEDLGPELGGI 515
Query: 476 YQILCKINGQMKFAEHLQNEFSG 498
I+ + Q+ E L + G
Sbjct: 516 AAIIDILASQLADDEELVDSDCG 538
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/479 (42%), Positives = 305/479 (63%), Gaps = 2/479 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D++ +L + I S+G S A+ +F D+ +N+ I + P A+ +Y
Sbjct: 184 GFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIY 243
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ ++PD + V+ A +L +++LGREIH +GL+ + +V AL+ MY C
Sbjct: 244 QQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKC 303
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ + +FD ++R V W TM+ GYAK G L+ A LF M EKNV++W +I
Sbjct: 304 GDLEAGKVLFD--NMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGS 361
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Q + EA+ LFR MQ N+KPD++ ML LSAC+QLGA++ G W HNYI+++ L+
Sbjct: 362 CVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLD 421
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V L ALIDMYAK G + KALQVF M ++ +TWT +I GLAL+G +A+ FS+M
Sbjct: 422 VALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMID 481
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ + P+EITF+ +L+ACCH GLVE GR+YF+ MKSR+ + P+ + Y CM++LLGRAG L+
Sbjct: 482 SGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLE 541
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE+L++ MP EA+A +WG+L A I+ ++ +GE A L+ L+PH+SG Y +L+N+Y
Sbjct: 542 EAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYR 601
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
G+W E+ IRK+M + GV+K PG S IEV+ ++EF+ D SHP +++Y+ IN
Sbjct: 602 EAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQIYECFNLIN 660
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 213/429 (49%), Gaps = 69/429 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI+ GL + SR I C S DY I + P+V+ +N I+ +++NP
Sbjct: 76 MILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQ 135
Query: 59 NAVILYNKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++LY ++ A RPDNY++ F+ K L +G EI Q + G D D+++ +
Sbjct: 136 KGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGI 195
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I M S A KVFDE +R ++ WN+++ GY +
Sbjct: 196 IHMLVSVGESGLAHKVFDEGCVR--DLVSWNSLINGYVR--------------------- 232
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
QP EA+ ++++M E+VKPDE+ M+ +SACAQL +++LG IH YIE
Sbjct: 233 ----------RRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIE 282
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL----GR 293
+ GLN + L NAL+DMY K G + +F+NM+ K+V++WTTMI G A +GL G+
Sbjct: 283 ESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGK 342
Query: 294 ---------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGL 326
EAL++F M+ + +KP+++T + LSAC +G
Sbjct: 343 LFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGA 402
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++ G N +K ++ + + +ID+ + G + +A ++ MP N+ W +++
Sbjct: 403 LDTGMWTHNYIK-KHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMP-RRNSLTWTAII 460
Query: 387 AASNIYGDV 395
+YG+V
Sbjct: 461 GGLALYGNV 469
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/504 (40%), Positives = 301/504 (59%), Gaps = 30/504 (5%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ-ASALRPDNYSFPFVLKAV 86
YA +F PDV++YNT I+ L +D P NA+ L+ +++ S PD++SF F+LKA
Sbjct: 57 YARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAA 116
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL---SLRVWN 143
+ G ++HC VG GLDS + V LI MYA C C+ ARKVFDE+ ++ WN
Sbjct: 117 ANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWN 176
Query: 144 VAV--------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
V WN M+AGY K G+L AR +F M K+ +S
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVS 236
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+T+I G+A N+A FR ++ E ++P+E+++ LSACAQ GA E G +H ++E
Sbjct: 237 WSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVE 296
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ G I+ +NNALID Y+K G + A VF+NM +S ++WT MIAG+A+HG G EA+
Sbjct: 297 KSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIR 356
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F+ ME + +KP+ ITFI+IL AC H GLV+LG YF+ M + YGIEP IE YGCM+DL
Sbjct: 357 LFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLY 416
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG LQ+A + +MP N +W +LL A +I+G++ L + L +L+P NSG++
Sbjct: 417 GRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHV 476
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSNIYA+ G+W + +R+ M +KK PG S IEV++ ++ FVAG+ + +Q
Sbjct: 477 LLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQ 536
Query: 478 ILCKINGQMKFAEHLQNEFSGVLE 501
L +I +++ E VL
Sbjct: 537 KLREIMSRLRIEGGYVPEVGSVLH 560
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 124/316 (39%), Gaps = 68/316 (21%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-PDEIAMLAALS 218
L+ AR LF + +V + TLI G + D P+ A+ LF M+ ++V PD + L
Sbjct: 55 LHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLK 114
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------------------- 259
A A A+ G +H YGL++ + + LI MYA+
Sbjct: 115 AAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVA 174
Query: 260 ------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----- 302
+ A QVF M +++ +W M+AG G + A ++F +M
Sbjct: 175 WNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDD 234
Query: 303 --------------------------ERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
R ++PNE++ +LSAC G E GR
Sbjct: 235 VSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGF 294
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
++ + G I +ID + G L A + M +A W +++A ++G
Sbjct: 295 VE-KSGFLQIISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMHG--- 349
Query: 397 LGECALQHLIKLEPHN 412
GE A++ ++E N
Sbjct: 350 YGEEAIRLFNEMEESN 365
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID+ S G D A +F + + + I + A+ L+N+++ S ++PD
Sbjct: 310 LIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPD 369
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDARKVF 134
+ +F +L A ++LG + V T G++ + ++ +Y + A
Sbjct: 370 SITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFV 429
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNA----RALFELMTEKN 174
++ + N VW T++ + G+L A R L EL E +
Sbjct: 430 CQMPISP-NDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENS 472
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/493 (40%), Positives = 308/493 (62%), Gaps = 7/493 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPL 58
+++ GL N LL +F+ S + ++ YS I +KP ++ N+ I+A ++ P
Sbjct: 32 LVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTLFALNSMIRAYSKSLTPH 91
Query: 59 NAVILYNKIQAS--ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ YNKI S + PDNY+F F+++ + S E G +H + G + D HV +
Sbjct: 92 KSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-SACEAGPAVHGALIKHGFEYDPHVESG 150
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI MYA C+ +VF+ S++ ++ TMV+ AK GD+ AR LF+ M +++ +
Sbjct: 151 LIFMYAEMSCLSSCHRVFE--SVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFV 208
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SW +IAGYAQ Q EA+ LF+ MQ++ VK +E++M++ ++AC LGA++ G+W H YI
Sbjct: 209 SWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYI 268
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
E+ + V L AL+DMY K G + +AL+VF M K+V TW+T I GLA++G G++ L
Sbjct: 269 EKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCL 328
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FS M+ + PNEITFI++L C VG V+ GR +F+ MK +GIEP++E YGCM+DL
Sbjct: 329 ELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDL 388
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
GRAG L+EA + MP + +A WG+LL A +Y ++ELGE A + LI++E N G Y
Sbjct: 389 YGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAY 448
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
LSNIYA G W+ +R+ M+ G+ K+PGCS +EV+ VHEF +GD SHP +D +
Sbjct: 449 VSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIE 508
Query: 477 QILCKINGQMKFA 489
+ +I+ ++K A
Sbjct: 509 TMWGEISKRLKLA 521
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/481 (39%), Positives = 307/481 (63%), Gaps = 10/481 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I L Q++ L+++ +D C YA +F +P+ YLYN I+A A
Sbjct: 37 VIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTHNKVYALA 96
Query: 61 VILYNKI-------QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHV 113
++ Y ++ + + PD ++FPFV+K+ L LG+++H G S++ +
Sbjct: 97 ILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITM 156
Query: 114 VAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK 173
ALI MY C + DA KVFD + R + WN++++G+ VG + A ALF+LM +
Sbjct: 157 ENALIDMYTKCASLLDAHKVFDGMVER--DAISWNSIISGHVGVGQMRKAGALFDLMPYR 214
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
++SWT +I+GY ++ +A+ +FR+MQ+ V+PDEI++++ L ACAQLGA+E+G+WIH
Sbjct: 215 TIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIH 274
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
Y ++ GL + NAL++MY+K G IG+A Q+F+ M VI+W+TMI GLA HG R
Sbjct: 275 MYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAR 334
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
EA+++F RM++A+++PN ITF+ +LSAC H G G YF+ M Y IEP++E YGC+
Sbjct: 335 EAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCL 394
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNS 413
+D+LGRAG L +A ++ +MP + ++ IWGSLL++ + ++++ A++HL +LEP ++
Sbjct: 395 VDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDT 454
Query: 414 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFD 473
GNY +LSNIYA L +W+ ++RK+++ +KK PG S I+++ V EFV+ D S P F
Sbjct: 455 GNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEFVSWDDSKP-FS 513
Query: 474 R 474
R
Sbjct: 514 R 514
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 113/251 (45%), Gaps = 27/251 (10%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH ++ +Y L+ L ++D+ K+ +G A +F+ +K + + MI + +
Sbjct: 33 IHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTHNKV 92
Query: 292 GREALDMFSRMERAR-------VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
A+ + M R + + P+ TF ++ +C + LG++ + ++G +
Sbjct: 93 YALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHL-CKFGPK 151
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC-ALQ 403
I +ID+ + L +A K+ M E +A W S+++ G V +G+
Sbjct: 152 SNITMENALIDMYTKCASLLDAHKVFDGM-VERDAISWNSIIS-----GHVGVGQMRKAG 205
Query: 404 HLIKLEPHNS-GNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY-- 452
L L P+ + ++ + + Y LG + ++ + + M+ +GV+ +P C+
Sbjct: 206 ALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLG 265
Query: 453 -IEVSKRVHEF 462
+EV K +H +
Sbjct: 266 ALEVGKWIHMY 276
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/500 (41%), Positives = 305/500 (61%), Gaps = 5/500 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G D + + + I S G A +F D+ +N+ I + A
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEA 240
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
LY K+ + PD + V+ A +L + LGR++H GL+ V + AL+ M
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y CK I A+ +F+ ++ + V W TMV GYAK G L +A LF M EK+V+ W
Sbjct: 301 YIKCKNIEAAKILFENMTKK--TVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNA 358
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI G+ Q + EA+ LF MQ +V PD+I ++ LSAC+QLGA+++G W+H+Y++++
Sbjct: 359 LIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHN 418
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L V L AL+DMYAK G I KA+QVFE M ++ +TWT +I GLALHG A+ FS
Sbjct: 419 LTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFS 478
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M + P+EITFI +LSACCH GLV+ GR YF M S+YGI PK++ Y C++DLLGRA
Sbjct: 479 EMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRA 538
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G+L+EAE+L+R MPFE +A +WG+L S I+G+V +GE A L++L+PH+ G Y +L+
Sbjct: 539 GFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLA 598
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N+Y W ++ K+RK+M + GV+K PGCS IE++ V++F+ D SHP +++Y+ L
Sbjct: 599 NMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLT 658
Query: 481 KINGQMKFAE---HLQNEFS 497
++ Q++ E L EFS
Sbjct: 659 RLTRQIEVIEVDPSLFKEFS 678
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 69/427 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI GL + LSR + C+ + DY I + + +V+ +N I+ +++NP+
Sbjct: 77 MISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPI 136
Query: 59 NAVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
NAV+LY N ++ + PDNY++P + K S EI + G DSD+ V A+
Sbjct: 137 NAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAI 196
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I + SC + ARK+FDE +R ++ WN+++ GY + G
Sbjct: 197 IHVLVSCGELLAARKLFDESCVR--DLVSWNSIINGYVRCG------------------- 235
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
+EA L+ +M NV PDE+ M+ +SA AQL + LG +H IE
Sbjct: 236 ------------LADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL------ 291
+ GLN VPL NAL+DMY K I A +FENM K+V++WTTM+ G A GL
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343
Query: 292 -------------------------GREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+EAL +F M+ + V P++IT + LSAC +G
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++G + + ++ + + ++D+ + G +++A ++ MP N+ W +++
Sbjct: 404 LDVG-IWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAII 461
Query: 387 AASNIYG 393
++G
Sbjct: 462 CGLALHG 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 34/302 (11%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
+EIH Q + TGL SD ++ L+ A ++ W + Y
Sbjct: 71 KEIHAQMISTGLISDGFALSRLVAFCA---------------------ISEWRNL--DYC 107
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAML 214
LNNA L NV SW I GY + + P A+ L+R M + + PD
Sbjct: 108 D-KILNNAANL-------NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
CA I ++ Q G ++ + ++NA+I + G++ A ++F+ +
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVR 219
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+++W ++I G GL EA D++ +M V P+E+T I ++SA + + LGR+
Sbjct: 220 DLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLH 279
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
++ G+ + ++D+ + ++ A+ L M + W +++ +G
Sbjct: 280 QSIE-EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMT-KKTVVSWTTMVIGYAKFGL 337
Query: 395 VE 396
+E
Sbjct: 338 LE 339
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/500 (41%), Positives = 305/500 (61%), Gaps = 5/500 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G D + + + I S G A +F D+ +N+ I + A
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEA 240
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
LY K+ + PD + V+ A +L + LGR++H GL+ V + AL+ M
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y CK I A+ +F+ ++ + V W TMV GYAK G L +A LF M EK+V+ W
Sbjct: 301 YIKCKNIEAAKILFENMTKK--TVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNA 358
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI G+ Q + EA+ LF MQ +V PD+I ++ LSAC+QLGA+++G W+H+Y++++
Sbjct: 359 LIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHN 418
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L V L AL+DMYAK G I KA+QVFE M ++ +TWT +I GLALHG A+ FS
Sbjct: 419 LTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFS 478
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M + P+EITFI +LSACCH GLV+ GR YF M S+YGI PK++ Y C++DLLGRA
Sbjct: 479 EMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRA 538
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G+L+EAE+L+R MPFE +A +WG+L S I+G+V +GE A L++L+PH+ G Y +L+
Sbjct: 539 GFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLA 598
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N+Y W ++ K+RK+M + GV+K PGCS IE++ V++F+ D SHP +++Y+ L
Sbjct: 599 NMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLT 658
Query: 481 KINGQMKFAE---HLQNEFS 497
++ Q++ E L EFS
Sbjct: 659 RLTRQIEVIEVDPSLFKEFS 678
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 204/427 (47%), Gaps = 69/427 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI GL + LSR + C+ + DY I + + + + +N I+ +++NP+
Sbjct: 77 MISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPI 136
Query: 59 NAVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
NAV+LY N ++ + PDNY++P + K S EI + G DSD+ V A+
Sbjct: 137 NAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAI 196
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I + SC + ARK+FDE +R ++ WN+++ GY + G
Sbjct: 197 IHVLVSCGELLAARKLFDESCVR--DLVSWNSIINGYVRCG------------------- 235
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
+EA L+ +M NV PDE+ M+ +SA AQL + LG +H IE
Sbjct: 236 ------------LADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL------ 291
+ GLN VPL NAL+DMY K I A +FENM K+V++WTTM+ G A GL
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343
Query: 292 -------------------------GREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+EAL +F M+ + V P++IT + LSAC +G
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++G + + ++ + + ++D+ + G +++A ++ MP N+ W +++
Sbjct: 404 LDVG-IWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAII 461
Query: 387 AASNIYG 393
++G
Sbjct: 462 CGLALHG 468
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 34/302 (11%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
+EIH Q + TGL SD ++ L+ A ++ W + Y
Sbjct: 71 KEIHAQMISTGLISDGFALSRLVAFCA---------------------ISEWRNL--DYC 107
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAML 214
LNNA L N SW I GY + + P A+ L+R M + + PD
Sbjct: 108 D-KILNNAANL-------NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
CA I ++ Q G ++ + ++NA+I + G++ A ++F+ +
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVR 219
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+++W ++I G GL EA D++ +M V P+E+T I ++SA + + LGR+
Sbjct: 220 DLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLH 279
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
++ G+ + ++D+ + ++ A+ L M + W +++ +G
Sbjct: 280 QSIE-EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMT-KKTVVSWTTMVIGYAKFGL 337
Query: 395 VE 396
+E
Sbjct: 338 LE 339
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/475 (40%), Positives = 298/475 (62%), Gaps = 3/475 (0%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQT-DNPLNAVILY 64
L Q+N L+++ +D C +L DYA IF P+V+ YN I+ +PL +
Sbjct: 35 LSQSNFLVTKMLDLCDNLSHVDYATMIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFN 94
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ + PD ++FPFV+K+ L LG+++H G + ALI MY C
Sbjct: 95 QMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKC 154
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A +V++E++ R + WN++++G+ ++G + +AR +F+ M + ++SWTT+I G
Sbjct: 155 GDMSGAYQVYEEMTER--DAVSWNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMING 212
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YA+ +A+ +FR MQV ++PDEI++++ L ACAQLGA+E+G+WIH Y E+ G
Sbjct: 213 YARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKN 272
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ NAL++MYAK G I +A +F M K VI+W+TMI GLA HG G A+ +F M++
Sbjct: 273 AGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQK 332
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
A V PN +TF+ +LSAC H GL G RYF++M+ Y +EP+IE YGC++DLLGR+G ++
Sbjct: 333 AGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVE 392
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
+A + +MP + ++ W SLL++ I+ ++E+ A++ L+KLEP SGNY +L+NIYA
Sbjct: 393 QALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYA 452
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
L +W +RK++R +KK PGCS IEV+ V EFV+GD S P ++ IL
Sbjct: 453 KLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVNNLVQEFVSGDDSKPFSQEVFWIL 507
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/477 (41%), Positives = 306/477 (64%), Gaps = 5/477 (1%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q+N L+++ +DSC +LG YA +F P+++ YN I+ + +A+ ++
Sbjct: 38 LSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFV 97
Query: 66 KI---QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ +++ PD ++FPFV+K+ + LG ++H G D ALI MY
Sbjct: 98 QMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYT 157
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ +A KVF+E+S R +V WN+++ GY K+G +N+AR LF+ M + ++SWTT+I
Sbjct: 158 KFGDLTNACKVFEEMSHR--DVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMI 215
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
GY +M +A+ +FR MQ+ ++PDEI+++A L ACAQLGA+E+G+WIH Y ++ G
Sbjct: 216 TGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFL 275
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ NALI+MYAK G I +A +F+ + K VI+W+TMI GLA HG G EA+ +F M
Sbjct: 276 RKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEM 335
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ RV PNEITF+ +L AC H GL + G +YF++M + Y IEP+IE YGC+IDLLGR+G
Sbjct: 336 CKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGC 395
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L +A + +MP + ++ IW SLL++ I+ ++++ A++ L++LEP SGNY +L+N+
Sbjct: 396 LGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANM 455
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
YA G+W + IRK++R+ +KK PG S IEV+ V EFV+ D S P ++ IL
Sbjct: 456 YAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWIL 512
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/480 (40%), Positives = 306/480 (63%), Gaps = 4/480 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
++ +G ++ +SR + + +S+ FS+ YA +F S P+ ++NT I+A +++P
Sbjct: 34 LLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPE 93
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY+++ ++ + Y+FPF+LKA LS + +IH Q + G S+V+ +L+
Sbjct: 94 EALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLL 153
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
++YA I A +FD L R ++ WNTM+ GY K G++ A +F+ M EKNVISW
Sbjct: 154 RVYAISGSIKSAHVLFDLLPSR--DIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISW 211
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T++I G+ + EA+ L ++M V +KPD+I + +LSACA LGA+E G+WIH YI +
Sbjct: 212 TSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGK 271
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ L ALIDMY K G++ KAL VF ++ K V TWT +I G A+HG G EALD
Sbjct: 272 NKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDW 331
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F++M++A +KP TF A+L+AC H GLVE G+ F M + Y ++P +E YGCM+DLLG
Sbjct: 332 FTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLG 391
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG+L+EA++ + MP + NAAIWGSLL A +++ +ELG+ + LI+L+P + G Y
Sbjct: 392 RAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIH 451
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L++I+A G W+E+ ++R +++ G+ +PGCS I ++ HEF AG HP +Y +
Sbjct: 452 LASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHPHVREMYDM 511
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/493 (39%), Positives = 311/493 (63%), Gaps = 6/493 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+ V G +++HL+ +F+ + S + DYA I KP ++ N+ I+A C++ P
Sbjct: 37 LYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKPTLFALNSMIRAHCKSPVPE 96
Query: 59 NAVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ Y++I +S L+PDNY+ F+++A L E G ++H T+ G D+D HV
Sbjct: 97 KSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTG 156
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI +YA C+ KVF+ +S + MV A+ GD+ AR LFE M EK+ I
Sbjct: 157 LISLYAELGCLDSCHKVFNSVSYP--DFVCRTAMVTACARCGDVAFARKLFEGMPEKDPI 214
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+W +I+GYAQ+ + EA+ LF MQ+E VK + ++M++ LSAC QLGA++ G W H+YI
Sbjct: 215 AWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYI 274
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
E+ + V L L+D+YAK G + KA++VF M+ K+V TW++ + GLA++G G + L
Sbjct: 275 ERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 334
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+FS M++ V PN +TF+++L C VG V+ G+++F+ M++ +GIEP+++ YGC++DL
Sbjct: 335 KLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDL 394
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
RAG L++A ++++MP +A+AA+W SLL AS +Y ++ELG A + +++LE N G Y
Sbjct: 395 YARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAY 454
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSNIYA W+ +R+ M+ GV+K PGCS +EV+ VHEF GD SHP ++ +
Sbjct: 455 VLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEID 514
Query: 477 QILCKINGQMKFA 489
+ I+ +++ A
Sbjct: 515 AVWKDISRRLRLA 527
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 226/417 (54%), Gaps = 33/417 (7%)
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
RP+ +F ++ A V E G IH + +G+ +V VV AL+ +Y
Sbjct: 632 GFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYG-------- 683
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
K GDL ++ LFE ++ KN++SW T+I + Q
Sbjct: 684 -------------------------KTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGL 718
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
E + F + +KPD+ LA L C +G V L + IH I G N + A
Sbjct: 719 AEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTA 778
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
L+D+YAK G++ + VF + + + WT M+A A HG GR+A+ F M + P+
Sbjct: 779 LLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPD 838
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+TF +L+AC H GLVE GR YF M RY IEP+++ Y CM+DL+GR+G LQ+A L+
Sbjct: 839 HVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLI 898
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
+ MP E ++ +WG+LL A +Y D +LG A + L +LEP + NY +LSNIY+ G W
Sbjct: 899 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWK 958
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++ +IR +M+ G+ + G SYIE ++H+FV GD SHP+ +++ + L +I +MK
Sbjct: 959 DASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 1015
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 6/210 (2%)
Query: 197 LFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L R M+ E +P+E+ L+ +SAC G E G IH + + G+ V + NAL+++Y
Sbjct: 623 LSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLY 682
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K+G + + ++FE++ K++++W TMI +GL E L F+ +KP++ TF+
Sbjct: 683 GKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFL 742
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
A+L C +G+V L + ++ G ++DL + G L+++ + +
Sbjct: 743 AVLRVCEDIGVVRLSQGIHGLIMF-CGFNANTCITTALLDLYAKLGRLEDSSTVFLEIT- 800
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHL 405
++ W ++LAA +G G A++H
Sbjct: 801 SPDSMAWTAMLAAYATHG---YGRDAIKHF 827
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 42/314 (13%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F S ++ +NT I Q + +N + L+PD +F VL+ +
Sbjct: 694 LFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGV 753
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ L + IH + G +++ + AL+ +YA
Sbjct: 754 VRLSQGIHGLIMFCGFNANTCITTALLDLYA----------------------------- 784
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
K+G L ++ +F +T + ++WT ++A YA +AI F M + PD +
Sbjct: 785 ----KLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHV 840
Query: 212 AMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
L+AC+ G VE G + + ++Y + + + ++D+ +SG + A + +
Sbjct: 841 TFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKE 900
Query: 271 MK-NKSVITWTTMIAGLALHG---LGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
M S W ++ ++ LG +A +E R N I I SA GL
Sbjct: 901 MPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELE-PRDGRNYIMLSNIYSAS---GL 956
Query: 327 VELGRRYFNIMKSR 340
+ R N+MK +
Sbjct: 957 WKDASRIRNLMKQK 970
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 302/476 (63%), Gaps = 6/476 (1%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L RF +C L ++ +F S DV +N+ I A Q + P +A+ L+ K++ +
Sbjct: 167 LVRFYGACGDLSMAE---RLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENV 223
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P++ + VL A K +E GR + G+ D+ + A++ MY C + DA+K
Sbjct: 224 MPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQK 283
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FDE+ R +V W M+ GYAK+GD + AR +F M K + +W LI+ Y Q +P
Sbjct: 284 LFDEMPER--DVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPK 341
Query: 193 EAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA+ +F +Q+ + KPDE+ +++ LSACAQLGA++LG WIH YI++ G+ L ++L
Sbjct: 342 EALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSL 401
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+DMYAK G + KAL+VF +++ + V W+ MIAGL +HG G+ A+D+F M+ A+VKPN
Sbjct: 402 VDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNS 461
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF +L AC H GLV+ GR +F+ M+ YG+ P+++ Y CM+D+LGRAG+L+EA +L+
Sbjct: 462 VTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELIN 521
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
M +A++WG+LL A +++ +VELGE A L+KLEP N G +LSNIYA GRW +
Sbjct: 522 EMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEK 581
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++RK+MRD +KK PGCS IE + VHEF+ GD +HP +Y L +I ++K
Sbjct: 582 VSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLK 637
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 205/406 (50%), Gaps = 68/406 (16%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA-VILYNKIQASALRPDNYSF 79
SS DYA ++F +P++Y +NT I+A + +P + VI + + P+ ++F
Sbjct: 70 SSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTF 129
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
PFV+KA +L +G +H + D++++ +L++ Y +C
Sbjct: 130 PFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGAC--------------- 174
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
GDL+ A LF+ ++ K+V+SW ++I+ +AQ + P +A+ LF
Sbjct: 175 ------------------GDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFL 216
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+M+ ENV P+ + M+ LSACA+ +E G W+ +YIE+ G+ + L NA++DMY K G
Sbjct: 217 KMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCG 276
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLA-------------------------------L 288
+ A ++F+ M + V +WT M+ G A
Sbjct: 277 SVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQ 336
Query: 289 HGLGREALDMFSRMERARV-KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G +EAL +F+ ++ +++ KP+E+T ++ LSAC +G ++LG + ++ R GI
Sbjct: 337 NGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREGIVLNC 395
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
++D+ + G L++A ++ + E + +W +++A ++G
Sbjct: 396 HLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHG 440
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 148/317 (46%), Gaps = 36/317 (11%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L + K S+ + +E+H + + TGL D + A K+F +L
Sbjct: 28 ILSTIDKCSSSKQLKEVHARMLRTGLFFDP----------------FSASKLFTASALSS 71
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++ L+ AR LF+ + + N+ +W TLI YA P ++ +F +
Sbjct: 72 FST---------------LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDL 116
Query: 202 --QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+ E++ P++ + A ++L A +G +H + + + N+L+ Y G
Sbjct: 117 LDKCEDL-PNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACG 175
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A ++F+ + K V++W +MI+ A +AL++F +MER V PN +T + +LS
Sbjct: 176 DLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLS 235
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC +E GR + ++ R GI+ + M+D+ + G + +A+KL MP E +
Sbjct: 236 ACAKKLDLEFGRWVCSYIE-RKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDV 293
Query: 380 AIWGSLLAASNIYGDVE 396
W +L GD +
Sbjct: 294 FSWTIMLDGYAKMGDYD 310
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
G+ N HL+S +D + G + A +F + DVY+++ I L A+ L
Sbjct: 389 EGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDL 448
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYA 122
+ ++Q + ++P++ +F VL A ++ GR H G+ ++ A ++ +
Sbjct: 449 FFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILG 508
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
+ +A ++ +E+S + +VW ++
Sbjct: 509 RAGFLEEAMELINEMS-TTPSASVWGALLGA 538
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/482 (41%), Positives = 295/482 (61%), Gaps = 2/482 (0%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
LSR C+ YA IF +V +NT +++ + D+P +A+ L+ +++ +
Sbjct: 50 LSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDI 109
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD+Y+ FVLKA +L + G+ +H GL S++ + ++ +YA C I ARK
Sbjct: 110 SPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARK 169
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD++ R +V WN M+A K+GD A LF M E+NV SWT++I GYAQ +
Sbjct: 170 VFDKMPQR--DVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSK 227
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EAI LF M+ + P+E+ ++A L ACA +G + LG IH++ + G + + N LI
Sbjct: 228 EAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLI 287
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY K G + A ++F+NM+ ++V++W+ MIAGLA HG +AL +F++M VKPN +
Sbjct: 288 DMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAV 347
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TFI IL AC H+G+VE GR+YF M YGI P+IE YGCM+DL RAG LQEA + +
Sbjct: 348 TFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMN 407
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP N +WG+LL ++ +++L E A +HL KL+P N G Y +LSNIYA GRW +
Sbjct: 408 MPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDV 467
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
++RK+MRD GVKK PG S I V V+ FVAGD +HP + ++Q K+ +MK ++
Sbjct: 468 ARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYV 527
Query: 493 QN 494
N
Sbjct: 528 PN 529
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/489 (40%), Positives = 305/489 (62%), Gaps = 10/489 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q+++L ++ + C++ G +A +F+ +P+++L+N IKA Q L+A+ +Y
Sbjct: 41 LSQSSYLATQIVHLCNAHGRVAHATRVFSQVREPNLHLHNAMIKAYAQNHRHLDAITVYI 100
Query: 66 KIQASALRP-------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ P D +++PF+LKA L ++LG+++H V +G +S+ V +LI
Sbjct: 101 RMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLI 160
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+MY + ARKVFD + R +V WNT+++ +A++G + ARA+F M +K V+SW
Sbjct: 161 EMYTRAGDLVLARKVFDGMQER--DVVSWNTVISAHARLGQMRKARAVFNSMPDKTVVSW 218
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T L++GY + A+ FR MQ+E +PD+++++A L ACAQLGA+ELG WI+ Y +
Sbjct: 219 TALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNR 278
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ + + NAL++MYAK G I +ALQ+F M K VI+W+TM+ GLA HG +EA+ +
Sbjct: 279 HQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDVISWSTMVGGLAAHGRAQEAVQL 338
Query: 299 FSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F+ MER VKPN ITF+ +LSAC H GL++ G YF+ M YGIEP +E YGC++DLL
Sbjct: 339 FTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLL 398
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
R+G +Q L+ MP A+A IWGS+L A +GDV+ A + L+ LEP + GN
Sbjct: 399 CRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGDVDTAVLAAERLVALEPEDVGNLV 458
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+L+N+YA RW+E RK +R ++K PGCS IEV V EFVAG+ P+F L
Sbjct: 459 MLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSLIEVDNVVQEFVAGEDLKPEFGGLSG 518
Query: 478 ILCKINGQM 486
+L + Q+
Sbjct: 519 VLDILASQL 527
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E A++A+L ACA + +H + + L+ L ++ + G++ A +VF
Sbjct: 13 EDAVMASLRACASFRDLLR---VHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFS 69
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 322
++ ++ MI A + +A+ ++ RM R R P + T+ +L AC
Sbjct: 70 QVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACG 129
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
+ ++LG++ + R G E +I++ RAG L A K+ M E + W
Sbjct: 130 GLMALDLGKQVHGHV-VRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQ-ERDVVSW 187
Query: 383 GSLLAA 388
++++A
Sbjct: 188 NTVISA 193
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/486 (40%), Positives = 299/486 (61%), Gaps = 17/486 (3%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + + + I S G D A +F D+ +N+ I + A+ Y
Sbjct: 109 GFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFY 168
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ ++PD + V+ + +L ++LGRE HC GL V + AL+ MY C
Sbjct: 169 REMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKC 228
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ ARK+FD ++ + + W TM LF+ M +K+V+ W +I G
Sbjct: 229 GNLESARKLFDSMTNKT--MVSWTTM---------------LFDEMPDKDVVPWNAMIGG 271
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y ++ EA+ LF MQ N+ PDE+ M++ LSAC+QLGA+++G WIH+YIE++ L+
Sbjct: 272 YVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLN 331
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V L ALIDMYAK GKI KA+QVF+ + ++ +TWT +I+GLALHG A+ FS M
Sbjct: 332 VALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMID 391
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V P+E+TF+ +LSACCH GLVE GR+YF+ M S++ + PK++ Y CM+DLLGRAG L+
Sbjct: 392 NSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLE 451
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE+L++ MP EA+A +WG+L A I+G+V +GE A L++++PH+SG Y +L+N+Y
Sbjct: 452 EAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYG 511
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
W E+GK RK+MR GV+K PGCS IEV+ V+EF+ D SHP +++Y+ L ++
Sbjct: 512 EAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTR 571
Query: 485 QMKFAE 490
Q++ E
Sbjct: 572 QLELVE 577
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 218/413 (52%), Gaps = 54/413 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++ GL ++ SR I C+ + D Y +I + P+ + +N I+ ++NP
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60
Query: 59 NAVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
AV+LY ++ Q +PDNY++P + KA +LS I +G EI + G DSD+ V A+
Sbjct: 61 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I + SC + ARK+FD+ +R ++ WN+M+ GY + G
Sbjct: 121 IHLLVSCGDLDGARKMFDKSCVR--DLVSWNSMINGYVRRG------------------- 159
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W EA+ +R M+VE +KPDE+ M+ +S+CAQL ++LG H YIE
Sbjct: 160 WAY------------EALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIE 207
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT---------------- 281
+ GL VPL NAL+DMY K G + A ++F++M NK++++WTT
Sbjct: 208 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNA 267
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
MI G G+EAL +F+ M+ + P+E+T ++ LSAC +G +++G + ++ ++
Sbjct: 268 MIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE-KH 326
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ + +ID+ + G + +A ++ + +P N+ W ++++ ++G+
Sbjct: 327 ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 378
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/478 (41%), Positives = 302/478 (63%), Gaps = 4/478 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPL 58
++ +G +N +S + S + + + AY+ +F S P+ ++NT ++A +++P
Sbjct: 33 LLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWNTMLRAYSNSNDPE 92
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY+++ +++ ++Y+FPF+LKA LS E ++IH + G +V+ +L+
Sbjct: 93 AALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLL 152
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
++YA I A +F++L R ++ WN M+ GY K G+L+ A +F+ M EKNVISW
Sbjct: 153 RVYAISGNIQSAHVLFNQLPTR--DIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISW 210
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
TT+I G+ ++ EA++L ++M V +KPD I + +LSACA LGA+E G+WIH YIE+
Sbjct: 211 TTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEK 270
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ L L DMY K G++ KAL VF ++ K V WT +I GLA+HG GREALD
Sbjct: 271 NEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAIHGKGREALDW 330
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F++M++A + PN ITF AIL+AC H GL E G+ F M S Y I+P +E YGCM+DL+G
Sbjct: 331 FTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMG 390
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L+EA + + MP + NAAIWG+LL A ++ ELG+ + LI+L+P +SG Y
Sbjct: 391 RAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYIH 450
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
L++IYA G WN+ ++R ++ G+ PGCS I ++ VHEF AGD SHP +Y
Sbjct: 451 LASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGVVHEFFAGDGSHPHIQEIY 508
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/479 (41%), Positives = 303/479 (63%), Gaps = 7/479 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + ++ + ID + L +D +F DV +N I + +A+ ++
Sbjct: 167 GLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVF 226
Query: 65 NKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++Q S L PD + L A L +ELG++IH V + + AL+ MY
Sbjct: 227 CRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH-HYVRDNVKFTPIIGNALLDMYCK 285
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C+ AR VF+E+ + NV W TMV+GYA G+L AR LFE ++V+ WT +I
Sbjct: 286 CGCLSIARAVFEEMPSK--NVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMIN 343
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q ++ +EA+ LFR MQ+ VKPD+ +++ L+ CAQ GA+E G+WIH +I++ +
Sbjct: 344 GYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPI 403
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ ALI+MYAK G I KAL++F ++ K +WT++I GLA++G +AL++FS+M+
Sbjct: 404 DAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMK 463
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+A V+P++ITFI +LSAC H GLVE GR++FN M+ Y I+PK+E YGC++DLLGRAG L
Sbjct: 464 QAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLL 523
Query: 364 QEAEKLLRRMPFEANA---AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
EAE+L++++P E A ++GSLL+A IYG+VE+GE + L+K E +S + +L+
Sbjct: 524 NEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLA 583
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
NIYA RW + K+R+ M+D+GVKK PGCS IEV +HEF +G SHP+ +Y +L
Sbjct: 584 NIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYML 642
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 72/424 (16%)
Query: 5 GLDQNNHLLSRFIDSCSSL--GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL Q+ L++ + C+ G +YA +F + P + +YN IKA + N ++
Sbjct: 64 GLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLV 123
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L++K++ L PDN+++PFV KA+ L + ++ TGL+ D +V +LI MYA
Sbjct: 124 LFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYA 183
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ +FDE+ R +V WN M++GY K FE
Sbjct: 184 QLALTDVMKMLFDEMPDR--DVISWNVMISGYVKC-------RRFE-------------- 220
Query: 183 AGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+AI +F RMQ E+ + PDE +++ LSAC L +ELG+ IH+Y+
Sbjct: 221 ----------DAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVK 270
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG----------- 290
T + + NAL+DMY K G + A VFE M +K+VI WTTM++G A G
Sbjct: 271 FTPI-IGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEG 329
Query: 291 ------------------LGR--EALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
R EA+ +F M+ +VKP++ +++L+ C G +E G
Sbjct: 330 SPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQG 389
Query: 331 RRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
+ + ++R I+ + +I++ + G++++A ++ + + A+ W S++
Sbjct: 390 KWIHEFIDENRIPIDAVVGT--ALIEMYAKCGFIEKALEIFYGLRVKDTAS-WTSIICGL 446
Query: 390 NIYG 393
+ G
Sbjct: 447 AMNG 450
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 165/363 (45%), Gaps = 23/363 (6%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
G+LN A +F+ + ++ + +I +A+ + LF +++ + + PD
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
A LG V E + + + GL + N+LIDMYA+ +F+ M ++ VI
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVI 204
Query: 278 TWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+W MI+G +A+++F RM E + + P+E T ++ LSAC + +ELG++ +
Sbjct: 205 SWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY 264
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
++ P I ++D+ + G L A + MP N W ++++ G++E
Sbjct: 265 VRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMP-SKNVICWTTMVSGYANCGELE 321
Query: 397 LGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNES------GKIRKVMRD--MGVKKM 447
+ L + P + + + N Y R++E+ +IRKV D + V +
Sbjct: 322 ----EARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLL 377
Query: 448 PGCSY---IEVSKRVHEFVAGDTSHPDFDRLY-QILCKINGQMKFAEHLQNEFSGVLESD 503
GC+ IE K +HEF+ D + D + L ++ + F E F G+ D
Sbjct: 378 TGCAQTGAIEQGKWIHEFI--DENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKD 435
Query: 504 VAS 506
AS
Sbjct: 436 TAS 438
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/504 (40%), Positives = 300/504 (59%), Gaps = 38/504 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL + SR I S S+ + YA+SIF+ P+ Y++NT I+A + P A+
Sbjct: 34 GLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAAL 93
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+++++ +++ PD Y+F F LK+ S +E GR+IH + TGL D+ + LI +Y
Sbjct: 94 TIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLY 153
Query: 122 ASCKCIYDARKV-------------------------------FDELSLRVWNVAVWNTM 150
ASC CI DAR + FDE++ R NV WN M
Sbjct: 154 ASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTER--NVESWNFM 211
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++GY VG L AR +F KNV+SW +I GY+ + +E + LF MQ VKPD
Sbjct: 212 ISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDN 271
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+++ LSACA +GA+ GEW+H YI++ G++ + AL+DMY+K G I KAL+VF +
Sbjct: 272 CTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNS 331
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
K + TW ++I+GL+ HG G+ AL +FS M KPNE+TF+ +LSAC GL++ G
Sbjct: 332 CLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEG 391
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
R FN+M +GI+P IE YGCM+DLLGR G L+EAE+L+++MP + + +W SLL A
Sbjct: 392 REMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACR 451
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
+G+VEL E Q L++L P S ++ LSN+YA +GRW + ++R+ MR GV+K PGC
Sbjct: 452 NHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGC 511
Query: 451 SYIEVSKRVHEFVAGD--TSHPDF 472
S IEV V+EF+AG+ S DF
Sbjct: 512 SMIEVDGTVYEFLAGEGLVSGKDF 535
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/502 (40%), Positives = 303/502 (60%), Gaps = 11/502 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q++++ ++ + C++ G + +A +F P+++L+N IKA Q +AV +Y
Sbjct: 38 LSQSSYVATQIVHICNAHGRAAHAARVFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYV 97
Query: 66 KIQASALRP--------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++ P D +++PF+LKA L+ LGR++H +G +S V +L
Sbjct: 98 RMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASRLGRQVHAHVARSGCESHAVVQNSL 157
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I+MY C + ARK FD +R +V WNT+++ +A++G + AR LF M +K V+S
Sbjct: 158 IEMYTRCGDLSTARKAFD--GMREKDVVSWNTLISAHARMGQMRRARELFYSMPDKTVVS 215
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WT L++GY + A+ +FR MQ+E +PD+++++A L ACAQLGA+ELG WI+ Y
Sbjct: 216 WTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCS 275
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
++G+ V + NAL++MYAK G I +ALQ+F M K VI+W+T I GLA HG REA+
Sbjct: 276 KHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVR 335
Query: 298 MFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+F M+R RV PN ITF+ +LSAC H GLV+ G RY + MK YG+EP +E YGC++DL
Sbjct: 336 LFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDL 395
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR+G +Q A +R MP + IWGSLL+A +GDVE A + L++LEP + GN
Sbjct: 396 LGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDVETAVVAAERLVELEPGDVGNL 455
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+L+N+Y GRW E RK +R +K PGCS IEV V EFVAG P+ +
Sbjct: 456 VMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCSMIEVDNVVREFVAGQDLGPELGGIA 515
Query: 477 QILCKINGQMKFAEHLQNEFSG 498
+L + ++ E L + G
Sbjct: 516 TVLDILASKLADDEELVDSDCG 537
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/480 (42%), Positives = 303/480 (63%), Gaps = 13/480 (2%)
Query: 35 HKSKPDV--YLYNTTIKA----LCQTDNPLNAVI-LYNKIQASALRPDNYSFPFVLKAVV 87
H S P + +L+NT I+A Q P ++ I ++ +++ ++PD ++FPF+L++
Sbjct: 16 HFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFA 75
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
S + LGR +H Q + GL D V +LI MY+SC + AR+VFDE+ ++ W
Sbjct: 76 SPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQP--DLPSW 133
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ---VE 204
N+++ + G ++ AR LF +M E+NVISW+ +I GY + Q EA+ LFR MQ V
Sbjct: 134 NSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 193
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+V+P+E M L+AC +LGA+E G+W H YI++ G+ V L ALIDMYAK G + KA
Sbjct: 194 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 253
Query: 265 LQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
VF N+ NK V+ W+ MI+GLA+HGL E + +FS+M V+PN +TF+A+ AC H
Sbjct: 254 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 313
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV G+ Y M Y I P I+ YGCM+DL GRAG ++EA +++ MP E + +WG
Sbjct: 314 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 373
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL+ S ++GD+E E AL+ LI+LEP NSG Y +LSN+YA GRW + +R +M MG
Sbjct: 374 ALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 433
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+KK+PGCS IEV +HEF GD SHP+ +++ +L +I ++K ++ N +L+ D
Sbjct: 434 IKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLD 493
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/474 (42%), Positives = 297/474 (62%), Gaps = 8/474 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL + SR I S S+ + YA+SIF+ P+ Y++NT I+A + P A+
Sbjct: 34 GLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAAL 93
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+++++ +++ PD Y+F F LK+ S +E GR+IH + TGL D+ + LI +Y
Sbjct: 94 TIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLY 153
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA-RALFELMTEKNVISWTT 180
ASC CI DAR + D + R +V WN +++ YA+ G + A R +F KNV+SW
Sbjct: 154 ASCGCIEDARHLLDRMLER--DVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNA 211
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GY+ + +E + LF MQ VKPD +++ LSACA +GA+ GEW+H YI++ G
Sbjct: 212 MITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNG 271
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
++ + AL+DMY+K G I KAL+VF + K + TW ++I+GL+ HG G+ AL +FS
Sbjct: 272 ISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFS 331
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M KPNE+TF+ +LSAC GL++ GR FN+M +GI+P IE YGCM+DLLGR
Sbjct: 332 EMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRV 391
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L+EAE+L+++MP + + +W SLL A +G+VEL E Q L++L P S ++ LS
Sbjct: 392 GLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLS 451
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD--TSHPDF 472
N+YA +GRW + ++R+ MR GV+K PGCS IEV V+EF+AG+ S DF
Sbjct: 452 NMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGEGLVSGKDF 505
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/484 (41%), Positives = 294/484 (60%), Gaps = 6/484 (1%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
GLD + L + S +SLG DY+ ++F P V+ + I A+
Sbjct: 56 HGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNF 115
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
Y ++ + P+ ++F +++KL IE G+ +H Q V G DSD++V L+ +YA
Sbjct: 116 YAQMLTQGVEPNAFTF----SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYAR 171
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
+ A+++FD + + ++ M+ YAK G+L+ AR LF+ M E++ + W +I
Sbjct: 172 GGDVVSAQQLFDTMPEK--SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMID 229
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q PNEA+ LFRRM KP+E+ +L+ LSAC QLGA+E G W+H+YIE G+
Sbjct: 230 GYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF 289
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V + AL+DMY+K G + A VF+ + +K V+ W +MI G A+HG +EAL +F M
Sbjct: 290 NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMC 349
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
R + P ITFI ILSAC H G V G FN MK YGIEPKIE YGCM++LLGRAG++
Sbjct: 350 RMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHV 409
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
++A +L++ M E + +WG+LL A ++G + LGE ++ L+ NSG Y +LSNIY
Sbjct: 410 EQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIY 469
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A +G W+ ++R +M+D GVKK PGCS IEV+ +VHEF+AG +HP +Y +L +IN
Sbjct: 470 AAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEIN 529
Query: 484 GQMK 487
G +K
Sbjct: 530 GWLK 533
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + ++GL+ LN L YA G++ ++ +F +N SV WT +I G AL GL
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 108
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+AL+ +++M V+PN TF +IL C +E G+ + + G + +
Sbjct: 109 HEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKA-LHSQAVKLGFDSDLYVRT 163
Query: 352 CMIDLLGRAGYLQEAEKLLRRMP 374
++D+ R G + A++L MP
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMP 186
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/493 (39%), Positives = 309/493 (62%), Gaps = 6/493 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+ V G +++HL+ F+ + S + DYA I KP ++ N+ I+A C++ P
Sbjct: 29 LYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPE 88
Query: 59 NAVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ Y +I +S L+PDNY+ F+++A L E G ++H T+ G D+D HV
Sbjct: 89 KSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTG 148
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI +YA C+ KVF+ S+ + MV A+ GD+ AR LFE M E++ I
Sbjct: 149 LISLYAELGCLDSCHKVFN--SIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+W +I+GYAQ+ + EA+ +F MQ+E VK + +AM++ LSAC QLGA++ G W H+YI
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
E+ + V L L+D+YAK G + KA++VF M+ K+V TW++ + GLA++G G + L
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FS M++ V PN +TF+++L C VG V+ G+R+F+ M++ +GIEP++E YGC++DL
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
RAG L++A ++++MP + +AA+W SLL AS +Y ++ELG A + +++LE N G Y
Sbjct: 387 YARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAY 446
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSNIYA W+ +R+ M+ GV+K PGCS +EV+ VHEF GD SHP + ++
Sbjct: 447 VLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQID 506
Query: 477 QILCKINGQMKFA 489
+ I+ +++ A
Sbjct: 507 AVWKDISRRLRLA 519
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/497 (38%), Positives = 307/497 (61%), Gaps = 8/497 (1%)
Query: 4 RGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+GL+Q +L++ + + + L Y +F P+ +L+ I+ + +V
Sbjct: 65 KGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESV 124
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQM 120
+LYN ++ + P +++F +LKA + LGR++H QT+ G SD++V LI M
Sbjct: 125 LLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDM 184
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C C+ +VFDE+ R +V W +++ YAKVG++ A LF+ + K++++WT
Sbjct: 185 YVKCGCLGCGHRVFDEMLDR--DVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTA 242
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-- 238
++ GYAQ +P EA+ +F RMQ VK DE+ ++ +SACAQLGA + W+ + EQ
Sbjct: 243 MVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSG 302
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+G + V + +ALIDMYAK G + A +VFE M+ ++V ++++MI G A+HGL A+++
Sbjct: 303 FGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMEL 362
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M + +KPN +TFI +L+AC H G+VE G++ F +M+ +G+ P + Y CM+DLLG
Sbjct: 363 FDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLG 422
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L+EA L++ MP + +WG+LL A I+G+ ++ + A HL +LEP+ GNY +
Sbjct: 423 RAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYIL 482
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR-VHEFVAGDTSHPDFDRLYQ 477
LSNIYA GRW++ K+RK+MR G+KK PGCS++E K +HEF AGD SHP + Q
Sbjct: 483 LSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQ 542
Query: 478 ILCKINGQMKFAEHLQN 494
L + ++K+ + N
Sbjct: 543 ALEDLLDRLKYLGYQPN 559
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 309/523 (59%), Gaps = 31/523 (5%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI Q+ L+ +FI + +L Y FT P+V++YN IK P A
Sbjct: 159 MIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRA 218
Query: 61 VILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ Y + ++ S + P +Y+F ++KA + +ELG+ +HC G +S + V AL+
Sbjct: 219 LQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVD 278
Query: 120 MYASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTM 150
Y+ + + +ARKVFDE+ R W N A WNTM
Sbjct: 279 FYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTM 338
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+ GYA++G++ +A LF M K++ISWTT+I Y+Q Q +A+ ++ M++ + PDE
Sbjct: 339 IDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDE 398
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ M SACA +GA+ELG+ IH+Y+ GLN V + +AL+DMYAK G + +L +F
Sbjct: 399 VTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFK 458
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
+ +K++ W +I GLA+HG +AL MF+ MER ++ PN +TFI+ILSAC H GLV+ G
Sbjct: 459 LTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEG 518
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
R F M Y I P I YGCM+D+L ++GYL EA +L++ M FE N+ IWG+LL
Sbjct: 519 RSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCK 578
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-KKMPG 449
++G+ E+ E A++ L+ LEP NSG+Y +L ++YA W E IR +M++ GV KK PG
Sbjct: 579 LHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPG 638
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
S+IE+ +H+F A SHPD D++Y +L +++GQ+K A ++
Sbjct: 639 SSWIELEGTIHQFSASADSHPDSDKIYFVLTELDGQLKLAGYI 681
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/490 (40%), Positives = 305/490 (62%), Gaps = 7/490 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G+D +N++ + ID L + A +F + D +N I + +A
Sbjct: 269 IVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDA 328
Query: 61 VILYNKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ + ++Q +PD + L A L +ELG EIH V L + AL+
Sbjct: 329 INTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIH-NYVRKELGFTTRIDNALLD 387
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA C C+ AR +FDE+S++ NV W +M++GY GDL AR LF+ ++V+ WT
Sbjct: 388 MYAKCGCLNIARNIFDEMSMK--NVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 445
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q ++A+ LFR MQ++ VKPD+ ++ L+ CAQLGA+E G+WIH Y+++
Sbjct: 446 AMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN 505
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ V + ALI+MY+K G + K+L++F +++K +WT++I GLA++G EAL +F
Sbjct: 506 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLF 565
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
S MER KP++ITFI +LSAC H GLVE GRR+FN MK + IEPK+E YGC+IDLLGR
Sbjct: 566 SEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGR 625
Query: 360 AGYLQEAEKLLRRMPFEAN---AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
AG L EAE+L++ +P E ++G+LL+A I+ +V++GE + L +E +S +
Sbjct: 626 AGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIH 685
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+L+NIYA + RW ++ K+R+ M+++GVKKMPGCS IEV VHEF+ GD SHP+ +
Sbjct: 686 TLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEIC 745
Query: 477 QILCKINGQM 486
+L ++ GQ+
Sbjct: 746 SMLNRVTGQL 755
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 180/362 (49%), Gaps = 70/362 (19%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL+ + +++ + C SSLG YA IF + P +++YN +K + ++
Sbjct: 170 GLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLL 229
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+ +++ L PD +++PFVLKA+ L + G ++ V TG+D D +V +LI MY
Sbjct: 230 LFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYY 289
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ +A+K+FDE++ R + WN M++GY + FE
Sbjct: 290 ELSNVENAKKLFDEMTTR--DSVSWNVMISGYVRC-------RRFE-------------- 326
Query: 183 AGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYG 240
+AI FR MQ E N KPDE +++ LSAC L +ELG+ IHNY+ ++ G
Sbjct: 327 ----------DAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELG 376
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
T ++NAL+DMYAK G + A +F+ M K+VI WT+MI+G G REA D+F
Sbjct: 377 FTT--RIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 434
Query: 301 R-------------------------------MERARVKPNEITFIAILSACCHVGLVEL 329
+ M+ RVKP++ T + +L+ C +G +E
Sbjct: 435 KSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQ 494
Query: 330 GR 331
G+
Sbjct: 495 GK 496
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
+ +G+L A +F + + ++ + ++ YA+ + + LF++++ + + PD
Sbjct: 188 SSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYP 247
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
L A L V GE + +I + G++ + N+LIDMY + + A ++F+ M +
Sbjct: 248 FVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTR 307
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRY 333
++W MI+G +A++ F M++ KP+E T ++ LSAC + +ELG
Sbjct: 308 DSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEI 367
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
N ++ G +I+ ++D+ + G L A + M + N W S+++ G
Sbjct: 368 HNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCG 424
Query: 394 DV 395
D+
Sbjct: 425 DL 426
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 305/490 (62%), Gaps = 7/490 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G+D +N++ + ID L + A +F + D +N I + +A
Sbjct: 223 IVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDA 282
Query: 61 VILYNKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ + ++Q +PD + L A L +ELG EIH V L + AL+
Sbjct: 283 INTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIH-NYVRKELGFTTRIDNALLD 341
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA C C+ AR +FDE+S++ NV W +M++GY GDL AR LF+ ++V+ WT
Sbjct: 342 MYAKCGCLNIARNIFDEMSMK--NVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 399
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q ++A+ LFR MQ++ +KPD+ ++ L+ CAQLGA+E G+WIH Y+++
Sbjct: 400 AMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN 459
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ V + ALI+MY+K G + K+L++F +++K +WT++I GLA++G EAL +F
Sbjct: 460 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLF 519
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
S MER KP++ITFI +LSAC H GLVE GRR+FN MK + IEPK+E YGC+IDLLGR
Sbjct: 520 SEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGR 579
Query: 360 AGYLQEAEKLLRRMPFEAN---AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
AG L EAE+L++ +P E ++G+LL+A I+ +V++GE + L +E +S +
Sbjct: 580 AGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIH 639
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+L+NIYA + RW ++ K+R+ M+++GVKKMPGCS IEV VHEF+ GD SHP+ +
Sbjct: 640 TLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEIC 699
Query: 477 QILCKINGQM 486
+L ++ GQ+
Sbjct: 700 SMLNRVTGQL 709
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 180/362 (49%), Gaps = 70/362 (19%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL+ + +++ + C SSLG YA IF + P +++YN +K + ++
Sbjct: 124 GLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLL 183
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+ +++ L PD +++PFVLKA+ L + G ++ V TG+D D +V +LI MY
Sbjct: 184 LFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYY 243
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ +A+K+FDE++ R + WN M++GY + FE
Sbjct: 244 ELSNVENAKKLFDEMTTR--DSVSWNVMISGYVRC-------RRFE-------------- 280
Query: 183 AGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYG 240
+AI FR MQ E N KPDE +++ LSAC L +ELG+ IHNY+ ++ G
Sbjct: 281 ----------DAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELG 330
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
T ++NAL+DMYAK G + A +F+ M K+VI WT+MI+G G REA D+F
Sbjct: 331 FTT--RIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 388
Query: 301 R-------------------------------MERARVKPNEITFIAILSACCHVGLVEL 329
+ M+ ++KP++ T + +L+ C +G +E
Sbjct: 389 KSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQ 448
Query: 330 GR 331
G+
Sbjct: 449 GK 450
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
+ +G+L A +F + + ++ + ++ YA+ + + LF++++ + + PD
Sbjct: 142 SSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYP 201
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
L A L V GE + +I + G++ + N+LIDMY + + A ++F+ M +
Sbjct: 202 FVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTR 261
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRY 333
++W MI+G +A++ F M++ KP+E T ++ LSAC + +ELG
Sbjct: 262 DSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEI 321
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
N ++ G +I+ ++D+ + G L A + M + N W S+++ G
Sbjct: 322 HNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCG 378
Query: 394 DV 395
D+
Sbjct: 379 DL 380
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 308/523 (58%), Gaps = 31/523 (5%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI Q+ L+ +FI + +L Y FT P+V++YN IK P A
Sbjct: 62 MIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRA 121
Query: 61 VILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ Y + ++ S + P +Y+F ++KA + +ELG+ +HC G +S + V AL+
Sbjct: 122 LQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVD 181
Query: 120 MYASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTM 150
Y+ + + +ARKVFDE+ R W N A WNTM
Sbjct: 182 FYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTM 241
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+ GY ++G++ +A LF M K++ISWTT+I Y+Q Q +A+ ++ M++ + PDE
Sbjct: 242 IDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDE 301
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ M SACA +GA+ELG+ IH+Y+ GLN V + +AL+DMYAK G + +L +F
Sbjct: 302 VTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFK 361
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
+ +K++ W +I GLA+HG +AL MF+ MER ++ PN +TFI+ILSAC H GLV+ G
Sbjct: 362 LTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEG 421
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
R F M Y I P I YGCM+D+L ++GYL EA +L++ M FE N+ IWG+LL
Sbjct: 422 RSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCK 481
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-KKMPG 449
++G+ E+ E A++ L+ LEP NSG+Y +L ++YA W E IR +M++ GV KK PG
Sbjct: 482 LHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPG 541
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
S+IE+ +H+F A SHPD D++Y IL +++GQ+K A ++
Sbjct: 542 SSWIELEGTIHQFSASADSHPDSDKIYFILTELDGQLKLAGYI 584
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 297/487 (60%), Gaps = 31/487 (6%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRP-DNYSFPFVLKA 85
DYA +F H PDV+++NT I+ L ++D P N++I + +++ P D++SF F+LKA
Sbjct: 56 DYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKA 115
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL---SLRVW 142
++E G ++HCQ + GLD+ + V L+ MY+ C + A+KVF+E+ ++ W
Sbjct: 116 AASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAW 175
Query: 143 NVAV--------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVI 176
N V WN M+AGY K G+L AR LF M K+ +
Sbjct: 176 NAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDV 235
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SW+T+I G+A EA FR +Q ++P+E+++ ALSACA GA+E G+ +H +I
Sbjct: 236 SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFI 295
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREA 295
E+ G +V +NNAL+D Y+K G +G A VFE M K S+++WT+MIAGLA+HG G EA
Sbjct: 296 EKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEA 355
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F ME + ++P+ I FI+IL AC H GL+E G YF MK Y IEP IE YGCM+D
Sbjct: 356 IQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVD 415
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
L GRAG L +A + + MP A IW +LL A +I+G+V+L E + L +L+P+NSG+
Sbjct: 416 LYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGD 475
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+ +LSNIYA+ G+W + +R+ M D + K PG S IEV K ++ FVAG+ + +
Sbjct: 476 HVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEA 535
Query: 476 YQILCKI 482
Y+ L +I
Sbjct: 536 YEKLKEI 542
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 48/329 (14%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
IV GLD + + + + S GF +A +F +P+V +N + A + + A
Sbjct: 133 IVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGAD 192
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+++N++ L S+ +L K +EL R++ + + DV + +I +
Sbjct: 193 MMFNRMPFRNLT----SWNVMLAGYTKAGELELARKLFLE---MPVKDDVS-WSTMIVGF 244
Query: 122 ASCKCIYDARKVFDEL-------------------------------------SLRVWNV 144
A Y+A F EL S +W V
Sbjct: 245 AHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMV 304
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+V N ++ Y+K G++ AR +FE M EK +++SWT++IAG A EAI LF M+
Sbjct: 305 SVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEE 364
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
++PD IA ++ L AC+ G +E G E+ + + Y + + ++D+Y ++G++
Sbjct: 365 SGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLD 424
Query: 263 KALQVFENMKN-KSVITWTTMIAGLALHG 290
KA + +M + I W T++ ++HG
Sbjct: 425 KAYEFIIHMPVLPTAIIWRTLLGACSIHG 453
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 20/293 (6%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-DEIAMLAALS 218
L+ AR LF +V TLI G A+ D P ++ F M+ P D + L
Sbjct: 55 LDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLK 114
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A A ++E G +H +GL+T + + L+ MY++ G + A +VFE M +V+
Sbjct: 115 AAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVA 174
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W ++ G + A MF+RM N ++ +L+ G +EL R+ F M
Sbjct: 175 WNAVVTACFRCGDVKGADMMFNRMPFR----NLTSWNVMLAGYTKAGELELARKLFLEMP 230
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIYGDV 395
+ + + MI G+ EA R + N L+A G +
Sbjct: 231 VKDDV-----SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAI 285
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
E G+ L I+ SG ++S A+L +++ G + M + ++MP
Sbjct: 286 EFGK-ILHGFIE----KSGFLWMVSVNNALLDTYSKCGNVG--MARLVFERMP 331
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/477 (42%), Positives = 301/477 (63%), Gaps = 4/477 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHK-SKPDVYLYNTTIKALCQTDNPLN 59
M+ GL Q+ + +++F+ C S FS YA+ +F + +PD +L+N I+ L +D P
Sbjct: 34 MLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGLSCSDQPDR 93
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+++LY+++ + + Y+FPF+LKA LS + +IH G D++ V +LI
Sbjct: 94 SLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLIN 153
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN-VISW 178
YA A +FD + + WN+++ GY K G+++ A LF M EKN ISW
Sbjct: 154 SYAVTGNFKHAHLLFDRIQEP--DAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISW 211
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
TT+I+GY Q EA+ LF MQ NV PD +++ +ALSAC+QLGA+E G+WIH+Y +
Sbjct: 212 TTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANK 271
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
L LIDMYAK G++ +AL VF+NMK KSV WT +I+G A HGLGREA+
Sbjct: 272 TRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISK 331
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M+ VKPN ITF A+L+AC + GLVE G+ FN ++ Y ++P IE YGCM+DLLG
Sbjct: 332 FLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLG 391
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L EA + +++MP + NA IWGSLL A I+ ++ELGE + LI+++ ++ G Y
Sbjct: 392 RAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVH 451
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
++NI+A+ +W+++ + R++MR+ GV K+PGCS I + HEF+AGD SH + +
Sbjct: 452 MANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEI 508
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/506 (39%), Positives = 292/506 (57%), Gaps = 31/506 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
G Q++++ + ++ FS+ +A +F + P+V+++N IK Q + P A+
Sbjct: 57 GHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAIC 116
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
Y K+ + RP+ +++P + KA E G ++H + GL DVH+ +A IQMY
Sbjct: 117 CYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYG 176
Query: 123 SCKCIYDARKVFDE-----------------------------LSLRVWNVAVWNTMVAG 153
S + AR++ E S+ NV WN MV+G
Sbjct: 177 SFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSG 236
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
AK G + AR LF M EKN ISW+ +I GY + EA+ +F MQ E ++P + +
Sbjct: 237 MAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVL 296
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
+ L+ACA LGA++ G WIH Y+ + L AL+DMYAK G++ A VFE M+
Sbjct: 297 SSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEK 356
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
K V TW MI GL +HG +A+++F +M++ + +PN IT + +LSAC H G+V+ G R
Sbjct: 357 KEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRI 416
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
FN M+ YGIEP +E YGC++DLLGRAG L EAE+++ MP E +AA+WG+LL A +G
Sbjct: 417 FNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHG 476
Query: 394 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
DVELGE + L++LEP NSG YA+LSNIYA GRW++ +RK+M++ GVK G S I
Sbjct: 477 DVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMI 536
Query: 454 EVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ VHEF GD SHP +Y +L
Sbjct: 537 DFDGVVHEFKMGDGSHPQMKNIYLML 562
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 43/306 (14%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
+++H + TG D +V L++ YA+
Sbjct: 47 KQVHAVALRTGHFQDHYVSGTLVKCYAN-------------------------------P 75
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+LN A +FE + NV + +I G Q ++P +AI + +M + + +P++
Sbjct: 76 HFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPT 135
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
AC A E G +H ++ + GL+ V + +A I MY G++ A ++ N
Sbjct: 136 LFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSD 195
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
VI + MI G G A ++F ME V ++ ++S G++E R FN
Sbjct: 196 VICFNAMIDGYLKCGEVEAAKELFWSMEDKNVG----SWNVMVSGMAKCGMIEEARELFN 251
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK---LLRRMPFEANAAIWGSLLAASNIY 392
MK + I + MID + GY +EA + +++R + S+LAA
Sbjct: 252 EMKEKNEI-----SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANL 306
Query: 393 GDVELG 398
G ++ G
Sbjct: 307 GALDQG 312
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/498 (40%), Positives = 304/498 (61%), Gaps = 6/498 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPL 58
+++ GL + L+ +F+ S + ++ YS + + P ++ +N+ I+A ++ P
Sbjct: 32 LLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNSMIRAHSKSSTPH 91
Query: 59 NAVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ Y++I SA L PDNY+F F+++ +L G +H V G + D HV +
Sbjct: 92 RSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSG 151
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI MYA + +VF S+ ++ MV+ AK+GD+ AR LF+ M+ K+ I
Sbjct: 152 LIYMYAELGGLDACHRVFS--SICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPI 209
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+W +I+GY Q Q EA++LF MQ E VK +E++M++ LSAC+ LGA++ G W H YI
Sbjct: 210 AWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYI 269
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
E+ L + L ALIDMYAK G + KA++VF MK K+V TW++ I GLA++G G + L
Sbjct: 270 ERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCL 329
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FS M++ V+PNEITF+++L C VGLVE GR++F M YGIEP++E YGCM+DL
Sbjct: 330 ELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDL 389
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
GRAG+L EA + MP + WG+LL A IY ++E+GE A + +++LE N G Y
Sbjct: 390 YGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAY 449
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSNIYA W+ +R+ M GV+K PGCS IEV VHEF GD SHP + +
Sbjct: 450 VLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQ 509
Query: 477 QILCKINGQMKFAEHLQN 494
+L +I+ ++K + ++ N
Sbjct: 510 VMLGEISRRLKLSGYVAN 527
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/511 (38%), Positives = 314/511 (61%), Gaps = 33/511 (6%)
Query: 5 GLDQNNHLLSRFIDSCS-SLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL+ + + + + C+ SL S DYA +F + PDV+++NT I+ L ++D P ++++
Sbjct: 32 GLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLL 91
Query: 63 LYNKIQASALRP-DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ +++ ++ P D++SF F++KA L ++ +G ++HCQ + GLD+ + V LI MY
Sbjct: 92 KFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMY 151
Query: 122 ASCKCIYDARKVFDELS-----------------------------LRVWNVAVWNTMVA 152
C + ARKVFDE+ + V N+ WN M+A
Sbjct: 152 GECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLA 211
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
GY K G+L AR +F M K+ +SW+T+I G+A EA + FR +Q + ++P+E +
Sbjct: 212 GYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETS 271
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ LSACAQ GA+E G+ +H +IE+ GL IV +NNAL+D Y+K G + A VFE +
Sbjct: 272 LTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIM 331
Query: 273 N-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
N +++++WT+M+A LA+HG G EA+ +F +ME + ++P+EI FI++L AC H GLVE G
Sbjct: 332 NERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGC 391
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
YF+ MK Y IEP IE YGCM+DL GRAG LQ+A + + +MP A IW +LL A ++
Sbjct: 392 EYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSM 451
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+GDV+L E + L +L+P+NS ++ +LSN YA+ G+W ++ +R+ M + + K PG S
Sbjct: 452 HGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWS 511
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
IEV K ++ F+AG + + Y+ L +I
Sbjct: 512 MIEVDKIMYTFLAGTKQYKITEEAYKKLKEI 542
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 156/358 (43%), Gaps = 50/358 (13%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+V GLD + + + I GF +A +F +P+ +N + A C+ +
Sbjct: 133 LVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGR 192
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L++ + L S+ +L K +EL RE+ + + DV + +I +
Sbjct: 193 ELFDLMPVRNL----MSWNVMLAGYTKAGELELAREMFLE---MPMKDDVS-WSTMIVGF 244
Query: 122 ASCKCIYDARKVFDELSLR-------------------------------------VWNV 144
A +A F EL + W V
Sbjct: 245 AHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIV 304
Query: 145 AVWNTMVAGYAKVGDLNNARALFE-LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+V N ++ Y+K G++ A+ +FE +M E+N++SWT+++A A EAI +F +M+
Sbjct: 305 SVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEE 364
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
++PDEIA ++ L AC+ G VE G E+ Y + + ++D+Y ++G++
Sbjct: 365 SGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQ 424
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
KA + M + I W T++ ++HG + A + R+ + + PN + +LS
Sbjct: 425 KAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERL--SELDPNNSSDHVLLS 480
>gi|125569795|gb|EAZ11310.1| hypothetical protein OsJ_01174 [Oryza sativa Japonica Group]
Length = 326
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/312 (58%), Positives = 234/312 (75%)
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I YAQM QP EAI +FRRMQVE ++PD +A+L+ LSAC LG V+LGEW+H ++ + G
Sbjct: 2 VIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRG 61
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L +PL NA+IDMY K G + KAL+VFE M+ KS++TWTTMIAG ALHGLG EA+++F
Sbjct: 62 LCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGLEAVELFR 121
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
RME+ V PN+ITF+A+LS C HVGL +LGR YF M S+Y I+P++E YGCMIDLLGRA
Sbjct: 122 RMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRA 181
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L EA L++ MPF+ANAAIWG+LLAA+ +GD ELGE AL HLI+LEPHNSGNY +LS
Sbjct: 182 GCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHNSGNYILLS 241
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
NIYA RW+ ++R MRD G++ +PG S I+V VHEF + D SHP ++ ++LC
Sbjct: 242 NIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDGMVHEFTSRDGSHPSLHKIREVLC 301
Query: 481 KINGQMKFAEHL 492
IN +K H+
Sbjct: 302 AINSNIKSVGHI 313
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 38/255 (14%)
Query: 47 TIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG 106
I A Q P A+ ++ ++Q + PD + VL A L ++LG +H + G
Sbjct: 2 VIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRG 61
Query: 107 LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARAL 166
L ++ ++ A+I MY C G + A +
Sbjct: 62 LCQEIPLMNAIIDMYVKC---------------------------------GSVKKALEV 88
Query: 167 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV 226
FE M +K++++WTT+IAG+A EA+ LFRRM+ ENV P++I LA LS C+ +G
Sbjct: 89 FEGMEQKSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLT 148
Query: 227 ELGEW-IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIA 284
+LG W + QY + V +ID+ ++G + +A + ++M K+ W ++A
Sbjct: 149 DLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLA 208
Query: 285 GLALHG---LGREAL 296
HG LG +AL
Sbjct: 209 AARTHGDTELGEQAL 223
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 325/523 (62%), Gaps = 21/523 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQT-DNP 57
++ G +N + + + ++ F D YA S+F + + + +NT I+AL +T D
Sbjct: 38 LVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRH 97
Query: 58 LNAVILYNKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
L+A++++ ++ + A + P+ ++FP VLKA ++ + G+++H + GL D VV
Sbjct: 98 LDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTN 157
Query: 117 LIQMYASCKCIYDARKVF---------------DELSLRVWNVAVWNTMVAGYAKVGDLN 161
L++MY C + DA +F DE R +NV + N MV GYA+VG+L
Sbjct: 158 LLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERG-REFNVVLCNVMVDGYARVGNLK 216
Query: 162 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSAC 220
AR LF+ M +++V+SW +I+GYAQ EAI +F RM Q+ +V P+ + +++ L A
Sbjct: 217 AARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAI 276
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
++LG +ELG+W+H Y E+ + L +AL+DMYAK G I KA+QVFE + +VITW
Sbjct: 277 SRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWN 336
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
+I GLA+HG + + SRME+ + P+++T+IAILSAC H GLV+ GR +FN M +
Sbjct: 337 AVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNS 396
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 400
G++PKIE YGCM+DLLGRAGYL+EAE+L+ MP + + IW +LL AS ++ ++++G
Sbjct: 397 VGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMR 456
Query: 401 ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVH 460
A + L+++ PH+SG Y LSN+YA G W+ +R +M+DM ++K PGCS+IE+ +H
Sbjct: 457 AAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIH 516
Query: 461 EFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
EF+ D SH ++ +L +I+ ++ H+ + +L+ D
Sbjct: 517 EFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMD 559
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 308/479 (64%), Gaps = 7/479 (1%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L ++ L+++ +D C+ G ++YA +F + P+ +LYN I+A + A+ ++
Sbjct: 16 LSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYILAITVHK 75
Query: 66 KIQASA-----LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ + PD ++FPFV+K L LG+++H G S+ + +L++M
Sbjct: 76 QMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEM 135
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + DA +VF+E++ R + WNT+++G+ ++G + ARA+FE + +K + SWT
Sbjct: 136 YVKCDSLDDAHRVFEEMTER--DAVSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTA 193
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+++GYA++ A+ FRRMQ+ +++ DEI++++ L ACAQLGA+ELG+WIH Y ++ G
Sbjct: 194 IVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALELGKWIHIYADKAG 253
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + NALI++YAK G + + ++F M + VI+W+TMI GLA HG REA+++F
Sbjct: 254 FLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLANHGRAREAIELFQ 313
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M++A+V+PN ITF+ +LSAC H GL+ G YF M+ IEP +E YGC+++LLG +
Sbjct: 314 EMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEPGVEHYGCLVNLLGLS 373
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L +A +L+++MP + ++ IWG L ++ +G++E+ A++HL++LEP ++GNY LS
Sbjct: 374 GRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAMEHLLELEPDDTGNYITLS 433
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
N+YA LG+W+ ++RK+M + K PGCS IEV V E+ +GD S P +Y++L
Sbjct: 434 NLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQEYASGDDSKPFSKAIYRVL 492
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 298/469 (63%), Gaps = 10/469 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
+ Q+++L ++ + C++ +A +F P+++L+N IKA Q +AV +Y
Sbjct: 42 ISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYI 101
Query: 66 KIQASALRP-------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ P D +++PF+LKA + +ELG+++H V +G DS V +LI
Sbjct: 102 RMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLI 161
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+MY + A KVFDE+ R +V WN +++ +A++G + A ALF M +K +++W
Sbjct: 162 EMYTRAGDLALAHKVFDEMRER--DVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTW 219
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T +++GY + A+ FR MQ E +PD+++++A L ACAQLGA+ELG WI+ Y ++
Sbjct: 220 TAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKR 279
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+G+ T + NAL++MYAK G I +ALQ+F+ M +K VI+W+T+I GLA HG EA+ +
Sbjct: 280 HGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWL 339
Query: 299 FSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F+ ME+ +V+PN ITF+ +LSAC + GLV+ G +F+ M YG+EP +E YGC++DLL
Sbjct: 340 FTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLL 399
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GR+G ++ A L+R MP A+A +WGSLL+A +GDV+ A + L++LEP + GN
Sbjct: 400 GRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLV 459
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
+L+N+YA RW++ RK +R ++K PGCS IEV V EFVAG+
Sbjct: 460 MLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGE 508
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E A++A L AC + +H ++ + ++ L ++ + ++ A +VF
Sbjct: 14 EDAVMARLRACVTFRDLLR---VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFA 70
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 322
+++ ++ MI A + R+A+ ++ RM R P + T+ +L AC
Sbjct: 71 QVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 323 HVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
+ELG++ + ++++S G + +I++ RAG L A K+ M E +
Sbjct: 131 GTAALELGKQVHTHVVRS--GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR-ERDVVS 187
Query: 382 WGSLLAA 388
W L++A
Sbjct: 188 WNMLISA 194
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/466 (41%), Positives = 289/466 (62%), Gaps = 2/466 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F K DV +N I A + + L+ ++ + P + VL
Sbjct: 167 GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL 226
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A KL + G+++H ++S++ + A+I MYA C + A +F ++ R +
Sbjct: 227 SACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR--D 284
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ W T+V+G+ +G+++ AR F+ M EK+ +SWT +I GY + ++ EA+ LFR MQ
Sbjct: 285 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 344
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
NVKPDE M++ L+ACA LGA+ELGEWI YI++ + + + NALIDMY K G + K
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDK 404
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +F M + TWT MI GLA++G G +ALDMFS M +A + P+EIT+I +LSAC H
Sbjct: 405 AESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTH 464
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ GR+YF M S++GIEP I YGC++DLL RAG L+EA +++ MP +AN+ +WG
Sbjct: 465 TGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWG 524
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LLA +Y + ++ E ++ +++LEP N Y +L NIYA RWN+ ++R++M D G
Sbjct: 525 ALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKG 584
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+KK PGCS IE++ RVHEFVAGD SHP + L K+ +K A
Sbjct: 585 IKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLA 630
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 211/436 (48%), Gaps = 75/436 (17%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I +GL+ N L +R + C + + D+ Y+ +F +P+++++NT I+ + D P
Sbjct: 42 IKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQL 101
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V LY ++ ++PD Y+FPF+ K + +E GR++H + GL +V V AL+Q
Sbjct: 102 GVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQ 161
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C + AR VFD +V WN +++ Y KVG +R LF +M +K V+
Sbjct: 162 MYLLCGQLDTARGVFDVCPKA--DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVL--- 216
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
P + ++ LSAC++L + G+ +H+Y++
Sbjct: 217 ----------------------------PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG------- 292
+ + + L NA+IDMYA G++ AL +F +M N+ +I+WTT+++G LG
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT--NLGEIDVARN 306
Query: 293 --------------------------REALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+EAL++F M+ VKP+E T +++L+AC H+G
Sbjct: 307 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 366
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ELG + R I+ + +ID+ + G + +AE + R M + + W +++
Sbjct: 367 LELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 424
Query: 387 AASNIYGDVELGECAL 402
+ G GE AL
Sbjct: 425 VGLAVNGH---GEKAL 437
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/442 (41%), Positives = 287/442 (64%), Gaps = 2/442 (0%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
S G AY +F D+ +N+ I + + A+ +Y +++A +RP+ +
Sbjct: 205 SCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIG 264
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
++ + ++ + LG+E HC GL+ + + AL+ MY C + AR +FD ++ +
Sbjct: 265 MISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK- 323
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ W TMV GYA+ G L+ AR + + EK+V+ W +I+G Q Q EA+ LF M
Sbjct: 324 -TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM 382
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
Q+ ++PD++ M+ LSAC+QLGA+++G WIH+YIE++ L+ V L AL+DMYAK G I
Sbjct: 383 QIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNI 442
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+ALQVFE + ++ +TWT +I GLALHG ++AL FS+M + P+EITF+ +LSAC
Sbjct: 443 ARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC 502
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
CH GLVE GR+YF+ M S++ + PK++ Y CM+DLLGRAG+L+EAE+L++ MP A+AA+
Sbjct: 503 CHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAV 562
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
G+L A +YG+V++GE L++++P +SGNY +L+++Y+ W E+ RK+M D
Sbjct: 563 LGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMND 622
Query: 442 MGVKKMPGCSYIEVSKRVHEFV 463
GV+K PGCS +E++ VHEFV
Sbjct: 623 KGVEKTPGCSLVEINGIVHEFV 644
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 201/430 (46%), Gaps = 69/430 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL +N SR + C S DY I + +V+ +N I+ ++ +
Sbjct: 80 MVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIE 139
Query: 59 NAVILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+LY + + L+PDN+++P +LK + LG + + G + D+ V A
Sbjct: 140 GGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNAS 199
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I M SC + A VF++ RV ++ WN+M+ G K G
Sbjct: 200 ITMLLSCGELSVAYDVFNK--SRVRDLVTWNSMITGCVKRG------------------- 238
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
EAI +++ M+ E V+P+EI M+ +S+C+Q+ + LG+ H YI+
Sbjct: 239 ------------LAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK 286
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL------ 291
++GL +PL NAL+DMY K G++ A +F+NM K++++WTTM+ G A G
Sbjct: 287 EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVARE 346
Query: 292 -------------------------GREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
G+EAL +F M+ ++P+++T + LSAC +G
Sbjct: 347 ILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGA 406
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++G + ++ R+ + + ++D+ + G + A ++ +P + N W +++
Sbjct: 407 LDVGIWIHHYIE-RHKLSIDVALGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVI 464
Query: 387 AASNIYGDVE 396
++G+ +
Sbjct: 465 CGLALHGNAQ 474
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 298/469 (63%), Gaps = 10/469 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
+ Q+++L ++ + C++ +A +F P+++L+N IKA Q +AV +Y
Sbjct: 42 ISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYI 101
Query: 66 KIQASALRP-------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ P D +++PF+LKA + +ELG+++H V +G DS V +LI
Sbjct: 102 RMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLI 161
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+MY + A KVFDE+ R +V WN +++ +A++G + A ALF M +K +++W
Sbjct: 162 EMYTRAGDLALAHKVFDEMRER--DVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTW 219
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T +++GY + A+ FR MQ E +PD+++++A L ACAQLGA+ELG WI+ Y ++
Sbjct: 220 TAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKR 279
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+G+ T + NAL++MYAK G I +ALQ+F+ M +K VI+W+T+I GLA HG EA+ +
Sbjct: 280 HGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWL 339
Query: 299 FSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F+ ME+ +V+PN ITF+ +LSAC + GLV+ G +F+ M YG+EP +E YGC++DLL
Sbjct: 340 FTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLL 399
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GR+G ++ A L+R MP A+A +WGSLL+A +GDV+ A + L++LEP + GN
Sbjct: 400 GRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLV 459
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
+L+N+YA RW++ RK +R ++K PGCS IEV V EFVAG+
Sbjct: 460 MLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGE 508
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E A++A L AC + +H ++ + ++ L ++ + ++ A +VF
Sbjct: 14 EDAVMARLRACVTFRDLLR---VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFA 70
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 322
+++ ++ MI A + R+A+ ++ RM R P + T+ +L AC
Sbjct: 71 QVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 323 HVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
+ELG++ + ++++S G + +I++ RAG L A K+ M E +
Sbjct: 131 GTAALELGKQVHTHVVRS--GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR-ERDVVS 187
Query: 382 WGSLLAA 388
W L++A
Sbjct: 188 WNMLISA 194
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/466 (41%), Positives = 289/466 (62%), Gaps = 2/466 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F K DV +N I A + + L+ ++ + P + VL
Sbjct: 188 GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL 247
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A KL + G+++H ++S++ + A+I MYA C + A +F ++ R +
Sbjct: 248 SACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR--D 305
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ W T+V+G+ +G+++ AR F+ M EK+ +SWT +I GY + ++ EA+ LFR MQ
Sbjct: 306 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 365
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
NVKPDE M++ L+ACA LGA+ELGEWI YI++ + + + NALIDMY K G + K
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDK 425
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +F M + TWT MI GLA++G G +ALDMFS M +A + P+EIT+I +LSAC H
Sbjct: 426 AESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTH 485
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ GR+YF M S++GIEP I YGC++DLL RAG L+EA +++ MP +AN+ +WG
Sbjct: 486 TGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWG 545
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LLA +Y + ++ E ++ +++LEP N Y +L NIYA RWN+ ++R++M D G
Sbjct: 546 ALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKG 605
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+KK PGCS IE++ RVHEFVAGD SHP + L K+ +K A
Sbjct: 606 IKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLA 651
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 211/436 (48%), Gaps = 75/436 (17%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I +GL+ N L +R + C + + D+ Y+ +F +P+++++NT I+ + D P
Sbjct: 63 IKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQL 122
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V LY ++ ++PD Y+FPF+ K + +E GR++H + GL +V V AL+Q
Sbjct: 123 GVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQ 182
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C + AR VFD +V WN +++ Y KVG +R LF +M +K V+
Sbjct: 183 MYLLCGQLDTARGVFDVCPKA--DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVL--- 237
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
P + ++ LSAC++L + G+ +H+Y++
Sbjct: 238 ----------------------------PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG------- 292
+ + + L NA+IDMYA G++ AL +F +M N+ +I+WTT+++G LG
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT--NLGEIDVARN 327
Query: 293 --------------------------REALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+EAL++F M+ VKP+E T +++L+AC H+G
Sbjct: 328 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ELG + R I+ + +ID+ + G + +AE + R M + + W +++
Sbjct: 388 LELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 445
Query: 387 AASNIYGDVELGECAL 402
+ G GE AL
Sbjct: 446 VGLAVNGH---GEKAL 458
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/488 (39%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 1 MIVRGLDQNNHLLSRFI--DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MIV+G + N L I S + G YA+ +F H ++PD +++NT I+ Q+ +PL
Sbjct: 36 MIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPL 95
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
NA+ LY++++ +RPD ++FPFVLKA +L +++G +H + G +S+ V LI
Sbjct: 96 NAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLI 155
Query: 119 QMYASC------KCIYD-------------------------ARKVFDELSLRVWNVAVW 147
+A+C + ++D AR++FDE+ ++ ++ W
Sbjct: 156 YFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK--DLVSW 213
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+ GYAK G++ +AR LF+ + +++V++W +IAGY +A+ +F M+
Sbjct: 214 NVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL 273
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 266
PDE+ ML+ LSAC LG ++ G+ IH I + G + V L NALIDMYAK G I +AL+
Sbjct: 274 PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALE 333
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ M+ K V TW +++ GLA HG +++ +F+ M + +++P+EITF+ +L AC H G
Sbjct: 334 VFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGR 393
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE GR+YF++M+ Y IEP I YGCM+DLLGRAG L EA + M E NA +W +LL
Sbjct: 394 VEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL 453
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A I+G+VELG A L+K+ SG+Y +LSNIYA G W+ K+RK+M D GV+K
Sbjct: 454 GACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRK 513
Query: 447 MPGCSYIE 454
GCS IE
Sbjct: 514 EAGCSLIE 521
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 300/490 (61%), Gaps = 4/490 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + +++ S G + A +F D+ +NT I + NP A+ L+
Sbjct: 155 GLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELF 214
Query: 65 NKIQA--SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ A + +RPD + + ++ +ELGR +H G+ V ++ AL+ MY
Sbjct: 215 WRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYI 274
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C + A+ VF+ + R V W TM+ G+AK G +++AR +F+ M E++V W L+
Sbjct: 275 KCGSLEMAKSVFERIEHR--TVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALM 332
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
GY Q Q EA++LF MQ +V PDEI M+ L+AC+QLGA+E+G W+H YIE++ L
Sbjct: 333 TGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLV 392
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
V L +LIDMYAK G I KA+ +F+ + K+ +TWT MI GLA HG EA++ F M
Sbjct: 393 FSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTM 452
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
KP+EITFI +LSACCH GLV+ GR +F++M+++Y +E K++ Y CMIDLLGRAG+
Sbjct: 453 IELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGH 512
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L EAE+L+ MP E +A +WG++ A + G++ LGE A L++++P +SG Y +L+N+
Sbjct: 513 LDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANM 572
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA ++ K+R +MR +GV+K+PGCS IE++ VHEF+ D SH D +Y L +I
Sbjct: 573 YAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEI 632
Query: 483 NGQMKFAEHL 492
Q+K L
Sbjct: 633 TLQIKHTADL 642
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 188/399 (47%), Gaps = 91/399 (22%)
Query: 44 YNTTIKALCQTDN-------------PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
YN I+AL +D+ PL +L ++ RPD+ +FPF+LKA +L
Sbjct: 84 YNAAIRALSLSDDGDRHGHGVVRRCLPLYRALL----RSGTARPDHLTFPFLLKACARLR 139
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
G + GLDSDV VV A + + DAR++FD +R ++ WNT+
Sbjct: 140 EWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVR--DLVSWNTL 197
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKP 208
+ GY + G+ P EA+ LF RM E+ V+P
Sbjct: 198 IGGYVRRGN-------------------------------PAEALELFWRMVAEDAVVRP 226
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
DE+ M+AA+S C Q+ +ELG +H +++ G++ V L NAL+DMY K G + A VF
Sbjct: 227 DEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVF 286
Query: 269 ENMKNKSVITWTTMIAGLALHGL-------------------------------GREALD 297
E +++++V++WTTMI G A GL +EAL
Sbjct: 287 ERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALS 346
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMI 354
+F M+ A V P+EIT + +L+AC +G +E+G RY + + + +I
Sbjct: 347 LFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTS----LI 402
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
D+ + G +++A + + +P E NA W +++ +G
Sbjct: 403 DMYAKCGNIEKAIHIFKEIP-EKNALTWTAMICGLANHG 440
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/467 (40%), Positives = 291/467 (62%), Gaps = 4/467 (0%)
Query: 14 SRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
SR I C S+ YA + + P++++YN I+ ++NP N+ Y K
Sbjct: 53 SRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFG 112
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
L PDN + PF++KA +L +G + H Q + G + D +V +L+ MYAS I AR
Sbjct: 113 LLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAAR 172
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF + ++V W M+AGY + GD +AR LF+ M E+N+++W+T+I+GYA+ +
Sbjct: 173 SVFQRMCR--FDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCF 230
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+A+ F +Q E V +E M+ +S+CA LGA+ +GE H Y+ + L+ + L A+
Sbjct: 231 EKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAV 290
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+DMYA+ G + KA+ VFE + K V+ WT +IAGLA+HG +AL FS M + P +
Sbjct: 291 VDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRD 350
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
ITF A+L+AC H G+VE G F MK +G+EP++E YGCM+DLLGRAG L++AEK +
Sbjct: 351 ITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVL 410
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
+MP + NA IW +LL A I+ +VE+GE + L++++P SG+Y +LSNIYA +W +
Sbjct: 411 KMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKD 470
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
+R++M+D GV+K PG S IE+ +VHEF GD +HP+ +++ +I
Sbjct: 471 VTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERI 517
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 130/295 (44%), Gaps = 14/295 (4%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G +Q+ ++ + + +S+G + A S+F + DV + I + + +A
Sbjct: 144 IKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSAR 203
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L++++ L ++ ++ + + E E G+ ++ V+ +I
Sbjct: 204 ELFDRMPERNL----VTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSC 259
Query: 122 ASCKCIYDARKVFD-----ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
A + K + +LSL N+ + +V YA+ G++ A +FE + EK+V+
Sbjct: 260 AHLGALAMGEKAHEYVMRNKLSL---NLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVL 316
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNY 235
WT LIAG A +A+ F M + P +I A L+AC+ G VE G E +
Sbjct: 317 CWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESM 376
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
+G+ + ++D+ ++GK+ KA + M K + W ++ +H
Sbjct: 377 KRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIH 431
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/488 (39%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 1 MIVRGLDQNNHLLSRFI--DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MIV+G + N L I S + G YA+ +F H ++PD +++NT I+ Q+ +PL
Sbjct: 1 MIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPL 60
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
NA+ LY++++ +RPD ++FPFVLKA +L +++G +H + G +S+ V LI
Sbjct: 61 NAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLI 120
Query: 119 QMYASC------KCIYD-------------------------ARKVFDELSLRVWNVAVW 147
+A+C + ++D AR++FDE+ ++ ++ W
Sbjct: 121 YFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK--DLVSW 178
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+ GYAK G++ +AR LF+ + +++V++W +IAGY +A+ +F M+
Sbjct: 179 NVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL 238
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 266
PDE+ ML+ LSAC LG ++ G+ IH I + G + V L NALIDMYAK G I +AL+
Sbjct: 239 PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALE 298
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ M+ K V TW +++ GLA HG +++ +F+ M + +++P+EITF+ +L AC H G
Sbjct: 299 VFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGR 358
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE GR+YF++M+ Y IEP I YGCM+DLLGRAG L EA + M E NA +W +LL
Sbjct: 359 VEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL 418
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A I+G+VELG A L+K+ SG+Y +LSNIYA G W+ K+RK+M D GV+K
Sbjct: 419 GACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRK 478
Query: 447 MPGCSYIE 454
GCS IE
Sbjct: 479 EAGCSLIE 486
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/475 (41%), Positives = 289/475 (60%), Gaps = 6/475 (1%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L + S +SLG DY+ ++F P V+ + I A+ Y ++ +
Sbjct: 12 LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P+ ++F +++KL IE G+ +H Q V G DSD++V L+ +YA + A++
Sbjct: 72 EPNAFTF----SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD + + ++ M+ YAK G+L+ AR LF+ M E++ + W +I GY Q PN
Sbjct: 128 LFDTMPEK--SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPN 185
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ LFRRM KP+E+ +L+ LSAC QLGA+E G W+H+YIE G+ V + AL+
Sbjct: 186 EALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALV 245
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY+K G + A VF+ + +K V+ W +MI G A+ G +EAL +F M R + P I
Sbjct: 246 DMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNI 305
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TFI ILSAC H G V G FN MK YGIEPKIE YGCM++LLGRAG++++A +L++
Sbjct: 306 TFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKN 365
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
M E + +WG+LL A ++G + LGE ++ L+ NSG Y +LSNIYA +G W+
Sbjct: 366 MNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGV 425
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++R +M+D GVKK PGCS IEV+ +VHEF+AG +HP +Y +L +ING +K
Sbjct: 426 ARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 480
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/469 (39%), Positives = 297/469 (63%), Gaps = 10/469 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
+ Q+++L ++ + C++ +A +F P+++L+N IKA Q +AV +Y
Sbjct: 42 ISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYI 101
Query: 66 KIQASALRP-------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ P D +++PF+LKA + +ELG+++H V +G DS V +LI
Sbjct: 102 RMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLI 161
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+MY + A KVFDE+ R +V WN +++ +A++G + A ALF M +K +++W
Sbjct: 162 EMYTRAGDLALAHKVFDEMRER--DVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTW 219
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T +++GY + A+ FR MQ E +PD+++++A L ACAQLG +ELG WI+ Y ++
Sbjct: 220 TAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKR 279
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+G+ T + NAL++MYAK G I +ALQ+F+ M +K VI+W+T+I GLA HG EA+ +
Sbjct: 280 HGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWL 339
Query: 299 FSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F+ ME+ +V+PN ITF+ +LSAC + GLV+ G +F+ M YG+EP +E YGC++DLL
Sbjct: 340 FTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLL 399
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GR+G ++ A L+R MP A+A +WGSLL+A +GDV+ A + L++LEP + GN
Sbjct: 400 GRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLV 459
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
+L+N+YA RW++ RK +R ++K PGCS IEV V EFVAG+
Sbjct: 460 MLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGE 508
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E A++A L AC + +H ++ + ++ L ++ + ++ A +VF
Sbjct: 14 EDAVMARLRACVTFRDLLR---VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFA 70
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP-------NEITFIAILSACC 322
+++ ++ MI A + R+A+ ++ RM R P + T+ +L AC
Sbjct: 71 QVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 323 HVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
+ELG++ + ++++S G + +I++ RAG L A K+ M E +
Sbjct: 131 GTAALELGKQVHTHVVRS--GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR-ERDVVS 187
Query: 382 WGSLLAA 388
W L++A
Sbjct: 188 WNMLISA 194
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/499 (38%), Positives = 297/499 (59%), Gaps = 7/499 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
++V+G+ N H +F+ + + + DYA + H + P ++ N+ I+A ++ P
Sbjct: 32 LVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTLNSMIRAYSKSSTPS 91
Query: 59 NAVILYNKIQASA---LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
+ Y I S L PDNY+F F+++ +L G +H + G + D HV
Sbjct: 92 KSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQT 151
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
L+ MYA C+ VFD ++ M+ AK GD++ AR +F+ M E++
Sbjct: 152 GLVFMYAELGCLSSCHNVFD--GAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDH 209
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++W +IAGYAQ + EA+ +F MQ+E VK +E++M+ LSAC L ++ G W+H Y
Sbjct: 210 VTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAY 269
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+E+Y + V L AL+DMYAK G + +A+QVF MK ++V TW++ I GLA++G G E+
Sbjct: 270 VERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEES 329
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
LD+F+ M+R V+PN ITFI++L C VGLVE GR++F+ M++ YGI P++E YG M+D
Sbjct: 330 LDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVD 389
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+ GRAG L+EA + MP + W +LL A +Y + ELGE A + +++LE N G
Sbjct: 390 MYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGA 449
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA W +R+ M+ GVKK+PGCS IEV VHEF+ GD SHP +D +
Sbjct: 450 YVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEI 509
Query: 476 YQILCKINGQMKFAEHLQN 494
L +I+ ++ + ++ N
Sbjct: 510 EMKLEEISKCLRLSGYVAN 528
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/462 (41%), Positives = 294/462 (63%), Gaps = 4/462 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI--QASALRPDNYSFPFVLKA 85
+A +F DV +NT I ++ P A+ L+ ++ +A+RPD + +
Sbjct: 174 FARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSG 233
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
++ +ELG+ +H G+ V ++ A++ MY C + A VF+ +S R
Sbjct: 234 CAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNR--TAV 291
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
W TM+ G+A++G + +AR LF+ M E++V W L+AGY Q Q EAI LF MQ
Sbjct: 292 SWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSK 351
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
V P+EI M+ LSAC+QLGA+E+G W+H+YI+++ L+ V L +L+DMYAK G I KA+
Sbjct: 352 VDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAI 411
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VF + ++ +TWT+MI GLA HG EA++ F RM ++P+EITFI +LSACCH G
Sbjct: 412 CVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAG 471
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
LVE GR++F++M ++Y +E K++ Y CMIDLLGRAG+L EAE+L+ MP + +A +WG+L
Sbjct: 472 LVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGAL 531
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
A ++G++ LGE A L++L+P +SG Y +L+N+YA ++ K+R +MR +GV+
Sbjct: 532 FFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVE 591
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K+PGCS IE++ VHEF+ D SH D + +Y L +I QM+
Sbjct: 592 KVPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMR 633
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 211/457 (46%), Gaps = 93/457 (20%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHK-------------------SKPD-VYLYNTTIK 49
+HL+S + S S+ F D + F H S PD + YN +
Sbjct: 30 HHLVSGLLSSHSTSPFIDRLVAAFAHSDPASPRPLLHALAILASLPSPPDSAFPYNAAFR 89
Query: 50 AL--CQTDNPLN--AVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
AL C + ++ + LY + + + RPD+ +FPF++KA +L G +
Sbjct: 90 ALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQK 149
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
G +DV VV A + ++ + AR++FDE +R +V WNT++ GY + G
Sbjct: 150 LGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVR--DVVSWNTLIGGYVRSG------ 201
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSACAQ 222
P EA+ LF R+ + V+PDE+ ++ A+S CAQ
Sbjct: 202 -------------------------LPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQ 236
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
+G +ELG+ +H +++ G+ V L NA++DMY K G + A VFE + N++ ++WTTM
Sbjct: 237 MGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTM 296
Query: 283 IAGLALHGL-------------------------------GREALDMFSRMERARVKPNE 311
I G A G+ G+EA+ +F M++++V PNE
Sbjct: 297 IVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNE 356
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
IT + +LSAC +G +E+G + + R+ + + ++D+ + G +++A +
Sbjct: 357 ITMVNLLSACSQLGALEMGMWVHHYI-DRHKLHLSVALGTSLVDMYAKCGNIKKAICVFN 415
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
+P + NA W S++ +G + Q +I L
Sbjct: 416 EIPVQ-NALTWTSMICGLANHGHADEAIEYFQRMIDL 451
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 38/280 (13%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ LG + A +F + DV+ +N + Q A+ L++++Q S + P+ +
Sbjct: 301 ARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMV 360
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A +L +E+G +H L V + +L+ MYA C I A VF+E+
Sbjct: 361 NLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIP-- 418
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
V N W +M+ G A G +EAI F+R
Sbjct: 419 VQNALTWTSMICGLANHG-------------------------------HADEAIEYFQR 447
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSG 259
M ++PDEI + LSAC G VE G + + +Y L + + +ID+ ++G
Sbjct: 448 MIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAG 507
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREA 295
+ +A Q+ M + + W + +HG LG +A
Sbjct: 508 HLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKA 547
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/485 (39%), Positives = 297/485 (61%), Gaps = 2/485 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G N + + I S G A +F SK DV +N I ++ ++ L+
Sbjct: 149 GFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLF 208
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++++ + P + + VL A KL + +G+ +H ++ + ALI MYA+C
Sbjct: 209 DEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAAC 268
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A +FD + R +V W +V G+ +G + AR F+ M E++ +SWT +I G
Sbjct: 269 GDMDTALGIFDNMKSR--DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDG 326
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y Q+++ E ++LFR MQ N+KPDE M++ L+ACA LGA+ELGEWI YI++ +
Sbjct: 327 YLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKID 386
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ NALIDMY G + KA+++F M ++ I+WT +I GLA++G G EALDMFS+M +
Sbjct: 387 SFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLK 446
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
A + P+E+T I +L AC H G+V+ G+++F M +++GIEP + YGCM+DLLGRAG+L+
Sbjct: 447 ASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLK 506
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA ++++ MP + N+ +WGSLL A ++ D E+ E A Q +++LEP N Y +L NIYA
Sbjct: 507 EAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYA 566
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
RW + ++RK+M D G+KK PGCS IE++ VHEFVAGD HP +Y L +++
Sbjct: 567 ACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSV 626
Query: 485 QMKFA 489
+KFA
Sbjct: 627 DLKFA 631
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 207/433 (47%), Gaps = 74/433 (17%)
Query: 2 IVRGLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I GL N + ++ I C LG +YA +F P+ +++N IK + P +
Sbjct: 43 ICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNS 102
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV +Y ++ + PD Y++PF+LK + + ++ GRE+H V G S+V V ALI
Sbjct: 103 AVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIH 162
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+Y+ + AR VFD S +V WN M++GY N ++
Sbjct: 163 LYSLSGEVSVARGVFDRSS--KGDVVTWNVMISGY------NRSK--------------- 199
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
Q +E++ LF M+ V P I +++ LSAC++L + +G+ +H Y++
Sbjct: 200 ----------QFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDL 249
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG---LALHGLGR--- 293
+ + L NALIDMYA G + AL +F+NMK++ VI+WT ++ G L GL R
Sbjct: 250 KIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYF 309
Query: 294 -------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E L +F M+ A +KP+E T ++IL+AC H+G +E
Sbjct: 310 DKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALE 369
Query: 329 LGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
LG + E KI+ + +ID+ G +++A ++ MP + W +++
Sbjct: 370 LGEWIKAYIDKN---EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKIS-WTAVI 425
Query: 387 --AASNIYGDVEL 397
A N YG+ L
Sbjct: 426 FGLAINGYGEEAL 438
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 170/385 (44%), Gaps = 43/385 (11%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGR------EIHCQTVGTGLDSDVHVVAALIQM 120
I A+ L P P L LS I+ + +IH QT+ TGL S+ V A +I
Sbjct: 2 ISATTLSPPPTHLP-SLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAF 60
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
CK ++GD+ AR +F+ M N W
Sbjct: 61 --CCK-----------------------------HELGDMEYARMVFDTMPGPNHFVWNN 89
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GY+++ PN A++++ M V PDE L + AV+ G +H++I + G
Sbjct: 90 MIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG 149
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
++ V + NALI +Y+ SG++ A VF+ V+TW MI+G E++ +F
Sbjct: 150 FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFD 209
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
MER RV P+ IT +++LSAC + + +G+R +K IEP +ID+
Sbjct: 210 EMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKD-LKIEPVRVLENALIDMYAAC 268
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G + A + M + W +++ G V L A + K+ + ++ +
Sbjct: 269 GDMDTALGIFDNMK-SRDVISWTAIVTGFTNLGQVGL---ARNYFDKMPERDFVSWTAMI 324
Query: 421 NIYAILGRWNESGKIRKVMRDMGVK 445
+ Y + R+ E + + M+ +K
Sbjct: 325 DGYLQVNRFKEVLSLFREMQAANIK 349
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 296/540 (54%), Gaps = 61/540 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G N ++ + + C++L YA +F P++ L+N+ + Q+++
Sbjct: 124 IIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREV 183
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ +++ +RP+ ++FP VLK+ K++ + G ++HC + G + V LI M
Sbjct: 184 VFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDM 243
Query: 121 YASCKCIYDARKVFDELSLR----------------------------------VWNVAV 146
Y++ + DA K+F E+ R +WN+ V
Sbjct: 244 YSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMV 303
Query: 147 --------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
WNT++ GYA G++ LFE M E+N+ SW
Sbjct: 304 SGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNA 363
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI GYA E + F+RM E +V P++ ++ LSACA+LGA++LG+W+H Y E
Sbjct: 364 LIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESS 423
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL V + NAL+DMYAK G I A+ VF M K +I+W T+I GLA+H G +AL++F
Sbjct: 424 GLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLF 483
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M+ A KP+ ITFI IL AC H+GLVE G YF M Y I P+IE YGCM+D+L R
Sbjct: 484 FQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLAR 543
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L++A +R+MP EA+ IW LL A IY +VEL E ALQ LI+LEP N NY +L
Sbjct: 544 AGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVML 603
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIY GRW + +++ MRD G KK+PGCS IEV+ V EF + D HP + +Y +L
Sbjct: 604 SNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVL 663
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 296/540 (54%), Gaps = 61/540 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G N ++ + + C++L YA +F P++ L+N+ + Q+++
Sbjct: 61 IIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREV 120
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ +++ +RP+ ++FP VLK+ K++ + G ++HC + G + V LI M
Sbjct: 121 VFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDM 180
Query: 121 YASCKCIYDARKVFDELSLR----------------------------------VWNVAV 146
Y++ + DA K+F E+ R +WN+ V
Sbjct: 181 YSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMV 240
Query: 147 --------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
WNT++ GYA G++ LFE M E+N+ SW
Sbjct: 241 SGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNA 300
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI GYA E + F+RM E +V P++ ++ LSACA+LGA++LG+W+H Y E
Sbjct: 301 LIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESS 360
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL V + NAL+DMYAK G I A+ VF M K +I+W T+I GLA+H G +AL++F
Sbjct: 361 GLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLF 420
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M+ A KP+ ITFI IL AC H+GLVE G YF M Y I P+IE YGCM+D+L R
Sbjct: 421 FQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLAR 480
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L++A +R+MP EA+ IW LL A IY +VEL E ALQ LI+LEP N NY +L
Sbjct: 481 AGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVML 540
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIY GRW + +++ MRD G KK+PGCS IEV+ V EF + D HP + +Y +L
Sbjct: 541 SNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVL 600
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/485 (39%), Positives = 305/485 (62%), Gaps = 6/485 (1%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
DQ+ ++ I CS+L DYAY +F++ S P+VYLY I + + V LY++
Sbjct: 58 DQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ +++ PDNY V+ +V+K +++ REIH Q + G S V ++++Y
Sbjct: 118 MIHNSVLPDNY----VITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ +A+K+FDE+ R A M+ Y++ G + A LF+ + K+ + WT +I G
Sbjct: 174 LVNAKKMFDEMPDRDHVAAT--VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLV 231
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ + N+A+ LFR MQ+ENV +E + LSAC+ LGA+ELG W+H+++E +
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 291
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ NALI+MY++ G I +A +VF M++K VI++ TMI+GLA+HG EA++ F M
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+PN++T +A+L+AC H GL+++G FN MK + +EP+IE YGC++DLLGR G L+EA
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ + +P E + + G+LL+A I+G++ELGE + L + E +SG Y +LSN+YA
Sbjct: 412 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
G+W ES +IR+ MRD G++K PGCS IEV ++HEF+ GD +HP + +YQ L ++N +
Sbjct: 472 GKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRIL 531
Query: 487 KFAEH 491
+F E+
Sbjct: 532 RFKEN 536
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/482 (39%), Positives = 301/482 (62%), Gaps = 2/482 (0%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L+ +H+ + I +S G + A +F D+ +N I + A+ +Y
Sbjct: 187 LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ ++PD+ + ++ + L + G+E + GL + +V AL+ M++ C
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
I++AR++FD L R + W TM++GYA+ G L+ +R LF+ M EK+V+ W +I G
Sbjct: 307 DIHEARRIFDNLEKRT--IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
Q + +A+ LF+ MQ N KPDEI M+ LSAC+QLGA+++G WIH YIE+Y L+ V
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
L +L+DMYAK G I +AL VF ++ ++ +T+T +I GLALHG A+ F+ M A
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ P+EITFI +LSACCH G+++ GR YF+ MKSR+ + P+++ Y M+DLLGRAG L+E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A++L+ MP EA+AA+WG+LL ++G+VELGE A + L++L+P +SG Y +L +Y
Sbjct: 545 ADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGE 604
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
W ++ + R++M + GV+K+PGCS IEV+ V EF+ D S P+ +++Y L +
Sbjct: 605 ANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRH 664
Query: 486 MK 487
M+
Sbjct: 665 MR 666
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 211/433 (48%), Gaps = 77/433 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI+ GL + SR I C S + DY+ I P+++ +N TI+ +++NP
Sbjct: 76 MIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPK 135
Query: 59 NAVILYNKIQASAL---RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
+ +LY ++ RPD++++P + K L LG I + L+ HV
Sbjct: 136 ESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHN 195
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A I M+ASC + +ARKVFDE +R ++ WN ++ GY K+G
Sbjct: 196 ASIHMFASCGDMENARKVFDESPVR--DLVSWNCLINGYKKIG----------------- 236
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+ +AI +++ M+ E VKPD++ M+ +S+C+ LG + G+ + Y
Sbjct: 237 --------------EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL---- 291
+++ GL +PL NAL+DM++K G I +A ++F+N++ +++++WTTMI+G A GL
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 292 ---------------------------GREALDMFSRMERARVKPNEITFIAILSACCHV 324
G++AL +F M+ + KP+EIT I LSAC +
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 325 GLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
G +++G RY +Y + + ++D+ + G + EA + + N+
Sbjct: 403 GALDVGIWIHRYI----EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLT 457
Query: 382 WGSLLAASNIYGD 394
+ +++ ++GD
Sbjct: 458 YTAIIGGLALHGD 470
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/463 (41%), Positives = 287/463 (61%), Gaps = 4/463 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA+ +F KP V+LYN I+A LY ++ P+ +SF F+ A
Sbjct: 34 YAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACA 93
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
LS+ + GR +H V +G DV + AL+ MYA + ARK FDE+++R +V W
Sbjct: 94 SLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVR--DVPTW 151
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 206
N+M+AGYA+ GDL A LF LM +NV SWT +I+GYAQ Q +A+++F M+ E +
Sbjct: 152 NSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+P+E+ + + L ACA LGA+E+GE I Y G + ++NAL++MYA+ G+I KA
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 267 VFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VFE + + ++ +W +MI GLA+HG EA+++F +M R P+++TF+ +L AC H G
Sbjct: 272 VFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+V G+ +F M+ + I PK+E YGCM+DLLGRAG L+EA L+ RMP E ++ +WG+L
Sbjct: 332 MVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTL 391
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L A + +G VEL E A L +LEP N GNY ILSNIYA GRW+ ++RK+M+ +
Sbjct: 392 LGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKIT 451
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
K G S+IE +H+F+ D SH D +Y +L +++ +MK
Sbjct: 452 KAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKL 494
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++ ++ + A LF+ + + V + LI Y+ ++ +L+ +M ++ P+
Sbjct: 22 LIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPN 81
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------ 257
E + SACA L + + G +H + + G V AL+DMYAK
Sbjct: 82 EHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFD 141
Query: 258 -------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G + AL++F M ++V +WT MI+G A +G +AL M
Sbjct: 142 EMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSM 201
Query: 299 FSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F M E ++PNE+T ++L AC ++G +E+G R + G + ++++
Sbjct: 202 FLMMEEETEMRPNEVTLASVLPACANLGALEVGER-IEVYARGNGYFKNLYVSNALLEMY 260
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
R G + +A + + N W S++ ++G
Sbjct: 261 ARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHG 296
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I+ Y L + LI + I A ++F+ + +V + +I + HG +
Sbjct: 7 IQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQC 66
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 354
++++M PNE +F + SAC + + GR + + +KS +G + + ++
Sbjct: 67 FSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCD--VFALTALV 124
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP-HNS 413
D+ + G L A K M + W S++A GD+ E AL+ L +L P N
Sbjct: 125 DMYAKLGLLSLARKQFDEMTVR-DVPTWNSMIAGYARCGDL---EGALE-LFRLMPARNV 179
Query: 414 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKK---------MPGCS---YIEVSKRVHE 461
++ + + YA G++ ++ + +M + + +P C+ +EV +R+
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 462 FVAGD 466
+ G+
Sbjct: 240 YARGN 244
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/499 (40%), Positives = 311/499 (62%), Gaps = 6/499 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G + + + + I S G + A ++F D+ YNT IK + + P +A
Sbjct: 137 IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 196
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT--GLDSDVHVVAALI 118
+ L+ ++Q S + PD ++F + L+ +G++IH Q +DS++ + +A++
Sbjct: 197 LCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIV 256
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA C I A +VF + + A W++MV GYA+ G++N AR LF M E++VISW
Sbjct: 257 DMYAKCGLINIAERVFSTMGTSK-SAAAWSSMVCGYARCGEINVARKLFNHMHERDVISW 315
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI-HNYIE 237
T +I+GY+Q Q +EA+ LF+ M+ +KPDE+ ++A LSACA+LGA +LG+ + H YIE
Sbjct: 316 TAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIE 375
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KN-KSVITWTTMIAGLALHGLGREA 295
N L A++DMYAK G I AL++F + KN K+ + +MIAGLA HGLG A
Sbjct: 376 NGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETA 435
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F + +KP+E+TF+ +L AC H GL+E G++ F M + YGI+P++E YGCM+D
Sbjct: 436 ITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVD 495
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGR G L+EA L+++MPFEAN+ IW +LL+A +G+V++GE A Q L+++E +
Sbjct: 496 LLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGAR 555
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNI A +W E+ ++RKVM D G++K PG SYIE+ +H FVA D SHP +
Sbjct: 556 YVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEI 615
Query: 476 YQILCKINGQMKFAEHLQN 494
+L + ++K A ++ N
Sbjct: 616 ELMLKDMAMRLKSAGYVPN 634
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 212/440 (48%), Gaps = 75/440 (17%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
IV GL +SR I S LG D ++ +F+ P+++++NT I+ ++DNP
Sbjct: 33 IVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPR 92
Query: 59 NAVILYNKIQASALRP-DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A++LY + A + P +N++FPF+L + +LS++E G E+H + G +SD+ V AL
Sbjct: 93 EAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNAL 152
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I +Y+ + AR +FDE +R ++ +NTM+ GYA+V
Sbjct: 153 IHLYSVFGNLNLARTLFDESLVR--DLVSYNTMIKGYAEV-------------------- 190
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN--Y 235
+QP A+ LF MQ + PDE +A S C+ L +G+ IH Y
Sbjct: 191 -----------NQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVY 239
Query: 236 IEQYGLNTIVPLNNALIDMYAK--------------------------------SGKIGK 263
+++ + L +A++DMYAK G+I
Sbjct: 240 KNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINV 299
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A ++F +M + VI+WT MI+G + G EAL++F ME +KP+E+T +A+LSAC
Sbjct: 300 ARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACAR 359
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA-IW 382
+G +LG+R ++ ++D+ + G + A ++ RR+ ++
Sbjct: 360 LGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVF 419
Query: 383 GSLLAASNIYGDVELGECAL 402
S++A +G LGE A+
Sbjct: 420 NSMIAGLAQHG---LGETAI 436
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 176/368 (47%), Gaps = 35/368 (9%)
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
P L + + + G +IH QT+ GL + ++ LI ++
Sbjct: 10 PSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFS----------------- 52
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ G +K G L+++R LF + N+ W T+I GY++ D P EAI L+
Sbjct: 53 -----------LLG-SKDG-LDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYM 99
Query: 200 RMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
M + + P+ L++CA+L ++E G +H++I ++G + + + NALI +Y+
Sbjct: 100 SMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVF 159
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G + A +F+ + ++++ TMI G A AL +F M+ + + P+E TF+A+
Sbjct: 160 GNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALF 219
Query: 319 SACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
S C + +G++ + + K+ I+ I ++D+ + G + AE++ M
Sbjct: 220 SVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSK 279
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
+AA W S++ G++ + H + + ++ + + Y+ G+ +E+ ++ K
Sbjct: 280 SAAAWSSMVCGYARCGEINVARKLFNH---MHERDVISWTAMISGYSQAGQCSEALELFK 336
Query: 438 VMRDMGVK 445
M +G+K
Sbjct: 337 EMEALGIK 344
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/498 (40%), Positives = 305/498 (61%), Gaps = 13/498 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI+ G + SR + + F DY+ IF + +++NT ++A Q+++
Sbjct: 52 MILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAE 111
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAAL 117
A++LY + + + PDNY++P V++A + +E G +EIH + G DSDV+V L
Sbjct: 112 KALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTL 170
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN---ARALFELMTEKN 174
I MYA C + DARK+FDE V + WN+++AGY K GD+ A LF M EK+
Sbjct: 171 INMYAVCGNMRDARKLFDESP--VLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKD 228
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
++SW+ LI+GY Q EA+ +F M ++ DE+ +++ LSACA L V+ G+ IH
Sbjct: 229 MVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHG 288
Query: 235 YIEQYGLNTIVPLNNALI----DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+ + G+ + V L NALI DMY K G + AL+VF M+ K V +W +I GLA++G
Sbjct: 289 LVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNG 348
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
L +LDMFS M+ V PNEITF+ +L AC H+GLV+ GR +F M ++GIEP ++ Y
Sbjct: 349 LVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHY 408
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GCM+DLLGRAG L EAEKL+ MP + A WG+LL A +GD E+GE + LI+L+P
Sbjct: 409 GCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQP 468
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+ G + +LSNI+A G W + ++R +M+ GV K PGCS IE + VHEF+AGD +HP
Sbjct: 469 DHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHP 528
Query: 471 DFDRLYQILCKINGQMKF 488
+++ +L ++ ++K
Sbjct: 529 WINKVEGMLNEMAKRLKM 546
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/427 (42%), Positives = 276/427 (64%), Gaps = 2/427 (0%)
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
++P+ ++ V+KA ++++E G++ H + G +SDV V AL+ MYA C +
Sbjct: 3 GKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLE 62
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
DA VFD++S R + WN M+ G+A+ D+ A LF M+E++V+SWT +IAGYAQ
Sbjct: 63 DAGHVFDKMSER--STRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+E++ +F +M+ +K D M + LSACA L A+ELG H Y+ Q G + +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
+AL+DMYAKSG + A QVF+ M ++ ++W ++I G A HG G +A+ +F +M +A +K
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PNEI+F+ +LSAC H GLV GR YFN+M YGI P + Y CMIDLLGRAG L EAE
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
+ MP E + ++WG+LL A I+G+ EL + +HL+ +E +G Y +LSNIYA G+
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
W+++ K+RK+M+D GV K PG S+IEV +H FVAG+TSHP +++ L ++ +MK
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420
Query: 489 AEHLQNE 495
A ++ N+
Sbjct: 421 AGYVPNK 427
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 35/264 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F S+ DV + I Q ++ ++N+++ + ++ D + VL A
Sbjct: 95 ALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACAD 154
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L+ +ELGR+ H V +G D+ V +AL+ MYA + DA +VFD++ R N WN
Sbjct: 155 LAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQR--NEVSWN 212
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+++ G A+ G N+A LFE M L AG +KP
Sbjct: 213 SIITGCAQHGRGNDAVLLFEQM----------LQAG---------------------IKP 241
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+EI+ + LSAC+ G V G N + Q YG+ V +ID+ ++G + +A
Sbjct: 242 NEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENF 301
Query: 268 FENMK-NKSVITWTTMIAGLALHG 290
M V W ++ +HG
Sbjct: 302 INGMPVEPDVSVWGALLGACRIHG 325
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/466 (41%), Positives = 292/466 (62%), Gaps = 4/466 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI--QASALRPDNYSFPFVLKAV 86
A +F DV +NT I ++ P A+ L+ ++ A+RPD + +
Sbjct: 175 ARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGC 234
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
++ +ELG+ +H G+ V ++ A++ MY C + A+ VF+ + + V
Sbjct: 235 AQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNK--TVVS 292
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W TM+ G+A++G + +AR LF+ M E++V W L+AGY Q Q EAI LF MQ V
Sbjct: 293 WTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKV 352
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
P+EI M+ LSAC+QLGA+E+G W+H+YI+++ L V L +L+DMYAK G I KA+
Sbjct: 353 DPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F+ + +K+ +TWT MI GLA HG EA++ F RM ++P+EITFI +LSACCH GL
Sbjct: 413 IFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ GR++F++M +Y +E K++ Y CMIDLLGRAG+L EAE+L+ MP + +A +WG+L
Sbjct: 473 VKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALF 532
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A ++G++ LGE A L++L+P +SG Y +L+N+YA ++ K+R +MR +GV+K
Sbjct: 533 FACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEK 592
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
+PGCS IE++ VHEF+ D SH D +Y L I QMK +L
Sbjct: 593 VPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKHTANL 638
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 200/412 (48%), Gaps = 76/412 (18%)
Query: 37 SKPD-VYLYNTTIKAL--CQTDNPLN--AVILYNKIQ-ASALRPDNYSFPFVLKAVVKLS 90
S PD YN +AL C + ++ + LY + +S+ RPD+ +FPF+LKA +L
Sbjct: 76 SPPDSASPYNAAFRALSLCPHRHLVDRHCLPLYRALLCSSSARPDHLTFPFLLKACARLQ 135
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
G + G +DV VV A + W+V+
Sbjct: 136 YRPYGAAVLGHVQKLGFSADVFVVNAGVHF---------------------WSVS----- 169
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN---VK 207
G + AR LF+ ++V+SW TLI GY + P EA+ LF R+ VE+ V+
Sbjct: 170 -------GSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRL-VEDGKAVR 221
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PDE+ M+ A+S CAQ+G +ELG+ +H +++ G+ V L NA++DMY K G + A V
Sbjct: 222 PDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSV 281
Query: 268 FENMKNKSVITWTTMIAGLALHGL-------------------------------GREAL 296
FE + NK+V++WTTMI G A G+ G+EA+
Sbjct: 282 FERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAI 341
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+F M+ ++V PNEIT + +LSAC +G +E+G + + R+ + + ++D+
Sbjct: 342 ALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYI-DRHQLYLSVALGTSLVDM 400
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
+ G +++A + + +P + NA W +++ +G + Q +I L
Sbjct: 401 YAKCGNIKKAICIFKEIP-DKNALTWTAMICGLANHGHADEAIEYFQRMIDL 451
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 38/280 (13%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ LG + A +F + DV+ +N + Q A+ L++++Q S + P+ +
Sbjct: 301 ARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMV 360
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A +L +E+G +H L V + +L+ MYA C I A +F E+ +
Sbjct: 361 NLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDK 420
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N W M+ G A G +EAI F+R
Sbjct: 421 --NALTWTAMICGLANHG-------------------------------HADEAIEYFQR 447
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSG 259
M ++PDEI + LSAC G V+ G + + E+Y L + + +ID+ ++G
Sbjct: 448 MIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAG 507
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREA 295
+ +A Q+ M + + W + +HG LG +A
Sbjct: 508 HLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKA 547
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 293/473 (61%), Gaps = 5/473 (1%)
Query: 1 MIVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL Q + L + I + SS +A +F P YLYNT + + PL
Sbjct: 11 LITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMFRVYAASPTPL 70
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+A++L+ + PD Y+FPF+LKA L+ + G+E+HCQ + GL V V +LI
Sbjct: 71 HALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFGLGGHVFVENSLI 130
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y S + AR+VFD + R ++A W T++A YA + AR +F+ M E++VIS+
Sbjct: 131 HLYGSNSGMDSARRVFDGMGYR--DIASWTTLLACYANSCSVKAARKVFDEMPERSVISY 188
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+ +IA Y + ++ EA+ LFR + ++P + +++ L ACA LGA+++G W+++Y+ Q
Sbjct: 189 SAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWVYSYVCQ 248
Query: 239 YGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ + + ALIDM+ K G I AL VFE K K V WT M++GLA+HGLG + ++
Sbjct: 249 SKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGEQLIE 308
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F +M + VKPN +TF+A+LS C H GLV G YF+ M+S +G+EP +E +GC++DLL
Sbjct: 309 AFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFGCVVDLL 368
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG + +A +L+ MPFE NAAIWGSLL A +Y +VE+GE A Q LIK EP N Y
Sbjct: 369 GRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQWLIKDEPWNGALYM 428
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
L ++Y GRW+E K++ M+++G +K PGCS IEV +EFV GD SHP
Sbjct: 429 TLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSHP 481
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/478 (39%), Positives = 293/478 (61%), Gaps = 2/478 (0%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+ G D N + FI S D A +F +V +N + + +
Sbjct: 134 VKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSK 193
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+L+ +++ + P++ + +L A KL +E G+ I+ G ++ ++ + LI M+
Sbjct: 194 MLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMF 253
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A+C + +A+ VFD + R +V W ++V G+A +G ++ AR F+ + E++ +SWT +
Sbjct: 254 AACGEMDEAQSVFDNMKNR--DVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAM 311
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I GY +M++ EA+ LFR MQ+ NVKPDE M++ L+ACA LGA+ELGEW+ YI++ +
Sbjct: 312 IDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSI 371
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ NALIDMY K G +GKA +VF+ M +K TWT MI GLA++G G EAL MFS
Sbjct: 372 KNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSN 431
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M A + P+EIT+I +L AC H G+VE G+ +F M ++GI+P + YGCM+DLLGRAG
Sbjct: 432 MIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAG 491
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L+EA +++ MP + N+ +WGSLL A ++ +V+L E A + +++LEP N Y +L N
Sbjct: 492 RLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCN 551
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
IYA RW ++RK+M + G+KK PGCS +E++ V+EFVAGD SHP +Y L
Sbjct: 552 IYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 609
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 201/428 (46%), Gaps = 68/428 (15%)
Query: 2 IVRGLDQNNHLLSRFIDSCSS--LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I GL + R I C + G YA +F +P ++++NT IK + ++P N
Sbjct: 31 IKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQN 90
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V +Y + AS ++PD ++FPF+LK + ++ G+ + V G DS++ V A I
Sbjct: 91 GVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIH 150
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
M++ C+ + ARKVFD W V WN M++GY +V ++
Sbjct: 151 MFSLCRLVDLARKVFDMGD--AWEVVTWNIMLSGYNRVKQFKKSK--------------- 193
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LF M+ V P+ + ++ LSAC++L +E G+ I+ YI
Sbjct: 194 ----------------MLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGG 237
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---LGR--- 293
+ + L N LIDM+A G++ +A VF+NMKN+ VI+WT+++ G A G L R
Sbjct: 238 IVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYF 297
Query: 294 -------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
EAL +F M+ + VKP+E T ++IL+AC H+G +E
Sbjct: 298 DQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALE 357
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
LG + + I+ +ID+ + G + +A+K+ + M + W +++
Sbjct: 358 LG-EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM-HHKDKFTWTAMIVG 415
Query: 389 SNIYGDVE 396
I G E
Sbjct: 416 LAINGHGE 423
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/478 (41%), Positives = 297/478 (62%), Gaps = 13/478 (2%)
Query: 28 YAYSIFTHKS-KPDVYLYNTTIKALCQTDNPL---NAVILYNKIQASALRPDNYSFPFVL 83
YA IF + K + +++N I+A+ +P + + +Y +++ + PD ++FPF+L
Sbjct: 9 YANPIFHIRHLKLESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLL 68
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ + LG+ H Q + GLD D V +L+ MY+SC + A ++FDE + +
Sbjct: 69 PSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSK--D 126
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN++V YAK G +N+AR LF+ M E+NVISW+ LI GY + EA+ LFR MQ+
Sbjct: 127 LPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 186
Query: 204 EN-----VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
V P++ M LSAC +LGA+E G+W+H+YI++YG+ + L ALIDMYAK
Sbjct: 187 PKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKC 246
Query: 259 GKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIA 316
G + +A +VF+ + K V ++ MI LA++GL E +FS M + + PN +TF+
Sbjct: 247 GSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVG 306
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
IL AC H GL+ G+ YF +M +GI P I+ YGCM+DL GR+G ++EAE + MP E
Sbjct: 307 ILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME 366
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
+ IWGSLL+ S + GD++ E AL+ LI+L+P NSG Y +LSN+YA GRW E +IR
Sbjct: 367 PDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIR 426
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M G+KK+PGCSY+EV VHEFV GD S + +R+Y +L +I +++ A ++ +
Sbjct: 427 HEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSD 484
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/498 (39%), Positives = 301/498 (60%), Gaps = 6/498 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M++RGL + S+ + +S G D + S+F +P L+N+ I+A +
Sbjct: 96 MLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERT 155
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V Y + + D ++FPFVLK+ V+L ++ +G+ +H + GL D++V +LI +
Sbjct: 156 VATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIIL 215
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C I DA KVFD +++R +V+ WN ++AGY K G ++ A A+FE M +N++SWTT
Sbjct: 216 YGKCGEINDAGKVFDNMTIR--DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTT 273
Query: 181 LIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+I+GY+Q +A++LF M E+ V+P+ + +++ L ACAQL +E G IH +
Sbjct: 274 MISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR 333
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREAL 296
GLN+ + AL MYAK G + A F+ N K++I W TMI A +G G +A+
Sbjct: 334 MGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAV 393
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
F M +A ++P++ITF +LS C H GLV++G +YFN M + Y I P++E Y C+ DL
Sbjct: 394 STFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADL 453
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG L EA KL+ MP A +IWGSLLAA + ++E+ E A + L LEP N+GNY
Sbjct: 454 LGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNY 513
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSN+YA GRW E K+R +++ G KK PGCS+IE++ + H F+ GDTSHP +Y
Sbjct: 514 VLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIY 573
Query: 477 QILCKINGQMKFAEHLQN 494
L + +MK A + +
Sbjct: 574 MFLEALPEKMKAAGYFPD 591
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 18/253 (7%)
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
L ++LG +H ++ GL + + ++ YA SG I ++ VF + S + + +M
Sbjct: 83 LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSM 142
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I A +G + + M + TF +L + + V +G+ ++ R G
Sbjct: 143 IRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLIL-RIG 201
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
++ + +I L G+ G + +A K+ M + + W +LLA G + + AL
Sbjct: 202 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR-DVSSWNALLAGYTKSGCI---DAAL 257
Query: 403 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKI--RKVMRDMGVKK--------MPGC-- 450
++ N ++ + + Y+ G ++ + V D GV+ +P C
Sbjct: 258 AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQ 317
Query: 451 -SYIEVSKRVHEF 462
S +E +++HE
Sbjct: 318 LSTLERGRQIHEL 330
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 302/492 (61%), Gaps = 11/492 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSL--GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL ++ LSR + CS G +A+ +F P + + NT IKA +N +
Sbjct: 32 GLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTMIKAFVLKGKLINTIQ 91
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
+Y+++ + L PDNY+ P+VLKA L + LG H Q+V G D+ V LI MY+
Sbjct: 92 IYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTLIAMYS 151
Query: 123 SCKCIYDARKVFDELSLRVWNVAV-WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
S + AR +FDE+ W+ AV W M++GYAKVGD+ AR LF+ K+ W ++
Sbjct: 152 SFGNVRAARCIFDEMP---WHTAVSWTVMISGYAKVGDVETARMLFDEAPMKDRGIWGSI 208
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+GY Q + E + +FR MQ ++PDE +++ L ACA LGA+E+G W+H Y++Q G
Sbjct: 209 ISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEIGVWVHRYLDQLGH 268
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V L+ LIDMYAK G + A ++F+ M + I W MI+G+A++G G AL +FS
Sbjct: 269 PLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMAMNGDGDNALRLFSE 328
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
ME+A VKP++ITFIAI +AC + G+ R N M + Y +EPK E YGC++DLLGRAG
Sbjct: 329 MEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSEHYGCIVDLLGRAG 388
Query: 362 YLQEAEKLLRRMPFEAN----AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
L+EA++L+ +MP ++ A W +LL+A +G E+ E A Q L LE H+SG Y
Sbjct: 389 LLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAEDAAQRLFHLE-HHSGAYV 447
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSN+YA G+ + +IRK+M + GV K PGCS ++++ VHEF+AG+ +H + +++
Sbjct: 448 LLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVKINGVVHEFIAGEETHLQMEEVHR 507
Query: 478 ILCKINGQMKFA 489
+L K+N QM ++
Sbjct: 508 VLEKMNKQMGYS 519
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/481 (40%), Positives = 306/481 (63%), Gaps = 10/481 (2%)
Query: 15 RFIDSCSSLGFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNK--IQASA 71
+FI SS G ++ IF H S P+++ YN +KA Q + + +N + +A
Sbjct: 63 KFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNA 122
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY--ASCKCIYD 129
PD Y+F VLKA L+ + G+++HC G +S++ V +L+ +Y C CI
Sbjct: 123 PNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCI-- 180
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A+K+FDE+ +R +V WNT+++GY G ++ AR +F+ M EKN++SW+T+I+GYA+ +
Sbjct: 181 AQKLFDEMVVR--DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNE 238
Query: 190 QPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+ +AI LFR+MQ E + P+++ +++ LSACA LGA++LG+WIH +I + + + L
Sbjct: 239 KYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLG 298
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
NAL DMYAK G + +A VF M + VI+W+ +I GLA++G EA + F+ M ++
Sbjct: 299 NALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLE 358
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PN+I+F+ +L+AC H GLV+ G YF++M YGI PKIE YGC++DLL RAG L +AE
Sbjct: 359 PNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAES 418
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP + N +WG+LL IY D E GE + +++L+ ++SG+ L+N+YA +GR
Sbjct: 419 LINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGR 478
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+++ R MRD K PGCS+IE++ V+EF GD+SHP R+Y ++ ++ +MK
Sbjct: 479 LDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKV 538
Query: 489 A 489
A
Sbjct: 539 A 539
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/500 (38%), Positives = 297/500 (59%), Gaps = 39/500 (7%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D HL+ + + + YAY++FT P+V+ +NT I+ ++DNP A + Y +
Sbjct: 52 DMGKHLIFTIVSLSAPM---SYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQ 108
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ S + PD +++PF+LKA+ K + G IH T+ G +S V V +L+ +YA+C
Sbjct: 109 MVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAAC-- 166
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
GD +A +FELM E+++++W ++I G+A
Sbjct: 167 -------------------------------GDTESAYKVFELMKERDLVAWNSMINGFA 195
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+PNEA+TLFR M VE V+PD +++ LSA A+LGA+ELG +H Y+ + GL+
Sbjct: 196 LNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSH 255
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+L+D+YAK G I +A +VF M ++ ++WT++I GLA++G G EAL++F ME
Sbjct: 256 VTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQG 315
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+ P+EITF+ +L AC H G+++ G YF MK GI P+IE YGCM+DLL RAG +++A
Sbjct: 316 LVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQA 375
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ ++ MP + NA IW +LL A I+G + LGE A HL+ LEP +SG+Y +LSN+YA
Sbjct: 376 YEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASE 435
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW++ IR+ M GVKK PG S +E+ RV+EF GD SHP +Y +L KI +
Sbjct: 436 RRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELL 495
Query: 487 K---FAEHLQNEFSGVLESD 503
K + H N + + E +
Sbjct: 496 KLEGYVPHTANVLADIEEEE 515
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/484 (39%), Positives = 306/484 (63%), Gaps = 9/484 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSS-LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL ++ SR + C+S G +YAY +FT P+++++NT I+ Q+ P N
Sbjct: 19 LIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIRGFSQSSTPHN 78
Query: 60 AVILYNKI--QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ L+ + + +P ++P V KA +L G ++H + + GL++D + +
Sbjct: 79 AISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTI 138
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ MY +C + +A+++FD + ++V WNTM+ G AK G+++ +R LF+ M +N +S
Sbjct: 139 LNMYVNCGFLGEAQRIFDGAT--GFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVS 196
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI- 236
W ++I+GY + + EA+ LF RMQ E +KP E M++ L+ACA LGA+ GEWIH+YI
Sbjct: 197 WNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIV 256
Query: 237 -EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ LN+IV A+IDMY+K G I KALQVF++ K + W ++I GLA+ G G EA
Sbjct: 257 KNNFALNSIVI--TAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSGRGNEA 314
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +FS++E + +KP+ ++FI +L+AC H G+V+ + YF +M Y IEP I+ Y CM+D
Sbjct: 315 VRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYSCMVD 374
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+LGRAG L+EAE+L++ MP +A IWGSLL++ YG++E+ + A + + +L+P+ S +
Sbjct: 375 VLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRVNELDPNESSS 434
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+ +LSN+YA + E+ + R +++ + K PGCS IEV+ VHEFVAG HP +
Sbjct: 435 FILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVHEFVAGGRLHPRSKDI 494
Query: 476 YQIL 479
Y L
Sbjct: 495 YHAL 498
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/475 (41%), Positives = 294/475 (61%), Gaps = 4/475 (0%)
Query: 15 RFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
R I C S+ G +AY +F + +++NT ++A P + LY + ++
Sbjct: 50 RIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGF 109
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P+NY+F F+L+A +LS + G +H Q V G ++ V L+ +YASC C+ AR+
Sbjct: 110 LPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARR 169
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD R +V W ++ GYAK G + AR LF+ M EKN +SW+ +I GYAQ+
Sbjct: 170 LFDGSVNR--DVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFR 227
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ LF MQ+ +P+ A++ AL+ACA LGA++ G WIH Y+++ + L ALI
Sbjct: 228 EALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALI 287
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G + A +VF+ M ++ V +T++I+GLA HG A++MF+RM+ V PNE+
Sbjct: 288 DMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEV 347
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TFI +LSAC VGLVE G R F M + YGIEP ++ YGC++DLLGRAG L++A++++R
Sbjct: 348 TFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVRE 407
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP E ++ + G+LL A ++GDVELG+ ++ L + + G + +LSN+YA +W +
Sbjct: 408 MPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDV 467
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K+RK M + VKK+PGCS IEV V EFVAGD SH D + +L I+ +K
Sbjct: 468 AKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLK 522
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/488 (41%), Positives = 293/488 (60%), Gaps = 36/488 (7%)
Query: 1 MIVRGLDQNNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+IV GL+ +L F+ + G DYA+ +F S+PD++++NT I+ QT P
Sbjct: 36 LIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPA 95
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
AV LY +++ +RPD ++F FVLKA KLS ++LG IH + + +G S+ V LI
Sbjct: 96 TAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLI 155
Query: 119 QMYASC------KCIYDA-------------------------RKVFDELSLRVWNVAVW 147
+A+C + ++DA R++FDE+ ++ ++ W
Sbjct: 156 YFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMK--DLVSW 213
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+ YAK G++ AR LF+ + +K+V++W +IAGY EA+ +F M+ +
Sbjct: 214 NVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQR 273
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 266
PD++ ML+ LSA A LG +E+G+ IH I + V L+NALIDMYAK G IG AL+
Sbjct: 274 PDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALE 333
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ M+ K +W ++I GLALHG E++++F M R ++KPNEITF+A+L AC H G
Sbjct: 334 VFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGK 393
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V GR YFN+MK+ + IEP I+ YGCM+D+LGRAG L EA + M E NA IW +LL
Sbjct: 394 VREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLL 453
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A ++GDVELG A + L+K+ SG+Y +LSNIYA G W+ K+RK+M D GVKK
Sbjct: 454 GACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKK 513
Query: 447 MPGCSYIE 454
G S I+
Sbjct: 514 KVGHSLID 521
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/482 (40%), Positives = 302/482 (62%), Gaps = 7/482 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + ++ + +D + +G +F + DV +N I + +AV ++
Sbjct: 162 GLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVF 221
Query: 65 NKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++Q S+LRP+ + L A + L +ELG+EIH + V L + + AL+ MY
Sbjct: 222 RRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH-RYVREQLGFTIKIGNALVDMYCK 280
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + AR++F+++ ++ V W +MV+GY G L+ AR LFE ++V+ WT +I
Sbjct: 281 CGHLSIAREIFNDMPIK--TVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMIN 338
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q ++ ++A+ LFR MQ++ V PD ++A L+ CAQLG +E G+WIH YI++ +
Sbjct: 339 GYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMI 398
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ ALI+MYAK G I K+L++F +K K +WT++I GLA++G +AL++F+ M
Sbjct: 399 DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMV 458
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ VKP++ITFI +LSAC H GLVE GR++F M + Y IEPK+E YGC+IDLLGRAG L
Sbjct: 459 QTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQL 518
Query: 364 QEAEKLLRRMPFEANAAI---WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
EAE+L+ + P N I +G+LL+A +G+VE+GE + L+ +E +S + +L+
Sbjct: 519 DEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLA 578
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
NIYA RW + K+R+ M+D+GVKK+PGCS +EV+ VHEF+ GD SHP+ +Y +L
Sbjct: 579 NIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLD 638
Query: 481 KI 482
I
Sbjct: 639 SI 640
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 212/425 (49%), Gaps = 74/425 (17%)
Query: 5 GLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
G Q+ L++F+ C+ S+G YA IF + P +++YN IKA + + AV+
Sbjct: 59 GFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVL 118
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+ +++ L PDN+++PFV KA+ L + G +++ V +GL+ D +V +L+ MYA
Sbjct: 119 LFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYA 178
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ + R+VF+E+ R +V WN +++GY K
Sbjct: 179 EVGRVQNLRQVFEEMPQR--DVVSWNVLISGYVKC------------------------- 211
Query: 183 AGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYG 240
+ +A+ +FRRMQ + +++P+E +++ LSAC L +ELG+ IH Y+ EQ G
Sbjct: 212 ------RRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLG 265
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + NAL+DMY K G + A ++F +M K+VI WT+M++G G EA ++F
Sbjct: 266 FT--IKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFE 323
Query: 301 R-------------------------------MERARVKPNEITFIAILSACCHVGLVEL 329
R M+ RV P+ T +A+L+ C +G +E
Sbjct: 324 RSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQ 383
Query: 330 GRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ I +++ I+ + +I++ + G+++++ ++ + E + A W S++
Sbjct: 384 GKWIHGYIDENKIMIDAVVGT--ALIEMYAKCGFIEKSLEIFNGLK-EKDTASWTSIICG 440
Query: 389 SNIYG 393
+ G
Sbjct: 441 LAMNG 445
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 177/368 (48%), Gaps = 31/368 (8%)
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
+G+L+ A +F + + + +I + + +A+ LFR+++ E + PD
Sbjct: 79 IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
A LG V GE ++ ++ + GL + N+L+DMYA+ G++ QVFE M + V
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 277 ITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
++W +I+G +A+D+F RM +++ ++PNE T ++ LSAC + ++ELG+
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHR 258
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
++ + G KI ++D+ + G+L A ++ MP + W S+++ G V
Sbjct: 259 YVREQLGFTIKIGN--ALVDMYCKCGHLSIAREIFNDMPIKT-VICWTSMVS-----GYV 310
Query: 396 ELGEC-ALQHLIKLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK------- 446
G+ + L + P + + + N Y R++++ + R+M +K+
Sbjct: 311 NCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVAL---FREMQIKRVSPDRFT 367
Query: 447 ----MPGCSY---IEVSKRVHEFVAGDTSHPDFDRLY-QILCKINGQMKFAEHLQNEFSG 498
+ GC+ +E K +H ++ D + D + L ++ + F E F+G
Sbjct: 368 LVALLTGCAQLGTLEQGKWIHGYI--DENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNG 425
Query: 499 VLESDVAS 506
+ E D AS
Sbjct: 426 LKEKDTAS 433
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/475 (41%), Positives = 294/475 (61%), Gaps = 4/475 (0%)
Query: 15 RFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
R I C S+ G +AY +F + +++NT ++A P + LY + ++
Sbjct: 25 RIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGF 84
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P+NY+F F+L+A +LS + G +H Q V G ++ V L+ +YASC C+ AR+
Sbjct: 85 LPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARR 144
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD R +V W ++ GYAK G + AR LF+ M EKN +SW+ +I GYAQ+
Sbjct: 145 LFDGSVNR--DVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFR 202
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ LF MQ+ +P+ A++ AL+ACA LGA++ G WIH Y+++ + L ALI
Sbjct: 203 EALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALI 262
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G + A +VF+ M ++ V +T++I+GLA HG A++MF+RM+ V PNE+
Sbjct: 263 DMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEV 322
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TFI +LSAC VGLVE G R F M + YGIEP ++ YGC++DLLGRAG L++A++++R
Sbjct: 323 TFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVRE 382
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP E ++ + G+LL A ++GDVELG+ ++ L + + G + +LSN+YA +W +
Sbjct: 383 MPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDV 442
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K+RK M + VKK+PGCS IEV V EFVAGD SH D + +L I+ +K
Sbjct: 443 AKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLK 497
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 295/556 (53%), Gaps = 64/556 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G N ++ + S L +A +F H P V L+N +
Sbjct: 90 IITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREV 149
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ K+++ +RP+ ++FP VLK+ K+ G EIHC+ + GL+ + V LI +
Sbjct: 150 VFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDV 209
Query: 121 YAS-------------------------------CKCIYDARKVFD---ELSLRVWNVAV 146
Y+ C + AR++FD E + +WN+ V
Sbjct: 210 YSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMV 269
Query: 147 --------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
WNTM+ GYA GD+ LFE M E+NV SW
Sbjct: 270 SGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNG 329
Query: 181 LIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI GYA E + F+RM ++ V P++ ++ LSACA+LGA++LG+W+H Y
Sbjct: 330 LIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATI 389
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + + NALIDMY+K G I A++VFE+M K +ITW +MI GLA HG G +AL +F
Sbjct: 390 GFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLF 449
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M+ KP+ ITFI +L +C H+GLVE G YFN M + Y I P+IE YGCM+DL GR
Sbjct: 450 HQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGR 509
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L A + ++RMP EA+A IW +LL A IY +++L E ALQ LI LEP N NY +L
Sbjct: 510 AGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLL 569
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIY LGRW + +++ +MRD G KK+PGCS IEV+ V EF + D H +Y +L
Sbjct: 570 SNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVL 629
Query: 480 CKINGQMKFAEHLQNE 495
G MK E
Sbjct: 630 ---KGLMKLLRSFGYE 642
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 18/277 (6%)
Query: 117 LIQMYASCKCIYDARKVFDELSLR--VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
I + SCK + +KV ++ +N V +V + + + +AR LF+ +
Sbjct: 70 FISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPK 129
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V W + GY E + LF +M+ +V+P+ L +CA++GA GE IH
Sbjct: 130 VELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHC 189
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH---GL 291
+ + GL + LID+Y+ IG A ++F M ++++ WT+MI+G L L
Sbjct: 190 EVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVAL 249
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
R D+ ER V N ++S +G ++ R+ F+ M R +
Sbjct: 250 ARRLFDLAP--ERDVVLWN-----IMVSGYIEIGDMKAARKLFDTMPYR-----DTMSWN 297
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
M++ G ++ E+L MP E N W L+
Sbjct: 298 TMLNGYANNGDVEACEQLFEEMP-ERNVFSWNGLIGG 333
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/512 (38%), Positives = 293/512 (57%), Gaps = 61/512 (11%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F +P+ ++N + Q ++ + ++L+ +++ + P+ ++FP +LK+ VK
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS------------------------- 123
++ ++ G E+HC + +G ++ V LI MYAS
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 124 ------CKCIYDARKVFD---ELSLRVWNVAV--------------------------WN 148
C + AR++FD E + +WN + WN
Sbjct: 124 INGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWN 183
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVK 207
T++ GYA GD+ LFE M E+NV SW LI GY + +E ++ F+RM V+ V
Sbjct: 184 TVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVV 243
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P++ ++ LSACA+LGA++LG+W+H Y E +G V + NAL+DMYAK G + AL V
Sbjct: 244 PNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDV 303
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F++M NK +I+W T+I GLA+HG G +AL++FS M+ A P+ ITFI IL AC H+GLV
Sbjct: 304 FKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLV 363
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E G YF M Y I P+IE YGC++DLLGRAG L A +R+MP EA+A IW +LL
Sbjct: 364 EDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLG 423
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A +Y +VEL E AL+ LI+ EP N NY +LSNIY GRW + +++ MRD G KK+
Sbjct: 424 ACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKL 483
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
PGCS IEV+ + EF + D HP+ +++Y L
Sbjct: 484 PGCSLIEVNDYLVEFYSLDERHPEKEQIYGTL 515
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 14/231 (6%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+ NA +F+ + E N W + GY+Q + + I LFR+M+ +V P+ L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C ++ A++ GE +H ++ + G + LIDMYA G I A +VF M ++VI W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNE--ITFIAILSACCHVGLVELGRRYFNIM 337
T MI G D+ + + P + + ++S V R F+ M
Sbjct: 121 TAMINGYI------TCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKM 174
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
++ + + +++ G + E+L MP E N W +L+
Sbjct: 175 PNK-----DVMSWNTVLNGYASNGDVMACERLFEEMP-ERNVFSWNALIGG 219
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/484 (40%), Positives = 300/484 (61%), Gaps = 14/484 (2%)
Query: 2 IVR-GLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDN- 56
I+R GL +NHL+ I+ C+ SD YA +F +PD +LYNT IK +
Sbjct: 45 IIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKGFLHSQLL 104
Query: 57 PLNAVIL-YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
P N+++L Y+ + +++ P+N++FP +L A K I+ G +IH G + +
Sbjct: 105 PTNSILLLYSHMLQNSVLPNNFTFPSLLIACRK---IQHGMQIHAHLFKFGFGAHSVCLN 161
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+LI MY + + + +AR+VF + + W ++++GY+K G ++ A +F+LM +KN
Sbjct: 162 SLIHMYVTFQALEEARRVFHTIPHP--DSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNS 219
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP-DEIAMLAALSACAQLGAVELGEWIHN 234
SW ++A Y Q ++ +EA LF RM+ EN D+ LSAC LGA++ G+WIH
Sbjct: 220 ASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHE 279
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK--NKSVITWTTMIAGLALHGLG 292
YI++ G+ L A++DMY K G + KALQVF ++ + + +W MI GLA+HG G
Sbjct: 280 YIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNG 339
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
A+ +F MER RV P++ITF+ +L+AC H GLVE GR YF+ M YGIEP++E +GC
Sbjct: 340 EAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGC 399
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLLGRAG + EA KL+ MP + + G+LL A + ++ELGE + +I+LEP+N
Sbjct: 400 MVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNN 459
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
SG Y +L+N+YA G+W ++ K+RK+M D GVKK PG S IE+ VHEF+AG+ +HP
Sbjct: 460 SGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQA 519
Query: 473 DRLY 476
L+
Sbjct: 520 KELH 523
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/549 (38%), Positives = 294/549 (53%), Gaps = 64/549 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G N ++ + S L +A +F H P V L+N +
Sbjct: 48 IITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREV 107
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ K+++ +RP+ ++FP VLK+ K+ G EIHC+ + GL+ + V LI +
Sbjct: 108 VFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDV 167
Query: 121 YAS-------------------------------CKCIYDARKVFD---ELSLRVWNVAV 146
Y+ C + AR++FD E + +WN+ V
Sbjct: 168 YSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMV 227
Query: 147 --------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
WNTM+ GYA GD+ LFE M E+NV SW
Sbjct: 228 SGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNG 287
Query: 181 LIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI GYA E + F+RM ++ V P++ ++ LSACA+LGA++LG+W+H Y
Sbjct: 288 LIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATI 347
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + + NALIDMY+K G I A++VFE+M K +ITW +MI GLA HG G +AL +F
Sbjct: 348 GFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLF 407
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M+ KP+ ITFI +L +C H+GLVE G YFN M + Y I P+IE YGCM+DL GR
Sbjct: 408 HQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGR 467
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L A + ++RMP EA+A IW +LL A IY +++L E ALQ LI LEP N NY +L
Sbjct: 468 AGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLL 527
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIY LGRW + +++ +MRD G KK+PGCS IEV+ V EF + D H +Y +L
Sbjct: 528 SNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVL 587
Query: 480 CKINGQMKF 488
G MK
Sbjct: 588 ---KGLMKL 593
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 18/277 (6%)
Query: 117 LIQMYASCKCIYDARKVFDELSLR--VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
I + SCK + +KV ++ +N V +V + + + +AR LF+ +
Sbjct: 28 FISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPK 87
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V W + GY E + LF +M+ +V+P+ L +CA++GA GE IH
Sbjct: 88 VELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHC 147
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH---GL 291
+ + GL + LID+Y+ IG A ++F M ++++ WT+MI+G L L
Sbjct: 148 EVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVAL 207
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
R D+ ER V N ++S +G ++ R+ F+ M R +
Sbjct: 208 ARRLFDLAP--ERDVVLWN-----IMVSGYIEIGDMKAARKLFDTMPYR-----DTMSWN 255
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
M++ G ++ E+L MP E N W L+
Sbjct: 256 TMLNGYANNGDVEACEQLFEEMP-ERNVFSWNGLIGG 291
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 316/541 (58%), Gaps = 39/541 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
I G+D +++ + + I C+ + SD YA + +PD +++NT ++ ++D P
Sbjct: 195 FIKSGVDTDSYFIGKLILHCA-ISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEP 253
Query: 58 LNAVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
N+V ++ ++ + PD++SF FV+KA ++ G ++HCQ + GLDS + V
Sbjct: 254 HNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATT 313
Query: 117 LIQMYASCKCIYDARKVFDEL---SLRVWNVAV--------------------------W 147
LI MY C C+ ARKVFDE+ +L WN V W
Sbjct: 314 LIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSW 373
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+AGY K G+L A+ +F M ++ +SW+T+I G++ NE+ + FR + ++
Sbjct: 374 NVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMR 433
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+E+++ LSAC+Q GA E G+ +H ++E+ G + IV +NNALIDMY++ G + A V
Sbjct: 434 PNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLV 493
Query: 268 FENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
FE M+ K S+++WT+MIAGLA+HG G EA+ +F+ M + V P+EI+FI++L AC H GL
Sbjct: 494 FEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGL 553
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++ G YF+ MK Y IEP +E YGCM+DL GR+G LQ+A + +MP A +W +LL
Sbjct: 554 IKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLL 613
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A + +G++EL E Q L +L+P+NSG+ +LSN+YA G+W + IRK M +KK
Sbjct: 614 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKK 673
Query: 447 MPGCSYIEVSKRVHEFVAGDTSH----PDFDRLYQILCKINGQMKFAEHLQNEFSGVLES 502
+ S +EV K +++F A + ++L +I+ ++ + +A + + V E
Sbjct: 674 ITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEEE 733
Query: 503 D 503
+
Sbjct: 734 E 734
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/510 (39%), Positives = 307/510 (60%), Gaps = 37/510 (7%)
Query: 15 RFIDSCSSLGFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNK--IQASA 71
+FI SS G ++ IF H S P+++ YN +KA Q + + +N + +A
Sbjct: 63 KFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNA 122
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY--ASCKCIYD 129
PD Y+F VLKA L+ + G+++HC G +S++ V +L+ +Y C CI
Sbjct: 123 PNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCI-- 180
Query: 130 ARKVFDELSLR---VWNVAV--------------------------WNTMVAGYAKVGDL 160
A+K+FDE+ +R WN + W+TM++GYA+VG+L
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNL 240
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSA 219
AR LFE M +NV+SW +IAGYAQ ++ +AI LFR+MQ E + P+++ +++ LSA
Sbjct: 241 EEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSA 300
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
CA LGA++LG+WIH +I + + + L NAL DMYAK G + +A VF M + VI+W
Sbjct: 301 CAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISW 360
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
+ +I GLA++G EA + F+ M ++PN+I+F+ +L+AC H GLV+ G YF++M
Sbjct: 361 SIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQ 420
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
YGI PKIE YGC++DLL RAG L +AE L+ MP + N +WG+LL IY D E GE
Sbjct: 421 VYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGE 480
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
+ +++L+ ++SG+ L+N+YA +GR +++ R MRD K PGCS+IE++ V
Sbjct: 481 RVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSV 540
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+EF GD+SHP R+Y ++ ++ +MK A
Sbjct: 541 YEFFMGDSSHPQSLRIYSMIRELKWKMKVA 570
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/513 (39%), Positives = 303/513 (59%), Gaps = 49/513 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIF------THKSKPDVYLYNTTIKALCQTDNP- 57
GL N +L++F + S YA S+ T D +L+NT I+A QT +
Sbjct: 149 GLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIRAFAQTTHSK 208
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+A+ YN ++ A+ P+ ++FPFVLKA + +ELG +H V G + D HV L
Sbjct: 209 PHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTL 268
Query: 118 IQMYASCKCIYD-------ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
+ MY C C D A+KVFDE ++ + W+ M+ GYA+ G N+AR
Sbjct: 269 VHMY--CCCCQDGSSGPVSAKKVFDESPVK--DSVTWSAMIGGYARAG--NSAR------ 316
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
A+TLFR MQV V PDEI M++ LSACA LGA+ELG+
Sbjct: 317 -----------------------AVTLFREMQVTGVCPDEITMVSVLSACADLGALELGK 353
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
W+ +YIE+ + V L NALIDM+AK G + +A++VF MK +++++WT+MI GLA+HG
Sbjct: 354 WLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHG 413
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
G EA+ +F M V P+++ FI +LSAC H GLV+ G YFN M++ + I PKIE Y
Sbjct: 414 RGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHY 473
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GCM+D+L RAG + EA + +R MP E N IW S++ A + G+++LGE + LI+ EP
Sbjct: 474 GCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREP 533
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+ NY +LSNIYA L RW + K+R++M G++K+PG + IE++ ++EFVAGD SH
Sbjct: 534 SHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHD 593
Query: 471 DFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+ +Y+++ ++ ++K A ++ +L+ D
Sbjct: 594 QYKEIYEMVEEMGREIKRAGYVPTTSQVLLDID 626
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 297/489 (60%), Gaps = 4/489 (0%)
Query: 1 MIVRG-LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
M+++ L + +L+ I+ S G D A+ +FT+ DV +N I A P
Sbjct: 198 MVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDK 257
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A++L+ +++ ++P+ + VL A K +E GR I G + + A++
Sbjct: 258 ALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLD 317
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C CI DA+ +F+++S + ++ W TM+ G+AK+G+ + A +F+ M K +W
Sbjct: 318 MYVKCGCINDAKDLFNKMSEK--DIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWN 375
Query: 180 TLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
LI+ Y Q +P A++LF MQ+ ++ KPDE+ ++ AL A AQLGA++ G WIH YI++
Sbjct: 376 ALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKK 435
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ +N L +L+DMYAK G + KA++VF ++ K V W+ MI LA++G G+ ALD+
Sbjct: 436 HDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDL 495
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
FS M A +KPN +TF IL AC H GLV G + F M+ YGI P+I+ Y C++D+ G
Sbjct: 496 FSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFG 555
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L++A + +MP AA+WG+LL A + +G+VEL E A Q+L++LEP N G + +
Sbjct: 556 RAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVL 615
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNIYA G W + +RK+MRD VKK P CS I+V+ VHEF+ GD SHP ++Y
Sbjct: 616 LSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSK 675
Query: 479 LCKINGQMK 487
L +I+ + K
Sbjct: 676 LDEISEKFK 684
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 206/440 (46%), Gaps = 75/440 (17%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY-NKIQASALRPD 75
I SCS L YA ++F +P++Y +NT I+ + +P + +++ + + + + P+
Sbjct: 116 ISSCSCL---IYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPN 172
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++FPF+ KA +L + LG +H + L SD+ ++ +LI Y S A +VF
Sbjct: 173 KFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFT 232
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ + +V WN M+ +A +G L P++A+
Sbjct: 233 NMPGK--DVVSWNAMINAFA-LGGL------------------------------PDKAL 259
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF+ M++++VKP+ I M++ LSACA+ +E G WI +YIE G + LNNA++DMY
Sbjct: 260 LLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMY 319
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLA---------------------------- 287
K G I A +F M K +++WTTM+ G A
Sbjct: 320 VKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALIS 379
Query: 288 ---LHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
+G R AL +F M+ ++ KP+E+T I L A +G ++ G + ++ ++ I
Sbjct: 380 AYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDI 438
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
++D+ + G L +A ++ + + +W +++ A +YG G+ AL
Sbjct: 439 NLNCHLATSLLDMYAKCGNLNKAMEVFHAVE-RKDVYVWSAMIGALAMYGQ---GKAALD 494
Query: 404 HLIK-LEPHNSGNYAILSNI 422
LE + N +NI
Sbjct: 495 LFSSMLEAYIKPNAVTFTNI 514
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/500 (39%), Positives = 304/500 (60%), Gaps = 14/500 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV G Q N LL + + + G A+ +F P ++N I+ Q++ P
Sbjct: 41 IIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKL 100
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V LYN++ + P+ +++ F++ + + G ++H + V G ++V V +L+ +
Sbjct: 101 VELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNL 160
Query: 121 YA---SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
YA + AR+VFDE+ R N+ WN+++AGY + GD++ AR +F+ M E+NV+S
Sbjct: 161 YAIAGGYDGVRKARRVFDEIVDR--NIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVS 218
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WTT+IAG AQ+ + +A+ LF M+ VK D++A++AALSACA+LG ++LG WIH+YI+
Sbjct: 219 WTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYID 278
Query: 238 Q--YGLNT--IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ + N +V LNN+LI MYA G I KA +VF M+ +S I+WT+MI G A G
Sbjct: 279 ERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAE 338
Query: 294 EALDMFSRMERARV---KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EAL +F M+R +P+ ITFI +L AC H G V+ GR +F M ++GI P+IE Y
Sbjct: 339 EALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHY 398
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL-IKLE 409
GCM+DLL RAG+L EA +L+ MP + N A+WG+LL I+ + EL Q L ++L+
Sbjct: 399 GCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLALELK 458
Query: 410 PHNSGNY-AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
P + Y +LSN+YA RW + +R+ M ++GV+K G S+++++ VH+FVAGD +
Sbjct: 459 PDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWT 518
Query: 469 HPDFDRLYQILCKINGQMKF 488
H +Y++L KI Q K
Sbjct: 519 HKHASSVYEMLSKITRQAKL 538
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 146/355 (41%), Gaps = 71/355 (20%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
TI+ ++IH Q + G ++ L+ Y + + +A KVF+ + + VWN M
Sbjct: 30 TIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENP--STTVWNQM 87
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
I G++Q + P++ + L+ RM +P+E
Sbjct: 88 -------------------------------IRGHSQSETPHKLVELYNRMVEAEAEPNE 116
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA-------------- 256
+ CA+ + GE +H + G T V + +L+++YA
Sbjct: 117 FTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRV 176
Query: 257 --------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ G + A ++F+ M ++V++WTTMIAG A G ++AL
Sbjct: 177 FDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQAL 236
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY--GIEP-KIEQYGCM 353
+F M RA VK +++ +A LSAC +G ++LG + + R G +P + +
Sbjct: 237 HLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSL 296
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
I + G + +A K+ M + + W S++ G E Q + +L
Sbjct: 297 IHMYASCGVIDKAYKVFIGMQQRSTIS-WTSMITGFAKQGHAEEALGVFQWMQRL 350
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 11/252 (4%)
Query: 201 MQVENVKPDEIAMLAAL-----SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
M VE P + L AL S ++ + IH I G + L L+ Y
Sbjct: 1 MLVEEASPANLTGLRALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFY 60
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
SG + A +VFE ++N S W MI G + + +++++RM A +PNE T+
Sbjct: 61 ITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYS 120
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP- 374
++ C L+ G + + + G + +++L AG K R
Sbjct: 121 FLIGGCARSRLLREGEQVHGRVVAN-GYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDE 179
Query: 375 -FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
+ N W SLLA GDV + A + ++ N ++ + A +GR ++
Sbjct: 180 IVDRNIVSWNSLLAGYVRCGDV---DGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQAL 236
Query: 434 KIRKVMRDMGVK 445
+ MR GVK
Sbjct: 237 HLFHEMRRAGVK 248
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 296/498 (59%), Gaps = 41/498 (8%)
Query: 12 LLSRFIDSCS---SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
+L++FI+ CS + +A+ +F +PD+ L+NT + +TD PL A L+ +I
Sbjct: 54 VLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQIL 113
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
S L PD+Y+FP +LKA +E GR++HC + GL +V+V LI MY +C +
Sbjct: 114 FSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMD 173
Query: 129 DARKVFDELSLRVWN--VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
AR+VFD ++W V +N M+ GYA+
Sbjct: 174 CARRVFD----KIWEPCVVTYNAMITGYAR------------------------------ 199
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+PNEA++LFR +Q N+KP ++ ML+ LS+CA LGA++LG+W+H Y+++ G N V
Sbjct: 200 -GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVK 258
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
++ ALIDMYAK G + A+ VFENM + W+ MI A+HG G +A+ +F M +A
Sbjct: 259 VDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG 318
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+P+EITF+ +L AC H GLVE G YF M+ +YG+ P I+ YGCM+DLLGRAG L+EA
Sbjct: 319 TEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEA 378
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ + +P +W +LL+A +G+VELG+ ++ + +L+ + G+Y ILSN+ A
Sbjct: 379 YEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARA 438
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW + +RK+M + GV K+PGCS +EV+ VHEF +GD H +L+Q L ++ ++
Sbjct: 439 GRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKEL 498
Query: 487 KFAEHLQNEFSGVLESDV 504
K ++ N S V +D+
Sbjct: 499 KLVGYVPNT-SLVFHADM 515
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/481 (39%), Positives = 287/481 (59%), Gaps = 6/481 (1%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G YA +F P + N+ I+ + P A++ Y + L PD ++FP +
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
K+ L G+++HC + G SD ++ L+ MY++C C+ ARKVFD++ + +
Sbjct: 86 KSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK--S 140
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
V W TM+ YA+ + A LF M N+ W +I G+ + EA++LF MQ
Sbjct: 141 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQ 200
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ VK D++ M + L AC LGA+ELG+W+H YIE+ + V L AL+DMYAK G I
Sbjct: 201 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A++VF+ M K V+TWT +I GLA+ G G +AL++F M+ + VKP+ ITF+ +L+AC
Sbjct: 261 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLV G YFN M ++YGI+P IE YGCM+D+LGRAG + EAE L++ MP + +
Sbjct: 321 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 380
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
LL+A I+G++ + E A Q LI+L+P N G Y +LSNIY+ + W + K+R++M +
Sbjct: 381 VGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 440
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLES 502
+KK PGCS IEV VHEFV GD SHP +Y+ L + ++K A ++ ++ + +
Sbjct: 441 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDM 500
Query: 503 D 503
D
Sbjct: 501 D 501
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/519 (37%), Positives = 302/519 (58%), Gaps = 30/519 (5%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI Q+ L+++FI +CS+L + A S F + P+V ++N I+ A
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQA 60
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ Y + + + P +YSF ++KA L G +H G DS V V LI+
Sbjct: 61 LVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEF 120
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTMV 151
Y++ + +R+VFD++ R W NVA WN M+
Sbjct: 121 YSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMI 180
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
GY K+G+ +A LF M +++ISWTT++ Y++ + E I LF + + + PDE+
Sbjct: 181 DGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEV 240
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
M +SACA LGA+ LG+ +H Y+ G + V + ++LIDMYAK G I AL VF +
Sbjct: 241 TMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKL 300
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ K++ W +I GLA HG EAL MF MER R++PN +TFI+IL+AC H G +E GR
Sbjct: 301 QTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGR 360
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
R+F M Y I P++E YGCM+DLL +AG L++A +++R M E N+ IWG+LL +
Sbjct: 361 RWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKL 420
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-KKMPGC 450
+ ++E+ A+Q+L+ LEP NSG+Y++L N+YA RWNE KIR M+D+GV K+ PG
Sbjct: 421 HKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGS 480
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
S++E++K VH F A DT HP + +L+ +L +++ Q++ A
Sbjct: 481 SWVEINKTVHLFAASDTYHPSYSQLHLLLAELDDQLRLA 519
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/485 (38%), Positives = 298/485 (61%), Gaps = 8/485 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGF--SDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+++ GLDQ+ ++L++ I + + L Y SIF + P+ +LYN I+ +
Sbjct: 69 ILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYLIEERLK 128
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAAL 117
+ Y+ ++ + P +++F + KA + LGR+IH QT+ G D+HV ++
Sbjct: 129 ESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSM 188
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY C + RKVFDE+ R +V W +++ Y K G++ +A LF+ + K++++
Sbjct: 189 IDMYIKCGFLECGRKVFDEMPNR--DVISWTELISAYVKSGNMESAGELFDGLPVKDMVA 246
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WT +++G+AQ +P EAI F +MQ V+ DEI ++ +SACAQLGA + +WI + E
Sbjct: 247 WTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAE 306
Query: 238 --QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++G V + +ALIDMY+K G +G A +VF+ MK ++V ++++MI G A+HG +A
Sbjct: 307 KSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDA 366
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F M + +KPN +TFI +L+AC H G+VE G + F +M+ YGI+P + Y CM+D
Sbjct: 367 MKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVD 426
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG LQEA +L++ MP E + +WG+LL A I+ ++ A HL +LEP+ GN
Sbjct: 427 LLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGN 486
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDR 474
Y +L+NIYA GRWN+ +RK+MR G++K P S+IE K VHEF +GD +HP
Sbjct: 487 YILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGE 546
Query: 475 LYQIL 479
+ Q L
Sbjct: 547 IKQAL 551
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 136/347 (39%), Gaps = 65/347 (18%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
+++H + + GLD +V+A LI+ D +
Sbjct: 63 KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPL---------------------- 100
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
++F + N + LI GY ++ E+ + M+ E V P A
Sbjct: 101 ---------SIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTA 151
Query: 216 ALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
AC V LG IH I G + + N++IDMY K G + +VF+ M N+
Sbjct: 152 LFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNR 211
Query: 275 SVIT-------------------------------WTTMIAGLALHGLGREALDMFSRME 303
VI+ WT M++G A + REA+ F +M+
Sbjct: 212 DVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQ 271
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGY 362
V+ +EIT I ++SAC +G + ++ KS +G + + +ID+ + G
Sbjct: 272 EFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGS 331
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ +A ++ + M E N + S++ ++G V ++K E
Sbjct: 332 VGDAYRVFQGMK-ERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTE 377
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/500 (39%), Positives = 303/500 (60%), Gaps = 14/500 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV G Q N LL + + + G A+ +F P ++N I+ Q++ P
Sbjct: 57 IIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKL 116
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V LYN++ + P+ +++ F++ + + G ++H + V G ++V V +L+ +
Sbjct: 117 VELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYCTNVFVRTSLVNL 176
Query: 121 YA---SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
YA + AR+VFDE+ R N+ WN+++AGY + GD++ AR +F+ M E+NV+S
Sbjct: 177 YAIAGGYDGVRKARRVFDEIVDR--NIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVS 234
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WTT+IAG AQ+ + +A+ LF M+ VK D++A++AALSACA+LG ++LG WIH+YI+
Sbjct: 235 WTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYID 294
Query: 238 Q--YGLNT--IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ + N +V LNN+LI MYA G I KA +VF M+ +S I+WT+MI G A G
Sbjct: 295 ERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAE 354
Query: 294 EALDMFSRMERARV---KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EAL +F M+R +P+ ITFI +L AC H G V+ GR +F M ++GI P+IE Y
Sbjct: 355 EALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHY 414
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI-KLE 409
GCM+DLL RAG+L EA +L MP + N A+WG+LL I+ + EL Q L+ +L+
Sbjct: 415 GCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLVLELK 474
Query: 410 PHNSGNY-AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
P + Y +LSN+YA RW + +R+ M ++GV+K G S+++++ VH+FVAGD +
Sbjct: 475 PDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWT 534
Query: 469 HPDFDRLYQILCKINGQMKF 488
H +Y++L KI Q K
Sbjct: 535 HKHASSVYEMLSKITRQAKL 554
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 159/388 (40%), Gaps = 73/388 (18%)
Query: 48 IKALCQTDNP--LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT 105
I+ L DNP + +Y+ I + ++ + + + TI+ ++IH Q +
Sbjct: 1 IEILXDVDNPNVVKCHDMYDHIGEIQVLLEHMDDGSLEETHITCDTIKKLKQIHTQIIVN 60
Query: 106 GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARA 165
G ++ L+ Y + + +A KVF+ + + VWN M
Sbjct: 61 GFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENP--STTVWNQM--------------- 103
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 225
I G++Q + P++ + L+ RM +P+E + CA+
Sbjct: 104 ----------------IRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXL 147
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYA----------------------------- 256
+ GE +H + G T V + +L+++YA
Sbjct: 148 LREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSL 207
Query: 257 -----KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+ G + A ++F+ M ++V++WTTMIAG A G ++AL +F M RA VK ++
Sbjct: 208 LAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQ 267
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRY--GIEP-KIEQYGCMIDLLGRAGYLQEAEK 368
+ +A LSAC +G ++LG + + R G +P + +I + G + +A K
Sbjct: 268 VALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYK 327
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ M + + W S++ G E
Sbjct: 328 VFIGMQQRSTIS-WTSMITGFAKQGHAE 354
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH I G + L L+ Y SG + A +VFE ++N S W MI G +
Sbjct: 53 IHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSET 112
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+ +++++RM A +PNE T+ ++ C L+ G + + + G +
Sbjct: 113 PHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVAN-GYCTNVFVRT 171
Query: 352 CMIDLLGRAGYLQEAEKLLRRMP--FEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+++L AG K R + N W SLLA GDV + A + ++
Sbjct: 172 SLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDV---DGARRIFDEMP 228
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
N ++ + A +GR ++ + MR GVK
Sbjct: 229 ERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVK 264
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 301/479 (62%), Gaps = 15/479 (3%)
Query: 35 HKSKPDV--YLYNTTIKALCQT--DNPL--NAVILYNKIQASALRPDNYSFPFVLKAVVK 88
H S P++ +++N I+A ++ NP A+ LY +++ A+ PD ++FPF+L+++
Sbjct: 16 HLSHPNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSI-- 73
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+T GR++H Q + GL +D V +LI MY+SC AR+ FDE++ ++ WN
Sbjct: 74 -NTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQP--DLPSWN 130
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV---EN 205
++ AK G ++ AR LF+ M EKNVISW+ +I GY + A++LFR +Q
Sbjct: 131 AIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQ 190
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
++P+E M + LSACA+LGA++ G+W+H YI++ G+ V L +LIDMYAK G I +A
Sbjct: 191 LRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAK 250
Query: 266 QVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+F+N+ K V+ W+ MI ++HGL E L++F+RM V+PN +TF+A+L AC H
Sbjct: 251 CIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHG 310
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV G YF M + YG+ P I+ YGCM+DL RAG +++A +++ MP E + IWG+
Sbjct: 311 GLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGA 370
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL + I+GDVE E A+ L++L+P NS Y +LSN+YA LGRW E +R +M G+
Sbjct: 371 LLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGI 430
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
KK+PGCS +EV + EF AGD SHP+ LY +L +I +++ + +N +L+ D
Sbjct: 431 KKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLD 489
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 300/481 (62%), Gaps = 4/481 (0%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
S G D A +FT + DV +N+ I Q +P A+ L+ K+++ ++ + +
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL A K+ +E GR++ ++ ++ + A++ MY C I DA+++FD + +
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK- 296
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ W TM+ GYA D AR + M +K++++W LI+ Y Q +PNEA+ +F +
Sbjct: 297 -DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 202 QVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
Q++ N+K ++I +++ LSACAQ+GA+ELG WIH+YI+++G+ + +ALI MY+K G
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ K+ +VF +++ + V W+ MI GLA+HG G EA+DMF +M+ A VKPN +TF + A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H GLV+ F+ M+S YGI P+ + Y C++D+LGR+GYL++A K + MP + +
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+WG+LL A I+ ++ L E A L++LEP N G + +LSNIYA LG+W ++RK MR
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 500
G+KK PGCS IE+ +HEF++GD +HP +++Y L ++ ++K + + E S VL
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK-SNGYEPEISQVL 654
Query: 501 E 501
+
Sbjct: 655 Q 655
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 218/437 (49%), Gaps = 72/437 (16%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY-NKIQASALRPDNYSF 79
SS +YA +F KP+ + +NT I+A +P+ ++ + + + S P+ Y+F
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
PF++KA ++S++ LG+ +H V + + SDV V +LI Y SC
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC--------------- 179
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
GDL++A +F + EK+V+SW ++I G+ Q P++A+ LF+
Sbjct: 180 ------------------GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+M+ E+VK + M+ LSACA++ +E G + +YIE+ +N + L NA++DMY K G
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLAL------------------------------- 288
I A ++F+ M+ K +TWTTM+ G A+
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 289 HGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G EAL +F ++ + +K N+IT ++ LSAC VG +ELGR + +K ++GI
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNF 400
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
+I + + G L+++ ++ + + + +W +++ ++G G A+ K
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEAVDMFYK 456
Query: 408 LEPHN-SGNYAILSNIY 423
++ N N +N++
Sbjct: 457 MQEANVKPNGVTFTNVF 473
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPD 209
+A + L AR +F+ + + N +W TLI YA P +I F M E+ P+
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ + A A++ ++ LG+ +H + + + V + N+LI Y G + A +VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
+K K V++W +MI G G +AL++F +ME VK + +T + +LSAC + +E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 330 GRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR+ + I ++R + + M+D+ + G +++A++L M E + W ++L
Sbjct: 251 GRQVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG 307
Query: 389 SNIYGDVE 396
I D E
Sbjct: 308 YAISEDYE 315
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/537 (36%), Positives = 313/537 (58%), Gaps = 39/537 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL + + + + C+ + SD YA +F H PD +++NT I++L + PL+++
Sbjct: 29 GLHTDPLVFGKLLLHCA-ITISDALHYALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSL 87
Query: 62 ILYNKIQ-ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +++ L PD+++F F LKAV + G ++H Q G D+ + V LI M
Sbjct: 88 HPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISM 147
Query: 121 YASCKCIYDARKVFDELS-----------------------------LRVWNVAVWNTMV 151
YA C AR+VFDE+S + V N+ WN M+
Sbjct: 148 YAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGML 207
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
AGYAK G+L AR +F M ++ +SW+T+I G+A +EA FR + E ++ +E+
Sbjct: 208 AGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEV 267
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
++ LSACAQ GA E G+ +H ++E+ G + +NNALID Y+K G + A VF+NM
Sbjct: 268 SLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNM 327
Query: 272 K-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
+S+++WT++IAGLA+HG G EA+ +F ME + V+P+ ITFI++L AC H GLVE G
Sbjct: 328 PVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEG 387
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
F+ MK+ YGIEP IE YGCM+DL GRA LQ+A + + MP NA IW +LL A +
Sbjct: 388 CGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACS 447
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
I+G++E+ E L +++P NSG++ +LSN+YA+ G+W + IR+ M + +KK PG
Sbjct: 448 IHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGW 507
Query: 451 SYIEVSKRVHEFVAG----DTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
S IE+ K ++ FVAG + + ++L +I+ ++ + +A L++ + E +
Sbjct: 508 SMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEE 564
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 297/477 (62%), Gaps = 3/477 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G Q+ ++ + SCS DYA IF + P+VYLY I + N +A
Sbjct: 72 LIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDA 131
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY+++ ++ PDNY +LKA + GRE+H + + GL S+ V ++++
Sbjct: 132 IQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMEL 191
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + DAR+VF+E+ +V M++ Y+ G + A A+F + K+ + WT
Sbjct: 192 YGKCGELGDARRVFEEMP---EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTA 248
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I G+ + ++ N A+ FR MQ ENV+P+E ++ LSAC+QLGA+E+G W+H+Y+ ++
Sbjct: 249 MIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + + NALI+MY++ G I +A VF+ MK++ VIT+ TMI+GL+++G R+A+++F
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M R++P +TF+ +L+AC H GLV+ G + F+ M YG+EP+IE YGCM+DLLGR
Sbjct: 369 VMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV 428
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L+EA L+R M + + G+LL+A ++ ++ELGE + L +SG Y +LS
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLS 488
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
++YA G+W E+ ++R M++ G++K PGCS IEV+ +HEF+ GD HP +R+Y+
Sbjct: 489 HVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYE 545
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 73/339 (21%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGRE---------IHCQTVGTGLDSDVHVVAALIQMYASC 124
P++ S P LK++ + I L + IH Q + G D +V L++ + C
Sbjct: 35 PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 94
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I + A +F+ NV +T LI G
Sbjct: 95 HAI---------------------------------DYASRIFQYTHNPNVYLYTALIDG 121
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+ +AI L+ RM +++ PD M + L AC A+ G +H+ + GL++
Sbjct: 122 FVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSN 181
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENM------------------------------KNK 274
+ ++++Y K G++G A +VFE M + K
Sbjct: 182 RLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRK 241
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+ WT MI G + AL+ F M+ V+PNE T + +LSAC +G +E+GR
Sbjct: 242 DTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 301
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ M+ ++ IE + +I++ R G + EA+ + M
Sbjct: 302 SYMR-KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/492 (42%), Positives = 306/492 (62%), Gaps = 17/492 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS---DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI L + +SR I CS G S DYA S+F+ P+ +++ IK T NP
Sbjct: 29 MIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNP 88
Query: 58 LNAVILYNKIQASALRPDN---YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
+ ++ILY ++ S L + +S P VLKA KL + GR++H Q + T L D V
Sbjct: 89 VESLILYARM-LSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVG 147
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
++++MY I AR+VFD + R +V WN+M+AGY K G++ A+ +FE M++K+
Sbjct: 148 NSMVRMYIDFGEIELARRVFDRMPNR--DVVSWNSMIAGYLKAGEIELAKKVFETMSDKD 205
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V++WT++I+ Y Q P +A+ LFR M ++PD A+++ LSA A LG VE G+W+H
Sbjct: 206 VVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHA 265
Query: 235 YIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVI-TWTTMIAGLALHGLG 292
Y+ + + +ALIDMY+K G I A VF ++ ++ I W +MI+GLA+HGL
Sbjct: 266 YVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLA 325
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
REALD+F MER ++PNEITF+ +LS C H GLVE G+ YF M +Y I P+I+ YGC
Sbjct: 326 REALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGC 385
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
MIDL GRAG L++A +++ MPFEA+ W ++L+AS +G +E+G+ A I+L P +
Sbjct: 386 MIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDD 445
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
S +Y +LSNIYA GRW++ KIR +MR GVKK+ GCS + V+ +VHEF+ G +
Sbjct: 446 SSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLG----KEL 501
Query: 473 DRLY--QILCKI 482
D Y Q+L KI
Sbjct: 502 DSSYSGQVLAKI 513
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/469 (40%), Positives = 287/469 (61%), Gaps = 3/469 (0%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F PD +N I CQ + +A+ L+ +++S ++PD+ VL A
Sbjct: 178 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ GR IH G D H+ ALI MYA+C + ARK++D LS + ++ V M+
Sbjct: 238 LSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSK--HLIVSTAML 295
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
+GYAK+G + +AR +F+ M E++++ W+ +I+GYA+ DQP EA+ LF M + PD+I
Sbjct: 296 SGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQI 355
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
ML+ +SAC+ +GA+ WIH Y+++ G + +NNALIDMYAK G + KA +VFENM
Sbjct: 356 TMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM 415
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K+VI+W++MI A+HG A+ +F RM+ ++PN +TFI +L AC H GLVE G
Sbjct: 416 PRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGE 475
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
+ F+ M + +GI P E YGCM+DL RA +L++A +L+ MPF N IWGSL++A +
Sbjct: 476 KLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQV 535
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+G+ ELGE A + L++LEP + G +LSNIYA RWN+ G IRK M G+ K S
Sbjct: 536 HGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASS 595
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 500
IE++ +VH F+ D H D +Y+ L ++ ++K + + SG+L
Sbjct: 596 RIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGY-KPSTSGIL 643
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 174/397 (43%), Gaps = 67/397 (16%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLS 90
+F+ P + N ++ L ++ P + LY+ ++A +A D +SFP +LKAV K+S
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
G EIH G D + LI MYASC+ I DA
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDA-------------------- 175
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
R LF+ M + ++W +I GY Q ++A+ LF M+ ++KPD
Sbjct: 176 -------------RLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDS 222
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM---------------- 254
+ + LSAC G + G IH +++ G L ALI+M
Sbjct: 223 VILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDG 282
Query: 255 ---------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
YAK G + A +F+ M + ++ W+ MI+G A +EAL +F
Sbjct: 283 LSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLF 342
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + R P++IT ++++SAC HVG + + + R G + +ID+ +
Sbjct: 343 DEMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNALIDMYAK 401
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
G L +A ++ MP N W S++ A ++G+ +
Sbjct: 402 CGNLVKAREVFENMP-RKNVISWSSMINAFAMHGNAD 437
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/485 (37%), Positives = 294/485 (60%), Gaps = 5/485 (1%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L R +C + + + H+ DV ++ I CQ+ +A++L+ +++ +
Sbjct: 163 LVRMYAACGRIAEARLMFDKMFHR---DVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNV 219
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD VL A + + G+ IH + + D H+ +AL+ MYASC + A
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+F++++ + N+ MV GY+K+G + NAR++F M +K+++ W+ +I+GYA+ D P
Sbjct: 280 LFEKMTPK--NLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQ 337
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ LF MQ +KPD++ ML+ ++ACA LGA++ +WIH ++++ G +P+NNALI
Sbjct: 338 EALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALI 397
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
+MYAK G + +A ++F+ M K+VI+WT MI+ A+HG AL F +ME ++PN I
Sbjct: 398 EMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGI 457
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +L AC H GLVE GR+ F M + + I PK YGCM+DL GRA L+EA +L+
Sbjct: 458 TFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEA 517
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP N IWGSL+AA ++G++ELGE A + L++L+P + G + LSNIYA RW +
Sbjct: 518 MPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDV 577
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
G++RK+M+ G+ K GCS E++ +HEF+ D SH D +Y+ L ++ ++K +
Sbjct: 578 GQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYS 637
Query: 493 QNEFS 497
N S
Sbjct: 638 PNTCS 642
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 217/439 (49%), Gaps = 70/439 (15%)
Query: 6 LDQNNHLLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
LD++ LL + + S +L S DYA S+F KP+ +L N ++ L +++ P +++Y
Sbjct: 51 LDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVY 110
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ L D +SFP +LKA+ ++ ++ G EIH G DSD V L++MYA+C
Sbjct: 111 ERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAAC 170
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I +AR +FD++ R +V W+ M+ GY + G N+A LFE
Sbjct: 171 GRIAEARLMFDKMFHR--DVVTWSIMIDGYCQSGLFNDALLLFE---------------- 212
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
M+ NV+PDE+ + LSAC + G + G+ IH++I + +
Sbjct: 213 ---------------EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVD 257
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENM--KN----------------------------- 273
L +AL+ MYA G + AL +FE M KN
Sbjct: 258 PHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVK 317
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
K ++ W+ MI+G A +EAL++F+ M+ +KP+++T +++++AC H+G ++ ++
Sbjct: 318 KDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA-KW 376
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
++ + G + +I++ + G L+ A ++ +MP N W +++A ++G
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHG 435
Query: 394 DVELGECALQHLIKLEPHN 412
D AL+ ++E N
Sbjct: 436 D---AGSALRFFHQMEDEN 451
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 296/489 (60%), Gaps = 4/489 (0%)
Query: 1 MIVRGL-DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL Q NHL SS +A +F P YLYNT + + PL+
Sbjct: 11 LITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFRVYAASPTPLH 70
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A++L+ + PD Y+FPF+LKA L+ + G+E+HCQ + GL V V +LI
Sbjct: 71 ALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLGGHVFVENSLIH 130
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+Y S + AR+VFD + R ++A W T++A YA + AR +F+ M E++V+S++
Sbjct: 131 LYGSNSRMDSARRVFDGMGYR--DIASWTTLLACYANSCSVEAARKVFDEMPERSVVSYS 188
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQ 238
++A Y + ++ EA+ LFR + ++P + +++ L ACA LGA+++G W+++++
Sbjct: 189 AMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWVYSFVCHS 248
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G + ALIDM+ K G I AL VFE K K V WT M++GLA+HGLG + ++
Sbjct: 249 KGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGEQLIEA 308
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M + +KP+E+TF+A+LS C H GLV G YF+ M+S +G+EP +E +GC++DLLG
Sbjct: 309 FEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFGCVVDLLG 368
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG + +A +L+ MPFE NAAIWG+LL A +Y +VE+GE A Q LIK EP N Y
Sbjct: 369 RAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIKDEPWNGALYMT 428
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L ++Y GRW+E K++ M+++G +K PGCS IEV +EFV GD SHP +
Sbjct: 429 LLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSHPCAVEICLN 488
Query: 479 LCKINGQMK 487
L K N + K
Sbjct: 489 LSKANMEFK 497
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/495 (37%), Positives = 304/495 (61%), Gaps = 18/495 (3%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP---LNAVILYNKIQASA-LRPDNYSFPFV 82
DYA ++F +P+ + +NT ++ L +T++ A++L++ + ++P+ ++FP V
Sbjct: 69 DYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSV 128
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF-------- 134
LKA + S + G++IH V G D V++ L++MY C + DA +F
Sbjct: 129 LKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 135 ----DELSLRVW--NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
EL R NV +WN M+ G ++GD+ +A+ LF+ M +++V+SW +I+GYAQ
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQN 248
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
EAI LF+ MQ N+ P+ + +++ L A A++GA+ELG+WIH Y + + L
Sbjct: 249 GHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLG 308
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
+AL+DMY+K G I +ALQVFE + ++ ITW+ +I A+HG +A+ F M +A V
Sbjct: 309 SALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVT 368
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PN++ +I ILSAC H GLVE GR +F+ M G++P+IE YGCM+DLLGRAG+L+EAE+
Sbjct: 369 PNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEE 428
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+R MP E + IW +LL A ++ ++++GE + L++L PH+SG+Y LSN+YA LG
Sbjct: 429 LIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGN 488
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
W ++R M+ M ++K PGCS+IE+ +HEF+ D SH + +L +++ +++
Sbjct: 489 WEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRS 548
Query: 489 AEHLQNEFSGVLESD 503
+ N L +D
Sbjct: 549 NGYRPNTLEVFLNTD 563
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 53/289 (18%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN---EAITLFRRMQVE-NVKPDEIAML 214
D++ ARA+F M E N W T++ A+ + + EA+ LF M + VKP+
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI- 244
+ L ACA+ + G+ IH I ++G N +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 245 -----------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
V L N +ID + G I A +F+ M +SV++W MI+G A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYA 246
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G EA+++F M+ + + PN +T +++L A +G +ELG ++ ++ + IE
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKIEIDD 305
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
++D+ + G + EA ++ +P + NA W +++ A ++G E
Sbjct: 306 VLGSALVDMYSKCGSIDEALQVFETLP-KRNAITWSAIIGAFAMHGRAE 353
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/485 (38%), Positives = 297/485 (61%), Gaps = 8/485 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL Q +++L++ I + + Y +F + P+ +L+ I+
Sbjct: 65 IIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLS 124
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAAL 117
+ Y +++ + P +++F + KA ++LG+++H QT+ G SD++V ++
Sbjct: 125 ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSM 184
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I +Y C + ARKVFDE+S R +V W ++ YAK GD+ +A LF+ + K++++
Sbjct: 185 IDLYVKCGFLGCARKVFDEMSER--DVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVA 242
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WT ++ GYAQ +P EA+ F++MQ ++ DE+ + +SACAQLGAV+ WI + E
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAE 302
Query: 238 Q--YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ +G + V + +ALIDMY+K G +A +VFE MK ++V ++++MI G A+HG A
Sbjct: 303 RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSA 362
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M + ++PN++TFI ILSAC H GLVE GR+ F M+ +G+ P + Y CM+D
Sbjct: 363 LQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVD 422
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EA L++ MP E N +WG+LL A I+G+ ++ + A L KLEP+ GN
Sbjct: 423 LLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGN 482
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE-VSKRVHEFVAGDTSHPDFDR 474
Y +LSNIYA GRW E K+RKV+R+ G KK PGCS+ E + +H+F AGDT+HP
Sbjct: 483 YILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSE 542
Query: 475 LYQIL 479
+ Q L
Sbjct: 543 IRQAL 547
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/495 (37%), Positives = 303/495 (61%), Gaps = 18/495 (3%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP---LNAVILYNKIQASA-LRPDNYSFPFV 82
DYA ++F +P+ + +NT ++ L +T++ A++L++ + ++P+ ++FP V
Sbjct: 69 DYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSV 128
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD------- 135
LKA + S + G++IH V G D V++ L++MY C + DA +F
Sbjct: 129 LKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 136 -----ELSLRVW--NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
EL R NV +WN M+ G ++GD+ +A+ LF+ M ++V+SW +I+GYAQ
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQN 248
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
EAI LF+ MQ N+ P+ + +++ L A A++GA+ELG+WIH Y + + L
Sbjct: 249 GHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLG 308
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
+AL+DMY+K G I KALQVFE + ++ ITW+ +I A+HG +A+ F M +A V
Sbjct: 309 SALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVT 368
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PN++ +I ILSAC H GLVE GR +F+ M G++P+IE YGCM+DLLGRAG+L+EAE+
Sbjct: 369 PNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEE 428
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+R MP E + IW +LL A ++ ++++GE + L++L PH+SG+Y LSN+YA LG
Sbjct: 429 LIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGN 488
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
W ++R M+ M ++K PGCS+IE+ +HEF+ D SH + +L +++ +++
Sbjct: 489 WEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRS 548
Query: 489 AEHLQNEFSGVLESD 503
+ N L +D
Sbjct: 549 NGYRPNTLEVFLNTD 563
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 53/289 (18%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN---EAITLFRRMQVE-NVKPDEIAML 214
D++ ARA+F M E N W T++ A+ + + EA+ LF M + VKP+
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI- 244
+ L ACA+ + G+ IH I ++G N +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 245 -----------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
V L N +ID + G I A +F+ M +SV++W MI+G A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYA 246
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G EA+++F M+ + + PN +T +++L A +G +ELG ++ ++ + +E
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKVEIDD 305
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
++D+ + G + +A ++ +P + NA W +++ A ++G E
Sbjct: 306 VLGSALVDMYSKCGSIDKALQVFETLP-KRNAITWSAIIGAFAMHGRAE 353
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 301/549 (54%), Gaps = 62/549 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I R L + ++ + I + S + A ++F P+V+LYNT I+A Q L A
Sbjct: 46 IIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKA 105
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +Q + L DN+++PF+LKA + + IHC G D+ V +LI
Sbjct: 106 FATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDS 165
Query: 121 YASCKCIY---------------------------------DARKVFDELSLR---VWN- 143
Y+ C + ARK+FDE++ R WN
Sbjct: 166 YSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNT 225
Query: 144 -------------------------VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
V W+TMV+GY K GD+ AR LF+ M KN+++W
Sbjct: 226 ILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTW 285
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T +I+G+A+ EA TL+ +M+ +KPD+ +++ L+ACA+ G + LG+ +H I++
Sbjct: 286 TIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKK 345
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ V ++NAL+DMYAK G++ KAL +F M + +++W M+ GLA+HG G +A+ +
Sbjct: 346 IRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQL 405
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
FS+M++ KP+++T IAIL AC H G V+ G YFN M+ +GI P IE YGCMIDLLG
Sbjct: 406 FSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLG 465
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G L+EA +L++ MP E N IWG+LL A ++ V L E L LI LE + GNY++
Sbjct: 466 RGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSM 525
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNI+A G WN +R M+ GV+K G S IE+ VHEF D SHP+ D++YQI
Sbjct: 526 LSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQI 585
Query: 479 LCKINGQMK 487
L K+ +K
Sbjct: 586 LVKLGQDLK 594
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/488 (38%), Positives = 299/488 (61%), Gaps = 8/488 (1%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFT--HKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
+L+ I +S G D AY +F + D+ +N+ + Q P A+ L+ +++
Sbjct: 277 VLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRN 336
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIY 128
+ P+ + V+ A K + LGR++ C + + +++V A I M+ C +
Sbjct: 337 EGVHPNAVTMVSVMSACAKTMNLTLGRKV-CDYIDRNEMMMNLNVCNATIDMFVKCGEVE 395
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
AR +FD + R +V W T++ GYAK+ + AR +F+ M K++ +W LI+GY Q
Sbjct: 396 IARGLFDNMEKR--DVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453
Query: 189 DQPNEAITLFRRMQV--ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+P EA+ +FR +Q+ +PD++ +L+ LSACAQLGA+++GEWIH YI++ +
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L +LIDMY+KSG + KA++VF ++ NK V W+ MIAGLA+HG G A+++F M+ +
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
VKPN +TF +L AC H GLV+ G+R F+ M+ YG+ PK + Y CM+D+LGRAG+L+EA
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
K + MP +A++WG+LL A I+G++EL E A L+++EP N G Y +LSN+YA
Sbjct: 634 LKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKT 693
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
G W ++R+ MRD G+KK GCS IE+ VHEF+ GD +HP +Y L +I ++
Sbjct: 694 GDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARL 753
Query: 487 KFAEHLQN 494
+ ++ N
Sbjct: 754 RSHGYVAN 761
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 207/423 (48%), Gaps = 70/423 (16%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPDNYSF 79
SS DYA +F +P++Y +N I+AL + +P+ +V+++ + + S P+ ++F
Sbjct: 184 SSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTF 243
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
P ++KAV + +G+ +H + T DV V+ +LI YASC + A VF+ +
Sbjct: 244 PVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEG 303
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
++ WN+MV G+ + GY P++A+ LF
Sbjct: 304 NNKDIVSWNSMVTGFVQ--------------------------GGY-----PDKALDLFE 332
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
RM+ E V P+ + M++ +SACA+ + LG + +YI++ + + + NA IDM+ K G
Sbjct: 333 RMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCG 392
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLAL---HGLGREALDMFSR--------------- 301
++ A +F+NM+ + V++WTT+I G A HG+ R+ D R
Sbjct: 393 EVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQ 452
Query: 302 ---------------MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
+ ++ +P+++T ++ LSAC +G +++G +K + I+
Sbjct: 453 SGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIK-KERIQLN 511
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
+ID+ ++G +++A ++ + + +W +++A ++G GE A++ +
Sbjct: 512 RNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGR---GEAAIELFL 567
Query: 407 KLE 409
++
Sbjct: 568 DMQ 570
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/478 (38%), Positives = 293/478 (61%), Gaps = 15/478 (3%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP---LNAVILYNKIQASALRPDNYSFPFVL 83
DYA+ IF + + + +NT I+ ++D + + Y + + P+ ++FP VL
Sbjct: 76 DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF--------- 134
KA K I+ G++IH + G D V++ L++MY C + DAR +F
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 135 ---DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
+ R + +WN M+ GY ++GD AR LF+ M +++V+SW T+I+GY+
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+A+ +FR M+ +++P+ + +++ L A ++LG++ELGEW+H Y E G+ L +AL
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMY+K G I KA+ VFE + ++VITW+ MI G A+HG +A+D F +M +A V+P++
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+ +I +L+AC H GLVE GRRYF+ M S G+EP+IE YGCM+DLLGR+G L EAE+ +
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP + + IW +LL A + G+VE+G+ L+ + PH+SG Y LSN+YA G W+E
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++R M++ ++K PGCS I++ +HEFV D SHP + +L +I+ +++ A
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 50/283 (17%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE--AITLFRRMQV-ENVKPDEIAMLA 215
DL+ A +F M ++N SW T+I G+++ D+ AITLF M E V+P+ +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI-- 244
L ACA+ G ++ G+ IH +YG N I
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 245 --------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+ L N +ID Y + G A +F+ M+ +SV++W TMI+G +L+G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
++A+++F M++ ++PN +T +++L A +G +ELG + ++ GI
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLG 312
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G +++A + R+P E N W +++ I+G
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHG 354
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/477 (37%), Positives = 294/477 (61%), Gaps = 3/477 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G Q+ ++ + SCS DYA IF + P+VYLY I + N L A
Sbjct: 72 LIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEA 131
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY+++ ++ PDNY +LKA + GRE+H + + G S+ V ++++
Sbjct: 132 IQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMEL 191
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + DAR+VF+E+ +V M++ Y+ G + A A+F + K+ + WT
Sbjct: 192 YGKCGELGDARRVFEEMP---EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTA 248
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I G+ + ++ N A+ FR MQ ENV+P+E ++ LSAC+QLGA+E+G W+H+Y+ ++
Sbjct: 249 MIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + + NALI+MY++ G I +A VF+ MK++ VIT+ TMI+GL+++G R+A+++F
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M R++P +TF+ +L+AC H GLV+ G F+ M Y +EP+IE YGCM+DLLGR
Sbjct: 369 VMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRV 428
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L+EA L+R M + + G+LL+A ++ ++ELGE + L +SG Y +LS
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLS 488
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
++YA G+W E+ ++R M++ G++K PGCS IEV+ +HEF+ GD HP +R+Y+
Sbjct: 489 HVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYE 545
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 138/339 (40%), Gaps = 73/339 (21%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGRE---------IHCQTVGTGLDSDVHVVAALIQMYASC 124
P++ S P LK++ + I L + IH Q + G D +V L++ + C
Sbjct: 35 PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 94
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I + A +F+ NV +T LI G
Sbjct: 95 HAI---------------------------------DYASRIFQYTHNPNVYLYTALIDG 121
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+ EAI L+ RM E++ PD M + L AC A+ G +H+ + G ++
Sbjct: 122 FVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSN 181
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENM------------------------------KNK 274
+ ++++Y K G++G A +VFE M + K
Sbjct: 182 RLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRK 241
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+ WT MI G + AL+ F M+ V+PNE T + +LSAC +G +E+GR
Sbjct: 242 DTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 301
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ M+ ++ IE + +I++ R G + EA+ + M
Sbjct: 302 SYMR-KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/485 (38%), Positives = 297/485 (61%), Gaps = 8/485 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL Q +++L++ I + + Y +F + P+ +L+ I+
Sbjct: 65 IIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLS 124
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAAL 117
+ Y +++ + P +++F + KA ++LG+++H QT+ G SD++V ++
Sbjct: 125 ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSM 184
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I +Y C + ARKVFDE+S R +V W ++ YAK GD+ +A LF+ + K++++
Sbjct: 185 IDLYVKCGFLGCARKVFDEMSER--DVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVA 242
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WT ++ GYAQ +P EA+ F++MQ ++ DE+ + +SACAQLGAV+ WI + E
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAE 302
Query: 238 Q--YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ +G + V + +ALIDMY+K G +A +VFE MK ++V ++++MI G A+HG A
Sbjct: 303 RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSA 362
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M + ++PN++TFI ILSAC H GLVE GR+ F M+ +G+ P + Y CM+D
Sbjct: 363 LQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVD 422
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EA L++ MP E N +WG+LL A I+G+ ++ + A L KLEP+ GN
Sbjct: 423 LLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGN 482
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE-VSKRVHEFVAGDTSHPDFDR 474
Y +LSNIYA GRW E K+RKV+R+ G KK PGCS+ E + +H+F AGDT+HP
Sbjct: 483 YILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSE 542
Query: 475 LYQIL 479
+ Q L
Sbjct: 543 IRQAL 547
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/491 (38%), Positives = 295/491 (60%), Gaps = 37/491 (7%)
Query: 8 QNNH-LLSRFIDSCSS---LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
QNN +L++ I+ C+S + D+A+ +F +PD+ L+NT + + D+PL A++L
Sbjct: 63 QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILL 122
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+++ S L PD+Y+F +LKA +L +E G+++HC V G+ +++V LI MY +
Sbjct: 123 CSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTA 182
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + AR+VFD K+G E V+++ +I
Sbjct: 183 CNDVDAARRVFD--------------------KIG-------------EPCVVAYNAIIT 209
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
A+ +PNEA+ LFR +Q +KP ++ ML ALS+CA LGA++LG WIH Y+++ G +
Sbjct: 210 SCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQ 269
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V +N ALIDMYAK G + A+ VF++M + W+ MI A HG G +A+ M M+
Sbjct: 270 YVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMK 329
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+A+V+P+EITF+ IL AC H GLVE G YF+ M YGI P I+ YGCMIDLLGRAG L
Sbjct: 330 KAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRL 389
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA K + +P + +W +LL++ + +G+VE+ + +Q + +L+ + G+Y ILSN+
Sbjct: 390 EEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLC 449
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A GRW++ +RK+M D G K+PGCS IEV+ VHEF +GD H L+ L ++
Sbjct: 450 ARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELV 509
Query: 484 GQMKFAEHLQN 494
++K A ++ +
Sbjct: 510 KELKLAGYVPD 520
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N ++ I+ ++ D A +F +P V YN I + + P A+ L+
Sbjct: 165 GVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALF 224
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q S L+P + + L + L ++LGR IH G D V V ALI MYA C
Sbjct: 225 RELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKC 284
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA VF ++ R + W+ M+ YA G
Sbjct: 285 GSLDDAVSVFKDMPRR--DTQAWSAMIVAYATHG-------------------------- 316
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
++AI++ R M+ V+PDEI L L AC+ G VE G E+ H+ +YG+
Sbjct: 317 -----HGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVP 371
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSV-ITWTTMIAGLALHG 290
+ +ID+ ++G++ +A + + + K I W T+++ + HG
Sbjct: 372 SIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHG 419
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/470 (38%), Positives = 295/470 (62%), Gaps = 36/470 (7%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q++ L+++ +D C+ G ++YA +F + P+ +LYN I+A + A+ +Y
Sbjct: 87 LSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYK 146
Query: 66 KIQASA-----LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ + + PD ++FPFV+K+ L +LG+++H G S+ V +L++M
Sbjct: 147 QMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEM 206
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + DA +VF+E++ R + W +V+GYA++G
Sbjct: 207 YVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIG---------------------- 244
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
YA +A+ FRRMQ+ ++PDEI++++ L CAQLGA+ELG+WIH Y ++ G
Sbjct: 245 ---CYA------DALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAG 295
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + NALI+MYAK G I + ++F+ MK + VI+W+TMI GLA HG REA+++F
Sbjct: 296 FLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQ 355
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M++A+++P+ ITF+ +L+AC H GL+ G RYF MK Y IEP +E YGC+++LLG +
Sbjct: 356 EMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLS 415
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L +A +L+++MP + ++ IWGSLL++ +G++++ A++HL++LEP ++GNY +LS
Sbjct: 416 GRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLS 475
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
N+YA LG+W+ ++RK+MR +KK PGCS IEV V EF +GD S P
Sbjct: 476 NLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKP 525
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/493 (38%), Positives = 303/493 (61%), Gaps = 8/493 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD L+ + + L YA ++F KP VYLYN I+ +P +LY
Sbjct: 15 GLDHTKFLIEKLLQ----LPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLY 70
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + P+ YSF F+ A L + G+ +H +G SD+ + AL+ MYA
Sbjct: 71 CQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKL 130
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR++FDE+ +R ++ WN+++AGYA+ G + A LF M +NVISWT LI+G
Sbjct: 131 GMLRSARQLFDEMPVR--DIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISG 188
Query: 185 YAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
YAQ + +A+ +F ++ E KP+E+++ + L AC+QLGA+++G+ I Y G
Sbjct: 189 YAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFK 248
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRM 302
++NA+++++A+ G I +A QVF+ + +K ++ +W TMI GLA+HG +AL ++ +M
Sbjct: 249 NAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQM 308
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+++P+++TF+ +L AC H G+V GR+ F M+S++ + PK+E YGC++DLLGRAG
Sbjct: 309 LIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGE 368
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA L++ MP ++ IWG+LL A + +G+VELGE A + L KLEP N GNY ILSNI
Sbjct: 369 LQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNI 428
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA+ G W+ ++RK+M+ + K G SYIEV +HEF+ D SH +Y +L KI
Sbjct: 429 YALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVEDRSHLKSGEIYALLHKI 488
Query: 483 NGQMKFAEHLQNE 495
+K +H+ ++
Sbjct: 489 YDIIKLHKHVHHD 501
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 144/303 (47%), Gaps = 16/303 (5%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
++IH ++ GLD ++ L+Q+ + A +FD++ +V ++N + ++
Sbjct: 5 KQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKP--SVYLYNKFIQTFS 58
Query: 156 KVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
+G + L+ M + N S+T L A + L D
Sbjct: 59 SIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMF 118
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
AM A L A+LG + + + + +P N+LI YA+SG + AL++F M
Sbjct: 119 AMTALLDMYAKLGMLRSARQLFDEMPVRD----IPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELG 330
++VI+WT +I+G A +G +AL+MF +E + KPNE++ ++L AC +G +++G
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIG 234
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+R ++ G +++L R G ++EA+++ + + N W +++
Sbjct: 235 KRIEAYARNN-GFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLA 293
Query: 391 IYG 393
++G
Sbjct: 294 VHG 296
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 23/242 (9%)
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I Y L + LI+ + + A +F+ + SV + I + G
Sbjct: 7 IHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRC 66
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 354
++ +M PN+ +F + AC + V G+ + + KS G + ++
Sbjct: 67 WLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS--GFASDMFAMTALL 124
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
D+ + G L+ A +L MP + W SL+A G + E AL+ K+ N
Sbjct: 125 DMYAKLGMLRSARQLFDEMPVR-DIPTWNSLIAGYARSGHM---EAALELFNKMPVRNVI 180
Query: 415 NYAILSNIYAILGRW-----------NESGKIRKVMRDMGVKKMPGCSY---IEVSKRVH 460
++ L + YA G++ NE G + V +P CS +++ KR+
Sbjct: 181 SWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASV--LPACSQLGALDIGKRIE 238
Query: 461 EF 462
+
Sbjct: 239 AY 240
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 313/560 (55%), Gaps = 76/560 (13%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL +N+LL+ + S FSD Y+ +F +P+++L+NT I+ L D +A+
Sbjct: 41 GLCHDNYLLNMILRC--SFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
Y +++ P+N++FPFVLKA +L ++LG +IH V G D DV V +L+ +YA
Sbjct: 99 FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYA 158
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGY---------------------------- 154
C + DA KVFD++ + NV W +++GY
Sbjct: 159 KCGYLEDAHKVFDDIPDK--NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTI 216
Query: 155 -------AKVGDLNNA----RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR---- 199
++GDLN+ + + E+ +NV T+L+ YA+ +A ++F
Sbjct: 217 VRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 276
Query: 200 ---------------------------RMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
+MQ ENVKPD ++ LSACA+LGA+ELGEW+
Sbjct: 277 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWV 336
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
+++ L ALID+YAK G + +A +VF+ MK K + W +I+GLA++G
Sbjct: 337 SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYV 396
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
+ + +F ++E+ +KP+ TFI +L C H GLV+ GRRYFN M + + P IE YGC
Sbjct: 397 KISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGC 456
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLLGRAG L EA +L+R MP EANA +WG+LL A I+ D +L E AL+ LI+LEP N
Sbjct: 457 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWN 516
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
SGNY +LSNIY+ +W+E+ K+R M + ++K PGCS+IEV VHEF+ GD HP
Sbjct: 517 SGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLS 576
Query: 473 DRLYQILCKINGQMKFAEHL 492
+++Y L ++ +MK A ++
Sbjct: 577 EKIYAKLDELTKKMKVAGYV 596
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/537 (36%), Positives = 296/537 (55%), Gaps = 74/537 (13%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDN-PLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA S+ P++ LYN I+ L ++N + +++Y ++ + + PDNY+ PFVLKA
Sbjct: 76 YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKAC 135
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ + G E+H Q + GL SDV+V L++MYA C I ARKVFD R ++
Sbjct: 136 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR--DLVS 193
Query: 147 WNTMVAGY-----------------------------------AKVGDLNNARALFELMT 171
W TM+ GY A++GDL R L +
Sbjct: 194 WTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYII 253
Query: 172 EK-----NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--------------------- 205
+V L+ Y + N A +F+ M V+N
Sbjct: 254 RNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 313
Query: 206 ----------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
VKPD++ ++A L++CA LG +ELG+W+H Y+++ + + NAL+DMY
Sbjct: 314 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMY 373
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G I +A VF+ M K V ++T MI GLA+HG G +ALD+FS M + ++P+E+TF+
Sbjct: 374 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 433
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L+AC HVGLVE GR+YF M + Y + P++E YGCM+DLLGRAG + EAE+ +R MP
Sbjct: 434 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPI 493
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
E +A + G+LL A I+G VELGE ++ + K+EP G Y ++SNIY+ RW ++ K+
Sbjct: 494 EPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKL 553
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
RK M++ ++K PGCS IE+ +HEF GD SHP +Y++L +I +K E L
Sbjct: 554 RKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKNNECL 610
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 72/360 (20%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D G +++A +F +V +N+ I L Q ++ ++ K+Q ++PD
Sbjct: 268 LVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 327
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ + VL + L +ELG+ +H + +D + AL+ MYA C
Sbjct: 328 DVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKC----------- 376
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
G ++ A +F+ M K+V S+T +I G A Q +A+
Sbjct: 377 ----------------------GSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKAL 414
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDM 254
LF M ++PDE+ + L+AC+ +G VE G ++ + Y L + ++D+
Sbjct: 415 DLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDL 474
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
++G I +A + NM ++P+
Sbjct: 475 LGRAGLINEAEEFIRNMP----------------------------------IEPDAFVL 500
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE-QYGCMIDLLGRAGYLQEAEKLLRRM 373
A+L AC G VELG ++MK IEP+ + Y M ++ A ++A KL + M
Sbjct: 501 GALLGACKIHGKVELGE---SVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVKPDEIAMLAAL 217
D A +L + N+ + +I G A + + E + ++++M + + PD + L
Sbjct: 73 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 132
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
ACA+ AV GE +H + GL + V ++N L+ MYA I A +VF+ + ++
Sbjct: 133 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLV 192
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+WTTMI G G RE + +F M ++ + +T + +LS+C +G + LGR+ +
Sbjct: 193 SWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYI 252
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + ++D+ + G A K+ + MP + N W S+++
Sbjct: 253 IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVK-NVVSWNSMISG 302
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 286/469 (60%), Gaps = 3/469 (0%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F S DV +N I Q + + + LY +++ S PD VL A
Sbjct: 173 LFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGN 232
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ G+ IH G H+ +L+ MYA+C ++ AR+V+D+L + ++ V M+
Sbjct: 233 LSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSK--HMVVSTAML 290
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
+GYAK+G + +AR +F+ M EK+++ W+ +I+GYA+ QP EA+ LF MQ + PD+I
Sbjct: 291 SGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQI 350
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
ML+ +SACA +GA+ +WIH Y ++ G +P+NNALIDMYAK G + KA +VFENM
Sbjct: 351 TMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENM 410
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K+VI+W++MI A+HG A+ +F RM+ ++PN +TFI +L AC H GLVE G+
Sbjct: 411 PRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQ 470
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
++F+ M + + I P+ E YGCM+DL RA +L++A +L+ MPF N IWGSL++A
Sbjct: 471 KFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQN 530
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+G++ELGE A L++LEP + G +LSNIYA RW++ G +RK+M+ GV K CS
Sbjct: 531 HGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACS 590
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 500
IEV+ VH F+ D H D +Y+ L + Q+K + + SG+L
Sbjct: 591 RIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPST-SGIL 638
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 193/419 (46%), Gaps = 71/419 (16%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DYA S+F+H P N ++ + P N + LY ++ + D +SFP +LKAV
Sbjct: 66 DYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAV 125
Query: 87 VKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
KLS + LG EIH G +D + +ALI MYA+C I DAR +FD++S R +V
Sbjct: 126 SKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHR--DVV 183
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WN M+ GY++ ++ L+E M+
Sbjct: 184 TWNIMIDGYSQNAHYDHVLKLYE-------------------------------EMKTSG 212
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+PD I + LSACA G + G+ IH +I+ G + +L++MYA G + A
Sbjct: 213 TEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAR 272
Query: 266 QV-------------------------------FENMKNKSVITWTTMIAGLALHGLGRE 294
+V F+ M K ++ W+ MI+G A E
Sbjct: 273 EVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLE 332
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
AL +F+ M+R R+ P++IT ++++SAC +VG + + ++ + + G + +I
Sbjct: 333 ALQLFNEMQRRRIVPDQITMLSVISACANVGAL-VQAKWIHTYADKNGFGRTLPINNALI 391
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK---LEP 410
D+ + G L +A ++ MP N W S++ A ++GD + AL H +K +EP
Sbjct: 392 DMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGDAD-SAIALFHRMKEQNIEP 448
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 297/481 (61%), Gaps = 4/481 (0%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
S G D A +FT + DV +N+ I Q +P A+ L+ K+++ ++ + +
Sbjct: 180 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 239
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL A K+ +E GR + ++ ++ + A++ MY C I DA+++FD + +
Sbjct: 240 VLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK- 298
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ W TM+ GYA D AR + M +K++++W LI+ Y Q +PNEA+ +F +
Sbjct: 299 -DNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHEL 357
Query: 202 QVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
Q++ N+K ++I +++ LSACAQ+GA+ELG WIH+YI++ G+ + +ALI MY+K G
Sbjct: 358 QLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGD 417
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ KA +VF +++ + V W+ MI GLA+HG G EA+DMF +M+ A VKPN +TF + A
Sbjct: 418 LEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCA 477
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H GLV+ F M+S YGI P+ + Y C++D+LGR+GYL++A K + MP + +
Sbjct: 478 CSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 537
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+WG+LL A I+ ++ L E A L++LEP N G + +LSNIYA G+W+ ++RK MR
Sbjct: 538 VWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMR 597
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 500
G+KK PGCS IE+ +HEF++GD +HP +++Y L ++ ++K + + E S VL
Sbjct: 598 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK-SNGYEPEMSHVL 656
Query: 501 E 501
+
Sbjct: 657 Q 657
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 229/460 (49%), Gaps = 75/460 (16%)
Query: 1 MIVRGLDQNNHLLSRF--IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI G+ + + S+ I + SS +YA +F +P+ + +NT I+A +P+
Sbjct: 54 MIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPV 113
Query: 59 NAVILYNKIQASALR--PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
++ + + +S + P+ Y+FPF++KA ++S++ LG+ +H + + + SDV V +
Sbjct: 114 CSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANS 173
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI Y SC GDL++A +F + EK+V+
Sbjct: 174 LIHCYFSC---------------------------------GDLDSACKVFTTIKEKDVV 200
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SW ++I G+ Q P++A+ LF++M+ E+VK + M+ LSACA++ +E G + +YI
Sbjct: 201 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYI 260
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL-------- 288
E+ +N + L NA++DMY K G I A ++F+ M+ K +TWTTM+ G A+
Sbjct: 261 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 320
Query: 289 -----------------------HGLGREALDMFSRME-RARVKPNEITFIAILSACCHV 324
+G EAL +F ++ + +K N+IT ++ LSAC V
Sbjct: 321 EVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQV 380
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G +ELGR + +K + GI+ +I + + G L++A ++ + + + +W +
Sbjct: 381 GALELGRWIHSYIK-KNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSA 438
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHN-SGNYAILSNIY 423
++ ++G G A+ K++ N N +N++
Sbjct: 439 MIGGLAMHG---CGSEAVDMFYKMQEANVKPNGVTFTNVF 475
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 157/361 (43%), Gaps = 37/361 (10%)
Query: 50 ALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDS 109
A+ T PL+ N + +N + + + S++ ++ H + TG+ S
Sbjct: 2 AIFSTAQPLSLPRHPNFSNPNQPTTNNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFS 61
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFEL 169
D Y A K+F +A + L AR +F+
Sbjct: 62 DP----------------YSASKLF---------------AIAALSSFASLEYARKVFDE 90
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK--PDEIAMLAALSACAQLGAVE 227
+ + N +W TLI YA P +I F M + P++ + A A++ ++
Sbjct: 91 IPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLS 150
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
LG+ +H + + + V + N+LI Y G + A +VF +K K V++W +MI G
Sbjct: 151 LGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 210
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPK 346
G +AL++F +ME VK + +T + +LSAC + +E GRR + I ++R +
Sbjct: 211 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNV--N 268
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
+ M+D+ + G +++A++L M E + W ++L I D E L +
Sbjct: 269 LTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNAMP 327
Query: 407 K 407
K
Sbjct: 328 K 328
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 302/518 (58%), Gaps = 31/518 (5%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I+ G ++ + ++ ++S + S DYA+ +F + PD Y + T I+ + NP
Sbjct: 50 LIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEK 109
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ Y ++ + + ++F FVLKA + + GR +H + V G DV ALI
Sbjct: 110 ALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIH 169
Query: 120 MYASCKCIYDARKVFDEL---SLRVWN--------------------------VAVWNTM 150
MY C I DA +FDE+ ++ WN V WN +
Sbjct: 170 MYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAV 229
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V GY+K+G ++ AR+LF+LM E++V+SW ++I+ Y Q + EA+ LF+ M + V D
Sbjct: 230 VGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADS 289
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
I + + LSACAQ+GA+++G WIH Y+++ L V L+ AL+DMYAK G I A VF
Sbjct: 290 IIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNT 349
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M K++ +W M++GLA+HG G AL++F +ME V PN+ITF+A+LSAC H+G VE G
Sbjct: 350 MPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEG 409
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ FN M + I PK+E YGCM+D+L R G + EA++++R MP E N IWG+LL A
Sbjct: 410 WKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACK 469
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV-KKMPG 449
++G +GE + ++ KL + G Y +LSNI+A +WNE K RK+M+ MGV KK+PG
Sbjct: 470 VHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPG 529
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
S IE+ VH+F A D H + + ++ ++N ++
Sbjct: 530 YSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLE 567
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/432 (42%), Positives = 285/432 (65%), Gaps = 14/432 (3%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY-NKIQASALRPDNYSFPFVLKA 85
DYA IF +P+ + YNT I+AL ++++P +A++++ ++ ++ P+ ++FP V KA
Sbjct: 39 DYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKA 98
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF----------- 134
+ + GR++H V GLDSD VV+ +++MY SC + DA ++F
Sbjct: 99 CGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDG 158
Query: 135 --DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
D+ +V +WN M+ GY ++G+L AR LF+ M +++V+SW +IAGYAQ
Sbjct: 159 IRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFK 218
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ +FR MQ+ V P+ + +++ L A ++LGA+ELG+W+H Y + + L +ALI
Sbjct: 219 EAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALI 278
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G I KALQVFE + ++V+TW+T+IAGLA+HG ++ LD F MERA V P+++
Sbjct: 279 DMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDV 338
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T+I +LSAC H GLV GR +F+ M G+EP+IE YGCM+DLLGRAG L+E+E+L+
Sbjct: 339 TYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILN 398
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP + + IW +LL A ++G+VE+G+ +HL++L PH+SG+Y LSNIYA LG W
Sbjct: 399 MPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGV 458
Query: 433 GKIRKVMRDMGV 444
K+R +M++M V
Sbjct: 459 AKVRLMMKEMDV 470
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 51/283 (18%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAA 216
DL+ AR +F M N S+ TLI ++ + P +A+ +F M VE+ V+P+ +
Sbjct: 37 DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEM-VEDCSVEPNCFTFPSV 95
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNT--------------------------------- 243
AC + + G +H ++GL++
Sbjct: 96 FKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDG 155
Query: 244 -------------IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
V L N +ID Y + G++ A +F+ M +SV++W MIAG A G
Sbjct: 156 CDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSG 215
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
+EA+++F M+ A V PN +T +++L A +G +ELG ++ ++ R I
Sbjct: 216 HFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELG-KWVHLYAVRNNIGVDDVLG 274
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G +++A ++ +P + N W +++A ++G
Sbjct: 275 SALIDMYAKCGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHG 316
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
R +D + L + ID +G + A ++F + V +N I Q+ + AV +
Sbjct: 164 RRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEV 223
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ ++Q + + P+ + VL A+ +L +ELG+ +H V + D + +ALI MYA
Sbjct: 224 FREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAK 283
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C I A +VF+ L R NV W+T++AG A G
Sbjct: 284 CGSIEKALQVFEGLPKR--NVVTWSTIIAGLAMHG------------------------- 316
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLN 242
+ + + F M+ V P ++ + LSAC+ G V G W ++ + GL
Sbjct: 317 ------RAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLE 370
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
+ ++D+ ++G + ++ ++ NM K + W ++ +HG
Sbjct: 371 PRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHG 419
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/485 (40%), Positives = 306/485 (63%), Gaps = 10/485 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTD-------NPLNAVILYNKIQASAL-RPDNYSF 79
YA F+ P+ + +NT I+AL +D N L A++ ++ + L P+ ++F
Sbjct: 67 YARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTF 126
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
P VLKA KL+ IE G+++H V GL SD V + L+++Y C + DA +F + L
Sbjct: 127 PCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRL 186
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
NV +WN M+ GY ++GDL +R LF+ M K+V+SW +I+G AQ EAI +F
Sbjct: 187 E-GNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFH 245
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
MQ+ +V P+ + +++ L A ++LGA+ELG+W+H + E+ + L +ALIDMY+K G
Sbjct: 246 DMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCG 305
Query: 260 KIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
I KA+QVFE ++NK + ITW+ +I GLA+HG R+ALD F RM++A V P+++ +I +L
Sbjct: 306 SIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVL 365
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
SAC H GLVE GR + M + G+ P+IE YGCM+DLLGRAG L+EAE+L+ MP + +
Sbjct: 366 SACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPD 425
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
I +LL A ++G++E+GE + L+ PH+SG+Y LSN++A G W K+R
Sbjct: 426 DVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLK 485
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSG 498
M+++ ++K PGCS+IE+ +HEF+ D SHP + ++ +L +++ +++ + N
Sbjct: 486 MKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQV 545
Query: 499 VLESD 503
+L D
Sbjct: 546 LLNMD 550
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 44/291 (15%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-------EAITLFRRMQVEN-VKPDE 210
++ AR F + N SW T+I A D + EA+ F M + V+P++
Sbjct: 64 EIKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNK 123
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGL--------NTI------------------ 244
L ACA+L +E G+ +H ++ + GL N +
Sbjct: 124 FTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQ 183
Query: 245 ------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
V L N +ID Y + G + + ++F++M NKSV++W MI+G A +G +EA++M
Sbjct: 184 TRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEM 243
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M+ V PN +T +++L A +G +ELG ++ ++ + IE +ID+
Sbjct: 244 FHDMQLGDVPPNYVTLVSVLPAVSRLGAIELG-KWVHLFAEKNEIEIDDVLGSALIDMYS 302
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ G + +A ++ + + N W +++ ++G AL H +++
Sbjct: 303 KCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGR---ARDALDHFWRMQ 350
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/488 (39%), Positives = 291/488 (59%), Gaps = 13/488 (2%)
Query: 11 HLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP-----LNAVIL 63
+L++R + CS G YA ++F PD+ YN I+A ++ A++L
Sbjct: 54 YLITRLLYVCSFSYYGSFSYATNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALML 113
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
Y ++ + P+ +FPF+LK + G+ IH Q + G DV+V +LI +Y +
Sbjct: 114 YKQMFCKDIVPNCLTFPFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMA 173
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
+ +ARKVFDE+ V +V WN+MV G + G L+ A LF M +N+I+W ++I
Sbjct: 174 GGLLSNARKVFDEM--LVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIIT 231
Query: 184 GYAQMDQPNEAITLFRRMQV---ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
G AQ E++ LF MQ+ + VKPD+I + + LSACAQLGA++ G+W+H Y+ + G
Sbjct: 232 GLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNG 291
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V + AL++MY K G + KA ++FE M K WT MI+ ALHGLG +A + F
Sbjct: 292 IECDVVIGTALVNMYGKCGDVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFL 351
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
ME+A VKPN +TF+ +LSAC H GLVE GR F++MK Y IEP++ Y CM+D+L RA
Sbjct: 352 EMEKAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRA 411
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
E+E L+R MP + + +WG+LL ++G+VELGE + HLI LEPHN Y
Sbjct: 412 RLFDESEILIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWC 471
Query: 421 NIYAILGRWNESGKIRKVMRDMGV-KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+IYA G ++ + +IR +M++ + KK+PGCS IE++ V EF AG +S L +L
Sbjct: 472 DIYAKAGMFDAAKRIRNIMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELPMKELVLVL 531
Query: 480 CKINGQMK 487
++ +MK
Sbjct: 532 NGLSNEMK 539
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/496 (37%), Positives = 293/496 (59%), Gaps = 35/496 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL--GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ L Q+ L S+ I+S + G YA+ IF+ P+++++NT I+ +D+P+
Sbjct: 30 MVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPI 89
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ LY + + P++Y+F FVLKA KL + G+E+H Q V GLD + +V LI
Sbjct: 90 TAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLI 149
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
++YA+C C ++ A +F+ M E + SW
Sbjct: 150 KLYAACGC---------------------------------MDYACVMFDEMPEPDSASW 176
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+T+++GYAQ Q EA+ LFR MQ ENV D + + + C LGA++LG+W+H+Y+++
Sbjct: 177 STMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDK 236
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ V L AL+ MY+K G + AL+VF+ M + V W+TMIAG A+HG G +AL +
Sbjct: 237 EGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQL 296
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M+R++ PN +TF ++LSAC H GLVE G + F M + Y I P+I+ YGCM+DL
Sbjct: 297 FDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFC 356
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG + A K ++ MP E N +W +LL A +G +LGE + ++KL+P + NY +
Sbjct: 357 RAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVL 416
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
+SN+YA LGRW+ ++R +M+D KK G S IE++ VH+F+ GD SHP+ +++Y +
Sbjct: 417 VSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGM 476
Query: 479 LCKINGQMKFAEHLQN 494
L ++ ++K H+ +
Sbjct: 477 LHQMARKLKQVGHVNS 492
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/466 (40%), Positives = 289/466 (62%), Gaps = 14/466 (3%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F + D+ ++ I Q A++++ ++ A+ +R D VL A
Sbjct: 257 AWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAH 316
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF------DELSLRVW 142
LS ++ G+ IH + G++S V++ ALI MY+ I DA+K+F D++S
Sbjct: 317 LSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQIS---- 372
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
WN+M++G K G + ARALF++M EK+++SW+ +I+GYAQ D +E + LF MQ
Sbjct: 373 ----WNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQ 428
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ ++PDE +++ +SAC L A++ G+W+H YI + GL V L L+DMY K G +
Sbjct: 429 LGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVE 488
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
AL+VF M+ K V +W +I GLA++GL +LDMFS M+ V PNEITF+ +L AC
Sbjct: 489 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACR 548
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H+GLV+ GR +F M ++GIEP ++ YGCM+DLLGRAG L EAEKL+ MP + A W
Sbjct: 549 HMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATW 608
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL A +GD E+GE + LI+L+P + G + +LSNI+A G W + ++R +M+
Sbjct: 609 GALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQ 668
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
GV K PGCS IE + VHEF+AGD +HP +++ +L ++ ++K
Sbjct: 669 GVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKM 714
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 228/461 (49%), Gaps = 70/461 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI+ G + SR + + F DY+ IF + +++NT ++A Q+++
Sbjct: 64 MILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAE 123
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAAL 117
A++LY + + + PDNY++P V++A + +E G +EIH + G DSDV+V L
Sbjct: 124 KALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTL 182
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV-- 175
I MYA C + DARK+FDE V + WN+++AGY K GD+ A+ +F+ M ++N+
Sbjct: 183 INMYAVCGNMRDARKLFDESP--VLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVA 240
Query: 176 -----------------------------ISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
+SW+ LI+GY Q EA+ +F M +
Sbjct: 241 SNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM 300
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI----- 261
+ DE+ +++ LSACA L V+ G+ IH + + G+ + V L NALI MY+ SG+I
Sbjct: 301 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQK 360
Query: 262 --------------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
KA +F+ M K +++W+ +I+G A H E
Sbjct: 361 LFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSET 420
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M+ +++P+E ++++SAC H+ ++ G ++ + + G++ + ++D
Sbjct: 421 LALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWVHAYIRKNGLKVNVILGTTLLD 479
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ + G ++ A ++ M E + W +L+ + G VE
Sbjct: 480 MYMKCGCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVE 519
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 41/308 (13%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I C G + A ++F + D+ ++ I Q D + L++++Q +RPD
Sbjct: 376 MISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPD 435
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
V+ A L+ ++ G+ +H GL +V + L+ MY C C+ +A +VF+
Sbjct: 436 ETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFN 495
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ + V+ WN ++ G A G + E+ ++
Sbjct: 496 GMEEK--GVSSWNALIIGLAVNG-----------LVER--------------------SL 522
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDM 254
+F M+ V P+EI + L AC +G V+ G + IE++G+ V ++D+
Sbjct: 523 DMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDL 582
Query: 255 YAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNE 311
++G + +A ++ E+M V TW ++ HG +M R+ R ++P+
Sbjct: 583 LGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG----DTEMGERVGRKLIELQPDH 638
Query: 312 ITFIAILS 319
F +LS
Sbjct: 639 DGFHVLLS 646
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
+LQ+F+ ++N + W TM+ +AL ++ M + V P+ T+ ++ AC
Sbjct: 94 SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA- 152
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
V L+E G + + + G + + +I++ G +++A KL P ++ W
Sbjct: 153 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPV-LDSVSWN 211
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
S+LA GDVE + + P N +++ +LG+ + + K+ +M
Sbjct: 212 SILAGYVKKGDVEEAKLIFDQM----PQR--NIVASNSMIVLLGKMGQVMEAWKLFNEMD 265
Query: 444 VKKM 447
K M
Sbjct: 266 EKDM 269
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 296/500 (59%), Gaps = 35/500 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
I G+D +++ + I C+ + SD YA + +PD +++NT ++ ++D P
Sbjct: 20 FIKYGVDTDSYFTGKLILHCA-ISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEP 78
Query: 58 LNAVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
N+V ++ ++ + PD++SF FV+KAV ++ G ++HCQ + GL+S + V
Sbjct: 79 HNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTT 138
Query: 117 LIQMYASCKCIYDARKVFDEL---SLRVWNVAV--------------------------W 147
LI MY C C+ ARKVFDE+ +L WN + W
Sbjct: 139 LIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSW 198
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+AGY K G+L +A+ +F M ++ +SW+T+I G A NE+ FR +Q +
Sbjct: 199 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 258
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+E+++ LSAC+Q G+ E G+ +H ++E+ G + IV +NNALIDMY++ G + A V
Sbjct: 259 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 318
Query: 268 FENMKNKS-VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
FE M+ K +++WT+MIAGLA+HG G EA+ +F+ M V P+ I+FI++L AC H GL
Sbjct: 319 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 378
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+E G YF+ MK Y IEP+IE YGCM+DL GR+G LQ+A + +MP A +W +LL
Sbjct: 379 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 438
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A + +G++EL E Q L +L+P+NSG+ +LSN YA G+W + IRK M +KK
Sbjct: 439 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 498
Query: 447 MPGCSYIEVSKRVHEFVAGD 466
S +EV K +++F AG+
Sbjct: 499 TTAWSLVEVGKTMYKFTAGE 518
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/455 (39%), Positives = 292/455 (64%), Gaps = 5/455 (1%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY-NKIQASALRPDNYSFPFVLKA 85
+YAY +FT P+++ +NT I+ Q+ P +A+ L+ + + S+++P ++P V KA
Sbjct: 75 NYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKA 134
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV-WNV 144
+L G ++H + + GL D + +I MYA+C + + K F E R+ +++
Sbjct: 135 YAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYE---RMDFDI 191
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
WN+M+ G AK G+++ +R LF+ M +N +SW ++I+GY + + EA+ LF +MQ E
Sbjct: 192 VAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEE 251
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+KP E M++ L+A A+LGA++ GEWIH+YI + V + ++IDMY K G IG+A
Sbjct: 252 RIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEA 311
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
QVFE K + +W TMI GLA++G EA+ +FSR+E + ++P+++TF+ +L+AC +
Sbjct: 312 FQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYS 371
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV+ + YF++M Y IEP I+ Y CM+D LGRAG L+EAE+L+R MP +A IW S
Sbjct: 372 GLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSS 431
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL+A +G+VEL + A +H++ L+ ++S Y +LSNIYA ++ E+ + R M++ +
Sbjct: 432 LLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQI 491
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+K PGCS IEV+ +HEFVAG HP +Y +L
Sbjct: 492 EKEPGCSLIEVNGEIHEFVAGGRLHPQAQEVYSLL 526
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 292/490 (59%), Gaps = 5/490 (1%)
Query: 2 IVRGLDQNNHLL--SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+V GL N+H L R ++S ++ YA SIF DV++YNT I+ L P +
Sbjct: 12 VVSGL-LNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKRPYD 70
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+++L+N++ L+PDNY++ FVLKA + G+++HCQ + G+ + H+ ++LI
Sbjct: 71 SLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIH 130
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY S I +A V E S N N+M++GY G ++ ARA+F+ M K+V SW+
Sbjct: 131 MYTSSGSIVEAECVLREFSEE--NTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWS 188
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I G + EA+ LF M V + P+E A+++ LSACA LGA+ G WIH YI++
Sbjct: 189 AIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRI 248
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + + L+ ALIDMYAK G I + F M + ++TW +I+G A++G ++ ++F
Sbjct: 249 GADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKCFELF 308
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + PN + F+AILSAC H G VE G+ YFN M GI P IE YGCM+DLLGR
Sbjct: 309 EEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGR 368
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L+EAE+ + MP + N+ IWGS+L+A + D+ G A +HLI+LEP + Y +
Sbjct: 369 AGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLA 428
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
++ G E+ KIRK++ D G++ G S+IEV +HEF+ GDT H + +Y++
Sbjct: 429 GLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDTIHNEAAEIYKVW 488
Query: 480 CKINGQMKFA 489
+NG ++ A
Sbjct: 489 KGLNGLLEAA 498
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/460 (41%), Positives = 287/460 (62%), Gaps = 2/460 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + D+ ++ I Q + A+ + + + D L A
Sbjct: 329 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + +G+ IH ++ G +S +++ ALI MY+ C I ARK+FDE L ++ WN
Sbjct: 389 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLL--DLISWN 446
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+M++GY K ++NA+A+F+ M EK+V+SW+++I+GYAQ D +E + LF+ MQ+ KP
Sbjct: 447 SMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKP 506
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
DE +++ +SACA+L A+E G+W+H YI++ GL V L LIDMY K G + AL+VF
Sbjct: 507 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
M K + TW +I GLA++GL +LDMFS M++ V PNEITF+ +L AC H+GLV+
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 626
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ +F M + I+P ++ YGCM+DLLGRAG LQEAE+LL RMP + A WG+LL A
Sbjct: 627 EGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 686
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
+GD E+G + LI+L+P + G + +LSNIYA G+W++ +IR +M V K+P
Sbjct: 687 CKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIP 746
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
GCS IE + +HEF+AGD +HPD D + +L ++ ++K
Sbjct: 747 GCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 786
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 201/411 (48%), Gaps = 68/411 (16%)
Query: 49 KALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV-VKLSTIELGREIHCQTVGTGL 107
+A QT++P A LY + ++ L DNY++P +++A ++ S E +++H + G
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWE-AKQVHNHVLKLGF 244
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR--- 164
DSDV+V LI ++ C + DA +VF+E S V + WN+++AGY ++G++ A+
Sbjct: 245 DSDVYVRNTLINCFSVCSNMTDACRVFNESS--VLDSVSWNSILAGYIEIGNVEEAKHIY 302
Query: 165 ----------------------------ALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
LF+ M EK++++W+ LIA + Q + EAI
Sbjct: 303 HQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIR 362
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
F M V DE+ ++ALSACA L V +G+ IH+ + G + + L NALI MY+
Sbjct: 363 TFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYS 422
Query: 257 KSGKI-------------------------------GKALQVFENMKNKSVITWTTMIAG 285
K G I A +F++M K V++W++MI+G
Sbjct: 423 KCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISG 482
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
A + L E L +F M+ + KP+E T ++++SAC + +E G+ +K R G+
Sbjct: 483 YAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK-RNGLTI 541
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ +ID+ + G ++ A ++ M E + W +L+ + G VE
Sbjct: 542 NVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 591
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 41/297 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +IF + DV +++ I Q D + L+ ++Q S +PD + V+ A
Sbjct: 459 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 518
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L+ +E G+ +H GL +V + LI MY C C+ A +VF + + ++
Sbjct: 519 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK--GIST 576
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN ++ G A G + + ++ +F M+ +V
Sbjct: 577 WNALILGLAMNGLVES-------------------------------SLDMFSNMKKCHV 605
Query: 207 KPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
P+EI + L AC +G V+ G+ ++ I + + V ++D+ ++GK+ +A
Sbjct: 606 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 665
Query: 266 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAILS 319
++ M V TW ++ HG +M R+ R ++P+ F +LS
Sbjct: 666 ELLNRMPMTPDVATWGALLGACKKHGDS----EMGRRVGRKLIELQPDHDGFHVLLS 718
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/457 (39%), Positives = 281/457 (61%), Gaps = 4/457 (0%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
GL +N +LS F+ C+SL YA +IF H P++ L+N+ IKA +
Sbjct: 35 HGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHF 94
Query: 64 YNKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
+N ++ + + PDN++FP +LKA L +LG+ +H G V L+++Y+
Sbjct: 95 FNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYS 154
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+C + DA KVFDE+ R V VWN M+ G+ K+GDL LF+ M +++V+SW +I
Sbjct: 155 NCGKMEDANKVFDEMLHR--EVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMI 212
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL- 241
+ AQ + EA +FR M + +PD+ ++ L CA+LG V+ GEWIH+Y + GL
Sbjct: 213 SCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLL 272
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
++ + N+L+D Y K G + A +VF M K+V++W MI+GL L+G G +++F +
Sbjct: 273 RKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEK 332
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M R V P++ TF+ +L+ C H G V+ GR F+ M ++ + PK+E YGC++DLLGR G
Sbjct: 333 MARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCG 392
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
+++EA L+R MP NAA+WG+LL+A +GD E+ E A + L++LEP NSGNY +LSN
Sbjct: 393 HVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSN 452
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
+YA +WNE K+R +M+ +G+KK PG S ++ S R
Sbjct: 453 VYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQDSHR 489
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/460 (41%), Positives = 287/460 (62%), Gaps = 2/460 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + D+ ++ I Q + A+ + + + D L A
Sbjct: 194 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 253
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + +G+ IH ++ G +S +++ ALI MY+ C I ARK+FDE L ++ WN
Sbjct: 254 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLL--DLISWN 311
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+M++GY K ++NA+A+F+ M EK+V+SW+++I+GYAQ D +E + LF+ MQ+ KP
Sbjct: 312 SMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKP 371
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
DE +++ +SACA+L A+E G+W+H YI++ GL V L LIDMY K G + AL+VF
Sbjct: 372 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 431
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
M K + TW +I GLA++GL +LDMFS M++ V PNEITF+ +L AC H+GLV+
Sbjct: 432 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 491
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ +F M + I+P ++ YGCM+DLLGRAG LQEAE+LL RMP + A WG+LL A
Sbjct: 492 EGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 551
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
+GD E+G + LI+L+P + G + +LSNIYA G+W++ +IR +M V K+P
Sbjct: 552 CKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIP 611
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
GCS IE + +HEF+AGD +HPD D + +L ++ ++K
Sbjct: 612 GCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 651
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 222/461 (48%), Gaps = 70/461 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++ G + + SR I + F DY IF + +++N I+A QT++P
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAV-VKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A LY + ++ L DNY++P +++A ++ S E +++H + G DSDV+V L
Sbjct: 61 FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWE-AKQVHNHVLKLGFDSDVYVRNTL 119
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR------------- 164
I ++ C + DA +VF+E S V + WN+++AGY ++G++ A+
Sbjct: 120 INCFSVCSNMTDACRVFNESS--VLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIA 177
Query: 165 ------------------ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
LF+ M EK++++W+ LIA + Q + EAI F M V
Sbjct: 178 SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 237
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI----- 261
DE+ ++ALSACA L V +G+ IH+ + G + + L NALI MY+K G I
Sbjct: 238 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 297
Query: 262 --------------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
A +F++M K V++W++MI+G A + L E
Sbjct: 298 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 357
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M+ + KP+E T ++++SAC + +E G+ +K R G+ + +ID
Sbjct: 358 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK-RNGLTINVILGTTLID 416
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ + G ++ A ++ M E + W +L+ + G VE
Sbjct: 417 MYMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 456
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 41/297 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +IF + DV +++ I Q D + L+ ++Q S +PD + V+ A
Sbjct: 324 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 383
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L+ +E G+ +H GL +V + LI MY C C+ A +VF + + ++
Sbjct: 384 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK--GIST 441
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN ++ G A G + + ++ +F M+ +V
Sbjct: 442 WNALILGLAMNGLVES-------------------------------SLDMFSNMKKCHV 470
Query: 207 KPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
P+EI + L AC +G V+ G+ ++ I + + V ++D+ ++GK+ +A
Sbjct: 471 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 530
Query: 266 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAILS 319
++ M V TW ++ HG +M R+ R ++P+ F +LS
Sbjct: 531 ELLNRMPMTPDVATWGALLGACKKHGDS----EMGRRVGRKLIELQPDHDGFHVLLS 583
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 296/500 (59%), Gaps = 35/500 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
I G+D +++ + I C+ + SD YA + +PD +++NT ++ ++D P
Sbjct: 28 FIKYGVDTDSYFTGKLILHCA-ISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEP 86
Query: 58 LNAVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
N+V ++ ++ + PD++SF FV+KAV ++ G ++HCQ + GL+S + V
Sbjct: 87 HNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTT 146
Query: 117 LIQMYASCKCIYDARKVFDEL---SLRVWNVAV--------------------------W 147
LI MY C C+ ARKVFDE+ +L WN + W
Sbjct: 147 LIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSW 206
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+AGY K G+L +A+ +F M ++ +SW+T+I G A NE+ FR +Q +
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+E+++ LSAC+Q G+ E G+ +H ++E+ G + IV +NNALIDMY++ G + A V
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 268 FENMKNKS-VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
FE M+ K +++WT+MIAGLA+HG G EA+ +F+ M V P+ I+FI++L AC H GL
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+E G YF+ MK Y IEP+IE YGCM+DL GR+G LQ+A + +MP A +W +LL
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A + +G++EL E Q L +L+P+NSG+ +LSN YA G+W + IRK M +KK
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Query: 447 MPGCSYIEVSKRVHEFVAGD 466
S +EV K +++F AG+
Sbjct: 507 TTAWSLVEVGKTMYKFTAGE 526
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/465 (40%), Positives = 286/465 (61%), Gaps = 2/465 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F + D+ ++ I Q + A+IL+ ++ A+ + D VL
Sbjct: 237 GNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVL 296
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L + G+ +H V G+++ V++ ALI MY+SC+ + A+K+F E +
Sbjct: 297 SACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESC--CLD 354
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN+M++GY K G++ ARALF+ M +K+ +SW+ +I+GYAQ D+ E + LF+ MQ+
Sbjct: 355 QISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQI 414
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E KPDE +++ +SAC L A++ G+WIH YI + GL + L LI+MY K G +
Sbjct: 415 EGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVED 474
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
AL+VF+ ++ K V TW +I GLA++GL ++L FS M+ V PNEITF+A+L AC H
Sbjct: 475 ALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRH 534
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+GLV+ G R+FN M + I P I+ YGCM+DLLGRAG L+EAE+L+ MP + + WG
Sbjct: 535 MGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWG 594
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A YGD E GE + L++L P + G +LSNIYA G W + ++R +MR G
Sbjct: 595 ALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHG 654
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
V K PGCS IE RVHEF+AGD +HP + + +L ++ ++K
Sbjct: 655 VVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKL 699
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 230/461 (49%), Gaps = 70/461 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI+ G +++ SR + + L F + +Y IF+H P+ ++ NT +K Q ++P
Sbjct: 49 MILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPC 108
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAV-VKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ +Y + S + DNY++P + ++ ++L+ + G+ I + G DSDV++ L
Sbjct: 109 KAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD-GKCIQDHVLKVGFDSDVYIQNTL 167
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI- 176
I MYA C + DARKVFD S V ++ WN+M+AGY VG++ A+ +++ M E+NVI
Sbjct: 168 INMYAVCGNLSDARKVFDGSS--VLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIA 225
Query: 177 ------------------------------SWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
SW+ LI+ Y Q + EA+ LF+ M +
Sbjct: 226 SNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGI 285
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA---------- 256
DE+ +L+ LSAC++L V G+ +H + + G+ T V L NALI MY+
Sbjct: 286 MVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQK 345
Query: 257 ---------------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
K G+I KA +F++M +K ++W+ MI+G A E
Sbjct: 346 LFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTET 405
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M+ KP+E ++++SAC H+ ++ G ++ + + G++ I +I+
Sbjct: 406 LVLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWIHAYIRKNGLKINIILGTTLIN 464
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ + G +++A ++ + + E + W +L+ + G V+
Sbjct: 465 MYMKLGCVEDALEVFKGLE-EKGVSTWNALILGLAMNGLVD 504
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/547 (36%), Positives = 313/547 (57%), Gaps = 71/547 (12%)
Query: 28 YAYSIFTHKSKPDVY--LYNTTIKALCQTDNPLNAVILY-NKIQASALRPDNYSFPFVLK 84
YA S+F +P + YN ++AL +P +A+ L+ + +++ PD ++ LK
Sbjct: 68 YAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALK 127
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY------ASCKCIYDARK------ 132
+ ++ T+++GR I V GL +D V+++LI MY A+ + ++DA +
Sbjct: 128 SCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVM 187
Query: 133 -----------------------------VFDELSL------------------------ 139
FDE++L
Sbjct: 188 WNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVD 247
Query: 140 ---RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
V N + ++ YAK G+L AR LF+ M ++V++W+ +I+GY Q DQ EA+
Sbjct: 248 EKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALA 307
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LF MQ+ V+P+++ M++ LSACA LGA+E G+W+H+YI + L+ + L AL+D YA
Sbjct: 308 LFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYA 367
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G I A++ FE+M K+ TWT +I G+A +G GREAL++FS M +A ++P ++TFI
Sbjct: 368 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG 427
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L AC H LVE GRR+F+ M YGI+P+ E YGC++DLLGRAG + EA + +R MP E
Sbjct: 428 VLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
NA IW +LL++ ++ +VE+GE AL+ ++ L P +SG+Y +LSNIYA +G+W + IR
Sbjct: 488 PNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIR 547
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
K M+D G++K PGCS IE+ V EF A D+ HP +YQ + ++ ++K A ++ N
Sbjct: 548 KEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTA 607
Query: 497 SGVLESD 503
LE D
Sbjct: 608 DVRLEVD 614
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 38/298 (12%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+GL +N +L++ ID + G A +F DV ++ I Q D A+ L
Sbjct: 249 KGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALAL 308
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++++Q + + P++ + VL A L +E G+ +H L + + AL+ YA
Sbjct: 309 FSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAK 368
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C CI DA + F+ S+ V N W ++ G A N R
Sbjct: 369 CGCIDDAVEAFE--SMPVKNSWTWTALIKGMA-----TNGRG------------------ 403
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLN 242
EA+ LF M+ +++P ++ + L AC+ VE G + + Q YG+
Sbjct: 404 --------REALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIK 455
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREAL 296
++D+ ++G I +A Q M + + W +++ A+H +G EAL
Sbjct: 456 PRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 285/455 (62%), Gaps = 7/455 (1%)
Query: 41 VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE----LGR 96
V L++ I+AL ++ P A+ LY + + L P ++ P +LK++ + L
Sbjct: 37 VELHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLAL 96
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYAS-CKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
+H V GLD V V ALI+++A + D + + + + +NT++ YA
Sbjct: 97 TVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAA--AVDASTFNTLITAYA 154
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+ G L +ARALF+ M +N +SW+ ++ GY Q EA+ +F RMQ E+V+PD+ ++
Sbjct: 155 RAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVG 214
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L+ACAQ GA+E G+W+H Y++ +G+ + AL+DMY+K G++ A+ VFE M+ K+
Sbjct: 215 VLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKN 274
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V+ WTTMI GLA+HG G EA+ +F++ME + ++P++I FI +L AC H GLV+ GR F+
Sbjct: 275 VLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFD 334
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
M +YGI+PKIE YGCM+DLL R G+L EA++++++MP E +A IWG+L+A + +V
Sbjct: 335 SMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNV 394
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
E E +H I LEP SG Y +LSNIYA GR + +IR +MR+ GV K PGCS +EV
Sbjct: 395 EFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEV 454
Query: 456 SKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
+ +H+F+ GD SHP + +I+ +++ E
Sbjct: 455 NGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEE 489
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F + ++ + Q + A+ ++ ++QA +RPD+ VL A +
Sbjct: 162 ARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQ 221
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+E G+ +H G+ ++ AL+ MY+ C + A VF+ + + NV W
Sbjct: 222 HGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYK--NVLAWT 279
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ G A G + +EA+ LF +M+ ++P
Sbjct: 280 TMIKGLAMHG-------------------------------RGSEAVMLFAQMESSGIRP 308
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D+IA + L AC G V+ G E + + +YG+ + ++D+ A++G + +A ++
Sbjct: 309 DDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEM 368
Query: 268 FENMK-NKSVITWTTMIAGLALH 289
+ M + W ++AG H
Sbjct: 369 IQKMPMEPDALIWGALMAGCRFH 391
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N + +D S G A +F +V + T IK L AV+L+
Sbjct: 239 GIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLF 298
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYAS 123
++++S +RPD+ +F VL A ++ GRE+ V G+ + ++ + A
Sbjct: 299 AQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLAR 358
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
+Y+A+++ ++ + + +W ++AG
Sbjct: 359 NGFLYEAKEMIQKMPMEP-DALIWGALMAG 387
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/481 (40%), Positives = 295/481 (61%), Gaps = 19/481 (3%)
Query: 28 YAYSIFTHKS-KPDVYLYNTTIKALC------QTDNPLNAVILYNKIQASALRPDNYSFP 80
YA IF + K + +L+N I+A+ Q +P++ +Y +++ + PD ++FP
Sbjct: 10 YANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPIS---VYLRMRNHRVSPDFHTFP 66
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
F+L + + LG+ H Q + GLD D V +L+ MY+SC + A++VFD+ +
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN++V YAK G +++AR LF+ M E+NVISW+ LI GY + EA+ LFR
Sbjct: 127 --DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 201 MQVEN-----VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
MQ+ V+P+E M LSAC +LGA+E G+W+H YI++Y + + L ALIDMY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 256 AKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEIT 313
AK G + +A +VF + K V ++ MI LA++GL E +FS M + + PN +T
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ IL AC H GL+ G+ YF +M +GI P I+ YGCM+DL GR+G ++EAE + M
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P E + IWGSLL+ S + GD++ E AL+ LI+L+P NSG Y +LSN+YA GRW E
Sbjct: 365 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 424
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
IR M G+ K+PGCSY+EV VHEFV GD S + +R+Y +L +I +++ A ++
Sbjct: 425 CIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVT 484
Query: 494 N 494
+
Sbjct: 485 D 485
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/554 (35%), Positives = 304/554 (54%), Gaps = 77/554 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ GL+ N+++ FI +C+ LG A +F ++P+ +N + Q + L+
Sbjct: 45 IVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDV 104
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V+L+ ++ + P+ ++FP V+K+ + + G E+HC G S+ V ALI M
Sbjct: 105 VVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHM 164
Query: 121 YA---------------------------------SCKCIYDARKVFDELSLRVWNVAVW 147
Y+ +C+ + AR++FD R +V +W
Sbjct: 165 YSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQR--DVVLW 222
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N +V+GY ++GD+ AR LF+ M +++V+SW T+++GYA + + LF M V NV
Sbjct: 223 NVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVY 282
Query: 208 ------------------------------------------PDEIAMLAALSACAQLGA 225
P++ ++A L+AC++LG
Sbjct: 283 SWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGD 342
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+E+G+W+H Y E G + + NALIDMYAK G I KAL VF+ + K +ITW T+I G
Sbjct: 343 LEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIING 402
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
LA+HG +AL +F RM+RA +P+ +TF+ ILSAC H+GLV G +F M Y I P
Sbjct: 403 LAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVP 462
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+IE YGCM+DLLGRAG + +A ++R+MP E +A IW +LL A +Y +VE+ E ALQ L
Sbjct: 463 QIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMAELALQRL 522
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
I+LEP+N GN+ ++SNIY LGR + +++ MRD G +K+PGCS I + + EF +
Sbjct: 523 IELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSMVEFYSL 582
Query: 466 DTSHPDFDRLYQIL 479
D HP+ D +Y+ L
Sbjct: 583 DERHPETDSIYRAL 596
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 113/296 (38%), Gaps = 49/296 (16%)
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
+I Q V GL+ + +V + I A I AR+VFD+ + N A WN M
Sbjct: 40 QIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKTAQP--NGATWNAM------ 91
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
GYAQ + + + LF RM P+
Sbjct: 92 -------------------------FRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMV 126
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK--IGKALQVFENMKNK 274
+ +CA A + GE +H + + G + + ALI MY+ G + A +VF M++K
Sbjct: 127 VKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDK 186
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE--ITFIAILSACCHVGLVELGRR 332
+V WT ++A H R DM S + P + + ++S +G + R
Sbjct: 187 NVFAWTAIVAA---HVACR---DMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARE 240
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
F+ M R + + ++ G ++ KL MP N W L+
Sbjct: 241 LFDRMPDR-----DVMSWNTVLSGYATNGEVESFVKLFEEMPVR-NVYSWNGLIGG 290
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 10/180 (5%)
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
I++L C +L I I +GL + + I A+ G I +A +VF+
Sbjct: 26 ISLLRTCGTCVRL------HQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDK 79
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
+ TW M G A + + +F+RM RA PN TF ++ +C + G
Sbjct: 80 TAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEG 139
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG--YLQEAEKLLRRMPFEANAAIWGSLLAA 388
++ R G + +I + G ++ +A K+ M + N W +++AA
Sbjct: 140 EEVHCVVAKR-GFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMR-DKNVFAWTAIVAA 197
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/547 (36%), Positives = 303/547 (55%), Gaps = 72/547 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DYA SIF +PD YN I+ +P A++L+ ++ ++++PD ++FP +LK
Sbjct: 75 DYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVC 134
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L + G +IH + G S V LI MYA+C + AR+VFDE+S R NV
Sbjct: 135 SRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER--NVRT 192
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVI----------------------SW------ 178
WN+M AGY K G+ LF M E ++ W
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 179 -----------TTLIAGYAQMDQPNEAITLF----RR----------------------- 200
T+L+ YA+ Q + A LF RR
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 201 ----MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
MQ N+ P+EI M++ LS+CA LGA+E G+W+H +I++ + V L AL+D YA
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYA 372
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G + +++VF M K+V++WT +I GLA +G G++AL+ F M V+PN++TFI
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+LSAC H GLV+ GR F M +GIEP+IE YGCM+D+LGRAG ++EA + ++ MP +
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQ 492
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
NA IW +LLA+ ++ +VE+GE +L+ LI LEP +SG+Y +LSNIYA +GRW ++ K+R
Sbjct: 493 PNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVR 552
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
M++ G+KK PGCS IE+ +HEF A D H + +Y + + Q+K A ++ N
Sbjct: 553 GEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTA 612
Query: 497 SGVLESD 503
L+++
Sbjct: 613 EARLDAE 619
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 117/229 (51%), Gaps = 2/229 (0%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
++ A ++F + E + ++ +I G+ P+EAI LF+ M +V+PDE L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C++L A+ GE IH I + G + + N LI MYA G++ A +VF+ M ++V TW
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
+M AG G E + +F M ++ +E+T +++L+AC + +ELG + N
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG-EWINRYVE 252
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G++ ++D+ + G + A +L +M + W ++++
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSAMISG 300
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 130/305 (42%), Gaps = 38/305 (12%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+GL N L++ +D + G D A +F + DV ++ I Q A+ L
Sbjct: 254 KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDL 313
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++++Q + + P+ + +L + L +E G+ +H + V + AL+ YA
Sbjct: 314 FHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAK 373
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + + +VF ++ ++ NV W ++ G A G A F LM EK
Sbjct: 374 CGSVESSIEVFGKMPVK--NVLSWTVLIQGLASNGQGKKALEYFYLMLEK---------- 421
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLN 242
NV+P+++ + LSAC+ G V+ G + + +G+
Sbjct: 422 ---------------------NVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIE 460
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDM 298
+ ++D+ ++G I +A Q +NM + + W T++A +H +G E+L
Sbjct: 461 PRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQ 520
Query: 299 FSRME 303
+E
Sbjct: 521 LIILE 525
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/494 (39%), Positives = 292/494 (59%), Gaps = 13/494 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ RGL + L + S +SLG ++ ++F P+V+L+ I A D +A
Sbjct: 46 LLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHA 105
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y+++ ++P+ F L +++K T+ R +H + GL S ++V L+
Sbjct: 106 LSYYSQMLTHPIQPN----AFTLSSLLKACTLHPARAVHSHAIKFGLSSHLYVSTGLVDA 161
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA + A+K+FD + R ++ + M+ YAK G L AR LFE M K+V+ W
Sbjct: 162 YARGGDVASAQKLFDAMPER--SLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNV 219
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE-------NVKPDEIAMLAALSACAQLGAVELGEWIH 233
+I GYAQ PNEA+ FR+M + V+P+EI ++A LS+C Q+GA+E G+W+H
Sbjct: 220 MIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVH 279
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+Y+E G+ V + AL+DMY K G + A +VF+ M+ K V+ W +MI G +HG
Sbjct: 280 SYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSD 339
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
EAL +F M VKP++ITF+A+L+AC H GLV G F+ MK YG+EPK+E YGCM
Sbjct: 340 EALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCM 399
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNS 413
++LLGRAG +QEA L+R M E + +WG+LL A I+ +V LGE + L+ +S
Sbjct: 400 VNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASS 459
Query: 414 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFD 473
G Y +LSN+YA W K+R +M+ GV+K PGCS IEV RVHEFVAGD HP
Sbjct: 460 GTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSK 519
Query: 474 RLYQILCKINGQMK 487
+Y +L K+NG +K
Sbjct: 520 DIYSMLEKMNGWLK 533
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + + GL+ LN L YA G + ++ +F N +V WT +I A L
Sbjct: 42 IHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDL 101
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
AL +S+M ++PN T ++L AC R + ++G+ +
Sbjct: 102 FHHALSYYSQMLTHPIQPNAFTLSSLLKAC-----TLHPARAVHSHAIKFGLSSHLYVST 156
Query: 352 CMIDLLGRAGYLQEAEKLLRRMP 374
++D R G + A+KL MP
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMP 179
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 278/452 (61%), Gaps = 5/452 (1%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR----EI 98
L+N I+AL + P A+ LY + + P ++ P +LK++ + R +
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAV 232
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H V GL + V ALI+++A V + V + + +NT++ YA+ G
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASV-DASTFNTLITAYARAG 291
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+ +ARALF+ M +N +SW+ ++ GY Q EA+ LF RMQ + V+PD+ ++ L+
Sbjct: 292 RVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLA 351
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
ACAQLG +E G+W+H Y++ + V L AL+DMYAK G++ A++VF+ MK K+V+
Sbjct: 352 ACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLA 411
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
WTTMI GLA+HG G EAL++FS+MER VKP++I FI L AC H GLV+ GR F+ M
Sbjct: 412 WTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMV 471
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+YGI+PKIE YGCM+DLL R G L EA +++ +MP + +A IWG+L+A + +VEL
Sbjct: 472 RKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELA 531
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
E ++H I+LEP SG Y +L NIYA GR + +IR +MR+ GV K PGCS +E+
Sbjct: 532 EYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGV 591
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
+H+F+ GD SHP + + +I+ +++ E
Sbjct: 592 IHQFIVGDLSHPFIEEILSKWDEIDSRIRLEE 623
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F + ++ + Q + A+ L+ ++QA +RPD+ VL A +
Sbjct: 296 ARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQ 355
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L +E G+ +H + V + AL+ MYA C + A +VF + + NV W
Sbjct: 356 LGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEK--NVLAWT 413
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ G A G + +EA+ LF +M+ VKP
Sbjct: 414 TMIKGLAMHG-------------------------------RGSEALELFSQMERLGVKP 442
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D+IA + AL AC G V+ G E + + +YG+ + ++D+ A++G + +A ++
Sbjct: 443 DDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREM 502
Query: 268 FENMKNK-SVITWTTMIAGLALH 289
E M K + W ++AG H
Sbjct: 503 VEKMPMKPDALIWGALMAGCRFH 525
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + +D + G A +F + +V + T IK L A+ L+++++
Sbjct: 380 LGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLG 439
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDA 130
++PD+ +F L A ++ GRE+ V G+ + ++ + A + +A
Sbjct: 440 VKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEA 499
Query: 131 RKVFDELSLRVWNVAVWNTMVAG 153
R++ +++ ++ + +W ++AG
Sbjct: 500 REMVEKMPMKP-DALIWGALMAG 521
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/482 (40%), Positives = 289/482 (59%), Gaps = 37/482 (7%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D N HL+ + + + F A IF P+++ +NT I+ +++NP AV L+++
Sbjct: 69 DFNKHLIFALVSLSAPMSF---AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQ 125
Query: 67 IQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+ A S++ PD ++FPF+ KAV KL + LG IH V G DS
Sbjct: 126 MHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDS---------------- 169
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
LR V N++V Y+ +G L +A +FE+M+ ++ ++W ++I G+
Sbjct: 170 -------------LRF----VQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGF 212
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
A PNEA+TL+R M E V+PD M++ LSAC +LGA+ LGE +H Y+ + GL
Sbjct: 213 ALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQ 272
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+NAL+D+Y+K G A +VF+ M+ +SV++WT++I GLA++GLG EAL +F +ER
Sbjct: 273 HASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQ 332
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+KP+EITF+ +L AC H G+++ G YF MK YGI P+IE +GCM+DLL RAG + +
Sbjct: 333 GLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGD 392
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A +R MP NA IW +LL A I+G +ELGE A + +LE +SG++ +LSN+YA
Sbjct: 393 AYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYAS 452
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
RW + +RK+M GVKK PG S +E+ RV+EF+ GD SHP + Y +L KI
Sbjct: 453 ERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQL 512
Query: 486 MK 487
+K
Sbjct: 513 LK 514
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 39/310 (12%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++VR G D + + + S LG AY +F S D +N+ I P
Sbjct: 161 VVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNE 220
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ LY ++ + + PD ++ +L A V+L + LG +H V GL + H AL+
Sbjct: 221 ALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLD 280
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+Y+ C DA+KVFDE+ R +V W +++ G A G
Sbjct: 281 LYSKCGNFRDAQKVFDEMEER--SVVSWTSLIVGLAVNG--------------------- 317
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQ 238
NEA+ LF ++ + +KP EI + L AC+ G ++ G + E+
Sbjct: 318 ----------LGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEE 367
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGRE 294
YG+ + + ++D+ ++GK+G A NM + + W T++ +HG LG
Sbjct: 368 YGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEV 427
Query: 295 ALDMFSRMER 304
A R+E+
Sbjct: 428 ARAEIQRLEQ 437
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/481 (40%), Positives = 285/481 (59%), Gaps = 3/481 (0%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+ HL + +++ + LG A +F H PD+ + I T P A +++ +
Sbjct: 35 KRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHL 94
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
S LRPD++ + A + GR +H L SD V ALI MY+ I
Sbjct: 95 FHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAI 154
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
A VF + ++ +V+ W +++ G+ K D+ AR +F+ M +N +SWT +I GY Q
Sbjct: 155 EVACSVFKTMEIK--DVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQ 212
Query: 188 MDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ P + LF+ M+ E P I ++A LS CA +GA +LG +H Y+ + L+ V
Sbjct: 213 GEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVT 272
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+NNAL+DMYAKSG + AL++F+ M + V +WTTMI+GLALHG G AL+ FS M ++
Sbjct: 273 VNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSG 332
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V PNE+T +++LSAC H GLV GR F M +GI+PKI+ YGCM+DLLGRAG L+EA
Sbjct: 333 VVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREA 392
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
++L+ MP + ++ IW SLL+A ++G++ L E A + +I+LEP + G Y +L NIY
Sbjct: 393 KELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSA 452
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW ++ K RK MRD VKK PGCS++EV+ VHEF+A D H +Y +L I QM
Sbjct: 453 SRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQM 512
Query: 487 K 487
K
Sbjct: 513 K 513
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 74/354 (20%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL--DSDVHVVAALIQMYASCKCIYDARK 132
+ +F F+L+ K ++E ++IH + V GL H+ L+ Y DA+K
Sbjct: 2 NTQTFYFLLQ---KCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 58
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF+ + +++SWT LI+ Y QP
Sbjct: 59 VFNHIQ---------------------------------NPDIVSWTCLISLYLHTSQPC 85
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
+A ++F + ++PD ++ A+SAC + G +H + ++ L + + NALI
Sbjct: 86 KAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALI 145
Query: 253 DMYAKSGKIGKALQVFENMKNKSV-------------------------------ITWTT 281
DMY++SG I A VF+ M+ K V ++WT
Sbjct: 146 DMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTA 205
Query: 282 MIAGLALHGLGREALDMFSRMERARVK--PNEITFIAILSACCHVGLVELGRRYFNIMKS 339
MI G + L++F M RA K P IT +A+LS C +G +LG + +
Sbjct: 206 MITGYVQGEVPIPGLELFQEM-RAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYV-N 263
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ ++ + ++D+ ++G L A K+ + MP + + W ++++ ++G
Sbjct: 264 KTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP-KRDVFSWTTMISGLALHG 316
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 278/452 (61%), Gaps = 5/452 (1%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR----EI 98
L+N I+AL + P A+ LY + + P ++ P +LK++ + R +
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAV 232
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H V GL + V ALI+++A V + V + + +NT++ YA+ G
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASV-DASTFNTLITAYARAG 291
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+ +ARALF+ M +N +SW+ ++ GY Q EA+ LF RMQ + V+PD+ ++ L+
Sbjct: 292 RVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLA 351
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
ACAQLG +E G+W+H Y++ + V L AL+DMYAK G++ A++VF+ MK K+V+
Sbjct: 352 ACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLA 411
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
WTTMI GLA+HG G EAL++FS+MER VKP++I FI L AC H GLV+ GR F+ M
Sbjct: 412 WTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMV 471
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+YGI+PKIE YGCM+DLL R G L EA +++ +MP + +A IWG+L+A + +VEL
Sbjct: 472 RKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELA 531
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
E ++H I+LEP SG Y +L NIYA GR + +IR +MR+ GV K PGCS +E+
Sbjct: 532 EYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGV 591
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
+H+F+ GD SHP + + +I+ +++ E
Sbjct: 592 IHQFIVGDLSHPFIEEILSKWDEIDSRIRLEE 623
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F + ++ + Q + A+ L+ ++QA +RPD+ VL A +
Sbjct: 296 ARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQ 355
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L +E G+ +H + V + AL+ MYA C + A +VF + + NV W
Sbjct: 356 LGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEK--NVLAWT 413
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ G A G + +EA+ LF +M+ VKP
Sbjct: 414 TMIKGLAMHG-------------------------------RGSEALELFSQMERLGVKP 442
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D+IA + AL AC G V+ G E + + +YG+ + ++D+ A++G + +A ++
Sbjct: 443 DDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREM 502
Query: 268 FENMKNK-SVITWTTMIAGLALH 289
E M K + W ++AG H
Sbjct: 503 VEKMPMKPDALIWGALMAGCRFH 525
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + +D + G A +F + +V + T IK L A+ L+++++
Sbjct: 380 LGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLG 439
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDA 130
++PD+ +F L A ++ GRE+ V G+ + ++ + A + +A
Sbjct: 440 VKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEA 499
Query: 131 RKVFDELSLRVWNVAVWNTMVAG 153
R++ +++ ++ + +W ++AG
Sbjct: 500 REMVEKMPMKP-DALIWGALMAG 521
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/480 (39%), Positives = 293/480 (61%), Gaps = 9/480 (1%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV-ILYNKIQASALRP 74
F+ CSS+ A +F D+ +NT I + P A+ + + + A+ P
Sbjct: 164 FLAVCSSMA---EARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTP 220
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D + V+ +L +ELGR +H G+ V ++ ++ MY C + A+ VF
Sbjct: 221 DEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVF 280
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
+ + + + W TM+ GYA+ G +++AR +F+ M E++V W L+ GY Q + EA
Sbjct: 281 EGIDKK--TIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEA 338
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ LF MQ V+PD+I M+ LSAC+QLGA+E+G W+H+YI++ ++ V L L+DM
Sbjct: 339 LRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDM 398
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
Y+K G I KA++VF+ + K+ +TWT MI+GLA HG A+ F RM ++P+EITF
Sbjct: 399 YSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITF 458
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
I +LSACCH GLV+ G+ +F++M S+Y +E K++ Y CM+DLLGRAGYL EAE L+ MP
Sbjct: 459 IGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMP 518
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
E +A +WG+L A ++G++ LGE A L++L+P +SG Y +L+N+YA ++ K
Sbjct: 519 MEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADK 578
Query: 435 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
+R +MR +GV+K+PGCS IE++ VHEF+ D SH D +Y L +I Q+ EH N
Sbjct: 579 VRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQI---EHTAN 635
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 193/400 (48%), Gaps = 71/400 (17%)
Query: 44 YNTTIKALCQ-TDNPL--NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHC 100
YN ++AL TD L + LY + SA RPD+ +FPF+LKA +L G +
Sbjct: 86 YNAALRALSLCTDRGLVTRCLPLYCSLLRSA-RPDHLTFPFLLKACARLQERNYGNAVLG 144
Query: 101 QTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
+ G +DV VV A + A C + +ARK+FD +R ++ WNT++ GY + G
Sbjct: 145 NVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVR--DLVSWNTLIGGYVRRG-- 200
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSA 219
P EA+ +F RM + V PDE+ M+ +S
Sbjct: 201 -----------------------------VPREALEMFWRMVGDGAVTPDEVTMIGVVSG 231
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
AQL +ELG +H Y+E +G+ V L N ++DMY K G + +A VFE + K++++W
Sbjct: 232 SAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSW 291
Query: 280 TTMIAGLALHGL-------------------------------GREALDMFSRMERARVK 308
TTMI G A GL G+EAL +F M+ A V+
Sbjct: 292 TTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVE 351
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P++IT + +LSAC +G +E+G + + R + + ++D+ + G +++A +
Sbjct: 352 PDDITMVNLLSACSQLGALEMGMWVHHYIDRRR-VSLSVMLGTNLVDMYSKCGNIEKAIR 410
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
+ + +P E NA W ++++ +G ++ Q +I+L
Sbjct: 411 VFKEIP-EKNALTWTAMISGLANHGHADVAIKYFQRMIEL 449
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 311/539 (57%), Gaps = 72/539 (13%)
Query: 28 YAYSIFTHKSKPDVY--LYNTTIKALCQTDNPLNAVILYNKI--QASALRPDNYSFPFVL 83
YA S+F +P + YN ++A +P +A+ L+ ++ ASA D ++ L
Sbjct: 68 YAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACAL 127
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC------KCIYDARK----- 132
K+ ++ +++GR + V GL +D V+++LI MYASC + ++DA +
Sbjct: 128 KSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVV 187
Query: 133 ------------------------------VFDELSL--------RV-------W----- 142
FDE++L R+ W
Sbjct: 188 MWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHV 247
Query: 143 -------NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
N + ++ YAK G++ AR LF+ M ++V++W+ +I+GY Q DQ EA+
Sbjct: 248 DEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREAL 307
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF MQ+ V+P+++ M++ LSACA LGA+E G+W+H+Y+ + L+ L AL+D Y
Sbjct: 308 GLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFY 367
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G I A++ FE+M K+ TWT +I G+A +G GREAL++FS M A ++P ++TFI
Sbjct: 368 AKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFI 427
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L AC H LVE GRR+F+ M YGI+P++E YGCM+DLLGRAG + EA + +R MP
Sbjct: 428 GVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPI 487
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
E NA IW +LL++ ++ +V +GE AL+ +I L P +SG+Y +LSNIYA G+W ++ +
Sbjct: 488 EPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMV 547
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
RK M+D G++K PGCS IE+ V EF A D+ HP+ +YQ + ++ G++K A ++ N
Sbjct: 548 RKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPN 606
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 123/297 (41%), Gaps = 38/297 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL +N L++ +D + G A +F DV ++ I Q D A+ L+
Sbjct: 251 GLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLF 310
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++Q + + P++ + VL A L +E G+ +H L + AL+ YA C
Sbjct: 311 SEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKC 370
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
CI DA + F+ S+ V N W ++ G A N R
Sbjct: 371 GCIDDAVEAFE--SMPVKNSWTWTALIKGMA-----TNGRG------------------- 404
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
EA+ LF M+ ++P ++ + L AC+ VE G + YG+
Sbjct: 405 -------REALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKP 457
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH---GLGREAL 296
V ++D+ ++G + +A Q M + + W +++ A+H G+G EAL
Sbjct: 458 RVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEAL 514
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 292/477 (61%), Gaps = 3/477 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YAY IF+ P+++++N I+ P A Y ++ S + PDN +FPF++KA
Sbjct: 71 YAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAST 130
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
++ + +G + H Q V G +DV+V +L+ MYA+C I A ++F ++ R +V W
Sbjct: 131 EMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFR--DVVSW 188
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+MVAGY K G + +AR +F+ M +N+ +W+ +I GYA+ + +AI LF M+ E V
Sbjct: 189 TSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVV 248
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+E M++ +S+CA LGA+E GE H Y+ + + + L AL+DMY + G+I KA++V
Sbjct: 249 ANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRV 308
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE + +K ++W+++I GLA+HG +A+ FS+M R P +IT A+LSAC H GLV
Sbjct: 309 FEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLV 368
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G + MK YGIEP++E YGC++D+LGRAG L EAE + +MP + NA I G+LL
Sbjct: 369 DKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLG 428
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A IY + E+ E LI+++P +SG Y +LSNIYA G+W + +R +M++ VKK
Sbjct: 429 ACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKP 488
Query: 448 PGCSYIEVSKRVHEFVAG-DTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
PG S IE+ ++++F G D HP+ ++ ++ +I G+++ + N + D
Sbjct: 489 PGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVD 545
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L A +F + N+ + LI ++ +P++A + +M + PD I + A
Sbjct: 69 LGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 128
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
++ V +GE H+ I ++G V + N+L+ MYA G I A ++F M + V++W
Sbjct: 129 STEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSW 188
Query: 280 TTMIAGLALHGL---GRE----------------------------ALDMFSRMERARVK 308
T+M+AG G+ RE A+D+F M+R V
Sbjct: 189 TSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVV 248
Query: 309 PNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
NE ++++S+C H+G +E G R ++KS + + ++D+ R G +++A
Sbjct: 249 ANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGT--ALVDMYWRCGEIEKAI 306
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL--EPHNSGNYAILS 420
++ +P + ++ W S++ ++G +++L P + A+LS
Sbjct: 307 RVFEELP-DKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLS 360
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 34/242 (14%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F +++ ++ I + + A+ L+ ++ + + V+
Sbjct: 199 GMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVI 258
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ L +E G H V + + ++ + AL+ MY C I A +VF+EL
Sbjct: 259 SSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELP----- 313
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+K+ +SW+++I G A ++AI F +M
Sbjct: 314 ----------------------------DKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVR 345
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
P +I + A LSAC+ G V+ G E N YG+ + ++DM ++GK+
Sbjct: 346 LGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLA 405
Query: 263 KA 264
+A
Sbjct: 406 EA 407
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 292/489 (59%), Gaps = 39/489 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYS-IFTHKSKP---DVYLYNTTIKALCQTDNPLN- 59
GL N +L++F S + +DYA S +F+ ++ D +L+NT I+A QT + +
Sbjct: 56 GLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDK 115
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ LY + A+ P+ +++PFVLKA L + LG+ +H V G D D+HV ++
Sbjct: 116 ALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVH 175
Query: 120 MYASCK-CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY+ C I ARKVFDE+ + W+ M+ GYA+VG
Sbjct: 176 MYSCCAGGINSARKVFDEMPKS--DSVTWSAMIGGYARVG-------------------- 213
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+ EA+ LFR MQ+ V PDEI M++ LSAC LGA+ELG+WI YIE+
Sbjct: 214 -----------RSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIER 262
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ ++ V ++NALIDM+AK G I KAL++F M K++++WT++I G+A+HG G+EA +
Sbjct: 263 HEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCL 322
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M + V P+++ FI +LSAC H GLVE GR YF M +Y + PKIE YGCM+D+
Sbjct: 323 FEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYC 382
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G ++EA + +R MP E N I +L++A +G+ +LGE + L+K EP + NY +
Sbjct: 383 RTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVL 442
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNIYA W + KIR+VM G+KK+PG + IE+ ++EFVAGD SH +Y++
Sbjct: 443 LSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEM 502
Query: 479 LCKINGQMK 487
+ ++ +MK
Sbjct: 503 VDEMGREMK 511
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/466 (40%), Positives = 291/466 (62%), Gaps = 5/466 (1%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DY+Y + + P + +NT I+A T NP ++ ++ K+ + + PD ++PF++KA
Sbjct: 64 DYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKAT 123
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
KL ELG +H V +G + D + +LI MYASC+ I ARKVFDE+ + N+
Sbjct: 124 SKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRK--NLVT 181
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN M+ GYAK GDLN AR +F LM EK+V+SW++LI GY + EA+ LF RM +
Sbjct: 182 WNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGP 241
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+E+ +++AL ACA LGA+E G +H YI + L + L +L+DMYAK G I +AL
Sbjct: 242 MANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALT 301
Query: 267 VFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
VF +++ V+ W +I GLA HGL +EA+++F M+ + P+EIT++ +LS C H
Sbjct: 302 VFRACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHG 361
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLVE +F+ ++ ++G+ PK+E Y CM+D L RAG + EA + L +MP + +++ G+
Sbjct: 362 GLVEEAWYFFDCLR-KHGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGA 420
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL+ +G +++ + + L++L+P++ G Y LSNIYA RW+++ IR+ M GV
Sbjct: 421 LLSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGV 480
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
KK PG S+IEV +H F+A D +H D ++++ +L I QMK E
Sbjct: 481 KKSPGFSFIEVYGVLHRFMAHDKTHGDCEQIFMMLNLIVDQMKPIE 526
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 302/492 (61%), Gaps = 9/492 (1%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL +N +LSR ++ C S G +A+ +F H P + ++NT IKAL LNA+
Sbjct: 32 GLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMIKALLLRGEFLNAIA 91
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
+++ I + + PD Y+ P+VLKA +++ I LG IH T+ G + V +L+ MY
Sbjct: 92 VFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYR 151
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
S + AR+VFDE+ + W M+ GYA +GD++ AR LF++ T K+ W +I
Sbjct: 152 SFDNMRSARQVFDEMP--ELSAVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMI 209
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+GY Q + E + +FR MQ+ V+PDE ++ LSACA +GA++ G WIH Y+ + GL
Sbjct: 210 SGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLP 269
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ ++ LIDMYAK G + A +F M + + W MI+G+A+ G G A+ +F M
Sbjct: 270 LTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEM 329
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
E+A +KP+ ITFIA+L+AC + G+V+ G R +N M + + IEPK E YGC+IDLL R G
Sbjct: 330 EKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGR 389
Query: 363 LQEAEKLLRRMPFEAN----AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
+EAE +++R+P A+ A W + L+A +G + E A + L +LE H SG Y +
Sbjct: 390 FEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQLERH-SGAYVL 448
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSN+YA LG+ ++ ++R +M+ GV+K+PGCS I+V+ V+EF+AG+ +H D ++ +
Sbjct: 449 LSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLV 508
Query: 479 LCKINGQMKFAE 490
L ++N Q+ A+
Sbjct: 509 LEELNKQIVEAD 520
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/482 (39%), Positives = 289/482 (59%), Gaps = 37/482 (7%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D N HL+ + + + F A IF P+++ +NT I+ +++NP AV L+++
Sbjct: 69 DFNKHLIFALVSLSAPMSF---AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQ 125
Query: 67 IQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+ A S++ PD ++FPF+ KAV KL + LG IH V G DS V +L+ MY+
Sbjct: 126 MHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS--- 182
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
V G+A+ +A +FE+M+ ++ ++W ++I G+
Sbjct: 183 -------------------------VFGFAE-----SAYQVFEIMSYRDRVAWNSVINGF 212
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
A PNEA+TL+R M E V+PD M++ LSAC +LGA+ LGE +H Y+ + GL
Sbjct: 213 ALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQ 272
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+NAL+D+Y+K G A +VF+ M+ +SV++WT++I GLA++GLG EAL +F +ER
Sbjct: 273 HASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQ 332
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+KP+EITF+ +L AC H G+++ G YF MK YGI P+IE +GCM+DLL RAG + +
Sbjct: 333 GLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGD 392
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A +R MP NA IW +LL A I+G +ELGE A + +LE +SG++ +LSN+YA
Sbjct: 393 AYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYAS 452
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
RW + +RK+M GVKK PG S +E+ RV+EF+ GD SHP + Y +L KI
Sbjct: 453 ERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQL 512
Query: 486 MK 487
+K
Sbjct: 513 LK 514
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 39/310 (12%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++VR G D + + + S GF++ AY +F S D +N+ I P
Sbjct: 161 VVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNE 220
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ LY ++ + + PD ++ +L A V+L + LG +H V GL + H AL+
Sbjct: 221 ALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLD 280
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+Y+ C DA+KVFDE+ R +V W +++ G A G
Sbjct: 281 LYSKCGNFRDAQKVFDEMEER--SVVSWTSLIVGLAVNG--------------------- 317
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQ 238
NEA+ LF ++ + +KP EI + L AC+ G ++ G + E+
Sbjct: 318 ----------LGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEE 367
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGRE 294
YG+ + + ++D+ ++GK+G A NM + + W T++ +HG LG
Sbjct: 368 YGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEV 427
Query: 295 ALDMFSRMER 304
A R+E+
Sbjct: 428 ARAEIQRLEQ 437
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/481 (40%), Positives = 284/481 (59%), Gaps = 3/481 (0%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+ HL + +++ + LG A +F H PD+ + I T P A +++ +
Sbjct: 286 KRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHL 345
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
S LRPD++ + A + GR +H L SD V ALI MY+ I
Sbjct: 346 FHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAI 405
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
A VF + ++ +V+ W +++ G+ K D+ AR +F+ M +N +SWT +I GY Q
Sbjct: 406 EVACSVFKTMEIK--DVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQ 463
Query: 188 MDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ P + LF+ M+ E P I ++A LS CA +GA +LG +H Y+ + L+ V
Sbjct: 464 GEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVT 523
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+NNAL+DMYAKSG + AL++F+ M + V +WTTMI+GLALHG G AL+ FS M ++
Sbjct: 524 VNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSG 583
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
PNE+T +++LSAC H GLV GR F M +GI+PKI+ YGCM+DLLGRAG L+EA
Sbjct: 584 XXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREA 643
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
++L+ MP + ++ IW SLL+A ++G++ L E A + +I+LEP + G Y +L NIY
Sbjct: 644 KELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSA 703
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW ++ K RK MRD VKK PGCS++EV+ VHEF+A D H +Y +L I QM
Sbjct: 704 SRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQM 763
Query: 487 K 487
K
Sbjct: 764 K 764
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 74/354 (20%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL--DSDVHVVAALIQMYASCKCIYDARK 132
+ +F F+L+ K ++E ++IH + V GL H+ L+ Y DA+K
Sbjct: 253 NTQTFYFLLQ---KCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 309
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF+ + +++SWT LI+ Y QP
Sbjct: 310 VFNHIQ---------------------------------NPDIVSWTCLISLYLHTSQPC 336
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
+A ++F + ++PD ++ A+SAC + G +H + ++ L + + NALI
Sbjct: 337 KAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALI 396
Query: 253 DMYAKSGKIGKALQVFENMKNKSV-------------------------------ITWTT 281
DMY++SG I A VF+ M+ K V ++WT
Sbjct: 397 DMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTA 456
Query: 282 MIAGLALHGLGREALDMFSRMERARVK--PNEITFIAILSACCHVGLVELGRRYFNIMKS 339
MI G + L++F M RA K P IT +A+LS C +G +LG + +
Sbjct: 457 MITGYVQGEVPIPGLELFQEM-RAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYV-N 514
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ ++ + ++D+ ++G L A K+ + MP + + W ++++ ++G
Sbjct: 515 KTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP-KRDVFSWTTMISGLALHG 567
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/483 (38%), Positives = 311/483 (64%), Gaps = 8/483 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSS-LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL ++ + SR + C+S G +YAY +F P+++ +NT I+ ++ P N
Sbjct: 45 LIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQN 104
Query: 60 AVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ LY + + S ++P ++P V KA +L G ++H + + GL++D + ++
Sbjct: 105 SISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTIL 164
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY +C +ARKVFD +++ WNTM+ G AK G ++ +R LF+ M+ +N +SW
Sbjct: 165 FMYVNCGFTSEARKVFDRG--MDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSW 222
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-- 236
++I+GY + + +A+ LF++MQVE ++P E M++ L+ACA LGA+ GEWIH+Y+
Sbjct: 223 NSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVK 282
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+++ LN IV A+IDMY+K G I KA+QVF++ + + W +MI GLA++G EAL
Sbjct: 283 KKFELNPIVV--TAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEAL 340
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+FS ++ + ++P++++FIA+L+AC H G+V+ + YF +M+ +Y I+P I+ + CM+D+
Sbjct: 341 QLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDV 400
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG L+EAE+L+R M + +A IWGSLL + YG++++ + A HLI+L P S ++
Sbjct: 401 LGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSSF 460
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+++N YA + E+ K R +++ + K PGCS IEV VHEFVAG +HP+ +Y
Sbjct: 461 VLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIEVGGEVHEFVAGGRAHPEIKEIY 520
Query: 477 QIL 479
++L
Sbjct: 521 RVL 523
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 68/330 (20%)
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
+T++ ++IH Q + TGL D + + ++ AS
Sbjct: 33 TTMKDLKKIHSQLIKTGLAKDTNAASRILAFCAS-------------------------- 66
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKP 208
GD+N A +F + N+ +W T+I G+++ P +I+L+ M + + V+P
Sbjct: 67 ------PAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQP 120
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + A AQL G +H + + GL + N ++ MY G +A +VF
Sbjct: 121 QRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVF 180
Query: 269 ENMKNKSVITWTTMIAGLALHGL-----------------------------GR--EALD 297
+ + ++ W TMI G+A GL GR +AL+
Sbjct: 181 DRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALE 240
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDL 356
+F +M+ R++P+E T +++L+AC +G + G + M K ++ + P + +ID+
Sbjct: 241 LFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIV--VTAIIDM 298
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ G + +A ++ + P + W S++
Sbjct: 299 YSKCGSIDKAVQVFQSAP-RRGLSCWNSMI 327
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/477 (40%), Positives = 290/477 (60%), Gaps = 5/477 (1%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
LD N + FI S G +YA IF +V +N + + + L+
Sbjct: 167 LDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFI 226
Query: 66 KIQ--ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL-DSDVHVVAALIQMYA 122
+++ + P++ + +L A KL + G+ I+ + + G+ + ++ + ALI M+A
Sbjct: 227 EMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFA 286
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
SC + AR VFDE+ R +V W ++V G+A ++ AR F+ M E++ +SWT +I
Sbjct: 287 SCGEMDAARGVFDEMKTR--DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMI 344
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
GY +M++ E +TLFR MQ+ NVKPDE M++ L+ACA LGA+ELGEW YI++ +
Sbjct: 345 DGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIK 404
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ NALIDMY K G + KA ++F M+ K TWT MI GLA +G G EAL MFS M
Sbjct: 405 NDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYM 464
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
A V P+EIT+I ++ AC HVGLV G+ +F+ M ++GI+P + YGCM+DLLGRAG+
Sbjct: 465 LEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGH 524
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L+EA +++ MP + N+ +WGSLL A ++ +V+L E A +++LEP N Y +L NI
Sbjct: 525 LKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNI 584
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
YA +W +RK+M + G+KK+PGCS +E++ V+EFVAGD SHP +Y L
Sbjct: 585 YAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKL 641
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 204/433 (47%), Gaps = 70/433 (16%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I GL N+ L++ I C + D YA +F +P V+++NT IK + + +
Sbjct: 59 IKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSES 118
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALI 118
V LY + ++PD ++FPF+LK K ++ G+ + V G LDS++ V I
Sbjct: 119 GVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFI 178
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+++ C + ARK+FD W V WN +++GY + ++ LF M +K
Sbjct: 179 HLFSLCGLVNYARKIFDMGD--GWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKK----- 231
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIE 237
E V P+ + ++ LSAC++L + G+ I+N YI+
Sbjct: 232 ------------------------CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIK 267
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA---------- 287
+ + + L NALIDM+A G++ A VF+ MK + VI+WT+++ G A
Sbjct: 268 EGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARK 327
Query: 288 ----------------LHGLGR-----EALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+ G R E L +F M+ + VKP+E T ++IL+AC H+G
Sbjct: 328 YFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGA 387
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ELG + + I+ +ID+ + G +++A+K+ M + + W +++
Sbjct: 388 LELG-EWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQ-KKDKFTWTAMI 445
Query: 387 A--ASNIYGDVEL 397
A+N +G+ L
Sbjct: 446 VGLANNGHGEEAL 458
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 159/366 (43%), Gaps = 47/366 (12%)
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCK---CIYDARKVFDELSLRVWNVAVWNTMVAG 153
+IH QT+ TGL S+ H+ + ++ K +Y ARKVFDE+ +V +WNTM+ G
Sbjct: 53 QIHSQTIKTGLSSN-HLFLTKVIIFCCTKESGDVYYARKVFDEIPQP--SVFIWNTMIKG 109
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
Y+++ + ++L++ M V N+KPD
Sbjct: 110 YSRI-------------------------------NCSESGVSLYKLMLVHNIKPDGFTF 138
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
L + A++ G+ + N+ +G L++ + + I +++ G + A ++F+
Sbjct: 139 PFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGD 198
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAILSACCHVGLVELG 330
V+TW +++G E+ +F ME+ V PN +T + +LSAC + + G
Sbjct: 199 GWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGG 258
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ +N +EP + +ID+ G + A + M + W S++
Sbjct: 259 KCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMK-TRDVISWTSIVTG-- 315
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
+ + + A ++ ++ + ++ + + Y + R+ E + + RDM + +
Sbjct: 316 -FANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKE---VLTLFRDMQMSNVKPD 371
Query: 451 SYIEVS 456
+ VS
Sbjct: 372 EFTMVS 377
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/472 (41%), Positives = 278/472 (58%), Gaps = 34/472 (7%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F D +N I Q+ A+ + +++ + + P+ + VL
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + ++ELG + GL S++ +V ALI MY+
Sbjct: 272 SACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYS--------------------- 310
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
K GDL+ AR LFE + EK++ISW +I GY+ M+ EA+ LFR+MQ
Sbjct: 311 ------------KCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ 358
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIG 262
NV+P+++ ++ L ACA LGA++LG+WIH YI++ L T L +LIDMYAK G I
Sbjct: 359 SNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIE 418
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A QVF MK KS+ +W MI+GLA+HG AL++F +M +P++ITF+ +LSAC
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVELGR+ F+ M Y I PK++ YGCMIDLLGRAG EAE L++ M + + AIW
Sbjct: 479 HAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIW 538
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
GSLL A ++G+VELGE A +HL +LEP N G Y +LSNIYA GRW++ +IR + D
Sbjct: 539 GSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDK 598
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
G+KK+PGCS IEV VHEF+ GD H +Y++L +I+ ++ A H+ +
Sbjct: 599 GMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPD 650
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 232/399 (58%), Gaps = 5/399 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL LS+ I+ C S G YA +F +P+ +++NT I+ + +P+
Sbjct: 55 IIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPV 114
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ Y ++ + P++Y+FPF+LK+ K+ + G++IH + GL+SD V +LI
Sbjct: 115 GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLI 174
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA + A VF + SLR + + ++ GY G L++AR LFE + ++ +SW
Sbjct: 175 NMYAQNGELGYAELVFSKSSLR--DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSW 232
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+IAGYAQ + EA+ F+ M+ NV P+E M+ LSACAQ G++ELG W+ ++IE
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED 292
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+GL + + L NALIDMY+K G + KA +FE + K +I+W MI G + +EAL +
Sbjct: 293 HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALAL 352
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M+++ V+PN++TF++IL AC ++G ++LG+ + ++ + +ID+
Sbjct: 353 FRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYA 412
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
+ G ++ A+++ M ++ + W ++++ ++G +
Sbjct: 413 KCGNIEAAKQVFAGMKPKSLGS-WNAMISGLAMHGHANM 450
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 63/307 (20%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
++IH Q + TGL + ++ LI+ A +
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCA-------------------------------IS 77
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
G+L+ A LFE + + N W T+I G + P AI + RM + V+P+
Sbjct: 78 PFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPF 137
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG------------- 262
L +CA++GA + G+ IH ++ + GL + ++ +LI+MYA++G++G
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197
Query: 263 ------------------KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
A ++FE + + ++W MIAG A G EAL F M+R
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR 257
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
A V PNE T + +LSAC G +ELG + ++ +G+ + +ID+ + G L
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLD 316
Query: 365 EAEKLLR 371
+A L
Sbjct: 317 KARDLFE 323
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N L + ID + G + A +F + +N I L + A+ L+ +++
Sbjct: 400 NTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMR 459
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
PD+ +F VL A +ELGR+ V + + ++ +Q Y +
Sbjct: 460 DEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV------EDYDISPKLQHYGCMIDLL 513
Query: 129 DARKVFDELSLRVWNV------AVWNTM-----VAGYAKVGDLNNARALFELMTE 172
+FDE + N+ A+W ++ V G ++G+ A+ LFEL E
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEF-AAKHLFELEPE 567
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/497 (38%), Positives = 295/497 (59%), Gaps = 37/497 (7%)
Query: 10 NHL-LSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+HL L + ID S SS GF+ A D L N+ I+ ++ L++V +Y ++
Sbjct: 74 DHLNLMKLIDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDSNKHLHSVFIYTQM 133
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
+ + PD+ +FP VLK+V +L ELG+ IHC + G +S+V+V AL+ MY +C +
Sbjct: 134 WKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSV 193
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
D AR +F+ + ++N++SW LI GY
Sbjct: 194 SD---------------------------------ARQVFDEIPDRNIVSWNALITGYNH 220
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
+ I +FR MQ+ KP E+ M+ L ACA LGA+ G WI +YI+ L V +
Sbjct: 221 NRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFV 280
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
ALIDMYAK G + +A ++F+ M+ K+V TW +I+G A++G G AL FSRM +
Sbjct: 281 GTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKF 340
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
KP+E+TF+ +L ACCH GLV GR YF MK +G+ P+IE YGCM+DLLGRAG+L EA+
Sbjct: 341 KPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQ 400
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 427
+L++ M + + IW LL A I+G+++LGE A++ L++LEP+N NY +L+N+YA
Sbjct: 401 QLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQ 460
Query: 428 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
RW++ G++R++M V+K+PGCS IE+ V+EFV + P F+ +Y++L +N ++K
Sbjct: 461 RWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLK 520
Query: 488 FAEHLQNEFSGVLESDV 504
A ++ + +G+ D+
Sbjct: 521 LAGYVAD--TGMASYDI 535
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 130/311 (41%), Gaps = 44/311 (14%)
Query: 1 MIVRGLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+I G + N ++ + ++ +CSS+ SD A +F ++ +N I
Sbjct: 168 IIQMGFESNVYVSTALVNMYGTCSSV--SD-ARQVFDEIPDRNIVSWNALITGYNHNRMF 224
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+ ++ ++Q + +P + VL A L + GR I L +V V AL
Sbjct: 225 RKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTAL 284
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MYA C + +A K+F ++RV NV WN +++GYA G
Sbjct: 285 IDMYAKCGVVDEAEKIFK--AMRVKNVYTWNVLISGYAMNG------------------- 323
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYI 236
+ A+ F RM +E KPDE+ L L AC G V G + +
Sbjct: 324 ------------RGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMK 371
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LG 292
E++GL + ++D+ ++G + +A Q+ + M I W ++ +HG LG
Sbjct: 372 EEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLG 431
Query: 293 REALDMFSRME 303
A+ +E
Sbjct: 432 EFAIKKLLELE 442
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/448 (40%), Positives = 283/448 (63%), Gaps = 3/448 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL Q+N +L+ FI C+S YA +F+ P+++L+N+ IKA + +++L+
Sbjct: 36 GLHQSNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLF 95
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ + PD Y+F +LK+ L LG+ + + G + ++++Y C
Sbjct: 96 SSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCC 155
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ + DA K+FDE+S R +V VWN M+ G+ K G+++ LF M+E++++SW T+I+
Sbjct: 156 EKMEDAWKMFDEMSHR--DVVVWNLMIRGFCKTGNVDFGLCLFRQMSERSLVSWNTIISC 213
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNT 243
AQ + EA+ LF++M+ KPDE+ ++ L C++LGA+E+G+ IH+Y G L
Sbjct: 214 LAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVG 273
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
I + N+LID Y K G I KA +F+ M KSV++W T+I G AL+G G A+D+F M
Sbjct: 274 ITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMR 333
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ +KPN+ TF+A+L+AC H GL+E GR F+ M Y I+PK+E +GCM+DLLGR G +
Sbjct: 334 KEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCV 393
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA KL++ MP + NA +WG++L A +G+++L E A++ LI LEP NSGNY +LSN+
Sbjct: 394 EEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNML 453
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCS 451
A GRW E +R+ MR+ VKK PG S
Sbjct: 454 AEEGRWEEVENVRQWMREKSVKKAPGQS 481
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 111/253 (43%), Gaps = 34/253 (13%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + ++GL+ + I + A +I A ++F N ++ + ++I +L
Sbjct: 28 IHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLFNSIIKAHSLSVP 87
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG--------RRYFNIMKS-RYG 342
++L +FS M+ R+ P++ TF +L +C ++ LG RR F S R G
Sbjct: 88 FHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIG 147
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
+ +E Y C +++A K+ M + +W ++ G+V+ G C
Sbjct: 148 V---VELYVC-------CEKMEDAWKMFDEMS-HRDVVVWNLMIRGFCKTGNVDFGLCLF 196
Query: 403 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY-- 452
+ ++ + ++ + + A R E+ ++ + M + G K +P CS
Sbjct: 197 R---QMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLG 253
Query: 453 -IEVSKRVHEFVA 464
+EV +R+H + +
Sbjct: 254 ALEVGQRIHSYAS 266
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/513 (37%), Positives = 294/513 (57%), Gaps = 33/513 (6%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
++ ++++FI SCSSL DYA SIF + YL+N I+ L + +++ + +
Sbjct: 72 SSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLM 131
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
+ PD +FPFVLK+ LS +GR +HC + GL+ D V +L+ MY + +
Sbjct: 132 LKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEEL 191
Query: 128 YDARKVFDEL-------SLRVWNVAV--------------------------WNTMVAGY 154
A KVFDE S+ +WNV + WN+++ G+
Sbjct: 192 GSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGF 251
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
K+GD+ A+ LF M EKNV+SWTT++ G++Q P +A+ F M E +P++ ++
Sbjct: 252 MKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIV 311
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
+ALSACA++GA++ G IHNY+ G + + AL+DMYAK G I A +VF K K
Sbjct: 312 SALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEK 371
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
++ W+ MI G A+HG R+AL F M+ KP+ + F+A+L+AC H G V G ++F
Sbjct: 372 GLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFF 431
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ M+ Y IEP ++ Y ++D+LGRAG L EA K +R MP + +WG+L A + +
Sbjct: 432 DNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKN 491
Query: 395 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
VE+ E A + L++LEP + G+Y LSN YA +GRW+++ ++R MRD G K PG S+IE
Sbjct: 492 VEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIE 551
Query: 455 VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
V ++H FVAGD +H +Y L +I+ +
Sbjct: 552 VDHKLHRFVAGDNTHNRAVEIYSKLDEISASAR 584
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/496 (40%), Positives = 306/496 (61%), Gaps = 11/496 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKA--LCQTDNPLNAVILYNKI 67
N LL I SS G YA+ +F KPDV++YNT IKA + T + + I + +
Sbjct: 51 NKLLKVLI--ASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMV 108
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
+ S P+ Y+F FV KA + G +I + GL+S++ V A+I+MYA+ +
Sbjct: 109 RVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLV 168
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
+AR+VFD SL ++ WN M+ GY G++ A+ +F+ M+E++V+SWTT+IAGY Q
Sbjct: 169 DEARRVFD-WSLDQ-DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQ 226
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
+ EA+ LF M P+E + +AL+ACA L A++ G WIH YI++ + L
Sbjct: 227 VGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERL 286
Query: 248 NNALIDMYAKSGKIGKALQVFEN---MKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+L+DMYAK G+I A +VF + +K K V W MI G A+HG +EA+D+F +M+
Sbjct: 287 LASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEAIDLFEQMKV 345
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+V PN++TF+A+L+AC H LVE GR YF M S YGIEP+IE YGCM+DLLGR+G L+
Sbjct: 346 EKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLK 405
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE+ + MP +A IWG+LL A I+ D+E G+ + + +L+ + G + +L+N+Y+
Sbjct: 406 EAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYS 465
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
G+W+E+ +R+ + G KK PGCS IE++ H+F+ GD SHP +LY L ++
Sbjct: 466 ASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTT 525
Query: 485 QMKFAEHLQNEFSGVL 500
++K A ++ EF VL
Sbjct: 526 KLKNAGYVP-EFGEVL 540
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 126/321 (39%), Gaps = 70/321 (21%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYN------------------- 45
GL+ N + + I ++ G D A +F D+Y +N
Sbjct: 147 GLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMF 206
Query: 46 ------------TTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE 93
T I Q A+ L++++ + P+ ++ L A L ++
Sbjct: 207 DEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALD 266
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE---LSLRVWNVAVWNTM 150
GR IH + + + ++A+L+ MYA C I A KVF + L L+VW WN M
Sbjct: 267 QGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWP---WNAM 323
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+ GYA G + EAI LF +M+VE V P++
Sbjct: 324 IGGYAMHG-------------------------------KSKEAIDLFEQMKVEKVSPNK 352
Query: 211 IAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ +A L+AC+ VE G + + YG+ + ++D+ +SG + +A +
Sbjct: 353 VTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVF 412
Query: 270 NMKNKSVIT-WTTMIAGLALH 289
NM T W ++ +H
Sbjct: 413 NMPMAPDATIWGALLGACRIH 433
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/466 (39%), Positives = 278/466 (59%), Gaps = 7/466 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQT----DNPLNAVI-LYNKIQASALRPDNYSFPFVL 83
A F SK DV ++ I Q+ L+ V L +++ + P+ +F +L
Sbjct: 334 ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
KA +E GR+IH + G +SD + A+ MYA C IY+A +VF ++ + N
Sbjct: 394 KACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK--N 451
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W +++ Y K GDL +A +F M+ +NV+SW +IAGYAQ + L M+V
Sbjct: 452 VVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKV 511
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E +PD + +++ L AC L A+E G+ +H + GL + + +LI MY+K G++ +
Sbjct: 512 EGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTE 571
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF+ + N+ + W M+AG HG+G EA+D+F RM + RV PNEITF A++SAC
Sbjct: 572 ARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGR 631
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ GR F IM+ + ++P + YGCM+DLLGRAG LQEAE+ ++RMP E + ++W
Sbjct: 632 AGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWH 691
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A + +V+L E A H+++LEP N+ Y LSNIYA GRW++S K+RKVM D G
Sbjct: 692 ALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKG 751
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+KK G S IE+ R+H FVA D +HP+ D ++ L + +MK A
Sbjct: 752 LKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEA 797
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 206/450 (45%), Gaps = 49/450 (10%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL + +L + I+ S G +F + DV +++ I A ++P A +
Sbjct: 108 GLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTF 167
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + + P+ +F +LKA S +E REIH +G+++DV V ALI MY+ C
Sbjct: 168 ERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKC 227
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I A ++F ++ R NV W ++ A+ LN
Sbjct: 228 GEISLACEIFQKMKER--NVVSWTAIIQANAQHRKLN----------------------- 262
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
EA L+ +M + P+ + ++ L++C A+ G IH++I + GL T
Sbjct: 263 --------EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETD 314
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL-GREALD----MF 299
V + NALI MY K I A + F+ M + VI+W+ MIAG A G +E+LD +
Sbjct: 315 VVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLL 374
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
RM R V PN++TF++IL AC G +E GR+ + S+ G E + ++ +
Sbjct: 375 ERMRREGVFPNKVTFMSILKACSVHGALEQGRQ-IHAEISKVGFESDRSLQTAIFNMYAK 433
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G + EAE++ +M N W SLL GD+ E ++ N ++ ++
Sbjct: 434 CGSIYEAEQVFSKME-NKNVVAWASLLTMYIKCGDLTSAEKVFS---EMSTRNVVSWNLM 489
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
YA +SG I KV + K+ G
Sbjct: 490 IAGYA------QSGDIAKVFELLSSMKVEG 513
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 227/533 (42%), Gaps = 81/533 (15%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ + + + I S G A IF + +V + I+A Q A LY
Sbjct: 209 GMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELY 268
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+ + + P+ +F +L + + GR IH GL++DV V ALI MY C
Sbjct: 269 EKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKC 328
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
CI DAR+ FD +S R +V W+ M+AGYA+ +G
Sbjct: 329 NCIQDARETFDRMSKR--DVISWSAMIAGYAQ--------------------------SG 360
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + +E L RM+ E V P+++ ++ L AC+ GA+E G IH I + G +
Sbjct: 361 YQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESD 420
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT----------------------- 281
L A+ +MYAK G I +A QVF M+NK+V+ W +
Sbjct: 421 RSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMST 480
Query: 282 --------MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
MIAG A G + ++ S M+ +P+ +T I+IL AC + +E G +
Sbjct: 481 RNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG-KL 539
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + G+E +I + + G + EA + ++ A W ++LA YG
Sbjct: 540 VHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVA-WNAMLAG---YG 595
Query: 394 DVELGECAL----QHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
+G A+ + L + P N + + + G E +I ++M++ + PG
Sbjct: 596 QHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE-DFRMKPG 654
Query: 450 CSY----IEVSKR------VHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAE 490
+ +++ R EF+ PD + +L CK + ++ AE
Sbjct: 655 KQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAE 707
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 174/348 (50%), Gaps = 37/348 (10%)
Query: 51 LCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD 110
LC+ A+ L I+ L ++ ++ +++ KL E G+ +H
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVH----------- 101
Query: 111 VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
K DEL L + ++ + N+++ Y+K GD+ + +F M
Sbjct: 102 ---------------------KQLDELGLAI-DIYLGNSLINFYSKFGDVASVEQVFRRM 139
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
T ++V++W+++IA YA + P +A F RM+ N++P+ I L+ L AC +E
Sbjct: 140 TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAR 199
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
IH ++ G+ T V + ALI MY+K G+I A ++F+ MK ++V++WT +I A H
Sbjct: 200 EIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHR 259
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EA +++ +M +A + PN +TF+++L++C + GRR + + R G+E +
Sbjct: 260 KLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISER-GLETDVVVA 318
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVE 396
+I + + +Q+A + RM + + W +++A A + Y D E
Sbjct: 319 NALITMYCKCNCIQDARETFDRMS-KRDVISWSAMIAGYAQSGYQDKE 365
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/494 (38%), Positives = 293/494 (59%), Gaps = 38/494 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYS-IFTHKSKP--DVYLYNTTIKALCQTD-N 56
+I G N +L++F + S+L YA S +F+ + D +L++T I+A ++ +
Sbjct: 30 IIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAESSQS 89
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
NA+ YN + + P+ Y+FPFVLKA L + LG+ +H V G D D+ V
Sbjct: 90 KHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNT 149
Query: 117 LIQMYASCKCIYD-ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
++ MY C + ARK+FDE+ + W M+ GYA++G
Sbjct: 150 MVHMYCCCSGGMEFARKLFDEMP--KLDPVTWTAMIGGYARLG----------------- 190
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
Q A+ LFR+MQ+ V PD++ M++ LSAC LGA+ELG+WI +Y
Sbjct: 191 --------------QSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESY 236
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
IE+ + V L+NAL+DM+AK G + KAL +F NM +++++WT++I GLA+HG G EA
Sbjct: 237 IEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEA 296
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F M+ + + P +I FI +LSAC H GLVE GR+YF+ M ++GI PKIE YGCM+D
Sbjct: 297 VSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVD 356
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LL RAG + EA + + RMP E N IW +L++A ++G+++LGE + LI+ EP + N
Sbjct: 357 LLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESN 416
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIY + W + KIR M G++K+PG + IE+ +HEF+ GD SH ++ +
Sbjct: 417 YVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEI 476
Query: 476 YQILCKINGQMKFA 489
+++ ++ +MK A
Sbjct: 477 IKMVNEMGREMKRA 490
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 290/479 (60%), Gaps = 6/479 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ +N H+ + + + ++ G A ++ + + + ++N I + A +
Sbjct: 73 GMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSF 132
Query: 65 NKIQASALRPDNYSFPFVLKAVVK-LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ + P ++ VL A K + LG ++H + VG+G+ D+ V AL+ MYA
Sbjct: 133 VDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAE 192
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + A K+FD + +R +V W ++++G ++G ++ AR LF M E++ +SWT +I
Sbjct: 193 CADMESAWKLFDGMQVR--SVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMID 250
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q + EA+ +FR MQ NV DE M++ ++ACAQLGA+E+GEW+ Y+ + G+
Sbjct: 251 GYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKM 310
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ NALIDMY+K G I +AL VF++M ++ TWT +I GLA++G G EA++MF RM
Sbjct: 311 DAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMI 370
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
P+E+TFI +L+AC H GLV+ GR +F M+ Y I P + YGC+IDL GRAG +
Sbjct: 371 GVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKI 430
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
EA + +MP N+ IWG+LLAA ++G+ E+GE + L++++P NS Y +LSNIY
Sbjct: 431 TEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIY 490
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
A RW + ++R + + G+KK PGCS IE++ +HEFVAGD SHP +Y CK+
Sbjct: 491 AKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIY---CKL 546
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 161/370 (43%), Gaps = 69/370 (18%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+AV Y ++ A PD Y+FP +LKAV + S+ R +H V G+ + HV +L+
Sbjct: 26 DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
YA+ AR + E + W
Sbjct: 86 TAYAAGGDGAAARALLSERE---------------------------------RDTPVVW 112
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ-LGAVELGEWIHNYIE 237
LI+G+ + + EA F M P + ++ LSAC + G V LG +H +
Sbjct: 113 NALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVV 172
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG------- 290
G+ + + NAL+DMYA+ + A ++F+ M+ +SV++WT++++GL G
Sbjct: 173 GSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARD 232
Query: 291 -LG-----------------------REALDMFSRMERARVKPNEITFIAILSACCHVGL 326
G REAL+MF M+ + V +E T +++++AC +G
Sbjct: 233 LFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGA 292
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+E+G + + SR GI+ +ID+ + G ++ A + + M + W +++
Sbjct: 293 LEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM-HHRDKFTWTAII 350
Query: 387 --AASNIYGD 394
A N YG+
Sbjct: 351 LGLAVNGYGE 360
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 9/196 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +G+ + + + ID S G + A +F D + + I L A
Sbjct: 303 MSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEA 362
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQ 119
+ +++++ + PD +F VL A ++ GRE T + +V +I
Sbjct: 363 IEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIID 422
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVA-----GYAKVGDLNNARALFELMTEKN 174
++ I +A D++ + N +W T++A G +++G+L R L M +N
Sbjct: 423 LFGRAGKITEALDAIDQMPMTP-NSTIWGTLLAACRVHGNSEIGELVTERLL--QMDPEN 479
Query: 175 VISWTTLIAGYAQMDQ 190
+T L YA+ ++
Sbjct: 480 STVYTLLSNIYAKCNR 495
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 273/425 (64%), Gaps = 2/425 (0%)
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ + P ++ VL A K I LG ++H V +G+ D+ V ALI MYA C +
Sbjct: 117 TGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDA 176
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A ++F+ + +R N W ++++G+ ++G ++ AR LF+ M E++ +SWT +I GY Q
Sbjct: 177 AWELFEGMEVR--NTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAG 234
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
Q EA+ +FR MQ V+ DE M++ ++ACAQLGA+E GEW Y+ ++G+ + N
Sbjct: 235 QFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGN 294
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+DMY+K G I +AL VF+ M + TWT +I GLA++G G EA++MF RM R P
Sbjct: 295 ALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAP 354
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+E+TFI +L+AC H GLV+ GR +F M YGI P + +GC+IDLLGRAG L+EA +
Sbjct: 355 DEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALET 414
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ MP N+AIWG+LLAA ++G+ E+G+ A +HL++L+ N Y +LSN+YA RW
Sbjct: 415 IGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRW 474
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+ ++R+V+ + G+KK PGCS IE++ +HEF+AGD SHP +Y L K+ +K A
Sbjct: 475 EDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDA 534
Query: 490 EHLQN 494
++ +
Sbjct: 535 GYVPD 539
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 152/343 (44%), Gaps = 63/343 (18%)
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTI-ELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+Y + A RPD Y+FP +LKAV + +G +H V G++ + HV ++L+ MY
Sbjct: 5 VYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMY 64
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A+ AR + D A A+ GD + W L
Sbjct: 65 AARGDGAVARTLLD----------------AWPARGGD--------------TPVVWNAL 94
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+G+ + Q + F M V P + + LSAC + + LG +H + G+
Sbjct: 95 ISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGV 154
Query: 242 NTIVPLNNALIDMYAKS-------------------------------GKIGKALQVFEN 270
+ + NALIDMYA+ G++ +A +F+
Sbjct: 155 LPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDC 214
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M + ++WT MI G G REAL+MF M+ ++V+ +E T +++++AC +G +E G
Sbjct: 215 MPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETG 274
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ I SR+GI+ ++D+ + G +Q+A + + M
Sbjct: 275 -EWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEM 316
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 35/270 (12%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
LG D A ++F + D + I Q A+ ++ ++Q S +R D ++ V
Sbjct: 202 LGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSV 261
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
+ A +L +E G G+ D V AL+ MY+ C I A VF E+ +R
Sbjct: 262 VTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIR-- 319
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ +WT +I G A EAI +F RM
Sbjct: 320 -------------------------------DKFTWTAVILGLAVNGHGEEAINMFYRML 348
Query: 203 VENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
PDE+ + L+AC G V+ G ++ + YG+ V LID+ ++GK+
Sbjct: 349 RVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKL 408
Query: 262 GKALQVFENMKNK-SVITWTTMIAGLALHG 290
+AL+ NM + + W T++A +HG
Sbjct: 409 KEALETIGNMPMRPNSAIWGTLLAACRVHG 438
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ + + + +D S G A +F D + + I L + A+ ++
Sbjct: 285 GIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMF 344
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYAS 123
++ PD +F VL A ++ GR+ G+ G+ +V LI +
Sbjct: 345 YRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGR 404
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVA-----GYAKVGDLNNARALFELMTEKNVI 176
+ +A + + +R N A+W T++A G +++G L A L EL TE ++
Sbjct: 405 AGKLKEALETIGNMPMRP-NSAIWGTLLAACRVHGNSEIGQL-AAEHLLELDTENGMV 460
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/477 (40%), Positives = 275/477 (57%), Gaps = 39/477 (8%)
Query: 6 LDQNNHL----LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
DQ++H + I +S G+ A +F DV +N I +T N A+
Sbjct: 161 FDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEAL 220
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++ + ++PD + VL A + ++IELGR++H G S++ +V ALI +Y
Sbjct: 221 ELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 280
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G++ A LFE ++ K+VISW TL
Sbjct: 281 IKC---------------------------------GEVETASGLFEGLSYKDVISWNTL 307
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-- 239
I GY M+ EA+ LF+ M P+E+ ML+ L ACA LGA+++G WIH YI++
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 367
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G++ L +LIDMYAK G I A QVF++M N+S+ +W MI G A+HG A D+F
Sbjct: 368 GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIF 427
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
SRM + ++P++ITF+ +LSAC H G+++LGR F M Y I PK+E YGCMIDLLG
Sbjct: 428 SRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGH 487
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+G +EAE+++ M + + IW SLL A ++G+VELGE Q+LIK+EP NSG+Y +L
Sbjct: 488 SGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLL 547
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
SNIYA GRWNE K R ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 548 SNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIY 604
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 228/397 (57%), Gaps = 7/397 (1%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ I+ S S F YA S+F +P++ ++NT + + +P
Sbjct: 25 MIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P++Y+FPF+LKA K G++IH + G D D++V +L
Sbjct: 85 VSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSL 144
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY DARKVFD+ S R +V + ++ GYA G + +A+ +F+ + K+V+S
Sbjct: 145 IAMYVKNGRXEDARKVFDQSSHR--DVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVS 202
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W LI+GYA+ EA+ LF+ M NVKPDE M+ LSACAQ ++ELG +H++I+
Sbjct: 203 WNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWID 262
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + + NALID+Y K G++ A +FE + K VI+W T+I G L +EAL
Sbjct: 263 DHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 322
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ PNE+T ++IL AC H+G +++GR + I K G+ +ID+
Sbjct: 323 LFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDM 382
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ G ++ A+++ M + + W +++ ++G
Sbjct: 383 YAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHG 418
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/456 (40%), Positives = 280/456 (61%), Gaps = 31/456 (6%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+QA + P +++F ++KA +S + G +H G DS V V AL+ Y +
Sbjct: 2 VQAQ-VSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 127 IYDARKVFDELSLR-----------------------------VWNVAVWNTMVAGYAKV 157
I +AR+VFDE+S R V N A WN M+ GY+++
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
++ +A LF M +++ISWTT+IA Y+Q Q EA+ +F MQ + PDE+ M +
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
SACA LGA++LG+ IH Y + G + V + +ALIDMYAK G + K+L VF ++ K++
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
W ++I GLA+HG EAL MFSRM+R ++KPN +TFI++L AC H GLVE GR+ F M
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
+ I P+IE YGCM+DLLG+AG L++A +L+R M E N+ IWG+LL ++ ++++
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKI 360
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGCSYIEVS 456
+ A+ LEP+NSG Y +L N+YA + RW+E IR M+++GV+K PG S+IE+
Sbjct: 361 AQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEMD 420
Query: 457 KRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
+++H+F A D SH D +Y +L +++GQ+K + ++
Sbjct: 421 RKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGYV 456
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 53/284 (18%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
ID S L + A +F+ D+ + T I Q A+ ++N++Q + + PD
Sbjct: 114 IDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDE 173
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ ++ A L ++LG+EIH + G D DV++ +ALI MYA C + + VF
Sbjct: 174 VTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVF-- 231
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
LR N+ WN+++ G A + GYA+ EA+
Sbjct: 232 FKLRKKNLFCWNSIIEGLA--------------------------VHGYAE-----EALA 260
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGE----------WIHNYIEQYGLNTIVP 246
+F RMQ E +KP+ + ++ L AC G VE G I IE YG
Sbjct: 261 MFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYG------ 314
Query: 247 LNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
++D+ K+G + AL++ +M+ + + W ++ G LH
Sbjct: 315 ---CMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLH 355
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + ++ S ID + G D + +F K +++ +N+ I+ L A+ ++
Sbjct: 203 GFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMF 262
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYAS 123
+++Q ++P+ +F VL A +E GR+ + + ++ ++ +
Sbjct: 263 SRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGK 322
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF---ELMTEKNVISWTT 180
+ DA ++ + + N +W ++ G +L A+ +++ N +T
Sbjct: 323 AGLLEDALELVRSMRMEP-NSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTL 381
Query: 181 LIAGYAQMDQPNEAITL---FRRMQVENVKP 208
L+ YA++++ +E + + + VE P
Sbjct: 382 LVNMYAEVNRWSEVANIRATMKELGVEKTSP 412
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/493 (38%), Positives = 291/493 (59%), Gaps = 37/493 (7%)
Query: 1 MIVRGLDQNNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I++G + N L F + + G +YA+ +F ++PD++++NT ++ Q+ NP
Sbjct: 36 LIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPS 95
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
V+LY +++ ++PD ++F F+LK +L + G +H + + G + + V LI
Sbjct: 96 KVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLI 155
Query: 119 QMYASC-------KCIYD------------------------ARKVFDELSLRVWNVAVW 147
+++C YD AR++FDE+ ++ ++ W
Sbjct: 156 YFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQIFDEMPVK--DLVSW 213
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+ GY K G++ NAR LF+ EK+V++W T+IAGY + +A+ +F M+
Sbjct: 214 NVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGEC 273
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQ 266
PDE+ ML+ LSACA LG +++G +H I + + V L NAL+DMYAK G I ALQ
Sbjct: 274 PDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQ 333
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVG 325
VF+ M+ K V TW ++I GLA HG E++ +F+ M+ + +KPNEITF+ ++ AC H G
Sbjct: 334 VFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAG 393
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
VE GRRYF +M+ RY IEP + +GCM+DLLGRAG L EA +L+ +M E NA IW +L
Sbjct: 394 NVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTL 453
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L A ++G+VELG A + L+KL SG+Y +LSNIYA G W+ + ++RK+M D GV+
Sbjct: 454 LGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVR 513
Query: 446 KMPGCSYIEVSKR 458
K G S IE R
Sbjct: 514 KEAGRSLIEADDR 526
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 155/345 (44%), Gaps = 40/345 (11%)
Query: 120 MYASCKCIYDARKVFDELSLRVWN---VAVWNTMVAGYAKV-GDLNNARALFELMTEKNV 175
++ +C + +++ L ++ +N A+ + AG + G +N A +F +TE ++
Sbjct: 19 LWKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDI 78
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
W T++ G +Q P++ + L+ +M+ VKPD+ L C +L + G +H
Sbjct: 79 FMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGK 138
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ +YG + N LI ++ G + A +F ++ +SV++W+ + AG A G A
Sbjct: 139 VLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVA 198
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+F M VK + +++ +++ G +E R F+ E + + MI
Sbjct: 199 RQIFDEMP---VK-DLVSWNVMITGYVKNGEMENARTLFD-----EAPEKDVVTWNTMI- 248
Query: 356 LLGRAGYLQEAEKLLRRMPFE--------ANAAIWGSLLAASNIYGDVELGE---CALQH 404
AGY+ E+ FE + SLL+A GD+++G C++
Sbjct: 249 ----AGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISE 304
Query: 405 LIKLEPHNSGNYAI-----LSNIYAILGRWNESGKIRKVMRDMGV 444
+ + G+ ++ L ++YA G + ++ K MR+ V
Sbjct: 305 MTR------GDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDV 343
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 286/529 (54%), Gaps = 63/529 (11%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A + F P+V+LYNT I+A P A + +Q DN++FPF+LK
Sbjct: 71 ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTG 130
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC--------KCIY------------ 128
+ + +H Q G SDV V +LI Y+ C K ++
Sbjct: 131 NVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSW 190
Query: 129 --------------DARKVFDELSLR---VW--------------------------NVA 145
+ARKVFDE+ + W NV
Sbjct: 191 NSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVV 250
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
W+TMV GY K GD+ AR LF+ M KN++SWT +++G+A+ EAI+LF +M+
Sbjct: 251 SWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKAC 310
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+K D +++ L+ACA+ G + LGE IH I+ ++NAL+DMYAK G++ A
Sbjct: 311 LKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAY 370
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VF ++KNK V++W M+ GLA+HG G +AL++F RM+ PN++T I +L AC H G
Sbjct: 371 DVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAG 430
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
L++ G RYF+ M+ Y + P++E YGCM+DLLGR G L+EA +L+R MP NA IWG+L
Sbjct: 431 LIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTL 490
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L A ++ VEL L HL++LEP +SGN+++LSNIYA G WN R MR +G K
Sbjct: 491 LGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTK 550
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
K G S IEV+ VHEF D SHP D +YQ++ + ++K E N
Sbjct: 551 KPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELKQVECFSN 599
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 46/298 (15%)
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
K + + +++H Q + + L D+ VV LI ++ C+ + A F+++ NV ++
Sbjct: 29 KCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYP--NVHLY 86
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NTM I ++ QP++A F MQ +
Sbjct: 87 NTM-------------------------------IRAHSHNSQPSQAFATFFAMQRDGHY 115
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG--KAL 265
D L C + + E +H IE++G + V + N+LID Y+K G G A
Sbjct: 116 ADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAK 175
Query: 266 QVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F +M + V++W +MI+GLA GL EA +F M + + I++ +L V
Sbjct: 176 KLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMP----EKDGISWNTMLDGYVKV 231
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
G ++ + F+ M R + + M+ +AG ++ A L +MP + N W
Sbjct: 232 GKMDDAFKLFDEMPER-----NVVSWSTMVLGYCKAGDMEMARMLFDKMPVK-NLVSW 283
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 299/501 (59%), Gaps = 9/501 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+++ GL N L ++ + +S G D A +F P LYN+ I+A +
Sbjct: 103 IVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXX 162
Query: 61 VIL---YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
Y ++ L DN++ PFVLK+ LS + +GR +H Q + GL+ D +V A+L
Sbjct: 163 XXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASL 222
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY C I DARK+FD++ +R ++A WN ++AGY K G++ A LFE M +N++S
Sbjct: 223 IDMYVKCGVIGDARKLFDKMIVR--DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 280
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNY 235
WT +I+GY Q +A+ LF M + +KP+ + +++ L ACAQ A+E G IH++
Sbjct: 281 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF 340
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGR 293
GL+ + AL MYAK + +A F+ + K++I W TMI A HG G
Sbjct: 341 ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGV 400
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
EA+ +F M RA V+P+ +TF+ +LS C H GL++ G +FN M + + +EP++E Y C+
Sbjct: 401 EAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACV 460
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNS 413
+DLLGRAG L EA++L+ +MP +A ++WG+LLAA + ++E+ E A + L LEP NS
Sbjct: 461 VDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNS 520
Query: 414 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFD 473
GNY +LSN+YA G W E K+R +++ G+KK PGCS+IE++ + H F+ D SHP
Sbjct: 521 GNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAK 580
Query: 474 RLYQILCKINGQMKFAEHLQN 494
+Y+ L + ++K A ++ +
Sbjct: 581 EIYKFLEALPEKIKMAGYIPD 601
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
++LG+ H I +GL L ++ MYA SG + A+ VF+ + N S + + ++I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 286 LALHG---LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
HG L+ ++RM + + T +L +C + V +GR R G
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHG-QGLRVG 211
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
+E +ID+ + G + +A KL +M + A W +L+A G++ + E
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVAEDLF 270
Query: 403 QHLIKLEPHNSGNYAILSNIYAILGRWNES-GKIRKVMRDMG---------VKKMPGCSY 452
+ ++E N ++ + + Y G ++ G ++++D V +P C+
Sbjct: 271 E---RMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ 327
Query: 453 ---IEVSKRVHEFVAGDTSH 469
+E +R+H+F G H
Sbjct: 328 SAALERGRRIHDFANGIGLH 347
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/492 (38%), Positives = 300/492 (60%), Gaps = 9/492 (1%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL +N +LSR ++ C S G +A+ +F H P + ++NT IKAL LNA+
Sbjct: 32 GLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMIKALLLRGEFLNAIA 91
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
+++ I + + PD Y+ P+VLKA +++ I LG IH T+ G + V +L+ MY
Sbjct: 92 VFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYR 151
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
S + AR+VFDE+ + W M+ GYA +GD++ AR LF++ T K+ W +I
Sbjct: 152 SFDNMRSARQVFDEMP--ELSAVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMI 209
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+GY Q + E + +FR MQ+ V+PDE ++ LSACA +GA++ G WIH Y+ + GL
Sbjct: 210 SGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLP 269
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ ++ LIDMYAK G + A +F M + + W MI+G+A+ G G A+ +F M
Sbjct: 270 LTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEM 329
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
E+A +KP+ ITFIA+ AC + G+V+ G R +N M + + IEPK E YGC+IDLL R G
Sbjct: 330 EKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGR 389
Query: 363 LQEAEKLLRRMPFEAN----AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
+EAE +++R+P A+ A W + L+A +G + E A + L +LE H SG Y +
Sbjct: 390 FEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQLERH-SGAYVL 448
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSN+YA LG+ ++ ++R +M+ GV+K+PGCS I+V+ V+EF+AG+ +H D ++ +
Sbjct: 449 LSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLV 508
Query: 479 LCKINGQMKFAE 490
L ++N Q+ A+
Sbjct: 509 LEELNKQIVEAD 520
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/484 (39%), Positives = 273/484 (56%), Gaps = 65/484 (13%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC---KC---- 126
P SF +L++ +LG HCQ + G + D+ + L+ YA KC
Sbjct: 8 PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67
Query: 127 ------------------------IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+ +AR +FD ++ R N WN+M+ Y K+GD+N+
Sbjct: 68 FMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER--NSCSWNSMITCYCKLGDINS 125
Query: 163 ARALFE--------------------------------LMTEKNVISWTTLIAGYAQMDQ 190
AR +F+ + + +N ++W T+I+ Y Q +
Sbjct: 126 ARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGE 185
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
AI++F++MQ ENVKP E+ M++ LSACA LGA+++GEWIH YI L V L NA
Sbjct: 186 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 245
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LIDMY K G + A+ VF + K++ W ++I GL ++G G EA+ F ME+ +KP+
Sbjct: 246 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 305
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+TF+ ILS C H GL+ G+RYF+ M YG+EP +E YGCM+DLLGRAGYL+EA +L+
Sbjct: 306 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 365
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
R MP + N+ + GSLL A I+ D +LGE Q L++L+P + GNY LSN+YA L RW+
Sbjct: 366 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 425
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
+ RK+M GV K PGCS IEV+ VHEFVAGDTSHP F ++ L +I ++K
Sbjct: 426 DVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQG 485
Query: 491 HLQN 494
H+ N
Sbjct: 486 HVPN 489
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+NT I A Q A+ ++ ++Q+ ++P + +L A L +++G IH
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
L DV + ALI MY C + A VF LS + N+ WN+++ G G
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRK--NIFCWNSIIVGLGMNG----- 285
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+ EAI F M+ E +KPD + + LS C+
Sbjct: 286 --------------------------RGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHS 319
Query: 224 GAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
G + G+ + + YGL V ++D+ ++G + +AL++ M K
Sbjct: 320 GLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M +V P + + L +CA G +LGE H I + G + L L+D YAK G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ A +VF M + V+ MI+ L+ HG EA ++F M + N ++ ++++
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITC 116
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C +G + R F+ + + + +ID ++ L A++L M N+
Sbjct: 117 YCKLGDINSARLMFDCNPVK-----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSV 171
Query: 381 IWGSLLAA 388
W ++++A
Sbjct: 172 TWNTMISA 179
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/516 (37%), Positives = 298/516 (57%), Gaps = 63/516 (12%)
Query: 5 GLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
G Q+ L++F+ C+ S+G YA IF + P +++YN IKA + + AV+
Sbjct: 59 GFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVL 118
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+ +++ L PDN+++PFV KA+ L + G +++ V +GL+ D +V +L+ MYA
Sbjct: 119 LFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYA 178
Query: 123 SCKCIYDARKVFDELSLR---VWNVAV------------------------------WNT 149
+ + R+VF+E+ R WNV + W +
Sbjct: 179 EVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTS 238
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
MV+GY G L+ AR LFE ++V+ WT +I GY Q ++ ++A+ LFR MQ++ V PD
Sbjct: 239 MVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPD 298
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
++A L+ + ALI+MYAK G I K+L++F
Sbjct: 299 RFTLVALLTDAV-------------------------VGTALIEMYAKCGFIEKSLEIFN 333
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
+K K +WT++I GLA++G +AL++F+ M + VKP++ITFI +LSAC H GLVE
Sbjct: 334 GLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEE 393
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI---WGSLL 386
GR++F M + Y IEPK+E YGC+IDLLGRAG L EAE+L+ + P N I +G+LL
Sbjct: 394 GRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALL 453
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+A +G+VE+GE + L+ +E +S + +L+NIYA RW + K+R+ M+D+GVKK
Sbjct: 454 SACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKK 513
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
+PGCS +EV+ VHEF+ GD SHP+ +Y +L I
Sbjct: 514 VPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSI 549
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/477 (40%), Positives = 273/477 (57%), Gaps = 39/477 (8%)
Query: 6 LDQNNHL----LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
DQ++H + I +S G+ A +F DV +N I +T N A+
Sbjct: 146 FDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEAL 205
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++ + +RPD + V+ A + ++IELGR++H G S++ +V ALI +Y
Sbjct: 206 ELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 265
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G++ A LFE ++ K+VISW TL
Sbjct: 266 IKC---------------------------------GEVETACGLFEGLSYKDVISWNTL 292
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-- 239
I GY M+ EA+ LF+ M P+++ ML+ L ACA LGA+E+G WIH YI +
Sbjct: 293 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK 352
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G+ +LIDMYAK G I A QVF+++ N+S+ +W MI G A+HG A D+F
Sbjct: 353 GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIF 412
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
SRM + ++P++ITF+ +LSAC H G+++LGR F MK Y I PK+E YGCMIDLLG
Sbjct: 413 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGH 472
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+G +EAE+++ M E + IW SLL A ++G+VELGE Q+LIK+EP N G+Y +L
Sbjct: 473 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLL 532
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
SNIYA GRWNE KIR ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 533 SNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 225/391 (57%), Gaps = 10/391 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ I+ C D YA S+F +P++ ++NT + + +P
Sbjct: 10 MIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 69
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P+ Y+FPF+LK+ K G++IH + G D D++V +L
Sbjct: 70 VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 129
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY + DARKVFD+ S R +V + ++ GYA G + +A+ +F+ + K+V+S
Sbjct: 130 ISMYVQNGRLEDARKVFDQSSHR--DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVS 187
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W +I+GYA+ EA+ LF+ M NV+PDE M++ +SACAQ ++ELG +H++I+
Sbjct: 188 WNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWID 247
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + + NALID+Y K G++ A +FE + K VI+W T+I G L +EAL
Sbjct: 248 DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 307
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ PN++T ++IL AC H+G +E+GR + I K G+ +ID+
Sbjct: 308 LFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 367
Query: 357 LGRAGYLQEAEK----LLRRMPFEANAAIWG 383
+ G ++ A++ +L R NA I+G
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 398
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 142/324 (43%), Gaps = 63/324 (19%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R IH Q + TGL + + ++ LI+ C+ FD L +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEF-----CVLSPH--FDGLPYAI-------------- 42
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
++FE + E N++ W T+ G+A P A+ L+ M + P+
Sbjct: 43 ---------SVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPF 93
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN-- 273
L +CA+ A G+ IH ++ + G + + ++ +LI MY ++G++ A +VF+ +
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 274 -----------------------------KSVITWTTMIAGLALHGLGREALDMFSRMER 304
K V++W MI+G A G +EAL++F M +
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 213
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V+P+E T ++++SAC +ELGR+ + + +G ++ +IDL + G ++
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVE 272
Query: 365 EAEKLLRRMPFEANAAIWGSLLAA 388
A L + ++ + W +L+
Sbjct: 273 TACGLFEGLSYK-DVISWNTLIGG 295
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/513 (37%), Positives = 302/513 (58%), Gaps = 50/513 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIF------THKSKP--DVYLYNTTIKALCQT-D 55
GL N +L++F + S+L YA S T P D +L+NT I+A QT D
Sbjct: 45 GLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRD 104
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
+ N+ + Y + + P+ ++FPFVLK + ++ LG+ +H V G + DVHV+
Sbjct: 105 SKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLN 164
Query: 116 ALIQMYASCKCIYD-----ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
LI MY C+ + A KVFD+ + W+ M+AG+ ++G
Sbjct: 165 TLIHMYC---CLGEDGFEFAEKVFDDSP--KMDTVTWSAMIAGFVRLG------------ 207
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
+ A+ LFR MQV V PDEI M++ LSACA LGA+ELG+
Sbjct: 208 -------------------CSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGK 248
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
W+ +Y+E+ + V L NALIDM+AK G + KA+++F M ++++++WT++IAGLA+HG
Sbjct: 249 WVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHG 308
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
G +A+ +F M + P+++ FI +LSAC H GLV+ GR YF M+ + I PK+E Y
Sbjct: 309 RGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHY 368
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GCM+DLL R G+++EA + +++MPFE N IW +++ A + G+++LGE + LIK EP
Sbjct: 369 GCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEP 428
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+ NY +LSNIYA L +W + K+R++M G+KK+PG + IEV+ ++EFVAGD SH
Sbjct: 429 MHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHD 488
Query: 471 DFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+ +Y+++ ++ ++K A ++ +L+ D
Sbjct: 489 QYKEIYEMVDEMGREIKKAGYVPTTSQVLLDID 521
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 302/562 (53%), Gaps = 72/562 (12%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I+ L ++++ I+S S DYA +F +PD ++YN I+A + P A+
Sbjct: 30 IISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAI 89
Query: 62 ILYNKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLD------------ 108
+YNK++A + D Y++PFV KA +E G+E+H V G +
Sbjct: 90 SIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNF 149
Query: 109 -------------------SDVHVVAALIQMYASCKCIYDARKVFDEL------------ 137
DV ALI YA + D+ VF E+
Sbjct: 150 YMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGT 209
Query: 138 ------------SLRVW---------------NVAVWNTMVAGYAKVGDLNNARALFELM 170
+L++ V + ++ Y K G L+ AR LF+ +
Sbjct: 210 MMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEI 269
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
EKN + W +LI GY Q+ NE I L R M + N+KPD + LSACAQ+GA LG
Sbjct: 270 PEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGN 329
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
W+H + E+ G+ + + ALIDMYAK G IG A +VF+ M ++V TW +++G A HG
Sbjct: 330 WVHRFAEKKGIWDVF-IGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHG 388
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
A+++FS M + +P+ ITF+A+L AC H GLVE G++YF++M Y I P++E Y
Sbjct: 389 QAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHY 448
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GCM+DLLGRAG LQEA +L++ M E N +WG+LL+A +I+G++E+GE A H+IKL
Sbjct: 449 GCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNA 508
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+ G+Y IL+N+YA R+N +R++M + G+ K GCS IE+ VHEFV D HP
Sbjct: 509 MDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHP 568
Query: 471 DFDRLYQILCKINGQMKFAEHL 492
+ +Y +L +++ ++K A ++
Sbjct: 569 RSEEIYSVLDELSKKLKMAGYV 590
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 275/449 (61%), Gaps = 5/449 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI-L 63
GL Q+N +L+ F+ C+SL YA +F H P++ L+N IKA P +A
Sbjct: 35 GLQQSNQILAHFVSVCASLRRVPYATRLFAHTHNPNILLFNAIIKAH-SLHPPFHASFSF 93
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++ ++ A+ PD Y+ + K+ L LG +H V G V A +++YAS
Sbjct: 94 FSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCVHAHVVRLGFTRHASVRVAALEVYAS 153
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C+ + DA KVFDE+ R +V VWN M+ G+ K+GDL +F M E+ V+SW +++
Sbjct: 154 CERMGDASKVFDEM--RDPDVVVWNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLMMS 211
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LN 242
A+ ++ +A+ LF M + +PD+ +++ L CA+LGAV++GEWIH+Y G L
Sbjct: 212 CLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQ 271
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + N+L+D Y K G + A +F +M +K+V++W MI+GLA +G G +++F M
Sbjct: 272 DTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEEM 331
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+PN+ TF+ +L+ C HVGLV+ GR F M ++ + PK+E YGC++DLLGR G+
Sbjct: 332 VHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSPKLEHYGCVVDLLGRCGH 391
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
++EA L+ MP + AA+WG+LL+A YGD E+ E A + L++LEP NSGNY +LSN+
Sbjct: 392 VREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKELVRLEPWNSGNYVLLSNV 451
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCS 451
YA GRW+E K+R +MR GVKK+PG S
Sbjct: 452 YAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 26/179 (14%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + ++GL + + + A ++ A ++F + N +++ + +I +LH
Sbjct: 27 IHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFAHTHNPNILLFNAIIKAHSLHPP 86
Query: 292 GREALDMFSRMERARVKPNEITFIA-----------ILSACCHVGLVELG-RRYFNIMKS 339
+ FS M+ + P+E T +L C H +V LG R+ ++ +
Sbjct: 87 FHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCVHAHVVRLGFTRHASVRVA 146
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+ E+ G +A K+ M + + +W ++ GD+E G
Sbjct: 147 ALEVYASCERMG-------------DASKVFDEMR-DPDVVVWNLMIRGFCKMGDLETG 191
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 294/523 (56%), Gaps = 32/523 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI QN +L+++FI +CSS D A S T KP+V++YN IK +P+ +
Sbjct: 803 MIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRS 862
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y ++ ++ P +Y++ +++A S + H G G V + LI
Sbjct: 863 LEFYVRMLRDSVSPSSYTYSSLVQASAFASGFGESLQAHIWKFGFGF--HVQIQTTLIGF 920
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTMV 151
Y++ I +ARKVFDE+ R W N A WN ++
Sbjct: 921 YSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLI 980
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
GY ++G+L A +LF M K++ISWTT+I GY++ + EAI +F +M E + PDE+
Sbjct: 981 DGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEV 1040
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL VF N+
Sbjct: 1041 TMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 1100
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLVE GR
Sbjct: 1101 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGR 1160
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
R + M Y I +E YGCM+ L +AG + EA +L+ M FE NA IWG+LL I
Sbjct: 1161 RIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRI 1220
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGC 450
+ ++E+ E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+ PG
Sbjct: 1221 HKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 1280
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 1281 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYEQMGLAGYVQ 1323
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/477 (40%), Positives = 272/477 (57%), Gaps = 39/477 (8%)
Query: 6 LDQNNHL----LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
DQ++H + I +S G+ A +F DV +N I +T N A+
Sbjct: 161 FDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEAL 220
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++ + +RPD + V+ A + ++IELGR++H G S++ +V ALI +Y
Sbjct: 221 ELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 280
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G++ A LFE ++ K+VISW TL
Sbjct: 281 IKC---------------------------------GEVETACGLFEGLSYKDVISWNTL 307
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-- 239
I GY M+ EA+ LF+ M P+++ ML+ L ACA LGA+E+G WIH YI +
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK 367
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G+ +LIDMYAK G I A QVF+++ N+S+ +W MI G A+HG A D+F
Sbjct: 368 GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIF 427
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
SRM + ++P++ITF+ +LSAC H G+++LGR F MK Y I PK+E YGCMIDLLG
Sbjct: 428 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGH 487
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+G +EAE+++ M E + IW SLL A +Y +VELGE Q+LIK+EP N G+Y +L
Sbjct: 488 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLL 547
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
SNIYA GRWNE KIR ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 548 SNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 225/391 (57%), Gaps = 10/391 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ I+ C D YA S+F +P++ ++NT + + +P
Sbjct: 25 MIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P+ Y+FPF+LK+ K G++IH + G D D++V +L
Sbjct: 85 VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 144
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY + DARKVFD+ S R +V + ++ GYA G + +A+ +F+ + K+V+S
Sbjct: 145 ISMYVQNGRLEDARKVFDQSSHR--DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVS 202
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W +I+GYA+ EA+ LF+ M NV+PDE M++ +SACAQ ++ELG +H++I+
Sbjct: 203 WNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWID 262
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + + NALID+Y K G++ A +FE + K VI+W T+I G L +EAL
Sbjct: 263 DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 322
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ PN++T ++IL AC H+G +E+GR + I K G+ +ID+
Sbjct: 323 LFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 382
Query: 357 LGRAGYLQEAEK----LLRRMPFEANAAIWG 383
+ G ++ A++ +L R NA I+G
Sbjct: 383 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 413
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 145/329 (44%), Gaps = 63/329 (19%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
T++ R IH Q + TGL + + ++ LI+ C+ FD L +
Sbjct: 14 TLQSLRMIHAQMIKTGLHNTNYALSKLIEF-----CVLSPH--FDGLPYAI--------- 57
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++FE + E N++ W T+ G+A P A+ L+ M + P+
Sbjct: 58 --------------SVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNC 103
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
L +CA+ A G+ IH ++ + G + + ++ +LI MY ++G++ A +VF+
Sbjct: 104 YTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQ 163
Query: 271 MKN-------------------------------KSVITWTTMIAGLALHGLGREALDMF 299
+ K V++W MI+G A G +EAL++F
Sbjct: 164 SSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELF 223
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + V+P+E T ++++SAC +ELGR+ + + +G ++ +IDL +
Sbjct: 224 KEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIK 282
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G ++ A L + ++ + W +L+
Sbjct: 283 CGEVETACGLFEGLSYK-DVISWNTLIGG 310
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/510 (37%), Positives = 292/510 (57%), Gaps = 48/510 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL + SR I + + F DYA +F P++Y +NT I+A + NP
Sbjct: 58 MLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPH 117
Query: 59 NAVILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+++++ + + S PD ++FPF++KA +L + G+ H + L SDV ++ +L
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I YA C + +VF R +V WN+M+ + + G
Sbjct: 178 IHFYAKCGELGLGYRVFVNXPRR--DVVSWNSMITAFVQGG------------------- 216
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
P EA+ LF+ M+ +NVKP+ I M+ LSACA+ E G W+H+YIE
Sbjct: 217 ------------CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA------------G 285
+ + + L+NA++DMY K G + A ++F+ M K +++WTTM+ G
Sbjct: 265 RNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQG 324
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
LA+HG G++A+ +FS+M+ +VKPN +TF IL AC HVGLVE GR +FN M+ YG+ P
Sbjct: 325 LAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLP 384
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
++ Y CM+D+LGRAG L+EA +L+ +MP A++WG+LL A I+ +V L E A L
Sbjct: 385 GVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQL 444
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
I+LEP N G Y +LSNIYA G+W+ +RK+MRD+G+KK PGCS IEV VHEF+ G
Sbjct: 445 IELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 504
Query: 466 DTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
D SHP ++Y L +I +++ ++ N+
Sbjct: 505 DNSHPSAKKIYAKLDEIVARLETIGYVPNK 534
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 301/508 (59%), Gaps = 37/508 (7%)
Query: 19 SCSSLGFSDYAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKI--QASALRPD 75
S +LG +YA +F P + ++Y T IKA NP A Y+++ + P+
Sbjct: 75 SFDNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPN 134
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA------------- 122
+++F +V A K + + G++ H Q + + VH +L+ Y
Sbjct: 135 DFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVF 194
Query: 123 ---------SCKCIY----------DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
S C+ +AR++FDE+ R +V W M+ GYA G L+ A
Sbjct: 195 DKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPER--DVVSWTIMLVGYADAGFLSEA 252
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
LF+ M ++N++SW+ LI GY Q+ ++A+ LF+ MQV VK DE+ + LSACA+L
Sbjct: 253 SCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARL 312
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
GA++ G W+H YI+++G+ L+ ALIDMY+K G+I A +VF+ +K V W++MI
Sbjct: 313 GALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMI 372
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
GLA+H G +A+++F++M ++P+EIT+I IL+AC H GLV++G + FN M
Sbjct: 373 GGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKP 432
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
+P+++ YGC++DLLGRAG L +A +++ MP +A+ AIW +LL+A ++ +VELGE +
Sbjct: 433 KPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGR 492
Query: 404 HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFV 463
LIK+EP N NY + SN+YA + RW+ SGK+R+ M+ G++K PGCS IE++ VHEFV
Sbjct: 493 ILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFV 552
Query: 464 AGDTSHPDFDRLYQILCKINGQMKFAEH 491
+ D SHP +Y++L + M +H
Sbjct: 553 SRDHSHPQSQVIYELLHILTNHMVQEDH 580
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 71/323 (21%)
Query: 152 AGYAKVGDLNNARALFELM-TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKP 208
A + +G LN A+ LF+ + +N +TT+I YA P EA + RM + V P
Sbjct: 74 ASFDNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYP 133
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG------ 262
++ SAC++ V G+ H + ++ V N+L+D Y K G++G
Sbjct: 134 NDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRV 193
Query: 263 --------------------------KALQVFENMKNKSVITWTTMIAGLALHGLGRE-- 294
+A ++F+ M + V++WT M+ G A G E
Sbjct: 194 FDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEAS 253
Query: 295 -----------------------------ALDMFSRMERARVKPNEITFIAILSACCHVG 325
AL++F M+ A+VK +E+ +LSAC +G
Sbjct: 254 CLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLG 313
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
++ G R+ ++ ++GI+ +ID+ + G + A K+ + + +W S+
Sbjct: 314 ALDQG-RWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETG-DKKVFVWSSM 371
Query: 386 LAASNIYGDVELGECALQHLIKL 408
+ ++ GE A++ K+
Sbjct: 372 IGGLAMHS---FGEKAIELFAKM 391
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/415 (43%), Positives = 252/415 (60%), Gaps = 1/415 (0%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
PDNYSFPFVLKA +LS + GREIH T+ G+ DV V ALI ++SC + AR V
Sbjct: 8 PDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAV 67
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
FD L V +V WN+M++GY + A +F+ + +N + WT++IAGYAQ D E
Sbjct: 68 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 127
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
AI LFR MQ+ D + LSAC GA+ G WIH Y E+ + + NALI
Sbjct: 128 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIG 187
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEI 312
MY+K G I KAL++F + + +W+ +I+GLA++G +AL +FS+ME + ++PNEI
Sbjct: 188 MYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEI 247
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +L AC H G V+ G YFN M Y + P IE YGCM+DLLGRA L EAEK +R
Sbjct: 248 TFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRT 307
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
+P + + IW SLL A +G++EL E A + + +LEP G +LSN+YA RW +
Sbjct: 308 LPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDV 367
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++RK M +KK PGCS++E+ VHE D SHP+ +Y+ + IN ++
Sbjct: 368 KRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQ 422
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+VR + N ++S ++ S + A +F + + + I Q+D A+
Sbjct: 74 LVRDVVSWNSMISGYLQSHRY----ELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAI 129
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++Q D + VL A + GR IH ++ D++ ALI MY
Sbjct: 130 ELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMY 189
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ C GD+ A +F +T+ ++ SW+ +
Sbjct: 190 SKC---------------------------------GDIQKALEIFHGLTQPDIFSWSAV 216
Query: 182 IAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-Y 239
I+G A + ++A+ LF +M+ + +++P+EI L L AC G V+ G + N + Q Y
Sbjct: 217 ISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIY 276
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
L + ++D+ ++ + +A + + V+ W +++ HG
Sbjct: 277 NLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHG 328
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/480 (40%), Positives = 285/480 (59%), Gaps = 44/480 (9%)
Query: 35 HKSKPDV--YLYNTTIKA----LCQTDNPLNAVI-LYNKIQASALRPDNYSFPFVLKAVV 87
H S P + +L+NT I+A Q P ++ I ++ +++ ++PD ++FPF+L++
Sbjct: 16 HFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFA 75
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
S + LGR +H Q + GL D V +LI MY+S
Sbjct: 76 SPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSS----------------------- 112
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ---VE 204
G ++ AR LF +M E+NVISW+ +I GY + Q EA+ LFR MQ V
Sbjct: 113 ----------GLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 162
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+V+P+E M L+AC +LGA+E G+W H YI++ G+ V L ALIDMYAK G + KA
Sbjct: 163 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 222
Query: 265 LQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
VF N+ NK V+ W+ MI+GLA+HGL E + +FS+M V+PN +TF+A+ AC H
Sbjct: 223 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 282
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV G+ Y M Y I P I+ YGCM+DL GRAG ++EA +++ MP E + +WG
Sbjct: 283 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 342
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL+ S ++GD+E E AL+ LI+LEP NSG Y +LSN+YA GRW + +R +M MG
Sbjct: 343 ALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 402
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+KK+PGCS IEV +HEF GD SHP+ +++ +L +I ++K ++ N +L+ D
Sbjct: 403 IKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLD 462
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/463 (40%), Positives = 267/463 (57%), Gaps = 35/463 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I +S G + A+ +F DV +N I +T N A+ L+ K+ + +RPD
Sbjct: 175 LITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPD 234
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ VL A + +IELGR++H G ++ +V ALI +Y+
Sbjct: 235 ESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYS------------- 281
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
K G+L A LF+ ++ K+VISW TLI GY M+ EA+
Sbjct: 282 --------------------KCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEAL 321
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALID 253
LF+ M KP+++ ML+ LSACA LGA+++G WIH YI++ G+ L +LID
Sbjct: 322 LLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 381
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G I A QVF++M N+S+ +W MI G A+HG A D+FSRM + ++P++IT
Sbjct: 382 MYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 441
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ +LSAC H G+++LGR F M Y + PK+E YGCMIDL G +G +EAEK++ M
Sbjct: 442 FVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTM 501
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
E + IW SLL A ++G+VELGE Q+LIK+EP N G+Y +LSNIYA RWNE
Sbjct: 502 EMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVA 561
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
K R ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 562 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 230/397 (57%), Gaps = 7/397 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ ++ C D YA S+F +P + ++NT + + +P
Sbjct: 25 MIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDP 84
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P++Y+FPF+LK+ K + G+++H Q + G D D+++ +L
Sbjct: 85 VSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSL 144
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY + DA+KV D+ S R +V + ++ GYA G + +A +F+ + K+V+S
Sbjct: 145 ISMYVQNGRLEDAQKVXDKSSHR--DVVSYTALITGYASRGXIESAHKMFDEIPVKDVVS 202
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W I+GYA+ EA+ LF++M NV+PDE M+ LSACAQ G++ELG +H++I
Sbjct: 203 WNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIN 262
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + NALID+Y+K G++ A +F+ + NK VI+W T+I G L +EAL
Sbjct: 263 DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALL 322
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ KPN++T ++ILSAC H+G +++GR + I K G+ +ID+
Sbjct: 323 LFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 382
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ G ++ A+++ M + + W +++ ++G
Sbjct: 383 YAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHG 418
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 184/423 (43%), Gaps = 91/423 (21%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
T++ R IH Q + TGL + + ++ L++ C+ FD L +
Sbjct: 14 TLQSLRIIHAQMIKTGLHNTNYALSKLLEX-----CVLSPH--FDGLPYAI--------- 57
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++F+ + E ++ W T+ G+A P A+ L+ M + P+
Sbjct: 58 --------------SVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNS 103
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV--- 267
L +CA+ A + G+ +H + ++G + + ++ +LI MY ++G++ A +V
Sbjct: 104 YTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDK 163
Query: 268 ----------------------------FENMKNKSVITWTTMIAGLALHGLGREALDMF 299
F+ + K V++W I+G A G +EAL++F
Sbjct: 164 SSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELF 223
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M + V+P+E T + +LSAC G +ELGR+ + + +G ++ +IDL +
Sbjct: 224 KKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIND-HGFGXNLKIVNALIDLYSK 282
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA---SNIYGDVELGECALQHLIKL--EPHNSG 414
G L+ A L + + + W +L+ N+Y + L Q +++ +P++
Sbjct: 283 CGELETACGLFQGLS-NKDVISWNTLIGGYTHMNLYKEALL---LFQDMLRSGEKPNDVT 338
Query: 415 NYAILS---NIYAI-LGRW------------NESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
+ILS ++ AI +GRW + +R + DM K C IE +++
Sbjct: 339 MLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK----CGDIEAAQQ 394
Query: 459 VHE 461
V +
Sbjct: 395 VFD 397
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/458 (40%), Positives = 282/458 (61%), Gaps = 17/458 (3%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE----I 98
L++ I+A + P A+ LY + + L P ++ P +LK++ + R +
Sbjct: 55 LHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAV 114
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW---NVAVWNTMVAGYA 155
H V GL + V ALI+++A R L LR + + +NT++ +A
Sbjct: 115 HAHAVRLGLAGFLLVNNALIRVHAGLL----GRLADAHLLLRTSAAVDASTFNTLITAHA 170
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+ G + +AR+LF+ M E+N +SW+ ++ GY Q EA+ +F +MQ + V+PD+ ++
Sbjct: 171 RAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVG 230
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L+ACAQLGA+E G+W+H Y++ + V L AL+DMYAK G++ ++VFE MK+K+
Sbjct: 231 VLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKN 290
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V+ WTTMI GLA+HG G ++L +FS+ME + VKP++I FI L AC H GLV+ GR FN
Sbjct: 291 VLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFN 350
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
M + YGI+PKIE YGCM+DLL R G L EA ++ +MP + +A IWG+L+A + +V
Sbjct: 351 SMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNV 410
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
EL E ++H I+LEP SG Y +L NIY+ GR + +IR +MR+ GV+K PGCS +E+
Sbjct: 411 ELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEI 470
Query: 456 SKRVHEFVAGDTSHPDFDRLYQILCK---INGQMKFAE 490
+H+F+ GD SHP R+ IL K I+ +++ E
Sbjct: 471 KGVIHQFIVGDLSHP---RIKDILTKWYEIDSRIRLEE 505
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F + + ++ + Q + A+ +++++QA +RPD+ VL A +
Sbjct: 178 ARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQ 237
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L +E G+ +H + V + AL+ MYA C + +VF+ ++ NV W
Sbjct: 238 LGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFE--GMKDKNVLAWT 295
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ G A G + ++++TLF +M+ VKP
Sbjct: 296 TMIKGLAMHG-------------------------------RGSDSLTLFSQMESSGVKP 324
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D+IA + AL AC G V+ G E ++ + YG+ + ++D+ A++G + +A +
Sbjct: 325 DDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDM 384
Query: 268 FENMKNK-SVITWTTMIAGLALH 289
E M K + W ++AG H
Sbjct: 385 VEKMPMKPDALIWGALMAGCRFH 407
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/139 (18%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D + G +F +V + T IK L +++ L++++++S ++PD
Sbjct: 266 LVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPD 325
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDARKVF 134
+ +F L A ++ GRE+ V G+ + ++ + A + +AR +
Sbjct: 326 DIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMV 385
Query: 135 DELSLRVWNVAVWNTMVAG 153
+++ ++ + +W ++AG
Sbjct: 386 EKMPMKP-DALIWGALMAG 403
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/463 (39%), Positives = 281/463 (60%), Gaps = 4/463 (0%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPDNYSFPFVLKA 85
D A +F + DV + T + + A L+ + + +RP+ + + A
Sbjct: 195 DDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSA 254
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ ++ + G +H G+ V++ AL+ M+ C C+ AR+VFD + ++ +V
Sbjct: 255 IGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVK--DVY 312
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
W +MV YAK GDL +A LF+ M +NV+SW+ +IA Y+Q++QP EA+ LFR M
Sbjct: 313 SWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAG 372
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
V P + +++ LSACAQLG ++LG WI+ NYI + V L NALIDM+AK G +G+A
Sbjct: 373 VDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEA 432
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F+ M ++V++W TMI A+HG EA+ +F +++ + P++ITF+ +L++C H
Sbjct: 433 SKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHS 492
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV GRRYF M+ Y IEP++E Y CMIDLLG+ G L+EA ++ R MP EA+ A WG+
Sbjct: 493 GLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGA 552
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A ++G+VE+G C L++L+P +SG Y ++S IYA +W++ +R MRD GV
Sbjct: 553 LLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGV 612
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
KK PGCS IEV + H+F+ D SH + +Y L I +K
Sbjct: 613 KKNPGCSSIEVEGKFHDFLVADVSHACSEEIYSALKNIYFHLK 655
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 75/398 (18%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKL------STI 92
P+ Y+ T ++ + P A+ L+ ++ L D +F F +KA T
Sbjct: 99 PNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTP 158
Query: 93 ELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVA 152
G IHC A+ KC + V V N +V
Sbjct: 159 SGGEAIHC---------------------AALKCGFVGESVL-----------VGNALVH 186
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEI 211
YA L++A +F+ M E++V+SWTTL+ GYA+ +EA LF RM V ++P+ +
Sbjct: 187 FYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAV 246
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM----------------- 254
++AA+SA Q+G + G +H Y+ + G+ V L+NAL+DM
Sbjct: 247 TLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGM 306
Query: 255 --------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
YAK G + A Q+F++M ++V++W+ MIA + EA+ +F
Sbjct: 307 EVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFR 366
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFN--IMKSRYGIEPKIEQYGCMIDLLG 358
M A V P + T +++LSAC +G ++LGR + I+ ++ G+ + +ID+
Sbjct: 367 EMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGL--TVNLGNALIDMFA 424
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G + EA KL M E N W +++ A ++G E
Sbjct: 425 KCGDVGEASKLFDEMA-ERNVVSWNTMIMAHAVHGQSE 461
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/467 (39%), Positives = 280/467 (59%), Gaps = 16/467 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +GL Q++ ++S+F+ C+SL Y S+F S P L+NT IK + +
Sbjct: 96 IIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLT 155
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ +++ S PD +++P ++KA K+ ++ G H V G+ DV V+ +LI +
Sbjct: 156 VSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDL 215
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C I ARKVFDE+ R NV W M+AGYA DL AR LF+ M EKN +SW
Sbjct: 216 YGKCGEILCARKVFDEMGER--NVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNA 273
Query: 181 LIAGYAQMDQPNEAITLFRRMQVEN-------------VKPDEIAMLAALSACAQLGAVE 227
+I+GY + A +F M N VKPDE M++ +SAC+Q+G++E
Sbjct: 274 IISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQMGSLE 333
Query: 228 LGEWIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 286
L +W+ +Y+ + ++ + ALIDM AK G + +A ++FE M + +I++ +M+ GL
Sbjct: 334 LAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGL 393
Query: 287 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
++HG G +A+ +FSRM + P+++ F IL+AC GLV+ G YF MK+ Y I P
Sbjct: 394 SIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPS 453
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
+ Y CM+DLLGRAG L+EA +LL+ MP E +A WG+LL A ++ D+ELGE L
Sbjct: 454 PDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLF 513
Query: 407 KLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
+LEP N+GNY +LSNIYA +W + +R MR+ G++K+PGCS+I
Sbjct: 514 ELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 291/504 (57%), Gaps = 39/504 (7%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S+ G + A IF + +V +N I++ + + A+ ++ + + A PD+Y+FP
Sbjct: 82 SAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFP 141
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VLKA L + +G ++H V GLD+++ + AL+ MY C C+ +ARKV D++ R
Sbjct: 142 CVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR 201
Query: 141 VWNVAVWNTMVAGYAKVGDLNNA------------------------------------- 163
+V WN+MVAGYA+ G ++A
Sbjct: 202 --DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYI 259
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+FE MT+KN+ISW +IA Y PNEA++LF +M+ +KPD + + + L AC L
Sbjct: 260 HNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDL 319
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
A+ LG +H YIE+ L + L NAL+DMYAK G + +A VF+ M+ + V++WT+M+
Sbjct: 320 SALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMM 379
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
+ G G +A+ +F++M + P+ I F+++LSAC H GL++ GR YF +M +YGI
Sbjct: 380 SAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGI 439
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
P+IE + CM+DL GRAG ++EA +++MP E N +WG+LL+A ++ +++G A
Sbjct: 440 VPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAAD 499
Query: 404 HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFV 463
L +L P SG Y +LSNIYA G W + +R M+ +G+KK+PG S +E++ +VH F+
Sbjct: 500 LLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFL 559
Query: 464 AGDTSHPDFDRLYQILCKINGQMK 487
AGD HP +Y L + G+MK
Sbjct: 560 AGDQYHPQAKNIYGELDVLVGKMK 583
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 9/296 (3%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++ Y+ G+ + AR +F+ EKNV+ + +I Y + EA+++F+ M PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
L AC+ L + +G +H+ I + GL+T + + NAL+ MY K G + +A +V +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M + V++W +M+AG A G +AL++ M+ + + T ++ C+ L +
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLL 386
+Y + M R + + + MI + EA L +M + +A SLL
Sbjct: 257 --QYIHNMFERM-TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 387 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
A + LG +++ K L+P+ A+L ++YA G E+ + MR
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLQPNLLLENALL-DMYAKCGCLEEARDVFDKMR 368
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 295/505 (58%), Gaps = 34/505 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ L ++ + ++ I S S +++ ++F H +++ +N I+ L + NA
Sbjct: 104 IIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNA 163
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ + + S ++PD ++PFVLK++ L + ELG IHC + G++ D V +L+ M
Sbjct: 164 IFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDM 223
Query: 121 YASCKCIYDARKVFDELSLR--------VWNVAV-------------------------- 146
Y + + A KVFDE R +WNV +
Sbjct: 224 YVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVS 283
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W+T++ G+AK GD++ A LF+ M EKNV+SWTT++ G+++ +A+++F +M E V
Sbjct: 284 WSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGV 343
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+P+ +++ALSACA++G +E G IH YI+ GL+ L AL+DMYAK G I A +
Sbjct: 344 RPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASE 403
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF + KS+ TWT MI G A+HG +A+ F +M A +KP+E+ F+A+L+AC H G
Sbjct: 404 VFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQ 463
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V++G +F+ M+ Y IEP ++ Y ++D+LGR+G L+EA + + RMP + IWG+L
Sbjct: 464 VDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALF 523
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A + ++ + AL L+KLEP ++GNY LSN YA LG+W ++ ++R +M++ GV K
Sbjct: 524 CACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHK 583
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPD 471
G S IEV +VH FV+GD H D
Sbjct: 584 NSGWSCIEVEGQVHRFVSGDHDHKD 608
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 117/285 (41%), Gaps = 52/285 (18%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH I + L++ + LI + I +L VF + K K++ T+ +I GL +
Sbjct: 100 IHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSH 159
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE------- 344
A+ F M R+ +KP+ +T+ +L + + ELG + M R GIE
Sbjct: 160 FFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMA-IHCMILRCGIELDSFVRV 218
Query: 345 ------PKIEQYGCMIDLLG-----------------------RAGYLQEAEKLLRRMPF 375
K+E+ G + +AG +++A KL + MP
Sbjct: 219 SLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK 278
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ N + W +L+ GD++ A++ ++ N ++ + + ++ G ++ +
Sbjct: 279 KENVS-WSTLIDGFAKNGDMDR---AMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSM 334
Query: 436 RKVMRDMGVKK--------MPGCSYI---EVSKRVHEFVAGDTSH 469
M + GV+ + C+ I E R+H+++ + H
Sbjct: 335 FSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLH 379
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 306/523 (58%), Gaps = 32/523 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I + + ++++ + S G +DYA+ +F ++P+ YL+ + I + A
Sbjct: 26 LIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEA 85
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L+ +++ + N++ VLKA+ +L+ + G+ ++ + D+ +I
Sbjct: 86 FSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMISG 145
Query: 121 YASCKCIYDARKVFDEL-----------------------------SLRVWNVAVWNTMV 151
Y + + ARK FD + S+ V ++A WN MV
Sbjct: 146 YGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMV 205
Query: 152 AGYAKVGDLNN-ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+GY +GD N AR LF+ M KN+++W+T+I GYA+ QP +A+ LF R + +++KPDE
Sbjct: 206 SGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDE 265
Query: 211 IAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+L +SAC+QLG ++ E IHNY+ L+ + + +LIDMYAK G I KALQ+FE
Sbjct: 266 TFILGIISACSQLGIIDAAESIIHNYVGPSLLSDL-RVFTSLIDMYAKCGSIEKALQMFE 324
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
K ++ ++TMIA LA HGLGR+A+ +F +M+RA +KP+ +TF+ +L+AC H GLV+
Sbjct: 325 MAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDE 384
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
GR+YF M +GI+P + Y C++DLLGR G L+EA L+R MP ++ +WG+LLAA
Sbjct: 385 GRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAAC 444
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
++ +V+L E A L K+EP NSGNY +LSNIYA GRW K+R +R+ V+K G
Sbjct: 445 RVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRG 504
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
S+IE+S VHEFV GD SH D D + IL + MK + +L
Sbjct: 505 SSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMKLSGYL 547
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 289/497 (58%), Gaps = 41/497 (8%)
Query: 1 MIVRGLDQNNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++RG + L F + + G +AY +F +PD+++YNT I+ T P
Sbjct: 31 MVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFMYNTLIRGAAHTAAPR 90
Query: 59 NAVILYNKI----QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
+AV LY ++ +RPD +FPFVL+A + G ++H V G +SD V
Sbjct: 91 DAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAHVVKAGCESDAFVR 150
Query: 115 AALIQMYASC------KCIYD-------------------------ARKVFDELSLRVWN 143
ALI M+ASC ++D ARK+FDE ++ +
Sbjct: 151 NALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVAARKLFDECPVK--D 208
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN M+ YAK G++ AR LF + E++V+SW +I+G+ + A+ LF +MQ
Sbjct: 209 HVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGHVRCGSHVYAMELFEQMQR 268
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT--IVPLNNALIDMYAKSGKI 261
KPD + ML+ LSACA G +++G +H+ + + L T V L NALIDMYAK G +
Sbjct: 269 MGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRTGFTVILGNALIDMYAKCGSM 328
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
ALQVF M++K V TW ++I GLALHG E++D+F +M + +V+P+EITF+A+L AC
Sbjct: 329 KSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIAC 388
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H G+V+ GR YFN+M+ Y IEP ++ YGCM+D+LGRAG L+EA + + M E N+ I
Sbjct: 389 SHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVEPNSVI 448
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W +LL A ++G++EL E A + L+K SG+Y +LSNIYA G W+ES K+RK+M D
Sbjct: 449 WRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLLSNIYASAGEWSESEKMRKLMDD 508
Query: 442 MGVKKMPGCSYIEVSKR 458
GV K G + ++ S +
Sbjct: 509 SGVNKQAGRTVVDGSAK 525
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 291/504 (57%), Gaps = 39/504 (7%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S+ G + A IF + +V +N I++ + + A+ ++ + + A PD+Y+FP
Sbjct: 82 SAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFP 141
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VLKA L + +G ++H V GLD+++ + AL+ MY C C+ +ARKV D++ R
Sbjct: 142 CVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR 201
Query: 141 VWNVAVWNTMVAGYAKVGDLNNA------------------------------------- 163
+V WN+MVAGYA+ G ++A
Sbjct: 202 --DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYI 259
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+FE MT+KN+ISW +IA Y PNEA++LF +M+ +KPD + + + L AC L
Sbjct: 260 HNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDL 319
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
A+ LG +H YIE+ L + L NAL+DMYAK G + +A VF+ M+ + V++WT+M+
Sbjct: 320 SALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMM 379
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
+ G G +A+ +F++M + P+ I F+++LSAC H GL++ GR YF +M +YGI
Sbjct: 380 SAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGI 439
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
P+IE + CM+DL GRAG ++EA +++MP E N +WG+LL+A ++ +++G A
Sbjct: 440 VPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAAD 499
Query: 404 HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFV 463
L +L P SG Y +LSNIYA G W + +R M+ +G+KK+PG S +E++ +VH F+
Sbjct: 500 LLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFL 559
Query: 464 AGDTSHPDFDRLYQILCKINGQMK 487
AGD HP +Y L + G+MK
Sbjct: 560 AGDQYHPQAKNIYGELDVLVGKMK 583
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 9/296 (3%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++ Y+ G+ + AR +F+ EKNV+ + +I Y + EA+++F+ M PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
L AC+ L + +G +H+ I + GL+T + + NAL+ MY K G + +A +V +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M + V++W +M+AG A G +AL++ M+ + + T ++ C+ L +
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLL 386
+Y + M R + + + MI + EA L +M + +A SLL
Sbjct: 257 --QYIHNMFERM-TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 387 AASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
A + LG +++ K L P+ A+L ++YA G E+ + MR
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLRPNLLLENALL-DMYAKCGCLEEARDVFDKMR 368
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/491 (38%), Positives = 292/491 (59%), Gaps = 14/491 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I G Q + + + C+ +L YA IF H P+VYLY I A + +
Sbjct: 78 LITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDHVESPNVYLYTAMITAYASHSDHTS 137
Query: 60 AVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY N ++ P+++ +P VLK+ ++ R +HCQ + +G + V AL+
Sbjct: 138 ALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALL 197
Query: 119 QMYAS-CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
Y + AR +FDE++ R NV W M++GY ++G + NA LFE M E++V S
Sbjct: 198 DAYLRFWSDVESARLLFDEMTER--NVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPS 255
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQV-------ENVKPDEIAMLAALSACAQLGAVELGE 230
W LIAGY Q EA++LFRRM + +P+++ + +LSAC G + LG+
Sbjct: 256 WNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGK 315
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
WIH Y+ + GL ++NAL+DMY K G + +A +VF+ +S+ +W +MI LALHG
Sbjct: 316 WIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHG 375
Query: 291 LGREALDMFSRMER--ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+ A+ +F M + VKP+E+TFI +L+AC H GLVE G YF +M YGIEP+IE
Sbjct: 376 QSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIE 435
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
YGC++DLLGRAG +EA +++R M E + IWGSLL I+G +L E +++ LI +
Sbjct: 436 HYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDM 495
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
+P+N G +L+NIY LG+W+E K+RKV+++ K PGCS+IE+ +VH+F + D +
Sbjct: 496 DPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKT 555
Query: 469 HPDFDRLYQIL 479
HP + +Y L
Sbjct: 556 HPRTEEIYNTL 566
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 297/490 (60%), Gaps = 11/490 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M R L N++LS + + LG A +F + DV +NT + A Q A
Sbjct: 121 MSARNLYSWNNMLSGY----AKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEA 176
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y++ + ++ + +SF VL VKL + L R++H Q + G S+V + ++++
Sbjct: 177 LRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDA 236
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + DARK+FDE+S R +V W TMV+GYAK GD+ +A LF M EKN +SWT
Sbjct: 237 YVKCGLMGDARKLFDEMSAR--DVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTA 294
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-- 238
LI+GYA+ ++A+ LF +M + +V+PD+ + L ACA + +++ G+ IH Y+ +
Sbjct: 295 LISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRIN 354
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALD 297
+ NTIV +ALIDMY+K G +G +VF+ M NK V+ W T+I+ LA HG G EA+
Sbjct: 355 FQPNTIVV--SALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQ 412
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
M M R+ KP++ITF+ IL+AC H GLV+ G +F M YGI P E Y C+IDLL
Sbjct: 413 MLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLL 472
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG +E L +MP++ + +W +LL I+G +ELG A + LI+LEP +S Y
Sbjct: 473 GRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYV 532
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LS+IYA+LGRW K+R++M + VKK S++E+ +VH F D+SHP +++Y
Sbjct: 533 LLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYS 592
Query: 478 ILCKINGQMK 487
+L ++ GQM+
Sbjct: 593 VLEQLAGQME 602
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 200/419 (47%), Gaps = 41/419 (9%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
S +L FS + + + +P + I LC+ + AV + LR D+ +
Sbjct: 5 SSPNLNFSPFRTNPRKPRRRPCLV---EAIVKLCKKNKLNEAVSSLENLARRGLRLDSRT 61
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARKVFDEL 137
+L+ + G+ +H TGL ++ LI MYA C +ARKVFD++
Sbjct: 62 LASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKM 121
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
S R N+ WN M++GYAK+G + AR LF+ M EK+V+SW T++ +AQ +EA+
Sbjct: 122 SAR--NLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRF 179
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
+ + ++ + + L+ C +L V L +H I G + V L+++++D Y K
Sbjct: 180 YSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVK 239
Query: 258 SGKIGKALQVFENMKNKSVITWTTM-------------------------------IAGL 286
G +G A ++F+ M + V+ WTTM I+G
Sbjct: 240 CGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGY 299
Query: 287 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
A +G+G +AL++F++M V+P++ TF + L AC + ++ G++ + R +P
Sbjct: 300 ARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYL-LRINFQPN 358
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ID+ + G L K+ M + + +W ++++A +G GE A+Q L
Sbjct: 359 TIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG---CGEEAIQML 414
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/464 (39%), Positives = 288/464 (62%), Gaps = 8/464 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD L+ + + L YA ++F KP VYLYN I+ +P +LY
Sbjct: 15 GLDHTKFLIEKLLQ----LPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLY 70
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + P+ YSF F+ A L + G+ +H +G SD+ + AL+ MYA
Sbjct: 71 CQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKL 130
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR++FDE+ +R ++ WN+++AGYA+ G + A LF M +NVISWT LI+G
Sbjct: 131 GMLRSARQLFDEMPVR--DIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISG 188
Query: 185 YAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
YAQ + +A+ +F ++ E KP+E+++ + L AC+QLGA+++G+ I Y G
Sbjct: 189 YAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFK 248
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRM 302
++NA+++++A+ G I +A QVF+ + +K ++ +W TMI GLA+HG +AL ++ +M
Sbjct: 249 NAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQM 308
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+++P+++TF+ +L AC H G+V GR+ F M+S++ + PK+E YGC++DLLGRAG
Sbjct: 309 LIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGE 368
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA L++ MP ++ IWG+LL A + +G+VELGE A + L KLEP N GNY ILSNI
Sbjct: 369 LQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNI 428
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
YA+ G W+ ++RK+M+ + K G SYIEV +HEF+ D
Sbjct: 429 YALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVED 472
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 144/303 (47%), Gaps = 16/303 (5%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
++IH ++ GLD ++ L+Q+ + A +FD++ +V ++N + ++
Sbjct: 5 KQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKP--SVYLYNKFIQTFS 58
Query: 156 KVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
+G + L+ M + N S+T L A + L D
Sbjct: 59 SIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMF 118
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
AM A L A+LG + + + + +P N+LI YA+SG + AL++F M
Sbjct: 119 AMTALLDMYAKLGMLRSARQLFDEMPVRD----IPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELG 330
++VI+WT +I+G A +G +AL+MF +E + KPNE++ ++L AC +G +++G
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIG 234
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+R ++ G +++L R G ++EA+++ + + N W +++
Sbjct: 235 KRIEAYARNN-GFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLA 293
Query: 391 IYG 393
++G
Sbjct: 294 VHG 296
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 27/247 (10%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH Y + GL+ LI+ + + A +F+ + SV + I + G
Sbjct: 7 IHAYSLRNGLDH----TKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGH 62
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY 350
++ +M PN+ +F + AC + V G+ + + KS G +
Sbjct: 63 PHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS--GFASDMFAM 120
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
++D+ + G L+ A +L MP + W SL+A G + E AL+ K+
Sbjct: 121 TALLDMYAKLGMLRSARQLFDEMPVR-DIPTWNSLIAGYARSGHM---EAALELFNKMPV 176
Query: 411 HNSGNYAILSNIYAILGRW-----------NESGKIRKVMRDMGVKKMPGCSY---IEVS 456
N ++ L + YA G++ NE G + V +P CS +++
Sbjct: 177 RNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASV--LPACSQLGALDIG 234
Query: 457 KRVHEFV 463
KR+ +
Sbjct: 235 KRIEAYA 241
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 193/481 (40%), Positives = 292/481 (60%), Gaps = 30/481 (6%)
Query: 28 YAYSIFTHKS-KPDVYLYNTTIKALC------QTDNPLNAVILYNKIQASALRPDNYSFP 80
YA IF + K + +L+N I+A+ Q +P++ +Y +++ + PD ++FP
Sbjct: 10 YANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPIS---VYLRMRNHRVSPDFHTFP 66
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
F+L + + LG+ H Q + GLD D V +L+ MY+SC + A++VFD+ +
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN++V YAK G +++AR LF+ M E+NVISW+ LI GY + EA+ LFR
Sbjct: 127 --DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 201 MQVEN-----VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
MQ+ V+P+E M LSAC +LGA+E G+W+H YI++Y + + L ALIDMY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 256 AKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEIT 313
AK G + +A +VF + K V ++ MI LA++GL E +FS M + + PN +T
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ IL AC H GL+ G+ YF +M +GI P I+ YGCM+DL GR+G ++EAE + M
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P E + IWGSLL+ S + GD++ E AL+ LI+L+P NSG Y +LSN+YA GRW E
Sbjct: 365 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME-- 422
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
G+ K+PGCSY+EV VHEFV GD S + +R+Y +L +I +++ A ++
Sbjct: 423 ---------GINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVT 473
Query: 494 N 494
+
Sbjct: 474 D 474
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/492 (36%), Positives = 300/492 (60%), Gaps = 9/492 (1%)
Query: 3 VRGLDQNNHLLS---RFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++ L Q++++L+ R + + + Y +F+ P+ + + I+A
Sbjct: 33 IKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTALIRAYALRGPLSQ 92
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALI 118
A+ Y+ ++ + P +++F + A + LG ++H QT+ G SD++V A+I
Sbjct: 93 ALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVI 152
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY C + AR VFDE+ R +V W ++ Y ++GD+ AR LF+ + K++++W
Sbjct: 153 DMYVKCGSLRCARMVFDEMPER--DVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTW 210
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T ++ GYAQ P +A+ +FRR++ E V+ DE+ ++ +SACAQLGA + WI + E
Sbjct: 211 TAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAES 270
Query: 239 --YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+G+ V + +ALIDMY+K G + +A VF+ M+ ++V ++++MI G A+HG R A+
Sbjct: 271 SGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAI 330
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+F M VKPN +TF+ +L+AC H GLV+ G++ F M+ YG+ P E Y CM DL
Sbjct: 331 KLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDL 390
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
L RAGYL++A +L+ MP E++ A+WG+LL AS+++G+ ++ E A + L +LEP N GNY
Sbjct: 391 LSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNY 450
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRL 475
+LSN YA GRW++ K+RK++R+ +KK PG S++E +H+FVAGD SHP + +
Sbjct: 451 LLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDVSHPKINEI 510
Query: 476 YQILCKINGQMK 487
+ L + ++K
Sbjct: 511 KKELNDLLERLK 522
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 295/540 (54%), Gaps = 61/540 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ GL+ N+ + FI +CS +A +F +P+ +N + Q + +
Sbjct: 35 IVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDT 94
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V+L+ ++ A P+ ++FP ++K+ KL + G E+HC G S+ V +LI M
Sbjct: 95 VVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDM 154
Query: 121 YASCKCIYDA-------------------------------RKVFD---ELSLRVWNVAV 146
Y+ C+ DA R++FD E + +W+V +
Sbjct: 155 YSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLI 214
Query: 147 --------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
WN M+ GYA G++ +F+ M E+NV SW
Sbjct: 215 SGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNG 274
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI GY + +E + F+RM VE +V P++ ++A LSAC++LGA+++G+W+H Y E
Sbjct: 275 LIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESI 334
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + + N LIDMYAK G I A+ VF + K +I+W T+I GLA+HG +AL MF
Sbjct: 335 GYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMF 394
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
RM+ +P+ +TF+ ILSAC H+GLV+ G YF M Y I P+IE YGCM+DLLGR
Sbjct: 395 DRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGR 454
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L +A +R+MP E +A IW +LL A +Y +VE+ E ALQ LI+LEP+N N+ ++
Sbjct: 455 AGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMV 514
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIY LGR + +++ MRD G +K+PGCS IE + V EF + D H + + +Y++L
Sbjct: 515 SNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVL 574
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 118/295 (40%), Gaps = 49/295 (16%)
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
+I Q V GL+ + V I + K I+ ARK+FD++ N A WN M GY +
Sbjct: 30 QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQP--NTATWNAMFRGYLQ 87
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
G + LF + IAG P+
Sbjct: 88 NGHHRDTVVLFGELNR---------IAGM----------------------PNCFTFPMI 116
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
+ +C +L V GE +H ++G + + +LIDMY+K G + A +VF M ++V
Sbjct: 117 IKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNV 176
Query: 277 ITWTTMIAGLALHG---LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+ WT +I G L G GR D+ ER + + + ++S + R
Sbjct: 177 VVWTAIINGYILCGDVVSGRRLFDLAP--ER-----DVVMWSVLISGYIESKNMAAAREL 229
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
F+ M +R + + M++ G ++ EK+ MP E N W L+
Sbjct: 230 FDKMPNRDTM-----SWNAMLNGYAVNGEVEMFEKVFDEMP-ERNVFSWNGLIGG 278
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 294/497 (59%), Gaps = 19/497 (3%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N L+ R++D+ G + A +F S +V YNT I + N L + L++ +++
Sbjct: 102 NSLIKRYVDN----GCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRS 157
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
L PD+++ +L +L +LG+ +H Q + S++ + AL+ MY C +
Sbjct: 158 HGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKL 217
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
ARKVFD + + WNT++AGYAKVG+L A LF + ++++SW +LI+GYAQ
Sbjct: 218 ARKVFDGPMEK--DTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNG 275
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
LF RM ENVKPD++ ++ +SA A++GA++ G WIH + +
Sbjct: 276 DYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGS 335
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
ALIDMY K G I +A +F + K V TWTTMI G A HG G +AL++FS M+ A KP
Sbjct: 336 ALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-AETKP 394
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
N++TF+++L+AC H GLV+ G + F+ MK RY IEP +E YGC++DLL R+G L +A +
Sbjct: 395 NDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGV 454
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ +MP E + +IWG++L+A ++ ++EL E AL L+KLEP G Y +LSN+YA GRW
Sbjct: 455 IEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRW 514
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+ S IR+VM GVKK+ GCS + V VH+F A + HP + + IL + +M+
Sbjct: 515 SYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMR-- 572
Query: 490 EHLQNEFSGVLESDVAS 506
LE+DV S
Sbjct: 573 ----------LEADVPS 579
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 185/402 (46%), Gaps = 77/402 (19%)
Query: 27 DYAYSIFTHKSK-PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
+ A +F H + P++Y++NT I ++ A +Y + + PD +F ++L+
Sbjct: 17 ELAILLFNHFTPYPNLYIFNTMILGFPFSNE--KAFTIYRSMLQNGTYPDRQTFLYLLQT 74
Query: 86 VVKLSTIELGREIHCQTVGTGLDS-DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
++ + ++IHC + GL S + ++ +LI+ Y C AR++FDE+S R NV
Sbjct: 75 TKFVAEV---KQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDR--NV 129
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+NTM+ G+AKVG+ I G + LF M+
Sbjct: 130 VSYNTMILGFAKVGN----------------------ILG---------ILELFHDMRSH 158
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
++PD+ ML L C QLG +LG+ +H IE+ ++ + L NAL+DMY K ++ A
Sbjct: 159 GLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLA 218
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALD--------------------------- 297
+VF+ K ++W T+IAG A G A D
Sbjct: 219 RKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYV 278
Query: 298 ----MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--G 351
+F+RM VKP+++T + ++SA +G ++ GR + + KIE +
Sbjct: 279 TVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVK---MLTKIEAFSGS 335
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G ++ A + ++P E + W +++ +G
Sbjct: 336 ALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHG 376
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 8/226 (3%)
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
N+ + T+I G+ ++ +A T++R M PD L L + V+ IH
Sbjct: 31 NLYIFNTMILGFPFSNE--KAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVK---QIH 85
Query: 234 NYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
+ +GL + L N+LI Y +G A Q+F+ M +++V+++ TMI G A G
Sbjct: 86 CHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNI 145
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
L++F M ++P++ T + +L C +G +LG+ ++ G + Y
Sbjct: 146 LGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIG-SSNLILYNA 204
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
++D+ + L+ A K+ P E + W +++A G++EL
Sbjct: 205 LLDMYVKCNELKLARKVFDG-PMEKDTVSWNTIIAGYAKVGELELA 249
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 194/494 (39%), Positives = 299/494 (60%), Gaps = 10/494 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL---GFSDYAYSIFTHKSKP-DVYLYNTTIKALCQTDN 56
+I+ GL L R I S S+L G DYA + S P V+L+NTTI+ +
Sbjct: 11 LIINGLTHPPPSL-RPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTTIRGFSRARR 69
Query: 57 P---LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHV 113
P L++V+L+ ++ +L P+N++F F+ + +LGR+ H + + DV V
Sbjct: 70 PGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFV 129
Query: 114 VAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK 173
++I+ Y+ C + DAR VFDE S +V WN+M+ G + G++ A +LF MTE+
Sbjct: 130 RNSIIRFYSVCGRLNDARWVFDESS--ELDVVSWNSMIDGCIRNGNILEALSLFSKMTER 187
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
N ISW +I+GYAQ QP EA+ LFR MQ+ + +P+ +++ LSAC+QLGA++ G W+H
Sbjct: 188 NDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVH 247
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
YI + + L+ ALIDMYAK G I A+Q F + + V +T I+GLA++G
Sbjct: 248 CYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSE 307
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
EAL +F +M+ + P+ +++IA+L AC H G VE G YF M +GI P+++ Y CM
Sbjct: 308 EALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACM 367
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNS 413
+DLLGRAG L+EAEK + MP + + IWG+LL A +YG+ E+G+ L++ + ++
Sbjct: 368 VDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHD 427
Query: 414 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFD 473
G Y +LSNIYA + ++ ++RK MR V ++PGCS IEV+ VHEF +GD SH +
Sbjct: 428 GRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGDRSHEKTE 487
Query: 474 RLYQILCKINGQMK 487
+Y + +I ++K
Sbjct: 488 EIYLMWEEIVKEIK 501
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 294/497 (59%), Gaps = 19/497 (3%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N L+ R++D+ G + A +F S +V YNT I + N L + L++ +++
Sbjct: 167 NSLIKRYVDN----GCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRS 222
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
L PD+++ +L +L +LG+ +H Q + S++ + AL+ MY C +
Sbjct: 223 HGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKL 282
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
ARKVFD + + WNT++AGYAKVG+L A LF + ++++SW +LI+GYAQ
Sbjct: 283 ARKVFDGPMEK--DTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNG 340
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
LF RM ENVKPD++ ++ +SA A++GA++ G WIH + +
Sbjct: 341 DYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGS 400
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
ALIDMY K G I +A +F + K V TWTTMI G A HG G +AL++FS M+ A KP
Sbjct: 401 ALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-AETKP 459
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
N++TF+++L+AC H GLV+ G + F+ MK RY IEP +E YGC++DLL R+G L +A +
Sbjct: 460 NDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGV 519
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ +MP E + +IWG++L+A ++ ++EL E AL L+KLEP G Y +LSN+YA GRW
Sbjct: 520 IEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRW 579
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+ S IR+VM GVKK+ GCS + V VH+F A + HP + + IL + +M+
Sbjct: 580 SYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMR-- 637
Query: 490 EHLQNEFSGVLESDVAS 506
LE+DV S
Sbjct: 638 ----------LEADVPS 644
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 185/402 (46%), Gaps = 77/402 (19%)
Query: 27 DYAYSIFTHKSK-PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
+ A +F H + P++Y++NT I ++ A +Y + + PD +F ++L+
Sbjct: 82 ELAILLFNHFTPYPNLYIFNTMILGFPFSNE--KAFTIYRSMLQNGTYPDRQTFLYLLQT 139
Query: 86 VVKLSTIELGREIHCQTVGTGLDS-DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
++ + ++IHC + GL S + ++ +LI+ Y C AR++FDE+S R NV
Sbjct: 140 TKFVAEV---KQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDR--NV 194
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+NTM+ G+AKVG+ I G + LF M+
Sbjct: 195 VSYNTMILGFAKVGN----------------------ILG---------ILELFHDMRSH 223
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
++PD+ ML L C QLG +LG+ +H IE+ ++ + L NAL+DMY K ++ A
Sbjct: 224 GLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLA 283
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALD--------------------------- 297
+VF+ K ++W T+IAG A G A D
Sbjct: 284 RKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYV 343
Query: 298 ----MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--G 351
+F+RM VKP+++T + ++SA +G ++ GR + + KIE +
Sbjct: 344 TVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLA---VKMLTKIEAFSGS 400
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G ++ A + ++P E + W +++ +G
Sbjct: 401 ALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHG 441
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 8/226 (3%)
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
N+ + T+I G+ ++ +A T++R M PD L L + V+ IH
Sbjct: 96 NLYIFNTMILGFPFSNE--KAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVK---QIH 150
Query: 234 NYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
+ +GL + L N+LI Y +G A Q+F+ M +++V+++ TMI G A G
Sbjct: 151 CHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNI 210
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
L++F M ++P++ T + +L C +G +LG+ ++ G + Y
Sbjct: 211 LGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIG-SSNLILYNA 269
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
++D+ + L+ A K+ P E + W +++A G++EL
Sbjct: 270 LLDMYVKCNELKLARKVFDG-PMEKDTVSWNTIIAGYAKVGELELA 314
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 184/448 (41%), Positives = 280/448 (62%), Gaps = 1/448 (0%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
D+ ++ + Q + A++L+ +++ S + D L A ++ +E+GR +H
Sbjct: 234 DMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVH 293
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
V G++ V + ALI +Y+SC I DAR++FD+ + ++ WN+M++GY + G
Sbjct: 294 GLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGG-ELLDLISWNSMISGYLRCGS 352
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+ +A LF M EK+V+SW+ +I+GYAQ + +EA+ LF+ MQ+ V+PDE A+++A+SA
Sbjct: 353 IQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISA 412
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C L ++LG+WIH YI + L V L+ LIDMY K G + AL+VF M+ K V TW
Sbjct: 413 CTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTW 472
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
+I GLA++G ++L+MF+ M++ PNEITF+ +L AC H+GLV GR YFN M
Sbjct: 473 NAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIH 532
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ IE I+ YGCM+DLLGRAG L+EAE+L+ MP + A WG+LL A + D E+GE
Sbjct: 533 EHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGE 592
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
+ LI+L+P + G + +LSNIYA G W +IR +M GV K PGCS IE + V
Sbjct: 593 RLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTV 652
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMK 487
HEF+AGD +HP + + +L + ++K
Sbjct: 653 HEFLAGDKTHPQINDIEHMLDVVAAKLK 680
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 229/465 (49%), Gaps = 75/465 (16%)
Query: 2 IVRGLDQNNHLLSRFID-SCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKA-LCQTDNP 57
I+ GL + + SR I+ S S + YS IF H P+ + +NT ++A L ++P
Sbjct: 27 ILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSP 86
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKA-VVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A++ Y AS +PD+Y++P +L+ ++S E GR++H V +G D DV+V
Sbjct: 87 HQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFE-GRQLHAHAVSSGFDGDVYVRNT 145
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ +YA C + AR+VF+E V ++ WNT++AGY + G++ A +FE M E+N I
Sbjct: 146 LMNLYAVCGSVGSARRVFEESP--VLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTI 203
Query: 177 ---------------------------------SWTTLIAGYAQMDQPNEAITLFRRMQV 203
SW+ +++ Y Q + EA+ LF M+
Sbjct: 204 ASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKG 263
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V DE+ +++ALSAC+++ VE+G W+H + G+ V L NALI +Y+ G+I
Sbjct: 264 SGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVD 323
Query: 264 ALQVFEN--------------------------------MKNKSVITWTTMIAGLALHGL 291
A ++F++ M K V++W+ MI+G A H
Sbjct: 324 ARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHEC 383
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
EAL +F M+ V+P+E ++ +SAC H+ ++LG ++ + SR ++ +
Sbjct: 384 FSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLG-KWIHAYISRNKLQVNVILST 442
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ID+ + G ++ A ++ M E + W +++ + G VE
Sbjct: 443 TLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVILGLAMNGSVE 486
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 127/295 (43%), Gaps = 41/295 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + DV ++ I Q + A+ L+ ++Q +RPD + + A
Sbjct: 356 AEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTH 415
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L+T++LG+ IH L +V + LI MY C C+ +A +VF + + V+ WN
Sbjct: 416 LATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK--GVSTWN 473
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
++ G A G + +++ +F M+ P
Sbjct: 474 AVILGLAMNGSV-------------------------------EQSLNMFADMKKTGTVP 502
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+EI + L AC +G V G + ++ I ++ + + ++D+ ++G + +A ++
Sbjct: 503 NEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEEL 562
Query: 268 FENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAILS 319
++M V TW ++ H R+ +M R+ R +++P+ F +LS
Sbjct: 563 IDSMPMAPDVATWGALLGACRKH---RDN-EMGERLGRKLIQLQPDHDGFHVLLS 613
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 188/485 (38%), Positives = 280/485 (57%), Gaps = 5/485 (1%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
IV GL R +DS S+ YA +F PDV+ YN I+ L + P +++
Sbjct: 49 IVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDVFAYNAMIRGLTLGNCPYDSL 108
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+LYNK+ L PDNY++ FVLK L I G+++HCQ + G+ D H+ +LI MY
Sbjct: 109 LLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMY 168
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C+ A V E S NV N+M++GY G + ARA+F+ M K+ +W+ +
Sbjct: 169 AKSDCLACAEGVLAECSQE--NVLAINSMISGYMSQGHVEKARAMFDKMGAKDAATWSGM 226
Query: 182 IAGYAQMDQPNEAITLFRRMQV---ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
I GY + EA+ +FR M + V+P+E A++++LSA A LGA++ G WIH YI +
Sbjct: 227 ITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQGRWIHAYIRR 286
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G + L L+DMYAK G I + ++F M+ + V+TW M++G A+HG R+ +
Sbjct: 287 IGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFAMHGQARKCFQL 346
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M +PNE+ F+AILSAC H G +ELG YFN M + +GI P +E YGCM+DLLG
Sbjct: 347 FDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGCMVDLLG 406
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L EAE+L+ MP E A IWG+LL+A I+ D+ G A + L++LEP Y +
Sbjct: 407 RAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLRGDRYKL 466
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
+++ G E+ + + +++ ++ G S+IE++ VHEFV GD H +Y++
Sbjct: 467 AGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIEINGVVHEFVVGDADHHKAREMYRM 526
Query: 479 LCKIN 483
IN
Sbjct: 527 WEGIN 531
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 134/333 (40%), Gaps = 69/333 (20%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R+IH Q + +GL + L+ Y S IY A VF+ +
Sbjct: 42 RQIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIP----------------- 84
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+V ++ +I G + P +++ L+ ++ + + PD
Sbjct: 85 ----------------SPDVFAYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTF 128
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS----------------- 258
L C+ L A+ G+ +H + + G+ ++ +LI MYAKS
Sbjct: 129 VLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECSQEN 188
Query: 259 --------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-- 302
G + KA +F+ M K TW+ MI G +G+ EAL MF M
Sbjct: 189 VLAINSMISGYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMM 248
Query: 303 -ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
+ V+PNE ++ LSA +G ++ G R+ + R G + I ++D+ + G
Sbjct: 249 VSNSGVQPNESALVSSLSATACLGALDQG-RWIHAYIRRIGAKISITLGTGLVDMYAKCG 307
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ + KL R M + + WG +++ ++G
Sbjct: 308 SIHCSYKLFREMQ-QRDVVTWGVMMSGFAMHGQ 339
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/410 (43%), Positives = 261/410 (63%), Gaps = 3/410 (0%)
Query: 74 PDNYSFPFVLKAVVK-LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P ++ VL A K + LG ++H + VG+G+ D+ V AL+ MYA C + A K
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWK 179
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD + +R +V W ++++G A++G ++ AR LF+ M E++ +SWT +I GY +
Sbjct: 180 VFDGMQVR--SVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFR 237
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ +FR MQ NV DE M++ ++ACAQLGA+E+GEW+ Y+ + G+ + NALI
Sbjct: 238 EALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALI 297
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY+K G I +AL VF+ M ++ TWT +I GLA++G EA++MF RM R P+E+
Sbjct: 298 DMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEV 357
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TFI +L+AC H GLV+ GR +F M Y I P + YGC+IDLLGRAG + EA + +
Sbjct: 358 TFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQ 417
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP N+ IWG+LLAA ++G+ E+GE + L++L+P NS Y +LSNIYA RW +
Sbjct: 418 MPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDV 477
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
++R + + G+KK PGCS IE+ +HEFVAGD SHP +Y L I
Sbjct: 478 RRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESI 527
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 72/351 (20%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLS----TIELGREIHCQTVGTGLDSDVHVV 114
+AV Y ++ A RPD Y+FP +LKAV + + + R +H V G+ + HV
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
++L+ Y + AR + E +T VA
Sbjct: 62 SSLVAAYTAGGDGAAARALVGEC----------DTPVA---------------------- 89
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ-LGAVELGEWIH 233
W LI+G+ + + E+ F M P + ++ LSAC + V LG +H
Sbjct: 90 ---WNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVH 146
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG--- 290
+ G+ + + NAL+DMYA+ +G A +VF+ M+ +SV++WT++++GLA G
Sbjct: 147 GRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVD 206
Query: 291 ----------------------------LGREALDMFSRMERARVKPNEITFIAILSACC 322
REAL+MF M+ + V +E T +++++AC
Sbjct: 207 EARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACA 266
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+G +E+G + + SR GI+ +ID+ + G ++ A + + M
Sbjct: 267 QLGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + LLS + LG D A +F + D + I A
Sbjct: 184 MQVRSVVSWTSLLS----GLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREA 239
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ ++Q S + D ++ V+ A +L +E+G + G+ D V ALI M
Sbjct: 240 LEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDM 299
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C G + A +F+ M ++ +WT
Sbjct: 300 YSKC---------------------------------GSIERALDVFKGMHHRDKFTWTA 326
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
+I G A EAI +F RM + PDE+ + L+AC G V+ G E+ + IE Y
Sbjct: 327 IILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAY 386
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ V +ID+ ++GKI +AL + M + W T++A +HG
Sbjct: 387 NIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHG 438
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 19/215 (8%)
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQL----GAVELGEWIHNYIEQYGLNTIVPL 247
+A+ + RM +PD A L A A+ G+ +H ++ + G+ +
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
++L+ Y G A + + W +I+G G E+ F M RA
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 308 KPNEITFIAILSACCH------VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
P +T++++LSAC +G+ GR ++ S G+ P + ++D+
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGR----VVGS--GVLPDLRVENALVDMYAECA 172
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ A K+ M + + W SLL+ G V+
Sbjct: 173 DMGSAWKVFDGMQVRSVVS-WTSLLSGLARLGQVD 206
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +G+ + + + ID S G + A +F D + + I L A
Sbjct: 281 MSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEA 340
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV-GTGLDSDVHVVAALIQ 119
+ +++++ + PD +F VL A ++ GRE + + +V +I
Sbjct: 341 IEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIID 400
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVA-----GYAKVGDLNNARALFELMTEKN 174
+ I +A D++ + N +W T++A G +++G+L R L EL E +
Sbjct: 401 LLGRAGKITEALDTIDQMPMTP-NSTIWGTLLAACRVHGNSEIGELVAER-LLELDPENS 458
Query: 175 VI 176
++
Sbjct: 459 MV 460
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/485 (37%), Positives = 288/485 (59%), Gaps = 36/485 (7%)
Query: 6 LDQNNHLLSRFIDSCS---SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
L + +L++ I+SC+ + DYA+ +F +PD+ L+N+ + +++ PL A+
Sbjct: 54 LQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAIS 113
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+ K L PD+Y+FP +LKA V + G+++HC + GL+ + +V LI MYA
Sbjct: 114 LFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYA 173
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C + A++VFDE+ V +N ++ GYA+
Sbjct: 174 GCNDVDGAQRVFDEILEPC--VVSYNAIITGYARSS------------------------ 207
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+PNEA++LFR++Q +KP+++ +L+ LS+CA LGA++LG+WIH Y+++ GL+
Sbjct: 208 -------RPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLD 260
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
V +N ALIDMYAK G + A+ VFE+M + W+ MI A+HG G++ + MF M
Sbjct: 261 KYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEM 320
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
RA+V+P+EITF+ +L AC H GLV+ G RYF M YGI P I+ YGCM+DLLGRAG
Sbjct: 321 ARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGL 380
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L EA K + +P + +W +LL++ + +G++EL + + +++L+ + G+Y ILSN+
Sbjct: 381 LHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNL 440
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
A G+W + +RK+M G K+PGCS IEV VHEF +GD H L++ L ++
Sbjct: 441 CARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDEL 500
Query: 483 NGQMK 487
++K
Sbjct: 501 VKELK 505
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL++N ++ I+ + D A +F +P V YN I ++ P A+ L+
Sbjct: 157 GLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLF 216
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++QA L+P++ + VL + L ++LG+ IH GLD V V ALI MYA C
Sbjct: 217 RQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKC 276
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A VF+ +S+R + W+ M+ YA G
Sbjct: 277 GSLDGAISVFESMSVR--DTQAWSAMIVAYAMHG-------------------------- 308
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
Q + +++F M V+PDEI L L AC+ G V+ G + ++ E YG+
Sbjct: 309 -----QGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIP 363
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSV-ITWTTMIAGLALHG 290
+ ++D+ ++G + +A + + + K I W T+++ + HG
Sbjct: 364 GIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHG 411
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 292/523 (55%), Gaps = 51/523 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSS--LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I GL + +R I C + G +YA+ +F P ++++NT IK + +P N
Sbjct: 31 IKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPEN 90
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V +Y + S ++PD ++FPF LK + ++ G+E+ V G DS++ V A I
Sbjct: 91 GVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIH 150
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV---------------------- 157
M++ C + A KVFD V WN M++GY +V
Sbjct: 151 MFSLCGIVDLAHKVFDMGD--ACEVVTWNIMLSGYNRVKQFKISKMLLVLSACSKLKDLE 208
Query: 158 ---------------------GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
G+++ A+ +F+ M ++V+SWT +I GY +M+ A+
Sbjct: 209 WGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALA 268
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LFR MQ+ NVKPDE M++ L ACA LGA+ELGEW+ I++ + NAL+DMY
Sbjct: 269 LFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYF 328
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G + KA +VF+ M K TWTTMI GLA++G G EAL MFS M A V P+EIT+I
Sbjct: 329 KCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIG 388
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L AC +V+ G+ +F M ++GI+P + YGCM+DLLG G L+EA +++ MP +
Sbjct: 389 VLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVK 444
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
N+ +WGS L A ++ +V+L + A + +++LEP N Y +L NIYA +W ++R
Sbjct: 445 PNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVR 504
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K+M + G+KK PGCS +E++ V+EFVAGD SHP +Y L
Sbjct: 505 KLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 547
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 135/309 (43%), Gaps = 44/309 (14%)
Query: 118 IQMYASCKCIYDARKVFDE-LSLRVWNVAVWNTMVAGYA---KVGDLNNARALFELMTEK 173
I + CK +Y +++ + + + + ++ V + + G++N A +F+ +
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHP 70
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
++ W T+I GY+++ P ++++ M N+KPD +L + A++ G+ +
Sbjct: 71 SMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELL 130
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
N+ ++G ++ + + A I M++ G + A +VF+ V+TW M++G
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSG-------- 182
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI---------------MK 338
++R+++ ++ + +LSAC + +E G+ F M
Sbjct: 183 -----YNRVKQFKIS----KMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMD 233
Query: 339 SRYGIEPKIE-----QYGCMIDLLGRAGYLQEAEKLLRRMPF---EANAAIWGSLLAASN 390
G+ ++ + MID R + A L R M + + S+L A
Sbjct: 234 EAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACA 293
Query: 391 IYGDVELGE 399
+ G +ELGE
Sbjct: 294 LLGALELGE 302
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 296/492 (60%), Gaps = 17/492 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDS---CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
++ GL QN LL I S C +L F+ + F S P ++N I+A +T +
Sbjct: 78 VVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQF--PSLPPTIIWNLMIQAYSKTPSS 135
Query: 58 LNAVILYNKIQASALRP---DNYSFPFVLKAVVKLSTIE-LGREIHCQTVGTGLDSDVHV 113
++ L++++ A RP D Y+F FV A + T+ G +H V G +SD+ V
Sbjct: 136 QESLYLFHQMLAHG-RPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFV 194
Query: 114 VAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK 173
+L+ MY+ + DA++VFDE+ R +V W ++V GYA G+L AR LF++M +
Sbjct: 195 GNSLVNMYSIFSRMVDAKRVFDEMPQR--DVITWTSVVKGYAMRGELVRARELFDMMPGR 252
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWI 232
N +SW ++AGY NEA+ F M + VKP+E +++ LSACA LGA++ G+WI
Sbjct: 253 NDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWI 312
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H YI++ + ++ ALIDMYAK G+I A +VF+ + + ++TWT+MI+GL++HGLG
Sbjct: 313 HVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLG 372
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
E L FS M KP++IT + +L+ C H GLVE G F+ M +GI PK+E YGC
Sbjct: 373 AECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGC 432
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP-H 411
+IDLLGRAG L+ A + ++ MP E + W +LL+A I+GDV+LGE + H+ +L P
Sbjct: 433 LIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGS 492
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
+ G Y +LSN+YA +G+W K+RK M G + PGCS+IE+ VHEF+A D HP
Sbjct: 493 HGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHP- 551
Query: 472 FDRLYQILCKIN 483
R+ +I K+N
Sbjct: 552 --RISEINKKLN 561
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 152/354 (42%), Gaps = 70/354 (19%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
P + +F +LK L+ I ++IH Q V GL + ++ LI Y C+ + AR V
Sbjct: 53 PSHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
FD+ + +WN M+ Y+K + LF M +P
Sbjct: 110 FDQFP-SLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG---------------RPTS 153
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVE-LGEWIHNYIEQYGLNTIVPLNNALI 252
A D+ +AC++ + GE +H + + G + + + N+L+
Sbjct: 154 A--------------DKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLV 199
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG------------LGR------- 293
+MY+ ++ A +VF+ M + VITWT+++ G A+ G GR
Sbjct: 200 NMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAV 259
Query: 294 ------------EALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKS 339
EAL F+ M VKPNE ++ILSAC H+G ++ G+ + I K+
Sbjct: 260 MVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKN 319
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
R + I +ID+ + G + A ++ + + + W S+++ +++G
Sbjct: 320 RILLSSNIST--ALIDMYAKCGRIDCARRVFDGL-HKRDLLTWTSMISGLSMHG 370
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/523 (40%), Positives = 304/523 (58%), Gaps = 48/523 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS---DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI L + +SR I CS G S DYA S+F+ P+ +++ IK T NP
Sbjct: 29 MIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNP 88
Query: 58 LNAVILYNKIQASALRPDN---YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
+ ++ILY ++ S L + +S P VLKA KL + GR++H Q + T L D V
Sbjct: 89 VESLILYARM-LSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVG 147
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF------- 167
++++MY I AR+VFD + R +V WN+M+AGY K G++ A LF
Sbjct: 148 NSMVRMYIDFGEIELARRVFDRMPNR--DVVSWNSMIAGYLKAGEIELASELFDEMPERD 205
Query: 168 ------------------------ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
E M++K+V++WT++I+ Y Q P +A+ LFR M
Sbjct: 206 LVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLS 265
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIG 262
++PD A+++ LSA A LG VE G+W+H Y+ + + +ALIDMY+K G I
Sbjct: 266 LGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIE 325
Query: 263 KALQVFENMKNKSVI-TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A VF ++ ++ I W +MI+GLA+HGL REALD+F MER ++PNEITF+ +LS C
Sbjct: 326 NAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTC 385
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLVE G+ YF M +Y I P+I+ YGCMIDL GRAG L++A +++ MPFEA+
Sbjct: 386 SHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLA 445
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W ++L+AS +G +E+G+ A I+L P +S +Y +LSNIYA GRW++ KIR +MR
Sbjct: 446 WKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQ 505
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY--QILCKI 482
GVKK+ GCS + V +VHEF+ G + D Y Q+L KI
Sbjct: 506 RGVKKIAGCSSMLVBGKVHEFLXGK----ELDSSYSGQVLAKI 544
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/461 (39%), Positives = 280/461 (60%), Gaps = 4/461 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
+AY +F +++NT I+ + + A+ LY + + P+NY+F FVL+A
Sbjct: 62 HAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACT 121
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
S + L H Q + G +S V+ LI +YA+ + ARK+FD + R +V W
Sbjct: 122 DNSPVGLAS--HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCR--DVITW 177
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ GY K G + AR LF+ M E+N +SW+ +I GY M EA+ LF +Q+ ++
Sbjct: 178 TALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLR 237
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+ ++ AL+AC+ LG+++ G WIH Y+++ G L AL+DMYAK G I A V
Sbjct: 238 PNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSV 297
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE M +K +T++I+GLA HG +A+ +F RM+ +V PNE+TFI +LSAC +GLV
Sbjct: 298 FEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLV 357
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G R FN M YGIEP ++ YGCM+DLLGRAG L+EA++L+R MP E ++ + G+LL
Sbjct: 358 DEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLN 417
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
+ ++GDVELG+ ++ L++ + G + +LSN+YA +W+ K+RK M VKK+
Sbjct: 418 SCRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKV 477
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
PGCS IE+ V EF+AGD S+ + + +L I+ +KF
Sbjct: 478 PGCSSIEIDGSVSEFIAGDMSYLRVEDVMLVLLGIDNHLKF 518
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 34/249 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G ++A +F + + ++ I A+ L+N +Q + LRP++ L
Sbjct: 188 GHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGAL 247
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L +++ GR IH G + D + AL+ MYA C CI A V
Sbjct: 248 TACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSV---------- 297
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
FE M +K+ ++T+LI+G A Q +AI LF RMQ
Sbjct: 298 -----------------------FEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQS 334
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIG 262
E V P+E+ + LSAC+++G V+ G I N + YG+ V ++D+ ++G +
Sbjct: 335 EKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLE 394
Query: 263 KALQVFENM 271
+A ++ M
Sbjct: 395 EAKRLVREM 403
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 291/502 (57%), Gaps = 33/502 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+ + L N+ ++++ I S SL DYA SIF P+++++N I+ L + +
Sbjct: 63 IFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGS 122
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V + + ++RPD + PFVLK+V L + LGR +H + GL+ D V +L+ M
Sbjct: 123 VSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDM 182
Query: 121 YASCKCIYDARKVFDELSLR-------VWNVAV--------------------------W 147
Y + ++FDE R +WNV + W
Sbjct: 183 YVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSW 242
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N+++ G+ + GDL+ AR LF M EKNV+SWTT+I G++Q +A+++F RM E V+
Sbjct: 243 NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 302
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+++ +++AL AC ++GA+++GE IHNY+ G + AL+DMYAK G I A +V
Sbjct: 303 PNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRV 362
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F K K ++TW+ MI G A+HG +AL F +M+ A + P+E+ F+AIL+AC H G V
Sbjct: 363 FVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNV 422
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G +F M+ Y IEP ++ Y ++DLLGRAG L EA ++ MP + IWG+L
Sbjct: 423 DQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFC 482
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A + ++E+ E + L++LEP + G+Y LSN+YA +GRW + ++R +M++ GV+K
Sbjct: 483 ACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKD 542
Query: 448 PGCSYIEVSKRVHEFVAGDTSH 469
PG SYIEV +VH FVAGD +H
Sbjct: 543 PGWSYIEVEGQVHSFVAGDHAH 564
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 55/301 (18%)
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
I ++ A + QL + ++HN + T LI + AL +F
Sbjct: 44 IPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVT------QLISSSCSLKSLDYALSIFRC 97
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA---------- 320
+ ++ + +I GLA + ++ F M R ++P+ +T +L +
Sbjct: 98 FDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLG 157
Query: 321 -CCHVGLVELGRR------------YFNIMKSRYGIE-----PK------IEQYGCMIDL 356
C H G+++LG Y I + +G++ P+ I + +I+
Sbjct: 158 RCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLING 217
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
+ G L +A L MP E NA W SL+ GD++ A + +++ N ++
Sbjct: 218 CCKVGDLSKAASLFEAMP-ERNAGSWNSLINGFVRNGDLDR---ARELFVQMPEKNVVSW 273
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSYI---EVSKRVHEFVAG 465
+ N ++ G ++ + M + GV+ + C+ I +V +R+H +++
Sbjct: 274 TTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSS 333
Query: 466 D 466
+
Sbjct: 334 N 334
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 292/479 (60%), Gaps = 2/479 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
F+D +S G +YA ++F S DV +NT I+ C+ A L+ +++ S + PD
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ A + + R I+ + + D H++ AL+ MYA C+ AR+ F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
++S+R N+ V MV+GY+K G L++A+ +F+ +K+++ WTT+I+ Y + D P EA+
Sbjct: 272 KMSVR--NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F M +KPD ++M + +SACA LG ++ +W+H+ I GL + + +NNALI+MY
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + VFE M ++V++W++MI L++HG +AL +F+RM++ V+PNE+TF+
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L C H GLVE G++ F M Y I PK+E YGCM+DL GRA L+EA +++ MP
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+N IWGSL++A I+G++ELG+ A + +++LEP + G ++SNIYA RW + I
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
R+VM + V K G S I+ + + HEF+ GD H + +Y L ++ ++K A ++ +
Sbjct: 570 RRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 189/375 (50%), Gaps = 19/375 (5%)
Query: 28 YAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA ++F+ S P+ ++N ++ L ++ P ++ Y +I+ R D +SF +LKAV
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
K+S + G E+H D V + MYASC I AR VFDE+S R +V
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR--DVVT 179
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI------AGYAQMDQPNEAITLFRR 200
WNTM+ Y + G ++ A LFE M + NV+ ++ G + N AI F
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF-- 237
Query: 201 MQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+EN V+ D + A ++ A G +++ + + + + ++ A++ Y+K G
Sbjct: 238 -LIENDVRMDTHLLTALVTMYAGAGCMDMA---REFFRKMSVRNLF-VSTAMVSGYSKCG 292
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
++ A +F+ + K ++ WTTMI+ +EAL +F M + +KP+ ++ +++S
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC ++G+++ + + + G+E ++ +I++ + G L + +MP N
Sbjct: 353 ACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNV 410
Query: 380 AIWGSLLAASNIYGD 394
W S++ A +++G+
Sbjct: 411 VSWSSMINALSMHGE 425
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR L + ++S + S G D A IF K D+ + T I A ++D P A
Sbjct: 273 MSVRNLFVSTAMVSGY----SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ ++ S ++PD S V+ A L ++ + +H GL+S++ + ALI M
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + R VF+++ R NV W++M+ + G+ ++A +LF
Sbjct: 389 YAKCGGLDATRDVFEKMPRR--NVVSWSSMINALSMHGEASDALSLFA------------ 434
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQY 239
RM+ ENV+P+E+ + L C+ G VE G+ I + ++Y
Sbjct: 435 -------------------RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
+ + ++D++ ++ + +AL+V E+M S V+ W ++++ +HG
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/453 (40%), Positives = 284/453 (62%), Gaps = 14/453 (3%)
Query: 48 IKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL 107
I+ Q++ P V LYN++ + P+ +++ F++ + + G ++H + V G
Sbjct: 2 IRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGY 61
Query: 108 DSDVHVVAALIQMYA---SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
++V V +L+ +YA + AR+VFDE+ R N+ WN+++AGY + GD++ AR
Sbjct: 62 CTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDR--NIVSWNSLLAGYVRCGDVDGAR 119
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
+F+ M E+NV+SWTT+IAG AQ+ + +A+ LF M+ VK D++A++AALSACA+LG
Sbjct: 120 RIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELG 179
Query: 225 AVELGEWIHNYIEQ--YGLNT--IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
++LG WIH+YI++ + N +V LNN+LI MYA G I KA +VF M+ +S I+WT
Sbjct: 180 DLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWT 239
Query: 281 TMIAGLALHGLGREALDMFSRMERARV---KPNEITFIAILSACCHVGLVELGRRYFNIM 337
+MI G A G EAL +F M+R +P+ ITFI +L AC H G V+ GR +F M
Sbjct: 240 SMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECM 299
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
++GI P+IE YGCM+DLL RAG+L EA +L+ MP + N A+WG+LL I+ + EL
Sbjct: 300 NKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAEL 359
Query: 398 GECALQHL-IKLEPHNSGNY-AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
Q L ++L+P + Y +LSN+YA RW + +R+ M ++GV+K G S++++
Sbjct: 360 ASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQI 419
Query: 456 SKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+ VH+FVAGD +H +Y++L KI Q K
Sbjct: 420 NGVVHDFVAGDWTHKHASSVYEMLSKITRQAKL 452
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 38/265 (14%)
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I G++Q + P++ + L+ RM +P+E + CA+ + GE +H + G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 241 LNTIVPLNNALIDMYA----------------------------------KSGKIGKALQ 266
T V + +L+++YA + G + A +
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F+ M ++V++WTTMIAG A G ++AL +F M RA VK +++ +A LSAC +G
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 327 VELGRRYFNIMKSRY--GIEP-KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
++LG + + R G +P + +I + G + +A K+ M + + W
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS-WT 239
Query: 384 SLLAASNIYGDVELGECALQHLIKL 408
S++ G E Q + +L
Sbjct: 240 SMITGFAKQGHAEEALGVFQWMQRL 264
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 50/300 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ R + N LL+ ++ G D A IF + +V + T I Q A
Sbjct: 94 IVDRNIVSWNSLLAGYV----RCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQA 149
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH-------- 112
+ L+++++ + ++ D + L A +L ++LG IH + +D +H
Sbjct: 150 LHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIH-----SYIDERLHAGNQPLLV 204
Query: 113 -VVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT 171
+ +LI MYASC I A KVF + R + W +M+ G+AK G A +F+ M
Sbjct: 205 SLNNSLIHMYASCGVIDKAYKVFIGMQQR--STISWTSMITGFAKQGHAEEALGVFQWM- 261
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
+R+ + +PD I + L AC+ G V+ G
Sbjct: 262 ---------------------------QRLGTDEGRPDGITFIGVLCACSHAGFVDQGRH 294
Query: 232 IHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
+ +++G+ + ++D+ +++G + +A ++ E+M K + W ++ G +H
Sbjct: 295 FFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIH 354
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 289/479 (60%), Gaps = 2/479 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D ++ G +YA ++F S+ DV +NT I+ C+ A L+ +++ S + PD
Sbjct: 155 LMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPD 214
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ A + + R I+ + + D H++ AL+ MYA C+ A + F
Sbjct: 215 EMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFR 274
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
++S+R N+ V MV+GY+K G L++AR +F+ K+++ WTT+I+ YA+ D P EA+
Sbjct: 275 KMSVR--NLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEAL 332
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F M +KPD + ML+ +SAC LG ++ +W+H Y GL +++P++NALI+MY
Sbjct: 333 RVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMY 392
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + A VFE M ++V++W++MI A+HG ++L +F++M++ V+PNE+TF+
Sbjct: 393 AKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFV 452
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L C H GLVE G++ F M Y I PKIE YGCM+DL GRA L+EA +++ MP
Sbjct: 453 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPM 512
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
N IWGSL++A ++G++ELGE A + ++KLEP + G ++SNIYA RW+ I
Sbjct: 513 APNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRII 572
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
R +M V K G S I+++ + HEF+ GD H + +Y L ++ ++K A ++ +
Sbjct: 573 RWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPD 631
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 195/378 (51%), Gaps = 25/378 (6%)
Query: 28 YAYSIFTHKSK-PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA ++F+ S P+ ++N+ ++ L ++ P ++ Y +I+ R D SFP +LKAV
Sbjct: 65 YALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAV 124
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
K+S + G E+H SD V L+ MYA+C I AR VFDE+S R +V
Sbjct: 125 SKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQR--DVVT 182
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI------AGYAQMDQPNEAITLFRR 200
WNTM+ Y + G L+ A LFE M + NV+ ++ G + N AI F
Sbjct: 183 WNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDF-- 240
Query: 201 MQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+EN V+ D + A ++ A G +++ + + + + ++ A++ Y+K+G
Sbjct: 241 -LIENDVRMDTHLLTALVTMYAGAGCMDMA---MEFFRKMSVRNLF-VSTAMVSGYSKAG 295
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
++ A +F+ + K ++ WTTMI+ A +EAL +F M + +KP+ +T ++++S
Sbjct: 296 RLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVIS 355
Query: 320 ACCHVGLVELGR---RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
AC ++G ++ + RY ++ G+E + +I++ + G L A + +MP
Sbjct: 356 ACVNLGTLDKAKWVHRYTHL----NGLESVLPIDNALINMYAKCGGLDAARDVFEKMP-T 410
Query: 377 ANAAIWGSLLAASNIYGD 394
N W S++ A ++G+
Sbjct: 411 RNVVSWSSMINAFAMHGE 428
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 144/292 (49%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR L + ++S + S G D A IF D+ + T I A ++D+P A
Sbjct: 276 MSVRNLFVSTAMVSGY----SKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEA 331
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ ++ S ++PD + V+ A V L T++ + +H T GL+S + + ALI M
Sbjct: 332 LRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINM 391
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + AR VF+++ R NV W++M+ +A G+ +++ +LF
Sbjct: 392 YAKCGGLDAARDVFEKMPTR--NVVSWSSMINAFAMHGEASDSLSLF------------- 436
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQY 239
AQM Q ENV+P+E+ + L C+ G VE G+ I + ++Y
Sbjct: 437 -----AQMKQ-------------ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 478
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ + ++D++ ++ + +AL+V E+M +V+ W ++++ +HG
Sbjct: 479 NITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHG 530
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/424 (42%), Positives = 269/424 (63%), Gaps = 6/424 (1%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D ++FPFVLK+ V+L ++ +G+ +H + GL D++V +LI +Y C I DA KVF
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
D +++R +V+ WN ++AGY K G ++ A A+FE M +N++SWTT+I+GY+Q +A
Sbjct: 193 DNMTIR--DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQA 250
Query: 195 ITLFRRMQVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
++LF M E+ V+P+ + +++ L ACAQL +E G IH + GLN+ + AL
Sbjct: 251 LSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALT 310
Query: 253 DMYAKSGKIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
MYAK G + A F+ N K++I W TMI A +G G +A+ F M +A ++P+
Sbjct: 311 AMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPD 370
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+ITF +LS C H GLV++G +YFN M + Y I P++E Y C+ DLLGRAG L EA KL+
Sbjct: 371 DITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLV 430
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
MP A +IWGSLLAA + ++E+ E A + L LEP N+GNY +LSN+YA GRW
Sbjct: 431 GEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQ 490
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
E K+R +++ G KK PGCS+IE++ + H F+ GDTSHP +Y L + +MK A
Sbjct: 491 EVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAG 550
Query: 491 HLQN 494
+ +
Sbjct: 551 YFPD 554
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 39/293 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +R + N LL+ + S G D A +IF ++ + T I Q+ A
Sbjct: 195 MTIRDVSSWNALLAGYTKS----GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQA 250
Query: 61 VILYNKI--QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+ L++++ + S +RP+ + VL A +LST+E GR+IH GL+S+ V+ AL
Sbjct: 251 LSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALT 310
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA C + DAR FD+L+ N+ WNTM+ YA G
Sbjct: 311 AMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG-------------------- 350
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIE 237
+A++ FR M ++PD+I LS C+ G V++G ++ ++
Sbjct: 351 -----------HGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMST 399
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT-WTTMIAGLALH 289
Y +N V + D+ ++G++ +A ++ M + + W +++A H
Sbjct: 400 TYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH 452
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/478 (41%), Positives = 284/478 (59%), Gaps = 11/478 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQ-TDNPLNAV 61
GL NNH +SR CS D YA +FT PD +LYNT KA + P ++
Sbjct: 29 GLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLSL 88
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ Y+ + + P+ ++FP +++A KL E +++H + G D + + LI +Y
Sbjct: 89 LFYSHMLQHCVTPNAFTFPSLIRAC-KLE--EEAKQLHAHVLKFGFGGDTYALNNLIHVY 145
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM-TEKNVISWTT 180
+ + DAR+VF +S NV W ++V+GY++ G ++ A +FELM +KN +SW
Sbjct: 146 FAFGSLDDARRVFCTMSDP--NVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNA 203
Query: 181 LIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+IA + + ++ EA LFRRM+VE ++ D LSAC +GA+E G WIH Y+E+
Sbjct: 204 MIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKT 263
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G+ L +IDMY K G + KA VF +K K V +W MI G A+HG G +A+ +F
Sbjct: 264 GIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLF 323
Query: 300 SRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
ME A V P+ ITF+ +L+AC H GLVE G YF M +GI+P E YGCM+DLL
Sbjct: 324 KEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLA 383
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L+EA+K++ MP +AA+ G+LL A I+G++ELGE +I+L+P NSG Y I
Sbjct: 384 RAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVI 443
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
L N+YA G+W + +RK+M D GVKK PG S IE+ V+EFVAG HP + +Y
Sbjct: 444 LGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIY 501
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 293/544 (53%), Gaps = 69/544 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL Q+ +L++ + S + YA +F P+++LYNT I+ + D +AV +Y
Sbjct: 30 GLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVY 89
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLST-IELGREIHCQTVGTGLDSDV------------ 111
++ PDN++FPFVLKA +L +G +H + TG D DV
Sbjct: 90 ASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSK 149
Query: 112 -----------------HVVA--ALIQMYASCKCIYDARKVFD---ELSLR--------- 140
+VV+ A+I Y C +A +F E+ LR
Sbjct: 150 NGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRI 209
Query: 141 -------------------------VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
V NV V ++V YAK G + AR +F+ M EK+V
Sbjct: 210 LYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDV 269
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+ W+ LI GYA P EA+ +F MQ ENV+PD AM+ SAC++LGA+ELG W
Sbjct: 270 VCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGL 329
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ + L ALID YAK G + +A +VF+ M+ K + + +I+GLA+ G A
Sbjct: 330 MDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAA 389
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+F +M + ++P+ TF+ +L C H GLV+ G RYF+ M S + + P IE YGCM+D
Sbjct: 390 FGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVD 449
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
L RAG L EA+ L+R MP EAN+ +WG+LL ++ D +L E L+ LI+LEP NSG+
Sbjct: 450 LQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGH 509
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIY+ RW+E+ KIR + G++K+PGCS++EV VHEF+ GDTSHP ++
Sbjct: 510 YVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKI 569
Query: 476 YQIL 479
Y+ L
Sbjct: 570 YEKL 573
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 33/251 (13%)
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H + + GL+ L N L+ A VF + ++ + T+I G+ +
Sbjct: 23 HCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAF 82
Query: 293 REALDMFSRMERARVKPNEITFIAILSACC------HVGLVELGRRYFNIMKSRYGIEPK 346
R+A+ +++ M + P+ TF +L AC HVGL + + + G +
Sbjct: 83 RDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLS------LHSLVIKTGFDWD 136
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA---SNIYGDVELGECALQ 403
+ ++ L + G+L +A K+ +P E N W +++ S +G+ LG
Sbjct: 137 VFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAIICGYIESGCFGEA-LGLFRGL 194
Query: 404 HLIKLEPHNSGNYAILSNIYAI-------LGRW-----NESGKIRKVMRDMGVKKM-PGC 450
+ L P ++ ++ +YA GRW ESG + V + M C
Sbjct: 195 LEMGLRPD---SFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 451 SYIEVSKRVHE 461
+E ++RV +
Sbjct: 252 GSMEEARRVFD 262
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/451 (40%), Positives = 281/451 (62%), Gaps = 2/451 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + DV + + + CQT N A++ + K++ S + D VL A
Sbjct: 124 ARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGH 183
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ + G+ IH + + + + H+ +ALI +YASC + A K+++ + + ++
Sbjct: 184 IRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRK--DLVSST 241
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
MV GYA+ AR +F+ M EK+V+SW+ +I+GYA +QPNEA++LF MQ ++P
Sbjct: 242 AMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRP 301
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
DE+ ML+ +SACA LG+++ +WIH +I+ GLN I+ + NALIDM+AK G I AL +F
Sbjct: 302 DEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIF 361
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
M K+VITWT+MI A+HG G+ AL +F +M V+PNE+TF+ +L ACCH GLV
Sbjct: 362 NEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVH 421
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR F+ M +YGIEPK E YGCM+DLLGRA +QEA L+ M N +WGSLLAA
Sbjct: 422 EGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAA 481
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
++GD++LG A + +++L+P++ G +LS IY N++ ++R VM+ GV K
Sbjct: 482 CWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKLQGVSKET 541
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
G S++++++ HEF AG +P+ D+++Q L
Sbjct: 542 GLSWMDLNEPFHEFTAGGEKYPENDKIFQKL 572
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 67/364 (18%)
Query: 74 PDNYSFPFVLKAVVK-LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P + P +L++ + + R H G D V AL+ YA+C C+ DARK
Sbjct: 67 PGPRALPALLRSAARCVGAGAYVRGAHALAFRVGSLDDGFVRTALVGAYAACGCVGDARK 126
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD +++R +V+SW ++ Y Q
Sbjct: 127 VFDGMAVR---------------------------------DVVSWGVMLDSYCQTRNYK 153
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ F +M+ V D++ + LSAC + + G+ IH+Y+ + L++ALI
Sbjct: 154 EALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALI 213
Query: 253 DM-------------------------------YAKSGKIGKALQVFENMKNKSVITWTT 281
++ YA++ K A +F+ M K V++W+
Sbjct: 214 NLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSA 273
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
MI+G A EAL +F+ M+ ++P+E+T ++++SAC ++G ++ + +K+
Sbjct: 274 MISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNN- 332
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 401
G+ + +ID+ + G + A + MP + N W S++ A ++GD + C
Sbjct: 333 GLNKILHICNALIDMFAKCGGINLALNIFNEMP-QKNVITWTSMITAFAMHGDGKSALCL 391
Query: 402 LQHL 405
+ +
Sbjct: 392 FEQM 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A IF + DV ++ I ++ P A+ L+N +Q +RPD + V+ A
Sbjct: 254 EIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISAC 313
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L +++ + IH GL+ +H+ ALI M+A C I A +F+E+ + NV
Sbjct: 314 ANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQK--NVIT 371
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W +M+ +A GD +A LFE +M+ E V
Sbjct: 372 WTSMITAFAMHGDGKSALCLFE-------------------------------QMRNEGV 400
Query: 207 KPDEIAMLAALSACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+P+E+ L L AC G V G + + ++QYG+ ++D+ ++ + +A+
Sbjct: 401 EPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAV 460
Query: 266 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ E+M +V W +++A +HG + L F+ + ++ PN +LS
Sbjct: 461 NLIESMHLRPNVPVWGSLLAACWMHGDLK--LGAFAAKKILQLDPNHDGASVLLS 513
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 9/211 (4%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL++ H+ + ID + G + A +IF + +V + + I A + +A+ L+
Sbjct: 333 GLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLF 392
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYAS 123
+++ + P+ +F +L A + GR + V G++ ++ +
Sbjct: 393 EQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGR 452
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLN----NARALFELMTEKNVISWT 179
K + +A + + + LR NV VW +++A GDL A+ + +L + N +
Sbjct: 453 AKLMQEAVNLIESMHLRP-NVPVWGSLLAACWMHGDLKLGAFAAKKILQL--DPNHDGAS 509
Query: 180 TLIAG-YAQMDQPNEAITLFRRMQVENVKPD 209
L++ Y + D N+A + M+++ V +
Sbjct: 510 VLLSKIYMKSDNLNDAQEVRDVMKLQGVSKE 540
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/470 (39%), Positives = 272/470 (57%), Gaps = 5/470 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY +F + PD +N I + + + A+ +++ L+PD ++ +L +
Sbjct: 181 AYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGR 240
Query: 89 LSTIELGREIHCQTVGTGL--DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L +LG+ +H GL S++ + AL+ MY CK + A+ +F+ + + +
Sbjct: 241 LGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRK--DTIS 298
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WNTM+AGYAKVG+L A FE M ++++SW ++IAGYAQ LF M EN+
Sbjct: 299 WNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENI 358
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
PD + ++ +SA A++GA+ G WIH ++ + + L +A IDMY K G I +A
Sbjct: 359 WPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACM 418
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF + K V WTTMI G A HG G +AL +F M+ V PN++TF+A+L+AC H G
Sbjct: 419 VFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQE-YVMPNQVTFVAVLTACSHSGF 477
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V G R FN MK RYGIEP +E YGC++DLLGR+G E + ++ MP + + +IWG++L
Sbjct: 478 VSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVL 537
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+A YG++E+ E A + L+KLEP G Y +LSNIYA GRW S KIR++M GVKK
Sbjct: 538 SACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKK 597
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
GCS + V +HEFVA D HP + + IL + +MK E+
Sbjct: 598 TAGCSSVVVDGIIHEFVAADKRHPRWIEIQSILFCLKSEMKLGTDFLLEY 647
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 194/450 (43%), Gaps = 84/450 (18%)
Query: 27 DYAYSIFTHKS-KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
D A +F H + P++Y+YNT I AL + N + YN + +S + P+ +F F+L+A
Sbjct: 82 DMAVLLFRHHTPHPNLYIYNTMISALSLSLN--QSFAFYNSLLSSCIYPNRSTFLFLLQA 139
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
LS + +IHC + TG +
Sbjct: 140 SKFLSQV---MQIHCHAIITG---------------------------------SFYYGY 163
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
+ NT++ Y + + A +F+ M + +S+ +I GYA+ EA+ M
Sbjct: 164 LQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLG 223
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL--NTIVPLNNALIDM--------- 254
+KPDE ML L C +LG +LG+ +H +IE+ GL ++ + LNNAL+DM
Sbjct: 224 LKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRI 283
Query: 255 ----------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
YAK G + A FE+M + +++W ++IAG A G
Sbjct: 284 AQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDC 343
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY-- 350
+F M + P+ +T I ++SA +G + GR I ++ KI+ +
Sbjct: 344 LMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRW---IHGWVVRMQMKIDAFLG 400
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
ID+ + G ++ A + R + E + +W +++ +G G ALQ +++
Sbjct: 401 SAFIDMYWKCGSIKRACMVFREVT-EKDVTVWTTMITGFAFHG---YGSKALQLFYEMQE 456
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+ N A+L + SG + + +R
Sbjct: 457 YVMPNQV---TFVAVLTACSHSGFVSQGLR 483
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 8/243 (3%)
Query: 159 DLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
+L+ A LF T N+ + T+I+ + N++ + + + P+ L L
Sbjct: 80 NLDMAVLLFRHHTPHPNLYIYNTMISALSL--SLNQSFAFYNSLLSSCIYPNRSTFLFLL 137
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
A L V IH + G L N L+ +Y ++ K+G A QVF+ M +
Sbjct: 138 QASKFLSQVMQ---IHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAV 194
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
++ MI G A G EAL M +KP+E T + +L C +G +LG+ +
Sbjct: 195 SFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWI 254
Query: 338 KSRYGIEPK-IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ R I+ + ++D+ + L+ A+ + + + W +++A G++E
Sbjct: 255 ERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVI-VRKDTISWNTMIAGYAKVGNLE 313
Query: 397 LGE 399
+
Sbjct: 314 IAH 316
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/461 (39%), Positives = 281/461 (60%), Gaps = 5/461 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPDNYSF 79
SS+ D A +F + DV + T + + P A ++ + + A P+ +
Sbjct: 178 SSMSLPD-ARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTL 236
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
A ++ + LGR +H V +G+ V++ AL+ M+ C C+ A+++FD + +
Sbjct: 237 VAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPI 296
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ +V W +MV+ YAK GDL NA LF+ + +N +SW+ ++A Y+Q + P EA+ +F
Sbjct: 297 K--DVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFN 354
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKS 258
M V+P + +++ LSACAQLG +++G +++ YI + + V L+NA IDM+AK
Sbjct: 355 DMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKC 414
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G +G A ++F NM++K+V++W TMI ALHG EAL +F + + + P+EIT+I +L
Sbjct: 415 GDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVL 474
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
SAC H GLV GR +F MK YGIEP+ E Y CMIDLLG+ G L+EA ++ R MP A+
Sbjct: 475 SACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGAD 534
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
A WG+LL A ++G+VE+G+CA L+ L+P +SG Y ++S IYA +W + IR V
Sbjct: 535 EAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTV 594
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
MRD GVKK PGCS IEV + HEF+A D SH + +Y L
Sbjct: 595 MRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAAL 635
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 195/433 (45%), Gaps = 78/433 (18%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSD-----YAYSIFTHKSK-PDVYLYNTTIKALCQTDN 56
V GL + SR + C+ SD +A ++ ++ P+ Y+ T ++ +
Sbjct: 56 VSGLAAHRFPASRLLAFCA---LSDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGK 112
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVA 115
P +A+ L+ ++ L D + F +KA S+ IHC G + V V
Sbjct: 113 PAHALALFRRVLRDRLPADARTIVFAVKAATTSSSP--AEAIHCVAFKRGFIGQSVLVGN 170
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
AL+ MYAS L +AR LF+ M +++V
Sbjct: 171 ALVHMYASSM---------------------------------SLPDARKLFDEMADRDV 197
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHN 234
+SWTTL+ GYA+ P+EA +F RM V P+E+ ++AA SA Q+G + LG +H
Sbjct: 198 VSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQ 257
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---- 290
+ + G+ V L NAL+DM+ K G + A ++F+ M K V +WT+M++ A G
Sbjct: 258 CVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLEN 317
Query: 291 ---------------------------LGREALDMFSRMERARVKPNEITFIAILSACCH 323
L EA+ +F+ M A V+P + T +++LSAC
Sbjct: 318 AGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQ 377
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+G +++GR ++ + +E + ID+ + G + A +L R M + N W
Sbjct: 378 LGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNME-DKNVVSWN 436
Query: 384 SLLAASNIYGDVE 396
+++ A ++G E
Sbjct: 437 TMIVAHALHGQSE 449
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/432 (41%), Positives = 265/432 (61%), Gaps = 2/432 (0%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
LSR C+ YA IF +V +NT +++ + D+P +A+ L+ +++ +
Sbjct: 50 LSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDI 109
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD+Y+ FVLKA +L + G+ +H GL S++ + ++ +YA C I ARK
Sbjct: 110 SPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARK 169
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD++ R +V WN M+A K+GD A LF M E+NV SWT++I GYAQ +
Sbjct: 170 VFDKMPQR--DVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSK 227
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EAI LF M+ + P+E+ ++A L ACA +G + LG IH++ + G + + N LI
Sbjct: 228 EAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLI 287
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY K G + A ++F+NM+ ++V++W+ MIAGLA HG +AL +F++M VKPN +
Sbjct: 288 DMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAV 347
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TFI IL AC H+G+VE GR+YF M YGI P+IE YGCM+DL RAG LQEA + +
Sbjct: 348 TFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMN 407
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP N +WG+LL ++ +V+L E A +HL KL+P N G Y +LSNIYA GRW +
Sbjct: 408 MPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDV 467
Query: 433 GKIRKVMRDMGV 444
++RK+MRD G
Sbjct: 468 ARVRKLMRDRGT 479
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 175/414 (42%), Positives = 268/414 (64%), Gaps = 2/414 (0%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
PD ++ FVLKA +KLS + G+ IH G S++ + ++ +Y C + DA +
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
F+++ R + WN ++A AK GD++ A F M KNV SWT++I+G+ Q +PNE
Sbjct: 68 FEKMPQR--DAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
AI LF +++ E V+P+E+ +++ L+ACA LG ++LG +H Y + G V + N LID
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MY K G + A +VF M+ ++V++W+ MIAGLA+HG EAL +FS M + VKPN +T
Sbjct: 186 MYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVT 245
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
FI +L AC H+GL++ GRR+F M + YG+ P+IE YGC++DL RAG L+EA + + M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P + N +WG+LL ++ +++L E A++HL +L+P N G Y ++SNIYA RW ++
Sbjct: 306 PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAA 365
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++RK+M+D GVKK G S I V+ VHEFVAGD +HP + + +I K+ +MK
Sbjct: 366 RVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMK 419
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D AY F +V + + I Q P A+ L+ K++ A+RP+ + VL
Sbjct: 90 GDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVL 149
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L ++LGR +H + +G +VHV LI MY C C+ +AR+VF E+ R
Sbjct: 150 AACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEER--T 207
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W+ M+AG A G Q EA+ LF M
Sbjct: 208 VVSWSAMIAGLAMHG-------------------------------QAEEALCLFSEMIK 236
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
VKP+ + + L AC+ +G ++ G + + YG+ + ++D+++++G +
Sbjct: 237 LGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLE 296
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALH---GLGREALDMFSRME 303
+A + +M K + + W ++ G +H L EA+ S ++
Sbjct: 297 EAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELD 341
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 33/245 (13%)
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M++ +V PD L AC +L V G+ IH ++ G + + L N ++++Y G+
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHG-----------------------------L 291
+G A+ +FE M + +TW +IA LA G
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 292 GR--EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G+ EA+D+F ++E V+PNE+T +++L+AC +G ++LG R + ++ G + +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG-RIVHEYSTKSGFKRNVHV 179
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ID+ + G L+ A ++ M E W +++A ++G E C +IKL
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLG 238
Query: 410 PHNSG 414
+G
Sbjct: 239 VKPNG 243
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/464 (41%), Positives = 270/464 (58%), Gaps = 33/464 (7%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G+ D A +F DV +N I Q A++L+ ++ + + P+ + VL
Sbjct: 209 GYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVL 268
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + + ++LG + GL S++ +V ALI MY+
Sbjct: 269 SACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYS--------------------- 307
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
K GDL AR LF+ M E++VISW +I GY M EA+ LFR M
Sbjct: 308 ------------KCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLA 355
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V+P EI L+ L +CA LGA++LG+WIH YI + + L+ +LID+YAK G I
Sbjct: 356 SGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVA 415
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A QVF+ MK KS+ +W MI GLA+HG +A ++FS+M ++PNEITF+ ILSAC H
Sbjct: 416 ARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKH 475
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+LG+++F+ M Y I PK + YGCMIDLLGRAG +EAE LL+ M + + AIWG
Sbjct: 476 AGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWG 535
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
SLL A +G VELGE + L +LEP N G Y +LSNIYA G+W++ +IR + D G
Sbjct: 536 SLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRG 595
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+KK+PGC+ IEV VHEF+ GD HP + +Y++L +++ Q+K
Sbjct: 596 MKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLK 639
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 231/398 (58%), Gaps = 6/398 (1%)
Query: 1 MIVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL LS+ I+ + S G YA S+F +P+++++N+ I+ L + +P
Sbjct: 52 IIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPA 111
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++ + ++ S + P++Y+FPF+LK+ KL++ G++IH + G SDV + +LI
Sbjct: 112 LALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLI 171
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA + +A+ VFD+ + R + + ++AGYA G ++ AR LF+ M K+V+SW
Sbjct: 172 NMYAQSGEMNNAQLVFDQSNFR--DAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSW 229
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+IAGYAQM + EA+ LF M+ NV P+E +++ LSACAQ A++LG + ++IE
Sbjct: 230 NAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIED 289
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL + + L NALIDMY+K G + A ++F++M + VI+W MI G +EAL +
Sbjct: 290 RGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALAL 349
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M + V+P EITF++IL +C H+G ++LG+ + + +IDL
Sbjct: 350 FREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTS-LIDLYA 408
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G + A ++ M ++ A+ W +++ ++G +
Sbjct: 409 KCGNIVAARQVFDGMKIKSLAS-WNAMICGLAMHGQAD 445
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 151/337 (44%), Gaps = 64/337 (18%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
LK + K +I ++IH + TGL + + ++ LI+ A
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSA-------------------- 72
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ GD++ A +LF + E N+ W ++I G + P A+ F RM
Sbjct: 73 -----------VSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMI 121
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
V+P+ L +CA+L + G+ IH ++ + G + V ++ +LI+MYA+SG++
Sbjct: 122 YSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMN 181
Query: 263 -------------------------------KALQVFENMKNKSVITWTTMIAGLALHGL 291
+A Q+F+ M K V++W MIAG A G
Sbjct: 182 NAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGR 241
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+EAL +F M +A V PNE T +++LSAC ++LG + ++ R G+ ++
Sbjct: 242 SKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDR-GLCSNLKLVN 300
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ID+ + G LQ A +L M E + W ++
Sbjct: 301 ALIDMYSKCGDLQTARELFDDM-LERDVISWNVMIGG 336
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 273/422 (64%), Gaps = 3/422 (0%)
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
L+ + ++ASA+ ++ VL A K + LG ++H + + +G+ D V AL
Sbjct: 144 LSCCSFVDMVRASAM-ATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENAL 202
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ MYA C + A +F+ + +R ++A W ++++G + G ++ AR LF+ M E++ I+
Sbjct: 203 VDMYAECGDMDAAWVLFEGMQMR--SMASWTSVISGLVRSGQVDRARDLFDHMPERDTIA 260
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WT +I GY Q+ + +A+ FR MQ+ V+ DE M++ ++ACAQLGA+E GEW Y+
Sbjct: 261 WTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMG 320
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ G+ V + NALIDMY+K G I +AL VF++M N+ TWT +I GLA++G G EA+D
Sbjct: 321 RLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAID 380
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF RM RA P+E+TF+ +L+AC H GLV+ GR +F M Y I P + YGC+ID+L
Sbjct: 381 MFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVL 440
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L+EA + +MP + N+ IWG+LLA+ +YG+ E+GE A + L++L+P NS Y
Sbjct: 441 GRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYI 500
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSN+YA RW + +IR+++ + G+KK PGCS IE++ +HEFVA D SHP +Y
Sbjct: 501 LLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYS 560
Query: 478 IL 479
L
Sbjct: 561 KL 562
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 70/352 (19%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-----IHCQTVGTGLDSDVHVV 114
AV Y ++ A RPD Y+FP +LKA + IH V G++S+ H
Sbjct: 35 AVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAA 94
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVA--VWNTMVAGYAKVGDLNNARALFELMTE 172
++LI MYA+ AR V + L A +WN +++G+ + G FEL
Sbjct: 95 SSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGR-------FEL--- 144
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
+ F M + + ++ LSAC + + LG +
Sbjct: 145 ---------------------SCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQV 183
Query: 233 HNYIEQYGLNTIVPLNNALIDMYA-------------------------------KSGKI 261
H + + G+ + NAL+DMYA +SG++
Sbjct: 184 HKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQV 243
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A +F++M + I WT MI G G R+AL+ F M+ +V+ +E T +++++AC
Sbjct: 244 DRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTAC 303
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+G +E G + I R GI+ + +ID+ + G ++ A + + M
Sbjct: 304 AQLGALETG-EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F H + D + I Q +A+ + +Q +R D ++ V+
Sbjct: 241 GQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVV 300
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L +E G G+ DV V ALI MY+ C
Sbjct: 301 TACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKC------------------- 341
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
G + A +F+ M ++ +WT +I G A + EAI +F RM
Sbjct: 342 --------------GSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLR 387
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
PDE+ + L+AC G V+ G E+ + E Y ++ V LID+ ++GK+
Sbjct: 388 ALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLK 447
Query: 263 KALQVFENMKNKSVIT-WTTMIAGLALHG 290
+AL + M K T W T++A ++G
Sbjct: 448 EALDTIDKMPMKPNSTIWGTLLASCRVYG 476
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/451 (41%), Positives = 273/451 (60%), Gaps = 4/451 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+Q N +LS F+ C SL YA IF P + L+N IK + L+
Sbjct: 36 GLNQLNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLNGPFEESFRLF 95
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ + PD Y+ +LKA L ++LG+ +H + + G + + +I++Y+SC
Sbjct: 96 SSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSC 155
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA KVFDE+ R +V VWN M+ G+ K GD++ LF M +++V+SW +I+
Sbjct: 156 GVMEDAEKVFDEMYQR--DVIVWNLMIHGFCKRGDVDMGLCLFRQMRKRSVVSWNIMISC 213
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NT 243
AQ + +EA+ LF M KPDE ++ L CA+LG+V++G+WIH+Y + GL
Sbjct: 214 LAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRD 273
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V + NAL+D Y KSG A +VF+ M K+VI+W T+I+GLAL+G G +++ M
Sbjct: 274 FVAVGNALVDFYNKSGMFETARRVFDEMPRKNVISWNTLISGLALNGNGELGVELLEEMM 333
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
V+PN+ TF+ +LS C H GL E GR M + IEPK+E YGCM+DLLGR+G +
Sbjct: 334 NEGVRPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYGCMVDLLGRSGCV 393
Query: 364 QEAEKLLRRMPFEA-NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
+EA L+R MP A NAA+WGSLL+A +GDVEL A++ LI LEP NSGNY +LSN+
Sbjct: 394 REAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNM 453
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
YA RW++ +R +MR+ VKK PG S I
Sbjct: 454 YAEEERWDKVANVRGMMREKNVKKTPGQSVI 484
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 16/252 (6%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + ++GLN + + + + + K+ A ++F+ +N ++I + MI G +L+G
Sbjct: 28 IHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLNGP 87
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
E+ +FS M+ + P+E T +L AC +G+++LG+ + G E
Sbjct: 88 FEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLV-VGFEGFSAIRI 146
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
+I+L G +++AEK+ M ++ + +W ++ GDV++G C + + K
Sbjct: 147 GVIELYSSCGVMEDAEKVFDEM-YQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRK---R 202
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IEVSKRVH 460
+ ++ I+ + A R +E+ + M D G K +P C+ ++V K +H
Sbjct: 203 SVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIH 262
Query: 461 EFVAGDTSHPDF 472
+ + DF
Sbjct: 263 SYAKSSGLYRDF 274
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 189/482 (39%), Positives = 289/482 (59%), Gaps = 10/482 (2%)
Query: 5 GLDQNNHLLSRFIDSCSS--LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GLD N LSR + CS G YA +F P + + NT IK N
Sbjct: 32 GLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIHHPTLCICNTIIKTFLVNGNFYGTFH 91
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ K+ + L PDNY+ P+VLKA L LG+ +H + GL D+ V +L+ MY+
Sbjct: 92 VFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYS 151
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C + AR VFDE+ R+ V+ W+ M++GYAKVGD+++AR F+ EK+ W +I
Sbjct: 152 VCGDVIAARHVFDEMP-RLSAVS-WSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMI 209
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+GY Q E + LFR +Q+ +V PDE ++ LSACA LGA+++G WIH Y+ + ++
Sbjct: 210 SGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIWIHRYLNRKTVS 269
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ L+ +L+DMYAK G + A ++F++M + ++ W MI+GLA+HG G AL MFS M
Sbjct: 270 LSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHGDGASALKMFSEM 329
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
E+ +KP++ITFIA+ +AC + G+ G + + M S Y IEPK E YGC++DLL RAG
Sbjct: 330 EKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGL 389
Query: 363 LQEAEKLLRRMPFEA-----NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
EA ++RR+ + W + L+A +G +L E A + L++LE H SG Y
Sbjct: 390 FGEAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQAQLAERAAKRLLRLENH-SGVYV 448
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSN+YA G+ +++ ++R +MR+ GV K PGCS +E+ V EF+AG+ +HP + ++
Sbjct: 449 LLSNLYAASGKHSDARRVRNMMRNKGVDKAPGCSSVEIDGVVSEFIAGEETHPQMEEIHS 508
Query: 478 IL 479
+L
Sbjct: 509 VL 510
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 301/482 (62%), Gaps = 39/482 (8%)
Query: 28 YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKIQASA-LRPDNYSFPFVLKA 85
YA+ +F+ KP +V+++NT I+ + N ++AV LY +++AS + PD +++PF+LKA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKA 130
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
V K++ + LG IH + +G S ++V +L+ +YA+C
Sbjct: 131 VGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC--------------------- 169
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M ++
Sbjct: 170 ------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKG 217
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+KPD +++ LSACA++GA+ LG+ H Y+ + GL + +N L+D+YA+ G++ +A
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME-RARVKPNEITFIAILSACCHV 324
+F+ M +K+ ++WT++I GLA++GLG+EA+++F ME + + P EITF+ IL AC H
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHC 337
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G+V+ G YF M Y IEP+IE +GCM+DLL RAG +++A + + +MP + N IW +
Sbjct: 338 GMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRT 397
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GV
Sbjct: 398 LLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLE 501
+K+PG S +EV RVHEF+ GD SHP D +Y L ++ +++ + + N + V E
Sbjct: 458 RKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEE 517
Query: 502 SD 503
+
Sbjct: 518 EE 519
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 185/494 (37%), Positives = 286/494 (57%), Gaps = 42/494 (8%)
Query: 1 MIVRGLDQNNHLL--------SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALC 52
MI+ G + N + L + + ++ ++YA+ +F +PD ++YN I+
Sbjct: 25 MIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSS 84
Query: 53 QTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH 112
Q+ NPL A+ LY ++ ++ D+Y+FPFVLKA +L + G +H + G S+
Sbjct: 85 QSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAV 144
Query: 113 VVAALIQMYASC------KCIYD-------------------------ARKVFDELSLRV 141
V L+ +A C ++D ARK+F+E+ R
Sbjct: 145 VRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPER- 203
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++ WN M+ GY K G++ +AR LF+ K+V+SW +IAGY +A+ LF M
Sbjct: 204 -DLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEM 262
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL-NNALIDMYAKSGK 260
V PDE+ +L+ LSACA LG +E G+ +H + + + + L NALIDMYAK G
Sbjct: 263 CRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGN 322
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
I ++L VF ++ +K VI+W ++I G+ALHG G+E+L +F M+R ++ PNEITF+ +L A
Sbjct: 323 IKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVA 382
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H G ++ G +YF++M S Y IEP I GCM+D+LGRAG L+EA K + M E NA
Sbjct: 383 CSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAI 442
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
IW +LLAA ++GDVEL + A + L + +SG+Y ++SN+YA G W+ + K+RK+M
Sbjct: 443 IWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMD 502
Query: 441 DMGVKKMPGCSYIE 454
D GV K+ G S++E
Sbjct: 503 DSGVTKIRGSSFVE 516
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 298/482 (61%), Gaps = 39/482 (8%)
Query: 28 YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKIQASAL-RPDNYSFPFVLKA 85
YA+ +F+ KP +V+++NT I+ + N ++A LY +++ S L PD +++PF++KA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
V ++ + LG IH + +G S ++V +L+ +YA+C
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC--------------------- 169
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M +
Sbjct: 170 ------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+KPD +++ LSACA++GA+ LG+ +H Y+ + GL + +N L+D+YA+ G++ +A
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHV 324
+F+ M +K+ ++WT++I GLA++G G+EA+++F ME + P EITF+ IL AC H
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 337
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G+V+ G YF M+ Y IEP+IE +GCM+DLL RAG +++A + ++ MP + N IW +
Sbjct: 338 GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GV
Sbjct: 398 LLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLE 501
KK+PG S +EV RVHEF+ GD SHP D +Y L ++ G+++ + + N + V E
Sbjct: 458 KKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEE 517
Query: 502 SD 503
+
Sbjct: 518 EE 519
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/550 (36%), Positives = 302/550 (54%), Gaps = 72/550 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DYA SIF H KP+ YN I+ L +P NA++L+ K+ +++ D ++F VLKA
Sbjct: 72 DYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKAC 131
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
++ + G ++H + +G S+ V LIQMYA+C I AR VFD + R ++
Sbjct: 132 SRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPER--SIVA 189
Query: 147 WNTMVAGYAKVGDLNNARALF-------------------------------ELMTE--- 172
WN+M++GY K G + LF EL+ E
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249
Query: 173 -----KNVISWTTLIAGYAQMDQPNEA-------------------------------IT 196
+N T+LI YA+ Q + A +
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALN 309
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LF MQ NV P+E+ M++ L +CA LGA E G+W+H YI++ + V L LID YA
Sbjct: 310 LFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYA 369
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G I ++++VF+ M K+V TWT +I GLA +G G+ AL+ FS M VKPN++TFI
Sbjct: 370 KCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIG 429
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+LSAC H LV+ GR FN M+ + IEP+IE YGCM+D+LGRAG+L+EA + + MPF
Sbjct: 430 VLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFP 489
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
NA +W +LLA+ + ++E+ E +L+H+ +LEP +SG+Y +LSN YA++GR ++ ++R
Sbjct: 490 PNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVR 549
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
++++ +KK+PGCS IE+ VHEF + D H ++ L K+ Q+K ++ N
Sbjct: 550 SLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTD 609
Query: 497 SGVLESDVAS 506
LE++ S
Sbjct: 610 DARLEAEEES 619
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 145/279 (51%), Gaps = 10/279 (3%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
++ A ++F + + ++ +I G A P+ A+ LF++M ++V+ D+ + L A
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C+++ A+ GE +H I + G + + N LI MYA G+IG A VF+ M +S++ W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
+M++G +GL E + +F ++ R++ +++T I++L AC + +E+G + S
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ G+ +ID+ + G + A KL M + + W ++++ Y + +
Sbjct: 251 K-GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG---YAQADRCK 305
Query: 400 CALQHLIKLEPHN--SGNYAILSNIY--AILGRWNESGK 434
AL +++ N ++S +Y A+LG + E+GK
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAY-ETGK 343
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 150/345 (43%), Gaps = 42/345 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ +GL +NN L + ID + G D A +F K DV ++ I Q D A
Sbjct: 248 IVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEA 307
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L++++Q + P+ + VL + L E G+ +H + V + LI
Sbjct: 308 LNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDF 367
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C I + +VF E+S + NV W ++ G A NN
Sbjct: 368 YAKCGYIDRSVEVFKEMSFK--NVFTWTALIQGLA-----NN------------------ 402
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-Y 239
G +M A+ F M +VKP+++ + LSAC+ V+ G + N + + +
Sbjct: 403 ---GEGKM-----ALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDF 454
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREA 295
+ + ++D+ ++G + +A Q +NM + + W T++A H + ++
Sbjct: 455 DIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKS 514
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
L+ +R+E A + +I + + VG VE R +++K +
Sbjct: 515 LEHITRLEPA----HSGDYILLSNTYALVGRVEDAIRVRSLIKEK 555
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 286/454 (62%), Gaps = 5/454 (1%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
K +V+ +N+ I L ++ + + A+ ++ ++ +L+P+ +FP +K+ L + GR+
Sbjct: 38 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 97
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
H Q + G + D+ V +AL+ MY+ C + DAR +FDE+S R N+ W +M+ GY +
Sbjct: 98 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR--NIVSWTSMITGYVQN 155
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAA 216
D + A +F+ M E++VISW ++IA YAQ E++ +F RM + + + + + A
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L ACA G+ LG+ IH+ + + GL + V + ++IDMY K GK+ A + F+ M+ K+V
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNV 275
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+W+ M+AG +HG +EAL++F M A VKPN ITF+++L+AC H GL+E G +F
Sbjct: 276 KSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKA 335
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
M + +EP +E YGCM+DLLGRAGYL+EA L++ M + +WG+LL A ++ +V+
Sbjct: 336 MSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVD 395
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 456
LGE + + L +L+P N G Y +LSNIYA GRW + ++R +M++ G+ K PG S +++
Sbjct: 396 LGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIK 455
Query: 457 KRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
RVH F+ GD HP +++Y+ L K++ MK E
Sbjct: 456 GRVHVFLVGDREHPQHEKIYEYLEKLS--MKLQE 487
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/496 (39%), Positives = 291/496 (58%), Gaps = 39/496 (7%)
Query: 13 LSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN-AVILYNK-IQ 68
L + I C S G DYA +F+ +P+++ +N+ I+ Q+ P VIL+ K ++
Sbjct: 94 LCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVR 153
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
P+ ++ FVLKA +S +E G+++H + +G S V AL+ YA C+ I
Sbjct: 154 RGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIV 213
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
A KVFDE++ R N+ W+TM++GYA++G +N
Sbjct: 214 LASKVFDEITDR--NLVAWSTMISGYARIGLVN--------------------------- 244
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
EA+ LFR MQ V PDE+ M++ +SACA GA++ G+W+H YI + + T + L+
Sbjct: 245 ----EALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELS 300
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
AL++MYAK G I +A +VF+ M K W++MI GLA++GL +AL+ F RME A+VK
Sbjct: 301 TALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVK 360
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PN +TFI +LSAC H GLV GRRY++ M +GI P +E YGCM+DLL RA +++A
Sbjct: 361 PNHVTFIGVLSACAHSGLVSEGRRYWSSML-EFGIVPSMELYGCMVDLLCRASLVEDACT 419
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP N IW +LL +++ E Q L++LEPHN+ NY +LSN+YA + +
Sbjct: 420 LVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQ 479
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
W + ++RK M+ MG+K +PGCS IEV VHEFV GD SHP+ + +IL I+ ++
Sbjct: 480 WEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHA 539
Query: 489 AEHLQNEFSGVLESDV 504
H Q S VL + V
Sbjct: 540 VGH-QPGISDVLHNVV 554
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 196/496 (39%), Positives = 291/496 (58%), Gaps = 39/496 (7%)
Query: 13 LSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN-AVILYNK-IQ 68
L + I C S G DYA +F+ +P+++ +N+ I+ Q+ P VIL+ K ++
Sbjct: 25 LCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVR 84
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
P+ ++ FVLKA +S +E G+++H + +G S V AL+ YA C+ I
Sbjct: 85 RGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIV 144
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
A KVFDE++ R N+ W+TM++GYA++G +N
Sbjct: 145 LASKVFDEITDR--NLVAWSTMISGYARIGLVN--------------------------- 175
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
EA+ LFR MQ V PDE+ M++ +SACA GA++ G+W+H YI + + T + L+
Sbjct: 176 ----EALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELS 231
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
AL++MYAK G I +A +VF+ M K W++MI GLA++GL +AL+ F RME A+VK
Sbjct: 232 TALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVK 291
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PN +TFI +LSAC H GLV GRRY++ M +GI P +E YGCM+DLL RA +++A
Sbjct: 292 PNHVTFIGVLSACAHSGLVSEGRRYWSSML-EFGIVPSMELYGCMVDLLCRASLVEDACT 350
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP N IW +LL +++ E Q L++LEPHN+ NY +LSN+YA + +
Sbjct: 351 LVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQ 410
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
W + ++RK M+ MG+K +PGCS IEV VHEFV GD SHP+ + +IL I+ ++
Sbjct: 411 WEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHA 470
Query: 489 AEHLQNEFSGVLESDV 504
H Q S VL + V
Sbjct: 471 VGH-QPGISDVLHNVV 485
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 179/446 (40%), Positives = 280/446 (62%), Gaps = 4/446 (0%)
Query: 25 FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
+ YA S+F P + YNT I+A +PL A++++ +++ ++ PD ++FPF LK
Sbjct: 78 LTGYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLK 137
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A L + L + +H Q G +D+ V LI +Y+ K ++ A +VF+E SL+ +V
Sbjct: 138 ACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLK--DV 195
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQV 203
+N ++ G+ KVGD + AR LF+ M ++ +SW TL+AGYAQ D +AI LF RM +
Sbjct: 196 VSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLI 255
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V+PD IA+++ALSACAQLG +E G+ IH YI+Q + L+ L+D+YAK G I
Sbjct: 256 STVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIET 315
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A ++FE+ +K++ TW ++ GL +HG G +L FSRM A +KP+ ++F+ IL C H
Sbjct: 316 AREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGH 375
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV R +F M+ Y + +++ YGCM DLLGRAG ++EA +++ RMP + +WG
Sbjct: 376 AGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWG 435
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+L I+G+VE+ E A ++++ L P + G Y+I+++IYA GRW + +IR++M
Sbjct: 436 GVLGGCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQ 495
Query: 444 VKKMPGCSYIEVSKRV-HEFVAGDTS 468
VKK PGCS ++++ V H FVAG S
Sbjct: 496 VKKNPGCSLVQLNNGVFHGFVAGSAS 521
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 290/495 (58%), Gaps = 48/495 (9%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDY-----AYSIFTHKSKPDVYLYNTTIKALCQT 54
+I+R G Q++++ + S +++ + Y + +F KP+V+L+N IK +
Sbjct: 77 LILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIEN 136
Query: 55 DNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
+ P A++LY ++ + RP+ Y++P VLKA + G ++H V GL D H++
Sbjct: 137 NEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHIL 196
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
++ I+MYAS + +AR++ D+ V V + + + F
Sbjct: 197 SSAIRMYASFGRLVEARRILDDKGGEVDAVC--------------MPDRKGCF------- 235
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
EA+ +F +MQ E ++P + + + LSACA LGA++ G WIH
Sbjct: 236 -----------------MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHT 278
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y ++ + L +L+DMYAK G+I A +VFE M NK V +W MI GLA+HG +
Sbjct: 279 YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAED 338
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+D+FS+M+ + PNEITF+ +L+AC H GLV+ G FN M+ YG+EP+IE YGC++
Sbjct: 339 AIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIV 395
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRAG L EAEK++ +P E A+WG+LL A +G+VELGE + L++LEP NSG
Sbjct: 396 DLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSG 455
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK-RVHEFVAGDTSHPDFD 473
Y +LSNIYA GRW E G++RK+M++ G+K PG S I++ + VH+F+ GD SHP
Sbjct: 456 RYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVK 515
Query: 474 RLYQILCKINGQMKF 488
+YQ+L K+ +++
Sbjct: 516 DIYQMLDKVKERLQM 530
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 304/482 (63%), Gaps = 7/482 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC-SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL + SR + C SS G +YAY +FT P++Y +NT I+ ++ P
Sbjct: 48 IIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHL 107
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ L+ + S++ P ++P V KA +L G ++H + V GL+ D + +I
Sbjct: 108 AISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIY 167
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA+ + +AR+VFDEL +V N+M+ G AK G+++ +R LF+ M + ++W
Sbjct: 168 MYANSGLLSEARRVFDELV--DLDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWN 225
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ- 238
++I+GY + + EA+ LFR+MQ E V+P E M++ LSACA LGA++ GEW+H+Y+++
Sbjct: 226 SMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRG 285
Query: 239 -YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ LN IV A+IDMY K G I KA++VFE + + W ++I GLAL+G R+A++
Sbjct: 286 HFELNVIVL--TAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLALNGYERKAIE 343
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
FS++E + +KP+ ++FI +L+AC ++G V R YF++M ++Y IEP I+ Y CM+++L
Sbjct: 344 YFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMVEVL 403
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
G+A L+EAE+L++ MP +A+ IWGSLL++ +G+VE+ + A Q + +L P ++ Y
Sbjct: 404 GQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIAKRAAQRVCELNPSDASGYL 463
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
++SN+ A ++ E+ + R +MR+ +K PGCS IE+ VHEF+AG HP +Y
Sbjct: 464 LMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIELYGEVHEFLAGGRLHPKAREIYY 523
Query: 478 IL 479
+L
Sbjct: 524 LL 525
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 298/482 (61%), Gaps = 39/482 (8%)
Query: 28 YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKIQASAL-RPDNYSFPFVLKA 85
YA+ +F+ KP +V+++NT I+ + N ++A LY +++ S L PD +++PF++KA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
V ++ + LG IH + +G S ++V +L+ +YA+C
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC--------------------- 169
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M +
Sbjct: 170 ------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+KPD +++ LSACA++GA+ LG+ +H Y+ + GL + +N L+D+YA+ G++ +A
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHV 324
+F+ M +K+ ++WT++I GLA++G G+EA+++F ME + P EITF+ IL AC H
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 337
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G+V+ G YF M+ Y IEP+IE +GCM+DLL RAG +++A + ++ MP + N IW +
Sbjct: 338 GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GV
Sbjct: 398 LLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLE 501
KK+PG S +EV RVHEF+ GD SHP D +Y L ++ G+++ + + N + V E
Sbjct: 458 KKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEE 517
Query: 502 SD 503
+
Sbjct: 518 EE 519
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 303/543 (55%), Gaps = 64/543 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I R L ++ H+ + I + S ++ A +F +P+V+L N+ I+A Q P A
Sbjct: 42 IIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQA 101
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+++++Q L DN+++PF+LKA S + + + +H GL SD++V ALI
Sbjct: 102 FFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 121 YASCKCI---------------------------------YDARKVFDELSLR---VWNV 144
Y+ C + DAR++FDE+ R WN
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 145 AV--------------------------WNTMVAGYAKVGDLNNARALFELMT--EKNVI 176
+ W+TMV GY+K GD+ AR +F+ M KNV+
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+WT +IAGYA+ EA L +M +K D A+++ L+AC + G + LG IH+ +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
++ L + + NAL+DMYAK G + KA VF ++ K +++W TM+ GL +HG G+EA+
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FSRM R ++P+++TFIA+L +C H GL++ G YF M+ Y + P++E YGC++DL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR G L+EA K+++ MP E N IWG+LL A ++ +V++ + L +L+KL+P + GNY
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
++LSNIYA W IR M+ MGV+K G S +E+ +HEF D SHP D++Y
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Query: 477 QIL 479
Q+L
Sbjct: 582 QML 584
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 77/365 (21%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L+ + K + + +++H Q + L D+H+ LI + C+ A +VF+++
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ---- 78
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
E NV +LI +AQ QP +A +F MQ
Sbjct: 79 -----------------------------EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQ 109
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ D L AC+ + + + +HN+IE+ GL++ + + NALID Y++ G +G
Sbjct: 110 RFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG 169
Query: 263 --KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
A+++FE M + ++W +M+ GL G R+A
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA------------------------- 204
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
RR F+ M R I + M+D R + +A +L +MP E N
Sbjct: 205 ----------RRLFDEMPQRDLI-----SWNTMLDGYARCREMSKAFELFEKMP-ERNTV 248
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
W +++ + GD+E+ + L N + I+ YA G E+ ++ M
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKM-PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 441 DMGVK 445
G+K
Sbjct: 308 ASGLK 312
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 291/524 (55%), Gaps = 40/524 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I + L N L + + + ++ G Y IF + +V +N I++ +A
Sbjct: 62 LIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDA 121
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++++ + PDNY++P VLKA + +G +IH V GLD ++++ L+ M
Sbjct: 122 LLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSM 181
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA----------------- 163
Y CK + AR+V DE+ R ++ WN+MVAGYA+ G N+A
Sbjct: 182 YGKCKWLDAARRVLDEMPGR--DMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAG 239
Query: 164 --------------------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ +F + EK++ISW +IA Y PNEA+ L+ +MQV
Sbjct: 240 TMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQV 299
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V+PD +++ + L AC L A LG IH Y+E+ L + L NALIDMYAK G + +
Sbjct: 300 HGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKE 359
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF+ M + V++WT+MI+ + G G++A+ +F +M + P+ I F+++L+AC H
Sbjct: 360 ARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSH 419
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ GR FN+M + YGI P IE Y CM+DLLGRAG + EA L R+MP E N +WG
Sbjct: 420 AGLVDEGRYCFNLM-AEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWG 478
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
SLL+A +Y + + A HL +L P SG Y +LSNIYA GRW + +R +M G
Sbjct: 479 SLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKG 538
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+KK+PG S +E++ V+ F+AGD SH +Y+ L + G+MK
Sbjct: 539 IKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMK 582
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 284/493 (57%), Gaps = 33/493 (6%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G++ + +++ ++ + G + A+ +F DV +N I A+
Sbjct: 248 IRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEAL 307
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+N++Q ++P++ + VL A L +E G++IH + +G +S
Sbjct: 308 AFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFES------------ 355
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
N V N +V YAK G++N+A LFE M +KNV++W +
Sbjct: 356 ---------------------NDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAI 394
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+GY+Q P+EA+ LF MQ + +KPD A+++ L ACA A+E G+ IH Y + G
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ V + L+D+YAK G + A ++FE M + V++WTTMI +HG G +AL +FS+
Sbjct: 455 ESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSK 514
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ K + I F AIL+AC H GLV+ G +YF MKS YG+ PK+E Y C++DLLGRAG
Sbjct: 515 MQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAG 574
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
+L EA +++ M E +A +WG+LL A I+ ++ELGE A +HL +L+P N+G Y +LSN
Sbjct: 575 HLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSN 634
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
IYA RW + K+RK+M++ GVKK PGCS + V + V F+ GD +HP +++Y +L
Sbjct: 635 IYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEI 694
Query: 482 INGQMKFAEHLQN 494
+ QM+ A ++ N
Sbjct: 695 LYEQMRKAGYVPN 707
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 173/334 (51%), Gaps = 35/334 (10%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ LY ++Q + + PD F V+KA S ++ GR++H + G +SDV V AL
Sbjct: 104 ALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALAS 163
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY K G L NAR +F+ M +++V+SW
Sbjct: 164 MYT---------------------------------KCGSLENARQVFDRMPKRDVVSWN 190
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+IAGY+Q QP EA+ LF MQV +KP+ +++ + CA L A+E G+ IH Y +
Sbjct: 191 AIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS 250
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G+ + V + N L++MYAK G + A ++FE M + V +W +I G +L+ EAL F
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFF 310
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+RM+ +KPN IT +++L AC H+ +E G++ R G E ++++ +
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG-YAIRSGFESNDVVGNALVNMYAK 369
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G + A KL RMP + N W ++++ + +G
Sbjct: 370 CGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHG 402
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
N + W I GY + N+A+ L+ +MQ + PD++ L+ + AC ++ G +H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
I G + V + AL MY K G + A QVF+ M + V++W +IAG + +G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
EAL +FS M+ +KPN T ++++ C H+ +E G++ + R GIE + +
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ-IHCYAIRSGIESDVLVVNGL 262
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+++ + G + A KL RMP + A W +++
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIGG 296
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 281/445 (63%), Gaps = 2/445 (0%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F + DV + + + CQT N A++L+ K++ S + PD VL A +
Sbjct: 207 VFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGHIRH 266
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ +G+ IH + + + H+ +ALI +YASC + A K+++E+ + ++ MV
Sbjct: 267 LRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRK--DLVSSTAMV 324
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
+GYA+ + AR++F+ M EK+V+SW+ +I+GY +QPNEA++LF MQ ++ DEI
Sbjct: 325 SGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEI 384
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
ML+ +SACA LG+++ +WIH +I+ GLN ++ + NALIDM+AK G I AL VF M
Sbjct: 385 TMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEM 444
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K+VITWT+MI+ A+HG G+ +L +F +M+ +PNE+TF+++L ACCH GLV GR
Sbjct: 445 PLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGR 504
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
F+ M +YGIEPK E YGCM+DLLGRA +QEA L+ M E N IWGSLLAA +
Sbjct: 505 LLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVPIWGSLLAACWM 564
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+GD++LG A + +++L+P++ G +L IY N + ++R VM+ V K G S
Sbjct: 565 HGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMKLHRVSKETGLS 624
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLY 476
++E+++ HEF AG HP+ +++
Sbjct: 625 WMELNEPFHEFAAGGEKHPESGKIF 649
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 149/302 (49%), Gaps = 16/302 (5%)
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H V TG D V AL YA+C C+ D RKVFD +++R +V W M+ Y +
Sbjct: 173 HALAVRTGALDDGFVGTALAGAYAACGCVRDTRKVFDGMAVR--DVVSWGVMLDSYCQTR 230
Query: 159 DLNNARALFELMTEKNVISWTTLIA------GYAQMDQPNEAITLFRRMQVENVKPDEIA 212
+ A LF M V+ ++A G+ + + +AI + M V ++
Sbjct: 231 NYKEALLLFAKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSY--MLVSDMIIGAHI 288
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
A +S A +E+ E ++N + + L + + A++ YA++ K+ A +F+ M
Sbjct: 289 SSALISLYASCANMEMAEKLYNEMPRKDLVS----STAMVSGYARNRKVEIARSIFDGMP 344
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
K V++W+ MI+G EAL +F+ M+ ++ +EIT ++++SAC ++G ++ +
Sbjct: 345 EKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKW 404
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+K+ G+ + +ID+ + G + A + MP + N W S+++A ++
Sbjct: 405 IHAFIKNS-GLNKVLHICNALIDMFAKCGGINLALNVFNEMPLK-NVITWTSMISAFAMH 462
Query: 393 GD 394
GD
Sbjct: 463 GD 464
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 35/266 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A SIF + DV ++ I ++ P A+ L+N +Q +R D + V+ A
Sbjct: 334 EIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISAC 393
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L +++ + IH +GL+ +H+ ALI M+A C I A VF+E+ L+ NV
Sbjct: 394 ANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLK--NVIT 451
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W +M++ +A GD ++ LF +M+ E
Sbjct: 452 WTSMISAFAMHGD-------------------------------GKSSLRLFEQMKDEGA 480
Query: 207 KPDEIAMLAALSACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+P+E+ L+ L AC G V G + + ++QYG+ ++D+ ++ + +A+
Sbjct: 481 EPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAV 540
Query: 266 QVFENMK-NKSVITWTTMIAGLALHG 290
+ E+M +V W +++A +HG
Sbjct: 541 SLIESMHLEPNVPIWGSLLAACWMHG 566
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 284/509 (55%), Gaps = 37/509 (7%)
Query: 11 HLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
H L+R SC+ + A +F P V L+N I+A A+ LY+ +
Sbjct: 47 HKLTRLYLSCNQVVL---ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHL 103
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
+RP+ Y++PFVLKA L IE G EIH GL+SDV V AL+ YA C + +A
Sbjct: 104 GVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEA 163
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA--------------------------- 163
+++F +S R +V WN M+AG + G ++A
Sbjct: 164 QRLFSSMSHR--DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ 221
Query: 164 -----RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
R +F++M +N +SW+ +I GY D EA+ +FR MQ+ + PD ML L
Sbjct: 222 CLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLP 281
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
AC+ L A++ G H Y+ G T + NALIDMY+K GKI A +VF M +++
Sbjct: 282 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 341
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W MI G +HGLG EAL +F + +KP++ITFI +LS+C H GLV GR +F+ M
Sbjct: 342 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 401
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+ I P++E CM+D+LGRAG + EA +R MPFE + IW +LL+A I+ ++ELG
Sbjct: 402 RDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELG 461
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
E + + L P ++GN+ +LSNIY+ GRW+++ IR +D G+KK+PGCS+IE++
Sbjct: 462 EEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGI 521
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMK 487
VH FV GD SH ++ + L ++ +MK
Sbjct: 522 VHAFVGGDQSHLQLSQINRKLEELLVEMK 550
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 152/329 (46%), Gaps = 46/329 (13%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L+A ++ ++ ++IH + ++D V+ L ++Y SC + AR++FDE+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP--- 70
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+VI W +I YA + AI L+ M
Sbjct: 71 ------------------------------NPSVILWNQIIRAYAWNGPFDGAIDLYHSM 100
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
V+P++ L AC+ L A+E G IH++ + +GL + V + AL+D YAK G +
Sbjct: 101 LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGIL 160
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A ++F +M ++ V+ W MIAG +L+GL +A+ + +M+ + PN T + +L C
Sbjct: 161 VEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC 220
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN--- 378
+ R+ F++M R + + MI + ++EA + R M
Sbjct: 221 ---QCLLYARKIFDVMGVRNEV-----SWSAMIGGYVASDCMKEALDIFRMMQLSGIDPD 272
Query: 379 -AAIWGSLLAASNIYGDVELGECALQHLI 406
+ G L A S++ ++ G C+ +LI
Sbjct: 273 LTTMLGVLPACSHLAA-LQHGFCSHGYLI 300
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 114/287 (39%), Gaps = 38/287 (13%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N+ + + +C L YA IF + ++ I +D A+ ++
Sbjct: 205 GICPNSSTIVGVLPTCQCLL---YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIF 261
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q S + PD + VL A L+ ++ G H + G +D + ALI MY+ C
Sbjct: 262 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 321
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I AR+VF+ + ++ WN M+ GY I G
Sbjct: 322 GKISFAREVFNRMDRH--DIVSWNAMIIGYG--------------------------IHG 353
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNT 243
EA+ LF + +KPD+I + LS+C+ G V G W + +
Sbjct: 354 LGM-----EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVP 408
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ ++D+ ++G I +A NM V W+ +++ +H
Sbjct: 409 RMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 455
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 287/477 (60%), Gaps = 3/477 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YAY IF+ P+++++N I+ P A Y ++ S + PDN +FPF++KA
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
++ + +G + H Q V G +DV+V +L+ MYA+C I A ++F ++ R +V W
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR--DVVSW 186
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+MVAGY K G + NAR +F+ M +N+ +W+ +I GYA+ + +AI LF M+ E V
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+E M++ +S+CA LGA+E GE + Y+ + + + L AL+DM+ + G I KA+ V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE + ++W+++I GLA+HG +A+ FS+M P ++TF A+LSAC H GLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E G + MK +GIEP++E YGC++D+LGRAG L EAE + +M + NA I G+LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A IY + E+ E LIK++P +SG Y +LSNIYA G+W++ +R +M++ VKK
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 448 PGCSYIEVSKRVHEFVAG-DTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
PG S IE+ ++++F G D HP+ ++ + +I G+++ + N + D
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVD 543
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L A +F + N+ + LI ++ +P++A + +M + PD I + A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+++ V +GE H+ I ++G V + N+L+ MYA G I A ++F M + V++W
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 280 TTMIAGLALHGL---GRE----------------------------ALDMFSRMERARVK 308
T+M+AG G+ RE A+D+F M+R V
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 309 PNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
NE ++++S+C H+G +E G R Y ++KS + + ++D+ R G +++A
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGT--ALVDMFWRCGDIEKAI 304
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE--PHNSGNYAILS 420
+ +P E ++ W S++ ++G +I L P + A+LS
Sbjct: 305 HVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/480 (38%), Positives = 296/480 (61%), Gaps = 6/480 (1%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIK--ALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
YA+ +F H +PD++LYNT IK A T + + + I+ L P+ YSF F K
Sbjct: 52 YAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKG 111
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ G ++ + GL++++ V ALI MY + + DARKVFD R ++
Sbjct: 112 CGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNR--DMY 169
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WN M++GYA++G ++ AR LF+ M EK+V+SWTT+I+G Q+ EA+ +F M +
Sbjct: 170 SWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKG 229
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+ P+E + ++L+ACA L A++ G W+H YI++ + L LIDMYAK G++ A
Sbjct: 230 MSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFAS 289
Query: 266 QVFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
++F + + V W MI G A+HG +EA+++F +M+ +V PN++TF+A+L+AC H
Sbjct: 290 KLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSH 349
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
VE GR YF M S Y ++P++E YGC++DLLGRAG L+EAE+++ M + AIWG
Sbjct: 350 GNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWG 409
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL+A I+ D E+GE + + +L+P++ G + +L+NIY++ G WNE+ +R+ + + G
Sbjct: 410 ALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESG 469
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
KK PGCS IE++ H+F+ GD SHP +LY L ++ ++K A ++ +L+ D
Sbjct: 470 KKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDID 529
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ LG D A +F + DV + T I Q + A+ +++ + A + P+ Y+
Sbjct: 179 ARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLA 238
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD---EL 137
L A L ++ GR +H + + ++A LI MYA C + A K+F+ L
Sbjct: 239 SSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRL 298
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
+VW WN M+ G+A G + EAI +
Sbjct: 299 KRKVWP---WNAMIGGFAVHG-------------------------------KSKEAIEV 324
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYA 256
F +M++E V P+++ +A L+AC+ VE G + + Y + + L+D+
Sbjct: 325 FEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLG 384
Query: 257 KSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
++G++ +A ++ +M V W +++ +H
Sbjct: 385 RAGRLKEAEEIISSMHLTPDVAIWGALLSACKIH 418
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/501 (38%), Positives = 287/501 (57%), Gaps = 47/501 (9%)
Query: 1 MIVRGLDQNNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++RG + L F S G + +A +F PD ++YNT I+ + P
Sbjct: 31 MVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPDRFMYNTLIRGAAHSYAPR 90
Query: 59 NAVILYNKIQ------ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH 112
+AV +Y ++ +RPD +FPFVL+A + E G ++H V G +SD
Sbjct: 91 DAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHAHVVKAGCESDAF 150
Query: 113 VVAALIQMYASC------KCIYD-------------------------ARKVFDELSLRV 141
V ALI M+A+C ++D AR++FDE ++
Sbjct: 151 VRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVK- 209
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++ WN M+ YAK+GD+ AR LF+ +++V+SW +I+GY + +A+ LF +M
Sbjct: 210 -DLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELFEQM 268
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE----QYGLNTIVPLNNALIDMYAK 257
Q KPD + ML+ LSACA G ++ G +H ++ + G +T+ L NALIDMYAK
Sbjct: 269 QAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIGPSTV--LGNALIDMYAK 326
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + AL+VF M++K+V TW ++I GLALHG EA+D+F +M + VKP+EITF+A+
Sbjct: 327 CGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKPDEITFVAV 386
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
L AC H G+V+ G YFN+M+ RY IEP ++ YGCM+D+L RAG L+EA + + M E
Sbjct: 387 LVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIEP 446
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
N IW +LL A I+G++EL E A Q L+K SG++ +LSNIYA +G W S +RK
Sbjct: 447 NPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFVLLSNIYASVGEWLGSENMRK 506
Query: 438 VMRDMGVKKMPGCSYIEVSKR 458
+M D GV K GC+ ++ S +
Sbjct: 507 LMDDSGVNKEAGCAVVDGSSK 527
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 191/475 (40%), Positives = 279/475 (58%), Gaps = 6/475 (1%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D + ++ P Y + I A + L A+ L + + A L P ++ L
Sbjct: 337 GRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASL 396
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A LS GR +H L D +V AL+ MYA AR +FD++ L +
Sbjct: 397 PACRGLSP---GRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDM-LPDPH 452
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V M+ YA +G L++AR+LF+ + K+ + W +I GY Q +PNEA+ LFRRM
Sbjct: 453 VVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLG 512
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIG 262
V+PDE+ ++ LSA AQLG VE G+W+H+Y++ + V + ALIDMY K G +G
Sbjct: 513 SGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLG 572
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A+ VF + +K ++ W MI G A+HG R+AL+MF + + P +ITFI +L+AC
Sbjct: 573 DAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACS 632
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G+VE GR +F M+ YGI+PKIE YGCM+DLLGRAG ++EA L++ M +A +W
Sbjct: 633 HSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMW 692
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
SLLAA ++ ++ LG+ +L+ NSG Y +LSNIYA +G W E ++R +M+
Sbjct: 693 VSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKAS 752
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL-QNEF 496
G++K PGCS IE+ + V+EFVAGD SHP D +Y +L K+NG +K H+ Q E
Sbjct: 753 GIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTEL 807
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 39/283 (13%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ +G D A S+F D +N I Q P A+ L+ ++ S + PD +
Sbjct: 464 ADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVV 523
Query: 81 FVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
VL AV +L T+E G+ +H + + V V ALI MY C + DA VF +
Sbjct: 524 LVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGD 583
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ ++ VWN M+ GYA GD +A+ +F
Sbjct: 584 K--DIVVWNAMINGYAMHGD-------------------------------SRKALEMFV 610
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
+ + + + P +I + L+AC+ G VE G E+ + +YG++ + ++D+ ++
Sbjct: 611 QSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRA 670
Query: 259 GKIGKALQVFENMK-NKSVITWTTMIAGLALH---GLGREALD 297
G I +A + ++MK + W +++A LH LG++ D
Sbjct: 671 GLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIAD 713
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/464 (39%), Positives = 265/464 (57%), Gaps = 35/464 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I +S G+ + A +F S DV +N I +T N A+ LY + + ++PD
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPD 196
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ V+ A + +IELGR++H G S++ +V LI +Y+
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYS------------- 243
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
K G++ A LF+ + +K+VISW TLI G+ M+ EA+
Sbjct: 244 --------------------KCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEAL 283
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALID 253
LF+ M P+++ ML+ L ACA LGA+++G WIH YI + G+ L +LID
Sbjct: 284 LLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLID 343
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G I A QVF++M +S+ +W MI G A+HG A D+FS+M + + P++IT
Sbjct: 344 MYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDIT 403
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ +LSAC H G+++LGR F M Y I PK+E YGCMIDLLG G +EA++++R M
Sbjct: 404 FVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTM 463
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P E + IW SLL A ++ +VELGE Q+LIK+EP N G+Y +LSNIYA GRW++
Sbjct: 464 PMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVA 523
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
KIR ++ D G+KK PGCS IE+ VHEF+ GD HP +Y+
Sbjct: 524 KIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYR 567
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 214/367 (58%), Gaps = 4/367 (1%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA SIF +P++ ++NT + + + A+ LY + + L P++YSFPF+LK+
Sbjct: 17 YAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCA 76
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
K + G++IH + G D D++V +LI MYA + DA KVFD S R +V +
Sbjct: 77 KSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHR--HVVSY 134
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ GYA G +NNAR LF+ ++ K+V+SW +I+GY + EA+ L++ M NVK
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PDE M+ +SACAQ G++ELG +H++IE +G + + + N LID+Y+K G++ A +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ + K VI+W T+I G L +EAL +F M R+ PN++T +++L AC H+G +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314
Query: 328 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++GR + I K G+ +ID+ + G ++ A+++ M + + W +++
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSSWNAMI 373
Query: 387 AASNIYG 393
++G
Sbjct: 374 FGFAMHG 380
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 36/272 (13%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L+ A ++FE + E N++ W T+ G+A A+ L+ M + P+ + L +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
CA+ A+ G+ IH ++ + G + + +N +LI MYA++G++ A +VF+ ++ V+++
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 280 TTMIAGLALHGL-------------------------------GREALDMFSRMERARVK 308
T +I G A G +EAL+++ M + VK
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P+E T + ++SAC G +ELGR+ + ++ +G I+ +IDL + G ++ A
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIED-HGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 369 LLRRMPFEANAAIWGSLLAAS---NIYGDVEL 397
L + + + + W +L+ N+Y + L
Sbjct: 254 LFQGLA-KKDVISWNTLIGGHTHMNLYKEALL 284
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/363 (46%), Positives = 249/363 (68%), Gaps = 5/363 (1%)
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C C+ ARK+FDE+ + NV W +MV+GY G+L+ AR LFE K+V+ WT
Sbjct: 1 MYCKCGCLSVARKIFDEMPHK--NVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWT 58
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q + +EA+ LF+ MQ++ VKPD+ ++A L+ CAQ+GA+E G WIH YI++
Sbjct: 59 AMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEK 118
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G+ + +LI+MY+K G I KAL++F ++ K TWT++I GLA++G +AL++F
Sbjct: 119 GIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELF 178
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
S+M++ P+E+TFI +LSAC H GLVE GR +FN M S Y IEPK+E YGC+IDLLGR
Sbjct: 179 SKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGR 238
Query: 360 AGYLQEAEKLLRRMPFEANAAI---WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
AG L EAE+L++++ N I +GSLL+A IY +V++GE + L+K+E +S +
Sbjct: 239 AGQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSSVH 298
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+L+NIYA GRW + ++R+ M+D+GVKK+PGCS IEV VHEF+ G+ S + +Y
Sbjct: 299 TLLANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEMREIY 358
Query: 477 QIL 479
+L
Sbjct: 359 SML 361
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 34/251 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F DV L+ I Q ++ AV L+ ++Q ++PD + +L
Sbjct: 37 GELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALL 96
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
++ +E G IH G+ D V +LI+MY+ C CI A ++F LR +
Sbjct: 97 TGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIF--CGLREKD 154
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
A W +++ G A G + ++A+ LF +M+
Sbjct: 155 TATWTSIICGLAMNG-------------------------------KTSKALELFSKMKQ 183
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
PDE+ + LSAC+ G VE G E+ ++ Y + + LID+ ++G++
Sbjct: 184 VEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAGQLD 243
Query: 263 KALQVFENMKN 273
+A ++ + + N
Sbjct: 244 EAEELIKKIVN 254
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 293/478 (61%), Gaps = 9/478 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALC-QTDNPLNAVIL 63
G+DQ L+ + ++ + YA+ + H KP ++LYN I+A + L
Sbjct: 15 GIDQTKILIEKLLE----IPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSHPQHQHQCFSL 70
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
Y+++ + P+ ++F F+ A LS+ LG+ +H + +G + D+ AL+ MY
Sbjct: 71 YSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTK 130
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
+ ARK+FD++ +R V WN M+AG+A+ GD++ A LF LM +NV+SWTT+I+
Sbjct: 131 VGTLELARKLFDQMPVR--GVPTWNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMIS 188
Query: 184 GYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
GY++ + EA+ LF RM+ E + P+ + + + A A LGA+E+G+ + Y + G
Sbjct: 189 GYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFF 248
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSR 301
+ ++NA+++MYAK GKI A +VF + + +++ +W +MI GLA+HG + L ++ +
Sbjct: 249 KNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHGECCKTLKLYDQ 308
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M P+++TF+ +L AC H G+VE GR F M + + I PK+E YGCM+DLLGRAG
Sbjct: 309 MLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAG 368
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L+EA ++++RMP + ++ IWG+LL A + + +VEL E A + L LEP N GNY ILSN
Sbjct: 369 QLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSN 428
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
IYA G+W+ K+RKVM+ + K G S+IE ++H+F+ D SHP+ + ++ +L
Sbjct: 429 IYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVEDRSHPESNEIFALL 486
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 300/560 (53%), Gaps = 74/560 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD----------YAYSIFTHKS-KPDVYLYNTTIK 49
M+ L+ N +L ++FI +CSS+ +A +F H+ + D +L N+ IK
Sbjct: 175 MLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIK 234
Query: 50 ALCQTDNPLNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLD 108
A + LY ++ ++ PD+++F + K+ I G+EIH V G
Sbjct: 235 AYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFC 294
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLR---VW----------------------- 142
D++ AL+ MYA + ARK+FDE+ R W
Sbjct: 295 LDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM 354
Query: 143 ---NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT-------------------- 179
+ A +NTM+ Y K+GD+ +AR LF+ M E++V+SWT
Sbjct: 355 IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFD 414
Query: 180 -----------TLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVE 227
+I+GY Q QP EA+ LF MQ +++PDE+ +++ L A A LGA++
Sbjct: 415 AMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALD 474
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
LG W+H ++ + L+ + ALIDMYAK G+I K+ VF+NM K +W +I A
Sbjct: 475 LGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFA 534
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
++G +EAL +F M PNEIT I +LSAC H GLVE G+R+F M+ +G+ PKI
Sbjct: 535 INGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKI 593
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
E YGCM+DLLGRAG LQEAEKL+ MP+EAN I S L A DV E L+ IK
Sbjct: 594 EHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIK 653
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT 467
+E N GNY +L N+YA RW E+ +++ +MR GVKK GCS IEV RV EFVAGD
Sbjct: 654 MEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDR 713
Query: 468 SHPDFDRLYQILCKINGQMK 487
HP ++ ++ +L ++ MK
Sbjct: 714 VHPKWEAIHSVLGQLWVHMK 733
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 188/494 (38%), Positives = 293/494 (59%), Gaps = 6/494 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI + L ++F+ C+S D YA +F + P+ +++N I+A +D P
Sbjct: 11 MIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPE 70
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A + Y ++ +S++ ++Y+FPF+L+A L + ++H + G SDV + AL+
Sbjct: 71 LAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALL 130
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+YA C I+ AR++FD + R + WN M+ GY K GD+ A +F M KNV+SW
Sbjct: 131 HVYALCGEIHCARQLFDNIPER--DAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSW 188
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T+LI+G + Q EA++L MQ + D +A+ + L+ACA LGA++ G W+H Y+
Sbjct: 189 TSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLN 248
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK--NKSVITWTTMIAGLALHGLGREAL 296
G++ + AL++MY K G + +AL VF +K K V WT MI G A+HG G EAL
Sbjct: 249 NGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEAL 308
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+ F+RM R ++PN ITF A+L AC + GLVE G+ F MK Y + P IE YGCM+DL
Sbjct: 309 EWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDL 368
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR+G L EA++L+++MP + +A IWG+LL A I+ D LG HL++++ +SG Y
Sbjct: 369 LGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRY 428
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
L+ I A G+W E+ ++R M+ +GV PG S + ++ VHEF+AG HP +++
Sbjct: 429 IQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQ 488
Query: 477 QILCKINGQMKFAE 490
L +I +++ E
Sbjct: 489 LKLKQIAERLRQDE 502
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 300/560 (53%), Gaps = 74/560 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD----------YAYSIFTHKS-KPDVYLYNTTIK 49
M+ L+ N +L ++FI +CSS+ +A +F H+ + D +L N+ IK
Sbjct: 1 MLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIK 60
Query: 50 ALCQTDNPLNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLD 108
A + LY ++ ++ PD+++F + K+ I G+EIH V G
Sbjct: 61 AYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFC 120
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLR---VW----------------------- 142
D++ AL+ MYA + ARK+FDE+ R W
Sbjct: 121 LDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM 180
Query: 143 ---NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT-------------------- 179
+ A +NTM+ Y K+GD+ +AR LF+ M E++V+SWT
Sbjct: 181 IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFD 240
Query: 180 -----------TLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVE 227
+I+GY Q QP EA+ LF MQ +++PDE+ +++ L A A LGA++
Sbjct: 241 AMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALD 300
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
LG W+H ++ + L+ + ALIDMYAK G+I K+ VF+NM K +W +I A
Sbjct: 301 LGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFA 360
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
++G +EAL +F M PNEIT I +LSAC H GLVE G+R+F M+ +G+ PKI
Sbjct: 361 INGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKI 419
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
E YGCM+DLLGRAG LQEAEKL+ MP+EAN I S L A DV E L+ IK
Sbjct: 420 EHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIK 479
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT 467
+E N GNY +L N+YA RW E+ +++ +MR GVKK GCS IEV RV EFVAGD
Sbjct: 480 MEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDR 539
Query: 468 SHPDFDRLYQILCKINGQMK 487
HP ++ ++ +L ++ MK
Sbjct: 540 VHPKWEAIHSVLGQLWVHMK 559
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 186/479 (38%), Positives = 301/479 (62%), Gaps = 16/479 (3%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTD--NPLNAVILYNKIQASA-LRPDNYSFPFVL 83
DYA+ IF + + + +NT I+ ++D L A+ L+ ++ + + P+ ++FP VL
Sbjct: 69 DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVL 128
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF------DEL 137
KA K I+ G++IH + G D V++ L++MY C + DA +F E+
Sbjct: 129 KACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREM 188
Query: 138 SL------RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
+ R V +WN M+ GY ++GD AR LF+ M +++V+SW T+I+GY+Q
Sbjct: 189 VMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFF 248
Query: 192 NEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
+A+ +FR M+ E+++P+ + +++ L A ++LG++ELGEW+H Y E G+ L +A
Sbjct: 249 KDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSA 308
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LIDMY+K G I KA+ VFE + ++VITW+ MI G A+HG +A+D F +M +A V+P+
Sbjct: 309 LIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 368
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
++ +I +L+AC H GLVE GRRYF+ M S G+EP+IE YGCM+DLLGR G L EAE+ +
Sbjct: 369 DVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFI 428
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
MP + + IW +LL A ++ +VE+G+ L+ + PH+SG Y LSN+YA G W+
Sbjct: 429 LNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 488
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
E ++R M++M ++K PGCS+I++ +HEF+ D SHP + +L +I+ +++ A
Sbjct: 489 EVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLA 547
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 51/284 (17%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE--AITLF-RRMQVENVKPDEIAMLA 215
DL+ A +F M ++N SW T+I G+++ D+ AITLF M E ++P+ +
Sbjct: 67 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPS 126
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI-- 244
L ACA+ G ++ G+ IH +YG N I
Sbjct: 127 VLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIER 186
Query: 245 --------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
V L N +ID Y + G A +F+ M+ +SV++W TMI+G + +G
Sbjct: 187 EMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNG 246
Query: 291 LGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
++A+++F M++ ++PN +T +++L A +G +ELG + ++ GI
Sbjct: 247 FFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDVL 305
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G +++A + R+P E N W +++ I+G
Sbjct: 306 GSALIDMYSKCGIIEKAIMVFERLPRE-NVITWSAMINGFAIHG 348
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 174/461 (37%), Positives = 276/461 (59%), Gaps = 9/461 (1%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G A +F S DV + T I D A+ ++ + S + P+ + V+
Sbjct: 306 GLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVV 365
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + +E+G+ +H + + + + AL+ MY C C+ DAR++FD ++ + +
Sbjct: 366 SACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK--D 423
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W +MV GYAK GDL +AR F+ KN + W+ +IAGY+Q ++P E++ LF M
Sbjct: 424 VYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMME 483
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSG 259
V P E +++ LSAC QL + LG+WIH Y + + I+PL+ NA++DMYAK G
Sbjct: 484 RGVVPIEHTLVSVLSACGQLTCLNLGDWIHQY---FVVGKIIPLSVTLENAIVDMYAKCG 540
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
I A +VF M +++I+W TMIAG A +G ++A+++F +M +PN ITF+++L+
Sbjct: 541 SIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLT 600
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GL+ GR YF+ M+ +YGI+P+ Y CM+DLLGR G L+EA KL+ MP +
Sbjct: 601 ACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCE 660
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
A WG+LL A ++G+VEL + +L++L+P +SG Y +L+N A +W++ ++R +M
Sbjct: 661 AAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLM 720
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
+D GVKK+PG S IE+ EF+ D SHP + +Y++ C
Sbjct: 721 KDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKLEC 761
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 195/424 (45%), Gaps = 73/424 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M + G+ + +SR I C+ D YA++IF +P+ +++NT I+ P+
Sbjct: 180 MTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPI 239
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A + + + D+ SF F LKA + T+ G ++C G D ++ V LI
Sbjct: 240 FAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLI 299
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
YA + G L NAR +F+ ++K+V++W
Sbjct: 300 HFYA---------------------------------ERGLLKNARQVFDESSDKDVVTW 326
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
TT+I GYA D EA+ +F M + +V+P+E+ ++A +SAC+ +G +E+G+ +H +E+
Sbjct: 327 TTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEE 386
Query: 239 YGLNTIVPLNNALIDM-------------------------------YAKSGKIGKALQV 267
+ + L+NAL+DM YAK G + A +
Sbjct: 387 KNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRF 446
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ K+ + W+ MIAG + + +E+L +F M V P E T +++LSAC + +
Sbjct: 447 FDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCL 506
Query: 328 ELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
LG +YF + K I + ++D+ + G + A ++ MP E N W +
Sbjct: 507 NLGDWIHQYFVVGKI---IPLSVTLENAIVDMYAKCGSIDAATEVFSTMP-ERNLISWNT 562
Query: 385 LLAA 388
++A
Sbjct: 563 MIAG 566
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 2/242 (0%)
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
A GDL+ A +F + + N W T+I GY +P A + F M V+ D + +
Sbjct: 202 AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFV 261
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
AL AC Q V GE ++ + + G + + + N LI YA+ G + A QVF+ +K
Sbjct: 262 FALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDK 321
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
V+TWTTMI G A H EA+++F M + V+PNE+T IA++SAC +G +E+G+R
Sbjct: 322 DVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVH 381
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
++ + + + + ++D+ + L +A +L RM + + W S++ GD
Sbjct: 382 EKVEEK-NMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK-DVYSWTSMVNGYAKCGD 439
Query: 395 VE 396
+E
Sbjct: 440 LE 441
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 192/481 (39%), Positives = 281/481 (58%), Gaps = 10/481 (2%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S ID S G A +F+ + ++ +N+ I Q A+ ++ ++ S L
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARK 132
PD + V+ A L ++ G +IH + V T D V+ AL+ MYA C + +AR+
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD +S+R NV +MV+GYA+ + AR +F MT++NV+SW LIAGY Q +
Sbjct: 306 VFDRMSIR--NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE------QYGLNTIVP 246
EA+ LFR ++ E++ P LSACA L + LG H ++ Q G + +
Sbjct: 364 EALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIF 423
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G I +VFE MK + ++W +I G A +G G EAL +F +M
Sbjct: 424 VGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCG 483
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+ +T I +L AC H GLVE GR YF M+ +G+ P + Y CM+DLLGRAG L EA
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEA 542
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ L+ MP +A +WGSLLAA ++G++E+G+ A + L++++P NSG Y +LSN+YA L
Sbjct: 543 KNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAEL 602
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW + ++RK+MR GV K PGCS+IEV RVH F+ D SHP ++Y +L + QM
Sbjct: 603 GRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQM 662
Query: 487 K 487
K
Sbjct: 663 K 663
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 162/300 (54%), Gaps = 2/300 (0%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
P++ F +L + ++ + R +H + + T ++ + LI +Y C C+ DARK+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
FD + R N WN++++ K G L+ A LF M E + SW ++++G+AQ D+ E
Sbjct: 73 FDRMPQR--NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEE 130
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
++ F +M E+ +E + +ALSACA L + +G +H + + +T V + +ALID
Sbjct: 131 SLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MY+K G + A +VF M ++++TW ++I +G EAL++F RM + ++P+E+T
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+++SAC + ++ G + + + ++D+ + + EA ++ RM
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 186/425 (43%), Gaps = 73/425 (17%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N + I + GF D A +F +PD +N+ + Q D ++ + K+
Sbjct: 79 RNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKM 138
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
+ YSF L A L + +G ++H + +DV++ +ALI MY+ C +
Sbjct: 139 HREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSV 198
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
A +VF + R N+ WN +LI Y Q
Sbjct: 199 ACAEEVFSGMIER--NLVTWN-------------------------------SLITCYEQ 225
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVP 246
+EA+ +F RM ++PDE+ + + +SACA L A++ G IH ++ +
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 247 LNNALIDMYAKSGKIGKALQVFENMK-------------------------------NKS 275
L NAL+DMYAK K+ +A +VF+ M ++
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YF 334
V++W +IAG +G EAL +F ++R + P TF +LSAC ++ + LGR+ +
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHT 405
Query: 335 NIMKSRY----GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--A 388
+++K + G E I +ID+ + G +++ ++ +M E + W +++ A
Sbjct: 406 HVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAIIVGYA 464
Query: 389 SNIYG 393
N YG
Sbjct: 465 QNGYG 469
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 174/471 (36%), Positives = 276/471 (58%), Gaps = 36/471 (7%)
Query: 2 IVRGLDQNNHLLSRFIDSCS---SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
I L + +L++ I+ C+ + + D+A+ +F D+ L+N + ++++P
Sbjct: 53 IKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPY 112
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A L+ ++ S L PD+Y+F +LKA + G +HC V GL+ ++++ LI
Sbjct: 113 LAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLI 172
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA C + AR VFDE+ + +N ++ GYA+
Sbjct: 173 NMYAECNDMNAARGVFDEMEQPC--IVSYNAIITGYARSS-------------------- 210
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
QPNEA++LFR +Q N++P ++ ML+ + +CA LGA++LG+WIH Y+++
Sbjct: 211 -----------QPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKK 259
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G + V +N ALIDM+AK G + A+ +FE M+ + W+ MI A HG G +A+ M
Sbjct: 260 KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISM 319
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M+R V+P+EITF+ +L AC H GLVE GR YF M YGI P I+ YGCM+DLLG
Sbjct: 320 FEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLG 379
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG+L EA + ++ +A +W +LL+A + +G+VE+ + ++ + +L+ + G+Y I
Sbjct: 380 RAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVI 439
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
LSN+YA +GRW + +RK+M+D GV K+PGCS +EV+ VHEF +GD H
Sbjct: 440 LSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVH 490
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 288/476 (60%), Gaps = 10/476 (2%)
Query: 12 LLSRFI-------DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
LL++F+ S SS YA SIF P + YNT I+ P+ A+ +
Sbjct: 53 LLTKFLYTLTTKAKSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFF 112
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ ++ D++SFPF LKA +L + R +HCQ + G SD++V+ +LI Y
Sbjct: 113 TQMRRLSVPLDSHSFPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVS 172
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
DA KVFDE R +V +N ++ G+ K GD+ AR LF+LM ++ +SW T+IAG
Sbjct: 173 DMSNDAYKVFDESPQR--DVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAG 230
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
A+ D EAI LF M ++PD +A+++ LSACAQLG +E G+ IH+YIE+ +
Sbjct: 231 CAKGDYCEEAIELFDFMMDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVD 290
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
L+ L+D YAK G + AL++F++ +K++ TW M+ GLA+HG G L+ FSRM
Sbjct: 291 TFLSTGLVDFYAKCGCVDIALKIFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIE 350
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
A VKP+ I+ + +L C H GLV+ R+ F+ M+S YG+ + + YGCM DLLGRAG ++
Sbjct: 351 AGVKPDGISILGVLVGCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIK 410
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
+ ++++ MP + ++W LL I+GDVE+ E A +HL++L+P + G Y+IL+N+YA
Sbjct: 411 KVMEMIKDMPRGGDMSVWSGLLGGCRIHGDVEIAEKAAKHLMELKPDDGGVYSILANVYA 470
Query: 425 ILGRWNESGKIRKVM-RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
RW + IR+ + + V K+ G S I++ HEF+AGD+ H + D++Y +L
Sbjct: 471 NAERWEDVMNIRRSLSSNRVVTKIAGFSLIQLDGVAHEFIAGDSLHSESDKIYLVL 526
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 186/478 (38%), Positives = 285/478 (59%), Gaps = 39/478 (8%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI----QASA 71
F + + G +AY +F +PD ++YNT I+ T P +AV LY ++
Sbjct: 48 FASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGG 107
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC------K 125
+RPD +FPFVL+A + + G ++H V G +SD V ALI M+ASC
Sbjct: 108 VRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAA 167
Query: 126 CIYD-------------------------ARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
++D AR +FDE ++ ++ WN M+ YAK GD+
Sbjct: 168 ALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVK--DLVSWNVMITAYAKRGDM 225
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
AR LF+ + E++V+SW +I+GY + A+ LF +MQ KPD + ML+ LSAC
Sbjct: 226 ALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSAC 285
Query: 221 AQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A G +++G+ +H+ + + + N V L NALIDMYAK G + A +VF +M++K V T
Sbjct: 286 ADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVST 345
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H G+V+ GR +FN+M+
Sbjct: 346 WNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQ 405
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+Y +EP I+ YGCM+D+LGRAG L+EA + + M E N+ IW +LL+A ++G++EL
Sbjct: 406 HKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELA 465
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 456
+ A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV K G ++++ S
Sbjct: 466 KHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFVDGS 523
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 272/449 (60%), Gaps = 3/449 (0%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q+N +LS FI C +L YA +F P++ L+N+ IK N+++L++
Sbjct: 37 LHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGPSENSLLLFS 96
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ + PD ++F +LK+ + +G+ +H + G + + +I +Y SC
Sbjct: 97 QMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCG 156
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ DA+KVFDE+ R +V VWN M+ G+ KVGD+ LF M +++V+SW ++IAG
Sbjct: 157 RMEDAKKVFDEMLDR--DVIVWNMMIRGFCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGL 214
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTI 244
Q + EA+ LFR M +PD+ ++ L CA+LGAV++GEWIH+Y E L
Sbjct: 215 EQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDF 274
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + N+L+D Y K G + A +VF M K+V++W MI+GL +G G D+F M
Sbjct: 275 ISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMIN 334
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V+PN+ TF+ +LS C H GLVE GR F M + +EPK+E +GCM+DLL R G ++
Sbjct: 335 KGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCME 394
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA L+R MP NA +WGSLL+A GDV+ ECA++ LI+LEP NSGNY +LSN+YA
Sbjct: 395 EARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYA 454
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
G+W+E K+R +M++ ++K PG S +
Sbjct: 455 EDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH +I ++ L+ + + I + K+G A VF +N +++ + +MI G +L G
Sbjct: 28 IHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGP 87
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+L +FS+M+ + P+E TF +L +C G+ + I E++
Sbjct: 88 SENSLLLFSQMKNRGIWPDEFTFAPLLKSCS--GICD---NRIGKGVHGVVIVVGFERFS 142
Query: 352 C----MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+IDL G +++A+K+ M + + +W ++ GD+E+G
Sbjct: 143 SIRIGIIDLYTSCGRMEDAKKVFDEM-LDRDVIVWNMMIRGFCKVGDIEMG 192
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/465 (39%), Positives = 265/465 (56%), Gaps = 35/465 (7%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
+ I +S G+ + A +F DV +N I +T N A+ L+ + + +R
Sbjct: 161 TALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 220
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
PD + V+ A + +IELGR++H G S++ +V ALI +Y+
Sbjct: 221 PDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYS----------- 269
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
K G+L A LFE + K+VISW TLI GY M+ E
Sbjct: 270 ----------------------KCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKE 307
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNAL 251
A+ LF+ M P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +L
Sbjct: 308 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSL 367
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMYAK G I A QVF ++ +KS+ +W MI G A+HG + D+FSRM + ++P++
Sbjct: 368 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDD 427
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
ITF+ +LSAC H G+++LGR F M Y + PK+E YGCMIDLLG +G +EAE+++
Sbjct: 428 ITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 487
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
M E + IW SLL A ++G+VELGE Q+LIK+EP N G+Y +LSNIYA GRWNE
Sbjct: 488 TMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNE 547
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
R ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 548 VANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 592
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 228/397 (57%), Gaps = 7/397 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ I+ C D YA S+F +P++ ++NT + + +P
Sbjct: 13 MIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 72
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P++Y+FPF+LK+ K + G++IH + G D D++V +L
Sbjct: 73 VSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 132
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY + DA KVFDE R +V + ++ GYA G + NA+ +F+ + K+V+S
Sbjct: 133 ISMYVQNGRLEDAHKVFDESPHR--DVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVS 190
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W +I+GYA+ EA+ LF+ M NV+PDE M+ +SACAQ G++ELG +H++I+
Sbjct: 191 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWID 250
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + + NALID+Y+K G++ A +FE + K VI+W T+I G L +EAL
Sbjct: 251 DHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALL 310
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ PN++T ++IL AC H+G +++GR + I K G+ +ID+
Sbjct: 311 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDM 370
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ G ++ A ++ + + + W +++ ++G
Sbjct: 371 YAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 406
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 63/324 (19%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R IH Q + TGL + + ++ LI+ CI FD L +
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEF-----CILSPH--FDGLPYAI-------------- 45
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
++FE + E N++ W T+ G+A P A+ L+ M + P+
Sbjct: 46 ---------SVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 96
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN-- 273
L +CA+ A + G+ IH ++ + G + + ++ +LI MY ++G++ A +VF+ +
Sbjct: 97 LLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRD 156
Query: 274 -----------------------------KSVITWTTMIAGLALHGLGREALDMFSRMER 304
K V++W MI+G A G +EAL++F M +
Sbjct: 157 VVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 216
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V+P+E T + ++SAC G +ELGR+ + + +G ++ +IDL + G L+
Sbjct: 217 TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDD-HGFGSNLKIVNALIDLYSKCGELE 275
Query: 365 EAEKLLRRMPFEANAAIWGSLLAA 388
A L +P++ + W +L+
Sbjct: 276 TACGLFEGLPYK-DVISWNTLIGG 298
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/466 (40%), Positives = 265/466 (56%), Gaps = 35/466 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I +S G+ + A +F DV +N I +T N A+ L+ ++ + +RPD
Sbjct: 206 LIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPD 265
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ V+ A + +IELGR++H G S++ +V +L+ +Y+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYS------------- 312
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
K G+L A LFE + K+VISW TLI GY M+ EA+
Sbjct: 313 --------------------KCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALID 253
LF+ M +P+++ ML+ L ACA LGA+++G WIH YI++ L +LID
Sbjct: 353 LLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLID 412
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G I A QVF ++ +KS+ +W MI G A+HG A D+FSRM + ++P++IT
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDIT 472
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ +LSAC G+++LGR F M Y I PK+E YGCMIDLLG +G +EAE+++ M
Sbjct: 473 FVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNM 532
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
E + IW SLL A I G+VELGE Q+LIK+EP N G Y +LSNIYA GRWNE
Sbjct: 533 EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVA 592
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
KIR ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y +L
Sbjct: 593 KIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 235/426 (55%), Gaps = 9/426 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ ++ C D YA S+F +P++ ++NT + + +P
Sbjct: 56 MIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 115
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P++Y+FPF+LK+ K + G++IH + G D D+ V +L
Sbjct: 116 VSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSL 175
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I +Y + DARKVFD R +V + ++ GYA G + +A+ LF+ + K+V+S
Sbjct: 176 ISVYVQNGRLEDARKVFDRSPHR--DVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVS 233
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W +I+GYA+ EA+ LF+ M N++PDE M+ +SACAQ G++ELG +H++I+
Sbjct: 234 WNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWID 293
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + + N+L+D+Y+K G++ A +FE + K VI+W T+I G L +EAL
Sbjct: 294 DHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY-GCMIDL 356
+F M R+ +PN++T ++IL AC H+G +++GR + R +ID+
Sbjct: 354 LFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDM 413
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG--DVELGECALQHLIKLEPHNSG 414
+ G ++ A ++ + + + W +++ ++G D + I +EP +
Sbjct: 414 YAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDIT 472
Query: 415 NYAILS 420
+LS
Sbjct: 473 FVGLLS 478
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 147/329 (44%), Gaps = 63/329 (19%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
T++ R IH Q + TGL + + ++ L+++ C+ FD L +
Sbjct: 45 TLQSLRLIHAQMIKTGLHNTNYALSKLLEL-----CVISPH--FDGLPYAI--------- 88
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++FE + E N++ W T+ G+A P A+ L+ M + P+
Sbjct: 89 --------------SVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNS 134
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
L +CA+ A + G+ IH ++ + G + + ++ +LI +Y ++G++ A +VF+
Sbjct: 135 YTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDR 194
Query: 271 MKN-------------------------------KSVITWTTMIAGLALHGLGREALDMF 299
+ K V++W MI+G A G +EAL++F
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELF 254
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + ++P+E T + ++SAC G +ELGR+ + + +G ++ ++DL +
Sbjct: 255 KEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDD-HGFGSNLKIVNSLMDLYSK 313
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G L+ A L + ++ + W +L+
Sbjct: 314 CGELETACGLFEGLLYK-DVISWNTLIGG 341
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/531 (35%), Positives = 298/531 (56%), Gaps = 62/531 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I L + SR +DS S + +YA +F +P+ ++ NT +K ++ P
Sbjct: 34 LITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPER 93
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ Y +++ L DNY++PFVLKA + + G + + V G DV VV LI
Sbjct: 94 ALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLIS 153
Query: 120 MYASC------KCIYD-------------------------ARKVFDELSLR---VWNVA 145
MY C + ++D A+ +FDE+ R W++
Sbjct: 154 MYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIM 213
Query: 146 V---------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+ WN+M+ GYAKVG++ AR +F+ M +KNVISW
Sbjct: 214 IDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISW 273
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+ +I GYAQ EA+ LFR+M + +KPD ++++ A+SAC+QLGA++ G WIH Y+++
Sbjct: 274 SIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKR 333
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ + + AL+DMY K G +A ++F +M ++V++W MI GL ++G G+EAL+
Sbjct: 334 NRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALEC 393
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F++ME R+ +++ F+ +L AC H LV G FN MK Y +EPK+E YGC++DLLG
Sbjct: 394 FTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLG 453
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L + + +++ MP + NAA+WGSLL A I+ +V L E ++ L +L+ +SG Y +
Sbjct: 454 RAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVL 513
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
+SNIYA +G W +IRK+M++ +KK G S IEV V EFV+G+ SH
Sbjct: 514 MSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSH 564
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/463 (39%), Positives = 264/463 (57%), Gaps = 35/463 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I +S G+ + A +F DV +N I T N A+ L+ ++ + ++PD
Sbjct: 175 LITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPD 234
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ V+ A + +I+LGR++H GL S++ +V ALI +Y+
Sbjct: 235 ESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYS------------- 281
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
K G++ A LF+ ++ K+VISW T+I GY ++ EA+
Sbjct: 282 --------------------KCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEAL 321
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALID 253
LF+ M P+++ ML+ L ACAQLGA++ G WIH YI++ G+ L +LID
Sbjct: 322 LLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLID 381
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G I A QVF +M ++++ MI G A+HG A D+FSRM + ++P++IT
Sbjct: 382 MYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 441
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ +LSAC H G+++LGRR F M Y I PK+E YGCMIDLLG G +EAE+++ M
Sbjct: 442 FVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTM 501
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
E + IW SLL A ++G+VELGE Q LIK+EP N G+Y +LSNIYA GRWNE
Sbjct: 502 TMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVA 561
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
IR ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 562 NIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 224/391 (57%), Gaps = 10/391 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LSR ++ C S F YA S+F +P++ ++NT + + +P
Sbjct: 25 MIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P++Y+FPF+LK+ KL + G++IH + G + D++V +L
Sbjct: 85 VSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSL 144
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY DA KVFD S R +V + ++ GYA G + +A+ +F+ + K+V+S
Sbjct: 145 ISMYVKNGRWKDAHKVFDGSSHR--DVVSYTALITGYASRGYIESAQKMFDEIPVKDVVS 202
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W +I+GYA EA+ LF+ M NVKPDE M+ +SACAQ G+++LG +H++I+
Sbjct: 203 WNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWID 262
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+GL + + + NALID+Y+K G++ A +F+ + NK VI+W TMI G L +EAL
Sbjct: 263 DHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALL 322
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ PN++T ++IL AC +G ++ GR + I K G+ +ID+
Sbjct: 323 LFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDM 382
Query: 357 LGRAGYLQEAEKLLRRMPFEA----NAAIWG 383
+ G ++ A ++ M NA I+G
Sbjct: 383 YAKCGDIEAAHQVFNSMHHRTLSACNAMIFG 413
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 63/329 (19%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
T++ R IH Q + TGL + + ++ L++ CI FD L +
Sbjct: 14 TLQSLRIIHAQMIKTGLHNTNYALSRLLEF-----CILSPN--FDGLPYAI--------- 57
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++FE + E N++ W T+ G+A P AI L+ M + P+
Sbjct: 58 --------------SVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNS 103
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK---------- 260
L +CA+L + G+ IH ++ + G + ++ +LI MY K+G+
Sbjct: 104 YTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDG 163
Query: 261 ---------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
I A ++F+ + K V++W +I+G A G +EALD+F
Sbjct: 164 SSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLF 223
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + VKP+E T + ++SAC G ++LGR+ + + +G+ ++ +IDL +
Sbjct: 224 KEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDD-HGLGSNLKIVNALIDLYSK 282
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G ++ A L + + + W +++
Sbjct: 283 CGEVETACGLFQGLS-NKDVISWNTMIGG 310
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/434 (41%), Positives = 256/434 (58%), Gaps = 35/434 (8%)
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
Y+ + + + P SF +L++ +LG HCQ + G + D+ + L+ YA
Sbjct: 17 FYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA 76
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV--ISWTT 180
K G + AR LF+ MTE+N ++W T
Sbjct: 77 ---------------------------------KHGYVEEARNLFDNMTERNSNSVTWNT 103
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I+ Y Q + AI++F++MQ ENVKP E+ M++ LSACA LGA+++GEWIH YI
Sbjct: 104 MISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKR 163
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L V L NALIDMY K G + A+ VF + K++ W ++I GL ++G G EA+ F
Sbjct: 164 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFI 223
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
ME+ +KP+ +TF+ ILS C H GL+ G+RYF+ M YG+EP +E YGCM+DLLGRA
Sbjct: 224 VMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRA 283
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
GYL+EA +L+R MP + N+ + GSLL A I+ D +LGE Q L++L+P + GNY LS
Sbjct: 284 GYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLS 343
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N+YA L RW++ RK+M GV K PGCS IEV+ VHEFVAGDTSHP F ++ L
Sbjct: 344 NLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLD 403
Query: 481 KINGQMKFAEHLQN 494
+I ++K H+ N
Sbjct: 404 EIAKELKGQGHVPN 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSK--PDVYLYNTTIKALCQTDNPLNAVI 62
G + + L + +D + G+ + A ++F + ++ + +NT I A Q A+
Sbjct: 60 GFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAIS 119
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ ++Q+ ++P + +L A L +++G IH L DV + ALI MY
Sbjct: 120 MFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYC 179
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C + A VF LS + N+ WN+++ G G
Sbjct: 180 KCGALEAAIDVFHGLSRK--NIFCWNSIIVGLGMNG------------------------ 213
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGL 241
+ EAI F M+ E +KPD + + LS C+ G + G+ + + YGL
Sbjct: 214 -------RGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGL 266
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
V ++D+ ++G + +AL++ M K
Sbjct: 267 EPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 299
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 292/469 (62%), Gaps = 17/469 (3%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F P L+N I+A ++ P ++ +N++ + RPD +++ F+L A
Sbjct: 79 AHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTS 138
Query: 89 LSTIELGREIHCQTVGTGL-DSDVHVVAALIQMYASC-----KCIYDARKVFDELSLRVW 142
++ G+++H + + G S+V +++ L+ YA+ + ARKVFD++S R
Sbjct: 139 SLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSER-- 196
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
NV WN+M+AGY + G+L+ AR +F M E+NV+SWTT+I+GYA+ + +A+ LF +M+
Sbjct: 197 NVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMR 256
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT----IVPLNNALIDMYAKS 258
V+ D++ +LAAL+ACA+LG +++G WIH+YI+ + + +V LNNALI MYA
Sbjct: 257 KAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYASC 316
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER---ARVKPNEITFI 315
G I +A +VF M +S ++WT++I A G + L++F M+R + +P+ ITFI
Sbjct: 317 GMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFI 376
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L AC H GLV+ GR+ F M R+GI+P+IE YGCM+DLL RAG+L EA++L+ MP
Sbjct: 377 GVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELIATMPV 436
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLI-KLEPHNSGNY-AILSNIYAILGRWNESG 433
+ N A+WG+LL Y + EL Q L+ + +P + Y ++L+ +YA +W +
Sbjct: 437 KPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVA 496
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
+R+ M MGVKK G S++++++ H+ VAGD +H + +Y++L KI
Sbjct: 497 TVRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTSSIYEMLGKI 545
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 128/269 (47%), Gaps = 41/269 (15%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L +A +F+ + + I W +I +A+ P ++I F +M + + +PD L+A
Sbjct: 76 LLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAA 135
Query: 220 CAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYA---------------------- 256
C ++ G+ +H+ + G ++ V L + L++ YA
Sbjct: 136 CTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSE 195
Query: 257 --------------KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ G + A ++F M ++V++WTTMI+G A +G ++AL++F +M
Sbjct: 196 RNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQM 255
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY-GIEPK--IEQYGCMIDLLGR 359
+A V+ +++ +A L+AC +G +++G + ++ + G + + +I +
Sbjct: 256 RKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYAS 315
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G + EA ++ R MP E +A W SL+ A
Sbjct: 316 CGMIDEAYEVFRWMP-ERSAVSWTSLITA 343
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/501 (38%), Positives = 290/501 (57%), Gaps = 13/501 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ +GLD + + R + ++ G D++ ++ P Y + I A L
Sbjct: 47 VVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPG 106
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L + + + L P ++ L A LS LGR +H L D +V AL+ M
Sbjct: 107 LALLSDMLSEGLLPTAHTLSASLPACRGLS---LGRALHAYAFKLALSGDSYVATALLSM 163
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA AR +FDE+ +V M+ YA +G L++AR LF+ + K+ I W
Sbjct: 164 YARAGDAAAARALFDEMPDP--HVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNA 221
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GY Q +PNEA+ LFRRM + +PDE+ ++ LSA AQLG VE G+W+H+Y++
Sbjct: 222 MIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKN-- 279
Query: 241 LNTIVPLN----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ V LN AL+DMY K G + A+ VF + NK ++ W MI G A+HG R+AL
Sbjct: 280 -SRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKAL 338
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+MF ++ + P +ITFI +L+AC H GLVE GR +F M+ YGI+PKIE YGCM+DL
Sbjct: 339 EMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDL 398
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG ++EA L++ + +A +W SLLAA ++ ++ LG+ L+ NSG Y
Sbjct: 399 LGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMY 458
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSNIYA +G+W E ++R +M+ G++K PGCS IE+ ++V+EFVAGD SHP D +Y
Sbjct: 459 ILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIY 518
Query: 477 QILCKINGQMKFAEHL-QNEF 496
+L K+N +K H+ Q E
Sbjct: 519 AMLDKMNALVKEHGHVPQTEL 539
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 302/485 (62%), Gaps = 8/485 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL-GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL N +R + C+S G +YAY +F P++Y +NT I+A ++ P
Sbjct: 51 IIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQF 110
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ L+ + S ++P ++P V KA +L G ++H + V GL +D + +I
Sbjct: 111 AISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIY 170
Query: 120 MYASCKCIYDARKVFDELSLRVWN--VAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
MYA+ + +AR+VFD L +++ V N+M+ GYAK G+++ +R LF+ M + +S
Sbjct: 171 MYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVS 230
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W ++I+GY + + EA+ LF +MQVE + E M++ L+ACA LGA++ G+W+H+YI+
Sbjct: 231 WNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIK 290
Query: 238 Q--YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + LN IV A+IDMY K G + A++VFE + + W ++I GLA++G REA
Sbjct: 291 RNHFELNVIVV--TAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREA 348
Query: 296 LDMFSRMERARV-KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
+ FS++E +++ KP+ ++FI +L+AC H+G + R YF +M ++Y IEP I+ Y C++
Sbjct: 349 FEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIV 408
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
D+LG+AG L+EAE+L++ MP + +A IWGSLL++ + +V++ A Q + +L P ++
Sbjct: 409 DVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDAS 468
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y ++SN++A ++ E+ + R +M++ +K PGCS IE+ VHEF+AG HP
Sbjct: 469 GYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQE 528
Query: 475 LYQIL 479
+Y +L
Sbjct: 529 IYHLL 533
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 190/507 (37%), Positives = 293/507 (57%), Gaps = 7/507 (1%)
Query: 2 IVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I GL Q++ SR + + SS G D++Y IF P + +N+ I+ + NP
Sbjct: 36 ITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTISNWNSIIRGFSKGKNPNP 95
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+V ++ K+ + PD+ ++PF+ KAV +LS + L +HC+ GL D + +LI
Sbjct: 96 SVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIH 155
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY SC I ARKVFDE+ +R N WN M+ GYAK GDL++AR +FE M +++V+SW+
Sbjct: 156 MYGSCGDIGSARKVFDEMLIR--NSVSWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWS 213
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++I G + + A+ +F RM+V K +E+ M++ L ACA LGA+E G +H Y+
Sbjct: 214 SMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSVLCACAHLGALEQGRTMHQYMVDN 273
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFEN--MKNKSVITWTTMIAGLALHGLGREALD 297
+ + L +L+DMYAK G I +A+ VF M V+ W T+I GLA HGL E+L+
Sbjct: 274 TMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLE 333
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M+ + P+EIT++ + SAC H GLV +F + + G+ PK E Y CM+D+L
Sbjct: 334 LFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSL-GKQGMVPKSEHYACMVDVL 392
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
RAG L EA + +MP E A++ G+LL + +L E + LI+LEP + G Y
Sbjct: 393 SRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYI 452
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
LSN+YA + W+ + +R+ M GVKK PG S++EV +H F+A D +H D +++Y
Sbjct: 453 GLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYM 512
Query: 478 ILCKINGQMKFAEHLQNEFSGVLESDV 504
+L I QM + + G + +V
Sbjct: 513 MLNTIVRQMMVDVDFETQERGFYDIEV 539
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 299/547 (54%), Gaps = 71/547 (12%)
Query: 28 YAYSIFTHKSKP--DVYLYNTTIKALCQTDNPLNAVILY-NKIQASALRPDNYSFPFVLK 84
YA +F P YN I++ + +P +A+ L+ + +A+ PD ++ +K
Sbjct: 120 YAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVK 179
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC-------------------- 124
+ ++ + +GR + G D V+ +LI MYASC
Sbjct: 180 SCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIA 239
Query: 125 ---------------------KCIYDARKVFDELSL--------RVW--NVAVW------ 147
K + + R FDE++L R+ N+ W
Sbjct: 240 WNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAE 299
Query: 148 -----------NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+V YAK G+L+ AR LF+ M ++V++W+ +I+GY Q D+ EA+
Sbjct: 300 EKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALA 359
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
+F MQ V P+++ M++ LSACA LGA+E G+W+H+YI + L V L AL+D YA
Sbjct: 360 IFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYA 419
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G I A++ FE+M ++ TWT +I G+A +G REAL++FS M A ++P ++TFI
Sbjct: 420 KCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIG 479
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L AC H LVE GRR+F M YGI P+IE YGCM+DLLGRAG + EA + +R MP E
Sbjct: 480 VLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIE 539
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
NA +W +LL+A ++ +VE+GE AL+ ++ L+P +SGNY +LSN YA +G+W + +R
Sbjct: 540 PNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVR 599
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
K M++ GV+K+PGCS IE+ + EF A D+ HP +Y+ + ++ +K ++ N
Sbjct: 600 KEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTA 659
Query: 497 SGVLESD 503
L+ D
Sbjct: 660 DARLDVD 666
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 38/298 (12%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+G+ ++ +L + +D + G D A +F DV ++ I Q+D A+ +
Sbjct: 301 KGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAI 360
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+N++Q + + P++ + VL A L +E G+ +H L V + AL+ YA
Sbjct: 361 FNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAK 420
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C CI DA K F+ + +R N W ++ G A G
Sbjct: 421 CGCIKDAVKAFESMPVR--NTWTWTALIKGMASNG------------------------- 453
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLN 242
+ EA+ LF M N++P ++ + L AC+ VE G + Q YG+
Sbjct: 454 ------RSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGIC 507
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREAL 296
+ ++D+ ++G I +A Q NM + + W +++ +H +G EAL
Sbjct: 508 PRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEAL 565
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 184/472 (38%), Positives = 269/472 (56%), Gaps = 33/472 (6%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ GF D A+ +F + + TI A+ ++ ++ LRPD++S
Sbjct: 154 TKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLV 213
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VL A + + G I G+ +V V AL+ Y
Sbjct: 214 EVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYG------------------ 255
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
K G++ AR++F+ M EKN++SW+++I GYA P EA+ LF +
Sbjct: 256 ---------------KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFK 300
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M E +KPD AM+ L +CA+LGA+ELG+W N I L ALIDMYAK G+
Sbjct: 301 MLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGR 360
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ +A +VF M+ K + W I+GLA+ G ++AL +F +ME++ +KP+ TF+ +L A
Sbjct: 361 MDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCA 420
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H GLVE GRRYFN M+ + + P+IE YGCM+DLLGRAG L EA +L++ MP EANA
Sbjct: 421 CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAI 480
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+WG+LL ++ D +L E L+ LI LEP +SGNY +LSNIYA +W E+ KIR +M
Sbjct: 481 VWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMS 540
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
+ GVKK+PG S+IEV VH+F+ GDTSHP +++Y L ++ +K A ++
Sbjct: 541 ERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYV 592
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 208/392 (53%), Gaps = 35/392 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD++ +LL++ + + G ++Y++ I +P+++L+NT I+ L D ++ +Y
Sbjct: 37 GLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIY 96
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ L PD+++FPFVLKA ++ ELG ++H V G ++D V +LI +Y C
Sbjct: 97 HSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKC 156
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G ++NA +F+ + +KN SWT I+G
Sbjct: 157 ---------------------------------GFIDNAFKVFDDIPDKNFASWTATISG 183
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + + EAI +FRR+ ++PD +++ LSAC + G + GEWI YI + G+
Sbjct: 184 YVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRN 243
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + AL+D Y K G + +A VF+ M K++++W++MI G A +GL +EALD+F +M
Sbjct: 244 VFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLN 303
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+KP+ + +L +C +G +ELG N++ ++ + +ID+ + G +
Sbjct: 304 EGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMD 362
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
A ++ R M + + +W + ++ + G V+
Sbjct: 363 RAWEVFRGMR-KKDRVVWNAAISGLAMSGHVK 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + + GL+ L N ++ G + ++ + K ++ + TMI GL L+
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+E+++++ M + + P+ TF +L AC V ELG + +++ + G E
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV-VKAGCEADAFVKI 147
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 400
+I+L + G++ A K+ +P + N A W + I G V +G+C
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIP-DKNFASW-----TATISGYVGVGKC 190
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
N+ L + ID + G D A+ +F K D ++N I L + + +A+ L+ ++
Sbjct: 343 DNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQM 402
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ S ++PD +F +L A +E GR + L ++ ++ + C
Sbjct: 403 EKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGC 462
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAG 153
+ +A ++ + + N VW ++ G
Sbjct: 463 LDEAHQLIKSMPMEA-NAIVWGALLGG 488
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 300/495 (60%), Gaps = 7/495 (1%)
Query: 5 GLDQNNHLLSRFI--DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL Q++ +S+ + + S+ G +Y+Y +F+ S P ++ +NT I+ + NP+ ++
Sbjct: 41 GLSQDDPFISKILCFSALSNSGDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLS 100
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ K+ + PD ++PF++KA +L E G +H + TG +SD + +LI MYA
Sbjct: 101 IFLKMLRLGVAPDYLTYPFLVKASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYA 160
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+C A+KVFD S++ NV WN+M+ GYAK G++ A+ FE M+EK+V SW++LI
Sbjct: 161 ACGNSMWAQKVFD--SIQQKNVVSWNSMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLI 218
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
GY + + +EA+ +F +MQ K +E+ M++ ACA +GA+E G I+ YI GL
Sbjct: 219 DGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLP 278
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKS--VITWTTMIAGLALHGLGREALDMFS 300
+ L +L+DMYAK G I +AL +F + V+ W +I GLA HGL E+L +F
Sbjct: 279 LTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQTDVLIWNAVIGGLATHGLVEESLKLFK 338
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M+ + P+E+T++ +L+AC H GLV+ +F + S+ G+ P E Y CM+D+L RA
Sbjct: 339 EMQIVGICPDEVTYLCLLAACAHGGLVKEAWFFFESL-SKCGMTPTSEHYACMVDVLARA 397
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L A + + +MP E A++ G+LL+ + ++ L E + LI+LEP++ G Y LS
Sbjct: 398 GQLTTAYQFICQMPTEPTASMLGALLSGCINHRNLALAEIVGRKLIELEPNHDGRYIGLS 457
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N+YA+ RW+++ +R+ M GVKK PG S++E+S +H F+A D +HPD + Y +L
Sbjct: 458 NMYAVDKRWDDARSMREAMERRGVKKSPGFSFVEISGVLHRFIAHDKTHPDSEETYFMLN 517
Query: 481 KINGQMKFAEHLQNE 495
+ QMK + H N+
Sbjct: 518 FVVYQMKLSCHEDNQ 532
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/496 (37%), Positives = 298/496 (60%), Gaps = 12/496 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFS----DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
GL+ N LSR + CSS YA +F P V +YNT IKA + +A
Sbjct: 32 GLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSA 91
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ K+ S L+PDNY+ P+VLKA G+ IH + GL D++V +L+ M
Sbjct: 92 LQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAM 151
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y + AR VFDE+ NV W+ M++GYAKVGD+++AR F+ EK+ W
Sbjct: 152 YCVFGDVVAARYVFDEIP--SLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGA 209
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I+GY Q E++ LFR MQ+ ++ PDE ++ LSACA LGA+E+G WIH ++ Q
Sbjct: 210 MISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLK 269
Query: 241 LNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
L + V L+ +L+DMYAK G + A ++F++M + V+ W MI+G+A+HG G+ AL +F
Sbjct: 270 LVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLF 329
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
ME+ VKP++ITFIA+ +AC + G+ G + M S Y I PK E YGC++DLL R
Sbjct: 330 YDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSR 389
Query: 360 AGYLQEAEKLLRRMPFEANAA----IWGSLLAASNIYGDVELGECALQHLIKLEPH-NSG 414
AG +EA ++R++ N + W + L+A +G+ +L E A + +++L+ H +SG
Sbjct: 390 AGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQLDNHIHSG 449
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y +LSN+YA G+ +++ ++R +M+ G K PGCS +E+ + EF+AG+ +HP +
Sbjct: 450 VYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVISEFIAGEKTHPQMEE 509
Query: 475 LYQILCKINGQMKFAE 490
++ +L K++ Q+ + +
Sbjct: 510 IHSVLKKMHMQLDYNQ 525
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 185/460 (40%), Positives = 277/460 (60%), Gaps = 12/460 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF + D +NT I Q L A L+ + S +R D +++ ++ V+
Sbjct: 223 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF---EESPVR-DVFTWTAMVSGYVQ 278
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVV-AALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
++ R + G+ V A+I Y CK + AR++F+ + + NV+ W
Sbjct: 279 NGMLDEARRVF-----DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ--NVSSW 331
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NTM+ GYA+ GD+ AR F+ M +++ ISW +IAGYAQ EA+ LF M+ + +
Sbjct: 332 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 391
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+ + LS CA++ A+ELG+ +H + + GL + + NAL+ MY K G I A V
Sbjct: 392 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE ++ K V++W TMIAG A HG G+EAL +F M++ + P+++T + +LSAC H GLV
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YF M YGI + Y CMIDLLGRAG L +A+ L++ MPFE +AA WG+LL
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
AS I+G+ ELGE A + + ++EP NSG Y +LSN+YA GRW + G++R MRD GVKK+
Sbjct: 572 ASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKV 631
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
PG S++EV ++H F GD+ HP+ DR+Y L +++ +MK
Sbjct: 632 PGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMK 671
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 146/365 (40%), Gaps = 68/365 (18%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + +N I D A L+ K+ L S+ ++
Sbjct: 63 GQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDL----VSWNVMI 118
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR--- 140
V+ + R + Q + DV A++ YA + +A+++FDE+ +
Sbjct: 119 SGCVRYRNLRAARLLFDQMP----ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI 174
Query: 141 --------------------------VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
W + WN M+ GY K L +AR +F+ M E++
Sbjct: 175 SWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERD 234
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG---------- 224
+SW T+I+GYAQ + EA LF V +V A +S Q G
Sbjct: 235 EVSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFD 290
Query: 225 ------AVELGEWIHNYIEQYGLNTIVPLN-----------NALIDMYAKSGKIGKALQV 267
+V I Y++ ++ L N +I YA++G I +A
Sbjct: 291 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 350
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ M + I+W +IAG A G G EAL +F M+R + N TF + LS C + +
Sbjct: 351 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 410
Query: 328 ELGRR 332
ELG++
Sbjct: 411 ELGKQ 415
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 149/321 (46%), Gaps = 46/321 (14%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I S Y AR++F+++ R ++ WN M++G + +L AR LF+ M E++V
Sbjct: 85 AMISGCLSNDKFYLARQLFEKMPTR--DLVSWNVMISGCVRYRNLRAARLLFDQMPERDV 142
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE-------- 227
+SW +++GYAQ EA +F M +N I+ L+A Q G +E
Sbjct: 143 VSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARRLFES 198
Query: 228 ------------LGEWI--HNYIEQYGLNTIVPLN-----NALIDMYAKSGKIGKALQVF 268
+G ++ + ++ G+ +P N +I YA++G++ +A ++F
Sbjct: 199 KADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF 258
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E + V TWT M++G +G+ EA +F M + N +++ AI++ ++
Sbjct: 259 EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMD 314
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
R F M + + + MI + G + +A RMP + ++ W +++A
Sbjct: 315 QARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAIIAG 368
Query: 389 SNIYGDVELGECALQHLIKLE 409
Y GE AL ++++
Sbjct: 369 ---YAQSGYGEEALHLFVEMK 386
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 20/259 (7%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A ++F+ + R + WN M++G AR LFE M ++++SW +I+G +
Sbjct: 68 ALRLFNSMPRR--SSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYR 125
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
A LF +M +V ++ A LS AQ G V+ + I + E N+I N
Sbjct: 126 NLRAARLLFDQMPERDV----VSWNAMLSGYAQNGYVKEAKEI--FDEMPCKNSISW--N 177
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
++ Y ++G+I A ++FE+ + +I+W M+ G +A +F RM +
Sbjct: 178 GMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMP----ER 233
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+E+++ ++S G + +R F R + + M+ + G L EA ++
Sbjct: 234 DEVSWNTMISGYAQNGELLEAQRLFEESPVR-----DVFTWTAMVSGYVQNGMLDEARRV 288
Query: 370 LRRMPFEANAAIWGSLLAA 388
MP E N+ W +++A
Sbjct: 289 FDGMP-EKNSVSWNAIIAG 306
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 193/523 (36%), Positives = 291/523 (55%), Gaps = 32/523 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI L+Q+ L+++FI +C+S D A S T +P+V++YN K +P+ +
Sbjct: 51 MIKTSLNQDCRLMNQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 110
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY ++ ++ P +Y++ ++KA S + H G G V + LI
Sbjct: 111 LELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFH--VKIQTTLIDF 168
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTMV 151
Y++ I +ARKVFDE+ R W N A N ++
Sbjct: 169 YSATGGIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 228
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
GY +G+L A +LF M K++ISWTT+I GY+Q + EAI +F +M E + PDE+
Sbjct: 229 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL VF N+
Sbjct: 289 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLV+ GR
Sbjct: 349 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 408
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
R + M Y I +E YG M+ L +AG + EA +L+ M FE NA IWG+LL I
Sbjct: 409 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 468
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGC 450
+ ++ + E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+ PG
Sbjct: 469 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 528
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 529 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 571
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 287/481 (59%), Gaps = 15/481 (3%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
Q+ ++ + CS+L YA IF+H P+VYLY I L + + + LY ++
Sbjct: 62 QDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQM 121
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
S+L PD+Y+ VLKA ++ GRE+H Q + GL S+ + LI++Y C
Sbjct: 122 INSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAF 181
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
DAR+VFDE+ R +V M+ Y G K+ + WT +I G +
Sbjct: 182 EDARRVFDEMPER--DVVASTVMINYYFDHGI-------------KDTVCWTAMIDGLVR 226
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
+ N A+ +FR MQ E+V P+E+ ++ LSAC++LGA++LG W+ +Y++++ + +
Sbjct: 227 NGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFV 286
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
ALI+MY++ G I +A +VFE MK K+VIT+ +MI G ALHG EA+++F + +
Sbjct: 287 GGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGF 346
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
P+ +TF+ +L+AC H GL ELG F+ M YGIEP+IE YGCM+DLLGR G L+EA
Sbjct: 347 TPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAY 406
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 427
+R M + + G+LL+A I+G++EL E + L+ + +SG Y +LSN Y+ G
Sbjct: 407 SFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSG 466
Query: 428 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+W E+ ++R MR+ G++K PGCS IEV+ +HEF+ GD HP +++Y+ L ++N ++
Sbjct: 467 KWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILR 526
Query: 488 F 488
Sbjct: 527 L 527
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 186/469 (39%), Positives = 268/469 (57%), Gaps = 35/469 (7%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I +S G D A +F DV +N I + A+ L+N++ ++PD
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ VL +ELGR+IH G S++ +V ALI +Y+
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYS-------------- 256
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
K G++ A LFE + K+VISW TLI GYA ++ EA+
Sbjct: 257 -------------------KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALL 297
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDM 254
+F+ M P+++ ML+ L ACA LGA+++G WIH YI++ G+ T L +LIDM
Sbjct: 298 VFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDM 357
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
YAK G I A QVF+ + NKS+ + MI G A+HG A D+ SRM++ ++P++ITF
Sbjct: 358 YAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITF 417
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+ +LSAC H GL +LGR+ F M Y IEPK+E YGCMIDLLGR+G +EAE+L+ M
Sbjct: 418 VGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMT 477
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
E + IWGSLL A I+ ++ELGE Q L+K+EP N G+Y +LSNIYA RW++ +
Sbjct: 478 MEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVAR 537
Query: 435 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
+R ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y++L +I+
Sbjct: 538 VRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEID 586
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 221/387 (57%), Gaps = 10/387 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL N+ LS+ +D C + YA S+F +P+ +NT I+ + +P++A+
Sbjct: 4 GLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISAL 63
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY + + L P++Y+FPF+ K+ K + G++IH Q + GL D+HV +LI MY
Sbjct: 64 NLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMY 123
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A + DA KVFD S R +V + M+ GYA G+++ A+ +F+ + K+V+SW +
Sbjct: 124 AQNGIVEDAHKVFDTSSHR--DVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAM 181
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+GYA++ + EA+ LF M +VKPDE M LS C G VELG IH++I+ +G
Sbjct: 182 ISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGF 241
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + L NALID+Y+K G++ +A +FE ++ K VI+W T+I G A +EAL +F
Sbjct: 242 GSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQE 301
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M + PN++T ++IL AC H+G +++GR + I K GI +ID+ +
Sbjct: 302 MLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKC 361
Query: 361 GYLQEA----EKLLRRMPFEANAAIWG 383
G ++ A + +L + NA I+G
Sbjct: 362 GNIEAANQVFDTILNKSLSSCNAMIFG 388
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 287/499 (57%), Gaps = 46/499 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +GL Q++ L+S+F+ C+SL Y S+F S P L+NT IK + +
Sbjct: 48 IIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLT 107
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ +++ S PD +++P ++KA K+ ++ G H V G+ DV V+ +LI +
Sbjct: 108 VSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDL 167
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTMV 151
Y C I ARKVFDE+ R W N WN ++
Sbjct: 168 YGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAII 227
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-----------DQPNEAIT---- 196
+GY K GDL +AR +F+ M +NV+S+TT+I GYA+ + P +
Sbjct: 228 SGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSA 287
Query: 197 -LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT-IVPLNNALIDM 254
+FR NVKPDE M++ +SAC+Q+G++EL +W+ +Y+ + ++ + ALIDM
Sbjct: 288 LIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDM 347
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
AK G + +A ++FE M + +I++ +M+ GL++HG G +A+ +FSRM + P+++ F
Sbjct: 348 NAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAF 407
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
IL+AC GLV+ G YF MK+ Y I P + Y CM+DLLGRAG L+EA +LL+ MP
Sbjct: 408 TVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMP 467
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
E +A WG+LL A ++ D+ELGE L +LEP N+GNY +LSNIYA +W +
Sbjct: 468 VEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSL 527
Query: 435 IRKVMRDMGVKKMPGCSYI 453
+R MR+ G++K+PGCS+I
Sbjct: 528 LRNKMRERGIRKIPGCSWI 546
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 179/469 (38%), Positives = 286/469 (60%), Gaps = 5/469 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S+ G DY+Y +F+ S P ++ +N I+ + NP++++ ++ K+ + PD ++P
Sbjct: 59 SNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYP 118
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
F++KA +LS + G +H Q + TG +SD + +LI MYASC I A KVF+ S++
Sbjct: 119 FLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFE--SMQ 176
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N+ WN+M+ GYAK G++ A+ +FE M E++V SW++ I GY + + EA+ +F +
Sbjct: 177 GKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEK 236
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M+ K +E+ M++ LSACA LGA++ G +H YI L + L +L+DMYAK G
Sbjct: 237 MRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGA 296
Query: 261 IGKALQVFENMKNKS--VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
I +AL VF + V W MI GLA HGL E+L +F M+ A ++ +EIT++ +L
Sbjct: 297 IEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLL 356
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+AC H GLV+ +F + R G+ P E Y CM+D+L RAG L A + + ++P E
Sbjct: 357 AACAHGGLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPT 415
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
A++ G++ + + + +L E + LI+L+P+N G Y LSN+YA++ RW++S +R+
Sbjct: 416 ASMLGAIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREA 475
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
M GVKK PG S++E+S+ H F+A D +HPD D Y +L + QMK
Sbjct: 476 MERRGVKKSPGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVVCQMK 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 8 QNNHLLS--RFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
Q +L+S +D + G A +F + DV +++ I + A+ ++
Sbjct: 176 QGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFE 235
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
K++A + + + VL A L ++ GR +H + L + + +L+ MYA C
Sbjct: 236 KMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCG 295
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
I +A VF +S +V +WN M+ G A G L E
Sbjct: 296 AIEEALFVFRGISKSQTDVFIWNAMIGGLATHG-------LVE----------------- 331
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
E++ LF+ MQ+ ++ DEI L L+ACA G V+ W N+ E +
Sbjct: 332 -------ESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEA-W--NFFESLVKRGMT 381
Query: 246 PLNN---ALIDMYAKSGKIGKALQ 266
P + ++D+ A++G++ A Q
Sbjct: 382 PTSEHYACMVDVLARAGQLTTAYQ 405
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 193/523 (36%), Positives = 291/523 (55%), Gaps = 32/523 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI L+Q+ L+++FI +C+S D A S T +P+V++YN K +P+ +
Sbjct: 51 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 110
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY ++ ++ P +Y++ ++KA S + H G G V + LI
Sbjct: 111 LELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFH--VKIQTTLIDF 168
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTMV 151
Y++ I +ARKVFDE+ R W N A N ++
Sbjct: 169 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 228
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
GY +G+L A +LF M K++ISWTT+I GY+Q + EAI +F +M E + PDE+
Sbjct: 229 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL VF N+
Sbjct: 289 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLV+ GR
Sbjct: 349 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 408
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
R + M Y I +E YG M+ L +AG + EA +L+ M FE NA IWG+LL I
Sbjct: 409 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 468
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGC 450
+ ++ + E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+ PG
Sbjct: 469 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 528
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 529 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 571
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 286/495 (57%), Gaps = 15/495 (3%)
Query: 4 RGLDQN----NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQT----D 55
RGL+ + N L++ + C+S+ A IF SK DV ++ I Q+
Sbjct: 287 RGLETDMIVANALITMYC-KCNSV---QEAREIFDRMSKRDVISWSAMIAGYAQSGYKDK 342
Query: 56 NPLNAVI-LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
++ V L +++ + P+ +F +L+A +E GR+IH + G + D +
Sbjct: 343 ESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ 402
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
A+ MYA C IY+A +VF +++ + NV W + ++ Y K GDL++A +F M +N
Sbjct: 403 TAIFNMYAKCGSIYEAEQVFSKMANK--NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRN 460
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V+SW +IAGYAQ + L M+ E +PD + ++ L AC L +E G+ +H
Sbjct: 461 VVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHA 520
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
+ GL + + +LI MY+K G++ +A VF+ M N+ + W M+AG HG G E
Sbjct: 521 EAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLE 580
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+D+F RM + RV PNEIT A++SAC GLV+ GR F +M+ + + P+ + YGCM+
Sbjct: 581 AVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMV 640
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRAG LQEAE+ ++ MP E + ++W +LL A + +V+L E A H+++LEP +
Sbjct: 641 DLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYAS 700
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y LSNIYA GRW++S K+R+VM D G+KK G S IE+ R+H FVA D +HP+ D
Sbjct: 701 VYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDA 760
Query: 475 LYQILCKINGQMKFA 489
++ L + +MK A
Sbjct: 761 IHAELETLTKEMKEA 775
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 185/382 (48%), Gaps = 42/382 (10%)
Query: 25 FSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
F D A + +F + DV +++ I A ++P A + ++ + + P+ +F +
Sbjct: 104 FEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSI 163
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
LKA S +E GR+IH G+++DV V ALI MY+ C I A +VF +++ R
Sbjct: 164 LKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTER-- 221
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
NV W ++ A+ LN A L+E M L AG
Sbjct: 222 NVVSWTAIIQANAQHRKLNEAFELYEQM----------LQAG------------------ 253
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ P+ + ++ L++C A+ G IH++I + GL T + + NALI MY K +
Sbjct: 254 ---ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQ 310
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGL-GREALD----MFSRMERARVKPNEITFIAI 317
+A ++F+ M + VI+W+ MIAG A G +E++D + RM R V PN++TF++I
Sbjct: 311 EAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSI 370
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
L AC G +E GR+ + S+ G E + ++ + G + EAE++ +M
Sbjct: 371 LRACTAHGALEQGRQIHAEL-SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NK 428
Query: 378 NAAIWGSLLAASNIYGDVELGE 399
N W S L+ GD+ E
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAE 450
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 224/535 (41%), Gaps = 85/535 (15%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ + + + I S G A +F ++ +V + I+A Q A LY
Sbjct: 187 GMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELY 246
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + + P+ +F +L + + GR IH GL++D+ V ALI MY C
Sbjct: 247 EQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKC 306
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +AR++FD +S R +V W+ M+AGYA+ +G
Sbjct: 307 NSVQEAREIFDRMSKR--DVISWSAMIAGYAQ--------------------------SG 338
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + +E L RM+ E V P+++ ++ L AC GA+E G IH + + G
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELD 398
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT----------------------- 281
L A+ +MYAK G I +A QVF M NK+V+ WT+
Sbjct: 399 RSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT 458
Query: 282 --------MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
MIAG A +G + ++ S M+ +P+ +T I IL AC + +E G +
Sbjct: 459 RNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KL 517
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + G+E +I + + G + EA + +M A W ++LA +G
Sbjct: 518 VHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA-WNAMLAGYGQHG 576
Query: 394 D----VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM--GVKKM 447
D V+L + L+ + S N L+ + + R + R++ R M K
Sbjct: 577 DGLEAVDLFKRMLKERV------SPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMT 630
Query: 448 P-----GCSYIEVSK-----RVHEFVAGDTSHPDFDRLYQIL--CKINGQMKFAE 490
P GC + + EF+ PD + +L CK + ++ AE
Sbjct: 631 PRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAE 685
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 161/296 (54%), Gaps = 8/296 (2%)
Query: 106 GLDSDVHVVAALIQMYASCKCIYDAR---KVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
GL + + +I+ A + D + K DEL + + ++ + N+++ Y+K D+ +
Sbjct: 51 GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEI-DIYLGNSLINFYSKFEDVAS 109
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
A +F MT ++V++W+++IA YA + P +A F RM N++P+ I L+ L AC
Sbjct: 110 AEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNN 169
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
+E G IH ++ G+ T V + ALI MY+K G+I A +VF M ++V++WT +
Sbjct: 170 YSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAI 229
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I A H EA +++ +M +A + PN +TF+++L++C + GRR + + R G
Sbjct: 230 IQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISER-G 288
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVE 396
+E + +I + + +QEA ++ RM + + W +++A A + Y D E
Sbjct: 289 LETDMIVANALITMYCKCNSVQEAREIFDRMS-KRDVISWSAMIAGYAQSGYKDKE 343
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 185/460 (40%), Positives = 277/460 (60%), Gaps = 12/460 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF + D +NT I Q L A L+ + S +R D +++ ++ V+
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF---EESPVR-DVFTWTAMVSGYVQ 197
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVV-AALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
++ R + G+ V A+I Y CK + AR++F+ + + NV+ W
Sbjct: 198 NGMLDEARRVF-----DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ--NVSSW 250
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NTM+ GYA+ GD+ AR F+ M +++ ISW +IAGYAQ EA+ LF M+ + +
Sbjct: 251 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+ + LS CA++ A+ELG+ +H + + GL + + NAL+ MY K G I A V
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE ++ K V++W TMIAG A HG G+EAL +F M++ + P+++T + +LSAC H GLV
Sbjct: 371 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 430
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YF M YGI + Y CMIDLLGRAG L +A+ L++ MPFE +AA WG+LL
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
AS I+G+ ELGE A + + ++EP NSG Y +LSN+YA GRW + G++R MRD GVKK+
Sbjct: 491 ASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKV 550
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
PG S++EV ++H F GD+ HP+ DR+Y L +++ +MK
Sbjct: 551 PGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMK 590
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 114/244 (46%), Gaps = 33/244 (13%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
++ Y I DAR++F+ S W + WN M+ GY K L +AR +F+ M E++
Sbjct: 97 GMLAAYVQNGRIEDARRLFE--SKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 154
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE----- 230
+SW T+I+GYAQ + EA LF V +V A +S Q G ++
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 231 --------W---IHNYIEQYGLNTIVPLN-----------NALIDMYAKSGKIGKALQVF 268
W I Y++ ++ L N +I YA++G I +A F
Sbjct: 211 MPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFF 270
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M + I+W +IAG A G G EAL +F M+R + N TF + LS C + +E
Sbjct: 271 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 330
Query: 329 LGRR 332
LG++
Sbjct: 331 LGKQ 334
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 54/302 (17%)
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
+ DV A++ YA + +A+++FDE+ + N WN M+A Y + G + +AR LF
Sbjct: 58 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK--NSISWNGMLAAYVQNGRIEDARRLF 115
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
E + +ISW ++ GY + ++ +A +F RM + DE++
Sbjct: 116 ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVS--------------- 156
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
W N +I YA++G++ +A ++FE + V TWT M++G
Sbjct: 157 ---W-----------------NTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYV 196
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G+ EA +F M + N +++ AI++ ++ R F M + +
Sbjct: 197 QNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-----NV 247
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
+ MI + G + +A RMP + ++ W +++A Y GE AL ++
Sbjct: 248 SSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAIIAG---YAQSGYGEEALHLFVE 303
Query: 408 LE 409
++
Sbjct: 304 MK 305
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 283/470 (60%), Gaps = 8/470 (1%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L RFI + + Y + +F+ P+ +LY+ I+A + +++ LY + + +
Sbjct: 49 LLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNV 108
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P +++F + L LG ++H G +D++V +I MY + ARK
Sbjct: 109 SPVSFTFSALFSL---LKNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARK 165
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFDE+ R +V W ++ YA+ GD+++A LF + K++++WT+++ GY+Q P
Sbjct: 166 VFDEMPHR--DVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPK 223
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE--QYGLNTIVPLNNA 250
+A+ FR+M+ V DEI ++ A+SACAQLG +WI E ++G + V + +A
Sbjct: 224 KALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSA 283
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LIDMY+K G + +A VF+ MK +V ++++MI G A+HG R A+ +F M +KPN
Sbjct: 284 LIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPN 343
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+TF+ + +AC H G+VE G++ F MK YG+ P + Y CM DLLGRAG+L++A +L+
Sbjct: 344 HVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLV 403
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
+ MP E N +WG+LL AS+I+G+ ++ E A + L +LEP N GNY +LS YA+ +W+
Sbjct: 404 QTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWD 463
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKR-VHEFVAGDTSHPDFDRLYQIL 479
+ ++RK+MR+ ++K PGCS++E +HEF AGD HP+ + + + L
Sbjct: 464 DVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKAL 513
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/496 (38%), Positives = 290/496 (58%), Gaps = 46/496 (9%)
Query: 1 MIVRGLDQNNHLLSRFI--DSCSSLGFS------DYAYSIFTHKSKPDVYLYNTTIKALC 52
MIV GL N L + + + S +G + YA +F +PD +++NT I+
Sbjct: 24 MIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSS 83
Query: 53 QTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH 112
Q+ +P++AV LY ++ +++PDN++FPFVLKA KL + G +H + + G S+V
Sbjct: 84 QSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRLGFGSNVV 143
Query: 113 VVAALIQMYASC------KCIYD-------------------------ARKVFDELSLRV 141
V L+ +A C I+D ARK+FDE+ R
Sbjct: 144 VRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKR- 202
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++ WN M+ Y K G++ +AR LF+ K+++SW LI GY + EA+ LF M
Sbjct: 203 -DLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNREALELFDEM 261
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG---LNTIVPLNNALIDMYAKS 258
PDE+ ML+ LSACA LG +E GE +H I + L+T+ L NAL+DMYAK
Sbjct: 262 CGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTL--LGNALVDMYAKC 319
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G IGKA++VF +++K V++W ++I+GLA HG E+L +F M+ +V P+E+TF+ +L
Sbjct: 320 GNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVL 379
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+AC H G V+ G RYF++MK++Y IEP I GC++D+LGRAG L+EA + M E N
Sbjct: 380 AACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPN 439
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
A +W SLL A ++GDVEL + A + L+++ SG+Y +LSN+YA G W+ + +RK+
Sbjct: 440 AIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYASQGEWDGAENVRKL 499
Query: 439 MRDMGVKKMPGCSYIE 454
M D GV K G S++E
Sbjct: 500 MDDNGVTKNRGSSFVE 515
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/497 (38%), Positives = 282/497 (56%), Gaps = 49/497 (9%)
Query: 6 LDQNNHLLSRFIDSCSSL--GFS---DY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
D ++H R + SC++L G++ D+ A +F ++ DV +N I +
Sbjct: 122 FDASSH---RDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYE 178
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT----GLDSDVHVV 114
A+ L+ ++ + +RPD + V+ A + +IELGR++H G S + +V
Sbjct: 179 EALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIV 238
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
ALI +Y+ C GD+ A LFE ++ K+
Sbjct: 239 NALIDLYSKC---------------------------------GDVETAFGLFEGLSCKD 265
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V+SW TLI GY + EA+ LF+ M P+++ +L+ L ACA LGA+++G WIH
Sbjct: 266 VVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHV 325
Query: 235 YIEQY--GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
YI++ G+ L +LIDMYAK G I A QVF +M +S+ +W MI G A+HG
Sbjct: 326 YIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRA 385
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
A D+FSRM RV+P++ITF+ +LSAC H GL++LGR+ F M Y + PK+E YGC
Sbjct: 386 NAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGC 445
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
MIDLLG +G +EAE+++ MP E + IW SLL A +G++EL E Q LIK+EP N
Sbjct: 446 MIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPEN 505
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
SG+Y +LSNIYA GRW + ++R V+ G+KK+PGCS IEV VHEF+ GD HP
Sbjct: 506 SGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRR 565
Query: 473 DRLYQILCKINGQMKFA 489
+Y +L +++ Q++ A
Sbjct: 566 REIYHMLEEMDVQLEEA 582
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 217/365 (59%), Gaps = 11/365 (3%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA S+F +P++ ++NT ++ + +P++A+ +Y ++ + P++YSFPF+LK+
Sbjct: 16 YAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCA 75
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
K E GR+IH Q + G D +V +LI MYA + DARKVFD S R +V
Sbjct: 76 KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHR--DVVSC 133
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ GYA GD +AR +F+ +TE++V+SW +I GY + + EA+ LF+ M NV+
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIGK 263
PDE +++ +SACAQ G++ELG +H+++ + +G ++ + + NALID+Y+K G +
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +FE + K V++W T+I G L +EAL +F M R+ PN++T +++L AC H
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313
Query: 324 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----N 378
+G +++GR + I K G+ + +ID+ + G ++ A ++ M + + N
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 379 AAIWG 383
A I+G
Sbjct: 374 AMIFG 378
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 37/290 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + +++ ID S G + A+ +F S DV +NT I T+ A++L+
Sbjct: 230 GFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLF 289
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHC--QTVGTGLDSDVHVVAALIQMYA 122
++ S P++ + VL A L I++GR IH G+ ++ + +LI MYA
Sbjct: 290 QEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYA 349
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C I A +VF+ + R +++ WN M+ G+A G
Sbjct: 350 KCGDIEAAHQVFNSMLYR--SLSSWNAMIFGFAMHG------------------------ 383
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGL 241
+ N A LF RM+ V+PD+I + LSAC+ G ++LG I + Q Y L
Sbjct: 384 -------RANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ +ID+ SG +A ++ M + W +++ HG
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/523 (36%), Positives = 291/523 (55%), Gaps = 32/523 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI L+Q+ L+++FI +C+S D A S T +P+V++YN K +P+ +
Sbjct: 796 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 855
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY ++ ++ P +Y++ ++KA S + H G G V + LI
Sbjct: 856 LELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFH--VKIQTTLIDF 913
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTMV 151
Y++ I +ARKVFDE+ R W N A N ++
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 973
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
GY +G+L A +LF M K++ISWTT+I GY+Q + EAI +F +M E + PDE+
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 1033
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL VF N+
Sbjct: 1034 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 1093
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLV+ GR
Sbjct: 1094 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 1153
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
R + M Y I +E YG M+ L +AG + EA +L+ M FE NA IWG+LL I
Sbjct: 1154 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 1213
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGC 450
+ ++ + E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+ PG
Sbjct: 1214 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 1273
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 1274 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 1316
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 279/495 (56%), Gaps = 39/495 (7%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
IF K +V +N I++ +A++++ + + PD+Y++P VLKA
Sbjct: 1082 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 1141
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ +G +IH V GLD +V V LI MY C C+ +A +V DZ+ R +V WN++V
Sbjct: 1142 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCR--DVVSWNSLV 1199
Query: 152 AGYAKVGDLNNA-------------------------------------RALFELMTEKN 174
AG A+ G ++A + +F + K+
Sbjct: 1200 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS 1259
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
++SW +IA Y P EA+ +F +M+ V PD I++ + L AC L A+ LG IH
Sbjct: 1260 LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE 1319
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y+ + L + L NALIDMYAK G + A +VF+ MK + V++WT+MI+ ++G GR+
Sbjct: 1320 YVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRD 1379
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ +FSRM+ + P+ I F+++LSAC H GL++ GR YF +M I P+IE + CM+
Sbjct: 1380 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 1439
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRAG + EA +++MP E N +WG+LL+A +Y ++ +G A L +L P SG
Sbjct: 1440 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 1499
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y +LSNIYA GRW + +R +M+ G+KKMPG S E+ RVH F+AGD SHP +
Sbjct: 1500 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQ 1559
Query: 475 LYQILCKINGQMKFA 489
+Y+ L + G+MK A
Sbjct: 1560 IYEELDVLVGKMKEA 1574
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 92/177 (51%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++ YA G+ + R +F+ + +KNV+ + +I Y ++A+ +F+ M + PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
L A + + +G IH + + GL+ V + N LI MY K G + +A +V +
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
M + V++W +++AG A +G +AL++ ME +KP+ T ++L A + L
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCL 1242
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/484 (38%), Positives = 286/484 (59%), Gaps = 39/484 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS----DYAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
+IV GL + ++R + +C++L S +A +IF H P +++NT I A +T
Sbjct: 34 LIVSGLASHPFTVTRLL-ACAALSPSASDLPHAKTIFLHTHNPSPFMFNTIIMASSRT-- 90
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
L++V Y + + PDN++FPF++K+ T LG ++H V GLD DV VV
Sbjct: 91 -LDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRDVFVVNN 149
Query: 117 LIQMYASCKCIYDARKVFDE----LSLRVW--------------------------NVAV 146
+I +Y+S + + ARKVFDE + + W N
Sbjct: 150 MIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVS 209
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV-EN 205
WN M++GYA +N AR LF+ M +++ SW+ +++GY+Q+ NEA+ LF M +
Sbjct: 210 WNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDK 269
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+ P+E A+++A+SACAQL A+E G W+H+YI++ L V L L+DMY K G I A
Sbjct: 270 MIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAA 329
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VF M ++V +W +MIAGLAL+G G+EAL +F +M+ PN ITFIA+L+ C H G
Sbjct: 330 GVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSG 389
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
L+ GR F++M YGI+P+++ YGCM+DLLGRAG ++EA + +MP + ++ +WG+L
Sbjct: 390 LITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGAL 449
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
+ A I+G VELGE + LI LEPH+ G YA+L NI+A RW++ +R + + V
Sbjct: 450 VGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDVAMVRDLEKGRKVL 509
Query: 446 KMPG 449
K PG
Sbjct: 510 KNPG 513
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/469 (39%), Positives = 269/469 (57%), Gaps = 30/469 (6%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA+SI P+ + +N+ I+A + P A+ ++ ++ + PD YSF FVLKA
Sbjct: 62 YAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACA 121
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---VW-- 142
E GR+IH + + L +DV V LI +Y ARKV D + +R W
Sbjct: 122 AFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNS 181
Query: 143 ------------------------NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
NV WN M++GYA G + AR +F+ M K+V+SW
Sbjct: 182 LLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSW 241
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
++ YA + NE + +F M ++ +PD ++ LSACA LG++ GEW+H YI+
Sbjct: 242 NAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYID 301
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
++G+ + AL+DMY+K GKI KAL+VF + + V TW ++I GL++HGLG++AL+
Sbjct: 302 KHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALE 361
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+FS M KPN ITFI +LSAC HVGL++ R+ F +M S YGIEP IE YGCM+DLL
Sbjct: 362 IFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLL 421
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GR G +EAE+L+ +P + + + SLL A +G +E E L++ P S Y
Sbjct: 422 GRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYV 481
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
+SN+YA GRW+E+ ++R MR VKK PGCS IEV VHEF+AG+
Sbjct: 482 QMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAGE 530
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ A + +++ + T ++I A AL +F M V P++ +F +L A
Sbjct: 60 VSYAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKA 119
Query: 321 CCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
C E GR+ + MKS + +E +I++ GR+GY + A K+L RMP +A
Sbjct: 120 CAAFCGFEEGRQIHGLFMKSDLVTDVFVEN--TLINVYGRSGYFEIARKVLDRMPVR-DA 176
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
W SLL+A Y D L E A ++E N ++ + + YA G E+ R+V
Sbjct: 177 VSWNSLLSA---YLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEA---REVF 230
Query: 440 RDMGVKKM 447
M VK +
Sbjct: 231 DSMPVKDV 238
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 279/468 (59%), Gaps = 39/468 (8%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI----QASA 71
F + + G +AY +F +PD ++YNT I+ T P +AV LY ++
Sbjct: 18 FASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGG 77
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC------K 125
+RPD +FPFVL+A + + G ++H V G +SD V ALI M+ASC
Sbjct: 78 VRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAA 137
Query: 126 CIYD-------------------------ARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
++D AR +FDE ++ ++ WN M+ YAK GD+
Sbjct: 138 ALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVK--DLVSWNVMITAYAKRGDM 195
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
AR LF+ + E++V+SW +I+GY + A+ LF +MQ KPD + ML+ LSAC
Sbjct: 196 ALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSAC 255
Query: 221 AQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A G +++G+ +H+ + + + N V L NALIDMYAK G + A +VF +M++K V T
Sbjct: 256 ADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVST 315
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H G+V+ GR +FN+M+
Sbjct: 316 WNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQ 375
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+Y +EP I+ YGCM+D+LGRAG L+EA + + M E N+ IW +LL+A ++G++EL
Sbjct: 376 HKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELA 435
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+ A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV K
Sbjct: 436 KHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 296/489 (60%), Gaps = 13/489 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
MIV GL ++ L + + C+ L YA IF S P+ +LY + A + PL+
Sbjct: 47 MIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLH 105
Query: 60 AVILYN----KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A ++ + S RP+++ +P VLK+ LS+ +H +G V V
Sbjct: 106 ASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQT 165
Query: 116 ALIQMYAS-CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AL+ YAS I AR++FDE+S R NV W M++GYA+ GD++NA ALFE M E++
Sbjct: 166 ALLHSYASSVSHITLARQLFDEMSER--NVVSWTAMLSGYARSGDISNAVALFEDMPERD 223
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIH 233
V SW ++A Q EA++LFRRM E +++P+E+ ++ LSACAQ G ++L + IH
Sbjct: 224 VPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIH 283
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ + L++ V ++N+L+D+Y K G + +A VF+ KS+ W +MI ALHG
Sbjct: 284 AFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSE 343
Query: 294 EALDMFSRMERARV---KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EA+ +F M + + KP+ ITFI +L+AC H GLV GR YF++M +R+GIEP+IE Y
Sbjct: 344 EAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHY 403
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GC+IDLLGRAG EA +++ M +A+ AIWGSLL A I+G ++L E A+++L+ L P
Sbjct: 404 GCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNP 463
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+N G A+++N+Y +G W E+ + RK+++ K PG S IE+ VH+F + D SHP
Sbjct: 464 NNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHP 523
Query: 471 DFDRLYQIL 479
+ + +Y IL
Sbjct: 524 ETEEIYMIL 532
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 189/531 (35%), Positives = 295/531 (55%), Gaps = 62/531 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I L + SR +DS S + +YA +F +P+ ++ NT +K ++ P
Sbjct: 34 LITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPER 93
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ Y +++ L DNY++PFVLKA + + G + + V G DV VV LI
Sbjct: 94 ALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLIS 153
Query: 120 MYASC------KCIYD-------------------------ARKVFDELSLR---VWNVA 145
MY C + ++D A+ +FDE+ R W++
Sbjct: 154 MYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIM 213
Query: 146 V---------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+ WN+M+ GYAKVG++ AR +F+ M +KNVISW
Sbjct: 214 IDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISW 273
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+ +I GYA EA+ LFR+M + +KPD ++++ A+SAC+QLGA++ G WIH Y+++
Sbjct: 274 SIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKR 333
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ + + AL+DMY K G +A +F +M ++V++W MI GL ++G G+EAL+
Sbjct: 334 NRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALEC 393
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +ME R+ +++ F+ +L AC H LV G FN MK Y +EPK+E YGC++DLLG
Sbjct: 394 FXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLG 453
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L + + +++ MP + NAA+WGSLL A I+ +V L E ++ L +L+ +SG Y +
Sbjct: 454 RAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVL 513
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
+SNIYA +G W +IRK+M++ +KK G S IEV V EFV+G+ SH
Sbjct: 514 MSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSH 564
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/435 (40%), Positives = 273/435 (62%), Gaps = 6/435 (1%)
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
Y ++ L DN++ PFVLK+ LS + +GR +H Q + GL+ D +V A+LI MY
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVK 154
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C I DARK+FD++ +R ++A WN ++AGY K G++ A LFE M +N++SWT +I+
Sbjct: 155 CGVIGDARKLFDKMIVR--DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMIS 212
Query: 184 GYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
GY Q +A+ LF M + +KP+ + +++ L ACAQ A+E G IH++ GL
Sbjct: 213 GYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGL 272
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMF 299
+ + AL MYAK + +A F+ + K++I W TMI A HG G EA+ +F
Sbjct: 273 HLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIF 332
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M RA V+P+ +TF+ +LS C H GL++ G +FN M + + +EP++E Y C++DLLGR
Sbjct: 333 ENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGR 392
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L EA++L+ +MP +A ++WG+LLAA + ++E+ E A + L LEP NSGNY +L
Sbjct: 393 AGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLL 452
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SN+YA G W E K+R +++ G+KK PGCS+IE++ + H F+ D SHP +Y+ L
Sbjct: 453 SNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFL 512
Query: 480 CKINGQMKFAEHLQN 494
+ ++K A ++ +
Sbjct: 513 EALPEKIKMAGYIPD 527
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/481 (36%), Positives = 281/481 (58%), Gaps = 37/481 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G Q+ ++ + SCS DYA IF + P+VYLY I + N L A
Sbjct: 62 LIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEA 121
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY+++ ++ PDNY +LKA + GRE+H + + G S+ V ++++
Sbjct: 122 IQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMEL 181
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE----KNVI 176
Y C G+L +AR +FE M E K+ +
Sbjct: 182 YGKC---------------------------------GELGDARRVFEEMPEDVVAKDTV 208
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
WT +I G+ + ++ N A+ FR MQ ENV+P+E ++ LSAC+QLGA+E+G W+H+Y+
Sbjct: 209 CWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYM 268
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
++ + + + NALI+MY++ G I +A VF+ MK++ VIT+ TMI+GL+++G R+A+
Sbjct: 269 RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAI 328
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++F M R++P +TF+ +L+AC H GLV+ G F+ M Y +EP+IE YGCM+DL
Sbjct: 329 ELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDL 388
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR G L+EA L+R M + + G+LL+A ++ ++ELGE + L +SG Y
Sbjct: 389 LGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTY 448
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LS++YA G+W E+ ++R M++ G++K PGCS IEV+ +HEF+ GD HP +R+Y
Sbjct: 449 VLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIY 508
Query: 477 Q 477
+
Sbjct: 509 E 509
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 47/313 (15%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGRE---------IHCQTVGTGLDSDVHVVAALIQMYASC 124
P++ S P LK++ + I L + IH Q + G D +V L++ + C
Sbjct: 25 PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 84
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I + A +F+ NV +T LI G
Sbjct: 85 HAI---------------------------------DYASRIFQYTHNPNVYLYTALIDG 111
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+ EAI L+ RM E++ PD M + L AC A+ G +H+ + G ++
Sbjct: 112 FVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSN 171
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKN----KSVITWTTMIAGLALHGLGREALDMFS 300
+ ++++Y K G++G A +VFE M K + WT MI G + AL+ F
Sbjct: 172 RLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFR 231
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M+ V+PNE T + +LSAC +G +E+GR + M+ ++ IE + +I++ R
Sbjct: 232 GMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR-KFEIELNLFVGNALINMYSRC 290
Query: 361 GYLQEAEKLLRRM 373
G + EA+ + M
Sbjct: 291 GSIDEAQTVFDEM 303
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 280/465 (60%), Gaps = 2/465 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G +F +P + L+ I+A P A+ L+ ++ L PD + V+
Sbjct: 140 GLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVV 199
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L + + + +HC +G++ D V + LI Y C + A + F E ++ N
Sbjct: 200 SACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK--N 257
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ VWNTM+ + +L + LF+ M +++V+SW ++I G+A++ Q EA+T F M+
Sbjct: 258 IVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEF 317
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V P+ + +L+ LSACA GA++ G WIH Y+++ +N L+++LIDMY+K G I K
Sbjct: 318 SGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDK 377
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A+Q+FE + + TWT+++ GLA+HG G +AL FS+M+ A+V+P+++T + +LSAC H
Sbjct: 378 AVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAH 437
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL++ G YF M+ +G+ PK+E YGCM+DLLGR G L+EA L+ MP EAN IWG
Sbjct: 438 AGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWG 497
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+ L+A ++ +VELGE A + L+ L+P + +LSN+YA +W+ S +RK ++ G
Sbjct: 498 AFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKG 557
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+KK PGCS IEV+ VH F+ GD SHP + + ++ KI M+
Sbjct: 558 LKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKLMRL 602
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 180/410 (43%), Gaps = 85/410 (20%)
Query: 40 DVYLYNTTIK-----ALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIEL 94
+V+++NT I+ L D PL + Y + + LRP+ ++F ++LKA+V ++
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPL---LYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKE 109
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY 154
G E+H V TG V AL+ Y +C + R+VFDE
Sbjct: 110 GEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDE------------------ 151
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
M + ++ WT +I Y + P +A+ LFR M+ + PD +A+
Sbjct: 152 ---------------MRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAIS 196
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL--------- 265
+SAC LG + + + +H +IE+ G+ +++ LI Y + G + A
Sbjct: 197 TVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK 256
Query: 266 ----------------------QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
Q+F++M ++ V++W +MI G A G +EAL F ME
Sbjct: 257 NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEME 316
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ V PN +T ++ LSAC G ++ G + + + + +ID+ + G +
Sbjct: 317 FSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDI 375
Query: 364 QEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+A E+ RR F W S++ ++G GE AL + K++
Sbjct: 376 DKAVQIFEESTRRDLF-----TWTSIVCGLAMHGR---GEKALHYFSKMK 417
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 127/318 (39%), Gaps = 66/318 (20%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN-------- 56
G++ + + S I + G DYAY F ++ ++NT I + +N
Sbjct: 222 GIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLF 281
Query: 57 ---PLNAVILYN--------------------KIQASALRPDNYSFPFVLKAVVKLSTIE 93
P V+ +N +++ S + P+ + L A ++
Sbjct: 282 QSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALD 341
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
G IH ++ D + ++LI MY+ C I A ++F+E
Sbjct: 342 TGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE----------------- 384
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
T +++ +WT+++ G A + +A+ F +M+ V+PD++ M
Sbjct: 385 ----------------STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTM 428
Query: 214 LAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ LSACA G ++ G W +E+ +GL V ++D+ + G + +A + M
Sbjct: 429 VGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMP 488
Query: 273 NKS-VITWTTMIAGLALH 289
++ I W ++ +H
Sbjct: 489 MEANEIIWGAFLSACRVH 506
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 279/468 (59%), Gaps = 39/468 (8%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI----QASA 71
F + + G +AY +F +PD ++YNT I+ T P +AV LY ++
Sbjct: 18 FASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGG 77
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC------K 125
+RPD +FPFVL+A + + G ++H V G +SD V ALI M+ASC
Sbjct: 78 VRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAA 137
Query: 126 CIYD-------------------------ARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
++D AR +FDE ++ ++ WN M+ YAK GD+
Sbjct: 138 ALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVK--DLVSWNVMITAYAKRGDM 195
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
AR LF+ + E++V+SW +I+GY + A+ LF +MQ KPD + ML+ LSAC
Sbjct: 196 ALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSAC 255
Query: 221 AQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A G +++G+ +H+ + + + N V L NALIDMYAK G + A +VF +M++K V T
Sbjct: 256 ADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVST 315
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H G+V+ GR +FN+M+
Sbjct: 316 WNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQ 375
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+Y +EP I+ YGCM+D+LGRAG L+EA + + M E N+ IW +LL+A ++G++EL
Sbjct: 376 HKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELA 435
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+ A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV K
Sbjct: 436 KHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/461 (41%), Positives = 267/461 (57%), Gaps = 39/461 (8%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA-SALRPDNYSFP 80
S G+ + A +F DV +N I +T N A+ L+ ++ + +RPD +
Sbjct: 167 SRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMV 226
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
V+ A + +IELGR +H G S++ +V ALI +Y+
Sbjct: 227 TVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYS------------------ 268
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
K G++ A LF+ + K+VISW TLI GY M+ EA+ LF+
Sbjct: 269 ---------------KFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQE 313
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNT-IVPLNNALIDMYAK 257
M P+++ ML+ L ACA LGA+++G WIH YI + G+ T + L +LIDMYAK
Sbjct: 314 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAK 373
Query: 258 SGKIGKALQVFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
G I A QVF++ M N+S+ TW MI+G A+HG A D+FSRM ++P++ITF+
Sbjct: 374 CGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVG 433
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+LSAC H G+++LGR F M Y I PK+E YGCMIDLLG +G +EAE+++ MP E
Sbjct: 434 LLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME 493
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
+ IW SLL A I+G++ELGE + LIK+EP NSG+Y +LSNIYA GRWNE KIR
Sbjct: 494 PDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIR 553
Query: 437 KVMRDMGV-KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
++ D G+ KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 554 ALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 594
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 231/399 (57%), Gaps = 8/399 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ ++ C D YA S+F +P++ ++NT + + +P
Sbjct: 11 MIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDP 70
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L PD+Y+FPF+LK+ K + G++IH + G D D++V +L
Sbjct: 71 VSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSL 130
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MYA + DARKVFD S R +V + ++AGY G + +A+ LF+ + K+V+S
Sbjct: 131 ISMYAQNGRLEDARKVFDISSHR--DVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVS 188
Query: 178 WTTLIAGYAQMDQPNEAITLFRR-MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
W +I+GY + EA+ LF+ M + NV+PDE M+ +SACAQ ++ELG +H++I
Sbjct: 189 WNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWI 248
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+G + + + NALID+Y+K G++ A ++F+ + NK VI+W T+I G L +EAL
Sbjct: 249 NDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEAL 308
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY-GCMI 354
+F M R+ PN++T ++IL AC H+G +++GR + I K G+ + +I
Sbjct: 309 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLI 368
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
D+ + G + A+++ + + W ++++ ++G
Sbjct: 369 DMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHG 407
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 72/329 (21%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD----ARKVFDELSLRVWNVAVWNTMV 151
R IH Q + TGL + + ++ L++ + +D A VFD +++ N+ +WNTM
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLE-FCVVSPHFDGFPYAISVFD--TIQEPNLLIWNTMF 61
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G+A D P A+ L+ M + PD
Sbjct: 62 RGHALSSD-------------------------------PVSALKLYLVMISLGLLPDSY 90
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV---- 267
L +CA+ + G+ IH ++ + G + + ++ +LI MYA++G++ A +V
Sbjct: 91 TFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDIS 150
Query: 268 ---------------------------FENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
F+ + K V++W MI+G G +EAL++F
Sbjct: 151 SHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFK 210
Query: 301 R-MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M V+P+E T + ++SAC +ELGR + + +G ++ +IDL +
Sbjct: 211 EMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWIND-HGFASNLKIVNALIDLYSK 269
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G ++ A +L + + + W +L+
Sbjct: 270 FGEVETACELFDGL-WNKDVISWNTLIGG 297
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 169/363 (46%), Positives = 245/363 (67%), Gaps = 3/363 (0%)
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V V NT+V YA G +A LFELM E+N+++W ++I GYA +PNEA+TLFR M +
Sbjct: 30 VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL 89
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V+PD M++ LSACA+LGA+ LG H Y+ + GL+ + NAL+D+YAK G I +
Sbjct: 90 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQ 149
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +VF+ M+ KSV++WT++I GLA++G G+EAL++F +ER + P+EITF+ +L AC H
Sbjct: 150 AHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSH 209
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G+V+ G YF MK YGI PKIE YGCM+DLLGRAG +++A + ++ MP + NA +W
Sbjct: 210 CGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWR 269
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A I+G + LGE A L++LEP +SG+Y +LSN+YA RW++ K+R+ M G
Sbjct: 270 TLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREG 329
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVL 500
VKK PG S +E+ R+HEFV GD SHP + +Y L +I +K + H+ N + +
Sbjct: 330 VKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIE 389
Query: 501 ESD 503
E +
Sbjct: 390 EEE 392
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 138/301 (45%), Gaps = 37/301 (12%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
++ G ++ A+ +F ++ ++ +N+ I P A+ L+ ++ + PD ++
Sbjct: 41 AACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMV 100
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A +L + LGR H V GLD ++H AL+ +YA
Sbjct: 101 SLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYA------------------ 142
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
K G + A +F+ M EK+V+SWT+LI G A EA+ LF+
Sbjct: 143 ---------------KCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 187
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
++ + + P EI + L AC+ G V+ G ++ E+YG+ + ++D+ ++G
Sbjct: 188 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 247
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
+ +A + +NM + + W T++ +H G AL +R + +++P +L
Sbjct: 248 LVKQAHEFIQNMPMQPNAVVWRTLLGACTIH--GHLALGEVARAQLLQLEPKHSGDYVLL 305
Query: 319 S 319
S
Sbjct: 306 S 306
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A A+L V GE +H+ + G ++V + N L+ MYA G A ++FE M ++++T
Sbjct: 4 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 63
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W ++I G AL+G EAL +F M V+P+ T +++LSAC +G + LGRR M
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM- 122
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+ G++ + ++DL + G +++A K+ M E + W SL+ + G G
Sbjct: 123 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME-EKSVVSWTSLIVGLAVNG---FG 178
Query: 399 ECALQHLIKLE 409
+ AL+ +LE
Sbjct: 179 KEALELFKELE 189
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 203/492 (41%), Positives = 297/492 (60%), Gaps = 29/492 (5%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS---DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI L + +SR I CS G S DYA S+F+ P+ +++ IK T NP
Sbjct: 29 MIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNP 88
Query: 58 LNAVILYNKIQASALRPDN---YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
+ ++ILY ++ S L + +S P VLKA KL + GR++H Q + T L D V
Sbjct: 89 VESLILYARM-LSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVG 147
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
++++MY I AR+VFD + R +V WN+M+AGY K G++ A LF+ M E++
Sbjct: 148 NSMVRMYIDFGEIELARRVFDRMPNR--DVVSWNSMIAGYLKAGEIELASELFDEMPERD 205
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
++S +I GY + E ++L ++PD A+++ LSA A LG VE G+W+H
Sbjct: 206 LVSCNAMIDGYGK-----EMLSL-------GLRPDGPAIVSVLSAIADLGFVEEGKWLHA 253
Query: 235 YIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVI-TWTTMIAGLALHGLG 292
Y+ + + +ALIDMY+K G I A VF ++ ++ I W +MI+GLA+HGL
Sbjct: 254 YVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLA 313
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
REALD+F MER ++PNEITF+ +LS C H GLVE G+ YF M +Y I P+I+ YGC
Sbjct: 314 REALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGC 373
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
MIDL GRAG L++A +++ MPFEA+ W ++L+AS +G +E+G+ A I+L P +
Sbjct: 374 MIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDD 433
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
S +Y +LSNIYA GRW++ KIR +MR GVKK+ GCS + V+ +VHEF+ G +
Sbjct: 434 SSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLG----KEL 489
Query: 473 DRLY--QILCKI 482
D Y Q+L KI
Sbjct: 490 DSSYSGQVLAKI 501
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/475 (39%), Positives = 269/475 (56%), Gaps = 43/475 (9%)
Query: 15 RFIDSCSSL-------GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
R + SC++L G A +F ++ DV +N I + A+ L+ ++
Sbjct: 147 RDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEM 206
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKC 126
+ +RPD + VL A + +IELGREIH G S + +V A I +Y+ C
Sbjct: 207 MRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKC-- 264
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
GD+ A LFE ++ K+V+SW TLI GY
Sbjct: 265 -------------------------------GDVEIASGLFEGLSCKDVVSWNTLIGGYT 293
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTI 244
M+ EA+ LF+ M P+++ ML+ L ACA LGA+++G WIH YI++ G+
Sbjct: 294 HMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNG 353
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
L +LIDMYAK G I A QVF +M +KS+ +W MI G A+HG A D+FSRM +
Sbjct: 354 SALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRK 413
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++P++IT + +LSAC H GL++LGR F + Y I PK+E YGCMIDLLG AG +
Sbjct: 414 NGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFK 473
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE+++ MP E + IW SLL A ++G++EL E Q L+++EP NSG+Y +LSNIYA
Sbjct: 474 EAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYA 533
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
GRW + +IR+V+ G+KK+PGCS IE+ VHEF+ GD HP +Y++L
Sbjct: 534 TAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRML 588
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 223/392 (56%), Gaps = 11/392 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
M+ GL N+ LS+ ++ C D YA S+F +P++ ++NT ++ L + +
Sbjct: 5 MVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDL 64
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++ + +Y ++ + P+ Y+FPF+LK+ K T E GR+IH Q + G + D + +L
Sbjct: 65 VSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSL 124
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MYA + DARKVFD S R +V ++ GYA GD+ +AR +F+ +TE++V+S
Sbjct: 125 ISMYARNGRLEDARKVFDXSSQR--DVVSCTALITGYASRGDVRSARKVFDXITERDVVS 182
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI- 236
W +I GY + EA+ LF+ M NV+PDE +++ LSACAQ G++ELG IH +
Sbjct: 183 WNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVD 242
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ +G + + + NA I +Y+K G + A +FE + K V++W T+I G L +EAL
Sbjct: 243 DHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEAL 302
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID 355
+F M R+ PN++T +++L AC H+G +++GR + I K G+ +ID
Sbjct: 303 LLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLID 362
Query: 356 LLGRAGYLQEAEKLLRRMPFEA----NAAIWG 383
+ + G ++ A ++ M ++ NA I+G
Sbjct: 363 MYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFG 394
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 276/467 (59%), Gaps = 33/467 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F S+PD+ ++N+ + + NPL L+ +I + PDNY+FP +LKA
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+E GR++HC ++ GLD +V+V LI MY C+
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE---------------------- 178
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
D+++AR +F+ + E V+ + +I GYA+ ++PNEA++LFR MQ + +K
Sbjct: 179 -----------DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+EI +L+ LS+CA LG+++LG+WIH Y +++ V +N ALIDM+AK G + A+ +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE M+ K W+ MI A HG +++ MF RM V+P+EITF+ +L+AC H G V
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E GR+YF+ M S++GI P I+ YG M+DLL RAG L++A + + ++P +W LLA
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A + + +++L E + + +L+ + G+Y ILSN+YA +W +RKVM+D K+
Sbjct: 408 ACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKV 467
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
PGCS IEV+ VHEF +GD +L++ L ++ ++K + ++ +
Sbjct: 468 PGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 130/288 (45%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD N ++ I+ + D A +F +P V YN I + + P A+ L+
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L+P+ + VL + L +++LG+ IH V V ALI M+A C
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA +F++ +R + W+ M+ YA G
Sbjct: 279 GSLDDAVSIFEK--MRYKDTQAWSAMIVAYANHG-------------------------- 310
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+ +++ +F RM+ ENV+PDEI L L+AC+ G VE G ++ + ++G+
Sbjct: 311 -----KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ +++D+ +++G + A + + + + + + W ++A + H
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 285/474 (60%), Gaps = 20/474 (4%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L+ +H+ + I +S G + A +F D+ +N I + A+ +Y
Sbjct: 112 LELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYK 171
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ ++PD+ + ++ + L + G+E + GL + + AL+ M++ C
Sbjct: 172 VMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCG 231
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
I++AR++FD L R T+V+ LF+ M EK+V+ W +I G
Sbjct: 232 DIHEARRIFDNLEKR--------TIVS------------KLFDDMEEKDVVMWNAMIGGS 271
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
Q + +A+ LF+ MQ N PDEI M+ LSAC+QLGA+++G WIH YIE++ L+ V
Sbjct: 272 VQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNV 331
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
L +L+DMYAK G I +AL VF ++ ++ +T+T +I GLALHG A+ F+ M A
Sbjct: 332 ALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 391
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ P+EITFI +LSACCH G+++ GR YF+ MKSR+ + P+++ Y M+DLLGRAG L+E
Sbjct: 392 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 451
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A+KL+ MP EA+AA+WG+LL ++G+V+LGE A + L++L+P +SG Y +L +Y
Sbjct: 452 ADKLMESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGE 511
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
W ++ + R++M + GV+K+PGCS IEV+ V EF+ D S P+ +++Y L
Sbjct: 512 ANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCL 565
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 198/415 (47%), Gaps = 59/415 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++ GL + SR I C S + +Y I P+ + +N TI+ +++NP
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPK 60
Query: 59 NAVILYNKIQASAL---RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
+AV+ Y ++ RPD++++P + K L LG I L+ HV
Sbjct: 61 DAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHN 120
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A I M+ASC + +ARKVFDE +R ++ WN ++ GY K+G
Sbjct: 121 ASIHMFASCGEMENARKVFDESPVR--DLVSWNCLINGYKKIG----------------- 161
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+ +AI +++ M+ E VKPD++ M+ +S+CA LG + G+ + Y
Sbjct: 162 --------------EGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEY 207
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN-------------MKNKSVITWTTM 282
++ GL +PL NAL+DM++K G I +A ++F+N M+ K V+ W M
Sbjct: 208 VKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAM 267
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKS 339
I G ++AL +F M+ + P+EIT I LSAC +G +++G RY
Sbjct: 268 IGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIE---- 323
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
++ + + ++D+ + G + EA + + N+ + +++ ++GD
Sbjct: 324 KHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTR-NSLTYTAIIGGLALHGD 377
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 301/543 (55%), Gaps = 64/543 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I R L Q+ H+ + I + S ++ A +F +P+V+L N+ I+A P A
Sbjct: 42 IIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQA 101
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+++++Q L DN+++PF+LKA LS + + + +H GL SD++V ALI
Sbjct: 102 FFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 121 YASCKCI---------------------------------YDARKVFDELSLR---VWNV 144
Y+ C + DARK+FDE+ R WN
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNT 221
Query: 145 AV--------------------------WNTMVAGYAKVGDLNNARALFELMT--EKNVI 176
+ W+TMV GY+K GD+ AR +F+ M KNV+
Sbjct: 222 MLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVV 281
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+WT +IAGYA+ EA L +M ++ D A ++ L+ACA+ G + LG H+ I
Sbjct: 282 TWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSII 341
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
++ LN+ + NAL+DMYAK G + KA VF +M K +++W TM+ GL +HG G+EA+
Sbjct: 342 KKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAI 401
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FSRM + + P+++TFIA+L +C H GL++ G YF M+ Y + PK+E YGC++DL
Sbjct: 402 ELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDL 461
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR G L+EA K+++ MP E N IWG+LL A ++ +V++ + L +L+KL+P + GNY
Sbjct: 462 LGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNY 521
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSNIYA W IR M+ MGV+K G S +E+ +HEF D SHP D++Y
Sbjct: 522 TLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Query: 477 QIL 479
Q+L
Sbjct: 582 QML 584
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 45/309 (14%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L+ + K + + +++H Q + L D+H+ LI + C+ A +VF+++
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQ---- 78
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
E NV +LI +A QP +A +F MQ
Sbjct: 79 -----------------------------EPNVHLCNSLIRAHALNSQPYQAFFVFSEMQ 109
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ D L AC+ L + + + +HN+IE+ GL++ + + NALID Y++ G +G
Sbjct: 110 RFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG 169
Query: 263 --KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
A+++FE M + ++W +M+ GL G R+A +F M + + I++ +L
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDL----ISWNTMLDG 225
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NA 379
+ F M R + + M+ +AG ++ A + +MPF A N
Sbjct: 226 YARCREMSRAFELFEKMPERNTV-----SWSTMVMGYSKAGDMEMARVMFDKMPFPAKNV 280
Query: 380 AIWGSLLAA 388
W ++A
Sbjct: 281 VTWTIIIAG 289
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
L L CA L V+ +H I + L+ + + LI + + AL+VF ++
Sbjct: 23 LQDLPKCANLNQVKQ---LHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQE 79
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+V ++I AL+ +A +FS M+R + + T+ +L AC + + + +
Sbjct: 80 PNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMM 139
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYL--QEAEKLLRRMPFEANAAIWGSLLAASNI 391
N ++ + G+ I +ID R G L ++A KL +M E + W S+L
Sbjct: 140 HNHIE-KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLG---- 193
Query: 392 YGDVELGE 399
G V+ GE
Sbjct: 194 -GLVKAGE 200
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 190/513 (37%), Positives = 275/513 (53%), Gaps = 62/513 (12%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F PDV LYNT I+A + PL A ++ ++Q S + DN+++PF+LKA
Sbjct: 68 AVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSG 127
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC---------------------- 126
+ + IH Q G D+ V +LI Y C
Sbjct: 128 KVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWN 187
Query: 127 -----------IYDARKVFDELSLR---VWN--------------------------VAV 146
+ +AR++FDE+ R WN V
Sbjct: 188 SMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVS 247
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W+TMV GY+K GD++ AR LF+ M KN++ WT +I+GYA+ +AI L+ +M+ +
Sbjct: 248 WSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGL 307
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
K D+ +++ LSACA G + LG+ +H IE+ P++NALIDMYAK G + AL
Sbjct: 308 KFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALS 367
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F M K V++W +I GLA+HG G +AL +FSRM+ P+++TF+ +L AC H G
Sbjct: 368 IFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGF 427
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ G YF+ M+ YG+ P++E YGCM+DLLGR G L+EA +L+ MP E NA IWG+LL
Sbjct: 428 VDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLL 487
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A ++ L E L+K E +SGN ++LSNIYA G W+ IR M+ ++K
Sbjct: 488 GACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQK 547
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
G S IEV VHEF D SHP DR+Y+ +
Sbjct: 548 PSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 580
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 115/288 (39%), Gaps = 38/288 (13%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G D A +F ++ + I + +A+ LYN+++ + L+ D+ +
Sbjct: 256 SKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVI 315
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A + LG+ +H T V ALI MYA C + +A +F + +
Sbjct: 316 SILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRK 375
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V WN ++ G A G +A+ LF R
Sbjct: 376 --DVVSWNAIIQGLAMHG-------------------------------HGEKALQLFSR 402
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M+ E PD++ + L AC G V+ G + H YG+ V ++D+ + G
Sbjct: 403 MKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGG 462
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALH---GLGREALDMFSRME 303
++ +A ++ +M + I W T++ +H GL E D + E
Sbjct: 463 RLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSE 510
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
V ++A ++ + A +F + + +V+ + TLI + + +P A ++F MQ
Sbjct: 51 VGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSG 110
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG--KIGK 263
V D L AC+ V + E IH +E+ G + + N+LID Y K G +
Sbjct: 111 VCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAA 170
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACC 322
A +VFE M + ++W +MI GL G EA +F M ER V N IL
Sbjct: 171 ARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWN-----TILDGYV 225
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
G + F M +R + + M+ +AG + A L +MP + N W
Sbjct: 226 KAGEMNAAFELFEKMPAR-----NVVSWSTMVLGYSKAGDMDMARILFDKMPVK-NLVPW 279
Query: 383 GSLLAA 388
+++
Sbjct: 280 TIMISG 285
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 183/467 (39%), Positives = 277/467 (59%), Gaps = 36/467 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV+ L N + FI +C SLG D A +FTH SKP V++ N+ I+A P
Sbjct: 34 LIVQNLHSNTTIAHHFITACQSLGLLDSALLLFTHHSKPHVFICNSLIRAFSHNHTPHTP 93
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+Y + ++++ P+N++FPF+LK++ + G+ IH V G D++V +L+ +
Sbjct: 94 FSIYTHMHSNSILPNNFTFPFLLKSLADFKGLSEGQCIHTHVVKLGQFDDIYVQNSLLNV 153
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YASC GD+ +F+ M ++V+SWT
Sbjct: 154 YASC---------------------------------GDMGLCMRVFDEMPHRDVVSWTV 180
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI GY ++ ++A+ F +MQ V P+ + M+ ALSACA GA+E+G WIH +I + G
Sbjct: 181 LITGYRSAERYDDALIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWIHEFIRRSG 240
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
V L +LIDMY K G+I + L VF +MK K+V TW ++I GLAL G EA+ F
Sbjct: 241 WEFDVILGTSLIDMYGKCGRIEEGLVVFRSMKEKNVFTWNSLIKGLALARSGAEAVWWFY 300
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYF-NIMKSRYGIEPKIEQYGCMIDLLGR 359
RME+ +K +E+T IA+L AC H G+V++GR+ F ++M +Y P ++ Y C+IDLL R
Sbjct: 301 RMEQEGIKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLAR 360
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG LQEA +++ RMPFE N +WG+ LA +GD+EL E A + L++LEP N Y +L
Sbjct: 361 AGILQEAMEVMTRMPFEPNKVMWGAFLAGCRAHGDLELSEFAARKLVELEPGNGAYYVLL 420
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV--SKRVHEFVA 464
SNIYA +GRW++ K+R++M++ G+ K GCS IE+ +RV+E +A
Sbjct: 421 SNIYAEMGRWSDVEKVRRLMKEGGLTKDLGCSSIELEPQERVYELLA 467
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/463 (39%), Positives = 276/463 (59%), Gaps = 4/463 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPDNYSFPFVLKAV 86
+A ++F DV + T + + A ++ + + A L+P+ + V+ A+
Sbjct: 194 HARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAM 253
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
++ + GR ++ G+ V++ ALI M+ C AR+VFD ++++ +V
Sbjct: 254 GQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVK--DVYS 311
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W TMV YAK GDL +A LF+ M +N +SW+ +IA Y+Q +QP EA+ LF+ M E V
Sbjct: 312 WTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGV 371
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+P +++ LSACAQLG ++LG WI+ NY+ V L NA ID+YAK G A
Sbjct: 372 EPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAAS 431
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
++F M ++V++W +MI A+HG E L +F +++ + P+EITF+ +LSAC H G
Sbjct: 432 KLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSG 491
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
LV GRRYF MK YGIEPK E Y CMIDLLG+ G L+EA ++ + MP E + A WG+L
Sbjct: 492 LVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGAL 551
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L A +YG+VE+GE A L++L P +SG Y ++S IYA +W++ +R +MR+ GVK
Sbjct: 552 LNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVK 611
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
K PGCS IEV + HEF+ D SH + +Y L I +K+
Sbjct: 612 KNPGCSSIEVDGKFHEFLVADVSHVHSEDIYAALKNIYFHLKW 654
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 190/434 (43%), Gaps = 72/434 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+ V GL + SR + C S+ D+A +I S P+ Y+ T ++A + P
Sbjct: 60 LTVSGLAAHRFPASRLLAFCALSTPPRVDHAAAILARASAPNAYMLATMMRAFLRARLPS 119
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A L+ ++ +L D + F +KA E H + G G VH VA
Sbjct: 120 RASALFRRVIRESLPADARTLVFAIKAAAS------EHEHHSPSGGEG----VHCVALKW 169
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
A +V V N +V YA L +AR LF+ M +++V+SW
Sbjct: 170 GHVAQ-------------------SVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSW 210
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
TTL+ GYA+ +EA +F RM V ++P+E+ ++A +SA Q+G + G ++ Y+
Sbjct: 211 TTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVA 270
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA----LHGLGR 293
G+ V L NALIDM+ K G A +VF++M K V +WTTM+ A L R
Sbjct: 271 DGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAAR 330
Query: 294 ---------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGL 326
EA+ +F M V+P +++LSAC +G
Sbjct: 331 LFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGC 390
Query: 327 VELGRRYFNIMKSRYGIEPK----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
++LGR ++ Y I K + ID+ + G A KL M E N W
Sbjct: 391 LDLGRWIYD----NYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMA-ERNVVSW 445
Query: 383 GSLLAASNIYGDVE 396
S++ A ++G E
Sbjct: 446 NSMIMAHAVHGQSE 459
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 194/502 (38%), Positives = 294/502 (58%), Gaps = 12/502 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+D+ LL R + + + YA +F H +LYN I+A P +++LY
Sbjct: 8 GVDETKDLLQRLLLIPNLV----YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY 63
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + LRP +++F F+ A S+ R +H Q +G +SD LI YA
Sbjct: 64 NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKL 123
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR+VFDE+S R +V VWN M+ GY + GD+ A LF+ M KNV SWTT+I+G
Sbjct: 124 GALCCARRVFDEMSKR--DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISG 181
Query: 185 YAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++Q +EA+ +F M+ + +VKP+ I +++ L ACA LG +E+G + Y + G
Sbjct: 182 FSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD 241
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + NA I+MY+K G I A ++FE + N +++ +W +MI LA HG EAL +F++M
Sbjct: 242 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 301
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R KP+ +TF+ +L AC H G+V G+ F M+ + I PK+E YGCMIDLLGR G
Sbjct: 302 LREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGK 361
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA L++ MP + +A +WG+LL A + +G+VE+ E A + L KLEP N GN I+SNI
Sbjct: 362 LQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNI 421
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSY-IEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
YA +W+ ++RK+M+ + K G SY +EV VH+F D SHP +YQ+L +
Sbjct: 422 YAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEE 481
Query: 482 INGQMKFAEHLQNEFSGVLESD 503
I +MK ++ F +L+ +
Sbjct: 482 IFRRMKLE---KSRFDSLLQPE 500
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 185/467 (39%), Positives = 267/467 (57%), Gaps = 39/467 (8%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I +S G+ + A +F DV +N I +T N A+ L+ ++ + ++PD
Sbjct: 147 LITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPD 206
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ V+ A + +IELGR++H G S++ +V ALI +Y+
Sbjct: 207 ESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYS------------- 253
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
K G++ A L E ++ K+VISW TLI GY M+ EA+
Sbjct: 254 --------------------KCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEAL 293
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV----PLNNAL 251
LF+ M P+++ ML+ L ACA LGA+++G WIH YI++ +V L +L
Sbjct: 294 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSL 353
Query: 252 IDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
IDMYAK G I A QV ++ N+S+ TW MI G A+HG A D+FSRM + ++P+
Sbjct: 354 IDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 413
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+ITF+ +LSAC H G+++LGR F M+ Y I PK+E YGCMIDLLG +G +EAE+++
Sbjct: 414 DITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMI 473
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
MP E + IW SLL A I+G++ELGE + LIK+EP N G+Y +LSNIYA G+WN
Sbjct: 474 NTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWN 533
Query: 431 ESGKIRKVMRDMGV-KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
E KIR ++ D G+ KK+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 534 EVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 580
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 213/369 (57%), Gaps = 5/369 (1%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA S+F +P+ ++N + + +P++A+ LY + + L P+ ++FPF+LK+
Sbjct: 27 YAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCA 86
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
K T + G++IH + G D D++V +LI MYA + DA+KVFD S R +V +
Sbjct: 87 KSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR--DVVSY 144
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ GYA G + +A+ +F+ + K+V+SW +I+GYA+ +A+ LF+ M NVK
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PDE M +SACAQ G++ELG +H++I +G + + + NALID+Y+K G++ A ++
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
E + NK VI+W T+I G L +EAL +F M R+ PN++T ++IL AC H+G +
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324
Query: 328 ELGRR-YFNIMKSRYG--IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
++GR + I K G + +ID+ + G + A ++ F + + W +
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384
Query: 385 LLAASNIYG 393
++ ++G
Sbjct: 385 MIFGFAMHG 393
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 194/502 (38%), Positives = 294/502 (58%), Gaps = 12/502 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+D+ LL R + + + YA +F H +LYN I+A P +++LY
Sbjct: 15 GVDETKDLLQRLLLIPNLV----YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY 70
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + LRP +++F F+ A S+ R +H Q +G +SD LI YA
Sbjct: 71 NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKL 130
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR+VFDE+S R +V VWN M+ GY + GD+ A LF+ M KNV SWTT+I+G
Sbjct: 131 GALCCARRVFDEMSKR--DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISG 188
Query: 185 YAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++Q +EA+ +F M+ + +VKP+ I +++ L ACA LG +E+G + Y + G
Sbjct: 189 FSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD 248
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + NA I+MY+K G I A ++FE + N +++ +W +MI LA HG EAL +F++M
Sbjct: 249 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 308
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R KP+ +TF+ +L AC H G+V G+ F M+ + I PK+E YGCMIDLLGR G
Sbjct: 309 LREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGK 368
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA L++ MP + +A +WG+LL A + +G+VE+ E A + L KLEP N GN I+SNI
Sbjct: 369 LQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNI 428
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSY-IEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
YA +W+ ++RK+M+ + K G SY +EV VH+F D SHP +YQ+L +
Sbjct: 429 YAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEE 488
Query: 482 INGQMKFAEHLQNEFSGVLESD 503
I +MK ++ F +L+ +
Sbjct: 489 IFRRMKLE---KSRFDSLLQPE 507
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 183/464 (39%), Positives = 278/464 (59%), Gaps = 5/464 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPDNYSF 79
SS+ D A +F + DV + T I + P A ++ + + A ++ P+ +
Sbjct: 178 SSMLLPD-ARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTL 236
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
A ++ + LGR +H V +G V++ AL+ M+ C C+ A++VFD + +
Sbjct: 237 VAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPI 296
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ +V W +MV+ YAK GDL NA LF+ + +NV+SW+ ++A Y+ + P+EAI +F
Sbjct: 297 K--DVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFN 354
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKS 258
M V+P + +++ LSACAQL ++++G W+++ YI + + L+NA IDM+AK
Sbjct: 355 DMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKC 414
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G +G A ++F NM++K+V++W TMI LHG EAL +F + + P+E T+I +L
Sbjct: 415 GDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVL 474
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
SAC H GLV GR +F MK YGIEP+ E Y CMIDLLG+ G LQEA ++ R MP A+
Sbjct: 475 SACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGAD 534
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
A WG+LL A ++G+VE+G+CA L L+P +SG Y ++S IYA +W + +R V
Sbjct: 535 EAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTV 594
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
MRD VKK PGCS IEV + HEF+ D SH + +Y L I
Sbjct: 595 MRDRRVKKNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 193/433 (44%), Gaps = 78/433 (18%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSD-----YAYSIFTHKSK-PDVYLYNTTIKALCQTDN 56
V GL N SR + C+ SD +A ++ ++ P+ Y+ T ++ +
Sbjct: 56 VSGLASNRFPASRLLAFCA---LSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGK 112
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVA 115
P +A+ L+ ++ L D + F +KA S+ IHC G + V
Sbjct: 113 PTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPT--EAIHCVAFKRGFIGQSVLAGN 170
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
AL+ MY S + DARK LF+ M +++V
Sbjct: 171 ALVHMYTSSMLLPDARK---------------------------------LFDEMADRDV 197
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+SWTTLI GYA+ P+EA +F RM V E+V P+E+ ++AA SA Q+G + LG +H
Sbjct: 198 VSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQ 257
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM----------------------- 271
I + G V L NAL+DM+ K G + A +VF+ M
Sbjct: 258 CIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLEN 317
Query: 272 --------KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
N++V++W+ M+A + + EA+ +F+ M A V+P + T +++LSAC
Sbjct: 318 AAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQ 377
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+ +++G ++ + +E ID+ + G + A +L M + N W
Sbjct: 378 LCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNME-DKNVVSWN 436
Query: 384 SLLAASNIYGDVE 396
+++ A ++G E
Sbjct: 437 TMIMAHGLHGQPE 449
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 284/521 (54%), Gaps = 70/521 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDN----PLNAVILYNKIQASALRPDNYSFPFVLK 84
A ++F H P+V+LYN+ I+A + P NA + ++Q + L PDN+++PF+LK
Sbjct: 72 AVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNA---FFQMQKNGLFPDNFTYPFLLK 128
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC-------------------- 124
A S++ L R IH G D+ V +LI Y+ C
Sbjct: 129 ACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDV 188
Query: 125 -----------KC--IYDARKVFDELSLR---VWN------------------------- 143
+C + A K+FDE+ R WN
Sbjct: 189 VTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWR 248
Query: 144 -VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ W+TMV GY+K GD++ AR LF+ KNV+ WTT+IAGYA+ EA L+ +M+
Sbjct: 249 NIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKME 308
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
++PD+ +L+ L+ACA+ G + LG+ IH + ++ + NA IDMYAK G +
Sbjct: 309 EAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLD 368
Query: 263 KALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A VF M K V++W +MI G A+HG G +AL++FS M + +P+ TF+ +L AC
Sbjct: 369 AAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCAC 428
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV GR+YF M+ YGI P++E YGCM+DLLGR G+L+EA LLR MP E NA I
Sbjct: 429 THAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAII 488
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
G+LL A ++ DV+L + L KLEP + GNY++LSNIYA G W +R M++
Sbjct: 489 LGTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKN 548
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
G +K G S IEV + VHEF D SHP D +YQ++ ++
Sbjct: 549 TGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRL 589
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 112/288 (38%), Gaps = 37/288 (12%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G D A +F +V L+ T I + A LY K++ + +RPD+
Sbjct: 261 SKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLL 320
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A + + LG+ IH V+ A I MYA C C+ A VF + +
Sbjct: 321 SILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAK 380
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V WN+M+ G+A G +A+ LF
Sbjct: 381 K-DVVSWNSMIQGFAMHG-------------------------------HGEKALELFSW 408
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M E +PD + L AC G V G ++ ++ + YG+ V ++D+ + G
Sbjct: 409 MVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGG 468
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
+ +A + +M + I T++ +H L R + ++E
Sbjct: 469 HLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFKLE 516
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 248/368 (67%), Gaps = 2/368 (0%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A+K+F ++S R N+ V M++GY++VG + +AR +F+ M EK+++ W+ +I+GYA+ D
Sbjct: 2 AQKLFTKISSR--NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESD 59
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+P EA+ LF MQV +KPD++ +L+ +SACA+LG ++ +WIH Y+++ GL +P+NN
Sbjct: 60 KPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNN 119
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
ALIDMYAK G +G A VFE M++++VI+WT+MI A+HG AL F +M+ +KP
Sbjct: 120 ALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKP 179
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
N +TF+ +L AC H GLVE GRR F M + + I PK E YGCM+DL GRA L++A +L
Sbjct: 180 NGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALEL 239
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ MP N IWGSL+AA I+G+ ELGE A + +++LEP + G LSNIYA RW
Sbjct: 240 VETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRW 299
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+ G++R +M+ G+ K GCS IE++ +V+EFV D H D++Y+ L ++ ++K
Sbjct: 300 QDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLV 359
Query: 490 EHLQNEFS 497
+ N S
Sbjct: 360 GYTPNTRS 367
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+L+ I S +G + A IF + D+ ++ I ++D P A+ L++++Q
Sbjct: 16 VLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFG 75
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
++PD + V+ A +L ++ + IH GL + V ALI MYA C + AR
Sbjct: 76 IKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAAR 135
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF+++ R NV W +M+ +A GD +N
Sbjct: 136 GVFEKMQSR--NVISWTSMINAFAIHGDASN----------------------------- 164
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN-- 249
A+ F +M+ EN+KP+ + + L AC+ G VE G + + I P +
Sbjct: 165 --ALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGR--RTFASMTNEHNITPKHEHY 220
Query: 250 -ALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
++D++ ++ + AL++ E M +V+ W +++A +HG
Sbjct: 221 GCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHG 263
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 282/505 (55%), Gaps = 39/505 (7%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
IF K +V +N I++ +A++++ + + PD+Y++P VLKA
Sbjct: 93 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 152
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ +G +IH V GLD +V V LI MY C C+ +A +V D++ R +V WN++V
Sbjct: 153 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCR--DVVSWNSLV 210
Query: 152 AGYAKVGDLNNA-------------------------------------RALFELMTEKN 174
AG A+ G ++A + +F + K+
Sbjct: 211 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS 270
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
++SW +IA Y P EA+ +F +M+ V PD I++ + L AC L A+ LG IH
Sbjct: 271 LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE 330
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y+ + L + L NALIDMYAK G + A +VF+ MK + V++WT+MI+ ++G GR+
Sbjct: 331 YVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRD 390
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ +FSRM+ + P+ I F+++LSAC H GL++ GR YF +M I P+IE + CM+
Sbjct: 391 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 450
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRAG + EA +++MP E N +WG+LL+A +Y ++ +G A L +L P SG
Sbjct: 451 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 510
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y +LSNIYA GRW + +R +M+ G+KKMPG S E+ RVH F+AGD SHP +
Sbjct: 511 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQ 570
Query: 475 LYQILCKINGQMKFAEHLQNEFSGV 499
+Y+ L G+MK A ++ S +
Sbjct: 571 IYEELDVSVGKMKEAGYVPETDSAL 595
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++ YA G+ + R +F+ + +KNV+ + +I Y ++A+ +F+ M + PD
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
L A + + +G IH + + GL+ V + N LI MY K G + +A +V +
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
M + V++W +++AG A +G +AL++ ME +KP+ T ++L A
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA 247
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 180/456 (39%), Positives = 274/456 (60%), Gaps = 4/456 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPDNYSFPFVLKAVV 87
A +F + DV + T I + P A ++ + + A ++ P+ + A
Sbjct: 185 ARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAG 244
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
++ + LGR +H V +G V++ AL+ M+ C C+ A++VFD + ++ +V W
Sbjct: 245 QMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIK--DVYSW 302
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+MV+ YAK GDL NA LF+ + +NV+SW+ ++A Y+ + P+EAI +F M V+
Sbjct: 303 TSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVE 362
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
P + +++ LSACAQL ++++G W+++ YI + + L+NA IDM+AK G +G A +
Sbjct: 363 PIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASR 422
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F NM++K+V++W TMI LHG EAL +F + + P+E T+I +LSAC H GL
Sbjct: 423 LFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGL 482
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V GR +F MK YGIEP+ E Y CMIDLLG+ G LQEA ++ R MP A+ A WG+LL
Sbjct: 483 VSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALL 542
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A ++G+VE+G+CA L L+P +SG Y ++S IYA +W + +R VMRD VKK
Sbjct: 543 NACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKK 602
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
PGCS IEV + HEF+ D SH + +Y L I
Sbjct: 603 NPGCSSIEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 192/433 (44%), Gaps = 78/433 (18%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSD-----YAYSIFTHKSK-PDVYLYNTTIKALCQTDN 56
V GL N SR + C+ SD +A ++ ++ P+ Y+ T ++ +
Sbjct: 56 VSGLASNRFPASRLLAFCA---LSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGK 112
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVA 115
P +A+ L+ ++ L D + F +KA S+ IHC G + V
Sbjct: 113 PTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPT--EAIHCVAFKRGFIGQSVLAGN 170
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
AL+ MY S + DARK LF+ M +++V
Sbjct: 171 ALVHMYTSSMLLPDARK---------------------------------LFDEMADRDV 197
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+SWTTLI GYA+ P+EA +F RM V E+V P+E+ ++AA SA Q+G + LG +H
Sbjct: 198 VSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQ 257
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---- 290
I + G V L NAL+DM+ K G + A +VF+ M K V +WT+M++ A G
Sbjct: 258 CIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLEN 317
Query: 291 ---------------------------LGREALDMFSRMERARVKPNEITFIAILSACCH 323
+ EA+ +F+ M A V+P + T +++LSAC
Sbjct: 318 AAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQ 377
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+ +++G ++ + +E ID+ + G + A +L M + N W
Sbjct: 378 LCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNME-DKNVVSWN 436
Query: 384 SLLAASNIYGDVE 396
+++ A ++G E
Sbjct: 437 TMIMAHGLHGQPE 449
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 279/468 (59%), Gaps = 39/468 (8%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI----QASA 71
F + + G +AY +F +PD ++YNT I+ T P +AV LY ++
Sbjct: 18 FASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGG 77
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC------K 125
+RPD +FPFVL+A + + G ++H V G +SD V ALI M+ASC
Sbjct: 78 VRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAA 137
Query: 126 CIYD-------------------------ARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
++D AR +FDE ++ ++ WN M+ YAK GD+
Sbjct: 138 ALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVK--DLVSWNVMITAYAKRGDM 195
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
AR LF+ + E++V+SW +I+GY + A+ LF +MQ KPD + ML+ LSAC
Sbjct: 196 ALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSAC 255
Query: 221 AQLGAVELGEWIHNYI-EQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A G +++G+ +H+ + + + N V L NALIDMYAK G + A +VF +M++K V T
Sbjct: 256 ADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVST 315
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +++ GLALHG E++DMF +M + +V+P+EITF+A+L AC H G+V+ GR +FN+M+
Sbjct: 316 WNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQ 375
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+Y +EP I+ YGC++D+LGRAG L+EA + + M E N+ IW +LL+A ++G++EL
Sbjct: 376 HKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELA 435
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+ A + L+K SG+Y +LSNIYA +G W S K+RK+M D GV K
Sbjct: 436 KHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 245/372 (65%), Gaps = 3/372 (0%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y + I AR++FD++ R N + WNTMV GYA+ G+++ A+ LF+ M +++
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSR--NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISW +I+GYAQ Q EA+ LF +M+ + + A+ ALS+CA++ A+ELG+ +H
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + G T NAL+ MY K G I +A VFE++ K +++W TMIAG A HG G+EA
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M + +KP+++T + +LSAC H GLV+ G YFN M YGI + Y CMID
Sbjct: 491 LALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L EA L++ MPF +AA WG+LL AS I+GD ELGE A + + ++EP NSG
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN+YA GRW E ++R MRD GVKK+PG S++E+ + H F GD SHP+ +R+
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 476 YQILCKINGQMK 487
Y L +++ ++K
Sbjct: 670 YAYLEELDLELK 681
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 46/321 (14%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y S ARKVF+++ R ++ WN M++GY K G+L+ ARALF M EK+V
Sbjct: 96 AMISGYLSNNKFDCARKVFEKMPDR--DLISWNVMLSGYVKNGNLSAARALFNQMPEKDV 153
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG------ 229
+SW +++G+AQ EA +F +M V+N EI+ LSA Q G +E
Sbjct: 154 VSWNAMLSGFAQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARRLFDS 209
Query: 230 --EW--------IHNYIEQYGLNTI------VPLN-----NALIDMYAKSGKIGKALQVF 268
+W + Y+ + L+ +P+ N +I YA++G + +A ++F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E + + V WT M++G +G+ EA +F M + NE+++ A+++ +E
Sbjct: 270 EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIE 325
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
R F+ M SR + M+ + G + +A+ L MP + + W ++++
Sbjct: 326 KARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISG 379
Query: 389 SNIYGDVELGECALQHLIKLE 409
Y E AL IK++
Sbjct: 380 ---YAQSGQSEEALHLFIKMK 397
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F + D + I Q+ A+ L+ K++ + + L +
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+++ +ELG+++H + V G + AL+ MY C I +A VF++++ + ++
Sbjct: 416 AEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK--DIVS 473
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WNTM+AGYA+ G A ALFE M +
Sbjct: 474 WNTMIAGYARHGFGKEALALFESMK--------------------------------MTI 501
Query: 207 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
KPD++ ++ LSAC+ G V+ G E+ ++ + YG+ +ID+ ++G++ +AL
Sbjct: 502 KPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEAL 561
Query: 266 QVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
+ ++M TW ++ +HG LG +A + ME
Sbjct: 562 NLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 23/323 (7%)
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
T +DSD+ I Y A VF+ + R + +N M++GY + AR
Sbjct: 54 TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRR--STVTYNAMISGYLSNNKFDCAR 111
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
+FE M ++++ISW +++GY + + A LF +M ++V ++ A LS AQ G
Sbjct: 112 KVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQNG 167
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
VE I +Q + + N L+ Y ++G+I A ++F++ + +++W ++
Sbjct: 168 FVEEARKI---FDQMLVKNEISW-NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMG 223
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
G +A +F RM ++I++ +++ GL+ RR F + R
Sbjct: 224 GYVRKKRLDDARSLFDRMP----VRDKISWNIMITGYAQNGLLSEARRLFEELPIR---- 275
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQH 404
+ + M+ + G L EA ++ MP E N W +++A Y + E A +
Sbjct: 276 -DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAG---YVQSQQIEKAREL 330
Query: 405 LIKLEPHNSGNYAILSNIYAILG 427
++ N+ ++ + YA G
Sbjct: 331 FDQMPSRNTSSWNTMVTGYAQCG 353
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/482 (38%), Positives = 278/482 (57%), Gaps = 37/482 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F K +++L+N I+ NA+ILY+K+ LRPDN++ PFVLKA
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
LS I GR IH + +G + D+ V AALI MYA C C+ DA +VFD++ +R + +WN
Sbjct: 161 LSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR--DAVLWN 218
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+M+A YA+ G P+E+I+L R M V+P
Sbjct: 219 SMLAAYAQNG-------------------------------HPDESISLCREMAANGVRP 247
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
E ++ +S+ A + + G IH + ++G + + ALIDMYAK G + AL +F
Sbjct: 248 TEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALF 307
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E ++ K V++W +I G A+HGL ALD+F +M R +P+ ITF+ +L+AC L++
Sbjct: 308 ERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM-RKEDRPDHITFVGVLAACSRGRLLD 366
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR +N+M YGI P ++ Y CMIDLLG G L EA L+R M + ++ +WG+LL +
Sbjct: 367 EGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNS 426
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I+G+VEL E AL+ LI+LEP +SGNY IL+N+YA G+W K+R+VM D +KK
Sbjct: 427 CKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNI 486
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESDVA 505
CS+IEV +V+ F+AGD SH + D +Y L ++ G M +A + F V E +
Sbjct: 487 ACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKT 546
Query: 506 SM 507
SM
Sbjct: 547 SM 548
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 187/432 (43%), Gaps = 58/432 (13%)
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+Y + +L++ + + G+++H Q G+ + + L+ +YA
Sbjct: 47 HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYA------------- 93
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
V N+++ NAR LF+ + ++N+ W LI GYA + AI
Sbjct: 94 ----------VSNSLL----------NARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAI 133
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L+ +M ++PD + L AC+ L A+ G IH Y+ + G + + ALIDMY
Sbjct: 134 ILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMY 193
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + A +VF+ + + + W +M+A A +G E++ + M V+P E T +
Sbjct: 194 AKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLV 253
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
++S+ V + GR + R+G + + +ID+ + G ++ A L R+
Sbjct: 254 TVISSSADVACLPYGRE-IHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLR- 311
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL--GRWNESG 433
E W +++ ++G L AL K+ + ++ + A GR + G
Sbjct: 312 EKRVVSWNAIITGYAMHG---LAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEG 368
Query: 434 K--IRKVMRDMGVKK-----------MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL- 479
+ ++RD G+ + C ++ ++ + + PD +L
Sbjct: 369 RALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD---EAYDLIRNMSVKPDSGVWGALLN 425
Query: 480 -CKINGQMKFAE 490
CKI+G ++ AE
Sbjct: 426 SCKIHGNVELAE 437
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G +++ + + ID + G A +F D L+N+ + A Q +P +
Sbjct: 174 VIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDES 233
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L ++ A+ +RP + V+ + ++ + GREIH G S+ V ALI M
Sbjct: 234 ISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDM 293
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A +F+ LR V WN ++ GYA G
Sbjct: 294 YAKCGSVKVALALFER--LREKRVVSWNAIITGYAMHG---------------------- 329
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQY 239
L G A+ LF +M+ E+ +PD I + L+AC++ ++ G ++N + Y
Sbjct: 330 LAVG---------ALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDY 379
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
G+ V +ID+ G++ +A + NM K W ++ +HG
Sbjct: 380 GITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHG 431
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 296/502 (58%), Gaps = 4/502 (0%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+GLD++ + + + +YA +F + DV ++T I++L + A+ L
Sbjct: 153 KGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALEL 212
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD--VHVVAALIQMY 121
++ +RP + ++ + + +G+ +H + + V AL+ MY
Sbjct: 213 IREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 272
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C + AR++F+ L+ + V W M+AG + L ARALF+ ++V+ WT +
Sbjct: 273 AKCGHLGLARQLFNGLTQKT--VVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAM 330
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
++ YAQ + ++A LF +M+ V+P ++ +++ LS CA GA++LG+W+H+YI++ +
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 390
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
LN AL+DMYAK G I A ++F ++ + W +I G A+HG G EALD+F+
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 450
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
MER VKPN+ITFI +L AC H GLV G++ F M +G+ P+IE YGCM+DLLGRAG
Sbjct: 451 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 510
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L EA ++++ MP + N +WG+L+AA ++ + +LGE A L+++EP N G ++SN
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSN 570
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
IYA RW+++ +RK M+ +G+KK PG S IEV+ VHEF+ GD SHP R+ ++L +
Sbjct: 571 IYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAE 630
Query: 482 INGQMKFAEHLQNEFSGVLESD 503
+ ++ A ++ + + +L D
Sbjct: 631 MRRKLNEAGYVPDTSTVLLNID 652
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 188/400 (47%), Gaps = 73/400 (18%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N I + + + P NA+ +Y +++ DN+ P VLKA ++S +LG+EIH +
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
GLD DV V AL+ MY C C+ AR VFD+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDK--------------------------- 184
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
M E++V+SW+T+I ++ + + A+ L R M V+P E+AM++ ++ A
Sbjct: 185 ------MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADT 238
Query: 224 GAVELGEWIHNYIEQYGLNTI--VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 281
+ +G+ +H Y+ + N VP AL+DMYAK G +G A Q+F + K+V++WT
Sbjct: 239 ANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 298
Query: 282 MIAG----------------------------LALHGLGR---EALDMFSRMERARVKPN 310
MIAG L+ + +A ++F +M + V+P
Sbjct: 299 MIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 358
Query: 311 EITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++T +++LS C G ++LG+ + I K R ++ + ++D+ + G + A +L
Sbjct: 359 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT--ALVDMYAKCGDINAAGRL 416
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ +W +++ ++G GE AL ++E
Sbjct: 417 FIE-AISRDICMWNAIITGFAMHG---YGEEALDIFAEME 452
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 293/498 (58%), Gaps = 2/498 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL N ++ + + S G D A +F + K DV+ +N I + ++ L
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + + P + + VL A K+ +L + +H + + + AL+ YA+C
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A ++F + R +V W ++V GY + G+L AR F+ M ++ ISWT +I G
Sbjct: 285 GEMDIAVRIFRSMKAR--DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDG 342
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + NE++ +FR MQ + PDE M++ L+ACA LG++E+GEWI YI++ +
Sbjct: 343 YLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKND 402
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + NALIDMY K G KA +VF +M + TWT M+ GLA +G G+EA+ +F +M+
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++P++IT++ +LSAC H G+V+ R++F M+S + IEP + YGCM+D+LGRAG ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA ++LR+MP N+ +WG+LL AS ++ D + E A + +++LEP N YA+L NIYA
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
RW + ++R+ + D+ +KK PG S IEV+ HEFVAGD SH + +Y L ++
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Query: 485 QMKFAEHLQNEFSGVLES 502
+ FA +L + + E+
Sbjct: 643 ESTFAAYLPDTSELLFEA 660
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 191/406 (47%), Gaps = 68/406 (16%)
Query: 2 IVRGLDQNNHLLSR-FIDSCSSLG-FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I RG+ N + F+ CS LG YAY +F +PDV ++N IK + D
Sbjct: 58 ITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGE 117
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKL-STIELGREIHCQTVGTGLDSDVHVVAALI 118
V LY + + PD+++FPF+L + + + G+++HC V GL S+++V AL+
Sbjct: 118 GVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+MY+ C + AR VFD +V WN M++GY +
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKE--DVFSWNLMISGYNR---------------------- 213
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
M + E+I L M+ V P + +L LSAC+++ +L + +H Y+ +
Sbjct: 214 ---------MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---LGR-- 293
+ L NAL++ YA G++ A+++F +MK + VI+WT+++ G G L R
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 294 --------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
E+L++F M+ A + P+E T +++L+AC H+G +
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
E+G + + I+ + +ID+ + G ++A+K+ M
Sbjct: 385 EIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
G ++ A LF + E +V+ W +I G++++D E + L+ M E V PD L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 218 SACAQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
+ + G A+ G+ +H ++ ++GL + + + NAL+ MY+ G + A VF+ + V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+W MI+G E++++ MER V P +T + +LSAC V +L +R
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ S EP + +++ G + A ++ R M + W S++ G+++
Sbjct: 262 V-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNLK 319
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
L A + ++ + ++ I+ + Y G +NES +I + M+ G+
Sbjct: 320 L---ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 293/498 (58%), Gaps = 2/498 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL N ++ + + S G D A +F + K DV+ +N I + ++ L
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + + P + + VL A K+ +L + +H + + + AL+ YA+C
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A ++F + R +V W ++V GY + G+L AR F+ M ++ ISWT +I G
Sbjct: 285 GEMDIAVRIFRSMKAR--DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDG 342
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + NE++ +FR MQ + PDE M++ L+ACA LG++E+GEWI YI++ +
Sbjct: 343 YLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKND 402
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + NALIDMY K G KA +VF +M + TWT M+ GLA +G G+EA+ +F +M+
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++P++IT++ +LSAC H G+V+ R++F M+S + IEP + YGCM+D+LGRAG ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA ++LR+MP N+ +WG+LL AS ++ D + E A + +++LEP N YA+L NIYA
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
RW + ++R+ + D+ +KK PG S IEV+ HEFVAGD SH + +Y L ++
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Query: 485 QMKFAEHLQNEFSGVLES 502
+ FA +L + + E+
Sbjct: 643 ESTFAAYLPDTSELLFEA 660
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 191/406 (47%), Gaps = 68/406 (16%)
Query: 2 IVRGLDQNNHLLSR-FIDSCSSLG-FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I RG+ N + F+ CS LG YAY +F +PDV ++N IK + D
Sbjct: 58 ITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGE 117
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKL-STIELGREIHCQTVGTGLDSDVHVVAALI 118
V LY + + PD+++FPF+L + + + G+++HC V GL S+++V AL+
Sbjct: 118 GVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+MY+ C + AR VFD +V WN M++GY +
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKE--DVFSWNLMISGYNR---------------------- 213
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
M + E+I L M+ V P + +L LSAC+++ +L + +H Y+ +
Sbjct: 214 ---------MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---LGR-- 293
+ L NAL++ YA G++ A+++F +MK + VI+WT+++ G G L R
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 294 --------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
E+L++F M+ A + P+E T +++L+AC H+G +
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
E+G + + I+ + +ID+ + G ++A+K+ M
Sbjct: 385 EIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
G ++ A LF + E +V+ W +I G++++D E + L+ M E V PD L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 218 SACAQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
+ + G A+ G+ +H ++ ++GL + + + NAL+ MY+ G + A VF+ + V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+W MI+G E++++ MER V P +T + +LSAC V +L +R
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ S EP + +++ G + A ++ R M + W S++ G+++
Sbjct: 262 V-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNLK 319
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
L A + ++ + ++ I+ + Y G +NES +I + M+ G+
Sbjct: 320 L---ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/464 (40%), Positives = 276/464 (59%), Gaps = 28/464 (6%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N I + + + P NA+ +Y +++ DN+ P VLKA ++S +LG+EIH +
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW----NTMVAGYAKVGD 159
GLD DV V AL+ MY C C+ AR VFD++ R +V W ++ YAK G
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER--DVVSWIPTTTALLDMYAKCGH 244
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L AR LF +T+K V+SWT +IAG + ++ E LF RMQ EN+ P+EI ML
Sbjct: 245 LGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNK--- 301
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
E+ ++ I LN AL+DMYAK G I A ++F ++ + W
Sbjct: 302 -----------------ERVEVDCI--LNTALVDMYAKCGDINAAGRLFIEAISRDICMW 342
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
+I G A+HG G EALD+F+ MER VKPN+ITFI +L AC H GLV G++ F M
Sbjct: 343 NAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVH 402
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+G+ P+IE YGCM+DLLGRAG L EA ++++ MP + N +WG+L+AA ++ + +LGE
Sbjct: 403 TFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGE 462
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
A L+++EP N G ++SNIYA RW+++ +RK M+ +G+KK PG S IEV+ V
Sbjct: 463 LAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTV 522
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
HEF+ GD SHP R+ ++L ++ ++ A ++ + + +L D
Sbjct: 523 HEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 566
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/507 (37%), Positives = 290/507 (57%), Gaps = 7/507 (1%)
Query: 2 IVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I GL Q++ SR + + SS G D++Y IF P + +N+ I+ + NP
Sbjct: 29 ITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTISNWNSIIRGFSKGKNPNP 88
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+V ++ K+ + PD+ ++PFV KAV +LS + L +HC+ GL D + +LI
Sbjct: 89 SVSVFVKMLRFGVCPDHLTYPFVAKAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIH 148
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY SC I ARKVFDE+ +R N WN M+ GYAK GDL++A +F M +++V+SW+
Sbjct: 149 MYGSCGDIGSARKVFDEMLIR--NSVSWNAMLDGYAKCGDLDSAHQVFXSMPDRDVVSWS 206
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++I G + + A+ +F RM+V K + + M++ L ACA LGA+E G +H Y+
Sbjct: 207 SMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVLCACAHLGALEXGRXMHQYMVDN 266
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFEN--MKNKSVITWTTMIAGLALHGLGREALD 297
+ + L +L+DMYAK G I +A+ VF M V+ W T+I GLA HGL E+L+
Sbjct: 267 TMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVXESLE 326
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M+ + P+EIT++ + SAC H GLV +F + + G+ PK E Y CM+D+L
Sbjct: 327 LFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSL-GKQGMVPKSEHYACMVDVL 385
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
RAG L EA + +MP E A++ G+LL + +L E + LI+LEP + G Y
Sbjct: 386 SRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYI 445
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
LSN+YA + W+ + +R+ M GVKK PG S++EV +H F+A D +H D +++Y
Sbjct: 446 GLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYM 505
Query: 478 ILCKINGQMKFAEHLQNEFSGVLESDV 504
+L I QM + + G + +V
Sbjct: 506 MLNTIVRQMMVDVDFETQERGFYDIEV 532
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/372 (45%), Positives = 244/372 (65%), Gaps = 3/372 (0%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y + I AR++FD++ R N + WNTMV GYA+ G+++ A+ LF+ M +++
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSR--NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISW +I+GYAQ Q EA+ LF +M+ + + A+ ALS+CA++ A+ELG+ +H
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + G T NAL+ MY K G I +A VFE++ K +++W TMIAG A HG G+EA
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M + +KP+++T + +LSAC H G V+ G YFN M YGI + Y CMID
Sbjct: 491 LALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L EA L++ MPF +AA WG+LL AS I+GD ELGE A + + ++EP NSG
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN+YA GRW E ++R MRD GVKK+PG S++E+ + H F GD SHP+ +R+
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 476 YQILCKINGQMK 487
Y L +++ ++K
Sbjct: 670 YAYLEELDLELK 681
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 46/321 (14%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y S ARKVF+++ R ++ WN M++GY K G+L+ ARALF M EK+V
Sbjct: 96 AMISGYLSNNKFDCARKVFEKMPDR--DLISWNVMLSGYVKNGNLSAARALFNQMPEKDV 153
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG------ 229
+SW +++G+AQ EA +F +M V+N EI+ LSA Q G +E
Sbjct: 154 VSWNAMLSGFAQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARRLFDS 209
Query: 230 --EW--------IHNYIEQYGLNTI------VPLN-----NALIDMYAKSGKIGKALQVF 268
+W + Y+ + L+ +P+ N +I YA++G + +A ++F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E + + V WT M++G +G+ EA +F M + NE+++ A+++ +E
Sbjct: 270 EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIE 325
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
R F+ M SR + M+ + G + +A+ L MP + + W ++++
Sbjct: 326 KARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISG 379
Query: 389 SNIYGDVELGECALQHLIKLE 409
Y E AL IK++
Sbjct: 380 ---YAQSGQSEEALHLFIKMK 397
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F + D + I Q+ A+ L+ K++ + + L +
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+++ +ELG+++H + V G + AL+ MY C I +A VF++++ + ++
Sbjct: 416 AEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK--DIVS 473
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WNTM+AGYA+ G A ALFE M +
Sbjct: 474 WNTMIAGYARHGFGKEALALFESMK--------------------------------MTI 501
Query: 207 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
KPD++ ++ LSAC+ G V+ G E+ ++ + YG+ +ID+ ++G++ +AL
Sbjct: 502 KPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEAL 561
Query: 266 QVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
+ ++M TW ++ +HG LG +A + ME
Sbjct: 562 NLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 23/323 (7%)
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
T +DSD+ I Y A VF+ + R + +N M++GY + AR
Sbjct: 54 TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRR--STVTYNAMISGYLSNNKFDCAR 111
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
+FE M ++++ISW +++GY + + A LF +M ++V ++ A LS AQ G
Sbjct: 112 KVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQNG 167
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
VE I +Q + + N L+ Y ++G+I A ++F++ + +++W ++
Sbjct: 168 FVEEARKI---FDQMLVKNEISW-NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMG 223
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
G +A +F RM ++I++ +++ GL+ RR F + R
Sbjct: 224 GYVRKKRLDDARSLFDRMP----VRDKISWNIMITGYAQNGLLSEARRLFEELPIR---- 275
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQH 404
+ + M+ + G L EA ++ MP E N W +++A Y + E A +
Sbjct: 276 -DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAG---YVQSQQIEKAREL 330
Query: 405 LIKLEPHNSGNYAILSNIYAILG 427
++ N+ ++ + YA G
Sbjct: 331 FDQMPSRNTSSWNTMVTGYAQCG 353
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 243/372 (65%), Gaps = 2/372 (0%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y K + AR++F+ + R N++ WNTM+ GY ++GD+ AR F++M +++
Sbjct: 302 AMIAGYVQTKKMDIARELFESMPCR--NISSWNTMITGYGQIGDIAQARKFFDMMPQRDC 359
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SW +IAGYAQ EA+ +F ++ + + ALS CA + A+ELG+ IH
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G T + NAL+ MY K G I +A FE ++ K V++W TM+AG A HG GR+A
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M+ A VKP+EIT + +LSAC H GL++ G YF M YG+ P + Y CMID
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EA+ L+R MPF+ AA WG+LL AS I+G+ ELGE A + + K+EP NSG
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 599
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN+YA GRW ++ K+R MRD+GV+K+PG S++EV ++H F GD SHP+ +R+
Sbjct: 600 YVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERI 659
Query: 476 YQILCKINGQMK 487
Y L +++ +M+
Sbjct: 660 YAYLEELDLKMR 671
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 140/308 (45%), Gaps = 43/308 (13%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y AR +FD++ R ++ WN M+ GY + L +AR LF+LM EK+V
Sbjct: 85 AMISGYLRNSKFNLARNLFDQMPER--DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDV 142
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE-------- 227
+SW +L++GYAQ +EA +F M +N I+ L+A G +E
Sbjct: 143 VSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAYVHNGRIEEACLLFES 198
Query: 228 -----LGEW---IHNYIEQYGLNTI------VPLN-----NALIDMYAKSGKIGKALQVF 268
L W + ++ + L +P+ N +I YA+ G + +A ++F
Sbjct: 199 KSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF 258
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ + V TWT M++G +G+ EA F M + NE+++ A+++ ++
Sbjct: 259 DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMD 314
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ R F M R I + MI G+ G + +A K MP + + W +++A
Sbjct: 315 IARELFESMPCR-----NISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAG 368
Query: 389 SNIYGDVE 396
G E
Sbjct: 369 YAQSGHYE 376
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 38/280 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A F + D + I Q+ + A+ ++ +I+ + +F L
Sbjct: 347 ARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCAD 406
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ +ELG++IH Q V G + V AL+ MY C I +A F+ + + +V WN
Sbjct: 407 IAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK--DVVSWN 464
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+AGYA+ G+ + +A+T+F M+ VKP
Sbjct: 465 TMLAGYAR--------------------------HGFGR-----QALTVFESMKTAGVKP 493
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
DEI M+ LSAC+ G ++ G E+ ++ + YG+ +ID+ ++G++ +A +
Sbjct: 494 DEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL 553
Query: 268 FENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
NM +W ++ +HG LG +A +M +ME
Sbjct: 554 IRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ WN ++ + + G ++A +F M ++ +S+ +I+GY + + N A LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
P+ +L W N ++ Y ++ ++G
Sbjct: 107 -----PER----------------DLFSW-----------------NVMLTGYVRNCRLG 128
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A ++F+ M K V++W ++++G A +G EA ++F M + N I++ +L+A
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYV 184
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G +E F KS + + + C++ R L +A L +MP +A W
Sbjct: 185 HNGRIEEACLLFE-SKSDW----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISW 238
Query: 383 GSLLAA 388
++++
Sbjct: 239 NTMISG 244
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 286/460 (62%), Gaps = 2/460 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F +++NT ++A + + + A LY + S P+N++F FV++A +
Sbjct: 64 YAERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACI 123
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ +++G H Q V G +S V LI +YA+C + AR +FD +S++ +V W
Sbjct: 124 DVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFD-MSIK-RDVVTW 181
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+++GY G + AR LF+ M EKN +SW LIAGY ++ EA+ +F MQV +
Sbjct: 182 TCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFR 241
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+ +++ AL+ACA LGA++ G WIH Y++++ ++ L ALIDMYAK G I A V
Sbjct: 242 LNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSV 301
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ M ++ V +T +I+GLA H A+D+F+RM+ V PNE+TF+ +L+AC +G+V
Sbjct: 302 FDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMV 361
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G R F M +RY IEP+I+ YGC++DLLGRAG ++EA++++R MP + ++ G+LL
Sbjct: 362 DEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLD 421
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A ++GDV+LGE + L++ + G + +LSN+YA +W ++ KIRK M D ++K+
Sbjct: 422 ACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKL 481
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
PGCS IEV+ V EFV GD S+ + + +L I+ Q+K
Sbjct: 482 PGCSSIEVNGTVCEFVTGDRSYALEEDIMFLLFGIDKQLK 521
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID + G + A S+F DVY + I L D A+ L+N++Q + P+
Sbjct: 285 LIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPN 344
Query: 76 NYSFPFVLKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
+F VL A ++ ++ G R + ++ + L+ + I +A++V
Sbjct: 345 EVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVV 404
Query: 135 DELSLR 140
E+ L+
Sbjct: 405 REMPLQ 410
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/467 (36%), Positives = 275/467 (58%), Gaps = 33/467 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F S+PD+ ++N+ + + NPL L+ +I + PDNY+FP +LKA
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+E GR++HC ++ GLD +V+V LI MY C+
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE---------------------- 178
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
D+++AR +F+ + E V+ + +I GYA+ ++PNEA++LFR MQ + +K
Sbjct: 179 -----------DVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+EI +L+ LS+CA LG+++LG+WIH Y +++ V +N ALIDM+AK G + A+ +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE M+ K W+ MI A HG +++ MF RM V+P+EITF+ +L+AC H G V
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E GR+YF+ M S++GI P I+ YG M+DLL AG L++A + + ++P +W LLA
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A + + +++L E + + +L+ + G+Y ILSN+YA +W +RKVM+D K+
Sbjct: 408 ACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKV 467
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
PGCS IEV+ VHEF +GD +L++ L ++ ++K + ++ +
Sbjct: 468 PGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD N ++ I+ + D A +F +P V YN I + + P A+ L+
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L+P+ + VL + L +++LG+ IH V V ALI M+A C
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA +F++ +R + W+ M+ YA G
Sbjct: 279 GSLDDAVSIFEK--MRYKDTQAWSAMIVAYANHG-------------------------- 310
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+ +++ +F RM+ ENV+PDEI L L+AC+ G VE G ++ + ++G+
Sbjct: 311 -----KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ +++D+ + +G + A + + + + + + W ++A + H
Sbjct: 366 SIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 243/372 (65%), Gaps = 2/372 (0%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y K + AR++F+ + R N++ WNTM+ GY ++GD+ AR F++M +++
Sbjct: 302 AMIAGYVQTKKMDIARELFESMPCR--NISSWNTMITGYGQIGDIAQARKFFDMMPQRDC 359
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SW +IAGYAQ EA+ +F ++ + + ALS CA + A+ELG+ IH
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G T + NAL+ MY K G I +A FE ++ K V++W TM+AG A HG GR+A
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M+ A VKP+EIT + +LSAC H GL++ G YF M YG+ P + Y CMID
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EA+ L+R MPF+ AA WG+LL AS I+G+ ELGE A + + K+EP NSG
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 599
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN+YA GRW ++ K+R MRD+GV+K+PG S++EV ++H F GD SHP+ +R+
Sbjct: 600 YVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERI 659
Query: 476 YQILCKINGQMK 487
Y L +++ +M+
Sbjct: 660 YAYLEELDLKMR 671
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR +FD++ R ++ WN M+ GY + L +AR LF+LM EK+V+SW +L++GYAQ
Sbjct: 99 ARNLFDQMPER--DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNG 156
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE-------------LGEW---IH 233
+EA +F M +N I+ L+A G +E L W +
Sbjct: 157 YVDEAREVFDNMPEKN----SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMG 212
Query: 234 NYIEQYGLNTI------VPLN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
++ + L +P+ N +I YA+ G + +A ++F+ + V TWT M
Sbjct: 213 GFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAM 272
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
++G +G+ EA F M + NE+++ A+++ +++ R F M R
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCR-- 326
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
I + MI G+ G + +A K MP + + W +++A G E
Sbjct: 327 ---NISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYE 376
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 38/280 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A F + D + I Q+ + A+ ++ +I+ + +F L
Sbjct: 347 ARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCAD 406
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ +ELG++IH Q V G + V AL+ MY C I +A F+ + + +V WN
Sbjct: 407 IAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK--DVVSWN 464
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+AGYA+ G+ + +A+T+F M+ VKP
Sbjct: 465 TMLAGYAR--------------------------HGFGR-----QALTVFESMKTAGVKP 493
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
DEI M+ LSAC+ G ++ G E+ ++ + YG+ +ID+ ++G++ +A +
Sbjct: 494 DEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL 553
Query: 268 FENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
NM +W ++ +HG LG +A +M +ME
Sbjct: 554 IRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 38/143 (26%)
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
+ GL++ G YF M Y + P + Y CMIDLLGR L+E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL AS I+G+ ELGE A Q K+ P NSG I K MRD+
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG--------------------ISK-MRDV 857
Query: 443 GVKKMPGCSYIEVSKRVHEFVAG 465
GV+K+PG S+ EV ++H F G
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG 880
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ WN ++ + + G ++A +F M ++ +S+ +I+GY + + N A LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
P+ +L W N ++ Y ++ ++G
Sbjct: 107 -----PER----------------DLFSW-----------------NVMLTGYVRNCRLG 128
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A ++F+ M K V++W ++++G A +G EA ++F M + N I++ +L+A
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYV 184
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G +E F KS + + + C++ R L +A L +MP +A W
Sbjct: 185 HNGRIEEACLLFE-SKSDW----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISW 238
Query: 383 GSLLAA 388
++++
Sbjct: 239 NTMISG 244
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 272/483 (56%), Gaps = 33/483 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL ++ +L++F S D A +F P +L+N I+ L+++ LY
Sbjct: 747 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 806
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+K+ L+PD ++FPF LK+ LS ++ G+ IH V G +D+ V AAL+ MYA C
Sbjct: 807 SKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKC 866
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
GD+ AR +F+ M ++++SWT++I+G
Sbjct: 867 ---------------------------------GDIEAARLVFDKMAVRDLVSWTSMISG 893
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YA +E + F M+ V P+ +++L+ L AC LGA+ GEW H+Y+ Q G
Sbjct: 894 YAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD 953
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + A++DMY+K G + A +F+ K ++ W+ MIA +HG GR+A+D+F +M +
Sbjct: 954 ILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVK 1013
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
A V+P+ +TF +LSAC H GL+E G+ YF +M + I K+ Y CM+DLLGRAG L
Sbjct: 1014 AGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLS 1073
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA L+ MP E +A+IWGSLL A I+ +++L E HL L+P ++G + +LSNIYA
Sbjct: 1074 EAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYA 1133
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
RWNE K+RK+M G K+ G S +E +VH+F GD SHP +++LY L ++
Sbjct: 1134 AKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAA 1193
Query: 485 QMK 487
MK
Sbjct: 1194 PMK 1196
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 273/487 (56%), Gaps = 34/487 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I R D + L++ ++ + G A ++F+ + DV ++T I + A
Sbjct: 232 VIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEA 291
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L++++ P++ + L+A +E G++IH V G + D V ALI M
Sbjct: 292 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDM 351
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C C + A LF+ + +K+V+SW
Sbjct: 352 YMKCSCP---------------------------------DEAVDLFQRLPKKDVVSWVA 378
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
L++GYAQ +++ +FR M + ++PD +A++ L+A ++LG + +H Y+ + G
Sbjct: 379 LLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG 438
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
N+ V + +LI++Y+K G +G A+++F+ M + V+ W++MIA +HG G EAL++F
Sbjct: 439 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFD 498
Query: 301 RM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M + + V+PN +TF++ILSAC H GLVE G + F+ M Y + P E +G M+DLLGR
Sbjct: 499 QMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGR 558
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G L +A ++ RMP A +WG+LL A I+ ++E+GE A ++L L+P ++G Y +L
Sbjct: 559 IGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILL 618
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIYA+ G+W+ ++R +++ G+KKM G S +EV VH F+A D HPD ++Y++L
Sbjct: 619 SNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELL 678
Query: 480 CKINGQM 486
K+ QM
Sbjct: 679 RKLEAQM 685
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 185/379 (48%), Gaps = 41/379 (10%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L+ C+SL A +F P+V+L+N+T+++ C+ + L++ + +A
Sbjct: 42 LNSLYAKCASL---QAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAG 98
Query: 73 R-PDNYSFPFVLKAVVKLSTIELGREIH-CQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
PDN++ P LKA L +ELG+ IH + SD+ V +AL+++Y+ C
Sbjct: 99 EAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKC------ 152
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
G + A +FE + + WT+++ GY Q +
Sbjct: 153 ---------------------------GQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185
Query: 191 PNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
P EA+ LF +M ++ V D + +++ +SACAQL V+ G +H + + + +PL N
Sbjct: 186 PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN 245
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+L+++YAK+G A +F M K VI+W+TMIA A + EAL++F M R +P
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEP 305
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
N +T ++ L AC +E G++ I + G E +ID+ + EA L
Sbjct: 306 NSVTVVSALQACAVSRNLEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCSCPDEAVDL 364
Query: 370 LRRMPFEANAAIWGSLLAA 388
+R+P + + W +LL+
Sbjct: 365 FQRLP-KKDVVSWVALLSG 382
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 177/381 (46%), Gaps = 36/381 (9%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASAL 72
S ++ S G A +F +PD L+ + + Q ++P A+ L+++ + +
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
D + V+ A +L ++ G +H + D D+ +V +L+ +YA C K
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGC----EK 258
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+ A LF M EK+VISW+T+IA YA + N
Sbjct: 259 I-----------------------------AANLFSKMPEKDVISWSTMIACYANNEAAN 289
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ LF M + +P+ + +++AL ACA +E G+ IH G ++ ALI
Sbjct: 290 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALI 349
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY K +A+ +F+ + K V++W +++G A +G+ +++ +F M ++P+ +
Sbjct: 350 DMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV 409
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
+ IL+A +G+ + + R G + +I+L + G L +A KL +
Sbjct: 410 AVVKILAASSELGIFQQALCLHGYV-VRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKG 468
Query: 373 MPFEANAAIWGSLLAASNIYG 393
M + IW S++AA I+G
Sbjct: 469 MIVR-DVVIWSSMIAAYGIHG 488
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H I YGL + MY +I A VFE++ N W MI G A G
Sbjct: 740 HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYG 351
+L+++S+M +KP++ F L +C GL +L R + + G +
Sbjct: 800 LSSLELYSKMMEKGLKPDKFAFPFALKSC--AGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELG 398
++D+ + G ++ A + +M + W S+++ A N Y LG
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISGYAHNGYNSETLG 905
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 2/166 (1%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+H+ + + G+ L +YAK + A +VF+ + +V W + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 292 GREALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
E L +F M A P+ T L AC + ++ELG+ K I +
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+++L + G + EA K+ + +W S++ D E
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPE 187
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 284/483 (58%), Gaps = 15/483 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ G + N+ + +D G D A F DV+++N + A
Sbjct: 137 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 196
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQ 119
+ ++ K+ ++P++ + + A LS + GREIH + LDSD+ V +L+
Sbjct: 197 LNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 256
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVA--GYAKVGDLNNARALFELM------- 170
YA C+ + AR+ F ++ ++ WN M+A G+ + GD A F+ M
Sbjct: 257 YYAKCRSVEVARRKFG--MIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVF 314
Query: 171 ---TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
+ ++V+ W ++I+ AQ + A+ L R M + NV+ + + M++AL AC++L A+
Sbjct: 315 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALR 374
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
G+ IH +I + GL+T + N+LIDMY + G I K+ ++F+ M + +++W MI+
Sbjct: 375 QGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYG 434
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+HG G +A+++F + +KPN ITF +LSAC H GL+E G +YF +MK+ Y ++P +
Sbjct: 435 MHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAV 494
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
EQY CM+DLL RAG E + + +MPFE NAA+WGSLL A I+ + +L E A ++L +
Sbjct: 495 EQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFE 554
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT 467
LEP +SGNY +++NIY+ GRW ++ KIR +M++ GV K PGCS+IEV +++H FV GDT
Sbjct: 555 LEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDT 614
Query: 468 SHP 470
SHP
Sbjct: 615 SHP 617
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 192/437 (43%), Gaps = 79/437 (18%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G+D L SR ++ G + A +F S+ +V+ + ++ C +
Sbjct: 36 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEET 95
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ + +RPD++ FP V KA +L +G++++ + G + + V +++ M
Sbjct: 96 IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDM 155
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
+ C + AR+ F+E+ + +V +WN MV+GY G+
Sbjct: 156 FIKCGRMDIARRFFEEIEFK--DVFMWNIMVSGYTSKGEF-------------------- 193
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQY 239
+A+ +FR+M +E VKP+ I + +A+SAC L + G IH Y I+
Sbjct: 194 -----------KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 242
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA--GLALHGLGREALD 297
L++ + + N+L+D YAK + A + F +K +++W M+A G +G G+ AL+
Sbjct: 243 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALE 302
Query: 298 MFSRMERA-----------------------------------------RVKPNEITFIA 316
F RM A V+ N +T ++
Sbjct: 303 FFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 362
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
L AC + + G+ + R G++ +ID+ GR G +Q++ ++ MP +
Sbjct: 363 ALPACSKLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-Q 420
Query: 377 ANAAIWGSLLAASNIYG 393
+ W +++ ++G
Sbjct: 421 RDLVSWNVMISVYGMHG 437
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 60/405 (14%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L+ KL + LG ++H Q V G+D + + L+++Y C+ DA
Sbjct: 16 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA----------- 64
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
R +F+ M+E+NV SWT ++ Y + E I LF M
Sbjct: 65 ----------------------RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 102
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E V+PD AC++L +G+ +++Y+ G + +++DM+ K G++
Sbjct: 103 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 162
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A + FE ++ K V W M++G G ++AL++F +M VKPN IT + +SAC
Sbjct: 163 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSAC 222
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
++ L+ GR ++ + ++D + ++ A + M + +
Sbjct: 223 TNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVS 281
Query: 382 WGSLLAASNI--YGDVELGECALQHLIKLE-------PHNSGNYAILSNIYAILGRWNES 432
W ++LA + YGD G+ AL+ ++ ++ + + ++I + + S
Sbjct: 282 WNAMLAVTGFTQYGD---GKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRS 338
Query: 433 GKIRKVMRDMG-----------VKKMPGCSYIEV---SKRVHEFV 463
++R+M V +P CS + K +H+F+
Sbjct: 339 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 383
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 278/478 (58%), Gaps = 34/478 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F S+PD+ ++N+ + ++ NPL L+ +I L PDNY+FP +LKA
Sbjct: 83 YARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACA 142
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+E GR++HC ++ G+D +V+V LI MY C+ + AR VFD + V +
Sbjct: 143 VAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPC--VVCY 200
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+ GYA+ N A ++LFR MQ +N+K
Sbjct: 201 NAMITGYARRNRPNEA-------------------------------LSLFREMQGKNLK 229
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+EI +L+ LS+CA LG+++LG+WIH Y +++G V +N ALIDM+AK G + A+ +
Sbjct: 230 PNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSI 289
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FENM+ K W+ MI A HG ++ MF RM V+P+EITF+ +L+AC H GLV
Sbjct: 290 FENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLV 349
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E GR YF+ M +GI P I+ YG M+DLLGRAG+L++A + + ++P +W LLA
Sbjct: 350 EEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLA 409
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A + + ++EL E + +++L+ + G+Y ILSN+YA +W +RKVM+D K+
Sbjct: 410 ACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKV 469
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVA 505
PGCS IEV+ VHEF +GD +L++ L ++ ++K A ++ + S V+ +D+
Sbjct: 470 PGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDT-SMVVHADMG 526
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+D N ++ I+ + D A +F +P V YN I + + P A+ L+
Sbjct: 161 GVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 220
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L+P+ + VL + L +++LG+ IH G V V ALI M+A C
Sbjct: 221 REMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKC 280
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA +F+ ++R + W+ M+ YA G N+ +FE
Sbjct: 281 GSLDDAVSIFE--NMRYKDTQAWSAMIVAYANHGQAENSMLMFE---------------- 322
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
RM+ ENV+PDEI L L+AC+ G VE G E+ + ++G+
Sbjct: 323 ---------------RMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVP 367
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ +++D+ ++G + A + + + + + + W ++A + H
Sbjct: 368 SIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSH 414
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/456 (39%), Positives = 282/456 (61%), Gaps = 35/456 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MIV +N+ SR + C S G YA +F + +P+ +++NT I+A + NP
Sbjct: 49 MIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPS 108
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY ++ + P ++FPF+LKA +++ ++H + GLD ++HVV L+
Sbjct: 109 EALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLV 168
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+ Y+ + +AR+VFDE+S R ++++W TM++GYA +N S
Sbjct: 169 RAYSVSCDVRNARRVFDEVSER--SLSIWTTMISGYA-----------------QNYCS- 208
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
NEA+ LF +M VE ++P+ + + LSACAQ G ++LGE IH ++E+
Sbjct: 209 -------------NEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEE 255
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ V L AL+ MYAK+G I A ++F+ + ++ TW MI GLA+HG +EALD
Sbjct: 256 KGIEVGVILGTALVHMYAKNGAILMAQKLFDTISERNTATWNAMICGLAVHGHAKEALDR 315
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F ++E+ ++ PN+ITF+ +LSACCH GL+ +GR+ F++MK YGIEPKIE YGCM+DLLG
Sbjct: 316 FWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLG 375
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G L EAE+L++ M ++A+ I G+LL + +G++E+ E ++ ++ LEPHN G Y +
Sbjct: 376 RGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVV 435
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
LSN+YA GRW + ++RKVM+ +KK PG S ++
Sbjct: 436 LSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVD 471
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 193/518 (37%), Positives = 281/518 (54%), Gaps = 64/518 (12%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQ-TDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
A ++F H P+V+LYN+ I+A T +P + ++Q + L PDN+++PF+LKA
Sbjct: 72 AVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACT 131
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC----------------------- 124
S++ L R IH G D+ V +LI Y+ C
Sbjct: 132 GPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTW 191
Query: 125 --------KC--IYDARKVFDELSLR---VWN--------------------------VA 145
+C + A K+FDE+ R WN +
Sbjct: 192 NSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIV 251
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
W+TMV GY+K GD++ AR LF+ KNV+ WTT+IAGYA+ EA L+ +M+
Sbjct: 252 SWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAG 311
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
++PD+ +++ L+ACA+ G + LG+ IH + ++ + NA IDMYAK G + A
Sbjct: 312 LRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAF 371
Query: 266 QVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
VF M K V++W +MI G A+HG G +AL++FSRM +P+ TF+ +L AC H
Sbjct: 372 DVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHA 431
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV GR+YF M+ YGI P++E YGCM+DLLGR G+L+EA LLR MP E NA I G+
Sbjct: 432 GLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGT 491
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A ++ DV+ + L K+EP + GNY++LSNIYA G W +R M + G
Sbjct: 492 LLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGG 551
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
+K G S IEV + VHEF D SHP D +Y+++ ++
Sbjct: 552 QKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRL 589
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 107/271 (39%), Gaps = 34/271 (12%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G D A +F +V L+ T I + A LY K++ + LRPD+
Sbjct: 261 SKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLI 320
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A + + LG+ IH V+ A I MYA C C+ A VF + +
Sbjct: 321 SILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAK 380
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V WN+M+ G+A G +A+ LF R
Sbjct: 381 K-DVVSWNSMIQGFAMHG-------------------------------HGEKALELFSR 408
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M E +PD + L AC G V G ++ ++ + YG+ V ++D+ + G
Sbjct: 409 MVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGG 468
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ +A + +M + I T++ +H
Sbjct: 469 HLKEAFTLLRSMPMEPNAIILGTLLNACRMH 499
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 189/502 (37%), Positives = 300/502 (59%), Gaps = 12/502 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+D+ LL R + + + YA +F P ++LYN I++ P +++LY
Sbjct: 15 GVDETKDLLQRLLLIPNLV----YARKLFDLHRNPCIFLYNKLIQSYSVHHQPHESIVLY 70
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + +RP++++F F+ A S+ R +H Q +G +SD ALI YA
Sbjct: 71 NLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTALITAYAKL 130
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR+VFDE+S R +V VWN M+ GY + GD+ A LF+ M KNV SWTT+I+G
Sbjct: 131 GALCCARRVFDEMSNR--DVPVWNAMITGYQRRGDMKAAMELFDSMPNKNVTSWTTVISG 188
Query: 185 YAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++Q +EA+T+F M+ + +VKP+ I +++ L ACA LG +E+G + Y + G
Sbjct: 189 FSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIGRRLEGYARENGFFD 248
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + NA ++MY+K G I A ++F+ + N +++I+W +MI LA HG EAL+++++M
Sbjct: 249 NIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLATHGKHDEALELYAQM 308
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ +P+ +TF+ +L AC H G+V G+ M+ + I PK+E YGCMIDLLGR G
Sbjct: 309 LQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLEHYGCMIDLLGRVGK 368
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA L++ MP + +A +WG+LL A + +G+VE+ E A + L+KLEP N GN I+SNI
Sbjct: 369 LQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKLEPTNPGNCVIMSNI 428
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSY-IEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
YA +W+ ++RK+M+ + K G SY +E VH+F D SHP +YQ+L +
Sbjct: 429 YAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTVEDKSHPRSYEIYQVLDE 488
Query: 482 INGQMKFAEHLQNEFSGVLESD 503
I+ +MK ++ F +L+ D
Sbjct: 489 ISRRMKPE---KSRFDSMLQLD 507
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 270/450 (60%), Gaps = 4/450 (0%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L +N LL+ FI C SL SDYA +F+H P+V ++N IK PL ++ ++
Sbjct: 32 LHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFS 91
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ + D Y++ +LK+ LS + G+ +H + + TG + ++++Y S
Sbjct: 92 SMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGG 151
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ DA+KVFDE+S R NV VWN M+ G+ GD+ LF+ M+E++++SW ++I+
Sbjct: 152 RMGDAQKVFDEMSER--NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSL 209
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTI 244
++ + EA+ LF M + PDE ++ L A LG ++ G+WIH+ E GL
Sbjct: 210 SKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDF 269
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-E 303
+ + NAL+D Y KSG + A +F M+ ++V++W T+I+G A++G G +D+F M E
Sbjct: 270 ITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIE 329
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+V PNE TF+ +L+ C + G VE G F +M R+ +E + E YG M+DL+ R+G +
Sbjct: 330 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRI 389
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
EA K L+ MP ANAA+WGSLL+A +GDV+L E A L+K+EP NSGNY +LSN+Y
Sbjct: 390 TEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLY 449
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
A GRW + K+R +M+ ++K G S I
Sbjct: 450 AEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 285/501 (56%), Gaps = 46/501 (9%)
Query: 1 MIVRGLDQNNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+++G ++ L F + G + +A +F PD ++YNT I+ +D P
Sbjct: 31 MVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYNTLIRGAAHSDAPR 90
Query: 59 NAVILYNKIQASA-------LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDV 111
+AV +Y ++ + LRPD +FPFVL+A + E G ++H V G +SD
Sbjct: 91 DAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVVKAGCESDA 150
Query: 112 HVVAALIQMYAS------CKCIYD-------------------------ARKVFDELSLR 140
V ALI M+A+ ++D AR++FDE ++
Sbjct: 151 FVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVK 210
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN M+ YAK+GD+ AR LF+ +++V+SW +I+GY + +A+ LF +
Sbjct: 211 --DLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQ 268
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP---LNNALIDMYAK 257
MQ KPD + ML+ LSACA G ++ G +H ++ + I P L NALIDMYAK
Sbjct: 269 MQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGR-FSRIGPTTALGNALIDMYAK 327
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + AL+VF M++K+V TW ++I GLALHG E++ +F +M + VKP+EITF+A+
Sbjct: 328 CGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAV 387
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
L+AC H G+V+ G YF++M+ RY IEP I+ YGCM+D+L R G L+EA + + M E
Sbjct: 388 LAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEP 447
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
N IW +LL A I+G++EL E A + L+K SG++ +LSNIYA +G W S +RK
Sbjct: 448 NPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRK 507
Query: 438 VMRDMGVKKMPGCSYIEVSKR 458
+M D GV K G + I+ S +
Sbjct: 508 LMDDSGVNKEAGRAVIDSSSK 528
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/453 (40%), Positives = 265/453 (58%), Gaps = 14/453 (3%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F P++ L+N+ + Q+++ Y +I + ++ ++ +
Sbjct: 3 YARQLFDQIPDPNIALWNSMFRGYAQSES-------YREIFCEMFERNVVAWTSMINGYI 55
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ + R + + DV + ++ Y + +ARK+F E+ R +V W
Sbjct: 56 LSADLVSARRLF----DLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNR--DVMFW 109
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 206
NT++ GYA G++ LFE M E+N+ SW LI GYA E + F+RM E +V
Sbjct: 110 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 169
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
P++ ++ LSACA+LGA++LG+W+H Y E GL V + NAL+DMYAK G I A+
Sbjct: 170 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 229
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF M K +I+W T+I GLA+H G +AL++F +M+ A KP+ ITFI IL AC H+GL
Sbjct: 230 VFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGL 289
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G YF M Y I P+IE YGCM+D+L RAG L++A +R+MP EA+ IW LL
Sbjct: 290 VEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLL 349
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A IY +VEL E ALQ LI+LEP N NY +LSNIY GRW + +++ MRD G KK
Sbjct: 350 GACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKK 409
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+PGCS IEV+ V EF + D HP + +Y +L
Sbjct: 410 LPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVL 442
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 178/456 (39%), Positives = 282/456 (61%), Gaps = 35/456 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MIV +N+ SR + C S G YA +F + +P+ +++NT I+A + NP
Sbjct: 51 MIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPS 110
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY ++ + P ++FPF+LKA +++ ++H + GLD ++HVV L+
Sbjct: 111 EALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLV 170
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+ Y+ + +AR+VFDE+S R ++++W TM++GYA +N S
Sbjct: 171 RAYSVSCDVRNARRVFDEVSER--SLSIWTTMISGYA-----------------QNYCS- 210
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
NEA+ LF +M VE ++P+ + + LSACAQ G ++LGE IH ++E+
Sbjct: 211 -------------NEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEE 257
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ V L AL+ MYAK+G I A ++F+ + ++ TW MI GLA+HG +EALD
Sbjct: 258 KGIEVGVILGTALVHMYAKNGAILMAQKLFDXISERNTATWNAMICGLAVHGHAKEALDR 317
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F ++E+ ++ PN+ITF+ +LSACCH GL+ +GR+ F++MK YGIEPKIE YGCM+DLLG
Sbjct: 318 FWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLG 377
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G L EAE+L++ M ++A+ I G+LL + +G++E+ E ++ ++ LEPHN G Y +
Sbjct: 378 RGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVV 437
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
LSN+YA GRW + ++RKVM+ +KK PG S ++
Sbjct: 438 LSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVD 473
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 285/501 (56%), Gaps = 46/501 (9%)
Query: 1 MIVRGLDQNNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+++G ++ L F + G + +A +F PD ++YNT I+ +D P
Sbjct: 31 MVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYNTLIRGAAHSDAPR 90
Query: 59 NAVILYNKIQASA-------LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDV 111
+AV +Y ++ + LRPD +FPFVL+A + E G ++H V G +SD
Sbjct: 91 DAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVVKAGCESDA 150
Query: 112 HVVAALIQMYAS------CKCIYD-------------------------ARKVFDELSLR 140
V ALI M+A+ ++D AR++FDE ++
Sbjct: 151 FVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVK 210
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN M+ YAK+GD+ AR LF+ +++V+SW +I+GY + +A+ LF +
Sbjct: 211 --DLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQ 268
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP---LNNALIDMYAK 257
MQ KPD + ML+ LSACA G ++ G +H ++ + I P L NALIDMYAK
Sbjct: 269 MQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGR-FSRIGPTTALGNALIDMYAK 327
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + AL+VF M++K+V TW ++I GLALHG E++ +F +M + VKP+EITF+A+
Sbjct: 328 CGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAV 387
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
L+AC H G+V+ G YF++M+ RY IEP I+ YGCM+D+L R G L+EA + + M E
Sbjct: 388 LAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEP 447
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
N IW +LL A I+G++EL E A + L+K SG++ +LSNIYA +G W S +RK
Sbjct: 448 NPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRK 507
Query: 438 VMRDMGVKKMPGCSYIEVSKR 458
+M D GV K G + I+ S +
Sbjct: 508 LMDDSGVNKEAGRAVIDSSSK 528
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 281/486 (57%), Gaps = 37/486 (7%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
+C L + + + H++K ++ + I + P A++LY K++ PD +
Sbjct: 126 ACGDLKSARFLFERMGHRNK---VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
++ A +L + +G ++H + + +AL+ MYA C
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC-------------- 228
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
GDL AR +F+ +++K+V +W+ LI GY + ++ EA+ LF
Sbjct: 229 -------------------GDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF 269
Query: 199 RRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
R + N++P+E+ +LA +SACAQLG +E G W+H+YI + V LNN+LIDM++K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G I A ++F++M K +I+W +M+ G ALHGLGREAL F M+ ++P+EITFI +
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGV 389
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
L+AC H GLV+ G++ F +++ YG+ K E YGCM+DLL RAG L EA + +R MP +
Sbjct: 390 LTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQP 449
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
+ AIWGS+L A +Y ++ELGE A + L+KLEP N G Y +LSNIYA WNE K+R+
Sbjct: 450 DGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRE 509
Query: 438 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 497
+M + G++K PGCS + + H F+AGD SHP+ + +L ++ ++K A ++ +
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSE 569
Query: 498 GVLESD 503
+L D
Sbjct: 570 VLLNID 575
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 207/399 (51%), Gaps = 43/399 (10%)
Query: 1 MIVRGLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
M+V G + L++ I S SLG YAYS+F H + DV +N+ ++A ++ P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVG-YAYSVFAHTRELDVLTWNSMLRAFVNSNMP 59
Query: 58 LNAVILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A+ Y + ++ S PD ++FP +LK L ++G+ +H Q V L SD+++
Sbjct: 60 RRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETT 119
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ MYA+C + AR +F+ + R N VW +M++GY K N+
Sbjct: 120 LLNMYAACGDLKSARFLFERMGHR--NKVVWTSMISGYMK----NHC------------- 160
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
PNEA+ L+++M+ + PDE+ M +SACA+L + +G +H++I
Sbjct: 161 --------------PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI 206
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ + L +AL++MYAK G + A QVF+ + +K V W+ +I G + EAL
Sbjct: 207 REMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEAL 266
Query: 297 DMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMI 354
+F + + ++PNE+T +A++SAC +G +E GR + I +++ G + +I
Sbjct: 267 QLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKG--HSVSLNNSLI 324
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
D+ + G + A+++ M ++ + W S++ ++G
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHG 362
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 188/495 (37%), Positives = 295/495 (59%), Gaps = 20/495 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I G Q + + C+ L +D YA IF + + P+V+LY I A +P
Sbjct: 66 LISHGHSQTQFFAFKLVRFCN-LTLADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPK 124
Query: 59 NAVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A +LY N ++ A+RP+N+ +P VL++ + + +H Q + +G V A+
Sbjct: 125 AAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAI 184
Query: 118 IQMYASCKC-IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
+ Y+ I AR++FDE+ R V W M++GYA++G+ ++A LFE M E++V
Sbjct: 185 VDSYSRFSSDIGSARQMFDEMLERT--VVSWTAMISGYARLGNFDSAIELFESMPERDVP 242
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQV----------ENVKPDEIAMLAALSACAQLGAV 226
+W LIAG AQ EAI LF+RM + EN KP++ + +ALSAC G +
Sbjct: 243 AWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDREN-KPNKTTLGSALSACGHTGML 301
Query: 227 ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 286
LG+WIH Y+ + ++NAL+DMY K G + A +VF+ + K++ +W ++I L
Sbjct: 302 HLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINCL 361
Query: 287 ALHGLGREALDMFSRMERAR--VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
ALHG A+D+F+ + VKPNE+TF+ +L+AC H GLVE G YF +M+ Y IE
Sbjct: 362 ALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIE 421
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQH 404
P+IE +GC+IDLLGRAG +EA +++R M E + +WGSLL A I+G +L E +++
Sbjct: 422 PQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKK 481
Query: 405 LIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA 464
LI+++P N G +L+NIYA G+W+E K+R+++++ K PGCS+IEV +V++F +
Sbjct: 482 LIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQVYQFYS 541
Query: 465 GDTSHPDFDRLYQIL 479
D SHP + +Y+ L
Sbjct: 542 FDMSHPSVEEIYKTL 556
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 180/476 (37%), Positives = 285/476 (59%), Gaps = 8/476 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+S G ++ ++F PD++L+ I A +LY ++ +S + P+ ++F
Sbjct: 75 ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFS 134
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+LK+ + + G+ IH + GL D +V L+ +YA + A+KVFD + R
Sbjct: 135 SLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPER 190
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ M+ YAK G++ ARALF+ M E++++SW +I GYAQ PN+A+ LF++
Sbjct: 191 --SLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 201 MQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+ E KPDEI ++AALSAC+Q+GA+E G WIH +++ + V + LIDMY+K G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAIL 318
+ +A+ VF + K ++ W MIAG A+HG ++AL +F+ M+ ++P +ITFI L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
AC H GLV G R F M YGI+PKIE YGC++ LLGRAG L+ A + ++ M +A+
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ +W S+L + ++GD LG+ ++LI L NSG Y +LSNIYA +G + K+R +
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M++ G+ K PG S IE+ +VHEF AGD H +Y +L KI+ ++K ++ N
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 38/273 (13%)
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
YA G + ++ ALF + ++ +T I + ++A L+ ++ + P+E
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ L +C + + G+ IH ++ ++GL + L+D+YAK G + A +VF+ M
Sbjct: 133 FSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 273 NKS-------------------------------VITWTTMIAGLALHGLGREALDMFSR 301
+S +++W MI G A HG +AL +F +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 302 -MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+ + KP+EIT +A LSAC +G +E GR +KS I ++ +ID+ +
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR-IRLNVKVCTGLIDMYSKC 307
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G L+EA + P + W +++A ++G
Sbjct: 308 GSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHG 339
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
LN L YA GKI +L +F + + +T I +++GL +A ++ ++ +
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 307 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ PNE TF ++L +C + G+ + +++K GI+P + ++D+ + G +
Sbjct: 126 INPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVAT--GLVDVYAKGGDVVS 179
Query: 366 AEKLLRRMP 374
A+K+ RMP
Sbjct: 180 AQKVFDRMP 188
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 181/455 (39%), Positives = 279/455 (61%), Gaps = 7/455 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + ++ + +D + LG + +F + D +N I + AV +Y
Sbjct: 138 GLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFEEAVDVY 197
Query: 65 NKIQ-ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++Q S +P+ + L A L +ELG+EIH + LD + AL+ MY
Sbjct: 198 RRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIH-DYIANELDLTPIMGNALLDMYCK 256
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C+ AR++FD + ++ NV W +MV GY G L+ AR LFE ++V+ WT +I
Sbjct: 257 CGCVSVAREIFDAMIVK--NVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMIN 314
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q + +AI LF MQ+ V+PD+ ++ L+ CAQLGA+E G+WIHNYI++ +
Sbjct: 315 GYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKM 374
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
++ ALI+MYAK G I K+L++F +K+ +WT++I GLA++G EAL++F M+
Sbjct: 375 DAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQ 434
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP++ITF+A+LSAC H GLVE GR+ F+ M S Y IEP +E YGC IDLLGRAG L
Sbjct: 435 TCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLL 494
Query: 364 QEAEKLLRRMPFEANAAI---WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
QEAE+L++++P + N I +G+LL+A YG++++GE L K++ +S + +L+
Sbjct: 495 QEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLA 554
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
+IYA RW + K+R M+D+G+KK+PG S IEV
Sbjct: 555 SIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEV 589
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 222/455 (48%), Gaps = 78/455 (17%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL Q+ +L++ + SSLG +YA IF H P +++YN IKA + + +A+
Sbjct: 35 GLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAIS 94
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+ +++ + PDNY++P+VLK + + + G +IH V TGL+ D +V +L+ MYA
Sbjct: 95 LFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYA 154
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ +VF+E+ R + WN M++GY + FE
Sbjct: 155 ELGLVEGFTQVFEEMPER--DAVSWNIMISGYVRC-------KRFE-------------- 191
Query: 183 AGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
EA+ ++RRMQ+E N KP+E +++ LSACA L +ELG+ IH+YI L
Sbjct: 192 ----------EAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAN-EL 240
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL---------- 291
+ + NAL+DMY K G + A ++F+ M K+V WT+M+ G + G
Sbjct: 241 DLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFER 300
Query: 292 ---------------------GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
+A+ +F M+ V+P++ + +L+ C +G +E G
Sbjct: 301 SPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQG 360
Query: 331 RRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
+ N I ++R ++ + +I++ + G ++++ ++ + + + W S++
Sbjct: 361 KWIHNYIDENRIKMDAVVST--ALIEMYAKCGCIEKSLEIFNGLK-DMDTTSWTSIICGL 417
Query: 390 NIYGD----VELGECALQHLIKLEPHNSGNYAILS 420
+ G +EL E A+Q L+P + A+LS
Sbjct: 418 AMNGKTSEALELFE-AMQ-TCGLKPDDITFVAVLS 450
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 298/486 (61%), Gaps = 5/486 (1%)
Query: 14 SRFIDSCSS-LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY-NKIQASA 71
SR + C+S LG DYAY +F P+++ +NT I+ Q+ NP A+ L+ + + +S
Sbjct: 60 SRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQ 119
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
+ P ++P + KA +L G ++H + + GL D + ++ MYA+ + +AR
Sbjct: 120 VEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEAR 179
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
++F++ ++V WN+M+ G AK G+++ +R LF+ M KN ISW ++I GY +
Sbjct: 180 RIFNQE--MEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMF 237
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA+ LF +MQ E ++P E M++ L+A AQ+GA+ G WIH YI++ L + A+
Sbjct: 238 KEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAI 297
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMY K G IG ALQVFE + +S+ +W +MI GLA++G +EA+ +F +E + +KP+
Sbjct: 298 IDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDC 357
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
I+F+A+L+AC H +V+ G +F+ MK+ Y IEP I+ Y M+D++ RAG+L+EAE+ ++
Sbjct: 358 ISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIK 417
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP E +A IWG LL+A IYG+ E+ + A + + +L+P + Y +++NI+A +
Sbjct: 418 TMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVG 477
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS-HPDFDRLYQILCKINGQMKFAE 490
+ + R MR V+K PG S+IEV + VHEF+AG H +Y +L ++ ++
Sbjct: 478 AMEKRVAMRMKKVEKEPGGSFIEVDEEVHEFIAGGGRLHRKAQEIYIVLGQLGVMLQDKG 537
Query: 491 HLQNEF 496
+ +EF
Sbjct: 538 AVGDEF 543
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 268/417 (64%), Gaps = 4/417 (0%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
P+ +F F+ A ++ G+ IH + +G D DV+ + AL+ MYA + AR+V
Sbjct: 8 PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQV 67
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
FDE+++R ++ WN+++AGY++ GD+ A LF+LM ++V+SWTT+I+GY+Q +
Sbjct: 68 FDEMTVR--DIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTK 125
Query: 194 AITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
A+ +F +M+ + V+P+E+ + + SACA+LGA+E+GE I +Y GL + ++N L+
Sbjct: 126 ALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLL 185
Query: 253 DMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+MYA+ GKI A VF + K +++ +W +M+ GLA+HG EAL ++ +M ++P++
Sbjct: 186 EMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDD 245
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF+ ++ AC H GLV G + F M++ + I PK+E YGCM+DLLGRAG LQEA L++
Sbjct: 246 VTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVK 305
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP + ++ IWG+LL A + + +VE E A + L ++EP N GNY IL NIYA RW+
Sbjct: 306 SMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDG 365
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
K+RK+M+ + K G S IE +H+F+ D SHP +Y +L +I+ +MK
Sbjct: 366 VAKLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEISTKMKL 422
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK--- 257
M ++ P+E+ ACA ++ G+ IH + + G + V AL+DMYAK
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 258 ----------------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
SG + AL++F+ M ++SV++WTTMI+G + +
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 290 GLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
G+ +AL+MF +ME+ + V+PNE+T ++ SAC +G +E+G R + + G+ +
Sbjct: 121 GMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDN-GLMKNLY 179
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
++++ R G + A + + N W S++ ++G
Sbjct: 180 VSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHG 224
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 45/295 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N L++ + S G + A +F V + T I Q A
Sbjct: 71 MTVRDIPTWNSLIAGY----SRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKA 126
Query: 61 VILYNKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ ++ K++ +RP+ + V A KL +E+G I GL +++V L++
Sbjct: 127 LEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLE 186
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA C I AR VF+E+ R N+ WN+M+ G A G
Sbjct: 187 MYARCGKIDAARHVFNEIGKRR-NLCSWNSMMMGLAVHG--------------------- 224
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+ NEA+ L+ +M E ++PD++ + + AC G V G + +E
Sbjct: 225 ----------RSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETN 274
Query: 240 GLNTIVPL---NNALIDMYAKSGKIGKALQVFEN--MKNKSVITWTTMIAGLALH 289
+IVP ++D+ ++G++ +A + ++ MK SVI W T++ + H
Sbjct: 275 --FSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVI-WGTLLGACSFH 326
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 281/460 (61%), Gaps = 3/460 (0%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
SS YA S F + P + YN I+ + L+A+ + +++ ++ PD +S+P
Sbjct: 82 SSFSLLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYP 141
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
F LKA L + L + +H Q G SD++V+ +LI +Y+ C+ A +VFDE S R
Sbjct: 142 FALKACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDR 201
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V +N +V G+ K G+ AR +F+LM ++ +SW +LIAGYAQ NEAI LF
Sbjct: 202 --DVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDL 259
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M ++PD IA+++ALSACAQLG +E G+ IH+YI++ + L+ L+D YAKSG
Sbjct: 260 MMGLKLEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGC 319
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
I A++VFE +KS+ITW M+ G+A+HG L+ FSRM A +KP+ I+F+ +L
Sbjct: 320 IDTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVG 379
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H GLV+ ++ F+ M+S YG+ +++ YGCM DLL RAG ++EA +L + +P +
Sbjct: 380 CSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIF 439
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM- 439
+W LL I+G++E+ E A + +++L+P + G Y+IL+N+YA RW + KIR+ M
Sbjct: 440 VWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMS 499
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ VKK G S I++ HEF+AG++ H +Y +L
Sbjct: 500 SNRAVKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVL 539
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 265/430 (61%), Gaps = 29/430 (6%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
P+ +++PFVLKA + + LG+ +H + G +V+V L+ MY C+
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCR-------- 59
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
G + AR +F+ M + + +SW+ +I GY ++ + ++
Sbjct: 60 ---------------------GGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSD 98
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
AI LFR MQ++ V PDEI M++ LSAC LGA+ELG+W+ +Y+E+ + V L+NALID
Sbjct: 99 AINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALID 158
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
M+AK G + KA +F +M+ +++++WT++I GLA+HG G EA+ +F M R+ V P+++
Sbjct: 159 MFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVV 218
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
FI +LSAC H GLV+ G+RYF+ M+ + I PKIE YGCM+D+L RAG ++EA K ++ M
Sbjct: 219 FIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEM 278
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P + N +W +L+ A +G+++LGE + LI+ EP + NY +LSNIYA + W +
Sbjct: 279 PIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKT 338
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
+IR+ M G+KK+PG + IE+ ++EFVAGD SH +Y+++ ++ +MK A ++
Sbjct: 339 RIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMP 398
Query: 494 NEFSGVLESD 503
+L+ D
Sbjct: 399 TTTEVLLDID 408
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 113/269 (42%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G ++A +F K D ++ I + +A+ L+ ++Q + PD + VL
Sbjct: 63 GGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVL 122
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L +ELG+ + + +V + ALI M+A C + A +F S+R N
Sbjct: 123 SACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFR--SMRERN 180
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ W +++ G A G + EA+ +F M
Sbjct: 181 IVSWTSVIGGLAMHG-------------------------------RGVEAVAVFEEMVR 209
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
V PD++ + LSAC+ G V+ G+ + + + + + + ++DM ++G +
Sbjct: 210 SGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVK 269
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALHG 290
+AL+ + M + + + W T+I HG
Sbjct: 270 EALKFVQEMPIDPNPVVWRTLINACRAHG 298
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 278/465 (59%), Gaps = 2/465 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G +F +P + L+ I+A P A+ L+ ++ L PD + V+
Sbjct: 140 GLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVV 199
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L + + + +HC +G++ D V + LI Y C + A + F E ++ N
Sbjct: 200 SACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK--N 257
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ VWNTM+ + +L + LF+ M +++V+SW ++I G+A++ Q EA+T F M+
Sbjct: 258 IVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEF 317
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V P+ + +L+ LSACA GA++ G WIH Y+++ +N L+++LIDMY+K G I K
Sbjct: 318 SGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDK 377
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A+Q+FE + + TWT+++ GLA+HG G +AL FS+M+ A+V+P+++T + +LSAC H
Sbjct: 378 AVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAH 437
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL++ G YF M+ +G+ PK+E YG M+DLLGR G L+EA L+ MP EAN IWG
Sbjct: 438 AGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWG 497
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+ L+A ++ +VELGE A + L+ L P + +LSN+YA +W+ S +RK ++ G
Sbjct: 498 AFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKG 557
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+KK PGCS IEV+ VH F+ GD SHP + + ++ KI M+
Sbjct: 558 LKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKLMRL 602
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 180/410 (43%), Gaps = 85/410 (20%)
Query: 40 DVYLYNTTIK-----ALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIEL 94
+V+++NT I+ L D PL + Y + + LRP+ ++F ++LKA+V ++
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPL---LYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKE 109
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY 154
G E+H V TG V AL+ Y +C + R+VFDE
Sbjct: 110 GEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDE------------------ 151
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
M + ++ WT +I Y + P +A+ LFR M+ + PD +A+
Sbjct: 152 ---------------MRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVS 196
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL--------- 265
+SAC LG + + + +H +IE+ G+ +++ LI Y + G + A
Sbjct: 197 TVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK 256
Query: 266 ----------------------QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
Q+F++M ++ V++W +MI G A G +EAL F ME
Sbjct: 257 NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEME 316
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ V PN +T ++ LSAC G ++ G + + + + +ID+ + G +
Sbjct: 317 FSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDI 375
Query: 364 QEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+A E+ RR F W S++ ++G GE AL + K++
Sbjct: 376 DKAVQIFEESTRRDLF-----TWTSIVCGLAMHGR---GEKALHYFSKMK 417
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 136/343 (39%), Gaps = 73/343 (21%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN-------- 56
G++ + + S I + G DYAY F ++ ++NT I + +N
Sbjct: 222 GIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLF 281
Query: 57 ---PLNAVILYN--------------------KIQASALRPDNYSFPFVLKAVVKLSTIE 93
P V+ +N +++ S + P+ + L A ++
Sbjct: 282 QSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALD 341
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
G IH ++ D + ++LI MY+ C I A ++F+E
Sbjct: 342 TGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE----------------- 384
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
T +++ +WT+++ G A + +A+ F +M+ V+PD++ M
Sbjct: 385 ----------------STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTM 428
Query: 214 LAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ LSACA G ++ G W +E+ +GL V ++D+ + G + +A + M
Sbjct: 429 VGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMP 488
Query: 273 NKS-VITWTTMIAGLALHG---LG----REALDMFSRMERARV 307
++ I W ++ +H LG R L + R ARV
Sbjct: 489 MEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARV 531
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 282/470 (60%), Gaps = 2/470 (0%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
+ + D+A +F P+VYLY + I + +A+ L+ ++ + DNY+ +
Sbjct: 72 VNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAM 131
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
LKA V + G+E+H + +GL D + L+++Y C + DARK+FD + R
Sbjct: 132 LKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPER-- 189
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V M+ G + A +F M ++ + WT +I G + + N + +FR MQ
Sbjct: 190 DVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQ 249
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
V+ V+P+E+ + LSACAQLGA+ELG WIH Y+ + G+ + ALI+MY++ G I
Sbjct: 250 VKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDID 309
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+A +F+ ++ K V T+ +MI GLALHG EA+++FS M + RV+PN ITF+ +L+AC
Sbjct: 310 EAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACS 369
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLV+LG F M+ +GIEP++E YGCM+D+LGR G L+EA + RM EA+ +
Sbjct: 370 HGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKML 429
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
SLL+A I+ ++ +GE + L + +SG++ +LSN YA LGRW+ + ++R+ M
Sbjct: 430 CSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKG 489
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
G+ K PGCS IEV+ +HEF +GD HP+ R+Y+ L ++N KF +L
Sbjct: 490 GIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYL 539
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
Y KV +++A LF NV +T+LI G+ +AI LF +M ++V D A+
Sbjct: 69 YCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAV 128
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---------------- 257
A L AC A+ G+ +H + + GL + L+++Y K
Sbjct: 129 TAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPE 188
Query: 258 ---------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
G + +A++VF M + + WT +I GL +G L++F M
Sbjct: 189 RDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREM 248
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ V+PNE+TF+ +LSAC +G +ELGR M+ + G+E G +I++ R G
Sbjct: 249 QVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMR-KCGVEVNRFVAGALINMYSRCGD 307
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ EA+ L + + + + + S++ ++G
Sbjct: 308 IDEAQALFDGVRVK-DVSTYNSMIGGLALHG 337
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I SC G + A +F D + I L + + ++ ++Q + P+
Sbjct: 198 IGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNE 257
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+F VL A +L +ELGR IH G++ + V ALI MY+ C I +A+ +FD
Sbjct: 258 VTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFD- 316
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+RV +V+ +N+M+ G A G + EA+
Sbjct: 317 -GVRVKDVSTYNSMIGGLALHG-------------------------------KSIEAVE 344
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMY 255
LF M E V+P+ I + L+AC+ G V+LG I +E +G+ V ++D+
Sbjct: 345 LFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDIL 404
Query: 256 AKSGKIGKALQVFENM 271
+ G++ +A M
Sbjct: 405 GRVGRLEEAFDFIGRM 420
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ N + I+ S G D A ++F DV YN+ I L + AV L+
Sbjct: 287 GVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELF 346
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
+++ +RP+ +F VL A ++LG EI
Sbjct: 347 SEMLKERVRPNGITFVGVLNACSHGGLVDLGGEI 380
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 295/477 (61%), Gaps = 13/477 (2%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL-NAVILYNKI-QASALRPDN 76
+C+SL YA+ +F +PD+++YNT IKA + + N++I++ + Q L P+
Sbjct: 59 ACASL---SYAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNR 115
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
YSF F A ++ G ++ V GL+++V VV ALI MY + +++KVF
Sbjct: 116 YSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQW 175
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
R ++ WNT++A Y G+++ A+ LF+ M E++V+SW+T+IAGY Q+ EA+
Sbjct: 176 AVDR--DLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALD 233
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
F +M KP+E +++AL+AC+ L A++ G+WIH YI + + L ++IDMYA
Sbjct: 234 FFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYA 293
Query: 257 KSGKIGKALQVF-ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K G+I A +VF E+ + V W MI G A+HG+ EA+++F +M+ ++ PN++TFI
Sbjct: 294 KCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFI 353
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
A+L+AC H +VE G+ YF +M S Y I P+IE YGCM+DLL R+G L+EAE ++ MP
Sbjct: 354 ALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPM 413
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ AIWG+LL A IY D+E G + + ++P++ G + +LSNIY+ GRWNE+ +
Sbjct: 414 APDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARIL 473
Query: 436 R---KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
R ++ RD KK+PGCS IE+ H+F+ GD SHP +Y L ++ ++K A
Sbjct: 474 REKNEISRDR--KKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSA 528
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 274/476 (57%), Gaps = 10/476 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA SIF + + +NT IK + + ++L++++ L PDN++ P V+K
Sbjct: 68 YARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCA 126
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL---SLRVWNV 144
+L ++ G++IH + G SDV V +L+ MY+ C I ARKVFD + + +WN
Sbjct: 127 RLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNS 186
Query: 145 AV------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
+ WN M+ GY K GD ++A LF M ++++W +IAGY Q +A+ +F
Sbjct: 187 LIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMF 246
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
M +P +++ LSA + L + G WIH+Y+E+ G L +LI+MYAK
Sbjct: 247 FMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKC 306
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G I AL VF ++ K V WT +I GL +HG+ AL +F M + +KPN I FI +L
Sbjct: 307 GCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVL 366
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+AC H GLV+ GR+YF++M + Y IEP +E YGC++D+L RAG+L+EA+ + MP N
Sbjct: 367 NACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPN 426
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
IW SLL S +G +++GE A Q +I++ P G Y +LSN+YA G W + +R++
Sbjct: 427 KVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREM 486
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M G +K PGCS +E +HEF+ GD SHP +Y + ++ ++K H+ +
Sbjct: 487 MYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPD 542
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 47/281 (16%)
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
K+ DL AR++F+ + +++I W T+I Y + ++ I LF + V PD +
Sbjct: 62 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPC 120
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
+ CA+LG V+ G+ IH + G + V + +L++MY+K G+I A +VF+ M +K
Sbjct: 121 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 180
Query: 276 V------------------------------------------ITWTTMIAGLALHGLGR 293
V +TW MIAG L+G
Sbjct: 181 VVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 240
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYGC 352
+A+ MF M + +P+ T +++LSA GL LG+ R+ + + G E
Sbjct: 241 DAVKMFFMMLKLGSRPSHATLVSVLSAVS--GLAVLGKGRWIHSYMEKNGFELDGILGTS 298
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+I++ + G ++ A + R + + W +++ I+G
Sbjct: 299 LIEMYAKCGCIESALTVFRAIQ-KKKVGHWTAIIVGLGIHG 338
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F D+ +N I ++AV ++ + RP + + VL
Sbjct: 206 GDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVL 265
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
AV L+ + GR IH G + D + +LI+MYA C CI A VF + +
Sbjct: 266 SAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKK--K 323
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W ++ G I G A N A+ LF M
Sbjct: 324 VGHWTAIIVGLG--------------------------IHGMA-----NHALALFLEMCK 352
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+KP+ I + L+AC G V+ G ++ + +Y + + L+D+ ++G +
Sbjct: 353 TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLE 412
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALHG 290
+A ENM + + + W +++ G HG
Sbjct: 413 EAKNTIENMPISPNKVIWMSLLGGSRNHG 441
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 247 LNNALIDMYA--KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+++ L+ +Y+ K +G A +F+ ++ +S+I W T+I + + + +F +
Sbjct: 50 VSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH 109
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ P+ T ++ C +G+V+ G++ + +K +G + ++ G ++++ + G +
Sbjct: 110 EYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQ--GSLVNMYSKCGEI 166
Query: 364 QEAEKLLRRMPFEANAAIWGSLL 386
A K+ M + + +W SL+
Sbjct: 167 DCARKVFDGM-IDKDVVLWNSLI 188
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 307/555 (55%), Gaps = 68/555 (12%)
Query: 1 MIVRGLDQNNHLLSRF-IDSCSSLGFSDYAYSIFTHKS-KPDVYLYNTTIKALCQTDNPL 58
M+ ++ N + ++F + S S++G YA +F + + D +L N+ IKA +T +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIG-YARKLFDQRPHREDSFLCNSMIKAYLETRHYN 59
Query: 59 NAVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++ Y + + + L PDN++F + K+ + G ++H Q +G +D++V +
Sbjct: 60 DSFAFYRDLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGV 119
Query: 118 IQMYASCKCIYDARKVFDELSLR------------------------------VWNVAVW 147
+ MYA + AR VFDE+ R V +V ++
Sbjct: 120 VDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIY 179
Query: 148 NTMVAGYAKVGDLNNARALFELMT-------------------------------EKNVI 176
N M+ G+ K GD+ +AR LF+ MT E+N++
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLV 239
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
SW T+I GY Q QP EAI LF+ MQ ++ PD++ +L+ L A + GA+ LGEW H +
Sbjct: 240 SWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+++ L+ V + A++DMY+K G+I KA ++F+ M K V +W MI G AL+G A
Sbjct: 300 VQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAA 359
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
LD+F M + KP+EIT +A++SAC H GLVE GR++F +M+ ++G+ KIE YGCM+D
Sbjct: 360 LDLFLTMAKEE-KPDEITMLAVISACNHGGLVEEGRKWFQMMR-KFGLNAKIEHYGCMVD 417
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L++AE L+ MPF+ N I S L+A Y D+E E L+ ++LEP N GN
Sbjct: 418 LLGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L N+YA RW++ G ++ +MR KK GCS IE++ V EF++GDT+HP +
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSI 537
Query: 476 YQILCKINGQMKFAE 490
+ +L K+ MK E
Sbjct: 538 HLVLEKLLVHMKEEE 552
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/476 (38%), Positives = 285/476 (59%), Gaps = 8/476 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ GL+ + ++ + F+D + LG + +F D +N I + A
Sbjct: 134 VVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEA 193
Query: 61 VILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V +Y ++ S +P+ + L A L +ELG+EIH + + LD + AL+
Sbjct: 194 VDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIH-DYIASELDLTTIMGNALLD 252
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C + AR++FD ++++ NV W +MV GY G L+ AR LFE ++++ WT
Sbjct: 253 MYCKCGHVSVAREIFDAMTVK--NVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWT 310
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q ++ E I LF MQ+ VKPD+ ++ L+ CAQ GA+E G+WIHNYI++
Sbjct: 311 AMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDEN 370
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ + ALI+MYAK G I K+ ++F +K K +WT++I GLA++G EAL++F
Sbjct: 371 RIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELF 430
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+ +KP++ITF+A+LSAC H GLVE GR+ F+ M S Y IEP +E YGC IDLLGR
Sbjct: 431 KAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGR 490
Query: 360 AGYLQEAEKLLRRMPFEANAAI---WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
AG LQEAE+L++++P + N I +G+LL+A YG++++GE L K++ +S +
Sbjct: 491 AGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLH 550
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA-GDTSHPD 471
+L++IYA RW + K+R M+D+G+KK+PG S IEV + + ++ G PD
Sbjct: 551 TLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGKWQQRLSEGPFPFPD 606
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 206/425 (48%), Gaps = 74/425 (17%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL Q+ L++ + SSLG +YA IF + P +++YN IKA ++ + +A+
Sbjct: 35 GLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAIS 94
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+ +++ + PDNY++P+VLK + + + G ++H V TGL+ D +V + + MYA
Sbjct: 95 LFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYA 154
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ +VF+E+ R + WN M++GY + FE
Sbjct: 155 ELGLVEGFTQVFEEMPDR--DAVSWNIMISGYVRC-------KRFE-------------- 191
Query: 183 AGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYG 240
EA+ ++RRM E N KP+E +++ LSACA L +ELG+ IH+YI +
Sbjct: 192 ----------EAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIASELD 241
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L TI + NAL+DMY K G + A ++F+ M K+V WT+M+ G + G +A ++F
Sbjct: 242 LTTI--MGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFE 299
Query: 301 R-------------------------------MERARVKPNEITFIAILSACCHVGLVEL 329
R M+ VKP++ + +L+ C G +E
Sbjct: 300 RSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQ 359
Query: 330 GRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ N I ++R ++ + +I++ + G ++++ ++ + E + W S++
Sbjct: 360 GKWIHNYIDENRIKVDAVVGT--ALIEMYAKCGCIEKSFEIFNGLK-EKDTTSWTSIICG 416
Query: 389 SNIYG 393
+ G
Sbjct: 417 LAMNG 421
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 151/322 (46%), Gaps = 20/322 (6%)
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
+ +GD N A +F + + ++ + +I + + AI+LF++++ V PD
Sbjct: 53 SSLGDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYP 112
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
L +G V GE +H ++ + GL + N+ +DMYA+ G + QVFE M ++
Sbjct: 113 YVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDR 172
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRY 333
++W MI+G EA+D++ RM + KPNE T ++ LSAC + +ELG+
Sbjct: 173 DAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEI 232
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + S + + ++D+ + G++ A ++ M + N W S++ I G
Sbjct: 233 HDYIASELDLTTIMGN--ALLDMYCKCGHVSVAREIFDAMTVK-NVNCWTSMVTGYVICG 289
Query: 394 DVELGECALQHLIKLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK------ 446
++ ++L + P + + + N Y R+ E+ + M+ GVK
Sbjct: 290 QLDQA----RNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVV 345
Query: 447 --MPGCSY---IEVSKRVHEFV 463
+ GC+ +E K +H ++
Sbjct: 346 TLLTGCAQSGALEQGKWIHNYI 367
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 281/479 (58%), Gaps = 33/479 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G Q+ ++ + SCS DYA IF + P+VYLY I + N +A
Sbjct: 55 LIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDA 114
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY+++ ++ PDNY +LKA + GRE+H + + GL S+ V ++++
Sbjct: 115 IQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMEL 174
Query: 121 YASCKCIYDARKVFDELSLRV--WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
Y C + DAR+VF+E+ V + W M+ G+ + ++
Sbjct: 175 YGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEM------------------ 216
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
N A+ FR MQ ENV+P+E ++ LSAC+QLGA+E+G W+H+Y+ +
Sbjct: 217 -------------NRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 263
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ + + + NALI+MY++ G I +A VF+ MK++ VIT+ TMI+GL+++G R+A+++
Sbjct: 264 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIEL 323
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M R++P +TF+ +L+AC H GLV+ G + F+ M YG+EP+IE YGCM+DLLG
Sbjct: 324 FRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLG 383
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G L+EA L+R M + + G+LL+A ++ ++ELGE + L +SG Y +
Sbjct: 384 RVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVL 443
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
LS++YA G+W E+ ++R M++ G++K PGCS IEV+ +HEF+ GD HP +R+Y+
Sbjct: 444 LSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYE 502
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGRE---------IHCQTVGTGLDSDVHVVAALIQMYASC 124
P++ S P LK++ + I L + IH Q + G D +V L++ + C
Sbjct: 18 PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 77
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I + A +F+ NV +T LI G
Sbjct: 78 HAI---------------------------------DYASRIFQYTHNPNVYLYTALIDG 104
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+ +AI L+ RM +++ PD M + L AC A+ G +H+ + GL++
Sbjct: 105 FVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSN 164
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKN----KSVITWTTMIAGLALHGLGREALDMFS 300
+ ++++Y K G++G A +VFE M K + WT MI G + AL+ F
Sbjct: 165 RLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFR 224
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M+ V+PNE T + +LSAC +G +E+GR + M+ ++ IE + +I++ R
Sbjct: 225 GMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR-KFEIELNLFVGNALINMYSRC 283
Query: 361 GYLQEAEKLLRRM 373
G + EA+ + M
Sbjct: 284 GSIDEAQTVFDEM 296
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/472 (37%), Positives = 280/472 (59%), Gaps = 10/472 (2%)
Query: 24 GFSDYAYSIFTHKS----KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
G D A +F+ +P++ +N I + AV+++ + PD +
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTI 253
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
VL AV L + +G IH + GL SD V +ALI MY C C + +VFD++
Sbjct: 254 SSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDH 313
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAI 195
+V N + G ++ G + ++ LF + ++ NV+SWT++IA +Q + EA+
Sbjct: 314 --MDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEAL 371
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LFR MQ+ VKP+ + + L AC + A+ G+ H + + G++T V + +ALIDMY
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G+I + F+ + K+++ W +IAG A+HG +EA+++F M+R+ KP+ I+F
Sbjct: 432 AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+LSAC GL E G YFN M S+YGIE ++E Y CM+ LL RAG L++A ++RRMP
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+A +WG+LL++ ++ +V LGE A + L +LEP N GNY +LSNIYA G WNE ++
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRV 611
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
R +M++ G++K PGCS+IEV +VH +AGD SHP ++ + L K++ +MK
Sbjct: 612 RDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMK 663
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 214/432 (49%), Gaps = 45/432 (10%)
Query: 5 GLDQNNHLLSRFIDS-CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
GL + HL ++ + +++ F+D A + +P+V+ ++T I A + +A+
Sbjct: 43 GLFNDTHLATKLLSHYANNMCFAD-ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALST 101
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++++ L PDN P +KA LS ++ R++H +G DSD V ++L+ MY
Sbjct: 102 FSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIK 161
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVISWT 179
C I DA +VFD + +V W+ +VA YA+ G ++ A+ LF M + N+ISW
Sbjct: 162 CNQIRDAHRVFDRMFEP--DVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWN 219
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+IAG+ +EA+ +F M + +PD + + L A L + +G IH Y+ +
Sbjct: 220 GMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQ 279
Query: 240 GLNTIVPLNNALIDMYAK-------------------------------SGKIGKALQVF 268
GL + +++ALIDMY K +G++ +L++F
Sbjct: 280 GLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLF 339
Query: 269 ENMKNK----SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+K++ +V++WT+MIA + +G EAL++F M+ A VKPN +T +L AC ++
Sbjct: 340 RQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNI 399
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
+ G+ + R GI + +ID+ + G +Q + +P + N W +
Sbjct: 400 AALMHGKAA-HCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNA 457
Query: 385 LLAASNIYGDVE 396
++A ++G +
Sbjct: 458 VIAGYAMHGKAK 469
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/451 (39%), Positives = 260/451 (57%), Gaps = 23/451 (5%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F PDV LYNT I+A + PL A ++ ++Q S + DN+++PF+LKA
Sbjct: 68 AVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSG 127
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ + IH Q G D+ V +LI Y + +AR++FDE+ R + WN
Sbjct: 128 KVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPER--DTVSWN 185
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
T++ GY K G++N A LFE M +NV+SW+T+ AG +K
Sbjct: 186 TILDGYVKAGEMNAAFELFEKMPARNVVSWSTMEAG---------------------LKF 224
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D+ +++ LSACA G + LG+ +H IE+ P++NALIDMYAK G + AL +F
Sbjct: 225 DDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIF 284
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
M K V++W +I GLA+HG G +AL +FSRM+ P+++TF+ +L AC H G V+
Sbjct: 285 HGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVD 344
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G YF+ M+ YG+ P++E YGCM+DLLGR G L+EA +L+ MP E NA IWG+LL A
Sbjct: 345 EGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGA 404
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
++ L E L+K E +SGN ++LSNIYA G W+ IR M+ ++K
Sbjct: 405 CRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPS 464
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
G S IEV VHEF D SHP DR+Y+ +
Sbjct: 465 GGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 495
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
V ++A ++ + A +F + + +V+ + TLI + + +P A ++F MQ
Sbjct: 51 VGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSG 110
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
V D L AC+ V + E IH +E+ G + + N+LID Y K G++G+A
Sbjct: 111 VCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEAR 170
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME----------RARVKPNEITFI 315
++F+ M + ++W T++ G G A ++F +M A +K ++ T I
Sbjct: 171 RLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVI 230
Query: 316 AILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+ILSAC GL+ LG+R + +I ++R+ + +ID+ + G L+ A + M
Sbjct: 231 SILSACAVSGLLGLGKRVHASIERTRFKCSTPVSN--ALIDMYAKCGSLENALSIFHGM- 287
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ W +++ ++G GE ALQ +++
Sbjct: 288 VRKDVVSWNAIIQGLAMHGH---GEKALQLFSRMK 319
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
++ L C+ L V+ IH + + L+ + LI ++ ++ A+ VF +++
Sbjct: 21 ISDLHRCSSLNQVK---QIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQD 77
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
V+ + T+I + A +F M+ + V + T+ +L AC G+ +
Sbjct: 78 PDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACS-------GKVW 130
Query: 334 FNIMKSRYGIEPKIEQYG---------CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
+++ I ++E+ G +ID + G L EA +L MP E + W +
Sbjct: 131 VRVVEM---IHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMP-ERDTVSWNT 186
Query: 385 LL 386
+L
Sbjct: 187 IL 188
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 300/505 (59%), Gaps = 17/505 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G Q N++L+ + S G A +F + P ++N IK ++ +
Sbjct: 50 IVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKS 109
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ ++ + + + +++ F+L A V+ G +IH + + G S+++V LI +
Sbjct: 110 IELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINL 169
Query: 121 YASCKCIYD-----ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
YA+ D AR +FDE+ NV WN+++AGY + GD + AR +F+ M E+NV
Sbjct: 170 YANGGDGGDFDLKRARYLFDEMPDS--NVVGWNSLLAGYVRRGDFDGARKVFDEMPERNV 227
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+WT ++AG+AQ Q A++LF +M+ V+ D++A++AALSACA+LG + LG+WIH Y
Sbjct: 228 RTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGY 287
Query: 236 IEQY----GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+E+ L +V LNNALI MYA G + A +VFE + ++ ++W+++I G A G
Sbjct: 288 VERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGC 347
Query: 292 GREALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
G EA+ +F M + V+P+EITFI L+AC H GL+ G R F M +G+ P+IE
Sbjct: 348 GVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIE 407
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL-IK 407
YGCM+DLL RAG L EA L+ MP + N A+WG+LL+ ++ + E+ +HL +
Sbjct: 408 HYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFE 467
Query: 408 LEPHN--SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
+ P+N +G + +L+N+YA GRW ++ +R+ M D+GVKK G S+IE++ + F+ G
Sbjct: 468 IHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVG 527
Query: 466 DTSHPDFDRLYQILCKINGQMKFAE 490
+ +H D + +Y++L I Q + E
Sbjct: 528 EETHKDVNLIYEMLGNITRQTQMGE 552
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 149/321 (46%), Gaps = 26/321 (8%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VLK+ V + +IH Q V +G +++ L+ +Y S + A+KVF++++
Sbjct: 33 VLKSCVSFRNLA---KIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAP- 88
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITL 197
+ VWN ++ G+ + + LF+ MT E N +++ L++ + E +
Sbjct: 89 -STTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 198 FRRMQVEN------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
R+ V V+ + I + A G +L + + E N + N+L
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYA---NGGDGGDFDLKRARYLFDEMPDSNVVGW--NSL 202
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+ Y + G A +VF+ M ++V TWT M+AG A +G + AL +F +M RA V+ ++
Sbjct: 203 LAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQ 262
Query: 312 ITFIAILSACCHVGLVELGRRYFNIM----KSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+ +A LSAC +G + LG+ + +SR+ + + +I + G + A
Sbjct: 263 VALVAALSACAELGDLTLGKWIHGYVERTWRSRH-LPVLVSLNNALIHMYASCGVMDLAY 321
Query: 368 KLLRRMPFEANAAIWGSLLAA 388
K+ +P + N W S++
Sbjct: 322 KVFEEIP-QRNTVSWSSIITG 341
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH I G + + N L+ +Y G +G A +VFE++ S W +I G
Sbjct: 46 IHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKT 105
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY 350
++++++F RM A V+ N T+ +LSAC L G + + ++ + Y +
Sbjct: 106 SKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTN 165
Query: 351 GCMIDLLGRAG-----YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+I+L G L+ A L MP ++N W SLLA GD +
Sbjct: 166 --LINLYANGGDGGDFDLKRARYLFDEMP-DSNVVGWNSLLAGYVRRGDFD 213
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/469 (39%), Positives = 285/469 (60%), Gaps = 6/469 (1%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNP-LNAVILYNK-IQASALRPDNYSFPFVLKA 85
YA+ +F +PD+++YNT IK+ + + L+++ ++ I+ S P+ YSF F A
Sbjct: 228 YAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGA 287
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ G ++ V GLD +V VV ALI M+ + DAR VFD R +
Sbjct: 288 CGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDR--DFY 345
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WNTM+ Y G++ A+ LF+ M E++V+SW+T+IAGY Q+ EA+ F +M
Sbjct: 346 SWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSE 405
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
VKP+E M++AL+AC+ L A++ G+WIH YI + + L +LIDMYAK G+I A
Sbjct: 406 VKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSAS 465
Query: 266 QVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
VF K + V W MI G A+HG EA+++F +M+ +V PN++TFIA+L+AC H
Sbjct: 466 SVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHG 525
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
+V+ G+ YF +M S YGI P+IE YGCM+DLL R+G+L+++E+++ MP + AIWG+
Sbjct: 526 YMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGA 585
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR-KVMRDMG 443
LL A IY D+E G + + +++P++ G +L NIY+ GRWNE+ +R K +
Sbjct: 586 LLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSD 645
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
KK+PG S IE++ HEF+ GD SHP +Y L ++ ++K A ++
Sbjct: 646 RKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYV 694
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 140/353 (39%), Gaps = 91/353 (25%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP------- 57
GLD N +++ I G + A ++F D Y +NT I A + N
Sbjct: 308 GLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELF 367
Query: 58 ------------------------LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE 93
+ A+ ++K+ S ++P+ Y+ L A L ++
Sbjct: 368 DEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALD 427
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE--LSLRVWNVAVWNTMV 151
G+ IH + + ++A+LI MYA C I A VF E + +VW WN M+
Sbjct: 428 QGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWP---WNAMI 484
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G+A G +P EAI +F +M+VE V P+++
Sbjct: 485 GGFAMHG-------------------------------KPEEAINVFEKMKVEKVSPNKV 513
Query: 212 AMLAALSACAQLGAVELGEWIHNYIE----QYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+A L+AC+ V+ G+ +Y E YG+N + ++D+ ++SG + + ++
Sbjct: 514 TFIALLNACSHGYMVKEGK---SYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEM 570
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA--------RVKPNEI 312
+M M +A+ G A ++ MER + PN I
Sbjct: 571 ILSM---------PMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHI 614
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 273/479 (56%), Gaps = 3/479 (0%)
Query: 2 IVRGLDQNNHLLS-RFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+ GL N +S + S + G A +F PD+ + + + + D+ A
Sbjct: 44 LTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKA 103
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +++ AS RPD ++ L A L +G +H GLDS++ V AL+ M
Sbjct: 104 ISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDM 163
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C AR VFD + ++ + W +M+ GY K +++A + F M K+ +SWT
Sbjct: 164 YCRCGKFEPARTVFDRMLVK--DEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTA 221
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI G+ Q QP +A+ LF +M +E +P+ I ++ LSACA +GA++LG IH Y +
Sbjct: 222 LITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSN 281
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
T + + NAL+DMYAKSG I A VFE ++ K TWTTMI+ + G GR+A+++F
Sbjct: 282 ATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFW 341
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M R+ + PN +TF+++LSAC H GL++ GR F+ M+ Y I+P++E YGCM+DLLGR
Sbjct: 342 DMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRG 401
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L+EAE L+ M E + IW SLL+A +G+ L E A + +IK EP + G Y +L
Sbjct: 402 GLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGKEIIKREPGDDGVYVLLW 461
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
N+YA+ RW E+ +RK M + K PGCS+IEV VHEF+ D SH +Y L
Sbjct: 462 NMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDKSHDARREIYVTL 520
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 280/458 (61%), Gaps = 5/458 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+ V G ++ + ++ I C SS FS +AY +F +++NT I+A + + P
Sbjct: 33 LTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIWNTVIRAFAEKNEP 92
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A++L+ + S P+NY++ F+ KA L+ + LG HCQ++ G + V L
Sbjct: 93 RKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYLGLACHCQSIKLGWEFYDFVQNGL 152
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ M+A C+ ARK+FD S R +V W ++ GY + G + R LF+ M E+N +S
Sbjct: 153 VHMFAIFGCMDSARKLFDLSSNR--DVITWTALINGYVRAGQVLIGRELFDKMPERNSVS 210
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+ +I GY ++ EA+ LF M + P+ ++ A++ACA LGA++ G WIH YI+
Sbjct: 211 WSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWIHCYIK 270
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ ++ + ALIDMYAK G I A +F ++N+ V +T +I+GLA HG A++
Sbjct: 271 RNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATAVE 330
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F RM V PNE+TF+++L+AC +GLV+ G R F M YG EP+++ YGC++DLL
Sbjct: 331 LFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLL 390
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L+EA+KL++ MP + ++ + G+LL AS +YGDVELGE ++ L +L +SG +
Sbjct: 391 GRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLAQLSLDHSGVHV 450
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
+LSN+YA +W+E ++R+ M D V+K+PGCS I+V
Sbjct: 451 VLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLIKV 488
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/472 (37%), Positives = 280/472 (59%), Gaps = 10/472 (2%)
Query: 24 GFSDYAYSIFTHKS----KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
G D A +F+ +P++ +N I + AV+++ + PD +
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTI 253
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
VL AV L + +G IH + GL SD V +ALI MY C C + +VFD++
Sbjct: 254 SSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDH 313
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAI 195
+V N + G ++ G + ++ LF + ++ NV+SWT++IA +Q + EA+
Sbjct: 314 --MDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEAL 371
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LFR MQ+ VKP+ + + L AC + A+ G+ H + + G++T V + +ALIDMY
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G+I + F+ + K+++ W +IAG A+HG +EA+++F M+R+ KP+ I+F
Sbjct: 432 AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+LSAC GL E G YFN M S+YGIE ++E Y CM+ LL RAG L++A ++RRMP
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+A +WG+LL++ ++ +V LGE A + L +LEP N GNY +LSNIYA G WNE ++
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRV 611
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
R +M++ G++K PGCS+IEV +VH +AGD SHP ++ + L K++ +MK
Sbjct: 612 RDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMK 663
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 214/432 (49%), Gaps = 45/432 (10%)
Query: 5 GLDQNNHLLSRFIDS-CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
GL + HL ++ + +++ F+D A + +P+V+ ++T I A + +A+
Sbjct: 43 GLFNDTHLATKLLSHYANNMCFAD-ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALST 101
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++++ L PDN P +KA LS ++ R++H +G DSD V ++L+ MY
Sbjct: 102 FSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIK 161
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVISWT 179
C I DA +VFD + +V W+ +VA YA+ G ++ A+ LF M + N+ISW
Sbjct: 162 CNQIRDAHRVFDRMFEP--DVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWN 219
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+IAG+ +EA+ +F M + +PD + + L A L + +G IH Y+ +
Sbjct: 220 GMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQ 279
Query: 240 GLNTIVPLNNALIDMYAK-------------------------------SGKIGKALQVF 268
GL + +++ALIDMY K +G++ +L++F
Sbjct: 280 GLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLF 339
Query: 269 ENMKNK----SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+K++ +V++WT+MIA + +G EAL++F M+ A VKPN +T +L AC ++
Sbjct: 340 RQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNI 399
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
+ G+ + R GI + +ID+ + G +Q + +P + N W +
Sbjct: 400 AALMHGKAA-HCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNA 457
Query: 385 LLAASNIYGDVE 396
++A ++G +
Sbjct: 458 VIAGYAMHGKAK 469
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 286/524 (54%), Gaps = 39/524 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ L N+ L + + + +SL A +F + +V + N I++
Sbjct: 65 IILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEG 124
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V ++ + +RPD+Y+FP VLKA TI +GR+IH GL S + V L+ M
Sbjct: 125 VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSM 184
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA----------------- 163
Y C + +AR V DE+S R +V WN++V GYA+ ++A
Sbjct: 185 YGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242
Query: 164 --------------------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ +F M +K+++SW +I Y + P EA+ L+ RM+
Sbjct: 243 TMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA 302
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ +PD +++ + L AC A+ LG+ IH YIE+ L + L NALIDMYAK G + K
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VFENMK++ V++WT MI+ G G +A+ +FS+++ + + P+ I F+ L+AC H
Sbjct: 363 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL+E GR F +M Y I P++E CM+DLLGRAG ++EA + ++ M E N +WG
Sbjct: 423 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWG 482
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A ++ D ++G A L +L P SG Y +LSNIYA GRW E IR +M+ G
Sbjct: 483 ALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 542
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+KK PG S +EV++ +H F+ GD SHP D +Y+ L + +MK
Sbjct: 543 LKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 39/307 (12%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + + L + + L++ YAS K + ARKVFDE+ R NV + N M+ Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER--NVIIINVMIRSY- 115
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+NN G+ E + +F M NV+PD
Sbjct: 116 ----VNN---------------------GFY-----GEGVKVFGTMCGCNVRPDHYTFPC 145
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L AC+ G + +G IH + GL++ + + N L+ MY K G + +A V + M +
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V++W +++ G A + +AL++ ME ++ + T ++L A + + Y
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--MYVK 263
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIY 392
M + G + + + MI + + EA +L RM FE +A S+L A
Sbjct: 264 DMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 393 GDVELGE 399
+ LG+
Sbjct: 323 SALSLGK 329
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 21/235 (8%)
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
++DQ + T+F QV + PD + +H+ I L
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPD----------------IRTLRTVHSRIILEDLRCNSS 75
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L L+ YA + A +VF+ + ++VI MI +G E + +F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V+P+ TF +L AC G + +GR+ ++ G+ + ++ + G+ G+L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 367 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+L M + W SL+ A N D L C +K+ H++G A L
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS-HDAGTMASL 247
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 263/461 (57%), Gaps = 35/461 (7%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+S G+ + A ++F DV +N I +T N A+ L+ ++ + +RPD +
Sbjct: 140 ASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMV 199
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
V+ A + +IELGR++H G S++ +V ALI Y+ C + A +F LS +
Sbjct: 200 TVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYK 259
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V WN ++ GY ++ EA+ LF+
Sbjct: 260 --DVISWNILIG-------------------------------GYTHLNLYKEALLLFQE 286
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKS 258
M P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LIDMY+K
Sbjct: 287 MLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKC 346
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G I A QVF +M +KS+ W MI G A+HG A D+FSRM + +KP++ITF+ +L
Sbjct: 347 GDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLL 406
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
SAC H G+++LGR F M Y I PK+E YGCMIDLLG +G +EAE+++ M E +
Sbjct: 407 SACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPD 466
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
IW SLL A ++G+VELGE Q+L K+EP+N G+Y +LSNIYA GRWNE +IR +
Sbjct: 467 GVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGL 526
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ D G+KK+PGCS IE+ VHEF+ GD HP +Y +L
Sbjct: 527 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 567
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 211/367 (57%), Gaps = 4/367 (1%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA S+F +P++ ++NT + + +P++A+ LY + + L P++Y+FPF+LK+
Sbjct: 15 YAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 74
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
KL + G +IH + G + D++V +LI MY + + DA KVFD S R +V +
Sbjct: 75 KLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHR--DVVSY 132
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+V GYA G + +AR +F+ + K+V+SW +I+GY + EA+ LF+ M NV+
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PDE M+ +SA A+ G++ELG +H++I +G + + + NALID Y+K G++ A +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F + K VI+W +I G L +EAL +F M R+ PN++T ++IL AC H+G +
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 328 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++GR + I K G+ +ID+ + G ++ A ++ M ++ A W +++
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPA-WNAMI 371
Query: 387 AASNIYG 393
++G
Sbjct: 372 FGFAMHG 378
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 294/488 (60%), Gaps = 9/488 (1%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL + SR + C+S +YAY +FT + + +++NT I+ ++ P
Sbjct: 48 LIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEM 107
Query: 60 AVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ ++ + S+ ++P ++P V KA +L GR++H + GL+ D + +
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ MY +C C+ +A ++F L + ++V WN+M+ G+AK G ++ A+ LF+ M ++N +S
Sbjct: 168 LHMYVTCGCLIEAWRIF--LGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVS 225
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI- 236
W ++I+G+ + + +A+ +FR MQ ++VKPD M++ L+ACA LGA E G WIH YI
Sbjct: 226 WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 237 -EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ LN+IV ALIDMY K G I + L VFE K + W +MI GLA +G A
Sbjct: 286 RNRFELNSIVV--TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+D+FS +ER+ ++P+ ++FI +L+AC H G V +F +MK +Y IEP I+ Y M++
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+LG AG L+EAE L++ MP E + IW SLL+A G+VE+ + A + L KL+P +
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCG 463
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN YA G + E+ + R +M++ ++K GCS IEV VHEF++ +HP +
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEI 523
Query: 476 YQILCKIN 483
Y +L +N
Sbjct: 524 YSLLDILN 531
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 69/334 (20%)
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ ST+ ++IH + TGL SD V A+ + +
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDT-VTASRVLAFCC----------------------- 68
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVE 204
A D+N A +F + KN W T+I G+++ P AI++F M
Sbjct: 69 --------ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSP 120
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY--------- 255
+VKP + + A +LG G +H + + GL + N ++ MY
Sbjct: 121 SVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180
Query: 256 ----------------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
AK G I +A +F+ M ++ ++W +MI+G +G +
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGC 352
+ALDMF M+ VKP+ T +++L+AC ++G E GR I+++R+ + +
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV--VTA 298
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ID+ + G ++E + P + + W S++
Sbjct: 299 LIDMYCKCGCIEEGLNVFECAP-KKQLSCWNSMI 331
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 274/472 (58%), Gaps = 33/472 (6%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G YA+ IF+ P+++++NT I+ +D+P++A+ LY + + P++Y+F
Sbjct: 12 SPHGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFG 71
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FVL A KL + G+E+H Q V GLD + ++ LI++YA+C C
Sbjct: 72 FVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGC-------------- 117
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ A +F+ M E + SW+T+++GY+Q Q E + L R
Sbjct: 118 -------------------MDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLRE 158
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
MQ ENV D + + + C LG ++LG+W+H+YI++ G+ V L AL+ MY+K G
Sbjct: 159 MQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGS 218
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ AL+VF+ M + V TW+ MIAG A+HG +AL +F M+R+++ PN +TF ++LSA
Sbjct: 219 LDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSA 278
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
H GLVE G + F M + Y I P+I+ YGCM+DL RAG + A K ++ MP E N
Sbjct: 279 YSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVV 338
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+W +LL A +G LGE + ++KL+P + NY +SN+YA LGRW+ ++R +M+
Sbjct: 339 LWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMK 398
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
+ KK G S IE++ VH+F+ G+ SHP +++Y +L ++ ++K H+
Sbjct: 399 EKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHV 450
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 126/292 (43%), Gaps = 35/292 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ GLD LL+ I ++ G DYA +F +PD ++T + Q +
Sbjct: 93 IVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVET 152
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L ++QA + D ++ V+ L ++LG+ +H G+ DV + AL+ M
Sbjct: 153 LKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGM 212
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + +A KVF ++ R +V W+ M+AGYA G A LF+ M +I
Sbjct: 213 YSKCGSLDNALKVFQGMAER--DVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKII---- 266
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQY 239
P+ + + LSA + G VE G I + +Y
Sbjct: 267 ---------------------------PNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEY 299
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ + ++D++ ++G +G A + + M +V+ W T++ HG
Sbjct: 300 KITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHG 351
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/480 (38%), Positives = 265/480 (55%), Gaps = 36/480 (7%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
+ I +S GF D A +F DV +N I Q+ A+ + +++ + +
Sbjct: 197 FTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKV 256
Query: 73 RPDNYSFPFVLKAVVKL-STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
P+ + VL A + S+++LG + GL S++ +V LI MY C
Sbjct: 257 TPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC------- 309
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
GDL A LFE + +KNV+SW +I GY M
Sbjct: 310 --------------------------GDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCY 343
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLNN 249
EA+ LFRRM N+ P+++ L+ L ACA LGA++LG+W+H Y+++ + V L
Sbjct: 344 KEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWT 403
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+LIDMYAK G + A ++F+ M KS+ TW MI+G A+HG AL +FSRM P
Sbjct: 404 SLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVP 463
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++ITF+ +L+AC H GL+ LGRRYF+ M Y + PK+ YGCMIDL GRAG EAE L
Sbjct: 464 DDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETL 523
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
++ M + + AIW SLL A I+ +EL E +HL +LEP N Y +LSNIYA GRW
Sbjct: 524 VKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRW 583
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+ KIR + D +KK+PGCS IEV VHEF+ GD HP + +Y++L +I+ +++ A
Sbjct: 584 EDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKA 643
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 231/404 (57%), Gaps = 9/404 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL + LS+ I+ C S G YA S+F P+ ++N I+ L +++P
Sbjct: 51 IIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPF 110
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ Y + +S P+ Y+FP + K+ K+ G+++H + GL+ + V +LI
Sbjct: 111 LALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLI 170
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA + +AR VFD+ S+R + + ++ GYA G L+ AR LF+ + ++V+SW
Sbjct: 171 NMYAQNGELVNARLVFDKSSMR--DAVSFTALITGYASKGFLDEARELFDEIPVRDVVSW 228
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA-VELGEWIHNYIE 237
+I+GYAQ + EA+ F M+ V P+ ML+ LSACAQ G+ ++LG W+ ++IE
Sbjct: 229 NAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIE 288
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
GL + + L N LIDMY K G + +A +FE +++K+V++W MI G +EAL
Sbjct: 289 DRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALG 348
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDL 356
+F RM ++ + PN++TF++IL AC ++G ++LG+ + + K+ ++ + + +ID+
Sbjct: 349 LFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDM 408
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG--DVELG 398
+ G L A+++ M ++ A W ++++ ++G D LG
Sbjct: 409 YAKCGDLAVAKRIFDCMNTKS-LATWNAMISGFAMHGHTDTALG 451
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 65/330 (19%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
T++ ++IH Q + TGL + ++ LI+ A
Sbjct: 40 TLQTLKQIHSQIIKTGLHNTHFALSKLIEFCA---------------------------- 71
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+ GDL+ A +LF+ + N + W +I G + + P A+ + M +P+E
Sbjct: 72 ---VSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNE 128
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK---------- 260
+ +C ++ G+ +H ++ + GL ++ +LI+MYA++G+
Sbjct: 129 YTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDK 188
Query: 261 ---------------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ +A ++F+ + + V++W MI+G A G EA+ F
Sbjct: 189 SSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFF 248
Query: 300 SRMERARVKPNEITFIAILSACCHVG-LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
M RA+V PN T +++LSAC G ++LG + ++ R G+ I +ID+
Sbjct: 249 EEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR-GLGSNIRLVNGLIDMYV 307
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ G L+EA L ++ + N W ++
Sbjct: 308 KCGDLEEASNLFEKIQ-DKNVVSWNVMIGG 336
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/487 (37%), Positives = 282/487 (57%), Gaps = 3/487 (0%)
Query: 2 IVRGLDQNNHLLSRFIDSC-SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
I GL + +S I C + G A +F PD+ + + + Q DN A
Sbjct: 38 IAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLISFTSLMSLHLQLDNQREA 97
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ ++ A+ RPD ++ L A +GR +H GLD +V V ALI M
Sbjct: 98 ISLFARVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGLDGEVVVGNALIDM 157
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C A KVFD +SL+ + W +M+ GY K +++A + F+ + ++V++WT
Sbjct: 158 YSQCGKFESAVKVFDRMSLK--DEVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTA 215
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI G+ Q QP A+ LF RM +E +P + ++ LSACA +GA++LG IH Y +
Sbjct: 216 LITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDLGRVIHGYGSKCN 275
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + ++NAL+DMYAKSG I A VF+ +++K TWTTMI+ + G G++AL++F
Sbjct: 276 ASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMISCCTVQGDGKKALELFQ 335
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M RA V PN +TF+++LSAC H GL+E G F+ M+ Y I+P +E YGCMIDLLGR
Sbjct: 336 DMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYKIDPLLEHYGCMIDLLGRG 395
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L+EAE L+ M E + IW SLL+A + G+ L E A + ++K EP + G Y +L
Sbjct: 396 GLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLAEIAGKEIVKREPGDDGVYVLLW 455
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N+YA +W E+ ++R+ M + + K PGCS+IE+ VHEF+ D +H +Y+ L
Sbjct: 456 NMYASSNKWREAREMRQQMLSLKIFKKPGCSWIEIDGAVHEFLVEDKTHDARREIYETLE 515
Query: 481 KINGQMK 487
++ Q+K
Sbjct: 516 YMSRQLK 522
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/537 (37%), Positives = 306/537 (56%), Gaps = 34/537 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I+ GL L + I C+ G YA +F +P+ ++YN+ I+ +D+P+
Sbjct: 11 IILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPI 70
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+AV+L+ ++ S L P+ ++ PFVLKA S +H + G+ S V V ALI
Sbjct: 71 DAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALI 130
Query: 119 QMYASCKCIYDARKVFDELSLRVW-NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+Y C I+ ARK+FD+++ + ++ V N +V YAK G+L++A+A+F+ EKNV+S
Sbjct: 131 AVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVS 190
Query: 178 WTTLIAGYAQMD-------------------------------QPNEAITLFRRMQVENV 206
WT++I+ YAQ Q EA+ LF +M+ V
Sbjct: 191 WTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRV 250
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
PDE +++ L+AC+QLG + +G+ IHNYI V L N+LIDMYAK G + AL
Sbjct: 251 VPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALD 310
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F M K++++W +I LALHG G EA+ +F M+ P+EIT +LSAC H GL
Sbjct: 311 IFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGL 370
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V++G YF+ M Y + +IE Y CM+DLLGR G L EA +L+ RMP + + +WG+LL
Sbjct: 371 VDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALL 430
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A I+G+VE+G+ L+ L++LEPH+ G Y ++SNIY RW + KIRK+M D G+KK
Sbjct: 431 GACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKK 490
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
S IE+ ++EF+ D H +Y +L ++ ++ A +L N S E++
Sbjct: 491 GRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYLCNISSVFFEAE 547
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 286/524 (54%), Gaps = 39/524 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ L N+ L + + + +SL A +F + +V + N I++
Sbjct: 65 IILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEG 124
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V ++ + +RPD+Y+FP VLKA TI +GR+IH GL S + V L+ M
Sbjct: 125 VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSM 184
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA----------------- 163
Y C + +AR V DE+S R +V WN++V GYA+ ++A
Sbjct: 185 YGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242
Query: 164 --------------------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ +F M +K+++SW +I Y + P EA+ L+ RM+
Sbjct: 243 TMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA 302
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ +PD +++ + L AC A+ LG+ IH YIE+ L + L NALIDMYAK G + K
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VFENMK++ V++WT MI+ G G +A+ +FS+++ + + P+ I F+ L+AC H
Sbjct: 363 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL+E GR F +M Y I P++E CM+DLLGRAG ++EA + ++ M E N +WG
Sbjct: 423 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWG 482
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A ++ D ++G A L +L P SG Y +LSNIYA GRW E IR +M+ G
Sbjct: 483 ALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 542
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+KK PG S +EV++ +H F+ GD SHP D +Y+ L + +MK
Sbjct: 543 LKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 39/307 (12%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + + L + + L++ YAS K + ARKVFDE+ R NV + N M+ Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER--NVIIINVMIRSY- 115
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+NN G+ E + +F M NV+PD
Sbjct: 116 ----VNN---------------------GFY-----GEGVKVFGTMCGCNVRPDHYTFPC 145
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L AC+ G + +G IH + GL++ + + N L+ MY K G + +A V + M +
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V++W +++ G A + +AL++ ME ++ + T ++L A + + Y
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--MYVK 263
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIY 392
M + G + + + MI + + EA +L RM FE +A S+L A
Sbjct: 264 DMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 393 GDVELGE 399
+ LG+
Sbjct: 323 SALSLGK 329
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 21/235 (8%)
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
++DQ + T+F QV + PD + +H+ I L
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPD----------------IRTLRTVHSRIILEDLRCNSS 75
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L L+ YA + A +VF+ + ++VI MI +G E + +F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V+P+ TF +L AC G + +GR+ ++ G+ + ++ + G+ G+L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 367 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+L M + W SL+ A N D L C +K+ H++G A L
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS-HDAGTMASL 247
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 290/515 (56%), Gaps = 62/515 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I RGL+Q++ L+ FI +L + YA S+F P L+NT IK+ CQ + +
Sbjct: 52 IIHRGLEQDHFLVFLFISRAHTLLSTLSYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSH 111
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ + +++A PD++++P V+KA G+ +H G+D D++V +LI
Sbjct: 112 TLSAFARMKAHGALPDSFTYPSVIKACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLID 171
Query: 120 MYASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTM 150
MY C I DARKVFD +S R W NVA WN+M
Sbjct: 172 MYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRNVASWNSM 231
Query: 151 VAGYAKVGDLNNARALFELMTEKNVIS-------------------------------WT 179
+ G+ K+GDL+ AR +F+ M EKNV+S W+
Sbjct: 232 LQGFVKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWS 291
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI+GY Q PN+A+ +F M++ NVKPDE +++ +SA AQLG +EL +W+ +Y+ +
Sbjct: 292 ALISGYVQNGLPNQALRVFLEMELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKI 351
Query: 240 GLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
++ + AL+DM AK G + +AL++F+ + V+ + +MI GL++HG G EA+++
Sbjct: 352 CIDLQQDHVIAALLDMNAKCGNMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNL 411
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F+RM + P+E+ F IL+AC GLV+ GR YF MK +Y I P + Y CM+DLL
Sbjct: 412 FNRMLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLS 471
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R+G++++A +L++ +P+E +A WG+LL A +YGD ELGE L +LEP N+ NY +
Sbjct: 472 RSGHIRDAYELIKLIPWEPHAGAWGALLGACKLYGDSELGEIVANRLFELEPLNAANYVL 531
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
LS+IYA RW + +R MR+ V+K+PG S I
Sbjct: 532 LSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 293/524 (55%), Gaps = 37/524 (7%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I+ LD +N L S I+ S +G + A +F+ + DV +N I + Q A+
Sbjct: 310 ILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKAL 369
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ + +++ LR D+ + +L A S I+LG+E HC + L+SDV V ++I MY
Sbjct: 370 NMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMY 429
Query: 122 ASCKCIYDARKVFD---ELSLRVWN------------------------------VAVWN 148
A C+ I DARKVFD E L +WN V WN
Sbjct: 430 AKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWN 489
Query: 149 TMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+++ G+ + G +N A+ +F M + N+I+WTTLI+G AQ EAI F++MQ
Sbjct: 490 SVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEA 549
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
++P ++ + L AC + ++ G IH +I ++ VP+ +L+DMYAK G I +A
Sbjct: 550 GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEA 609
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+VF M +K + + MI+ ALHG EAL +F +++ ++P+ ITF +ILSAC H
Sbjct: 610 KKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHA 669
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV G F M S++ + P +E YGC++ LL R G L EA +L+ MPF+ +A I GS
Sbjct: 670 GLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGS 729
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A + ++ELGE +HL KLEP NSGNY LSN YA GRW E +R +M+ G+
Sbjct: 730 LLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGL 789
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+K PGCS+I+ +++ FVAGD SHP + +Y +L + +M+F
Sbjct: 790 RKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRF 833
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 204/444 (45%), Gaps = 46/444 (10%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N ++ ++ + + F + A +F +V+ + + C+ +A++ + ++
Sbjct: 114 KNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEM 173
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
Q + + PDN+ P VLKA L I LG+ +H + G + V V ++L+ MY C +
Sbjct: 174 QENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVL 233
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
DARKVFD + + NV WN+M+ GY + G LN
Sbjct: 234 EDARKVFDSMVEK--NVVTWNSMIVGYVQNG-LN-------------------------- 264
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
EAI +F M+VE ++P + + + LSA A L A+ G+ H L+ L
Sbjct: 265 ----QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 320
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
+++I+ Y+K G I A VF M K V+TW +I+ H +AL+M M +
Sbjct: 321 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENL 380
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+ + +T +ILSA ++LG+ + R +E + +ID+ + + +A
Sbjct: 381 RFDSVTLSSILSASAVTSNIKLGKEG-HCYCIRRNLESDVVVANSIIDMYAKCERIDDAR 439
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE----PHN--SGNYAILSN 421
K+ E + +W +LLAA Y V L AL+ +++ P N S N IL
Sbjct: 440 KVFDSTT-ERDLVLWNTLLAA---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGF 495
Query: 422 IYAILGRWNESGKIRKVMRDMGVK 445
+ G+ NE+ + M+ +G +
Sbjct: 496 LRN--GQVNEAKDMFSQMQSLGFQ 517
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 283/485 (58%), Gaps = 54/485 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL--GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL + S+ + C+S G YA ++F +P+ +++NT I+ + P
Sbjct: 41 MLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPE 100
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++LY+ + ++ + Y+FPF+LKA +S +E ++IH + G S+++ +L+
Sbjct: 101 EALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLL 160
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y+ K GD+ +AR LF+
Sbjct: 161 NVYS---------------------------------KSGDIKSARLLFD---------- 177
Query: 179 TTLIAGYAQMDQPN-EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
Q+DQ + EA+ LF RMQ +K D +A+++ L ACA LG ++ G+WIH YI+
Sbjct: 178 --------QVDQRDTEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIK 229
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
++ + L LIDMYAK G + +A++VF M+ K V WT MI+G A+HG GREAL+
Sbjct: 230 KHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALE 289
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F +M+ A V+PN++TF IL+AC H GLV + F M+ +G +P IE YGCM+DLL
Sbjct: 290 WFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLL 349
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L+EAE+L+ MP + NAAIWG+LL A +I+G++ELG+ + LI+++P + G Y
Sbjct: 350 GRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYI 409
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
L++I+A G WN++ ++R+ M++ GV K+PGCS I V+ HEF+AGD SHP +
Sbjct: 410 HLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDH 469
Query: 478 ILCKI 482
+L +I
Sbjct: 470 MLEQI 474
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 276/474 (58%), Gaps = 11/474 (2%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D ++ P Y + I A L A+ L +++ L P +++ L A
Sbjct: 84 DLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC 143
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L+ LGR +H L D +V AL+ MYA AR +FDE+ +V
Sbjct: 144 HGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDP--HVVP 198
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
M+ YAK+G L++AR LF+ M K+ I W +I GY Q +PNEA+ LFR M V
Sbjct: 199 VTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGV 258
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIE---QYGLNTIVPLNNALIDMYAKSGKIGK 263
PDE+A++ ALSA AQLG E G W+H+Y++ + LN V ALIDMY K G +
Sbjct: 259 DPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV--GTALIDMYCKCGSLED 316
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A+ VF ++ +K ++ W MI G A+HG R+AL+MFS++ + P +ITFI +L+AC H
Sbjct: 317 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 376
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G ++F M+ Y I PKIE YGCM+DLLGRAG ++EA L++ M + +W
Sbjct: 377 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 436
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
SLLAA ++ ++ LG+ +L+ NSG Y +LSNIYA +G W E ++R +M+ G
Sbjct: 437 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 496
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL-QNEF 496
++K PGCS IEV ++V+EFVAGD SHP D +Y +L K+NG +K H+ Q E
Sbjct: 497 IQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTEL 550
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 276/474 (58%), Gaps = 11/474 (2%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D ++ P Y + I A L A+ L +++ L P +++ L A
Sbjct: 83 DLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC 142
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L+ LGR +H L D +V AL+ MYA AR +FDE+ +V
Sbjct: 143 HGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDP--HVVP 197
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
M+ YAK+G L++AR LF+ M K+ I W +I GY Q +PNEA+ LFR M V
Sbjct: 198 VTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGV 257
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIE---QYGLNTIVPLNNALIDMYAKSGKIGK 263
PDE+A++ ALSA AQLG E G W+H+Y++ + LN V ALIDMY K G +
Sbjct: 258 DPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV--GTALIDMYCKCGSLED 315
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A+ VF ++ +K ++ W MI G A+HG R+AL+MFS++ + P +ITFI +L+AC H
Sbjct: 316 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 375
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G ++F M+ Y I PKIE YGCM+DLLGRAG ++EA L++ M + +W
Sbjct: 376 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 435
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
SLLAA ++ ++ LG+ +L+ NSG Y +LSNIYA +G W E ++R +M+ G
Sbjct: 436 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 495
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL-QNEF 496
++K PGCS IEV ++V+EFVAGD SHP D +Y +L K+NG +K H+ Q E
Sbjct: 496 IQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTEL 549
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/551 (35%), Positives = 297/551 (53%), Gaps = 65/551 (11%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKS-KPDVYLYNTTIKALCQTDNPL 58
+I+R +D N ++L++FI +C L + +A +F ++S + D +L N+ IK+
Sbjct: 24 LILRNAIDANVNILTKFITTCGQLSSTRHARHLFDNRSHRGDTFLCNSMIKSHVVMRQLA 83
Query: 59 NAVILYNKIQ-ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+A LY ++ + PDN++F + K + G E H V G D++V AL
Sbjct: 84 DAFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAVWEGLETHGHVVKIGFCFDMYVSTAL 143
Query: 118 IQMYASCKCIYDARKVFDEL---SLRVWNV--------------------------AVWN 148
+ MYA + ARKVF+++ SL W A +N
Sbjct: 144 VDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLFKLMPGRDSAAFN 203
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTT---------------------------- 180
++ GY KVGD+ +AR+LF+ M E+NVISWT+
Sbjct: 204 LLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVS 263
Query: 181 ---LIAGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+I GY Q QP+EA+ LFR +Q V +P+E+ +++ L A A LGA+ELGEW+H ++
Sbjct: 264 WNAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHRFV 323
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
++ L+ V + +L+DMY K G+I KA +VF + K TW +I G A++GL EAL
Sbjct: 324 QRKKLDAAVNVCTSLVDMYLKCGEISKARKVFSEIPKKETATWNALINGFAMNGLASEAL 383
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+ FS M++ +KPN+IT +LSAC H GLVE G+ F M G+ PKIE YGC++DL
Sbjct: 384 EAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKGQFKAMIES-GLSPKIEHYGCLVDL 442
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG L EAE L++ MPFEAN I S A DV + L + +EP N+G Y
Sbjct: 443 LGRAGCLDEAENLIKSMPFEANGIILSSFSFACGFSNDVTRAQRVLNQAVNMEPGNNGIY 502
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
++ N+YA+ RW + +I +MR G KK G S IEV RV EF++G +HP D +
Sbjct: 503 VMMRNLYAMEERWKDVKEINGLMRRRGAKKEVGSSAIEVDSRVSEFISGGIAHPQLDVIE 562
Query: 477 QILCKINGQMK 487
++ ++ M+
Sbjct: 563 SVIGQLWIHMR 573
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 205/551 (37%), Positives = 298/551 (54%), Gaps = 84/551 (15%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYA-YSIFTHKSKP---DVYLYNTTIKALCQTDNPLNAV 61
L +N LLS + S ++ FS+ A Y I P + +LYNT I+ + D NAV
Sbjct: 32 LHHDNDLLSIILRS--TINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAV 89
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY + +A+ PD+++F FVLKA +L+ LG IH TG D DV V ++ Y
Sbjct: 90 HLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFY 149
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAG---------------------------- 153
+ C + DA KVFD++ ++ NV W M+ G
Sbjct: 150 SKCGFLRDAWKVFDDMVVK--NVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFV 207
Query: 154 -------YAKVGDLNNARALFELMTE----KNVISWTTLIAGYAQ---MDQ--------- 190
A++GDL + R + M E +NV T+L+ Y + M++
Sbjct: 208 IVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMV 267
Query: 191 -------------------PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
P EAI LF M+ NV+PD AM+ ALS+CA LGA+ELG W
Sbjct: 268 EKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNW 327
Query: 232 ---IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
+ NY E++ N + L +LID YAK G + +AL V++ MK K + + +I+GLA+
Sbjct: 328 AKGLMNY-EEFLSNPV--LGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAM 384
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+G A +F +M + + PNE TF+ +L C H GLV+ GR YFN M + + P IE
Sbjct: 385 YGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIE 444
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
YGCM+DLL RAG+L EA L++ MP +AN +WGSLL ++ + +L E L+ LI+L
Sbjct: 445 HYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIEL 504
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
EP NSG+Y +LSNIY+ RW+E+ KIR + + G++K+PG S++EV VHEF+ GDTS
Sbjct: 505 EPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTS 564
Query: 469 HPDFDRLYQIL 479
HP ++Y+ L
Sbjct: 565 HPLSQKIYEKL 575
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 275/463 (59%), Gaps = 37/463 (7%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G +YA +FT PD ++ NT I+ ++ NP AV LY + + DNY++P
Sbjct: 56 SHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYP 115
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FVL A +L ++LGR HC+ + G SD+ V+ ALIQ Y +C
Sbjct: 116 FVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNC---------------- 159
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
G A +F+ T ++V++W +I + +A L
Sbjct: 160 -----------------GSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202
Query: 201 M-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNY---IEQYGLNTIVPLNNALIDMYA 256
M +++N++PDE+ M++ + ACAQLG +E G+++H+Y ++++ +N + L AL+DMYA
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYA 262
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G I ALQVF M+ ++V TW +I GLA+HG G +A+ +F +ME ++ P+++TFIA
Sbjct: 263 KCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIA 322
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L AC H GLV+ G F MK+++ IEP++E YGC++DLL RA + +A + MP +
Sbjct: 323 LLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIK 382
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
AN+ +W +LL A G +L E + +I+LEP + G Y +LSN+YA + +W+ + K+R
Sbjct: 383 ANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLR 442
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K M++ G++K PGCS+IE++ +H+FVAGD SH +++Y ++
Sbjct: 443 KQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMI 485
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/489 (37%), Positives = 289/489 (59%), Gaps = 24/489 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN- 59
M+ GL + LS +++ S S YA++IF H P ++LYNT I +L + ++
Sbjct: 28 MLTTGLSFQTYYLSHLLNTSSKFA-STYAFTIFNHIPNPTLFLYNTLISSLTHHSDQIHL 86
Query: 60 AVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG-TGLDSDVHVVAAL 117
A LYN I L+P++++FP + KA ++ G +H + D V +L
Sbjct: 87 AFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSL 146
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ YA + +R +FD++S ++A WNTM+A YA+ + +S
Sbjct: 147 LNFYAKYGKLCVSRYLFDQISEP--DLATWNTMLAAYAQ---------------SASHVS 189
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
++T + D EA+ LF MQ+ +KP+E+ ++A +SAC+ LGA+ G W H Y+
Sbjct: 190 YST---SFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVL 246
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ L + AL+DMY+K G + A Q+F+ + ++ + MI G A+HG G +AL+
Sbjct: 247 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALE 306
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
++ M+ + P+ T + + AC H GLVE G F MK +G+EPK+E YGC+IDLL
Sbjct: 307 LYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLL 366
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L+EAE+ L+ MP + NA +W SLL A+ ++G++E+GE AL+HLI+LEP SGNY
Sbjct: 367 GRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYV 426
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSN+YA +GRWN+ ++R +M+D GV K+PG S +E++ +HEF+ GD +HP +Y
Sbjct: 427 LLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYS 486
Query: 478 ILCKINGQM 486
+ +IN ++
Sbjct: 487 KIGEINRRL 495
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 50/265 (18%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L+ + K + +++H Q + TGL + ++ L+ + Y
Sbjct: 8 ILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTY------------- 54
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRR 200
A +F + + + TLI+ DQ + A +L+
Sbjct: 55 ---------------------AFTIFNHIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNH 93
Query: 201 MQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL-NNALIDMYAKS 258
+ + ++P+ + ACA ++ G +H ++ ++ P N+L++ YAK
Sbjct: 94 ILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKY 153
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------LGREALDMFSRMERA 305
GK+ + +F+ + + TW TM+A A + EAL +F M+ +
Sbjct: 154 GKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLS 213
Query: 306 RVKPNEITFIAILSACCHVGLVELG 330
++KPNE+T +A++SAC ++G + G
Sbjct: 214 QIKPNEVTLVALISACSNLGALSQG 238
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 291/484 (60%), Gaps = 8/484 (1%)
Query: 1 MIVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL + +S+ + + SS G DYAY + S P Y +N I+ + NP
Sbjct: 31 LITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPE 90
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ +Y ++ L PD+ ++PF++K+ +LS +LG +HC V +GL+ D+ + LI
Sbjct: 91 KSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLI 150
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY S + ARK+FDE+ + N+ WN+++ YAK GD+ +AR +F+ M+E++V++W
Sbjct: 151 HMYGSFRDQASARKLFDEMPHK--NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 179 TTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
+++I GY + + N+A+ +F +M ++ + K +E+ M++ + ACA LGA+ G+ +H YI
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVF--ENMKNKSVITWTTMIAGLALHGLGREA 295
L V L +LIDMYAK G IG A VF ++K + W +I GLA HG RE+
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F +M +++ P+EITF+ +L+AC H GLV+ +F +K G EPK E Y CM+D
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVD 387
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+L RAG +++A + MP + ++ G+LL +G++EL E + LI+L+PHN G
Sbjct: 388 VLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGR 447
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y L+N+YAI ++ + +R+ M GVKK+ G S +++ H F+A D +H D++
Sbjct: 448 YVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKI 507
Query: 476 YQIL 479
Y +L
Sbjct: 508 YAVL 511
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 262/421 (62%), Gaps = 5/421 (1%)
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
+ PD+ ++PF+ KA +L ELG IH + +G + D V +LI MY SC I A
Sbjct: 5 GIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYA 64
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
RKVFD ++ N+ WN+MV GYAK G L+ AR LF+LM E++V SW+ LI GYA+
Sbjct: 65 RKVFDGTPVK--NLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGN 122
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
+A+ +F +M+ K +E+ M++ L ACA LGA++ G +H Y+ G + L +
Sbjct: 123 YGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTS 182
Query: 251 LIDMYAKSGKIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
LIDMYAK G + +A VF +++ V+ W MI GLA HGL +E+LD+++ M+ A +K
Sbjct: 183 LIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGIK 242
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P+EITF+ +LSAC H GLV+ F + + G+ PK E Y CM+D++ RAG + EA +
Sbjct: 243 PDEITFLCLLSACAHGGLVKQASYVFEGL-GKNGMTPKTEHYACMVDVMARAGQVAEAYQ 301
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L +MP E A++ G+LL+ +G ++L E + LI+L+P + G Y LSN+YAI R
Sbjct: 302 FLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGRR 361
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
W+E+ +R+ M GVKK PG S++E+S H F+A D SHP +++Y +L I QM+F
Sbjct: 362 WDEARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFIVSQMQF 421
Query: 489 A 489
Sbjct: 422 G 422
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
+D + G+ D A +F + DV ++ I ++ N +A+ ++ K++ S + +
Sbjct: 83 VDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANE 142
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ VL A L ++ GR +H V G + ++ + +LI MYA C + +A VF
Sbjct: 143 VTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAFAVFRG 202
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+SLR +V +WN M+ G A G + E++
Sbjct: 203 VSLRKSDVLIWNAMIGGLATHGLV-------------------------------KESLD 231
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
L+ MQ+ +KPDEI L LSACA G V+ ++ + + G+ ++D+ A
Sbjct: 232 LYTEMQIAGIKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMA 291
Query: 257 KSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
++G++ +A Q M + +++G HG
Sbjct: 292 RAGQVAEAYQFLCQMPLEPTASMLGALLSGCMNHG 326
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 286/503 (56%), Gaps = 40/503 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV GL ++ LL++ I + G YA +F PD +L+++ +K + ++
Sbjct: 50 IIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDT 109
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V+ Y ++ S NY+F V+KA LS + LG+EIH + G SD++V AALI +
Sbjct: 110 VLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIAL 169
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA K D+ A+ +F+ M ++ +I+W +
Sbjct: 170 YA---------------------------------KASDMKVAKKVFDAMPQRTIIAWNS 196
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI+GY Q P E+I LF M +PD +++ LS+C+QLGA++ G W+H+Y + G
Sbjct: 197 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 256
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V L +LI+MY + G + KA +VF++MK ++V+TWT MI+G +HG GR+A+++F+
Sbjct: 257 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 316
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M +PN ITF+A+LSAC H GL++ GRR F+ MK YG+ P +E CM+D+ GRA
Sbjct: 317 EMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRA 376
Query: 361 GYLQEAEKLLRR-MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G L +A + +++ +P E A+W S+L A ++ + +LG +H++ +EP N G+Y +L
Sbjct: 377 GLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVML 436
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIYA+ GR + +R +M +KK G S IE++++ + F GD SHP + +Y+ L
Sbjct: 437 SNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYL 496
Query: 480 ------CKINGQMKFAEHLQNEF 496
C +G + E L ++
Sbjct: 497 DELMCRCSESGYVPAPESLMHDL 519
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+ +H +I GL+ L LI + +G I A ++F + N + +++ +
Sbjct: 44 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 103
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIE 348
G + + + RM + + TF +++ AC + + LG+ + ++M YG + ++
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 163
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+I L +A ++ A+K+ MP + W SL++ + G
Sbjct: 164 --AALIALYAKASDMKVAKKVFDAMP-QRTIIAWNSLISGYDQNG 205
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 286/503 (56%), Gaps = 40/503 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV GL ++ LL++ I + G YA +F PD +L+++ +K + ++
Sbjct: 114 IIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDT 173
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V+ Y ++ S NY+F V+KA LS + LG+EIH + G SD++V AALI +
Sbjct: 174 VLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIAL 233
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA K D+ A+ +F+ M ++ +I+W +
Sbjct: 234 YA---------------------------------KASDMKVAKKVFDAMPQRTIIAWNS 260
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI+GY Q P E+I LF M +PD +++ LS+C+QLGA++ G W+H+Y + G
Sbjct: 261 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 320
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V L +LI+MY + G + KA +VF++MK ++V+TWT MI+G +HG GR+A+++F+
Sbjct: 321 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 380
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M +PN ITF+A+LSAC H GL++ GRR F+ MK YG+ P +E CM+D+ GRA
Sbjct: 381 EMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRA 440
Query: 361 GYLQEAEKLLRR-MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G L +A + +++ +P E A+W S+L A ++ + +LG +H++ +EP N G+Y +L
Sbjct: 441 GLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVML 500
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIYA+ GR + +R +M +KK G S IE++++ + F GD SHP + +Y+ L
Sbjct: 501 SNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYL 560
Query: 480 ------CKINGQMKFAEHLQNEF 496
C +G + E L ++
Sbjct: 561 DELMCRCSESGYVPAPESLMHDL 583
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+ +H +I GL+ L LI + +G I A ++F + N + +++ +
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIE 348
G + + + RM + + TF +++ AC + + LG+ + ++M YG + ++
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+I L +A ++ A+K+ MP + W SL++ + G
Sbjct: 228 --AALIALYAKASDMKVAKKVFDAMP-QRTIIAWNSLISGYDQNG 269
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/407 (42%), Positives = 253/407 (62%), Gaps = 3/407 (0%)
Query: 82 VLKAVVKLSTIELGR-EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L ++ S LGR + G + V A+I +A + A+++FD + +
Sbjct: 63 ILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEK 122
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ M+ YAK G+L+ AR LF+ M E++ + W +I GY Q PNEA+ LFRR
Sbjct: 123 --SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 180
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M KP+E+ +L+ LSAC QLGA+E G W+H+YIE G+ V + AL+DMY+K G
Sbjct: 181 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 240
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ A VF+ + +K V+ W +MI G A+HG +EAL +F M R + P ITFI ILSA
Sbjct: 241 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA 300
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H G V G FN MK YGIEPKIE YGCM++LLGRAG++++A +L++ M E +
Sbjct: 301 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 360
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+WG+LL A ++G + LGE ++ L+ NSG Y +LSNIYA +G W+ ++R +M+
Sbjct: 361 LWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMK 420
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
D GVKK PGCS IEV+ +VHEF+AG +HP +Y +L +ING +K
Sbjct: 421 DSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 467
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 38/281 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + D +N I Q P A++L+ ++ + +P+ + VL
Sbjct: 138 GELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 197
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L +E GR +H G+ +VHV AL+ MY+ C + DAR VFD++ + +
Sbjct: 198 SACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK--D 255
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V WN+M+ GYA + G++Q EA+ LF+ M
Sbjct: 256 VVAWNSMIVGYA--------------------------MHGFSQ-----EALQLFKSMCR 284
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIG 262
+ P I + LSAC G V G I N + ++YG+ + ++++ ++G +
Sbjct: 285 MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVE 344
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMF 299
+A ++ +NM + W T++ LHG LG + +++
Sbjct: 345 QAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL 385
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + ++GL+ LN L YA G++ ++ +F +N SV WT +I G AL G
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
A +F M + ++ A+L+ G ++ R F+ M+ R G+ +
Sbjct: 109 VVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGV-----CWN 159
Query: 352 CMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELG 398
MID + G EA L RRM + N S+L+A G +E G
Sbjct: 160 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 209
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/486 (36%), Positives = 281/486 (57%), Gaps = 37/486 (7%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
+C L + + + H++K ++ + I + P A++LY K++ PD +
Sbjct: 126 ACGDLKSARFLFERMGHRNK---VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
++ A +L + +G ++H + + +AL+ MYA C
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC-------------- 228
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
GDL AR +F+ +++K+V +W+ LI GY + ++ EA+ LF
Sbjct: 229 -------------------GDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF 269
Query: 199 RRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
R + N++P+E+ +LA +SACAQLG +E G W+H+YI + V LNN+LIDM++K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G I A ++F++M K +I+W +M+ GLALHGLGREAL F M+ ++P+EITFI +
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGV 389
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
L+AC H GLV+ G++ F +++ YG+ K E YGCM+DLL RAG L EA + +R MP +
Sbjct: 390 LTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQP 449
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
+ AIWGS+L A +Y ++ELGE A + L++LEP N G Y +LSNIYA WNE K+R+
Sbjct: 450 DGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRE 509
Query: 438 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 497
+M + G++K PGCS + + H F+AGD SHP+ + +L ++ ++K ++ +
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSE 569
Query: 498 GVLESD 503
+L D
Sbjct: 570 VLLNID 575
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 219/421 (52%), Gaps = 51/421 (12%)
Query: 1 MIVRGLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
M+V G + L++ I S SLG YAYS+F H DV +N+ ++A ++ P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVG-YAYSVFAHTRVLDVLTWNSMLRAFVNSNMP 59
Query: 58 LNAVILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A+ Y + ++ S PD ++FP +LK L ++G+ +H Q V L SD+++
Sbjct: 60 RRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETT 119
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ MYA+C GDL +AR LFE M +N +
Sbjct: 120 LLNMYAAC---------------------------------GDLKSARFLFERMGHRNKV 146
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
WT++I+GY + PNEA+ L+++M+ + PDE+ M +SACA+L + +G +H++I
Sbjct: 147 VWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI 206
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ + L +AL++MYAK G + A QVF+ + +K V W+ +I G + EAL
Sbjct: 207 REMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEAL 266
Query: 297 DMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMI 354
+F + + ++PNE+T +A++SAC +G +E GR + I +++ G + +I
Sbjct: 267 QLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKG--HSVSLNNSLI 324
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ--HLIK---LE 409
D+ + G + A+++ M ++ + W S++ ++G LG AL HL++ L+
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGLALHG---LGREALAQFHLMQTTDLQ 380
Query: 410 P 410
P
Sbjct: 381 P 381
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 255/442 (57%), Gaps = 23/442 (5%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA+SIF PDV++YNT I+ L DN+++ FVLKA
Sbjct: 64 YAFSIFERIPSPDVFVYNTMIRGLTM---------------------DNFTYTFVLKACS 102
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L G+++HCQ + G+ D H+ ++LI MY + I DA +V E S N
Sbjct: 103 HLKAPFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEE--NTLAK 160
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M++GY G ++ AR +F+ M K+ SW+ LI GY + EA+ LF+ M V ++
Sbjct: 161 NAMISGYLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHIL 220
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+E A+++ LSAC QLG + G WIH YI++ + L ALIDMYAKSG I +
Sbjct: 221 PNEAALVSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGL 280
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ M + V+TW MI+ A+HG + +F M ++PN++ F+AILSAC H G V
Sbjct: 281 FQKMARRDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCV 340
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E GR+YF+ M+ +GI+P IE YGCM+DLLGRAG L +AE+L+ MP + N+ IWGSLL
Sbjct: 341 EEGRQYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLG 400
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A + D++ G A ++L++LEP + + + ++A G E+ KIRK++ + +
Sbjct: 401 ACRTHNDLKRGTWAFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTT 460
Query: 448 PGCSYIEVSKRVHEFVAGDTSH 469
G S+IEV VHEF G T H
Sbjct: 461 CGSSFIEVEGAVHEFTVGYTVH 482
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 35/268 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + D ++ I + A+ L+ + S + P+ + +L
Sbjct: 171 GRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAALVSLL 230
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L T+ GR IH T + + ALI MYA I +F +++ R +
Sbjct: 231 SACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMARR--D 288
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W M++ +A I G+A ++ LF M
Sbjct: 289 VVTWGVMISAFA--------------------------IHGHA-----SKCFQLFDEMLA 317
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIG 262
+ ++P+++ +A LSAC+ G VE G + +E +G+ + ++D+ ++G +
Sbjct: 318 DGIRPNKVIFVAILSACSHAGCVEEGRQYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLA 377
Query: 263 KALQVFENM-KNKSVITWTTMIAGLALH 289
A Q+ +M K + I W +++ H
Sbjct: 378 DAEQLILSMPKQPNSIIWGSLLGACRTH 405
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/466 (39%), Positives = 267/466 (57%), Gaps = 35/466 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I +S G+ + A +F DV +N I +T N A+ L+ + + +RPD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ V+ A + +IELGR++H G S++ +V ALI +Y+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS------------- 312
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
K G+L A LFE + K+VISW TLI GY M+ EA+
Sbjct: 313 --------------------KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALID 253
LF+ M P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LID
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G I A QVF ++ +KS+ +W MI G A+HG + D+FSRM + ++P++IT
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ +LSAC H G+++LGR F M Y + PK+E YGCMIDLLG +G +EAE+++ M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
E + IW SLL A ++G+VELGE ++LIK+EP N G+Y +LSNIYA GRWNE
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K R ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y +L
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 228/397 (57%), Gaps = 7/397 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ I+ C S F YA S+F +P++ ++NT + + +P
Sbjct: 56 MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 115
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P++Y+FPFVLK+ K + G++IH + G D D++V +L
Sbjct: 116 VSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 175
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY + DA KVFD+ R +V + ++ GYA G + NA+ LF+ + K+V+S
Sbjct: 176 ISMYVQNGRLEDAHKVFDKSPHR--DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVS 233
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W +I+GYA+ EA+ LF+ M NV+PDE M+ +SACAQ G++ELG +H +I+
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + + NALID+Y+K G++ A +FE + K VI+W T+I G L +EAL
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ PN++T ++IL AC H+G +++GR + I K G+ +ID+
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ G ++ A ++ + + + W +++ ++G
Sbjct: 414 YAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 449
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 274/464 (59%), Gaps = 10/464 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A F DV +NT I Q A L+++ D +++ ++ ++
Sbjct: 233 ARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVH----DVFTWTAMVSGYIQ 288
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+E RE+ + + + A++ Y + + A+++FD + R NV+ WN
Sbjct: 289 NRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCR--NVSTWN 342
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ GYA+ G ++ A+ LF+ M +++ +SW +IAGY+Q EA+ LF M+ E +
Sbjct: 343 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRL 402
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + +ALS CA + A+ELG+ +H + + G T + NAL+ MY K G I +A +F
Sbjct: 403 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 462
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M K +++W TMIAG + HG G EAL F M+R +KP++ T +A+LSAC H GLV+
Sbjct: 463 KEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 522
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR+YF+ M YG+ P + Y CM+DLLGRAG L+EA L++ MPFE +AAIWG+LL A
Sbjct: 523 KGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGA 582
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S ++G+ EL E A + +EP NSG Y +LSN+YA GRW + GK+R MRD GVKK+P
Sbjct: 583 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 642
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
G S+IE+ + H F GD HP+ D ++ L ++ +MK A ++
Sbjct: 643 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYV 686
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 196/403 (48%), Gaps = 40/403 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + DV +NT + Q +A +++++ ++ S+ +L A V+
Sbjct: 140 ARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMP----EKNDVSWNALLSAYVQ 195
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
S +E C G+ + + L+ + K I +AR+ FD S++V +V WN
Sbjct: 196 NSKLEEA----CVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFD--SMKVRDVVSWN 249
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
T++ GYA+ G+++ AR LF+ +V +WT +++GY Q EA LF RM N
Sbjct: 250 TIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERN--- 306
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
E++ A L+ Q VE+ + + + + ++T N +I YA+ GKI +A +F
Sbjct: 307 -EVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTW----NTMITGYAQCGKISEAKNLF 361
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M + ++W MIAG + G EAL +F MER + N +F + LS C V +E
Sbjct: 362 DKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALE 421
Query: 329 LGRR-YFNIMKSRYGIEPKIEQYGCMID-----LLGRAGYLQEAEKLLRRMPFEANAAIW 382
LG++ + ++K Y + GC + + + G ++EA L + M + + W
Sbjct: 422 LGKQLHGRLVKGGY-------ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSW 473
Query: 383 GSLLAASNIYGDVELGECALQHLIK-----LEPHNSGNYAILS 420
+++A + +G GE AL+ L+P ++ A+LS
Sbjct: 474 NTMIAGYSRHG---FGEEALRFFESMKREGLKPDDATMVAVLS 513
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 45/292 (15%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR +FDE+ R ++ WN M+ GY + +L AR LFE M E++V SW T+++GYAQ
Sbjct: 109 ARMLFDEMPER--DLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNG 166
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALS----------ACAQLGAVE----------LG 229
++A +F RM +N +++ A LS AC G+ E LG
Sbjct: 167 CVDDARRVFDRMPEKN----DVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLG 222
Query: 230 EWI--------HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 281
++ + + + +V N +I YA++G+I +A Q+F+ V TWT
Sbjct: 223 GFVKKKKIVEARQFFDSMKVRDVVSW-NTIITGYAQNGEIDEARQLFDESPVHDVFTWTA 281
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
M++G + + EA ++F RM + NE+++ A+L+ VE+ + F++M R
Sbjct: 282 MVSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCR- 336
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + MI + G + EA+ L +MP + + W +++A + G
Sbjct: 337 ----NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSG 383
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 287/508 (56%), Gaps = 52/508 (10%)
Query: 7 DQNNHLLSRFIDSCSSLGFS--------DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
D HL+ + + + ++ YAY++FT P+V+ +NT + ++DNP
Sbjct: 53 DMGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPS 112
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ Y ++ S + PD +++PF+LKA+ K + G IH T+ G +S V V +L+
Sbjct: 113 PALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLL 172
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+YA+C GD +A +FELM ++++++
Sbjct: 173 HIYAAC---------------------------------GDTESAHNVFELMRDRDLVAX 199
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
++I G+A +P+EA+TLFR M E V+PD +++ LSA A+LGA+ELG +H Y+ +
Sbjct: 200 ISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK 259
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL + N+L+D+YAK I + ++ ++WT++I GLA++G G EAL++
Sbjct: 260 VGLRENSHVTNSLLDLYAKCDAIWEX--------ERNAVSWTSLIVGLAVNGFGEEALEL 311
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F ME + P+EITF+ +L AC H G+++ G YF MK +GI P+IE YGCM+DLL
Sbjct: 312 FREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLS 371
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG +++A + ++ MP + NA W +LL A I+G + LGE A HL+KLEP +SG+Y +
Sbjct: 372 RAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVL 431
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSN+Y RW + IR+ M GVKK G S +E+ RV+EF G+ SHP +Y +
Sbjct: 432 LSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYAL 491
Query: 479 LCKINGQMK---FAEHLQNEFSGVLESD 503
L KI +K + H N + + E +
Sbjct: 492 LEKITELLKLEGYVPHTANVLADIEEEE 519
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/374 (45%), Positives = 250/374 (66%), Gaps = 2/374 (0%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+I YA I +A+++FDE+ R N+ WN+M++G+ K G++ A LF M ++V
Sbjct: 102 TIINGYAIVGKIDEAKRLFDEMPER--NLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDV 159
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SW +++A YAQ +PNEA+ LF +M+ VKP E +++ LSACA LGA++ G +H Y
Sbjct: 160 VSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTY 219
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I + + AL+DMYAK GKI A QVF M++K V+ W T+IAG+A+HG +EA
Sbjct: 220 INDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEA 279
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+F M+ A V+PN+ITF+A+LSAC H G+V+ G++ + M S YGIEPK+E Y C+ID
Sbjct: 280 QQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVID 339
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LL RAG L+EA +L+ MP E N + G+LL I+G+ ELGE + LI L+P +SG
Sbjct: 340 LLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGR 399
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA +W+++ K+R +M+ G+ K+PG S IE+ VH FVAGD SHP+ +++
Sbjct: 400 YILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKI 459
Query: 476 YQILCKINGQMKFA 489
Y L +I+ ++K A
Sbjct: 460 YDKLNEIHTRLKSA 473
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 43/294 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M R L N +LS F+ G + A+ +F+ DV +N+ + Q P A
Sbjct: 123 MPERNLVSWNSMLSGFV----KCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEA 178
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+++++A ++P + +L A L ++ G +H ++ + V AL+ M
Sbjct: 179 LALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDM 238
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C I A +VF+ + + +V WNT++AG A G + A+ LF+ M E
Sbjct: 239 YAKCGKISLATQVFNAMESK--DVLAWNTIIAGMAIHGHVKEAQQLFKEMKEA------- 289
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQY 239
+V+P++I +A LSAC+ G V+ G+ + + + Y
Sbjct: 290 ------------------------SVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSY 325
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM---KNKSVITWTTMIAGLALHG 290
G+ V + +ID+ A++G + +A+++ M N S + ++ G +HG
Sbjct: 326 GIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSAL--GALLGGCRIHG 377
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/456 (40%), Positives = 280/456 (61%), Gaps = 41/456 (8%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRP-DNYSFPFVLKAVVKLSTIELGREIHCQ 101
++NT I+ ++DNP A++LY + A + P +N++FPF+L + +LS++E G E+H
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 102 TVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLN 161
+ G +SD+ V ALI +Y+ VF G+LN
Sbjct: 61 IIKHGFESDLFVRNALIHLYS----------VF-----------------------GNLN 87
Query: 162 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 221
AR LF+ ++++S+ T+I GYA+++QP A+ LF MQ DE+ ++A LSACA
Sbjct: 88 LARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ----NSDEVTLVAVLSACA 143
Query: 222 QLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KN-KSVIT 278
+LGA +LG+ + H YIE N L A++DMYAK G I AL++F + KN K+
Sbjct: 144 RLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFV 203
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
+ +MIAGLA HGLG A+ +F + +KP+E+TF+ +L AC H GL+E G++ F M
Sbjct: 204 FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMF 263
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+ YGI+P++E YGCM+DLLGR G L+EA L+++MPFEAN+ IW +LL+A +G+V++G
Sbjct: 264 NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIG 323
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
E A Q L+++E + Y +LSNI A +W E+ ++RKVM D G++K PG SYIE+
Sbjct: 324 EIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGA 383
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
+H FVA D SHP + +L + ++K A ++ N
Sbjct: 384 IHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPN 419
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 285/492 (57%), Gaps = 41/492 (8%)
Query: 1 MIVRGLDQNNHLLSRFI--DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+V GL N ++ I S S G YA+ +F KPDV + N ++ Q+ P
Sbjct: 35 MVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEEIPKPDVSICNHVLRGSAQSLKPE 94
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
V LY +++ + PD Y+F FVLKA KL G IH + V G + +V ALI
Sbjct: 95 KTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVRHGFLLNEYVKNALI 154
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG-------------------- 158
+A+C + A ++FD+ S + VA W++M +GYAK G
Sbjct: 155 LFHANCGDLGIASELFDD-SAKAHKVA-WSSMTSGYAKRGKIDEAMRLFDEMPDKDQVAW 212
Query: 159 -----------DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++++AR LF+ TEK+V++W +I+GY P EA+++F+ M+
Sbjct: 213 NVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGEH 272
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIV----PLNNALIDMYAKSGKIG 262
PD + +L+ LSACA LG +E G+ +H YI E +++ + P+ NALIDMYAK G I
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 332
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+A++VF MK++ + TW T+I GLALH +++MF M+R +V PNE+TFI ++ AC
Sbjct: 333 RAIEVFRGMKDRDLSTWNTLIVGLALHH-AEGSVEMFEEMQRLKVWPNEVTFIGVILACS 391
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G V+ GR+YF++M+ Y IEP I+ YGCM+D+LGRAG L+EA + M E NA +W
Sbjct: 392 HSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIVW 451
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
+LL A IYG+VELG+ A + L+ + SG+Y +LSNIYA G+W+ K+RK+ D
Sbjct: 452 RTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDT 511
Query: 443 GVKKMPGCSYIE 454
VKK G S IE
Sbjct: 512 RVKKPTGISLIE 523
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 271/472 (57%), Gaps = 33/472 (6%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F + D+ + I L ++ A+ ++ +Q + L+P+ ++ +L A +
Sbjct: 503 LFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAA 562
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
++ GR IH Q + GL +D HV L+ MY+ C
Sbjct: 563 LDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC--------------------------- 595
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G + +AR +F+ MT+++++++ +I GYA + EA+ LF R+Q E +KPD++
Sbjct: 596 ------GSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 649
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ L+ACA G++E + IH+ + + G + L NAL+ YAK G AL VF+ M
Sbjct: 650 TYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM 709
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
++VI+W +I G A HG G++ L +F RM+ +KP+ +TF+++LSAC H GL+E GR
Sbjct: 710 MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGR 769
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
RYF M +GI P IE YGCM+DLLGRAG L E E L++ MPF+AN IWG+LL A I
Sbjct: 770 RYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRI 829
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+G+V + E A + +KL+P N+ Y LS++YA G W+ + K+RK+M GV K PG S
Sbjct: 830 HGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 889
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+IEV ++H FVA D SHP+ +++Y L K+ MK ++ + S + + D
Sbjct: 890 WIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVD 941
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 175/357 (49%), Gaps = 40/357 (11%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F D+ +NT I L + N A +Y+++Q + P+ ++ +L A V +
Sbjct: 402 VFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTA 461
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ GREIH + V G D+ V ALI M
Sbjct: 462 LHWGREIHSRVVKDGFMFDISVQNALISM------------------------------- 490
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
YA+ G + +AR LF M K++ISWT +I G A+ EA+ +F+ MQ +KP+ +
Sbjct: 491 --YARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRV 548
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ L+AC+ A++ G IH + + GL T + N L++MY+ G + A QVF+ M
Sbjct: 549 TYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ ++ + MI G A H LG+EAL +F R++ +KP+++T+I +L+AC + G +E +
Sbjct: 609 TQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAK 668
Query: 332 RYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIWG 383
+ ++K Y + + ++ + G +A +K+++R NA I G
Sbjct: 669 EIHSLVLKDGYLSDTSLGN--ALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGG 723
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 166/346 (47%), Gaps = 36/346 (10%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F V + I + A ++ K+Q + P+ ++ VL A
Sbjct: 298 AREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSG 357
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ ++ G+ +H + G +SD+ V AL++MYA
Sbjct: 358 PAALKWGKTVHSHILNAGHESDLAVGTALVKMYA-------------------------- 391
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
K G + R +FE + +++I+W T+I G A+ EA ++ +MQ E + P
Sbjct: 392 -------KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMP 444
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++I + L+AC A+ G IH+ + + G + + NALI MYA+ G I A +F
Sbjct: 445 NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLF 504
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
M K +I+WT MI GLA GLG EAL +F M++A +KPN +T+ +IL+AC ++
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564
Query: 329 LGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
GRR + ++++ G+ ++++ G +++A ++ RM
Sbjct: 565 WGRRIHQQVIEA--GLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 40/371 (10%)
Query: 6 LDQN--NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
LDQ N L++ +I C S+ + ++ H + V+ +N + Q A+ L
Sbjct: 174 LDQYTVNALINMYI-QCGSIEEARQVWNKLNHTERT-VHSWNAMVVGYVQYGYIEEALKL 231
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++Q L + +L + S +E GREIH + +
Sbjct: 232 LREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAM-------------------- 271
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
AR +FD V V N ++ YAK G ++ AR +F+ M K+V+SWT +I
Sbjct: 272 -----KARLLFD--------VNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIG 318
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GYA A +F++MQ E V P+ I + L+A + A++ G+ +H++I G +
Sbjct: 319 GYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHES 378
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ + AL+ MYAK G QVFE + N+ +I W TMI GLA G EA +++ +M+
Sbjct: 379 DLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQ 438
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R + PN+IT++ +L+AC + + GR + ++K + + ++ +I + R G
Sbjct: 439 REGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQN--ALISMYARCGS 496
Query: 363 LQEAEKLLRRM 373
+++A L +M
Sbjct: 497 IKDARLLFNKM 507
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 39/364 (10%)
Query: 25 FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
F+ F +SK + L++ T K A+ + +Q R ++ + +LK
Sbjct: 91 FNSNGIRYFNGRSKAN-KLHSHTYKDERTITGKDRAMDVVQYLQQQGARVNSCDYMKMLK 149
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
+++ + GRE+H + D + V ALI MY C I +AR+V+++L+ V
Sbjct: 150 RCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTV 209
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
WN MV GY + G + EA+ L R MQ
Sbjct: 210 HSWNAMVVGYVQYGYI-------------------------------EEALKLLREMQQH 238
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+ + LS+C A+E G IH + L V + N +++MYAK G I +A
Sbjct: 239 GLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEA 298
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+VF+ M+ KSV++WT +I G A G A ++F +M++ V PN IT+I +L+A
Sbjct: 299 REVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGP 358
Query: 325 GLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANA 379
++ G+ + +I+ + G E + ++ + + G ++ EKL+ R N
Sbjct: 359 AALKWGKTVHSHILNA--GHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNT 416
Query: 380 AIWG 383
I G
Sbjct: 417 MIGG 420
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 35/292 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL + H+ + ++ S G A +F ++ D+ YN I + A
Sbjct: 573 VIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEA 632
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L++++Q L+PD ++ +L A ++E +EIH + G SD + AL+
Sbjct: 633 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVST 692
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C DA VFD++ R NV WN ++ G A+ G
Sbjct: 693 YAKCGSFSDALLVFDKMMKR--NVISWNAIIGGCAQHG---------------------- 728
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
+ + + LF RM++E +KPD + ++ LSAC+ G +E G + + +
Sbjct: 729 ---------RGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDF 779
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
G+ + ++D+ ++G++ + + + M + W ++ +HG
Sbjct: 780 GITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHG 831
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 272/479 (56%), Gaps = 3/479 (0%)
Query: 2 IVRGLDQNNHLLS-RFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+ GL N +S + S + G A +F PD+ + + + + D+ A
Sbjct: 44 LTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKA 103
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +++ AS RPD ++ L A L +G +H GLDS++ V AL+ M
Sbjct: 104 ISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDM 163
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C AR VFD + ++ + W +M+ GY K +++A + F M K+ +SWT
Sbjct: 164 YCRCGKFEPARTVFDRMLVK--DEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTA 221
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI G+ Q QP +A+ LF +M +E +P+ I ++ LSACA +GA++LG IH Y +
Sbjct: 222 LITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSN 281
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
T + + NAL+DMYAKSG I A VFE ++ K TWTTMI+ + G GR+A+++F
Sbjct: 282 ATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFW 341
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M R+ + PN +TF+++LSAC H GL++ GR F+ M+ Y I+P++E YGCM+DLLGR
Sbjct: 342 DMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRG 401
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L+EAE L+ M E + IW SLL+A +G+ L E A +IK EP + G Y +L
Sbjct: 402 GLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGMEIIKREPGDDGVYVLLW 461
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
N+YA+ RW E+ +RK M + K PGCS+IEV VHEF+ D +H +Y L
Sbjct: 462 NMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDKTHDARREIYVTL 520
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 248/399 (62%), Gaps = 2/399 (0%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
++ S + PD VL + G+ IH + + D V AL+ MYASC
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCAD 60
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ A K+++ +S + + + TMV GYAK G + A ++F M K+V+SW+ +IAGYA
Sbjct: 61 MEMAEKLYNRVSEK--EIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYA 118
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ +P EA+ LF MQ VKPDEI ML+ +SACA +GA+E IH+++E + + I+P
Sbjct: 119 ESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILP 178
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ NALIDM++K G + AL VF M K+V+TWT++I A+HG GR AL +F M+
Sbjct: 179 IGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEG 238
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
++PN +TF+ +L ACCH GLVE GR F IM +Y IEP E YGCM+DLLGRA L +A
Sbjct: 239 IQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQA 298
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
L++ M N IWGSLLAA ++GD+ELG A + +++L+P++ G +LSNIYA
Sbjct: 299 ADLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEY 358
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
G WN+ ++R VM G K GCS++E++ VH+F G
Sbjct: 359 GNWNDVKEVRGVMEVQGTWKKKGCSWMELNGSVHQFAVG 397
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A+SIF DV ++ I ++ P+ A+ L++ +Q S ++PD + V+
Sbjct: 90 GKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVI 149
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + +E R IH + + + ALI M++ C + A VF+ + + N
Sbjct: 150 SACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTLALDVFNAMPQK--N 207
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W +++ A GD A+TLF M+
Sbjct: 208 VVTWTSIITASAMHGD-------------------------------GRSALTLFENMKS 236
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E ++P+ + L L AC G VE G + ++QY + + ++D+ ++ +G
Sbjct: 237 EGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLG 296
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALHG 290
+A + ++M +V+ W +++A +HG
Sbjct: 297 QAADLIQSMHLRPNVVIWGSLLAACRMHG 325
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 293/524 (55%), Gaps = 37/524 (7%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I+ LD +N L S I+ S +G + A +F+ + DV +N I + Q A+
Sbjct: 1405 ILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKAL 1464
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ + +++ LR D+ + +L A S I+LG+E HC + L+SDV V ++I MY
Sbjct: 1465 NMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMY 1524
Query: 122 ASCKCIYDARKVFD---ELSLRVWN------------------------------VAVWN 148
A C+ I DARKVFD E L +WN V WN
Sbjct: 1525 AKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWN 1584
Query: 149 TMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+++ G+ + G +N A+ +F M + N+I+WTTLI+G AQ EAI F++MQ
Sbjct: 1585 SVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEA 1644
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
++P ++ + L AC + ++ G IH +I ++ VP+ +L+DMYAK G I +A
Sbjct: 1645 GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEA 1704
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+VF M +K + + MI+ ALHG EAL +F +++ ++P+ ITF +ILSAC H
Sbjct: 1705 KKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHA 1764
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV G F M S++ + P +E YGC++ LL R G L EA +L+ MPF+ +A I GS
Sbjct: 1765 GLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGS 1824
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A + ++ELGE +HL KLEP NSGNY LSN YA GRW E +R +M+ G+
Sbjct: 1825 LLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGL 1884
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+K PGCS+I+ +++ FVAGD SHP + +Y +L + +M+F
Sbjct: 1885 RKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRF 1928
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 204/444 (45%), Gaps = 46/444 (10%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N ++ ++ + + F + A +F +V+ + + C+ +A++ + ++
Sbjct: 1209 KNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEM 1268
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
Q + + PDN+ P VLKA L I LG+ +H + G + V V ++L+ MY C +
Sbjct: 1269 QENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVL 1328
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
DARKVFD + + NV WN+M+ GY + G LN
Sbjct: 1329 EDARKVFDSMVEK--NVVTWNSMIVGYVQNG-LN-------------------------- 1359
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
EAI +F M+VE ++P + + + LSA A L A+ G+ H L+ L
Sbjct: 1360 ----QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 1415
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
+++I+ Y+K G I A VF M K V+TW +I+ H +AL+M M +
Sbjct: 1416 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENL 1475
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+ + +T +ILSA ++LG+ + R +E + +ID+ + + +A
Sbjct: 1476 RFDSVTLSSILSASAVTSNIKLGKEG-HCYCIRRNLESDVVVANSIIDMYAKCERIDDAR 1534
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE----PHN--SGNYAILSN 421
K+ E + +W +LLAA Y V L AL+ +++ P N S N IL
Sbjct: 1535 KVFDSTT-ERDLVLWNTLLAA---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGF 1590
Query: 422 IYAILGRWNESGKIRKVMRDMGVK 445
+ G+ NE+ + M+ +G +
Sbjct: 1591 LRN--GQVNEAKDMFSQMQSLGFQ 1612
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 188/536 (35%), Positives = 290/536 (54%), Gaps = 48/536 (8%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
QN L + + S ++ G +F S +V YN I++ + ++++ ++
Sbjct: 51 QNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREM 110
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
RPDNY++P VLKA + G IH + GLD ++ V LI MY C C+
Sbjct: 111 VNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCL 170
Query: 128 YDARKVFDELSLRVW-NVAVWNTMVAGYAKVGDLNNA----------------------- 163
++AR+VFDE+ +W +V WN+MVAGYA ++A
Sbjct: 171 FEARRVFDEM---IWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLM 227
Query: 164 --------------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+F + KN+ISW +I Y + P +A+ L+ +M+ V+PD
Sbjct: 228 PAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPD 287
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
I + L AC L A+ LG IH Y+E+ L + L N+LIDMYA+ G + A +VF+
Sbjct: 288 AITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFD 347
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
MK + V +WT++I+ + G G A+ +F+ M + P+ I F+AILSAC H GL++
Sbjct: 348 RMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDE 407
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
GR YF M Y I P+IE Y C++DLLGRAG + EA ++++MP E N +W +LL++
Sbjct: 408 GRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSC 467
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
++ ++++G A +L++L P SG Y +LSNIYA GRW E +IR VM+ ++K PG
Sbjct: 468 RVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPG 527
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVA 505
S +E++ +VH F+AGDTSHP +Y+ L + +MK E V E+D A
Sbjct: 528 ISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMK-------ELGYVPETDSA 576
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 189/462 (40%), Positives = 270/462 (58%), Gaps = 20/462 (4%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P ++N I+ ++ P AV Y + +S PD ++ +L A + ++ G ++
Sbjct: 4 PTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQV 63
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + G S+V V +LI YA + AR VFD + R +V WN+M+AGY +
Sbjct: 64 HATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQR--SVVSWNSMLAGYVRCA 121
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
D + AR +F++M +NV+SWTT++AG A+ + +A+ LF M+ V+ D++A++AALS
Sbjct: 122 DFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALS 181
Query: 219 ACAQLGAVELGEWIHNYIEQYGL-----NTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
ACA+LG ++LG WIH Y++Q + V LNNALI MYA G + +A QVF M
Sbjct: 182 ACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPR 241
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVK-----PNEITFIAILSACCHVGLVE 328
KS ++WT+MI A GLG+EALD+F M VK P+EITFI +L AC H G V+
Sbjct: 242 KSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVD 301
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G + F MK +GI P IE YGCM+DLL RAG L EA L+ MP N AIWG+LL
Sbjct: 302 EGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGG 361
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYA-----ILSNIYAILGRWNESGKIRKVMRDMG 443
I+ + EL A Q KL P +G+ A +LSNIYA RW + +R+ M +MG
Sbjct: 362 CRIHRNSEL---ASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMG 418
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
VKK PG S+I+++ VH F+AGD +H +Y+ L + Q
Sbjct: 419 VKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVTKQ 460
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M N + W +I G A +A++ ++ M ++ +P+ T ++LSAC GLV+ G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 331 RR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + ++ Y ++ +I G ++ A + MP + + W S+LA
Sbjct: 61 EQVHATVLVKGYCSNVFVDT--SLITFYAGRGGVERARHVFDGMP-QRSVVSWNSMLAG 116
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 258/411 (62%), Gaps = 5/411 (1%)
Query: 72 LRPDNYSFPFVLKAVVKLSTI--ELGREIHCQTVGTGLDS-DVHVVAALIQMYASCKCIY 128
+ P++ +F +L L + LG +H T GLD+ ++ V AL+ MYA C +
Sbjct: 6 IDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVE 65
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
+R FDEL +V N WNTM+ G+ + G + A +F+ M E+ VISWT LI G+ +M
Sbjct: 66 LSRLCFDEL--KVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKM 123
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
EA+ FR+MQV V+PD + ++ LSACA LGA+ LG W+H Y + GL V +
Sbjct: 124 GLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKIC 183
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
N+LID+Y++ G I A QVFE M +++++W ++I GLA +G EAL+ F M++ K
Sbjct: 184 NSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFK 243
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PN+++F L+AC H GLV+ G +YF+IM+ + I P+IE YGC++DL RAG L++A
Sbjct: 244 PNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMS 303
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
+++ MP + N + GSLLAA GDVEL E + +L+ L+P NY +LSNIYA +GR
Sbjct: 304 VVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVGR 363
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
W+ + K R M+ +G++K PG S IE+ +HEFVAGD SH + +Y +L
Sbjct: 364 WDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSML 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 135/340 (39%), Gaps = 86/340 (25%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N+ + ID G A +F + V + I + A+ + K+
Sbjct: 77 KNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKM 136
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
Q S + PD + VL A L + LG +H + GL +V + +LI +Y+ C I
Sbjct: 137 QVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAI 196
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
AR+VF+++ R + WN+++ G A G TE
Sbjct: 197 ELARQVFEKMGER--TLVSWNSIIGGLAANG-----------FTE--------------- 228
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-------EWIHNY---IE 237
EA+ F MQ + KP++++ AL+AC+ G V+ G E +H IE
Sbjct: 229 -----EALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIE 283
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
YG ++D+Y+++G++ A+ V +NM
Sbjct: 284 HYG---------CIVDLYSRAGRLEDAMSVVQNMP------------------------- 309
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+KPNE+ ++L+AC G VEL R N +
Sbjct: 310 ---------MKPNEVVVGSLLAACRTRGDVELAERLMNYL 340
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 281/482 (58%), Gaps = 37/482 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F SK +++L+N I+ A+ LY +++ L PD ++FPFVLKA
Sbjct: 55 AHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSA 114
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
LS +E G++IH + +GL+SDV V AALI MYA C C+ AR+VFD++ R +V WN
Sbjct: 115 LSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDER--DVVCWN 172
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+M+A Y++ G QP+E++ L R M +KP
Sbjct: 173 SMLATYSQNG-------------------------------QPDESLALCRVMAFNGLKP 201
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
E + +++A A G + G+ +H Y ++G + + AL+DMYAKSG + A +F
Sbjct: 202 TEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLF 261
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E ++ K V++W MI G A+HG EALD+F M + +V P+ ITF+ +L+AC H GL+
Sbjct: 262 ELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLN 320
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ +F M S + I P ++ Y CMIDLLG G L+EA KL+ M E +A +WG+LL +
Sbjct: 321 EGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHS 380
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I+G+VE+GE AL+ L++LEP + GNY ILSN+YA G+W+ ++R +M + G+KK
Sbjct: 381 CKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSI 440
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESDVA 505
CS+IEV +VH F++ DTSHP + +Y L + MK +A + + F V + +
Sbjct: 441 ACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKV 500
Query: 506 SM 507
M
Sbjct: 501 DM 502
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 35/315 (11%)
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
+ +L++ V IE G+++H + G+ + + L+ +Y C
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICN------------- 50
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
L NA LF+ ++++N+ W +I GYA AI+L+
Sbjct: 51 --------------------SLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLY 90
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
+M+ + PD+ L AC+ L A+E G+ IH + + GL + V + ALIDMYAK
Sbjct: 91 YQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKC 150
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G + A QVF+ + + V+ W +M+A + +G E+L + M +KP E TF+ +
Sbjct: 151 GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISI 210
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+A GL+ G+ + R+G E + ++D+ ++G + A L + E
Sbjct: 211 AASADNGLLPQGKE-LHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLE-EKR 268
Query: 379 AAIWGSLLAASNIYG 393
W +++ ++G
Sbjct: 269 VVSWNAMITGYAMHG 283
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 39/308 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL+ + + + ID + G + A +F + DV +N+ + Q P +
Sbjct: 128 VIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDES 187
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L + + L+P +F + A + G+E+H + G +S+ V AL+ M
Sbjct: 188 LALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDM 247
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA + AR +F+ L + V WN M+ GYA G
Sbjct: 248 YAKSGSVNVARSLFELLEEK--RVVSWNAMITGYAMHG---------------------- 283
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-IHNYIEQY 239
NEA+ LF+ M+ V PD I + L+AC+ G + G+ + I +
Sbjct: 284 ---------HANEALDLFKEMK-GKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDF 333
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREA 295
+ V +ID+ G++ +A ++ M+ W ++ +HG +G A
Sbjct: 334 NIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELA 393
Query: 296 LDMFSRME 303
L+ +E
Sbjct: 394 LEKLVELE 401
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L +C A+E G+ +H I Q G++ L L+++Y + A +F+ + +++
Sbjct: 8 LQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNL 67
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFN 335
W MI G A +G A+ ++ +M + P++ TF +L AC + +E G++ + +
Sbjct: 68 FLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKD 127
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 393
+++S G+E + +ID+ + G ++ A ++ ++ E + W S+LA + N
Sbjct: 128 VIRS--GLESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLATYSQNGQP 184
Query: 394 DVELGECALQHLIKLEPHNSGNYAI 418
D L C + L+P G + I
Sbjct: 185 DESLALCRVMAFNGLKP-TEGTFVI 208
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 179/458 (39%), Positives = 273/458 (59%), Gaps = 2/458 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D++ + + + + ++ A +F + D+ + + + T N ++L
Sbjct: 23 GADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLL 82
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
NK++ S + PD VL + G+ IH + + D + +ALI MYASC
Sbjct: 83 NKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASC 142
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A K++ + + ++ MV GYAK G + AR++F M EK+V+SW+ +I+
Sbjct: 143 MDMEMADKIYSGMQRK--DLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISA 200
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YA+ +QP+E + LF +MQ V PDEI ML+ +SACA +G+++ WIH+ + +G I
Sbjct: 201 YAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKI 260
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + NALIDM++K G + AL +F M K+VITWT+MIA A+HG G AL +F +M+
Sbjct: 261 LSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKG 320
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V+PN +TF+ +L ACCH GLV GR F M Y IEPK E YGCM+DL+GRA +Q
Sbjct: 321 EGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQ 380
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA L+ M N AIWGSLLAA ++GD+ELGE A + +++L+P++ G Y +LSNI+A
Sbjct: 381 EAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHA 440
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEF 462
G WN + K+R +M+ GV K G S++E++ VH F
Sbjct: 441 KSGNWNNAQKLRVMMKVHGVSKETGYSWLELNCTVHGF 478
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 150/342 (43%), Gaps = 66/342 (19%)
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+A + + R H V G D D V AL+ YA+C+ + +AR+VFD
Sbjct: 1 RAAARARWTDTVRGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDG------- 53
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
M E+++++W ++ Y E + L +M+
Sbjct: 54 --------------------------MPERDLVAWGVMLDSYFNTQNYRETLLLLNKMKR 87
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM--------- 254
V PD++ + LS C + G+ IH+YI+ + L++ALI+M
Sbjct: 88 SRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEM 147
Query: 255 ----------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
YAK+GKI A +F +M K V++W+ MI+ A +
Sbjct: 148 ADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQP 207
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
E L++F++M+ V P+EIT ++++SAC ++G ++ R +I+ +G +
Sbjct: 208 SEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIV-GNHGFYKILSICNA 266
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ID+ + G L A + MP N W S++AA ++GD
Sbjct: 267 LIDMFSKCGSLTLALNMFNAMP-RKNVITWTSMIAAFAMHGD 307
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 179/459 (38%), Positives = 276/459 (60%), Gaps = 10/459 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F DV +NT I Q + A L+N+ S +R D +++ ++ V+
Sbjct: 220 ARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE---SPIR-DVFTWTAMVSGYVQ 275
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ R+ + + +++ A++ Y K + A ++F+ + R N++ WN
Sbjct: 276 NGMVDEARKYFDEMP---VKNEISY-NAMLAGYVQYKKMVIAGELFEAMPCR--NISSWN 329
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ GY + G + AR LF++M +++ +SW +I+GYAQ EA+ +F M+ +
Sbjct: 330 TMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESS 389
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ ALS CA + A+ELG+ +H + + G T + NAL+ MY K G +A VF
Sbjct: 390 NRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVF 449
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E ++ K V++W TMIAG A HG GR+AL +F M++A VKP+EIT + +LSAC H GL++
Sbjct: 450 EGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLID 509
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G YF M Y ++P + Y CMIDLLGRAG L+EAE L+R MPF+ AA WG+LL A
Sbjct: 510 RGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGA 569
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S I+G+ ELGE A + + K+EP NSG Y +LSN+YA GRW + GK+R MR+ GV+K+
Sbjct: 570 SRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVT 629
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G S++EV ++H F GD HP+ DR+Y L +++ +M+
Sbjct: 630 GYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMR 668
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 53/314 (16%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
L+ Y + +AR++F+ S W + WN ++ GY K L +AR LF+ M ++V
Sbjct: 175 GLLAAYVHNGRLKEARRLFESQS--NWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDV 232
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISW T+I+GYAQ+ ++A LF + +V A +S Q G V+ Y
Sbjct: 233 ISWNTMISGYAQVGDLSQAKRLFNESPIRDV----FTWTAMVSGYVQNGMVDEAR---KY 285
Query: 236 IEQYGLNTIVPLN------------------------------NALIDMYAKSGKIGKAL 265
++ + + N N +I Y ++G I +A
Sbjct: 286 FDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQAR 345
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
++F+ M + ++W +I+G A +G EAL+MF M+R N TF LS C +
Sbjct: 346 KLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIA 405
Query: 326 LVELGRR-YFNIMKSRYGIEPKIEQYGCMID--LLG---RAGYLQEAEKLLRRMPFEANA 379
+ELG++ + ++K+ + + GC + LLG + G EA + + E +
Sbjct: 406 ALELGKQVHGQVVKAGF-------ETGCFVGNALLGMYFKCGSTDEANDVFEGIE-EKDV 457
Query: 380 AIWGSLLAASNIYG 393
W +++A +G
Sbjct: 458 VSWNTMIAGYARHG 471
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR +FD++ R ++ WN M+ GY + L A LF+LM +K+V+SW +++GYAQ
Sbjct: 96 ARDLFDKMPER--DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNG 153
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+EA +F +M N I+ L+A G ++ + + L + N
Sbjct: 154 FVDEAREVFNKMPHRN----SISWNGLLAAYVHNGRLKEARRLFESQSNWELISW----N 205
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
L+ Y K +G A Q+F+ M + VI+W TMI+G A G +A +F+ V
Sbjct: 206 CLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV-- 263
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
T+ A++S G+V+ R+YF+ M + I Y M+ AGY+Q + +
Sbjct: 264 --FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEI-----SYNAML-----AGYVQYKKMV 311
Query: 370 LRRMPFEA----NAAIWGSLLAASNIYGDV 395
+ FEA N + W +++ G +
Sbjct: 312 IAGELFEAMPCRNISSWNTMITGYGQNGGI 341
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A +VF+ + R + +N M++GY + + AR LF+ M E+++ SW ++ GY +
Sbjct: 65 ALRVFNSMPRR--SSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNR 122
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+ EA LF M K D ++ A LS AQ G V+ + N + N+I N
Sbjct: 123 RLGEAHKLFDLMP----KKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH--RNSISW--N 174
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
L+ Y +G++ +A ++FE+ N +I+W ++ G + +A +F RM V
Sbjct: 175 GLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDV-- 232
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
I++ ++S VG + +R FN R + + M+ + G + EA K
Sbjct: 233 --ISWNTMISGYAQVGDLSQAKRLFNESPIR-----DVFTWTAMVSGYVQNGMVDEARKY 285
Query: 370 LRRMPFEANAAIWGSLLAA 388
MP + N + ++LA
Sbjct: 286 FDEMPVK-NEISYNAMLAG 303
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 116/253 (45%), Gaps = 49/253 (19%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ WN ++ + + G ++A +F M ++ +S+ +I+GY + + + A LF +M
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM- 103
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
P+ +L W N ++ Y ++ ++G
Sbjct: 104 -----PER----------------DLFSW-----------------NVMLTGYVRNRRLG 125
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+A ++F+ M K V++W M++G A +G EA ++F++M N I++ +L+A
Sbjct: 126 EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYV 181
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G ++ RR F +S+ E + + C++ + L +A +L RMP + W
Sbjct: 182 HNGRLKEARRLF---ESQSNWE--LISWNCLMGGYVKRNMLGDARQLFDRMPVR-DVISW 235
Query: 383 GSLLAASNIYGDV 395
++++ GD+
Sbjct: 236 NTMISGYAQVGDL 248
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 281/463 (60%), Gaps = 2/463 (0%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN-KIQASALRPDNYSFPFVLKA 85
D A ++F + PD+ +N+ I C + A+ ++ +++S+L+PD ++ VL A
Sbjct: 228 DLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSA 287
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+++LG++IH V +D V ALI MYA + A ++ + NV
Sbjct: 288 CANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVI 347
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
+ +++ GY K+GD++ ARA+F+ + ++V++WT +I GYAQ ++A+ LFR M E
Sbjct: 348 AFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREG 407
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
KP+ + A LS + L +++ G+ +H + + V + NALI MY++SG I A
Sbjct: 408 PKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDAR 467
Query: 266 QVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F ++ + + +TWT+MI LA HGLG EA+++F +M R +KP+ IT++ +LSAC HV
Sbjct: 468 KIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHV 527
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLVE G+ YFN+MK+ + IEP Y CMIDLLGRAG L+EA +R MP E + WGS
Sbjct: 528 GLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGS 587
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL++ ++ V+L + A + L+ ++P+NSG Y L+N + G+W ++ K+RK M+D V
Sbjct: 588 LLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAV 647
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
KK G S++++ +VH F D HP D +Y ++ KI ++K
Sbjct: 648 KKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIK 690
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 208/435 (47%), Gaps = 43/435 (9%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F +PD + T I +AV + ++ +S + P ++F VL
Sbjct: 93 GNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVL 152
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ +++G+++H V G V V +L+ MYA C A+ VFD + L+ +
Sbjct: 153 ASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK--D 210
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-Q 202
+ WNTM++ + + + A ALF+ MT+ +++SW ++I GY A+ F M +
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG--- 259
++KPD+ + + LSACA +++LG+ IH +I + ++ + NALI MYAKSG
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVE 330
Query: 260 ---------------------------KIGK---ALQVFENMKNKSVITWTTMIAGLALH 289
KIG A +F+++K++ V+ WT MI G A +
Sbjct: 331 VAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN 390
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
GL +AL +F M R KPN T A+LS + ++ G++ + + R +
Sbjct: 391 GLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQ-LHAVAIRLEEVSSVSV 449
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG----DVELGECALQHL 405
+I + R+G +++A K+ + + W S++ + +G +EL E L+
Sbjct: 450 GNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLR-- 507
Query: 406 IKLEPHNSGNYAILS 420
I L+P + +LS
Sbjct: 508 INLKPDHITYVGVLS 522
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 178/350 (50%), Gaps = 39/350 (11%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDS-DVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L++ +K +GR IH + + GL V + L+ +Y DA ++FDE+ L+
Sbjct: 18 LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
WNT+++ +AK G+L++AR +F+ + + + +SWTT+I GY + A+ F R
Sbjct: 78 --TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLR 135
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG- 259
M + P + L++CA A+++G+ +H+++ + G + +VP+ N+L++MYAK G
Sbjct: 136 MVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGD 195
Query: 260 ------------------------------KIGKALQVFENMKNKSVITWTTMIAGLALH 289
+ AL +F+ M + +++W ++I G
Sbjct: 196 SVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQ 255
Query: 290 GLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKI 347
G AL+ FS M + + +KP++ T ++LSAC + ++LG++ + +I+++ I +
Sbjct: 256 GYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAV 315
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEA-NAAIWGSLLAASNIYGDVE 396
+I + ++G ++ A +++ + N + SLL GD++
Sbjct: 316 GN--ALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDID 363
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 275/445 (61%), Gaps = 7/445 (1%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L RF + S G YA+++F +P + YNT I+A + P + + +N+++ +++
Sbjct: 45 LFRFA-AVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSI 103
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD +SF F+LK+ + T+ L +IH G +HV ALI +YA ARK
Sbjct: 104 APDEFSFTFLLKS--RSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARK 161
Query: 133 VFDELSLRVW---NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
VF++ ++RV ++ W+ ++ +AK G+L+ AR +F+ M E++V+SWT +++ Y++
Sbjct: 162 VFED-AVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAK 220
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+P+E + LF+ M++ V PDE+ +L+ +SACA+LG E+G +H ++E+ G +V L N
Sbjct: 221 RPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCN 280
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+LIDMY K G + +A QVF+ K KS+ITW M+ A HG +A +F M + V P
Sbjct: 281 SLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVP 340
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ +T +A+L A H G V+ G R F M+ YG+EP+IE YG ++D+LGR+G LQEA L
Sbjct: 341 DGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNL 400
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
L MP +N IWG+LL A I+GDV +GE ++ L++L+P G Y +L +IY GR
Sbjct: 401 LTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRT 460
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIE 454
E+ ++R+ M G +K PGCS++E
Sbjct: 461 AEANEMRQAMLASGARKNPGCSWVE 485
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + S + + + G D A +F + DV + + A + P + L+
Sbjct: 170 GLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLF 229
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + + PD + V+ A +L E+GR +H G V + +LI MY C
Sbjct: 230 QEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKC 289
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
C+ +A +VFD + ++ WN M+ A G +A LFE M V+
Sbjct: 290 GCLEEAWQVFDRTKRK--SLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVV-------- 339
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNT 243
PD + +LA L A A G V+ G + +++ YG+
Sbjct: 340 -----------------------PDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEP 376
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
+ A++DM +SG++ +A + +M S + W ++ +HG
Sbjct: 377 RIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHG 424
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 286/489 (58%), Gaps = 6/489 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+V+ + N +++ + +G D A + F ++ D+ +N+ I Q L A
Sbjct: 207 MVVKDISSWNAMIALHM----QVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRA 262
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +++K ++ S L PD ++ VL A L + +G +IH V TG D V+ ALI
Sbjct: 263 LDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALIS 322
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY+ C + AR++ ++ + + + ++ GY K+GD+N A+ +F+ + +++V++WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWT 382
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q EAI LFR M E +P+ + A LS + L ++ G+ IH +
Sbjct: 383 AMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS 442
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDM 298
G V ++NALI MYAK+G I A + F+ ++ + ++WT+MI LA HG EAL++
Sbjct: 443 GEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M ++P+ IT++ + SAC H GLV GR+YF++MK I P + Y CM+DL G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG LQEA++ + +MP E + WGSLL+A +Y +++LG+ A + L+ LEP NSG Y+
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+Y+ G+W E+ KIRK M+D VKK G S+IEV +VH F D HP + +Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYIT 682
Query: 479 LCKINGQMK 487
+ KI ++K
Sbjct: 683 MKKIWDEIK 691
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 166/308 (53%), Gaps = 37/308 (12%)
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+HC+ + +GL V+++ L+ +Y+ ARK+FDE+ LR WNT+++ YAK
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR--TAFSWNTVLSAYAKR 93
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
GD++++ F+ + +++ +SWTT+I GY + Q ++AI + M E ++P + + L
Sbjct: 94 GDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVL 153
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------------------ 259
++ A +E G+ +H++I + GL V ++N+L++MYAK G
Sbjct: 154 ASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDIS 213
Query: 260 ----------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-A 305
++G+ A+ FE M + ++TW +MI+G G ALDMFS+M R +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDS 273
Query: 306 RVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ P+ T ++LSAC ++ + +G + + +I+ + + I + +I + R G ++
Sbjct: 274 MLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIV--LNALISMYSRCGGVE 331
Query: 365 EAEKLLRR 372
A +L+ +
Sbjct: 332 TARRLIEQ 339
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 202/465 (43%), Gaps = 76/465 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL + +L++ ++ S G++ +A +F + +NT + A + + ++
Sbjct: 40 VIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSS 99
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++++ + D+ S+ ++ + I + + G++ + ++
Sbjct: 100 CEFFDRLP----QRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 121 YASCKCIYDARKVFD---ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
A+ +C+ +KV +L LR NV+V N+++ YAK GD A+ +F+ M K++ S
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLR-GNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISS 214
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENV------------------------------- 206
W +IA + Q+ Q + A+ F +M ++
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSM 274
Query: 207 -KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------ 259
PD + + LSACA L + +GE IH++I G + + NALI MY++ G
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 260 ------------------------KIG---KALQVFENMKNKSVITWTTMIAGLALHGLG 292
K+G +A +F+++K++ V+ WT MI G HGL
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLY 394
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYG 351
EA+++F M +PN T A+LS + + G++ + + +KS G +
Sbjct: 395 GEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS--GEIYSVSVSN 452
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+I + +AG + A + + E + W S++ A +G E
Sbjct: 453 ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
N ++ YAK G + + + F+ + + ++WTTMI G G +A+ + M R ++
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P++ T +L++ +E G++ + + + G+ + ++++ + G A+
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFI-VKLGLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ RM + + + W +++A G ++L + +
Sbjct: 203 VFDRMVVK-DISSWNAMIALHMQVGQMDLAMAQFEQM 238
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/468 (37%), Positives = 277/468 (59%), Gaps = 3/468 (0%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G +YA IF ++ + Y +N+ I+ Q A+ L+ ++Q + ++PD +S
Sbjct: 525 SECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLS 584
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L + V LS + GRE+H V ++ + + L+ MYA C + A KV+D+ +
Sbjct: 585 SMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK 644
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V + N MV+ + G N+A+ LF+ M ++N W +++AGYA E+ F
Sbjct: 645 --DVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE 702
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSG 259
M +++ D + M+ ++ C+ L A+E G+ +H+ I + G +N V L AL+DMY+K G
Sbjct: 703 MLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCG 762
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
I KA VF+NM K++++W MI+G + HG +EAL ++ M + + PNE+TF+AILS
Sbjct: 763 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 822
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLVE G R F M+ Y IE K E Y CM+DLLGRAG L++A++ + +MP E
Sbjct: 823 ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 882
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+ WG+LL A ++ D+++G A Q L +L+P N G Y I+SNIYA GRW E IR++M
Sbjct: 883 STWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMM 942
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ GVKK PG S+IE++ + F AG +HP + +Y L + Q K
Sbjct: 943 KMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSK 990
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 181/392 (46%), Gaps = 40/392 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI G + + +L+++ + + G D YA +F + ++ +NT I A + D+
Sbjct: 97 MISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDY 156
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+ + LY +++ S D ++FP V+KA + + + R++ V GL+ ++ V AL
Sbjct: 157 MEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGAL 216
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ YA + DA DE+ +V WN ++AGY K ++S
Sbjct: 217 VDGYARFGWMDDAVTSLDEIEGT--SVVTWNAVIAGYVK------------------ILS 256
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W EA +F RM V PD +AL C L + + G+ +H+ +
Sbjct: 257 W-------------EEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
G + NALIDMYAK L+VF+ M ++ +TW ++I+ A G +AL
Sbjct: 304 ACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 363
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDL 356
+F RM+ + K N +IL A GL ++G+ R + R + I ++D+
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMAS--AGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ G ++EA ++ R + E N + +LLA
Sbjct: 422 YSKCGMVEEAHQVFRSL-LERNEVSYNALLAG 452
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 36/393 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ N + +D + G+ D A + V +N I + + A ++
Sbjct: 205 GLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIF 264
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + PDN++F L+ L + + G+++H + + G D V ALI MYA C
Sbjct: 265 DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC 324
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
KVFDE+ R N WN++++ A+ G N
Sbjct: 325 DDEESCLKVFDEMGER--NQVTWNSIISAEAQFGHFN----------------------- 359
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+A+ LF RMQ K + + + L A A L + G +H ++ + LN+
Sbjct: 360 --------DALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSD 411
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ L +AL+DMY+K G + +A QVF ++ ++ +++ ++AG G EAL+++ M+
Sbjct: 412 IILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQS 471
Query: 305 AR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
++P++ TF +L+ C + GR+ + R I I ++ + G L
Sbjct: 472 EDGIQPDQFTFTTLLTLCANQRNDNQGRQ-IHAHLIRANITKNIIVETELVHMYSECGRL 530
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
A+++ RM E NA W S++ G+ +
Sbjct: 531 NYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQ 562
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 170/370 (45%), Gaps = 35/370 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G + + + ID + + +F + + +N+ I A Q + +A
Sbjct: 302 LIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDA 361
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++L+ ++Q S + + ++ +L A L+ I GRE+H V L+SD+ + +AL+ M
Sbjct: 362 LVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C G + A +F + E+N +S+
Sbjct: 422 YSKC---------------------------------GMVEEAHQVFRSLLERNEVSYNA 448
Query: 181 LIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
L+AGY Q + EA+ L+ MQ E+ ++PD+ L+ CA G IH ++ +
Sbjct: 449 LLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA 508
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ + + L+ MY++ G++ A ++F M ++ +W +MI G +G +EAL +F
Sbjct: 509 NITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLF 568
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M+ +KP+ + ++LS+C + + GR N + E I Q ++D+ +
Sbjct: 569 KQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV-VLVDMYAK 627
Query: 360 AGYLQEAEKL 369
G + A K+
Sbjct: 628 CGSMDYAWKV 637
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 153/348 (43%), Gaps = 35/348 (10%)
Query: 46 TTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT 105
TTIK + ++ K AS + P YS +++ + ++ + G+ IH Q +
Sbjct: 44 TTIKLKFNGPDSPKPTSIHTK-PASDVNPLPYSS--LIQDCIDSNSFQRGKSIHTQMISN 100
Query: 106 GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARA 165
G + D +++ ++ +YA C+ DL AR
Sbjct: 101 GYNPDAYLMTKILMLYARSGCL------------------------------DDLCYARK 130
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 225
LFE M E+N+ +W T+I YA++D E + L+ RM+ D+ + + AC +
Sbjct: 131 LFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMED 190
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ + + + + GLN + + AL+D YA+ G + A+ + ++ SV+TW +IAG
Sbjct: 191 MGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAG 250
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
EA +F RM + V P+ TF + L C + + G++ + + + G +
Sbjct: 251 YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA-CGFKG 309
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + + K+ M E N W S+++A +G
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMG-ERNQVTWNSIISAEAQFG 356
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/459 (39%), Positives = 273/459 (59%), Gaps = 10/459 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F D+ +NT I Q + A L+ + S +R D +++ ++ A V+
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF---EESPVR-DVFTWTAMVYAYVQ 262
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ R + + S +I YA K + R++F+E+ N+ WN
Sbjct: 263 DGMLDEARRVFDEMPQKREMS----YNVMIAGYAQYKRMDMGRELFEEMPFP--NIGSWN 316
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
M++GY + GDL AR LF++M +++ +SW +IAGYAQ EA+ + M+ +
Sbjct: 317 IMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESL 376
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ ALSACA + A+ELG+ +H + + G + NAL+ MY K G I +A VF
Sbjct: 377 NRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVF 436
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ +++K +++W TM+AG A HG GR+AL +F M A VKP+EIT + +LSAC H GL +
Sbjct: 437 QGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTD 496
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G YF+ M YGI P + Y CMIDLLGRAG L+EA+ L+R MPFE +AA WG+LL A
Sbjct: 497 RGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGA 556
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S I+G++ELGE A + + K+EPHNSG Y +LSN+YA GRW + K+R MR +GV+K P
Sbjct: 557 SRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTP 616
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G S++EV ++H F GD HP+ R+Y L +++ +MK
Sbjct: 617 GYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMK 655
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 167/370 (45%), Gaps = 36/370 (9%)
Query: 73 RPDNYSFPF-----VLKAVVKLSTIELGREIHCQTVGTGLDS----DVHVVAALIQMYAS 123
RP NY P +K +ST R HC D+ + A+I Y
Sbjct: 19 RPTNYPKPHFEDPHTVKCTKAISTHM--RNGHCDLALCVFDAMPLRNSVSYNAMISGYLR 76
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
AR +FD++ + ++ WN M+ GYA+ L +AR LF+ M EK+V+SW +++
Sbjct: 77 NAKFSLARDLFDKMPHK--DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLS 134
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY + +EA +F RM +N I+ L+A + G +E + + L +
Sbjct: 135 GYVRSGHVDEARDVFDRMPHKN----SISWNGLLAAYVRSGRLEEARRLFESKSDWELIS 190
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
N L+ Y K +G A Q+F+ + + +I+W TMI+G A G +A +F E
Sbjct: 191 C----NCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF---E 243
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ V+ + T+ A++ A G+++ RR F+ M + + Y MI + +
Sbjct: 244 ESPVR-DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREM-----SYNVMIAGYAQYKRM 297
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH-NSGNYAILSNI 422
+L MPF N W +++ GD+ ++L + P +S ++A +
Sbjct: 298 DMGRELFEEMPF-PNIGSWNIMISGYCQNGDL----AQARNLFDMMPQRDSVSWAAIIAG 352
Query: 423 YAILGRWNES 432
YA G + E+
Sbjct: 353 YAQNGLYEEA 362
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 270/462 (58%), Gaps = 36/462 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F S DV + I Q D P +A++L ++ L+P+ ++ +LKA
Sbjct: 68 YARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAAS 127
Query: 88 KLSTIEL--GREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ + ++ GR++H + G DS+V+V A++ MYA C
Sbjct: 128 GVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCH-------------------- 167
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
L A+ +F++M KN +SW LIAGYA+ Q ++A LF M EN
Sbjct: 168 -------------HLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLREN 214
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
VKP + L ACA +G++E G+W+H + ++G + + N L+DMYAKSG I A
Sbjct: 215 VKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAK 274
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
+VF+ + + V++W +M+ G + HGLG+ AL F M R R+ PN+ITF+ +L+AC H G
Sbjct: 275 KVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAG 334
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
L++ GR YF++MK +Y +EP+I Y M+DLLGRAG+L A + + MP + AA+WG+L
Sbjct: 335 LLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGAL 393
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L A ++ ++ELG A + + +L+ H G + +L NIYA+ GRWN++ K+RK+M++ GVK
Sbjct: 394 LGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVK 453
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K P CS++E+ VH FVA D +HP ++ + +I+ ++K
Sbjct: 454 KEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIK 495
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 156/263 (59%), Gaps = 7/263 (2%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ + NT++ YAK GDL AR LF+ M+ ++V++WT LI GY+Q D+P +A+ L M
Sbjct: 49 DLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEML 108
Query: 203 VENVKPDEIAMLAALSACAQLGAVEL--GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
+KP++ + + L A + +G+ ++ G +H +YG ++ V ++ A++DMYA+
Sbjct: 109 RIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHH 168
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ +A +F+ M +K+ ++W +IAG A G G +A +FS M R VKP T+ ++L A
Sbjct: 169 LEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCA 228
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C +G +E G ++ + + ++G + ++D+ ++G +++A+K+ R+ + +
Sbjct: 229 CASMGSLEQG-KWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVV 286
Query: 381 IWGSLLAASNIYGDVELGECALQ 403
W S+L + +G LG+ ALQ
Sbjct: 287 SWNSMLTGYSQHG---LGKVALQ 306
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ L R+ N EI L C L + G+ IH + + + N L+++
Sbjct: 1 MELIRQQCKNNAGAREICH-TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNL 59
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
YAK G + A ++F+ M ++ V+TWT +I G + H ++AL + M R +KPN+ T
Sbjct: 60 YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119
Query: 315 IAILSACCHVGLVE-LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
++L A VG + L R + + RYG + + ++D+ R +L+EA+ + M
Sbjct: 120 ASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM 179
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
N W +L+A G + C ++++
Sbjct: 180 -VSKNEVSWNALIAGYARKGQGDKAFCLFSNMLR 212
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 117/286 (40%), Gaps = 34/286 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D N ++ +D + + A IF + +N I + A L+
Sbjct: 148 GYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLF 207
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ + ++P ++++ VL A + ++E G+ +H + G V L+ MYA
Sbjct: 208 SNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKS 267
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I DA+KVFD L+ R +V WN+M+ GY++ G
Sbjct: 268 GSIEDAKKVFDRLAKR--DVVSWNSMLTGYSQHG-------------------------- 299
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
A+ F M + P++I L L+AC+ G ++ G + +++Y +
Sbjct: 300 -----LGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQ 354
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
+ ++D+ ++G + +A+Q M K + W ++ +H
Sbjct: 355 ISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 302/505 (59%), Gaps = 17/505 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G Q N++L+ + S G A +F + P ++N IK ++ +
Sbjct: 50 IVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKS 109
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ ++ + + + +++ F+L A V+ G +IH + + G S+++V LI +
Sbjct: 110 IELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINL 169
Query: 121 YASCK--CIYDARK---VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
YA+ +D ++ +FDE+ NV WN+++AGY + GD + AR +F+ M E+NV
Sbjct: 170 YANGGDGGDFDLKRALYLFDEMPDS--NVVGWNSLLAGYVRRGDFDGARKVFDEMPERNV 227
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+WT ++AG+AQ Q A++LF +M+ V+ D++A++AALSACA+LG + LG+WIH Y
Sbjct: 228 RTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGY 287
Query: 236 IEQY----GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+E+ L +V LNNALI MYA G + A ++FE + ++ ++W+++I G A G
Sbjct: 288 VERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGFAKQGC 347
Query: 292 GREALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
G EA+ +F M + V+P+EITFI L+AC H GL+ G R F M +G+ P+IE
Sbjct: 348 GVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIE 407
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL-IK 407
YGCM+DLL RAG L EA L+ MP + N A+WG+LL+ ++ + E+ +HL +
Sbjct: 408 HYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFE 467
Query: 408 LEPHN--SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
++P+N +G + +L+N+YA GRW ++ +R+ M D+GVKK G S+IE++ + F+ G
Sbjct: 468 IDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVG 527
Query: 466 DTSHPDFDRLYQILCKINGQMKFAE 490
+ +H D + +Y++L I Q + E
Sbjct: 528 EETHKDVNLIYEMLGNITRQTQMGE 552
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 149/321 (46%), Gaps = 26/321 (8%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VLK+ V + + H Q V +G +++ L+ +Y S + A+KVF++++
Sbjct: 33 VLKSCVSFRNLA---KTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAP- 88
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITL 197
+ VWN ++ G+ + + LF+ MT E N +++ L++ + E +
Sbjct: 89 -STTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 198 FRRMQVEN------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
R+ V V+ + I + A G +L ++ + E N + N+L
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYA---NGGDGGDFDLKRALYLFDEMPDSNVVGW--NSL 202
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+ Y + G A +VF+ M ++V TWT M+AG A +G + AL +F +M RA V+ ++
Sbjct: 203 LAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQ 262
Query: 312 ITFIAILSACCHVGLVELGRRYFNIM----KSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+ +A LSAC +G + LG+ + +SR+ + + +I + G + A
Sbjct: 263 VALVAALSACAELGDLTLGKWIHGYVERTWRSRH-LPVLVSLNNALIHMYASCGAMDLAY 321
Query: 368 KLLRRMPFEANAAIWGSLLAA 388
KL +P + N W S++
Sbjct: 322 KLFEEIP-QRNTVSWSSIITG 341
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/491 (36%), Positives = 290/491 (59%), Gaps = 19/491 (3%)
Query: 11 HLLSRFIDSCSSLGFS--DYAYSIFTHKSKPDVYLYNTTIKAL-C-----QTDNPLNAVI 62
+L +R + CS ++ +YA ++F P++ +YN I++ C ++ A++
Sbjct: 55 YLFTRLLYFCSFSNYASFNYANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALM 114
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY ++ + P+N +FPF++K +L +G IH + G +DV V +LI ++
Sbjct: 115 LYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLF 174
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ +ARKVFDE+ +R +V WN+MV GY + G++ A LF M +N+I+W ++
Sbjct: 175 MNFGLSKNARKVFDEMFVR--DVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSI 232
Query: 182 IAGYAQMDQPNEAITLFRRMQV----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
I G Q E++ +F MQ + VKPD+I + + LSACA LG+++ G+W+H Y+
Sbjct: 233 ITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLR 292
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ + V + AL++MY K G + +A+++F +M K WT MI+ ALHG G++A D
Sbjct: 293 KNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFD 352
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F ME+A VKPN +TF+ +LSAC H GLVE GR F++MK Y IEP+I Y CM+D+L
Sbjct: 353 CFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDIL 412
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
RA EA L+R MP + + +WG+LL ++G+++LGE +LI LEPHN Y
Sbjct: 413 SRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYI 472
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVK-KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
L +IY G+++ + +IR M++ G++ K+PGCS IE++ V EF G+ L
Sbjct: 473 NLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGEIP---MKELP 529
Query: 477 QILCKINGQMK 487
+L ++ +MK
Sbjct: 530 LVLDRLRNEMK 540
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 278/469 (59%), Gaps = 7/469 (1%)
Query: 34 THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKL---S 90
T K + + T+I C++ + + A + +++ +A+ P++ +F +L A S
Sbjct: 49 TTKYNDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRS 108
Query: 91 TIELGREIHCQTVGTGLD-SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
+I G IH GLD +DV V ALI MYA C + AR FD++ +R N+ WNT
Sbjct: 109 SISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVR--NLVSWNT 166
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
M+ GY + G +A +F+ + KN ISWT LI G+ + D EA+ FR MQ+ V PD
Sbjct: 167 MIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPD 226
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ ++A ++ACA LG + LG W+H + V ++N+LIDMY++ G I A QVF+
Sbjct: 227 YVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFD 286
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M +++++W ++I G A++GL EAL F+ M+ KP+ +++ L AC H GL+
Sbjct: 287 RMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGE 346
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G R F MK I P+IE YGC++DL RAG L+EA +L+ MP + N I GSLLAA
Sbjct: 347 GLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAAC 406
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
G++ L E + +LI+L+ NY +LSNIYA +G+W+ + K+R+ M++ G++K PG
Sbjct: 407 RTQGNIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPG 466
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSG 498
S IE+ +H+FV+GD SH + D +Y L ++ +++ ++ +FSG
Sbjct: 467 FSSIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQLCGYIP-DFSG 514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 144/355 (40%), Gaps = 81/355 (22%)
Query: 25 FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
F D A +F + + I + D A+ + ++Q S + PD + V+
Sbjct: 177 FED-ALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIA 235
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A L T+ LG +H + ++V V +LI MY+ C CI AR+VFD + R +
Sbjct: 236 ACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRT--L 293
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
WN+++ G+A + G A +EA++ F MQ E
Sbjct: 294 VSWNSIIVGFA--------------------------VNGLA-----DEALSYFNSMQEE 322
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL---NNALIDMYAKSGKI 261
KPD ++ AL AC+ G + G I ++++ + I+P L+D+Y+++G++
Sbjct: 323 GFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKR--VRRILPRIEHYGCLVDLYSRAGRL 380
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+AL V +NM +KPNE+ ++L+AC
Sbjct: 381 EEALNVLKNMP----------------------------------MKPNEVILGSLLAAC 406
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKI---EQYGCMIDLLGRAGYLQEAEKLLRRM 373
G + L N Y IE Y + ++ G A K+ RRM
Sbjct: 407 RTQGNIGLAENVMN-----YLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRM 456
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/460 (37%), Positives = 278/460 (60%), Gaps = 15/460 (3%)
Query: 41 VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS----TIELGR 96
V +N + Q + L++++ + + PD ++ V+ A L R
Sbjct: 225 VVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVR 284
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
+H + + + V AL+ MYA C I AR++FDEL N WN M++ Y +
Sbjct: 285 TLHQKQI----QLNCFVRTALLDMYAKCGSIGAARRIFDELGAYR-NSVTWNAMISAYTR 339
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLA 215
VG+L++AR LF M +NV++W ++IAGYAQ Q AI LF+ M + + PDE+ M++
Sbjct: 340 VGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 399
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
+SAC LGA+ELG W+ ++ + + + +NA+I MY++ G + A +VF+ M +
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 459
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V+++ T+I+G A HG G EA+++ S M+ ++P+ +TFI +L+AC H GL+E GR+ F
Sbjct: 460 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 519
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+K +P I+ Y CM+DLLGR G L++A++ + RMP E +A ++GSLL AS I+ V
Sbjct: 520 SIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 574
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
ELGE A L +LEP NSGN+ +LSNIYA GRW + +IR+ M+ GVKK G S++E
Sbjct: 575 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 634
Query: 456 SKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
++H+F+ D SH D +YQ+L ++ +M+ A ++ ++
Sbjct: 635 GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 674
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 203/442 (45%), Gaps = 79/442 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL-GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I L +N+ ++ I+ C+ L Y + +F P+V+++ + ++ +
Sbjct: 24 IIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAK 83
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V+++ +Q +RPD + +P ++K S G H + G SD V A+I
Sbjct: 84 VVLMFEHMQGCGVRPDAFVYPILIK-----SAGNGGIGFHAHVLKLGHGSDAFVRNAVID 138
Query: 120 MYASCKCIYDARKVFDEL-----SLRVWN--------------------------VAVWN 148
MYA I ARKVFDE+ + WN V W
Sbjct: 139 MYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWT 198
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
MV GYAKV DL AR F+ M E++V+SW +++GYAQ E + LF M ++P
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEP 258
Query: 209 DEIAMLAALSACAQLG----AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
DE + +SAC+ G A L +H +Q LN V AL+DMYAK G IG A
Sbjct: 259 DETTWVTVISACSSRGDPCLAASLVRTLHQ--KQIQLNCFV--RTALLDMYAKCGSIGAA 314
Query: 265 LQVFE--------------------------------NMKNKSVITWTTMIAGLALHGLG 292
++F+ M ++V+TW +MIAG A +G
Sbjct: 315 RRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQS 374
Query: 293 REALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
A+++F M A ++ P+E+T ++++SAC H+G +ELG + I+ I +
Sbjct: 375 AMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ-IKLSISGHN 433
Query: 352 CMIDLLGRAGYLQEAEKLLRRM 373
MI + R G +++A+++ + M
Sbjct: 434 AMIFMYSRCGSMEDAKRVFQEM 455
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 14/177 (7%)
Query: 2 IVRGLDQNNHLLS-----RFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
+VR L +N LS I S G + A +F + DV YNT I +
Sbjct: 416 VVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGH 475
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ A+ L + ++ + PD +F VL A +E GR++ +D A
Sbjct: 476 GVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDH----YAC 531
Query: 117 LIQMYASCKCIYDARKVFDELSLR----VWNVAVWNTMVAGYAKVGDLNNARALFEL 169
++ + + DA++ + + + V+ + + + ++G+L A LFEL
Sbjct: 532 MVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGEL-AANKLFEL 587
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 276/471 (58%), Gaps = 6/471 (1%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N + + I +C++ +A IF P+V+ +N IKA +A+ +N+ +
Sbjct: 45 NLIAVKLIGACAANANLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLS 104
Query: 70 --SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
SA P+ Y + ++KA L I G ++H + +GLD+++H+ +L+ MY +
Sbjct: 105 LPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREP 164
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
A +VFDE+ LR +V WNTMV+GY GDL +AR +F+ M E++VISW +I GY Q
Sbjct: 165 ASAGQVFDEMPLR--DVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQ 222
Query: 188 MDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ ++AI +F MQ V V PD++ +++ LSACA +GA++ G WI ++ G +
Sbjct: 223 NGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLY 282
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L NALIDMYAK G + +A ++F+ M+ + VI+W+TMI G HG EA +S+M
Sbjct: 283 LGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECG 342
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
VKPNE+TF+ +LSAC H GLV+ G F+ M Y I PK+ YGC+IDLL RAG L EA
Sbjct: 343 VKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEA 402
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
E L+ MP E N +WG+LL I+ D GE QHL++L+ +G+Y ++ A +
Sbjct: 403 EDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASV 462
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFD-RLY 476
GR +++ M+ G+ K PGCS IEV VHEF D + D RL+
Sbjct: 463 GRVDDAANCWLRMQHKGIIKDPGCSKIEVHNTVHEFKECDNTSSGKDIRLF 513
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 130/323 (40%), Gaps = 67/323 (20%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALC-------- 52
+I GLD N HL + +D A +F DV +NT + C
Sbjct: 139 VIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESA 198
Query: 53 -----------------------QTDNPLNAVILYNKIQ-ASALRPDNYSFPFVLKAVVK 88
Q +A+ +++++Q + PD+ + VL A
Sbjct: 199 RRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAH 258
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ ++ GR I G ++++ ALI MYA C + +AR++FD + R +V W+
Sbjct: 259 VGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRER--DVISWS 316
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ G GD +EA + +M VKP
Sbjct: 317 TMICGSGTHGD-------------------------------ADEAFGYYSKMLECGVKP 345
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+E+ + LSAC+ G V+ G E I++Y + V +ID+ +++G++ +A +
Sbjct: 346 NEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDL 405
Query: 268 FENMK-NKSVITWTTMIAGLALH 289
+M +VI W ++ G +H
Sbjct: 406 INSMPIEPNVIVWGALLGGCRIH 428
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/544 (35%), Positives = 298/544 (54%), Gaps = 68/544 (12%)
Query: 1 MIVRGLDQNNHLLSRF-IDSCSSLGFSDYAYSIFTHK-SKPDVYLYNTTIKALCQTDNPL 58
M+ ++ N + ++F + S S++G YA +F + + D +L N+ IKA +T
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIG-YARKLFDQRPQRDDSFLSNSMIKAYLETRQYP 59
Query: 59 NAVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++ LY + + + PDN++F + K+ + G ++H Q G +D++V +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 118 IQMYASCKCIYDARKVFDELSLR------------------------------VWNVAVW 147
+ MYA + AR FDE+ R V +V ++
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 148 NTMVAGYAKVGDLNNARALFELMT-------------------------------EKNVI 176
N M+ G+ K GD+ +AR LF+ MT E+N++
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
SW T+I GY Q QP E ITLF+ MQ ++ PD++ +L+ L A + GA+ LGEW H +
Sbjct: 240 SWNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+++ L+ V + A++DMY+K G+I KA ++F+ M K V +W MI G AL+G R A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
LD+F M KP+EIT +A+++AC H GLVE GR++F++M+ G+ KIE YGCM+D
Sbjct: 360 LDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVD 417
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EAE L+ MPFE N I S L+A Y D+E E L+ ++LEP N GN
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L N+YA RW++ G ++ VMR KK GCS IE++ V EF++GDT+HP +
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI 537
Query: 476 YQIL 479
+ +L
Sbjct: 538 HLVL 541
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/550 (36%), Positives = 306/550 (55%), Gaps = 47/550 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I+ GL L + I C+ G YA +F +P+ ++YN+ I+ +D+P+
Sbjct: 137 IILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPI 196
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+AV+L+ ++ S L P+ ++ PFVLKA S +H + G+ S V V ALI
Sbjct: 197 DAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALI 256
Query: 119 QMYASCKCIYDARKVFDELS---LRVWN-----------VAVWNTMVAGYAKVGDLNNAR 164
+Y C I+ ARK+FD+++ L WN + V N + YAK G+L++A+
Sbjct: 257 AVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQ 316
Query: 165 ALFELMTEKNVISWTTLIAGYAQMD-------------------------------QPNE 193
A+F+ EKNV+SWT++I+ YAQ Q E
Sbjct: 317 AIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYRE 376
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
A+ LF +M+ V PDE +++ L+AC+QLG + +G+ IHNYI V L N+LID
Sbjct: 377 ALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLID 436
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G + AL +F M K++++W +I LALHG G EA+ +F M+ P+EIT
Sbjct: 437 MYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEIT 496
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+LSAC H GLV++G YF+ M Y + +IE Y CM+DLLGR G L EA +L+ RM
Sbjct: 497 LTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLGRGGLLGEAIELIGRM 556
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P + + +WG+LL A I+G+VE+G+ L+ L++LEPH+ G Y ++SNIY RW +
Sbjct: 557 PMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVK 616
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
KIRK+M D G+KK S IE+ ++EF+ D H +Y +L ++ ++ A +L
Sbjct: 617 KIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYLC 676
Query: 494 NEFSGVLESD 503
N S E++
Sbjct: 677 NISSVFFEAE 686
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 294/538 (54%), Gaps = 56/538 (10%)
Query: 1 MIVRGLDQNNHLLSRFI--------DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALC 52
MIV G N L + + ++ + YA +F +PD +++NT I+
Sbjct: 24 MIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDTFMWNTYIRGSS 83
Query: 53 QTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH 112
Q+ +P++AV LY ++ +++PDN++FP VLKA KL + G +H + G S+V
Sbjct: 84 QSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRLGFGSNVV 143
Query: 113 VVAALIQMYASC------KCIYD-------------------------ARKVFDELSLRV 141
V L+ +A C I+D ARK+FDE+ R
Sbjct: 144 VRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKR- 202
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++ WN M+ Y K G++ AR LF+ K+V+SW ++ GY + EA+ LF M
Sbjct: 203 -DLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLNQEALELFDEM 261
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG---LNTIVPLNNALIDMYAKS 258
PDE+ ML+ LSACA LG + GE +H I + L+T+ L NAL+DMYAK
Sbjct: 262 CEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKLSTL--LGNALVDMYAKC 317
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G IGK + VF +++K +++W ++I GLA HG E+L +F M+R +V P+EITF+ +L
Sbjct: 318 GNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGVL 377
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+AC H G V+ G RYF +MK++Y IEP I GC++D+L RAG L+EA + M E N
Sbjct: 378 AACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMKIEPN 437
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
A +W SLL A ++GDVEL + A + L+++ SG+Y +LSN+YA G W+ + +RK+
Sbjct: 438 AIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWDGAENVRKL 497
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
M D GV K G S++E + R+ +P R C + G ++ A+ + E
Sbjct: 498 MDDNGVTKTRGSSFVE-AYRIE-------PNPVNGRTLLGACIVYGDVELAKRVNEEL 547
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 60/283 (21%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N +V YAK G++ +F L+ +K+++SW ++I G A E++ LFR MQ V
Sbjct: 308 NALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVC 367
Query: 208 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
PDEI + L+AC+ G V+ G + + +Y + + ++DM A++G
Sbjct: 368 PDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAG------- 420
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
L +EA D + M +++PN I + ++L AC G
Sbjct: 421 ------------------------LLKEAFDFIASM---KIEPNAIVWRSLLGACKVHGD 453
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYG---CMIDLLGRAGYLQEAEKLLRRMP--------- 374
VEL +R + + +++Q G + ++ G AE + + M
Sbjct: 454 VELAKRATEQL-----LRMRVDQSGDYVLLSNVYASHGEWDGAENVRKLMDDNGVTKTRG 508
Query: 375 --------FEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
E N +LL A +YGDVEL + + L++L
Sbjct: 509 SSFVEAYRIEPNPVNGRTLLGACIVYGDVELAKRVNEELLRLR 551
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 275/449 (61%), Gaps = 5/449 (1%)
Query: 34 THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV--KLST 91
TH + + ++I C+ A ++++Q + +RP++ +F +L A L
Sbjct: 47 THSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEG 106
Query: 92 IELGREIHCQTVGTGLDSD-VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
+ G IH GLD++ V V AL+ MY+ C + A +FDE+ +R N WNTM
Sbjct: 107 LRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR--NSVSWNTM 164
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+ G + G++ A LF+ M+E++ ISWT++I G+ + +A+ FR MQ+ V+PD
Sbjct: 165 IDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDY 224
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ +++ L+ACA LGA+ LG WI+ ++ + + ++N+LIDMY++ G I A QVFE
Sbjct: 225 VTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQ 284
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M +S+++W +MI G AL+G EAL+ F+ M + +P+ ++F L+AC H GLV+ G
Sbjct: 285 MPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEG 344
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
++F+IMK I P+IE YGC++DL RAG L++A ++ MP + N + GSLLAA
Sbjct: 345 LQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACR 404
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
+GDV L E +++L +++P + NY +LSNIYA +GRW+ + K+RK M+ +G+ K PG
Sbjct: 405 THGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGF 464
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
S IE+ +HEFVAGD +H + +Y +L
Sbjct: 465 SSIEMDGSIHEFVAGDKTHVETQNIYAML 493
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 148/368 (40%), Gaps = 90/368 (24%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
ID C G A +F S+ D + + I + A+ + ++Q + + PD
Sbjct: 165 IDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDY 224
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ VL A L + LG I+ + ++ + +LI MY+ C CI AR+VF++
Sbjct: 225 VTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQ 284
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R ++ WN+M+ G+A + G+A+ EA+
Sbjct: 285 MPKR--SLVSWNSMIVGFA--------------------------LNGHAE-----EALE 311
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELG----------EWIHNYIEQYGLNTIVP 246
F M+ E +PD ++ AL+AC+ G V+ G I IE YG
Sbjct: 312 FFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYG------ 365
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L+D+Y+++G++ AL V NM
Sbjct: 366 ---CLVDLYSRAGRLEDALNVIANMP---------------------------------- 388
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ-YGCMIDLLGRAGYLQE 365
+KPNE+ ++L+AC G V L R +MK ++P + Y + ++ G
Sbjct: 389 MKPNEVVLGSLLAACRTHGDVGLAER---LMKYLCEVDPGSDSNYVLLSNIYAAVGRWDG 445
Query: 366 AEKLLRRM 373
A K+ ++M
Sbjct: 446 ASKVRKKM 453
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 278/442 (62%), Gaps = 7/442 (1%)
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
I + ++ S P+ Y+F FV KA + G +I + GL+S++ V A+I+MY
Sbjct: 18 IFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMY 77
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A+ + +AR+VFD SL ++ WN M+ GY G++ A+ +F+ M+E++V+SWTT+
Sbjct: 78 ANWGLVDEARRVFD-WSLDQ-DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTI 135
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
IAGY Q+ EA+ LF M P+E + +AL+ACA L A++ G WIH YI++ +
Sbjct: 136 IAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEI 195
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFEN---MKNKSVITWTTMIAGLALHGLGREALDM 298
L +L+DMYAK G+I A +VF + +K K V W MI G A+HG +EA+D+
Sbjct: 196 KMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEAIDL 254
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M+ +V PN++TF+A+L+AC H LVE GR YF M S YGIEP+IE YGCM+DLLG
Sbjct: 255 FEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLG 314
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R+G L+EAE+ + MP +A IWG+LL A I+ D+E G+ + + +L+ + G + +
Sbjct: 315 RSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVL 374
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+Y+ G+W+E+ +R+ + G KK PGCS IE++ H+F+ GD SHP +LY
Sbjct: 375 LANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLF 434
Query: 479 LCKINGQMKFAEHLQNEFSGVL 500
L ++ ++K A ++ EF VL
Sbjct: 435 LDEMTTKLKNAGYVP-EFGEVL 455
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 126/321 (39%), Gaps = 70/321 (21%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYN------------------- 45
GL+ N + + I ++ G D A +F D+Y +N
Sbjct: 62 GLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMF 121
Query: 46 ------------TTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE 93
T I Q A+ L++++ + P+ ++ L A L ++
Sbjct: 122 DEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALD 181
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE---LSLRVWNVAVWNTM 150
GR IH + + + ++A+L+ MYA C I A KVF + L L+VW WN M
Sbjct: 182 QGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWP---WNAM 238
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+ GYA G + EAI LF +M+VE V P++
Sbjct: 239 IGGYAMHG-------------------------------KSKEAIDLFEQMKVEKVSPNK 267
Query: 211 IAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ +A L+AC+ VE G + + YG+ + ++D+ +SG + +A +
Sbjct: 268 VTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVF 327
Query: 270 NMKNKSVIT-WTTMIAGLALH 289
NM T W ++ +H
Sbjct: 328 NMPMAPDATIWGALLGACRIH 348
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/458 (40%), Positives = 262/458 (57%), Gaps = 34/458 (7%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F K +++L+N I+ AV LY ++ L PDN++FPFVLKA LS
Sbjct: 132 LFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA 191
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
IE GREIH V TG + DV V AALI MYA C C+ AR+VFD++ +R + +WN+M+
Sbjct: 192 IEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR--DAVLWNSML 249
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
A Y++ G P+ ++L M + ++P E
Sbjct: 250 AAYSQNG-------------------------------HPDACLSLCSEMVLTGLRPTEA 278
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
++ A+SA A A+ G +H + + + AL+DMYAK G + A +FE +
Sbjct: 279 TLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERL 338
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K V++W MI G A+HG EALD+F M R KP+ ITF+ +LSAC H GL+E G
Sbjct: 339 GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGW 397
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
+F M Y I+P ++ Y CM+DLLG +G L EA L+ +M ++ +WG+LL + I
Sbjct: 398 MFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKI 457
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+ +VELGE AL+ LI+LEP ++GNY ILSNIYA G+W K+RK+M D +KK CS
Sbjct: 458 HANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACS 517
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+IEV +VH F++GDTSHP D +Y L ++ G MK A
Sbjct: 518 WIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEA 555
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 152/357 (42%), Gaps = 43/357 (12%)
Query: 37 SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR 96
S P T +KA+ NP +++ L P ++ +L++ + I+ G+
Sbjct: 44 SAPQFDNNQTHLKAIPSCSNP--------HAESTCLTPTYSNYASLLQSCIARKAIKPGK 95
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
++H Q G D + L+ +Y C+ D+
Sbjct: 96 QLHAQVCLAGFGFDTVIATKLVNLY----CVCDS-------------------------- 125
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
L++AR LF+ + + N+ W LI GYA A+ L+ +M + PD
Sbjct: 126 ---LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFV 182
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L ACA L A+E G IH ++ Q G V + ALIDMYAK G +G A +VF+ + +
Sbjct: 183 LKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDA 242
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+ W +M+A + +G L + S M ++P E T + +SA + GR +
Sbjct: 243 VLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRE-LHG 301
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ R E + ++D+ + G ++ A L R+ + W +++ ++G
Sbjct: 302 LSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMHG 357
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G +++ + + ID + G A +F D L+N+ + A Q +P
Sbjct: 202 VVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDAC 261
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L +++ + LRP + + A + + GRE+H + +S V AL+ M
Sbjct: 262 LSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDM 321
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + AR +F+ L ++ V WN M+ GYA G A LFE E N ++
Sbjct: 322 YAKCGSVRVARNLFERLGVK--RVVSWNAMITGYAMHGHATEALDLFE---EMNRVA--- 373
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI--HNYIEQ 238
KPD I + LSAC+ G +E G W+ I
Sbjct: 374 --------------------------KPDHITFVGVLSACSHGGLLEEG-WMFFETMIRD 406
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHG---LGRE 294
Y ++ V ++D+ SG++ +A + MK W ++ +H LG
Sbjct: 407 YKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEI 466
Query: 295 ALDMFSRMERARVKPNEITFIAILS 319
AL+ +E P++ ILS
Sbjct: 467 ALERLIELE-----PDDAGNYVILS 486
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 285/497 (57%), Gaps = 46/497 (9%)
Query: 5 GLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL + ++S+ I S S LG YA +IF + + ++ NT I+A ++ P+ A+
Sbjct: 139 GLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAMDNPFVCNTMIRAYAKSVFPIKAIY 198
Query: 63 LYNKIQASALRPDNYSFPFVLKAV----------VKLSTIEL---GREIHCQTVGTGLDS 109
LYN + ++ D++++PF LKA +K + +++ G EIHC+ GLD
Sbjct: 199 LYNFMHRKDIKSDHFTYPFGLKACARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQ 258
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRV---WNVAV-------------------- 146
D + +L+ +Y+ C + AR VFDE++ + WNV +
Sbjct: 259 DCFIQNSLVYLYSQCGFLDLARCVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMP 318
Query: 147 ------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
WN ++A Y ++G + +A+ +F+ M E++ +SW ++IAGY Q+ A+ LFR
Sbjct: 319 GKNVVSWNMLIARYIRLGKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFRE 378
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M++ NV+ +I +++ L ACA+ GA+E+G IH ++Q L+NAL+DMYAK G
Sbjct: 379 MEIANVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGH 438
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAIL 318
+ A +VF +K K + W MI LA+HG EAL +FS ME + +PN +TFI +L
Sbjct: 439 LNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVL 498
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
AC H GLV+ GR +FN M + Y I P I+ YGCM+DLL R G L+EA +++ MPFEAN
Sbjct: 499 IACSHKGLVDEGRTFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEAN 558
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ +W +LL A ++ V+L E + Q L K+EP G+Y +LSNIYA RWN+ ++R
Sbjct: 559 SVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSE 618
Query: 439 MRDMGVKKMPGCSYIEV 455
M GV K PG S+I +
Sbjct: 619 MIGSGVPKKPGSSHIGI 635
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/548 (34%), Positives = 285/548 (52%), Gaps = 71/548 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G YA +F P + N+ I+ + P A++ Y + L PD ++FP +
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVV----------------------------- 114
K+ L G+++HC + G SD ++
Sbjct: 148 KSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 204
Query: 115 --AALIQMYASCKCIYDARKVFDEL---SLRVWNVAVWNTMVAG---------------- 153
A +I YA ++A K+F + S++ + + N + A
Sbjct: 205 SWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI 264
Query: 154 ------------------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
Y K G AR LF M EKN+ W +I G+ + EA+
Sbjct: 265 DETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEAL 324
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+LF MQ+ VK D++ M + L AC LGA+ELG+W+H YIE+ + V L AL+DMY
Sbjct: 325 SLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMY 384
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G I A++VF+ M K V+TWT +I GLA+ G G +AL++F M+ + VKP+ ITF+
Sbjct: 385 AKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFV 444
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L+AC H GLV G YFN M ++YGI+P IE YGCM+D+LGRAG + EAE L++ MP
Sbjct: 445 GVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 504
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ + LL+A I+G++ + E A Q LI+L+P N G Y +LSNIY+ + W + K+
Sbjct: 505 APDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKM 564
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
R++M + +KK PGCS IEV VHEFV GD SHP +Y+ L + ++K A ++ ++
Sbjct: 565 RELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDK 624
Query: 496 FSGVLESD 503
+ + D
Sbjct: 625 SEVLFDMD 632
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 272/461 (59%), Gaps = 6/461 (1%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P++ +N + ++ AVI++ K+ PD + VL +V + +GR+
Sbjct: 214 EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQ 273
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
IH + GL D V++A++ MY +Y K+FDE + V N + G ++
Sbjct: 274 IHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMM--ETGVCNAYITGLSRN 331
Query: 158 GDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
G ++ A +F L E+ NV+SWT++IAG AQ + EA+ LFR MQV VKP+ + +
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
+ L AC + A+ G H + + L V + +ALIDMYAK G+I + VF M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT 451
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
K+++ W +++ G ++HG +E + +F + R R+KP+ I+F ++LSAC VGL + G +Y
Sbjct: 452 KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
FN+M YGI+P++E Y CM++LLGRAG LQEA L++ +PFE ++ +WG+LL + +
Sbjct: 512 FNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQN 571
Query: 394 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
+V+L E A Q L LEP N G Y ++SNIYA G W E IR M +G+KK PGCS+I
Sbjct: 572 NVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 454 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
+V +V+ +A D SHP D++ + + +I+ +M+ + H N
Sbjct: 632 QVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPN 672
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 207/431 (48%), Gaps = 43/431 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++ ++ I S S+ + A I P VY +++ I AL + ++ ++
Sbjct: 45 GAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVF 104
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + L PD + P + K +LS + G++IHC +GLD D V +L MY C
Sbjct: 105 SRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRC 164
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVISWTT 180
+ DARKVFD +S + +V + ++ GYA+ G L + M E N++SW
Sbjct: 165 GRMGDARKVFDRMSEK--DVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNG 222
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+++G+ + EA+ +F++M PD++ + + L + + +G IH Y+ + G
Sbjct: 223 ILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQG 282
Query: 241 LNTIVPLNNALIDMYAKSGK-------------------------------IGKALQVFE 269
L + +A++DMY KSG + KAL++F
Sbjct: 283 LLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFG 342
Query: 270 NMKNK----SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
K + +V++WT++IAG A +G EAL++F M+ A VKPN +T ++L AC ++
Sbjct: 343 LFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIA 402
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ GR R + + +ID+ + G ++ ++ + MP + N W SL
Sbjct: 403 ALGHGRSTHGF-AVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK-NLVCWNSL 460
Query: 386 LAASNIYGDVE 396
+ +++G +
Sbjct: 461 MNGYSMHGKAK 471
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 16 FIDSCSSLGFSDYAYSIF----THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+I S G D A +F K + +V + + I Q + A+ L+ ++Q +
Sbjct: 324 YITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
++P+ + P +L A ++ + GR H V L DVHV +ALI MYA C I ++
Sbjct: 384 VKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQ 443
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF+ + + N+ WN+++ GY+ G +
Sbjct: 444 IVFNMMPTK--NLVCWNSLMNGYSMHG-------------------------------KA 470
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNA 250
E +++F + +KPD I+ + LSAC Q+G + G ++ + E+YG+ + +
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSC 530
Query: 251 LIDMYAKSGKIGKALQVFENM 271
++++ ++GK+ +A + + +
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEI 551
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 277/486 (56%), Gaps = 9/486 (1%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S +D S G A F + ++ +N+ I Q A+ ++ + + +
Sbjct: 190 SALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVE 249
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARK 132
PD + V+ A S I G +IH + V +D+ + AL+ MYA C+ + +AR
Sbjct: 250 PDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARL 309
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD + LR NV +MV GYA+ + AR +F M EKNV+SW LIAGY Q +
Sbjct: 310 VFDRMPLR--NVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENE 367
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVP 246
EA+ LF ++ E++ P L+ACA L ++LG H I ++G + +
Sbjct: 368 EAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIF 427
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G + VFE M + V++W MI G A +G G AL++F +M +
Sbjct: 428 VGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSG 487
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+ +T I +LSAC H GLVE GRRYF+ M++ G+ P + + CM+DLLGRAG L EA
Sbjct: 488 QKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEA 547
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
L++ MP + + +WGSLLAA ++G++ELG+ + L++++P NSG Y +LSN+YA L
Sbjct: 548 NDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAEL 607
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW + ++RK MR GV K PGCS+IE+ RVH F+ D HP ++ +L + QM
Sbjct: 608 GRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQM 667
Query: 487 KFAEHL 492
K+A ++
Sbjct: 668 KWAGYV 673
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 2/301 (0%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D+ F +L + V+ + R IH + + T S++ + L+ Y C DARKVF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
D + R N +N +++ K G L+ A +F+ M E + SW +++G+AQ D+ EA
Sbjct: 78 DRMPQR--NTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEA 135
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ F M E+ +E + +ALSACA L + +G IH I + V + +AL+DM
Sbjct: 136 LRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDM 195
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
Y+K G + A + F+ M +++++W ++I +G +AL++F M V+P+EIT
Sbjct: 196 YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITL 255
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+++SAC + G + + R + ++D+ + + EA + RMP
Sbjct: 256 ASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Query: 375 F 375
Sbjct: 316 L 316
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 182/412 (44%), Gaps = 73/412 (17%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ G D A+++F +PD +N + Q D A+ + + + + YSF
Sbjct: 96 TKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFG 155
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
L A L+ + +G +IH + DV++ +AL+ MY+ C + A++ FD +++R
Sbjct: 156 SALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVR 215
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N+ WN+++ Y + G A +F +M +
Sbjct: 216 --NIVSWNSLITCYEQNGPAGKALEVFVMMMDN--------------------------- 246
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSG 259
V+PDEI + + +SACA A+ G IH +++ + L NAL+DMYAK
Sbjct: 247 ----GVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCR 302
Query: 260 KIGKALQVFE-------------------------------NMKNKSVITWTTMIAGLAL 288
++ +A VF+ NM K+V++W +IAG
Sbjct: 303 RVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQ 362
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRY----GI 343
+G EA+ +F ++R + P TF +L+AC ++ ++LGR+ + I+K + G
Sbjct: 363 NGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGE 422
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 393
E I +ID+ + G +++ + RM E + W +++ A N YG
Sbjct: 423 ESDIFVGNSLIDMYMKCGMVEDGCLVFERM-VERDVVSWNAMIVGYAQNGYG 473
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 285/529 (53%), Gaps = 65/529 (12%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA+S+F +P + +N IK + +A+ L+ K+ + PD+++ P VLK
Sbjct: 67 YAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCA 125
Query: 88 KLSTIELGREIHCQTVGTGL-------------------------------DSDVHVVAA 116
+L ++ G++IH + G D DV +
Sbjct: 126 RLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNS 185
Query: 117 LIQMYASCKCIY-------------------------------DARKVFDELSLRVWNVA 145
LI YA C I AR VFD + +R N
Sbjct: 186 LIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIR--NSV 243
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WN M+ GY K GD N A+ LF+ M E+++++W ++I GY + Q +A+ LF M E+
Sbjct: 244 SWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRED 303
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+ P+ +L A+SA + + ++ G W+H+YI + G T L LI+MY+K G + AL
Sbjct: 304 ISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSAL 363
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
+VF ++ K + WT++I GL +HGL + L++F M R +KP+ ITFI +L+AC H G
Sbjct: 364 RVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAG 423
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
E RYF +M YGI+P IE YGC+ID+L RAG+L+EA+ + RMP +AN IW SL
Sbjct: 424 FAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSL 483
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L+ S +G++ +GE A QHLI L P +G Y ILSN+YA G W + ++R++M+ G+K
Sbjct: 484 LSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMK 543
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
K PGCS IE +HEF+ GD SHP + +Y LC++ ++ A H+ +
Sbjct: 544 KDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPD 592
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 13/246 (5%)
Query: 145 AVWNTMVAGYA--KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V + ++A YA ++ +L A +LF+ + E ++SW LI Y + + N+AI LF ++
Sbjct: 48 SVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL 107
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ V PD + L CA+LGA++ G+ IH + + G + ++L+ MY+K G+I
Sbjct: 108 CDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIE 166
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+VF+ M++K V++W ++I G A G AL+MF M + + ++ ++
Sbjct: 167 LCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP----EKDSFSWTILIDGLS 222
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
G +E R F+ M R + + MI+ +AG A++L +MP E + W
Sbjct: 223 KSGKLEAARDVFDRMPIRNSV-----SWNAMINGYMKAGDSNTAKELFDQMP-ERSLVTW 276
Query: 383 GSLLAA 388
S++
Sbjct: 277 NSMITG 282
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 108/272 (39%), Gaps = 41/272 (15%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G S+ A +F + + +N+ I + A+ L+ + + P+ + +
Sbjct: 256 GDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAV 315
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + ++ GR +H V +G +D + LI+MY+ C
Sbjct: 316 SAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC------------------- 356
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
G + +A +F + +K + WT++I G + + LF M
Sbjct: 357 --------------GSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCR 402
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE----QYGLNTIVPLNNALIDMYAKSG 259
+KP I + L+AC+ G E H Y + YG+ + LID+ ++G
Sbjct: 403 TGLKPHAITFIGVLNACSHAG---FAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAG 459
Query: 260 KIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
+ +A E M K+ + WT++++G HG
Sbjct: 460 HLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 278/465 (59%), Gaps = 7/465 (1%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N I ++ + L+AV+++ + L+PD S VL AV L +G +IHC +
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
GL D VV+ALI MY C C + VF+E+ +V N +V G ++ G ++NA
Sbjct: 238 KQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMD--EVDVGACNALVTGLSRNGLVDNA 295
Query: 164 RALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 221
+F+ + NV+SWT++IA +Q + EA+ LFR MQ+E VKP+ + + L AC
Sbjct: 296 LEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACG 355
Query: 222 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 281
+ A+ G+ H + + G+ V + +ALIDMYAK G++ + F+ M N+++++W +
Sbjct: 356 NIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNS 415
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
++AG A+HG EA+++F M+R KP+ ++F +LSAC GL E G YF+ M +
Sbjct: 416 LMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNH 475
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 401
G+E ++E Y CM+ LLGR+G L+EA ++++MPFE ++ +WG+LL++ ++ V+LGE A
Sbjct: 476 GVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIA 535
Query: 402 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 461
+ + +LEP N GNY +LSNIYA W E +R +MR G+KK PG S+IE+ +VH
Sbjct: 536 AKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHM 595
Query: 462 FVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 503
+AGD+SHP ++ + L K+ +MK + H V E D
Sbjct: 596 LLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQD 640
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 41/384 (10%)
Query: 47 TIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG 106
TI+ + ++ + + +++ + + PD+ P V+K LS ++ G+++HC + +G
Sbjct: 45 TIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSG 104
Query: 107 LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARAL 166
L D V+++L+ MY + DAR VFD+L V + +++ +A+ G + + L
Sbjct: 105 LGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQP--GVVTSSALISRFARKGRVKETKEL 162
Query: 167 F----ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
F +L E N++SW +I+G+ + +A+ +F+ M +E +KPD ++ + L A
Sbjct: 163 FYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGD 222
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------------------- 257
L +G IH Y+ + GL + +ALIDMY K
Sbjct: 223 LDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNAL 282
Query: 258 ------SGKIGKALQVFENMK--NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+G + AL+VF+ K + +V++WT+MIA + +G EAL++F M+ VKP
Sbjct: 283 VTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKP 342
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
N +T +L AC ++ + G+ + R GI + +ID+ + G + +
Sbjct: 343 NSVTIPCLLPACGNIAALLHGKAA-HCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLC 401
Query: 370 LRRMPFEANAAIWGSLLAASNIYG 393
MP N W SL+A ++G
Sbjct: 402 FDMMP-NRNLVSWNSLMAGYAMHG 424
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 37/270 (13%)
Query: 24 GFSDYAYSIFTHKSKPD--VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
G D A +F D V + + I + Q + A+ L+ ++Q ++P++ + P
Sbjct: 290 GLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPC 349
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L A ++ + G+ HC ++ G+ +DV+V +ALI MYA C + +R FD + R
Sbjct: 350 LLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNR- 408
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
N+ WN+++AGYA G FE AI +F M
Sbjct: 409 -NLVSWNSLMAGYAMHGK------TFE-------------------------AINIFELM 436
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGK 260
Q KPD ++ LSAC Q G E G + + + + +G+ + + ++ + +SG+
Sbjct: 437 QRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGR 496
Query: 261 IGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ +A + + M W +++ +H
Sbjct: 497 LEEAYAMIKQMPFEPDSCVWGALLSSCRVH 526
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
K IS I +++++ I +F M + + PD + + CA L A++ G+ +
Sbjct: 37 KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96
Query: 233 HNY--IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
H + + GL+++V ++L+ MY + + A VF+ + V+T + +I+ A G
Sbjct: 97 HCFALVSGLGLDSVVL--SSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKG 154
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSA 320
+E ++F + V+ N +++ ++S
Sbjct: 155 RVKETKELFYQTRDLGVELNLVSWNGMISG 184
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 287/512 (56%), Gaps = 43/512 (8%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L R +C G A IF + +V +N I++ +A+++Y +
Sbjct: 60 LMRVYAACGEPGL---ARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGF 116
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD Y++P VLKA + ++ +G +IH + GLD +++V LI MY CK + +A++
Sbjct: 117 VPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQ 176
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNA----------------------------- 163
V DE+ R +V WN+MV+ YA+ G N+A
Sbjct: 177 VLDEIPCR--DVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT 234
Query: 164 --------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+ +F +T+K+VISW +IA Y P EA+ L+ +M+ V+PD +++++
Sbjct: 235 TSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVS 294
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L A L A+ LG +H + E+ L + L NALIDMYAK G + A VF M+ +
Sbjct: 295 VLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRD 354
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V++WT++I+ G GR+A+ +F+ M + + P+ I F+++L+AC H GL++ GR YFN
Sbjct: 355 VVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFN 414
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+M + GI PK+E + C++DLLGRAG + EA +R+MP E + +WG LL+A +Y ++
Sbjct: 415 LM-AECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNM 473
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
+G A L+ L P +SG Y +LSNIYA GRW + IR +M G+KK+PG S +E+
Sbjct: 474 NIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVEL 533
Query: 456 SKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ VH F+AGD SHP ++Y+ L + G+MK
Sbjct: 534 NDGVHTFLAGDHSHPQSKKIYEELDVLVGKMK 565
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
KV ++ LR WN +V ++ YA G+ AR +F+ +T+KNV+ + +I Y
Sbjct: 43 KVLNDQYLR-WNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLY 101
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+A+ +++ M + PD L A ++ ++ +G IH + + GL+ + + N L
Sbjct: 102 KDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGL 161
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
I MY K + +A QV + + + V++W +M++ A +G +AL++ ME +KPN+
Sbjct: 162 IAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPND 221
Query: 312 ITFIAILSA 320
T ++L A
Sbjct: 222 CTMASLLPA 230
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 180/481 (37%), Positives = 272/481 (56%), Gaps = 34/481 (7%)
Query: 8 QNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
+ H L + ID S S GF A ++ + N+ I+ + LN++ ++
Sbjct: 20 RRGHFLMKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFAL 79
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ ++ PD+ +FP VLKA +L +G+ IH + G DV+ AL+ +Y +C
Sbjct: 80 MHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLS 139
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
I DA ++FDE M E+N ++W LI GY
Sbjct: 140 ISDASQLFDE---------------------------------MPERNAVTWNALITGYT 166
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ +AI FR M + +P E ++ LSAC+ LGA G+WIH +I L V
Sbjct: 167 HNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVF 226
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ ALIDMYAK G + + +VFE ++ K+V TW +I+G A++G G AL FSRM
Sbjct: 227 VGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMEN 286
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+E+TF+ +L ACCH GLV GR F MK ++G++P+IE YGCM+DLLGRAG L+EA
Sbjct: 287 FKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEA 346
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+L++ M E + IW +LL A ++G+ +LGE ++ LI+LEP+N NY +LSNIY+
Sbjct: 347 LELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRE 406
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW E GK+R +M G++K+PGCS IE++ V+EFVA + P+F+ +Y+ L + ++
Sbjct: 407 RRWAEVGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKL 466
Query: 487 K 487
K
Sbjct: 467 K 467
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 280/485 (57%), Gaps = 38/485 (7%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N + + I +C+ A IF H + P+++ +N T+KAL Q + +A+ +N +
Sbjct: 24 NLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVS 83
Query: 70 S--ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
S A PD ++F VLKA L+ + G++IH G +S++ V +LI MY
Sbjct: 84 SPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYF----- 138
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGY 185
K G L AR LF+ M ++NV+ W +IAGY
Sbjct: 139 ----------------------------KAGYLLLARHLFDEMFVRDRNVVCWNAMIAGY 170
Query: 186 AQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
AQ ++ ++AI +FR MQ V P+++ +++ L ACA LGA++LG+WI +I + +
Sbjct: 171 AQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALG 230
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ L NAL DMYAK G I +A +VF M+ + VI+W+ +I GLA++G EA F M
Sbjct: 231 LFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLD 290
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
KPN++ F+ +L+AC H GLV+ G FN M YG+ PK+E YGC++DLL RAG L
Sbjct: 291 CGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELD 350
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
+AE ++ MP + N IWG+LL IY D G+ +QH+++L+ +SG+Y L+N+Y+
Sbjct: 351 KAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYS 410
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
+GR +++ K R MR+ GV K PGCS+IEV VHEF GD SHP+ +++Y ++ ++
Sbjct: 411 SMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMW 470
Query: 485 QMKFA 489
+MK A
Sbjct: 471 KMKLA 475
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPD--VYLYNTTIKALCQTDNPLNAV 61
+G + N + + ID G+ A +F D V +N I Q + +A+
Sbjct: 121 QGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAI 180
Query: 62 ILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ +Q + P++ + VL A L ++LG+ I + + + AL M
Sbjct: 181 EVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADM 240
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C CI +AR+VF+++ R +V W+ ++ G A G
Sbjct: 241 YAKCGCITEARRVFNKMEER--DVISWSIIICGLAMYG---------------------- 276
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QY 239
+EA F M KP+++ + L+AC G V+ G N ++ +Y
Sbjct: 277 ---------HADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEY 327
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
G++ V ++D+ +++G++ KA + +M K +VI W ++ G ++
Sbjct: 328 GVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIY 378
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 180/481 (37%), Positives = 272/481 (56%), Gaps = 34/481 (7%)
Query: 8 QNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
+ H L + ID S S GF A ++ + N+ I+ + LN++ ++
Sbjct: 20 RRGHFLMKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFAL 79
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ ++ PD+ +FP VLKA +L +G+ IH + G DV+ AL+ +Y +C
Sbjct: 80 MHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLS 139
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
I DA ++FDE M E+N ++W LI GY
Sbjct: 140 ISDASQLFDE---------------------------------MPERNAVTWNALITGYT 166
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ +AI FR M + +P E ++ LSAC+ LGA G+WIH +I L V
Sbjct: 167 HNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVF 226
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ ALIDMYAK G + + +VFE ++ K+V TW +I+G A++G G AL FSRM
Sbjct: 227 VGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMEN 286
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+E+TF+ +L ACCH GLV GR F MK ++G++P+IE YGCM+DLLGRAG L+EA
Sbjct: 287 FKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEA 346
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+L++ M E + IW +LL A ++G+ +LGE ++ LI+LEP+N NY +LSNIY+
Sbjct: 347 LELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRE 406
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW E GK+R +M G++K+PGCS IE++ V+EFVA + P+F+ +Y+ L + ++
Sbjct: 407 RRWAEVGKLRGMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKL 466
Query: 487 K 487
K
Sbjct: 467 K 467
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 297/544 (54%), Gaps = 68/544 (12%)
Query: 1 MIVRGLDQNNHLLSRF-IDSCSSLGFSDYAYSIFTHK-SKPDVYLYNTTIKALCQTDNPL 58
M+ ++ N + ++F + S S++G YA +F + + D +L N+ IKA +T
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIG-YARKLFDQRPQRDDSFLSNSMIKAYLETRQYP 59
Query: 59 NAVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++ LY + + + PDN++F + K+ + G ++H Q G +D++V +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 118 IQMYASCKCIYDARKVFDELSLR------------------------------VWNVAVW 147
+ MYA + AR FDE+ R V +V ++
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 148 NTMVAGYAKVGDLNNARALFELMT-------------------------------EKNVI 176
N M+ G+ K GD+ +AR LF+ MT E+N++
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
SW T+I GY Q QP E I LF+ MQ ++ PD++ +L+ L A + GA+ LGEW H +
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+++ L+ V + A++DMY+K G+I KA ++F+ M K V +W MI G AL+G R A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
LD+F M KP+EIT +A+++AC H GLVE GR++F++M+ G+ KIE YGCM+D
Sbjct: 360 LDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVD 417
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EAE L+ MPFE N I S L+A Y D+E E L+ ++LEP N GN
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L N+YA RW++ G ++ VMR KK GCS IE++ V EF++GDT+HP +
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI 537
Query: 476 YQIL 479
+ +L
Sbjct: 538 HLVL 541
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 276/464 (59%), Gaps = 10/464 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A F + DV +NT I Q+ A L+++ D +++ ++ ++
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQ 293
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+E RE+ + + + A++ Y + + A+++FD + R NV+ WN
Sbjct: 294 NRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR--NVSTWN 347
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ GYA+ G ++ A+ LF+ M +++ +SW +IAGY+Q EA+ LF +M+ E +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + +ALS CA + A+ELG+ +H + + G T + NAL+ MY K G I +A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M K +++W TMIAG + HG G AL F M+R +KP++ T +A+LSAC H GLV+
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR+YF M YG+ P + Y CM+DLLGRAG L++A L++ MPFE +AAIWG+LL A
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S ++G+ EL E A + +EP NSG Y +LSN+YA GRW + GK+R MRD GVKK+P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
G S+IE+ + H F GD HP+ D ++ L +++ +MK A ++
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 37/288 (12%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
ARK+FDE+ R ++ WN M+ GY + +L AR LFE+M E++V SW T+++GYAQ
Sbjct: 114 ARKLFDEMPER--DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 190 QPNEAITLFRRMQ--------------VENVKPDEIAML-------AALSACAQLGAVEL 228
++A ++F RM V+N K +E ML A +S LG
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK 231
Query: 229 GEWI---HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ I + + + +V N +I YA+SGKI +A Q+F+ + V TWT M++G
Sbjct: 232 KKKIVEARQFFDSMNVRDVVSW-NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
+ + EA ++F +M + NE+++ A+L+ +E+ + F++M R
Sbjct: 291 YIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----- 341
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + MI + G + EA+ L +MP + + W +++A + G
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSG 388
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 272/462 (58%), Gaps = 36/462 (7%)
Query: 28 YAYSIFTHK-SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA ++ T PD + NT ++ + P A+ L+ + A PD +++P +L+A
Sbjct: 72 YAVAVLTRVLPDPDPFSLNTVLRIAASSSRPSLALALHARRLAP---PDTHTYPPLLQAC 128
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L ++ G IH + GL + V V +L+ +Y +C A +VFDE+
Sbjct: 129 ARLLSLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIP-------- 180
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
+ E+N++SW +++ G+A +PNE +T+FR M N
Sbjct: 181 -----------------------VGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNF 217
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
PD +++ L+A A++GA+ LG +H Y+ + GL + NALID+YAK G + A +
Sbjct: 218 MPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARR 277
Query: 267 VFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VFE M ++V++WT++I GLA++G G+EAL++F MER ++ P EIT + +L AC H G
Sbjct: 278 VFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCG 337
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
LV+ G YFN MK Y I P+IE GCM+DLLGRAG ++EA + MP E NA +W +L
Sbjct: 338 LVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTL 397
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L A ++ +ELGE A L++L+P +SG+Y +LSN+YA +GRW + +RK M GV+
Sbjct: 398 LGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVR 457
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K PG S +E+ V+EFV GD SHP+ +++YQ+L ++ ++
Sbjct: 458 KNPGRSLVELRNSVYEFVMGDRSHPESEQIYQMLAEVADSLR 499
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/560 (34%), Positives = 305/560 (54%), Gaps = 79/560 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI+ + + N LL RFID L + A +F+ P+ Y +N I+ L T N
Sbjct: 54 MIINAIHKPNFLLHRFID----LKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNL 109
Query: 61 VI-LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
I Y +++ +RP+N+++PFV A L + G+ H + +GL +D HV +LI
Sbjct: 110 TIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLIT 169
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF----------EL 169
MY+ C + AR+VFDE+S + ++ WN+M++GY+++G +A LF +
Sbjct: 170 MYSRCGELGCARRVFDEISEK--DLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDE 227
Query: 170 MTEKNVI------------SW-----------------TTLIAGYAQMDQPNEAITLFRR 200
MT +++ SW + LI Y + + A +F R
Sbjct: 228 MTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDR 287
Query: 201 MQVENV-------------------------------KPDEIAMLAALSACAQLGAVELG 229
M ++V PD+I ++ LSACA +GA++ G
Sbjct: 288 MVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFG 347
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+W+ Y + GL + ++ ALIDMYAK G + AL+VFE+M K+ ++W MI+ LA H
Sbjct: 348 KWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFH 407
Query: 290 GLGREALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
G +E+L +F RM E V+PN+I+FI +LSAC H GLV+ GR+ F++M S +G+ PKI
Sbjct: 408 GRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKI 467
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
E + CM+DLL RAG++ EA + +MP + + + G+LL A +V++ E + L++
Sbjct: 468 EHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLE 527
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT 467
+EP NSGNY I S I+A + RW++S ++R +MR GV K PGCS+IE+ +VHEF AGD
Sbjct: 528 MEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDV 587
Query: 468 SHPDFDRLYQILCKINGQMK 487
H + Q++ +N +MK
Sbjct: 588 LHFISQDMCQVINLLNEEMK 607
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 283/492 (57%), Gaps = 41/492 (8%)
Query: 1 MIVRGLDQNNHLLSRFI--DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+V GL N ++ I S S G YA+ +F KPDV + N ++ Q+ P
Sbjct: 1 MVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPE 60
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
V LY +++ + PD Y+F FVLKA KL G H + V G + +V ALI
Sbjct: 61 KTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALI 120
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG-------------------- 158
+A+C + A ++FD+ S + VA W++M +GYAK G
Sbjct: 121 LFHANCGDLGIASELFDD-SAKAHKVA-WSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAW 178
Query: 159 -----------DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++++AR LF+ TEK+V++W +I+GY P EA+ +F+ M+
Sbjct: 179 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH 238
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIV----PLNNALIDMYAKSGKIG 262
PD + +L+ LSACA LG +E G+ +H YI E +++ + P+ NALIDMYAK G I
Sbjct: 239 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 298
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+A++VF +K++ + TW T+I GLALH +++MF M+R +V PNE+TFI ++ AC
Sbjct: 299 RAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACS 357
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G V+ GR+YF++M+ Y IEP I+ YGCM+D+LGRAG L+EA + M E NA +W
Sbjct: 358 HSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVW 417
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
+LL A IYG+VELG+ A + L+ + SG+Y +LSNIYA G+W+ K+RK+ D
Sbjct: 418 RTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDT 477
Query: 443 GVKKMPGCSYIE 454
VKK G S IE
Sbjct: 478 RVKKPTGVSLIE 489
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 291/530 (54%), Gaps = 73/530 (13%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G +YA +FT PD ++ NT I+ ++ NP AV LY + + DNY++P
Sbjct: 56 SHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYP 115
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FVL A +L ++LGR HC+ + G SD+ V+ ALIQ Y +C A VFDE ++R
Sbjct: 116 FVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVR 175
Query: 141 VWNVAVWNTMVAGY------------------------------------AKVGDLNNAR 164
+V WN M+ + A++G+L +
Sbjct: 176 --DVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK 233
Query: 165 ALF----ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV-------------- 206
L EL ++N+ ++ Y + D A +F R++ ++V
Sbjct: 234 FLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG 293
Query: 207 -----------------KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+ DEI ++ LSACAQ GA++ G++IH I+++ +N + L
Sbjct: 294 YFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 353
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+DMYAK G I ALQVF M+ ++V TW +I GLA+HG G +A+ +F +ME ++ P
Sbjct: 354 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMP 413
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+++TFIA+L AC H GLV+ G F MK+++ IEP++E YGC++DLL RA + +A
Sbjct: 414 DDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAF 473
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ MP +AN+ +W +LL A G +L E + +I+LEP + G Y +LSN+YA + +W
Sbjct: 474 IENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQW 533
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ + K+RK M++ G++K PGCS+IE++ +H+FVAGD SH +++Y ++
Sbjct: 534 DHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMI 583
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD+N + + +D + A +F + DV + + + L ++ A+ L+
Sbjct: 243 GLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALF 302
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+Q + + D + VL A + ++ G+ IH ++ D+ + AL+ MYA C
Sbjct: 303 QKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKC 362
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I A +VF +RV NV WN ++ G A G
Sbjct: 363 GSIDLALQVFRR--MRVRNVFTWNALIGGLAMHG-------------------------- 394
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNT 243
+AI+LF +M+ + + PD++ +A L AC+ G V+ G + ++ ++ +
Sbjct: 395 -----HGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEP 449
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAG 285
+ ++D+ ++ K+ AL ENM K+ + W T++
Sbjct: 450 RMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGA 492
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 295/498 (59%), Gaps = 16/498 (3%)
Query: 2 IVRGLDQNNHLLSRFIDSC---------SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALC 52
+V G + +++ D+C +LG + A +F + DV +N I +
Sbjct: 132 VVEGEKVHGYVVKSGFDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYV 191
Query: 53 QTDNPLNAVILYNKIQ-ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDV 111
+A+ ++ +++ S L+ D + L A L E+G EIH + V L+
Sbjct: 192 GHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIH-RYVDAELEMTT 250
Query: 112 HVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT 171
+ AL+ MY C C+ AR +FDE+ + NV W +MV+GYA G L+ AR LFE
Sbjct: 251 KIGNALLDMYCKCGCVDKARAIFDEMGNK--NVICWTSMVSGYASNGSLDEARELFERSP 308
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
++++ WT +I GY Q + +EA+ LFR+MQ++ ++PD ++ L CAQ GA+E G+W
Sbjct: 309 VRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKW 368
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+H YI + + + AL+D+YAK G + KAL+VF MK + +WT++I GLA++G+
Sbjct: 369 LHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGM 428
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+ALD FS+ME A +P++ITFI +L+AC H GLVE GRRYF+ M Y I+PK E Y
Sbjct: 429 TSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYS 488
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEAN---AAIWGSLLAASNIYGDVELGECALQHLIKL 408
C+IDLL RAG L EAE LL +P E++ ++ SLL+A YG++++ E + L ++
Sbjct: 489 CLIDLLCRAGLLDEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERV 548
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
E +S + +L+++YA RW + +R+ M+++G++K PGCS IEV+ +HEF+ G S
Sbjct: 549 EVKDSSVHTLLASVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPS 608
Query: 469 HPDFDRLYQILCKINGQM 486
H + D ++ +L ++ M
Sbjct: 609 HMEMDDIHSVLGQVTKWM 626
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 199/423 (47%), Gaps = 72/423 (17%)
Query: 5 GLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL N L++ + C+ S G YA + P + +YN IKA+ + +N ++
Sbjct: 43 GLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLV 102
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L+++++ L PDN++ P V KA+ L + G ++H V +G D+ V +++ MY
Sbjct: 103 LFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGEKVHGYVVKSGFDA--CVCNSVMGMYG 160
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ + A+KVFDE+ R +V WN +++ Y
Sbjct: 161 ALGKMEVAKKVFDEIPER--DVVSWNVLISSY---------------------------- 190
Query: 183 AGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
G+ + + +AI +FRRM+ E N+K DE +++ LSAC+ L E+GE IH Y++ L
Sbjct: 191 VGHRKFE---DAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAE-L 246
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG----------- 290
+ NAL+DMY K G + KA +F+ M NK+VI WT+M++G A +G
Sbjct: 247 EMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFER 306
Query: 291 --------------------LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
L EAL +F +M+ R++P+ + +L C G +E G
Sbjct: 307 SPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQG 366
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ + ++ ++D+ + G +++A ++ M E + A W S++
Sbjct: 367 KWLHGYIHENSITLDRVVGTA-LVDVYAKCGCVEKALEVFYEMK-ERDTASWTSVIYGLA 424
Query: 391 IYG 393
+ G
Sbjct: 425 VNG 427
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 285/524 (54%), Gaps = 39/524 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I L N+ L + + + +SL A +F + +V + N I++
Sbjct: 66 IISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREG 125
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ + + ++PD+Y+FP VLKA I +G++IH GL S + V L+ M
Sbjct: 126 IQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSM 185
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA----------------- 163
Y C + +AR V DE+S R +V WN++VAGYA+ ++A
Sbjct: 186 YGKCGFLSEARLVLDEMSRR--DVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAG 243
Query: 164 --------------------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ +F M +K+++SW +I Y + P EA+ L+ M+
Sbjct: 244 TMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEA 303
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ +PD +++ + L AC A+ LG+ IH YIE+ L + L NALIDMYAK G + +
Sbjct: 304 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDR 363
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VFENMK++ V++WT MI+ G G +A+ +FS+M+ + + P+ I F+ L+AC H
Sbjct: 364 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSH 423
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL+E GR F +M Y I P++E CM+DLLGRAG ++EA K ++ MP E N +WG
Sbjct: 424 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWG 483
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A ++ + ++G A L +L P SG Y +LSNIYA GRW E IR +M+ G
Sbjct: 484 ALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 543
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+KK PG S +EV++ +H F+ GD SHP +Y+ L + +MK
Sbjct: 544 LKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMK 587
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 36/239 (15%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL L T+ R +H + + L + + L++ YAS K + ARKVFDE+ R
Sbjct: 49 VLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPER- 104
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
NV + N M+ Y +NN G+ + E I +F M
Sbjct: 105 -NVIIINVMIRSY-----VNN---------------------GFYR-----EGIQVFGTM 132
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
+VKPD L AC+ G + +G+ IH + GL++ + + N L+ MY K G +
Sbjct: 133 CSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 192
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+A V + M + V++W +++AG A + +AL++ ME ++ + T ++L A
Sbjct: 193 SEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 251
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+H+ I L L L+ YA + A +VF+ + ++VI MI +G
Sbjct: 62 VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
RE + +F M VKP+ TF +L AC G + +G++ ++ G+ +
Sbjct: 122 YREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHG-SATKVGLSSTLFVGN 180
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLE 409
++ + G+ G+L EA +L M + W SL+A A N D L C +K+
Sbjct: 181 GLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKIS 239
Query: 410 PHNSGNYAIL 419
H++G A L
Sbjct: 240 -HDAGTMASL 248
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 275/492 (55%), Gaps = 33/492 (6%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
V G+ QN + ++ + S D AY +F D ++ + + + +N
Sbjct: 763 VHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFG 822
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
+ ++ RPDNY+ PFV++A L +++GR IH GLD D V AAL+ MY
Sbjct: 823 TFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYG 882
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C+ ++ +AR LF+ M E+++++WT +I
Sbjct: 883 KCR---------------------------------EIEDARFLFDKMXERDLVTWTVMI 909
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
GYA+ NE++ LF +M+ E V PD++AM+ + ACA+LGA+ I +YI++
Sbjct: 910 GGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQ 969
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
V L A+IDM+AK G + A ++F+ M+ K+VI+W+ MIA HG GR+ALD+F M
Sbjct: 970 LDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 1029
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R+ + PN+IT +++L AC H GLVE G R+F+ M Y + ++ Y C++DLLGRAG
Sbjct: 1030 LRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGR 1089
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L EA KL+ M E + +WG+ L A + DV L E A L++L+P N G+Y +LSNI
Sbjct: 1090 LDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNI 1149
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA GRW + KIR +M +KK+PG ++IEV + H+F GDT+HP +Y++L +
Sbjct: 1150 YANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSL 1209
Query: 483 NGQMKFAEHLQN 494
+++ ++ +
Sbjct: 1210 GNKLELVGYVPD 1221
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 274/492 (55%), Gaps = 33/492 (6%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
V G+ +N + ++ I S D AY +F D ++ + + + +N
Sbjct: 87 VHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFG 146
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
+ ++ RPDNY+ PFV++A L +++GR IH GLD D V AAL+ MY
Sbjct: 147 TFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYV 206
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C+ ++ +AR LF+ M E+++++WT +I
Sbjct: 207 KCR---------------------------------EIEDARFLFDKMQERDLVTWTVMI 233
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
GYA+ + NE++ LF +M+ E V PD++AM+ + ACA+LGA+ I +YI++
Sbjct: 234 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 293
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
V L A+IDMYAK G + A ++F+ M+ K+VI+W+ MIA HG GR+ALD+F M
Sbjct: 294 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 353
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ + P++IT ++L AC H GLVE G R+F+ M Y + ++ Y C++DLLGRAG
Sbjct: 354 LSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGR 413
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L EA KL++ M E + +WG+ L A + DV L E A L++L+ N G+Y +LSNI
Sbjct: 414 LDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNI 473
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA GRW + KIR +M +KK PG ++IEV + H+F GDT+HP +Y++L +
Sbjct: 474 YANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSL 533
Query: 483 NGQMKFAEHLQN 494
+ +++ ++ +
Sbjct: 534 SNKLELVGYVPD 545
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 142/278 (51%), Gaps = 4/278 (1%)
Query: 118 IQMYASCKCIYDARKVFDELSLR--VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
I +C+ + R+V + S+ + N+ V N ++ Y+ L++A LF+ M ++
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SW+ ++ G+A++ FR + +PD + + AC L +++G IH+
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ ++GL+ + AL+DMY K +I A +F+ M+ + ++TWT MI G A G E+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F +M V P+++ + ++ AC +G + R + ++ R + + MID
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ-RKKFQLDVILGTAMID 304
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + G ++ A ++ RM E N W +++AA +G
Sbjct: 305 MYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHG 341
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 283/492 (57%), Gaps = 41/492 (8%)
Query: 1 MIVRGLDQNNHLLSRFI--DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+V GL N ++ I S S G YA+ +F KPDV + N ++ Q+ P
Sbjct: 35 MVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPE 94
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
V LY +++ + PD Y+F FVLKA KL G H + V G + +V ALI
Sbjct: 95 KTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALI 154
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG-------------------- 158
+A+C + A ++FD+ S + VA W++M +GYAK G
Sbjct: 155 LFHANCGDLGIASELFDD-SAKAHKVA-WSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAW 212
Query: 159 -----------DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++++AR LF+ TEK+V++W +I+GY P EA+ +F+ M+
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH 272
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIV----PLNNALIDMYAKSGKIG 262
PD + +L+ LSACA LG +E G+ +H YI E +++ + P+ NALIDMYAK G I
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 332
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+A++VF +K++ + TW T+I GLALH +++MF M+R +V PNE+TFI ++ AC
Sbjct: 333 RAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACS 391
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G V+ GR+YF++M+ Y IEP I+ YGCM+D+LGRAG L+EA + M E NA +W
Sbjct: 392 HSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVW 451
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
+LL A IYG+VELG+ A + L+ + SG+Y +LSNIYA G+W+ K+RK+ D
Sbjct: 452 RTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDT 511
Query: 443 GVKKMPGCSYIE 454
VKK G S IE
Sbjct: 512 RVKKPTGVSLIE 523
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 279/473 (58%), Gaps = 5/473 (1%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
+HLL+ S SSL SDYA SI+ S P V+ N I+ + D P +++ LY+ +
Sbjct: 66 TSHLLAFLAISSSSLP-SDYALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMC 124
Query: 69 ASALR-PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
S + P+ ++ FVL+A I G ++ + G DV V ALI +Y +C +
Sbjct: 125 RSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRV 184
Query: 128 YDARKVFDEL-SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
A++VFDE+ S R +V WN+M+ G+ ++G ++ A+ LF M EK+VISW T+I+G
Sbjct: 185 ESAKQVFDEVPSSR--DVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCV 242
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
Q + +A+ F+ + + ++P+E +++ L+A AQLG +E G+ IH+
Sbjct: 243 QNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTAS 302
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L AL+DMYAK G I ++ +F+ M K +W MI GLA HGLG+EAL +F +
Sbjct: 303 LGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQG 362
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
P +TFI +L+AC GLV G+ +F +M YGIEP++E YGCM+DLL RAG++ +A
Sbjct: 363 FHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDA 422
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+++ RMP + +W S+L + ++G +ELGE LI+++P ++G+Y L+ I+A L
Sbjct: 423 VEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARL 482
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+W + K+R++M + K+ G S IE RVH FVAGD H +Y++L
Sbjct: 483 RKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIYKML 535
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/439 (38%), Positives = 262/439 (59%), Gaps = 6/439 (1%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV+++ KI PD + VL +V + +GR IH + GL D V++A+I
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK----NV 175
MY +Y +F++ + V N + G ++ G ++ A +FEL E+ NV
Sbjct: 296 MYGKSGHVYGIISLFNQFEM--MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT++IAG AQ + EA+ LFR MQV VKP+ + + + L AC + A+ G H +
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ L V + +ALIDMYAK G+I + VF M K+++ W +++ G ++HG +E
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F + R R+KP+ I+F ++LSAC VGL + G +YF +M YGI+P++E Y CM++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG LQEA L++ MPFE ++ +WG+LL + + +V+L E A + L LEP N G
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA G W E IR M +G+KK PGCS+I+V RV+ +AGD SHP D++
Sbjct: 594 YVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Query: 476 YQILCKINGQMKFAEHLQN 494
+ + +I+ +M+ + H N
Sbjct: 654 TEKMDEISKEMRKSGHRPN 672
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 211/428 (49%), Gaps = 43/428 (10%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++ ++ I S S+ + A + P +Y +++ I AL + ++ ++
Sbjct: 45 GAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVF 104
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + L PD++ P + K +LS ++G++IHC + +GLD D V ++ MY C
Sbjct: 105 SRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC 164
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA-RALFELMT---EKNVISWTT 180
+ DARKVFD +S + +V + ++ YA+ G L R L E+ + E N++SW
Sbjct: 165 GRMGDARKVFDRMSDK--DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+++G+ + EA+ +F+++ PD++ + + L + + +G IH Y+ + G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 241 LNTIVPLNNALIDMYAKSGK-------------------------------IGKALQVFE 269
L + +A+IDMY KSG + KAL++FE
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 270 NMKNKS----VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
K ++ V++WT++IAG A +G EAL++F M+ A VKPN +T ++L AC ++
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ GR R + + +ID+ + G + ++ + MP + N W SL
Sbjct: 403 ALGHGRSTHGF-AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSL 460
Query: 386 LAASNIYG 393
+ +++G
Sbjct: 461 MNGFSMHG 468
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 16 FIDSCSSLGFSDYAYSIFT----HKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+I S G D A +F + +V + + I Q + A+ L+ ++Q +
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
++P++ + P +L A ++ + GR H V L +VHV +ALI MYA C I ++
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE-LMTEK---NVISWTTLIAGYAQ 187
VF+ + + N+ WN+++ G++ G ++FE LM + + IS+T+L++ Q
Sbjct: 444 IVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 188 MDQPNEAITLFRRMQVE-NVKP 208
+ +E F+ M E +KP
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKP 523
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 278/456 (60%), Gaps = 6/456 (1%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DYAY + S P Y +N I+ + NP ++ +Y ++ L PD+ ++PF++K+
Sbjct: 805 DYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS 864
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+LS +LG +HC V +GL+ D+ + LI MY S + ARK+FDE+ + N+
Sbjct: 865 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK--NLVT 922
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVEN 205
WN+++ YAK GD+ +AR +F+ M+E++V++W+++I GY + + N+A+ +F +M ++ +
Sbjct: 923 WNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 982
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
K +E+ M++ + ACA LGA+ G+ +H YI L V L +LIDMYAK G IG A
Sbjct: 983 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 1042
Query: 266 QVF--ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
VF ++K + W +I GLA HG RE+L +F +M +++ P+EITF+ +L+AC H
Sbjct: 1043 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 1102
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ +F +K G EPK E Y CM+D+L RAG +++A + MP + ++ G
Sbjct: 1103 GGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 1161
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL +G++EL E + LI+L+PHN G Y L+N+YAI ++ + +R+ M G
Sbjct: 1162 ALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 1221
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
VKK+ G S +++ H F+A D +H D++Y +L
Sbjct: 1222 VKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 1257
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 183/435 (42%), Gaps = 47/435 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYS----IFTHKSKPDVYLYNTTIKALCQTDN 56
M+ +GL + ID G D S ++ + PDV Y + I LC +
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKL----STIELGREIHCQTVGTGLDSDVH 112
P A+ +N+++ P+ +F +++ + K + RE+ + ++ D
Sbjct: 700 PSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKE----MEPDSA 755
Query: 113 VVAALIQMYASCKCIYDARKVFDELSLR-VWNVAVWNTMVAGYAKVGDLNNARALFELMT 171
V +L+ + S + I +F E+ + + V+V + D++ A ++
Sbjct: 756 VYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKFLSKLS 815
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
+ W +I G++ P ++I+++ +M + PD + + + ++L +LG
Sbjct: 816 DPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGS 875
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS---------------- 275
+H + + GL + + N LI MY A ++F+ M +K+
Sbjct: 876 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGD 935
Query: 276 ---------------VITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILS 319
V+TW++MI G G +AL++F +M R K NE+T ++++
Sbjct: 936 VVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVIC 995
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF-EAN 378
AC H+G + G+ + + I Q +ID+ + G + +A + R E +
Sbjct: 996 ACAHLGALNRGKTVHRYILDVHLPLTVILQTS-LIDMYAKCGSIGDAWSVFYRASVKETD 1054
Query: 379 AAIWGSLLAASNIYG 393
A +W +++ +G
Sbjct: 1055 ALMWNAIIGGLASHG 1069
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 158/388 (40%), Gaps = 41/388 (10%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P +YN I+ +C+ ++ L +++ + + P ++ + + + ++
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
+ G + + L++ DA K D+ VAG +G
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDD--------------VAGEGFLG 577
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
++++ T I G + + + + LFR + PD IA +
Sbjct: 578 ---------------HMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK 622
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL----QVFENMKNK 274
A + + + N + GL V N++ID + K G+I + L +++E+ KN
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
VIT+T++I GL G EA+ ++ M+ PN ITF+A++ C G YF
Sbjct: 683 DVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN--AAIWGSLLAASNIY 392
M+ + +EP Y ++ + + + R M + ++ + + A N+
Sbjct: 743 REMEEK-EMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVT 801
Query: 393 GDVELGECALQHLIKL-EPHNSG-NYAI 418
DV+ A + L KL +P N G N+ I
Sbjct: 802 SDVDY---AYKFLSKLSDPPNYGWNFVI 826
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/457 (38%), Positives = 269/457 (58%), Gaps = 37/457 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL+QN ++ + I C S G DYA +F PD +L+NT I+ L +T P
Sbjct: 74 VIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIENPDGFLWNTMIRGLGRTRQPE 133
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A Y ++Q DN+++ F++K +L + LG++IHC + GL+ V V L+
Sbjct: 134 KAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLV 193
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY K I A +F+E M + +++W
Sbjct: 194 HMYGMFKDIEAATHLFEE---------------------------------MPKSYLVAW 220
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T+I + EAI LF RM +KPD+ + LSACA LG +++G +H+ I+
Sbjct: 221 NTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDH 280
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL +V ++N+LIDMYAK G + A ++F MK +++++W TMI GLA+HG G EAL++
Sbjct: 281 TGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALEL 340
Query: 299 FSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
FS+M E PNE+TF+ +L AC H G+VE GRRYF+IM+ Y I+P I+ YG M+D+L
Sbjct: 341 FSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDIL 400
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG ++EA +L++ MP E+N+ +W +LLAA ++G++EL E Q L++LEP +S +Y
Sbjct: 401 GRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQXLLELEPDHSSDYV 460
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKK-MPGCSYI 453
+L+N+YA G+WN+ ++RK M GV+K PG SYI
Sbjct: 461 LLANMYASAGQWNKVXRVRKSMHIRGVQKPKPGNSYI 497
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 298/531 (56%), Gaps = 49/531 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP--DVYLYNTTIKALCQTDNPL 58
++ +GL N +R + + + L + +F P D +L NT ++A P
Sbjct: 375 VLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFDAIRDPHADAFLANTMLRAYALGGAPR 434
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+A+ ++ + R D++++ F++KA+ + R +H V G D V ALI
Sbjct: 435 DALAAFSAMP----RRDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNALI 489
Query: 119 QMYASCKCIYDARKVFDELSLR---VWNVAV--------------------------WNT 149
Y+ DARKVFDE+ R WN A+ WNT
Sbjct: 490 DAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNT 549
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN---- 205
++ GY K G++ A LF+ M E+NV+SW+T+++GY + A +F +M +N
Sbjct: 550 ILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTW 609
Query: 206 --------VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
V+ D A+++ L+ACA+ G++ LG+ IH Y+ + L + NALIDM+ K
Sbjct: 610 TIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCK 669
Query: 258 SGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
G + +A VF+ K ++W ++I G A+HG G +AL++F++M++ P+ +T I
Sbjct: 670 CGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMIN 729
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+LSAC H+G V+ GRRYF+ M+ YGI P+IE YGCMIDLLGR G ++EA L++ MP+E
Sbjct: 730 VLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWE 789
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
N IWGSLL+A ++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++ K R
Sbjct: 790 PNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKAR 849
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
M+ G +K G S++E+++ HEF GD H D D++ +++ +++ +K
Sbjct: 850 MQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 900
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 144/344 (41%), Gaps = 55/344 (15%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
RE+H Q + GL + A L+ YA + + +R+VFD + + + NTM+ YA
Sbjct: 369 RELHAQVLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFDAIRDPHADAFLANTMLRAYA 428
Query: 156 KVGDLNNARALFELMTEKNVISWT----------------------------------TL 181
G +A A F M ++ +++ L
Sbjct: 429 LGGAPRDALAAFSAMPRRDSFTYSFLIKALSAAGVAPVRAVHSHVVKLGSVEDTFVGNAL 488
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I Y++ ++A +F M +V AM A + GA +L + E
Sbjct: 489 IDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKL------FDEMPEK 542
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+T+ N ++D Y K+G++ A ++F+ M ++V++W+TM++G G A +F +
Sbjct: 543 DTVS--WNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDK 600
Query: 302 ------------MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
M+ A V+ + ++IL+AC G + LG+R ++ R +
Sbjct: 601 MPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKR-NLGRSTHV 659
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G + A+ + + ++ W S++ ++G
Sbjct: 660 CNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 703
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 273/481 (56%), Gaps = 9/481 (1%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S +D S G + A +F +V +N+ I Q + A+ ++ + S +
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARK 132
PD + V+ A LS I++G+E+H + V L +D+ + A + MYA C I +AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD + +R NV +M++GYA AR +F M E+NV+SW LIAGY Q +
Sbjct: 311 IFDSMPIR--NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------TIVP 246
EA++LF ++ E+V P + L ACA L + LG H ++ ++G +
Sbjct: 369 EALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIF 428
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G + + VF M + ++W MI G A +G G EAL++F M +
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+ IT I +LSAC H G VE GR YF+ M +G+ P + Y CM+DLLGRAG+L+EA
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ ++ MP + ++ IWGSLLAA ++ ++ LG+ + L+++EP NSG Y +LSN+YA L
Sbjct: 549 KSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAEL 608
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
G+W + +RK MR GV K PGCS+I++ H F+ D SHP +++ +L + +M
Sbjct: 609 GKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Query: 487 K 487
+
Sbjct: 669 R 669
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 174/322 (54%), Gaps = 9/322 (2%)
Query: 75 DNYSFPFVLKAVVK--LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
D+ F +L + +K LS I + R +H + +G +++ + LI Y+ C + D R+
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD++ R N+ WN++V G K+G L+ A +LF M E++ +W ++++G+AQ D+
Sbjct: 77 VFDKMPQR--NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ F M E +E + + LSAC+ L + G +H+ I + + V + +AL+
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY+K G + A +VF+ M +++V++W ++I +G EALD+F M +RV+P+E+
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T +++SAC + +++G+ + + I +D+ + ++EA +
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 373 MPFE----ANAAIWGSLLAASN 390
MP + I G +AAS
Sbjct: 315 MPIRNVIAETSMISGYAMAAST 336
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 189/416 (45%), Gaps = 73/416 (17%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ LGF D A S+F + D +N+ + Q D A+ + + + YSF
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VL A L+ + G ++H + SDV++ +AL+ MY+ C + DA++VFDE+ R
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
NV WN+++ + + G A +F++M E
Sbjct: 217 --NVVSWNSLITCFEQNGPAVEALDVFQMMLES--------------------------- 247
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSG 259
V+PDE+ + + +SACA L A+++G+ +H ++ L + L+NA +DMYAK
Sbjct: 248 ----RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 260 KIGKALQVFENMK-------------------------------NKSVITWTTMIAGLAL 288
+I +A +F++M ++V++W +IAG
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRY----GI 343
+G EAL +F ++R V P +F IL AC + + LG + + +++K + G
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 397
E I +ID+ + G ++E + R+M E + W +++ A N YG+ L
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEAL 478
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/439 (38%), Positives = 262/439 (59%), Gaps = 6/439 (1%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV+++ KI PD + VL +V + +GR IH + GL D V++A+I
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK----NV 175
MY +Y +F++ + V N + G ++ G ++ A +FEL E+ NV
Sbjct: 296 MYGKSGHVYGIISLFNQFEM--MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT++IAG AQ + EA+ LFR MQV VKP+ + + + L AC + A+ G H +
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ L V + +ALIDMYAK G+I + VF M K+++ W +++ G ++HG +E
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F + R R+KP+ I+F ++LSAC VGL + G +YF +M YGI+P++E Y CM++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG LQEA L++ MPFE ++ +WG+LL + + +V+L E A + L LEP N G
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA G W E IR M +G+KK PGCS+I+V RV+ +AGD SHP D++
Sbjct: 594 YVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Query: 476 YQILCKINGQMKFAEHLQN 494
+ + +I+ +M+ + H N
Sbjct: 654 TEKMDEISKEMRKSGHRPN 672
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 211/428 (49%), Gaps = 43/428 (10%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++ ++ I S S+ + A + P +Y +++ I AL + ++ ++
Sbjct: 45 GAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVF 104
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + L PD++ P + K +LS ++G++IHC + +GLD D V ++ MY C
Sbjct: 105 SRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC 164
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA-RALFELMT---EKNVISWTT 180
+ DARKVFD +S + +V + ++ YA+ G L R L E+ + E N++SW
Sbjct: 165 GRMGDARKVFDRMSDK--DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+++G+ + EA+ +F+++ PD++ + + L + + +G IH Y+ + G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 241 LNTIVPLNNALIDMYAKSGK-------------------------------IGKALQVFE 269
L + +A+IDMY KSG + KAL++FE
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 270 NMKNKS----VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
K ++ V++WT++IAG A +G EAL++F M+ A VKPN +T ++L AC ++
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ GR R + + +ID+ + G + ++ + MP + N W SL
Sbjct: 403 ALGHGRSTHGF-AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSL 460
Query: 386 LAASNIYG 393
+ +++G
Sbjct: 461 MNGFSMHG 468
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 16 FIDSCSSLGFSDYAYSIFT----HKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+I S G D A +F + +V + + I Q + A+ L+ ++Q +
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
++P++ + P +L A ++ + GR H V L +VHV +ALI MYA C I ++
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE-LMTEK---NVISWTTLIAGYAQ 187
VF+ + + N+ WN+++ G++ G ++FE LM + + IS+T+L++ Q
Sbjct: 444 IVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 188 MDQPNEAITLFRRMQVE-NVKP 208
+ +E F+ M E +KP
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKP 523
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 266/445 (59%), Gaps = 2/445 (0%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F ++ + + T + Q ++ L+ +++ + PD + VL A
Sbjct: 319 DKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSAC 378
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
V L +LGR +H V G+ D + AL+ +YA C + +A + F++L + + A
Sbjct: 379 VHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCK--SAAS 436
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN+M+ G+ + G ++ AR F + EK+++SW T++ Y + D NE+ +F +MQ NV
Sbjct: 437 WNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNV 496
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KPD+ +++ LS+CA++GA+ G W++ YIE+ + L ALIDMY K G + A +
Sbjct: 497 KPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYE 556
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F + K+V WT M+A A+ G EA+D++ ME VKP+ +TFIA+L+AC H GL
Sbjct: 557 IFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGL 616
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ G +YFN ++S Y I P I YGCM+DLLGR G+L+E K + RMP E + +IW SL+
Sbjct: 617 VDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLM 676
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A + +VEL E A + LI+++P N+G + +LSNIYA GRW++ K+R + + GV K
Sbjct: 677 RACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPK 736
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPD 471
PG + IE + VHEFVA + D
Sbjct: 737 QPGFTMIEQNGVVHEFVASNLVSAD 761
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 215/423 (50%), Gaps = 41/423 (9%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
R NN+L+ + C L + TH+ DV +NT I A+ L
Sbjct: 166 RNKSLNNNLMGLY-SKCGKLKEVCQLFEKMTHR---DVISWNTMISCYVLKGMYREALDL 221
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++++ S + PD + ++ KL +E+G+ +H V L ++ L+ MY+
Sbjct: 222 FDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSK 281
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + +A + +V +W T+V+GY K ++ AR LF+ M E++++SWTT+++
Sbjct: 282 CGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMS 341
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q E++ LF++M+ ENV PDE+A++ LSAC L +LG +H +I YG+
Sbjct: 342 GYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLV 401
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKS---------------------------- 275
L NAL+D+YAK GK+ +AL+ FE + KS
Sbjct: 402 DGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIP 461
Query: 276 ---VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+++W TM+ H L E+ ++F +M+ + VKP++ T I++LS+C VG + G
Sbjct: 462 EKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHG-I 520
Query: 333 YFN--IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ N I K+ GI+ + +ID+ G+ G ++ A ++ ++ E N +W +++AA
Sbjct: 521 WVNVYIEKNEIGIDAMLGT--ALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAAYA 577
Query: 391 IYG 393
+ G
Sbjct: 578 MEG 580
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 213/478 (44%), Gaps = 71/478 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I L + + S+ + S+ D A+ I ++ +P+ ++NT ++ + P
Sbjct: 58 LITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEV 117
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y + + D +F F++ A K ++LG E+H + + G + + L+ +
Sbjct: 118 LECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGL 177
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + + ++F++++ R +V WNTM++ Y G
Sbjct: 178 YSKCGKLKEVCQLFEKMTHR--DVISWNTMISCYVLKG---------------------- 213
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
EA+ LF M V V PDEI M++ +S CA+L +E+G+ +H YI
Sbjct: 214 ---------MYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNK 264
Query: 241 LNTIVPLNNALIDMYAKSG---------------------------------KIGKALQV 267
L L N L+DMY+K G KI KA Q+
Sbjct: 265 LWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQL 324
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ M +S+++WTTM++G G E+L++F +M V P+E+ + +LSAC H+
Sbjct: 325 FDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDF 384
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+LGR + + YG+ ++DL + G L EA + ++P ++ AA W S+L
Sbjct: 385 DLGRSVHAFIVT-YGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS-AASWNSMLD 442
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
G V+ A K+ + ++ + N Y +NES +I M+ VK
Sbjct: 443 GFCRSGGVDK---ARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVK 497
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 157/328 (47%), Gaps = 18/328 (5%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++A V +L+ A + E I W TL+ + P E + + M + V D
Sbjct: 73 VLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLD 132
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ AC + V+LG +H I + G LNN L+ +Y+K GK+ + Q+FE
Sbjct: 133 ISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFE 192
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M ++ VI+W TMI+ L G+ REALD+F M + V P+EIT ++++S C + +E+
Sbjct: 193 KMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEM 252
Query: 330 GRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM-PFEANAAIWGSLLA 387
G+R + I+ ++ I + C++D+ + G + EA LL R E + +W +L++
Sbjct: 253 GKRLHLYIVDNKLWIRGSL--LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVS 310
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG---- 443
Y + A Q K+ + ++ + + Y G + ES ++ + MR
Sbjct: 311 G---YVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPD 367
Query: 444 ----VKKMPGCSYIE---VSKRVHEFVA 464
V + C ++E + + VH F+
Sbjct: 368 EVALVTVLSACVHLEDFDLGRSVHAFIV 395
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N +L F S G D A F + D+ +NT + A + D + ++ K+Q+
Sbjct: 438 NSMLDGFCRS----GGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS 493
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
S ++PD + +L + K+ + G ++ + D + ALI MY C C+
Sbjct: 494 SNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEM 553
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A ++F ++ + NV VW M+A YA G
Sbjct: 554 AYEIFTQIIEK--NVFVWTAMMAAYAMEG------------------------------- 580
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
Q EAI L+ M+ VKPD + +A L+AC+ G V+ G N + + N I +++
Sbjct: 581 QALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSF-YNIIPTIHH 639
Query: 250 --ALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
++D+ + G + + ++ E M V W++++ H
Sbjct: 640 YGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSH 682
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 225/338 (66%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
M+ YAK G ++ AR LF+ + E++ I W +I GYAQ PNE + LFR+M V+P+
Sbjct: 12 MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPN 71
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E+ +LA LSAC Q GA+E G W+H+YIE G+ V + +LIDMY+K G + A VFE
Sbjct: 72 EVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFE 131
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
+ NK V+ W +M+ G A+HG ++AL +F M +P +ITFI +L+AC H GLV
Sbjct: 132 RISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSE 191
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G ++F MK YGIEPK+E YGCM++LLGRAGYL+EA +L++ M + + +WG+LL A
Sbjct: 192 GWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGAC 251
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
++G++ LGE ++L+ NSG Y +LSNIYA G W ++R +M++ G +K PG
Sbjct: 252 RLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPG 311
Query: 450 CSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
CS IEV+ +VHEF+AGD HP +Y++L +ING +K
Sbjct: 312 CSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLK 349
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L+ I + G D A +F + D +N I Q P ++L+ ++ + +
Sbjct: 9 LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
RP+ + VL A + +E GR +H G+ +V V +LI MY+ C + DAR
Sbjct: 69 RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF+ +S + +V WN+MV GYA + G++Q
Sbjct: 129 VFERISNK--DVVAWNSMVVGYA--------------------------MHGFSQ----- 155
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNAL 251
+A+ LF+ M + +P +I + L+AC+ G V G ++ ++ ++YG+ V +
Sbjct: 156 DALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCM 215
Query: 252 IDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+++ ++G + +A ++ +NM+ ++ + W T++ LHG
Sbjct: 216 VNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHG 255
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
A+I YAK G I +A +F+ ++ + I W MI G A HGL E L +F +M A+V+
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PNE+T +A+LSAC G +E GR + +++ GI + +ID+ + G L++A
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENN-GIGINVRVGTSLIDMYSKCGSLEDARL 128
Query: 369 LLRRMPFEANAAIWGSLLAASNIYG 393
+ R+ + W S++ ++G
Sbjct: 129 VFERIS-NKDVVAWNSMVVGYAMHG 152
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/457 (37%), Positives = 267/457 (58%), Gaps = 37/457 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I G +QN ++ + I C++ D YA S+F PD +++NT I+ + ++P
Sbjct: 11 VIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMIRGFGKANDPR 70
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A Y ++Q L D+++F F+LK +L + LGR +HC T+ GL+S V V L+
Sbjct: 71 KAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLNSHVFVRNTLV 130
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY + K I +R++F+E+ + WN ++ + G
Sbjct: 131 HMYGTFKDIEASRQLFEEIPNP--ELVAWNIIIDCHVSCGKF------------------ 170
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
NEA+ +F RM ++PDE + LSAC+ LGA++ G W+H+ I
Sbjct: 171 -------------NEALEMFSRMLKFGIEPDEATFVVILSACSALGALDFGRWVHSCISN 217
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G I +NN+L+DMYAK G + +A ++F M K+ +TW TMI GLA HG EAL +
Sbjct: 218 IGHGCITEVNNSLLDMYAKCGALQEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALAL 277
Query: 299 FSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
FS M E+ P++ITF+ +LSAC H G+V+ G R+F+IMK Y I+P I+ YGCM+D+L
Sbjct: 278 FSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDIL 337
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG+++EA +L+ MP + NA +W +LLAA ++G+VELG+ + L++LEP +S +Y
Sbjct: 338 GRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVELGKQVRKQLLELEPDHSSDYV 397
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKK-MPGCSYI 453
+L+N YA GRWNE+ ++RK M GV+K PG S +
Sbjct: 398 LLANTYASAGRWNEAMRVRKTMHKRGVQKPEPGNSVV 434
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 285/473 (60%), Gaps = 11/473 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N+LL+ +D+ S + +YAY + + S P Y +N I+ + NP ++ +Y +I
Sbjct: 793 NYLLA--VDATSDV---NYAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRVYIQILR 847
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
S PD+ ++PF+LK+ +LS E+G +HC V TGL+ D+ + LI MY S +
Sbjct: 848 SGFSPDHMTYPFLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKAS 907
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
ARK+FDE+ + N+ WN+++ YAK GD+ +AR +F+ MT ++V++W+++I GY +
Sbjct: 908 ARKLFDEMPYK--NLVTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGYVKSG 965
Query: 190 QPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+ NEA+ +F +M ++ + K +E+ M++ L ACA LG + G+ +H YI L V L
Sbjct: 966 EYNEALEIFDQMMRMGSSKANEVTMVSVLCACAHLGELNRGKVVHRYILDVHLPLTVILQ 1025
Query: 249 NALIDMYAKSGKIGKALQVF--ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+LIDMYAK G IG A VF ++K + W MI GLA HG RE+L +F +M +
Sbjct: 1026 TSLIDMYAKCGSIGDAWGVFCGASVKKTDALMWNAMIGGLASHGFIRESLLLFHKMRESE 1085
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+ P+EITF+ +L+AC H GLV+ +F +K G EPK E Y CM+D+L RAG +++A
Sbjct: 1086 IDPDEITFLCLLAACSHGGLVKEAWHFFTSLKES-GAEPKSEHYACMVDVLSRAGLVKDA 1144
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ M + ++ G+L +G++EL E + LI+L+PHN G Y L+N+YAI
Sbjct: 1145 HDFISEMLIKPTGSVLGALFNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAIN 1204
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
++ + +R+ M GVKK+ G S I+++ H F+A D +H D++Y +L
Sbjct: 1205 KQFGAARSMREAMEKKGVKKIAGHSIIKLNGTSHRFIAHDQTHFHSDKIYAVL 1257
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 158/368 (42%), Gaps = 37/368 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYS----IFTHKSKPDVYLYNTTIKALCQTDN 56
M+ +GL + + ID G D S ++ + PDV Y + I LC +
Sbjct: 640 MVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASRR 699
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
P A+ +N+++ P+ +F +++ + + ++ D V +
Sbjct: 700 PSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYFREMEEKEMEPDSAVYLS 759
Query: 117 LIQMYASCKCIYDARKVFDELSLR-VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
L+ + S + I +F E+ + + V+V + D+N A L ++
Sbjct: 760 LVSSFLSSENISAGFGIFREMVHKGRFPVSVDRNYLLAVDATSDVNYAYKLLSKLSNPPD 819
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
W +I G++ P ++I ++ ++ PD + L + ++L E+G +H
Sbjct: 820 YGWNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHMTYPFLLKSSSRLSNREIGGSLHCS 879
Query: 236 IEQYGL-------NTIVPLN------------------------NALIDMYAKSGKIGKA 264
+ + GL NT++ + N+++D YAKSG + A
Sbjct: 880 VVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYKNLVTWNSILDSYAKSGDVVSA 939
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCH 323
VF+ M + V+TW++MI G G EAL++F +M R K NE+T +++L AC H
Sbjct: 940 RLVFDEMTMRDVVTWSSMIDGYVKSGEYNEALEIFDQMMRMGSSKANEVTMVSVLCACAH 999
Query: 324 VGLVELGR 331
+G + G+
Sbjct: 1000 LGELNRGK 1007
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 34/316 (10%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P + +YN I+ +C+ ++ L +++ + + P Y+ + + + ++
Sbjct: 472 PSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYTLNCIYGCLAERCDFAGALDL 531
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
+ G + + L++ DA K D+ VAG +
Sbjct: 532 LKKMRFYGFEPWIKHTTCLVKKLCENGKAVDACKYIDD--------------VAGEGFL- 576
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
++++S+T I G + + + + LFR PD IA +
Sbjct: 577 --------------RHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIK 622
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL----QVFENMKNK 274
A + + + N + GL V N++ID + K G+I + L +++E+ KN
Sbjct: 623 ALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
VIT+T++I GL EA+ ++ M+ PN ITF+A++ C+ G YF
Sbjct: 683 DVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYF 742
Query: 335 NIMKSRYGIEPKIEQY 350
M+ + +EP Y
Sbjct: 743 REMEEKE-MEPDSAVY 757
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 167/418 (39%), Gaps = 37/418 (8%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
PDV Y+ IKALC+ A L+N++ + L+P ++ ++ K I+ G
Sbjct: 612 PDVIAYHVLIKALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSC 671
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
+ + DV +LI + + +A ++ WN M K
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASRRPSEA-------------ISRWNEM-----KGK 713
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
D N I++ LI G +EA+ FR M+ + ++PD L+ +S
Sbjct: 714 D-----------CYPNRITFMALIQGLCNCGWSSEALVYFREMEEKEMEPDSAVYLSLVS 762
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
+ + G I + G + N L+ + A S + A ++ + N
Sbjct: 763 SFLSSENISAGFGIFREMVHKGRFPVSVDRNYLLAVDATS-DVNYAYKLLSKLSNPPDYG 821
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIM 337
W +I G + +++ ++ ++ R+ P+ +T+ +L + + E+G + +++
Sbjct: 822 WNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHMTYPFLLKSSSRLSNREIGGSLHCSVV 881
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
K+ G+E + +I + G A KL MP++ N W S+L + GDV
Sbjct: 882 KT--GLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYK-NLVTWNSILDSYAKSGDVVS 938
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
+ + ++ + + Y G +NE+ +I M MG K + + V
Sbjct: 939 ARLVFDEMTM---RDVVTWSSMIDGYVKSGEYNEALEIFDQMMRMGSSKANEVTMVSV 993
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 292/478 (61%), Gaps = 4/478 (0%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
RG D + + + I + G +A +F S DV + T I + + A+ L
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+N + +S ++P+ + +L A + E+G+ +H + ++++ A++ MY
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVK 300
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C+ AR++F+ + R +V W +++ GYAK GDL +AR LF+ M E+N++SW +IA
Sbjct: 301 CGCLTTAREIFNNMERR--DVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIA 358
Query: 184 GYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGL 241
GY+Q QP EA+ LF M V + P E ++ LSA QLG +E+G+ IH N++ + G+
Sbjct: 359 GYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGI 418
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ L NA++DMYAK G I A ++F +M K++++W +MI+ A +G ++AL +F +
Sbjct: 419 QVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQ 478
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M + +KP+ ITFI +LSAC + G V G+ +F M++ +G+EPK E Y CM+DLL R G
Sbjct: 479 MIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVG 538
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L+EA +L+ RMP EA+ WG+LL A +G+VE+ + A + L++L+P +SG Y++L+N
Sbjct: 539 LLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLAN 598
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
I A +W + +R++MR+ GVKK+PG S IE+ + HEF+ DTSH +Y+++
Sbjct: 599 ICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVV 656
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 68/414 (16%)
Query: 14 SRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
SR + C S G YA+ IF P+ + +NT IK C+ ++P + ++ +
Sbjct: 88 SRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNR 147
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
D+ SF F LKA + + +G +H G DSD+ V LIQ Y C+ AR
Sbjct: 148 AEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFAR 207
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
++FDE S++ +V W TM+ GYA+ NN W
Sbjct: 208 QMFDESSVK--DVVTWTTMINGYAR----NN---------------WL------------ 234
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+EAI LF M +VKP+E+ M+A LSAC+Q G E+G+ +H +I + + + L NA+
Sbjct: 235 DEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAM 294
Query: 252 IDM-------------------------------YAKSGKIGKALQVFENMKNKSVITWT 280
+DM YAK+G +G A ++F+ M +++++W
Sbjct: 295 LDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWN 354
Query: 281 TMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
MIAG + + EAL++F M + + P E T + +LSA +G +E+G+ +
Sbjct: 355 AMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVN 414
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ GI+ + ++D+ + G + A KL MP E N W S+++A YG
Sbjct: 415 KIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMP-EKNLVSWNSMISAYASYG 467
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 2/238 (0%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
GD++ A +F+ N W T+I GY + + P+ + FR+M + D + + AL
Sbjct: 100 GDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFAL 159
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
AC Q +G +H+ I + G ++ + + N LI Y ++G +G A Q+F+ K V+
Sbjct: 160 KACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVV 219
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
TWTTMI G A + EA+ +F+ M + VKPNE+T IA+LSAC G E+G+ +
Sbjct: 220 TWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHI 279
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+ R I + M+D+ + G L A ++ M + W SLL GD+
Sbjct: 280 R-RKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNME-RRDVFSWTSLLNGYAKNGDL 335
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 256/450 (56%), Gaps = 35/450 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F DV +N I +T + A+ L+ ++ + +RPD + VL A +
Sbjct: 151 AQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQ 210
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ELGR++H G S++ +V ALI +Y+
Sbjct: 211 SRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYS-------------------------- 244
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
K G + A LFE ++ K+V+SW TLI GY M+ EA+ LF+ M P
Sbjct: 245 -------KCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 297
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIGKALQ 266
+++ +++ L ACA LGA+++G WIH YI++ + L +LIDMYAK G I A Q
Sbjct: 298 NDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQ 357
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF +M +KS+ +W MI G A+HG D+FSRM + ++P++ITF+ +LSAC H G
Sbjct: 358 VFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGK 417
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++LGR F M Y I PK+E YGCMIDLLG +G +EA+++++ MP E + IW SLL
Sbjct: 418 LDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLL 477
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A +G++EL E ++L+K+EP N G+Y +LSNIYA G W+E K+R ++ G+KK
Sbjct: 478 KACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKK 537
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+PGCS IE+ VHEF+ GD HP +Y
Sbjct: 538 VPGCSSIEIDSEVHEFIVGDKLHPRNREIY 567
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 218/376 (57%), Gaps = 5/376 (1%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
GF YA S+F +P+ ++NT ++ + +P++A+ LY + + L P++Y+FPF+L
Sbjct: 15 GFP-YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
K+ K E G++IH + G + D++V +LI MYA + DA KVFD S R +
Sbjct: 74 KSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR--D 131
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V + ++ GYA G++ +A+ +F+ + K+V+SW +I+GYA+ EA+ LF+ M
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
NV+PDE M+ LSACAQ +VELG +H++I+ +G + + + NALID+Y+K G++
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +FE + K V++W T+I G L +EAL +F M R+ PN++T ++IL AC H
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311
Query: 324 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
+G +++GR + I K + +ID+ + G ++ A ++ M + + W
Sbjct: 312 LGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSW 370
Query: 383 GSLLAASNIYGDVELG 398
+++ ++G G
Sbjct: 371 NAMIFGFAMHGRANAG 386
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 248/424 (58%), Gaps = 31/424 (7%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
N + +Y+++ ++ P+ +++P +++A IE G++IH + G +D + LI
Sbjct: 77 NCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLI 136
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY + + + AR+VFD + R ++N +SW
Sbjct: 137 HMYVNFQSLEQARRVFDNMPQR-------------------------------DRNSVSW 165
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+IA Y Q ++ +EA LF RM++ENV D+ + LSAC LGA+E G+WIH YIE+
Sbjct: 166 NAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK 225
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ L +IDMY K G + KA +VF + K + +W MI GLA+HG G A+++
Sbjct: 226 SGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIEL 285
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F MER V P+ ITF+ +LSAC H GLVE G+ YF M G++P +E +GCM+DLLG
Sbjct: 286 FKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLG 345
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L+EA KL+ MP +A + G+L+ A I+G+ ELGE + +I+LEPHNSG Y +
Sbjct: 346 RAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVL 405
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+YA GRW + K+RK+M D GVKK PG S IE V EF+AG +HP +Y
Sbjct: 406 LANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAK 465
Query: 479 LCKI 482
L +I
Sbjct: 466 LDEI 469
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N I A Q++ A L+++++ + D + +L A L +E G+ IH
Sbjct: 165 WNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIE 224
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
+G++ D + +I MY C C+ A +VF+EL + ++ WN M+ G A G
Sbjct: 225 KSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK--GISSWNCMIGGLAMHG----- 277
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+ AI LF+ M+ E V PD I + LSACA
Sbjct: 278 --------------------------KGEAAIELFKEMEREMVAPDGITFVNVLSACAHS 311
Query: 224 GAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTT 281
G VE G+ Y+ E GL + ++D+ ++G + +A ++ M N
Sbjct: 312 GLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGA 371
Query: 282 MIAGLALHG 290
++ +HG
Sbjct: 372 LVGACRIHG 380
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 7/229 (3%)
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+GY + I ++ RM ++V P++ + AC A+E G+ IH ++ ++G
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFS 300
N LI MY + +A +VF+NM ++++ ++W MIA EA +F
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
RM V ++ ++LSAC +G +E G ++ + + GIE + +ID+ +
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATTVIDMYCKC 245
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
G L++A ++ +P + + W ++ ++G GE A++ ++E
Sbjct: 246 GCLEKASEVFNELP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEME 290
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 269/459 (58%), Gaps = 2/459 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F S + +N+ I + A++L+ ++ + D ++ +L A K
Sbjct: 191 ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSK 250
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++LGR +H V TG++ D V ALI MYA C + A+ VFD++ + +V W
Sbjct: 251 HCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDK--DVVSWT 308
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+MV YA G + NA +F M KNV+SW ++I Q Q EA+ LF RM + V P
Sbjct: 309 SMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMP 368
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D+ +++ LS C+ G + LG+ H YI + V L N+LIDMYAK G + A+ +F
Sbjct: 369 DDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIF 428
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
M K+V++W +I LALHG G EA++MF M+ + + P+EITF +LSAC H GLV+
Sbjct: 429 FGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVD 488
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+GR YF+IM S + I P +E Y CM+DLLGR G+L EA L+++MP + + +WG+LL A
Sbjct: 489 MGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGA 548
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
IYG++E+ + ++ L++L NSG Y +LSN+Y+ RW++ KIRK+M D G+KK
Sbjct: 549 CRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCR 608
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
S+IE+ ++F+ D H +Y IL ++ +K
Sbjct: 609 AISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLK 647
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 217/474 (45%), Gaps = 76/474 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ GL L + + C G YA+ +F +P+ ++YN I+ +++P+ +
Sbjct: 62 IILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKS 121
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++L+ ++ ++ P+ ++FPFVLKA +H Q + G+ V A++
Sbjct: 122 LLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTA 181
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y +C+ I AR+VFD++S R + WN+M+AGY+K+G
Sbjct: 182 YVACRLILSARQVFDDISDR--TIVSWNSMIAGYSKMGFC-------------------- 219
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+EAI LF+ M V+ D +++ LSA ++ ++LG ++H YI G
Sbjct: 220 -----------DEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITG 268
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR------- 293
+ + NALIDMYAK G + A VF+ M +K V++WT+M+ A GL
Sbjct: 269 VEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFN 328
Query: 294 ------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
EA+++F RM + V P++ T ++ILS C + G + L
Sbjct: 329 HMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLAL 388
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G++ + I + +ID+ + G LQ A + MP E N W ++ A
Sbjct: 389 GKQAHCYICDNI-ITVSVTLCNSLIDMYAKCGALQTAIDIFFGMP-EKNVVSWNVIIGAL 446
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
++G GE A++ ++ SG Y +L + SG + DMG
Sbjct: 447 ALHG---FGEEAIEMFKSMQA--SGLYPDEITFTGLLSACSHSGLV-----DMG 490
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 2/162 (1%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + ID + G A IF + +V +N I AL A+ ++ +QAS
Sbjct: 407 LCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASG 466
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDA 130
L PD +F +L A +++GR + T + V A ++ + + +A
Sbjct: 467 LYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEA 526
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
+ ++ ++ +V VW ++ G+L A+ + + + E
Sbjct: 527 MTLIQKMPVKP-DVVVWGALLGACRIYGNLEIAKQIMKQLLE 567
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 284/476 (59%), Gaps = 8/476 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+S G ++ ++F PD++L+ I A +LY ++ +S + P+ ++F
Sbjct: 73 ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFS 132
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+LK+ + + G+ IH + GL D +V L+ +YA + A+KVFD + R
Sbjct: 133 SILKSC----STKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPER 188
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ M+ YAK G++ ARALF+ M E++++SW +I GY+Q P++A+ LF++
Sbjct: 189 --SLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 201 MQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+ + KPDEI ++AALSAC+Q+GA+E G WIH ++ + V + ALIDMY+K G
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAIL 318
+ +A+ VF + K ++ W MI G A+HG ++AL +F M+ ++P +ITFI L
Sbjct: 307 SLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTL 366
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
AC H GLV G + F M YGI+PKIE YGC++ LLGRAG L+ A ++++ M EA+
Sbjct: 367 QACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEAD 426
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ +W S+L + ++G+ LG+ ++LI NSG Y +LSNIYA++G + K+R +
Sbjct: 427 SVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNL 486
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M++ G+ K PG S IE+ +VHEF AGD H +Y +L K++ ++K ++ N
Sbjct: 487 MKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPN 542
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 124/273 (45%), Gaps = 38/273 (13%)
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
YA G + ++ ALF + ++ +T I + ++A L+ ++ + P+E
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ L +C + + G+ IH ++ ++GL + L+D+YAK G + A +VF+ M
Sbjct: 131 FSSILKSC----STKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMP 186
Query: 273 NKS-------------------------------VITWTTMIAGLALHGLGREALDMFSR 301
+S +++W MI G + HG +AL +F +
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 302 -MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+ + KP+EIT +A LSAC +G +E G R+ ++ + I ++ +ID+ +
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETG-RWIHVFVNSSRIRLNVKVCTALIDMYSKC 305
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G L+EA + P + W +++ ++G
Sbjct: 306 GSLEEAVLVFNDTP-RKDIVAWNAMITGYAMHG 337
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
LN L YA GKI +L +F + + +T I +++GL +A ++ ++ ++
Sbjct: 64 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQ 123
Query: 307 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ PNE TF +IL +C + G+ + +++K G++P + ++D+ + G +
Sbjct: 124 INPNEFTFSSILKSCS----TKSGKLIHTHVLKFGLGLDPYVAT--GLVDIYAKGGDVVS 177
Query: 366 AEKLLRRMP 374
A+K+ RMP
Sbjct: 178 AQKVFDRMP 186
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 288/488 (59%), Gaps = 9/488 (1%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL + SR + C+S +YAY +FT + + +++NT I+ ++ P
Sbjct: 48 LIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEM 107
Query: 60 AVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ ++ + S+ ++P ++P V KA L GR++H + + GL+ D + +
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTM 167
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ MY +C C+ +A ++F + + ++V WN+++ G AK G ++ A+ LF+ M ++N +S
Sbjct: 168 LHMYVTCGCLVEAWRLF--VGMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVS 225
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI- 236
W ++I+G+ + + +A+ +FR MQ +VKPD M++ L+ACA LGA E G WIH YI
Sbjct: 226 WNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIV 285
Query: 237 -EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ LN+IV ALIDMY K G + L+VFE K + W +MI GLA +G A
Sbjct: 286 RNRFELNSIVI--TALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGLANNGCEERA 343
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+D+F +ER ++P+ ++FI +L+AC H G V +F +M+ +Y IEP I+ Y CM++
Sbjct: 344 MDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVN 403
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+LG AG L EAE L+++MP E + IW SLLAA G+VE+ + A L L+P +
Sbjct: 404 VLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAKRAANCLKNLDPDETCG 463
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y ++SN YA G + E+ + R +M++ ++K GCS IEV VHEFV+ HP +
Sbjct: 464 YVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFVSCGKKHPKSTEI 523
Query: 476 YQILCKIN 483
Y +L +N
Sbjct: 524 YSLLGILN 531
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 162/391 (41%), Gaps = 72/391 (18%)
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ ST+ ++IH + TGL SD VA
Sbjct: 33 TRCSTMRELKQIHANLIKTGLISD--------------------------------TVAA 60
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVE 204
+ A D N A +F + KN W T+I G+++ P AI++F M
Sbjct: 61 SRVLAFCCASPSDRNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSP 120
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY--------- 255
+VKP + + A A LG G +H + + GL + N ++ MY
Sbjct: 121 SVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEA 180
Query: 256 ----------------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
AK G I +A ++F+ M ++ ++W +MI+G +G +
Sbjct: 181 WRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGC 352
+AL+MF M+ VKP+ T +++L+AC ++G E GR I+++R+ + +
Sbjct: 241 DALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIV--ITA 298
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 410
+ID+ + G +E K+ P + + W S++ G E L + LEP
Sbjct: 299 LIDMYCKCGCFEEGLKVFECAPTK-QLSCWNSMILGLANNGCEERAMDLFLELERTGLEP 357
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
+ +L+ A G +++G+ ++MR+
Sbjct: 358 DSVSFIGVLTAC-AHSGEVHKAGEFFRLMRE 387
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 268/450 (59%), Gaps = 35/450 (7%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
PD + NT ++ + +P A+ L+ + A PD +++P +L+A +L + G +
Sbjct: 86 PDPFSLNTVLRIAASSAHPRIALALHRRRLAP---PDTHTYPPLLQACTRLLALREGESL 142
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + GL + V V +L+ Y +C A +VFDE+
Sbjct: 143 HAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIP-------------------- 182
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+ E+N++SW +++ G+A +PNE +T+FR ++ PD +++ L+
Sbjct: 183 -----------VLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLT 231
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVI 277
ACA++GA+ LG +H + + GL + NALID+YAK G + A +VFE M ++V+
Sbjct: 232 ACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVV 291
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+WT++I GLA +G G++AL++F MER R+ P +IT + +L AC H GLV+ G RYFN M
Sbjct: 292 SWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEM 351
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
+ +YGI P IE GCM+DLLGRAG ++EA + MP E NA +W +LL A ++ +EL
Sbjct: 352 QDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLEL 411
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
GE A L++L+P +SG+Y +LSN+YA +GRW ++ +RK M GV+K PG S +E+
Sbjct: 412 GEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRN 471
Query: 458 RVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
V+EFV GD SHP+ D++YQ L +I +++
Sbjct: 472 SVYEFVMGDRSHPESDQIYQTLAEIAERLR 501
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 284/479 (59%), Gaps = 29/479 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN- 59
MI GL + + LSR + S++ F+ +A SIF H P ++LYNT I +L +
Sbjct: 32 MITTGLIFHTYPLSRILLISSTIVFT-HALSIFNHIPNPTIFLYNTLISSLANIKPHTHI 90
Query: 60 AVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG-TGLDSDVHVVAAL 117
A LY+++ + L+P+ ++FP + KA + GR +H + D V AAL
Sbjct: 91 AFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAAL 150
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ YA C + R +F+++S ++A WN++++ Y ++N+ A+ E
Sbjct: 151 LNYYAKCGKVGACRYLFNQISKP--DLASWNSILSAY-----VHNSGAICE--------- 194
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
+ E +TLF MQ +K +E+ ++A +SACA+LGA+ G W H Y+
Sbjct: 195 ---------DVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVL 245
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
++ L + ALIDMY+K G + A Q+F+ + ++ + + MI G A+HG G +ALD
Sbjct: 246 KHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALD 305
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F +M + P+++T + + +C HVGLVE G F MK YG+EPK+E YGC++DLL
Sbjct: 306 LFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLL 365
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L+EAE+ + MP + NA IW SLL A+ ++G++E+GE L+HLI+LEP SGNY
Sbjct: 366 GRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYV 425
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSN+YA + RW++ ++RK+M+D G+ K+PG S +EV +HEF+ GD +HP +Y
Sbjct: 426 LLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIY 484
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 142/331 (42%), Gaps = 47/331 (14%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
P+ S L+ + K T++ +++H + TGL + ++ ++
Sbjct: 4 PNPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRIL--------------- 48
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
+ +T+V +A ++F + + + TLI+ A +
Sbjct: 49 -----------LISSTIV--------FTHALSIFNHIPNPTIFLYNTLISSLANIKPHTH 89
Query: 194 -AITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNA 250
A +L+ R+ +KP+ + AC + G +H ++ ++ T P + A
Sbjct: 90 IAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAA 149
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH--------GLGREALDMFSRM 302
L++ YAK GK+G +F + + +W ++++ + L E L +F M
Sbjct: 150 LLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEM 209
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+++ +K NE+T +A++SAC +G + G + ++ ++ ++ +ID+ + G
Sbjct: 210 QKSLIKANEVTLVALISACAELGALSQG-AWAHVYVLKHNLKLNHFVGTALIDMYSKCGC 268
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
L A +L ++P + + +++ I+G
Sbjct: 269 LDLACQLFDQLPHR-DTLCYNAMIGGFAIHG 298
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 279/487 (57%), Gaps = 32/487 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + + + + + + G+ D + +F +K DV + I + + A+ +
Sbjct: 133 GLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECF 192
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++++S + D + VL A L + GR +H V +G
Sbjct: 193 VEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESG------------------ 234
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+V +W+V V + +V Y+K G ++A +F M +N++SW LIAG
Sbjct: 235 -------RV-------IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAG 280
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y Q ++ EA+ +F+ M +E ++P++ + +AL+ACAQLG+++ G W+H Y+++ L
Sbjct: 281 YVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLN 340
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
L AL+DMY+K G + +AL VFE + K V WT MI GLA+ G +L++FS+M R
Sbjct: 341 SKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIR 400
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+RV+PN +TF+ +LSAC H GLV+ G F +M Y +EP ++ YGCM+DLLGRAG L+
Sbjct: 401 SRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLE 460
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA K + MP E +WG+L + I+ ELGE HLIKL+PH+SG Y +L+N+Y+
Sbjct: 461 EAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYS 520
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
+W + +R++M+ GV K PGCS+IEV+ +HEF+A D SH + +Y +L ++
Sbjct: 521 RCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSA 580
Query: 485 QMKFAEH 491
Q+K A +
Sbjct: 581 QLKLATY 587
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
DL LF+ + + W T+I G++ QP + + R++ V PD L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLK 112
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A ++L E + +I ++GL+ + N+L+ +A G + + ++F K V++
Sbjct: 113 AFSKLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVS 171
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
WT +I G +G EAL+ F M + V+ +E+T +++L A + V GR
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + ++D+ + GY +A K+ MP N WG+L+A
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMP-TRNLVSWGALIAG 280
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/466 (38%), Positives = 262/466 (56%), Gaps = 37/466 (7%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
S G D A +F DV +N I Q+ A+ + ++Q + + P+ +
Sbjct: 205 SEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVS 264
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL A L ++ELG+ I G ++ +V AL+ MY+
Sbjct: 265 VLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYS------------------- 305
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
K G++ AR LF+ M +K+VI W T+I GY + EA+ LF M
Sbjct: 306 --------------KCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVM 351
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTI--VPLNNALIDMYAK 257
ENV P+++ LA L ACA LGA++LG+W+H YI++ G + V L ++I MYAK
Sbjct: 352 LRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAK 411
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + A QVF +M ++S+ +W MI+GLA++G AL +F M +P++ITF+ +
Sbjct: 412 CGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGV 471
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
LSAC G VELG RYF+ M YGI PK++ YGCMIDLL R+G EA+ L+ M E
Sbjct: 472 LSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEP 531
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
+ AIWGSLL A I+G VE GE + L +LEP NSG Y +LSNIYA GRW++ KIR
Sbjct: 532 DGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRT 591
Query: 438 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
+ D G+KK+PGC+ IE+ VHEF+ GD HP + ++++L +++
Sbjct: 592 KLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD 637
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 224/403 (55%), Gaps = 10/403 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIF--THKSKPDVYLYNTTIKALCQTDN 56
+I GL S+ I+ C+ D YA S+F H P+++++NT I+A T
Sbjct: 48 IIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPT 107
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
P +++ L++++ S L P++++FP + K+ K +++H + L HV +
Sbjct: 108 PTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTS 167
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI MY+ + AR VFD+ +LR + + ++ GY G +++AR LF+ + K+V+
Sbjct: 168 LIHMYSQVGELRHARLVFDKSTLR--DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVV 225
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SW +IAGY Q + EA+ F RMQ +V P++ M++ LSAC L ++ELG+WI +++
Sbjct: 226 SWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWV 285
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
G + L NAL+DMY+K G+IG A ++F+ M++K VI W TMI G L EAL
Sbjct: 286 RDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEAL 345
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGR---RYFNIMKSRYGIEPKIEQYGCM 353
+F M R V PN++TF+A+L AC +G ++LG+ Y + G + + +
Sbjct: 346 VLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSI 405
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
I + + G ++ AE++ R M + A+ W ++++ + G E
Sbjct: 406 IVMYAKCGCVEVAEQVFRSMGSRSLAS-WNAMISGLAMNGHAE 447
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 283/552 (51%), Gaps = 71/552 (12%)
Query: 6 LDQNNHLLSRFIDSCSSLGFS--------DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
L N +LL+ F+ +C+SL S ++A F D +L N+ I A
Sbjct: 45 LHSNLNLLTAFVTTCASLAASAKRPLAIINHARRFFNATHTRDTFLCNSMIAAHFAARQF 104
Query: 58 LNAVILYNKI--QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
L+ + QA PD Y+F ++K G +H + G+ D++V
Sbjct: 105 SQPFTLFRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGTLLHGMVLKNGVCFDLYVAT 164
Query: 116 ALIQMY-------------------------------ASCKCIYDARKVFDELS------ 138
AL+ MY A C + +AR++FDE+
Sbjct: 165 ALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDIVA 224
Query: 139 -----------------------LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+R NV W +MV+GY GD+ NA+ +F+LM EKNV
Sbjct: 225 FNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNV 284
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+W +I GY Q + ++A+ LFR MQ +V+P+E+ ++ L A A LGA++LG WIH +
Sbjct: 285 FTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRF 344
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ L+ + ALIDMYAK G+I KA FE M + +W +I G A++G +EA
Sbjct: 345 ALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNGCAKEA 404
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L++F+RM PNE+T I +LSAC H GLVE GRR+FN M+ R+GI P++E YGCM+D
Sbjct: 405 LEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAME-RFGIAPQVEHYGCMVD 463
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L EAE L++ MP++AN I S L A + DV E L+ ++K++ +GN
Sbjct: 464 LLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLRAERVLKEVVKMDEDVAGN 523
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L N+YA RW + ++++M+ G K CS IE+ EF AGD H + +
Sbjct: 524 YVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEIGGSFIEFAAGDYLHSHLEVI 583
Query: 476 YQILCKINGQMK 487
L +++ MK
Sbjct: 584 QLTLGQLSKHMK 595
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 280/523 (53%), Gaps = 68/523 (13%)
Query: 24 GFSDYAYSIFTHKSKP---DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
G + A ++F +P D + +NT I+ L P A++ + ++++ +RPD Y+FP
Sbjct: 59 GAAPLADAVFARLPEPAARDPFPWNTAIR-LHAPGRPRAALLYFARMRSCGVRPDAYTFP 117
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VLKA G +H + V GL +D+ V ALI Y RKVFDE
Sbjct: 118 AVLKACGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGV 177
Query: 141 VWNVAVWNTMVAGYAKVGDL---------------------------------NNARALF 167
++ WN+MVAGY G++ + AR LF
Sbjct: 178 SRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRARELF 237
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV--------------------- 206
+ MTE++++ W ++I GYA+ + +EA +LF M NV
Sbjct: 238 DQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALE 297
Query: 207 ----------KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
+PD +A + A+SACAQLGA+E G W+H+Y+E+ + + V + ALIDMY
Sbjct: 298 HFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYM 357
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G++ A+ +FE+M +SV+TW MI GL HG G +A+ +F RME RV ++++ +A
Sbjct: 358 KCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLA 417
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L+AC H GLV G F+ MK +GI+PK+E YG ++DLLGRAG L +A + MP E
Sbjct: 418 MLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPME 477
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
+WGSLLAA + VEL E +++ L L +SG Y +LSNIYA G W + +IR
Sbjct: 478 PTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIR 537
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K+M D G++K G S IEV +HEFV G SH D +Y +L
Sbjct: 538 KLMSDEGMRKDIGRSVIEVDGEIHEFVNGGGSHLCTDEIYLML 580
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 35/276 (12%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID + G D A S+F + +V ++ I + A+ + + +RPD
Sbjct: 251 MIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPD 310
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ + A +L +E GR +H + SDV V ALI MY C + A +F+
Sbjct: 311 RVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFE 370
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ R +V WN M+ G GY +A+
Sbjct: 371 SMPER--SVVTWNVMIVGLGT--------------------------HGYGL-----DAV 397
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDM 254
LF RM+ E V D++++LA L+AC G V G E H + +G++ V AL+D+
Sbjct: 398 MLFHRMEAERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDL 457
Query: 255 YAKSGKIGKALQVFENMKNKSVIT-WTTMIAGLALH 289
++G++ +A E M + W +++A H
Sbjct: 458 LGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSH 493
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 300/541 (55%), Gaps = 45/541 (8%)
Query: 5 GLDQNNHLLSRFID------SCSSLGFSDYAYSIFTHKSKPD--VYLYNTTIKALCQTDN 56
GLDQ L++ ++ S SL ++ A+ +F + D +++ N+ I+
Sbjct: 52 GLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGL 111
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A++LY ++ + P++Y+FPFVL K++ G ++H V GL+ DV +
Sbjct: 112 GREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNC 171
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA--------------------- 155
LI YA C + KVF+ +S R NV W +++ GYA
Sbjct: 172 LIHFYAECGHMDHGHKVFEGMSER--NVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMV 229
Query: 156 --------KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
K G ++ A+ LF+ ++N++ + T+++ YA+ EA+ + M + +
Sbjct: 230 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 289
Query: 208 PDEIAMLAALSACAQL-----GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
PD + ML+A+SA AQL G V G W+H YIE+ G+ + LN AL+DM+A+ G
Sbjct: 290 PDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQ 349
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A+QVF M + V WT I +A+ G G A +F++M VKP+ + F+ +L+AC
Sbjct: 350 SAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACS 409
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G VE G F++M+ +GI P+IE YGCM+DLLGRAG L+EA L++ MP E N +W
Sbjct: 410 HGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVW 468
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
GSLLAA ++ +VE+ A + + +L P +G + +LSNIYA G+W + ++R +R+
Sbjct: 469 GSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREK 528
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLES 502
GV+K+PG S ++V+ +HEF +GD SHP+ + +L ++N + A H+ + + +L+
Sbjct: 529 GVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDV 588
Query: 503 D 503
D
Sbjct: 589 D 589
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 178/437 (40%), Positives = 265/437 (60%), Gaps = 12/437 (2%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G D A +F DV + T I Q + A+ +Y + + + P+
Sbjct: 261 SKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIV 320
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
++ A + + G++ H V TG D + A +I YA+C I A F+ S
Sbjct: 321 DLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKD 380
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V+ WN +++G+ + G + AR LF+ M E++V SW+++I+GY+Q +QP+ A+ LF
Sbjct: 381 --HVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHE 438
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYA 256
M V+P+EI M++ SA A LG + G W H YI L+ +PLN+ ALIDMYA
Sbjct: 439 MVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYI----LSNSIPLNDNLNAALIDMYA 494
Query: 257 KSGKIGKALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
K G I ALQ+F ++++ SV W +I GLA+HG +L +FS+++R R+KPN ITF
Sbjct: 495 KCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITF 554
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
I +LSACCH GLV+ G +YF MK+ Y IEP I+ YGCMIDLLGRAG L+EA +++R+MP
Sbjct: 555 IGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMP 614
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
+A+ IWG+LLAA +G+VE+GE A ++L KL+ + +LSNIYA GRW+++
Sbjct: 615 MKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFL 674
Query: 435 IRKVMRDMGVKKMPGCS 451
+R+ M+ +KK PGCS
Sbjct: 675 VRRAMQSQRMKKSPGCS 691
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 228/508 (44%), Gaps = 84/508 (16%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N +L+ ++ S G D A +F Y T + L Q + L A+ ++ ++
Sbjct: 122 NIMLAGYVKS----GSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRF 177
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ + P+ + V+ A + I R +H + GL++ V L+ MY C + +
Sbjct: 178 AGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGN 237
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR +FDE+ R NV WN M+ GY+K G ++ AR LFE + K+V+SW T+I GY Q++
Sbjct: 238 ARVLFDEIPER--NVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIE 295
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------- 242
+ EA+ ++R M V P+E+ ++ +SAC + AV G+ H I + G +
Sbjct: 296 RLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQA 355
Query: 243 TIVPLN------------------------NALIDMYAKSGKIGKALQVFENMKNKSVIT 278
TI+ NALI + ++G I +A Q+F+ M + V +
Sbjct: 356 TIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFS 415
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W++MI+G + + AL +F M V+PNEIT +++ SA +G + GR +
Sbjct: 416 WSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYIL 475
Query: 339 SR-----------------------------YGIEPKIEQYG------CMIDLLGRAGYL 363
S Y I+ ++ C + + G A
Sbjct: 476 SNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVS 535
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE---CALQHLIKLEPHNSGNYAILS 420
+ L+R+ + N+ + +L+A G V+ GE +++L +EP N +Y +
Sbjct: 536 LKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEP-NIKHYGCMI 594
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMP 448
++ GR E+ ++ ++KMP
Sbjct: 595 DLLGRAGRLKEAAEM--------IRKMP 614
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 175/383 (45%), Gaps = 69/383 (18%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
LK+ L + G++IH +GL S++ V +LI Y C+ I +AR +FD S V
Sbjct: 59 LKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCS--VL 116
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ N M+AGY K G L+NAR LFE M K +S+TT++ G AQ + EAI +F+ M+
Sbjct: 117 DPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMR 176
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT--IVPLN------------ 248
V P+E+ + + +SA + +G + +H + GL IV N
Sbjct: 177 FAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLG 236
Query: 249 -----------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG-LALHG 290
N +++ Y+KSG + A +FE + K V++W T+I G + +
Sbjct: 237 NARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIER 296
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI-------------- 336
LG EAL M+ M R V PNE+ + ++SAC V G+++ I
Sbjct: 297 LG-EALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQA 355
Query: 337 ----------------MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
++ G + + + +I R G +++A +L MP E +
Sbjct: 356 TIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMP-ERDVF 414
Query: 381 IWGSLLAASNIYGDVELGECALQ 403
W S+++ Y E + ALQ
Sbjct: 415 SWSSMISG---YSQNEQPDLALQ 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 36/266 (13%)
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM--------------- 254
E+ +++AL +C+ L A+ G+ IH+ + + GL + + + N+LI
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 255 ----------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
Y KSG + A +FE M K +++TTM+ GLA + EA+ +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M A V PNE+T +++SA HVG + L R + + + G+E ++ +
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGI-LNCRMLHALSFKLGLEALNIVATNLVHMYC 230
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
L A L +P E N W +L + G V+L + ++ + ++
Sbjct: 231 VCSSLGNARVLFDEIP-ERNVVTWNVMLNGYSKSGLVDLARDLFE---RIPAKDVVSWGT 286
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGV 444
+ + Y + R E+ ++ + M GV
Sbjct: 287 IIDGYVQIERLGEALRMYRSMLRTGV 312
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/378 (45%), Positives = 246/378 (65%), Gaps = 6/378 (1%)
Query: 118 IQMYASCKC--IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
I + CK + A+ FD + + NV W M+ GY K GD N AR LF+ M KN+
Sbjct: 265 IMISGFCKAGELESAKDFFDRMPNK--NVISWGIMLDGYIKNGDTNGARCLFDQMPMKNL 322
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHN 234
++W+T+I GYA+ QP +A+ LF R + +++KPDE +L +SAC+QLG ++ E IHN
Sbjct: 323 VTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHN 382
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y+ L+ + + +LIDMYAK G I KALQ+FE K ++ ++TMIA LA HGLGR+
Sbjct: 383 YVGPSLLSDL-RVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRD 441
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ +F +M+RA +KP+ +TF+ +L+AC H GLV+ GR+YF M +GI+P + Y C++
Sbjct: 442 AIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVV 501
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGR G L+EA L+R MP ++ +WG+LLAA ++ +V+L E A L K+EP NSG
Sbjct: 502 DLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSG 561
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
NY +LSNIYA GRW K+R +R+ V+K G S+IE+S VHEFV GD SH D D
Sbjct: 562 NYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDS 621
Query: 475 LYQILCKINGQMKFAEHL 492
+ IL + MK + +L
Sbjct: 622 ISLILYLLCEDMKLSGYL 639
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 207/417 (49%), Gaps = 34/417 (8%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G +DYA+ +F ++P+ YL+ + I + A L+ +++ + N++
Sbjct: 46 SRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTIS 105
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VLKA+ +L+ + G+ ++ + G D+ V +++ ++ C+ + AR+ FDE+ +
Sbjct: 106 SVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEK 165
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN M++GY ++ AR F+ M E+NV+SWT++I GY + EA LF
Sbjct: 166 --DIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDS 223
Query: 201 MQVENVKPDEIAM---------LAALSACAQLGAVELGEW---IHNYIEQYGLNTI---- 244
M V+++ + + + A ++ + G W I + + L +
Sbjct: 224 MPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFF 283
Query: 245 --VPLNNA-----LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+P N ++D Y K+G A +F+ M K+++TW+TMI G A +G +AL+
Sbjct: 284 DRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALE 343
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG--IEPKIEQYGCMID 355
+F R + +KP+E + I+SAC +G+++ +I+ + G + + + +ID
Sbjct: 344 LFERFKEQDIKPDETFILGIISACSQLGIIDAAE---SIIHNYVGPSLLSDLRVFTSLID 400
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
+ + G +++A ++ M + + +++AA +G LG A+ K++ N
Sbjct: 401 MYAKCGSIEKALQMF-EMAHPKDLLCYSTMIAALANHG---LGRDAIFLFDKMQRAN 453
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 133/276 (48%), Gaps = 48/276 (17%)
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
V N ++ Y++ G + A +F+ +T+ N WT+LI GY + Q +EA +LF +M+ E
Sbjct: 37 VINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREP 96
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+ + + L A A+L + G+ ++ ++ +YG + + N+++D++ + K+ A
Sbjct: 97 ISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTAR 156
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
Q F+ M K +++W MI+G + +R
Sbjct: 157 QAFDEMCEKDIVSWNMMISG-------------YGNNDR--------------------- 182
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
V++ R++F+ M R + + MI +AG + EA+ L MP + + A W +
Sbjct: 183 -VDIARKFFDRMPER-----NVVSWTSMICGYVKAGDMAEAQVLFDSMPVK-DLASWNVM 235
Query: 386 LAASNIYGDVELGECALQHLI--KLEPHNSGNYAIL 419
++ G +++G+C +I K+ H++G++ I+
Sbjct: 236 VS-----GYMDIGDCVNARIIFGKMPIHDTGSWNIM 266
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 35/268 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G ++ A +F ++ ++T I + PL A+ L+ + + ++PD ++
Sbjct: 305 GDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGII 364
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L I+ I VG L SD+ V +LI MYA C
Sbjct: 365 SACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKC------------------- 405
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
G + A +FE+ K+++ ++T+IA A +AI LF +MQ
Sbjct: 406 --------------GSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQR 451
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
N+KPD + L L+AC G V+ G ++ E++G+ ++D+ + G +
Sbjct: 452 ANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLE 511
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALH 289
+A + NM + W ++A +H
Sbjct: 512 EAYNLIRNMPIAPHSVVWGALLAACRVH 539
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+ + ID + G + A +F D+ Y+T I AL +A+ L++K+Q +
Sbjct: 394 VFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRAN 453
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQ-TVGTGLDSDVHVVAALIQMYASCKCIYDA 130
++PD+ +F VL A ++ GR+ Q T G+ A ++ + C+ +A
Sbjct: 454 IKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEA 513
Query: 131 RKVFDELSLRVWNVAVWNTMVAG 153
+ + + +V VW ++A
Sbjct: 514 YNLIRNMPIAPHSV-VWGALLAA 535
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 263/415 (63%), Gaps = 15/415 (3%)
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYD---ARKVFDELSLRVWNVAVWNTMVAGYA 155
HCQ V G+ S +V ++ Y+ C + D A K+FDE+ + + +TM+ Y
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKC-VVGDLNLACKLFDEMPHK--DTVTLDTMITAY- 56
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+A +FELM EK++++W ++I G+A +PNEA+TL++RM E V+PD M++
Sbjct: 57 ----FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVS 112
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NK 274
LSACA+L + LG H Y+ + GLN + NNAL+D+YAK G I +A ++F+ M +
Sbjct: 113 LLSACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIER 172
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+V++WT++I GLA++G G+EAL+ F MER + P+EITF+ +L AC H G+V G YF
Sbjct: 173 NVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYF 232
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
MK +Y I P+IE YGCM+DLLGRAG L+EA ++ MP + NA IW +LL A I+G
Sbjct: 233 KRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGH 292
Query: 395 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
+ LG A L++LEP +SG+Y +LSN+YA RW++ ++R+ M GV+K PG S +E
Sbjct: 293 LGLGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVE 352
Query: 455 VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA---EHLQNEFSGVLESDVAS 506
+ VHEFV GD +HP + +Y++L ++ ++K A H N + + E + S
Sbjct: 353 LGNHVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKES 407
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 38/299 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
+ + AY +F + D+ +N+ I P A+ LY ++ + + PD ++ +L
Sbjct: 55 AYFESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLL 114
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L+T+ LGR H V GL+ ++H AL+ +YA C I +ARK+FDE+ +
Sbjct: 115 SACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGI---- 170
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
E+NV+SWT+LI G A EA+ F+ M+
Sbjct: 171 ----------------------------ERNVVSWTSLIVGLAVNGFGKEALEHFKDMER 202
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E + P EI + L AC+ G V G E+ EQY + + ++D+ ++G +
Sbjct: 203 EGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLK 262
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALHG-LGREALDMFSRMERARVKPNEITFIAILS 319
+A ++M + + W T++ +HG LG L F+R +++P + +LS
Sbjct: 263 EAYDYIQDMPLQPNAVIWRTLLGACTIHGHLG---LGAFARARLLQLEPKDSGDYVLLS 318
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 288/508 (56%), Gaps = 42/508 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKP-DVYLYNTTIKALCQTDNP---- 57
GL N+ +L+R + +S + D + S P D +L NT I+A +P
Sbjct: 49 GLHANSLVLTRLFAASASAAPALLDPLVTALLRPSVPLDAFLANTLIRA--HATSPIHSL 106
Query: 58 -LNAVILYNKIQASALRPDNYSFPFVLKAVVKL-STIELGREIHCQTVGTGLDSDVHVVA 115
L A + + A+ P+ ++FPF+LKA L + ++G + H + G +D +V
Sbjct: 107 RLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSN 166
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
LI MY SC G G L +AR +F+ M +++
Sbjct: 167 TLIHMY-SC--------------------------FGG----GFLGDARNVFDRMPKESA 195
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++W+ +I GY + ++A+ LFR MQ V+ DE+ ++ L+A LGA+EL W+ +
Sbjct: 196 VTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRF 255
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+E+ G+ V L NALID AK G + A+ VFE M+ +SV++WT++I LA+ G G+EA
Sbjct: 256 VEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEA 315
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F M+ A V P+++ FI +L+AC H G+V+ G YF+ MK YGIEPKIE YGCM+D
Sbjct: 316 VRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVD 375
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+ GRAG ++ A + +R MP + N IW SL++A +G +ELGE + L+ P + N
Sbjct: 376 MFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEAN 435
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN++A+ RW E +IR+ M G+KK+PGCS +E+ VHEF+AGD SHP + +
Sbjct: 436 YIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDI 495
Query: 476 YQILCKINGQMKFAEHLQNEFSGVLESD 503
Y+++ ++ +++ H+ +L+ D
Sbjct: 496 YRMVEEMARELRRVGHIAATSEVLLDLD 523
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 277/466 (59%), Gaps = 2/466 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI-QASALRPDNYSFPFV 82
G D A + F S+ D+ +N+ I Q A+ ++ I + ++L+PD +S
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L A L + G++IH V T D+ V ALI MYA + AR++ ++ +
Sbjct: 247 LSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V + ++ GY K+GD+ AR +F + + +V++WT +I GY Q N+AI +F+ M
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E +P+ + A LSA + + ++ G+ IH + G + NAL MYAK+G I
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSIN 426
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A +VF ++ N+ ++WT+MI LA HGLG EA+++F +M +KP+ IT++ +LSAC
Sbjct: 427 GARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC 486
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLVE GR YF++MK+ + I+P + Y CM+DL GRAG LQEA K + MP E +
Sbjct: 487 THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA 546
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
WGSLL++ +Y +V+L + A + L+ +EP+NSG Y+ L+N+Y+ G+W+++ KIRK+M+
Sbjct: 547 WGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKA 606
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
GVKK G S++++ + H F D HP D +Y+++ KI ++K
Sbjct: 607 RGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIK 652
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 195/410 (47%), Gaps = 42/410 (10%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F D + T I Q +A+ ++ + + P ++ VL +
Sbjct: 60 AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAA 119
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ +G+++H V GL + V V +L+ MYA + A+ VFD + LR N + WN
Sbjct: 120 TGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLR--NTSSWN 177
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR-MQVENVK 207
M++ + G ++ A A FEL++E++++SW ++IAG Q NEA+ F ++ ++K
Sbjct: 178 AMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLK 237
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--------- 258
PD ++ +ALSACA L + G+ IH YI + + + NALI MYAKS
Sbjct: 238 PDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRI 297
Query: 259 ------------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
G I A Q+F ++K+ V+ WT MI G +GL +
Sbjct: 298 IEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNND 357
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCM 353
A+++F M +PN T A+LSA V + G++ + + ++S + P + +
Sbjct: 358 AIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--AL 415
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
+ +AG + A K+ + + W S++ A +G LGE A++
Sbjct: 416 TTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG---LGEEAIE 462
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 158/303 (52%), Gaps = 37/303 (12%)
Query: 103 VGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
V GL V+++ L+ +YA DA +F+E+ ++ WNT+++GYAK G L
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKT--TFSWNTILSGYAKQGKLEK 59
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
A +F+L+ ++ +SWTT+I GY QM + +AI +F M + V P + + L++CA
Sbjct: 60 AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAA 119
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK---------- 272
G+ +G+ +H+++ + GL+ VP+ N+L++MYAK+G + A VF+ MK
Sbjct: 120 TGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAM 179
Query: 273 ---------------------NKSVITWTTMIAGLALHGLGREALDMFSR-MERARVKPN 310
+ +++W +MIAG HG EAL FS ++ +KP+
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Query: 311 EITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ + LSAC ++ + G++ I+++ + + +I + ++G ++ A ++
Sbjct: 240 RFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN--ALISMYAKSGGVEIARRI 297
Query: 370 LRR 372
+ +
Sbjct: 298 IEQ 300
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
LG A IF PDV + I Q +A+ ++ + + RP++++ +
Sbjct: 321 LGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAM 380
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L A ++++ G++IH + +G V AL MYA I ARKVF+ L
Sbjct: 381 LSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLR---- 436
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ +SWT++I AQ EAI LF +M
Sbjct: 437 ----------------------------QNRDTVSWTSMIMALAQHGLGEEAIELFEQML 468
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKI 261
+KPD I + LSAC G VE G + ++ + ++ + ++D++ ++G +
Sbjct: 469 TLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLL 528
Query: 262 GKALQVFENMK-NKSVITWTTMIA 284
+A + ENM VI W ++++
Sbjct: 529 QEAYKFVENMPMEPDVIAWGSLLS 552
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 284/514 (55%), Gaps = 61/514 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +GL+Q++ L+++FI + +S+ Y+ S+F P +L+N+ + C ++
Sbjct: 52 LIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDI 111
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY +++ PD Y+FP +LK + G +H + G+D D++V +L+ +
Sbjct: 112 ISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDIYVTTSLVNL 171
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWN--- 148
Y I ARKVFD +S R W NVA WN
Sbjct: 172 YGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPERNVASWNAII 231
Query: 149 ----------------------------TMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
TM+ GYAK GD+ +AR LF+ E+++I+W+
Sbjct: 232 GGYMKMGDVKSAEKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSA 291
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI+GY Q QPNEA+ F M NVKPD+ + + + AC+QLG ++L +W+ +Y +
Sbjct: 292 LISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCS 351
Query: 241 LNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
++ + ALIDM AK G + +A+ +FE M + +I++ +++ GL++HG G +A+ +F
Sbjct: 352 VDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF 411
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
RM + P+++ F IL+AC GLV+ G YF +M+ +Y + P ++ Y C++DLL R
Sbjct: 412 ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSR 471
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+G L+EA +L++ +P +++A WG+LL A +Y D EL E LI++EP N+GNY +L
Sbjct: 472 SGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLL 531
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
SNIYA RW + +R M + G++K+PGCS+I
Sbjct: 532 SNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI 565
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 67/346 (19%)
Query: 47 TIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELG-REIHCQTVGT 105
T + +T NP + V LY+ + A++KL + ++H +
Sbjct: 13 TTTSFAKTTNPKSNVSLYS-----------------ISALLKLCKTHIDLHQVHAHLIQK 55
Query: 106 GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA--VWNTMVAGY-AKVGDLNN 162
GL+ D +V I S I + VFD RV + + +WN++V+GY AK+
Sbjct: 56 GLEQDSFLVTQFISASNSVAHISYSTSVFD----RVLSPSTFLWNSLVSGYCAKL----- 106
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
Q + I+L+ RM+ E+ PD + L CA
Sbjct: 107 ---------------------------QFVDIISLYVRMKREDGAPDRYTFPSLLKVCAS 139
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
G + G +H I + G++ + + +L+++Y K G I A +VF+ M ++V++WT M
Sbjct: 140 EGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAM 199
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I G + G EA +F M V ++ AI+ +G V+ + F+ M
Sbjct: 200 IVGYSSIGNLVEAKRLFDLMPERNVA----SWNAIIGGYMKMGDVKSAEKAFDEMP---- 251
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
E + + MID +AG + A L ++ P E + W +L++
Sbjct: 252 -EKNVVSFTTMIDGYAKAGDMLSARNLFQKAP-ERDIIAWSALISG 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 88/238 (36%), Gaps = 42/238 (17%)
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ P L ++SA +L + +H ++ Q GL L I I
Sbjct: 19 KTTNPKSNVSLYSISALLKLCKTHIDLHQVHAHLIQKGLEQDSFLVTQFISASNSVAHIS 78
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC- 321
+ VF+ + + S W ++++G + + ++ RM+R P+ TF ++L C
Sbjct: 79 YSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCA 138
Query: 322 -----------------CHV-----------------GLVELGRRYFNIMKSRYGIEPKI 347
C V GL++ R+ F+ M R +
Sbjct: 139 SEGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSER-----NV 193
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ MI G L EA++L MP E N A W +++ GDV+ E A +
Sbjct: 194 VSWTAMIVGYSSIGNLVEAKRLFDLMP-ERNVASWNAIIGGYMKMGDVKSAEKAFDEM 250
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 278/491 (56%), Gaps = 11/491 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
+ LL R YA S+F S PD +L ++ T PL+ L+++I
Sbjct: 75 SRLLRRLAALPPPHAPLPYALSVFAALSPPDPFLAAALLRFALLTQPPLSPFHLFSRILR 134
Query: 70 SALRPDNYSFPFVLKAVVK----LSTIELGREIHCQT--VGTGLDSDVHVVAALIQMYAS 123
+A + PF + K ++ + H + VG G D V +LI Y +
Sbjct: 135 TARGGELPFLPFAFSPLAKSAAAARSLPAAQAAHAVSFLVG-GFDKHRFVENSLIGAYIA 193
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + ARKVFDE+ ++ +V W ++V Y++ D+ +A +F K++++WT ++
Sbjct: 194 CGDVGAARKVFDEMVVK--DVICWTSIVVAYSRSRDMGSAEEVFGQCPVKDMVAWTAMVT 251
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GYAQ P +A+ +F RM + DE+++ A+SACAQLGAV+ W+ E G
Sbjct: 252 GYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACAQLGAVKRAAWVQEIAEMNGFGM 311
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM- 302
V + + L+DMYAK G I +A +VF+ M+ K+V T+++M+ GLA HG REA+ +F M
Sbjct: 312 NVVVGSGLVDMYAKCGLIDEACKVFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMV 371
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
RA V PN +TFI +L+AC H G+V GR YF MK +YGI P + Y CM+DLLGRAG
Sbjct: 372 RRADVAPNHVTFIGVLTACSHAGMVTDGRYYFAQMKDKYGILPSADHYTCMVDLLGRAGL 431
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
+ EA L+R M E + +WG+LL A I+G E+ + A +HL KLEP GNY +LSN
Sbjct: 432 VDEALDLVRSMTVEPHGGVWGALLGACRIHGKTEVAKVAAEHLFKLEPEGIGNYVLLSNT 491
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQILCK 481
A G+W+E K+RKVMR +KK+P S+ E VH+F AGD SHP + + L +
Sbjct: 492 LAAAGKWDEVSKVRKVMRSRRLKKVPAVSWFEGRDGLVHQFFAGDNSHPRTREIKKALLE 551
Query: 482 INGQMKFAEHL 492
+ ++K A ++
Sbjct: 552 LVAKLKHAGYV 562
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 176/491 (35%), Positives = 286/491 (58%), Gaps = 6/491 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N ++S + G + A S+F + + + +NT I Q A
Sbjct: 408 MQVRSVSSWNVMVSLYTHQ----GRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMA 463
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +++ + AS++ PD ++ VL A L +++G+++H + TG+ ++ ALI
Sbjct: 464 LKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIS 523
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA + AR++ D+ + NV + ++ GY K+GD AR +F++M ++VI+WT
Sbjct: 524 TYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWT 583
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q Q +EA+ LFR M + +P+ + A LSACA L ++ G+ IH +
Sbjct: 584 AMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRS 643
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDM 298
V ++NA+I +YA+SG + A +VF+ + K ITWT+MI +A HGLG +A+ +
Sbjct: 644 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVL 703
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M R VKP+ IT++ +LSAC H G V+ G+RY+ M++ +GI P++ Y CM+DL
Sbjct: 704 FEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHA 763
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L EA + ++RMP + +WGSLLAA + + +L E A L+ ++PHNSG Y+
Sbjct: 764 RAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSA 823
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+Y+ GRWN++ +I K+ +D GVKK G S+ V +VH F A D HP D +Y+
Sbjct: 824 LANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRK 883
Query: 479 LCKINGQMKFA 489
++ ++K A
Sbjct: 884 AAEMWEEIKKA 894
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 201/427 (47%), Gaps = 44/427 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N LLS + S G A+ +F D + I L ++ +AV + + +
Sbjct: 285 NSLLSLYAKS----GRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVS 340
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
P ++ VL + + +GR++H V GL S V V +++ MY C
Sbjct: 341 EGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAET 400
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR VF+ + +R +V+ WN MV+ Y G + A ++FE M E++++SW T+IAGY Q
Sbjct: 401 ARAVFERMQVR--SVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458
Query: 190 QPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
A+ F RM +++PD + + LSACA L +++G+ +H+YI + G+ +
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIM 518
Query: 249 NALIDMYAKSG------------------------------KIG---KALQVFENMKNKS 275
NALI YAKSG K+G +A ++F+ M N+
Sbjct: 519 NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRD 578
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
VI WT MI G +G EA+++F M +PN T A+LSAC + ++ G++ +
Sbjct: 579 VIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQ-IH 637
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
R E + +I + R+G + A ++ ++ + W S++ A +G
Sbjct: 638 CKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHG-- 695
Query: 396 ELGECAL 402
LGE A+
Sbjct: 696 -LGEQAV 701
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 157/312 (50%), Gaps = 37/312 (11%)
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCK----CIYDARKVFDELSLRVWNVAVWNTM 150
GR IH V GL ++ L+ YAS C +AR +FD++ N WN++
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSL 287
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++ YAK G L +A +F M +++ +SWT +I G + + +A+ F M E P +
Sbjct: 288 LSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQ 347
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------- 257
+ LS+CA + A +G +H ++ + GL++ VP+ N+++ MY K
Sbjct: 348 FTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 407
Query: 258 ------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G++ A+ +FENM +S+++W T+IAG +GL AL F
Sbjct: 408 MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFF 467
Query: 300 SRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
SRM A ++P+ T ++LSAC ++ ++++G++ + + R G+ + +I
Sbjct: 468 SRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYIL-RTGMPCSSQIMNALISTYA 526
Query: 359 RAGYLQEAEKLL 370
++G ++ A +++
Sbjct: 527 KSGSVETARRIM 538
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 290/512 (56%), Gaps = 42/512 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS--DYAYSIFTHKSKP-DVYLYNTTIKALCQTDNP 57
++ GL N+ +L+R + +S + D + S P D +L NT I+A +P
Sbjct: 45 LLKSGLHANSLVLTRLFAASASAAPALLDPLVAALLRPSVPLDAFLANTLIRA--HATSP 102
Query: 58 -----LNAVILYNKIQASALRPDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDV 111
L A + + A+ P+ ++FPF+LKA L + ++G + H + G +D
Sbjct: 103 IHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQ 162
Query: 112 HVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT 171
+V LI MY SC G G L +AR +F+ M
Sbjct: 163 YVSNTLIHMY-SC--------------------------FGG----GFLGDARNVFDRMP 191
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
+++ ++W+ +I GY + ++A+ LFR MQ V+ DE+ ++ L+A LGA+EL W
Sbjct: 192 KESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARW 251
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+ ++E+ G+ V L NALID AK G + A+ VFE M+ +SV++WT++I LA+ G
Sbjct: 252 VRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGR 311
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
G+EA+ +F M+ A V P+++ FI +L+AC H G+V+ G YF+ MK YGIEPKIE YG
Sbjct: 312 GKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYG 371
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
CM+D+ GRAG ++ A + +R MP + N IW SL++A +G +ELGE + L+ P
Sbjct: 372 CMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPA 431
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
+ NY +LSN++A+ RW E +IR+ M G+KK+PGCS +E+ VHEF+AGD SHP
Sbjct: 432 HEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQ 491
Query: 472 FDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+ +Y+++ ++ +++ H+ +L+ D
Sbjct: 492 YKDIYRMVEEMARELRRVGHIAATSEVLLDLD 523
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 273/483 (56%), Gaps = 10/483 (2%)
Query: 11 HLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
HL + + + ++LG D+A +F + + +A + A+ ++ + A
Sbjct: 47 HLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVAD 106
Query: 71 ALRPDNYSFPFVLKAVVKLSTIEL----GREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ PDN + L A + G++IH V +G++ DV V LI++Y C
Sbjct: 107 GVFPDNVALAVALGACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGK 166
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ +R+VFD++ R + WN M+ YA+ G ++ A LF M ++V+SW T++AGY
Sbjct: 167 LAVSRRVFDDMPSR--STITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYC 224
Query: 187 QMDQPNEAITLFRRMQVEN---VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
+ EA+ LFR+M + V P+ M L ACA G +E G W+H YIE+ +N
Sbjct: 225 VAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMND 284
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRM 302
L+ LIDMY K G I ALQVFE + + + +WTT+I GLA+HG +AL MF M
Sbjct: 285 DGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMM 344
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ + P+++T + +L+AC H GLV+ G YF M++++ I PKIE YGCMIDLLGR G
Sbjct: 345 QDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGR 404
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA ++R MP + N IWG+ L+A ++G++ELG+ A + L +L+P + +LS++
Sbjct: 405 LQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSM 464
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA W + R+ M M VKK PGCS IE+ VHEFVAG + HP + + +L +
Sbjct: 465 YAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDV 524
Query: 483 NGQ 485
Q
Sbjct: 525 EAQ 527
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/490 (36%), Positives = 286/490 (58%), Gaps = 8/490 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M V+ + N L+S ++ S G + A S F D+ +N+ I Q L A
Sbjct: 203 MTVKNISTWNALISLYMQS----GQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEA 258
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+++++K + +L+PDN++ +L A L + +G++IH + ++ V ALI
Sbjct: 259 LVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALIS 318
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA + AR + + N+ + +++ GY K+G++ AR +F + +++V++WT
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q N+A+ LFR M E +P+ + A LS + L +E G+ IH +
Sbjct: 379 AMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKA 438
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALD 297
G ++ + NALI MYAK+G I A +VF+ N K K +++WT+MI LA HGLG+EA++
Sbjct: 439 GESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGK-KEIVSWTSMIMALAQHGLGKEAIN 497
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F RM +KP+ IT++ +LSAC HVGLVE GR+Y+N+M + IEP + Y CMIDL
Sbjct: 498 LFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLY 557
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG LQEA + MP E + WGSLLA+ I+ + +L + A + L+ ++P NSG Y
Sbjct: 558 GRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYL 617
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
L+N+Y+ G+W + + RK+M+D GV+K G S+I + VH F D HP D +Y+
Sbjct: 618 ALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYK 677
Query: 478 ILCKINGQMK 487
++ +I ++K
Sbjct: 678 LMAEIWEEIK 687
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 187/370 (50%), Gaps = 39/370 (10%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
NA+ ++ K+ + + P ++ VL + T+++GR+IH V GL S V V +L+
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA C A+ VFD ++++ N++ WN +++ Y + G A + FE M +++++SW
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVK--NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
++I+GY+Q EA+ +F +M E ++KPD + + LSACA L + +G+ IH YI
Sbjct: 243 NSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 238 QYGLNTIVPLNNALIDMYAKSG------------------------------KIGK---A 264
+ T + NALI MYAKSG K+G A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F ++++ V+ WT MI G +GL +AL++F M +PN T A+LS +
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSL 422
Query: 325 GLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
++E G++ + + +K+ P + +I + + G + A+++ + W
Sbjct: 423 TILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480
Query: 384 SLLAASNIYG 393
S++ A +G
Sbjct: 481 SMIMALAQHG 490
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 34/286 (11%)
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
F +L+ V++ GR +HCQ + GL V+++ L+ YA + A VFDE+
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
L+ + WNT+++GYAK G+ +R L M + + +SWT +I GY Q + AI +F
Sbjct: 73 LK--STFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK- 257
+M E V P + + LS+CA +++G IH+++ + GL + VP+ +L++MYAK
Sbjct: 131 AKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKC 190
Query: 258 ------------------------------SGKIGKALQVFENMKNKSVITWTTMIAGLA 287
SG+ A FE M ++ +++W +MI+G +
Sbjct: 191 GDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYS 250
Query: 288 LHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 332
G EAL +FS+M +KP+ T +ILSAC ++ + +G++
Sbjct: 251 QQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 175/470 (37%), Positives = 276/470 (58%), Gaps = 42/470 (8%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDN-----PLNAVILYNK-IQASALRPDNYSFPF 81
YA ++F +P + YN+ I+A+ + + + +LY + + A + P++++ F
Sbjct: 76 YARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAF 135
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VLKA L G+++H Q G GL+ +V L+ +YA C+ + AR VFD +
Sbjct: 136 VLKACTALGE---GQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGM---- 188
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ +KN+++W+++I GY++M NEA+ LFR M
Sbjct: 189 ----------------------------VEDKNLVAWSSMIGGYSRMGMVNEALGLFRDM 220
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
Q V PDE+ M++ +SACA+ GA++LG+W+H +I++ G+ + L+ ALIDMYAK G I
Sbjct: 221 QAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLI 280
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A VF++M + W+ MI GLA+HGL +AL +FSRM + +V+PN +TF+ +LSAC
Sbjct: 281 ERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSAC 340
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV+ GRRY+ M+ GIE +E YGCM+DLL R+G L EA + MP N+ I
Sbjct: 341 AHSGLVDDGRRYWCTMQE-LGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVI 399
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W +LL AS +++ E A + L +LEP N NY +LSN+YA+ +W+ +RK M+D
Sbjct: 400 WRNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKD 459
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
V + GCS IE++ +H+FV D SHP+ ++ +L +I ++ A H
Sbjct: 460 NNVTVVAGCSSIEINGYLHKFVVSDGSHPEIKKIRLVLREIADRVLCAGH 509
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 98/241 (40%), Gaps = 17/241 (7%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+G+ + L + ID + G + A S+F + D ++ I L +A+ L
Sbjct: 258 KGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGL 317
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++++ +RP+N +F VL A ++ GR C G+++ + ++ +
Sbjct: 318 FSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQELGIEASMENYGCMVDLLCR 377
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLN----NARALFELMTEKNVISWT 179
+ +A + + N +W ++ ++ +R LFEL +N ++
Sbjct: 378 SGLLDEAFSFVTGMPISP-NSVIWRNLLVASKSSNRIDIVELASRRLFEL-EPQNPENYV 435
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
L YA Q + + ++M+ NV + A ++E+ ++H ++
Sbjct: 436 LLSNLYALNSQWDRVRYMRKKMKDNNV-----------TVVAGCSSIEINGYLHKFVVSD 484
Query: 240 G 240
G
Sbjct: 485 G 485
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 292/494 (59%), Gaps = 18/494 (3%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
DQ+ ++ I CS+L DYAY +F + S P+VYLY I + + V LY++
Sbjct: 58 DQDAFVVFELIRVCSTLDSIDYAYDVFRYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ S++ PDNY V+ +V+K ++ REIH Q + G S V L+++Y
Sbjct: 118 MIHSSVLPDNY----VITSVLKACGLDECREIHSQVLKLGFGSSRSVGLKLMEIYGKSGE 173
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ DA+KVFDE+ R + V M+ Y++ G + A LF+ + K+ + WT +I G
Sbjct: 174 LADAKKVFDEMPDR--DQVVATVMINCYSECGCIKEALELFQDVKIKDTVCWTAMIDGLV 231
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-ELGEWIHNYIEQYGLNTIV 245
+ + N+A+ LFR MQ L+ A++ G +H+++E +
Sbjct: 232 RNREMNKALELFREMQ-----------LSVFYLPARIWVRWSSGAGVHSFVENQKMELSN 280
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+ NALI+MY++ G I A +VF+ M++K VI++ TMI+GLA+HG EA+++F M
Sbjct: 281 FVGNALINMYSRCGDINVAKRVFKGMRDKDVISYNTMISGLAMHGASVEAINVFRDMVNR 340
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+PN++T +A+L+AC H GL+++G FN M + +EP+IE YGC++DLLGR G L+E
Sbjct: 341 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVFSVEPQIEHYGCIVDLLGRVGRLEE 400
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A + + M E + + G+LL+A I+G++ELGE + L + E +SG Y +LS+IYA
Sbjct: 401 AYRFIENMLIEPDHIMLGALLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSHIYAS 460
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
G+W ES +IR+ MR+ G++K PGCS IEV ++HEF GD +HP + +YQ L ++N
Sbjct: 461 SGKWKESTEIRESMRESGIEKEPGCSTIEVDNQIHEFHVGDIAHPRKEAIYQRLQELNRN 520
Query: 486 MKFAEHLQNEFSGV 499
++F E+ + +G+
Sbjct: 521 LRFKENETDIITGL 534
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 136/350 (38%), Gaps = 89/350 (25%)
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
IH + + T D D VV LI++ ++ I
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSI------------------------------ 77
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
+ A +F ++ NV +T +I G+ + + ++L+ RM +V PD + + L
Sbjct: 78 ---DYAYDVFRYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVL 134
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
AC G E E IH+ + + G + + L+++Y KSG++ A +VF+ M ++ +
Sbjct: 135 KAC---GLDECRE-IHSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQV 190
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
T MI + G +EAL++F + I C
Sbjct: 191 VATVMINCYSECGCIKEALELFQD-------------VKIKDTVC--------------- 222
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIYGD 394
+ MID L R + +A +L R M F A IW + + ++
Sbjct: 223 ------------WTAMIDGLVRNREMNKALELFREMQLSVFYLPARIWVRWSSGAGVHSF 270
Query: 395 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
VE + L + + GN I N+Y+ G N + ++ K MRD V
Sbjct: 271 VENQKMELSNFV-------GNALI--NMYSRCGDINVAKRVFKGMRDKDV 311
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 278/488 (56%), Gaps = 6/488 (1%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
IV GL +L + I G A+ +F PD+ +N I + L A+
Sbjct: 90 IVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAM 149
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH--CQTVGTGLDSDVHVVAALIQ 119
L++++ L PD ++ +L + +L ++ G+ +H + + S++ + AL+
Sbjct: 150 RLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLD 209
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C+ + A + F L + ++ WN +VAG AKVG+L AR F M ++++SW
Sbjct: 210 MYVKCQKVELALRTFGALKEK--DIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWN 267
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+L+ GYA L M +E V PD + M++ +SA + GA++ G W H ++ +
Sbjct: 268 SLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRM 327
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ L +ALIDMY K G I +A +VF+ + K V WTTMI GLA HG G +AL++F
Sbjct: 328 QIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELF 387
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
S M+ V P+++TF+++LSAC H GLV+ G + F+ M + YGIEP +E YGC++DLL R
Sbjct: 388 SEMQE-DVSPDDVTFVSVLSACSHSGLVDQGIKVFSSM-TDYGIEPGVEHYGCLVDLLAR 445
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+G L EA+ ++ +MP + + +IWG++L A GDVEL E A + L+ L+P G Y +L
Sbjct: 446 SGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLL 505
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIYA GRW+ S KIR+ M GVKK GCS + V VH F++ D HP + + IL
Sbjct: 506 SNIYAASGRWSYSKKIRETMESRGVKKTAGCSSVVVDGVVHNFISADKCHPGWVDISSIL 565
Query: 480 CKINGQMK 487
+ +MK
Sbjct: 566 NCLKNEMK 573
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 219/479 (45%), Gaps = 83/479 (17%)
Query: 13 LSRFI--DSCSSLGFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
+SRFI + S D A ++F H P++++YNT I A + + LYN + +
Sbjct: 1 MSRFIYFSAVSHPDNLDLAITLFNHFTPNPNLFIYNTLISAFSSLKK-IESFYLYNVLLS 59
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
S PD + ++L+AV +S + ++IHCQ + TGL S ++ LI++Y +
Sbjct: 60 SGECPDKQTLLYLLQAVNFISQV---KQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRL 116
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A +VF+++ ++ +N M+ GYAK G F L
Sbjct: 117 AHQVFEKMPSP--DIVSFNVMIVGYAKKG--------FGL-------------------- 146
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPL 247
EA+ LF M ++PDE +L L +C QLG V+ G+ +H ++E+ +++ + L
Sbjct: 147 ---EAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLIL 203
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM----- 302
NAL+DMY K K+ AL+ F +K K +++W ++AG A G +A F +M
Sbjct: 204 GNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDI 263
Query: 303 --------------ERARVK------------PNEITFIAILSACCHVGLVELGRRYFNI 336
+ A VK P+ +T I+++SA G ++ G R+ +
Sbjct: 264 VSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQG-RWAHG 322
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
R I+ +ID+ + G ++ A ++ + + + + +W +++ +G
Sbjct: 323 WVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEIN-KKDVTVWTTMITGLAFHG--- 378
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAIL---GRWNESGKIRKVMRDMGVKKMPGCSY 452
G AL+ +++ S + ++ + G ++ K+ M D G++ PG +
Sbjct: 379 YGSKALELFSEMQEDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIE--PGVEH 435
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 275/479 (57%), Gaps = 9/479 (1%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY---NKIQASALRPDNYSF 79
LG D A S+F + + +N I Q N LNA L+ + S + PD ++
Sbjct: 241 LGRMDLALSLFENMPDRTIVSWNAVIAGYNQ--NGLNAKALWFFSRMLSYSTMAPDEFTI 298
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
VL A L + +G+++H + + + V ALI MYA + +AR V + +
Sbjct: 299 TSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVM 358
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
NV + ++ GY K+GD+ +AR +F++M+ ++V++WT +I GY Q +EA+ LFR
Sbjct: 359 ADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFR 418
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M +P+ + A LS CA L +E G+ IH + ++N+++ MYA+SG
Sbjct: 419 LMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSG 478
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
+ A +VF+ + K +TWT+MI LA HGLG +A+ +F M R VKP+ ITF+ +L
Sbjct: 479 SLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVL 538
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
SAC HVG V+ G+RYF ++ ++GI P++ Y CM+DLL RAG EA++ +++MP E +
Sbjct: 539 SACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPD 598
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
A WGSLL+A ++ + +L E A + L+ ++P NSG Y+ LSN+Y+ GRWN++ KI K
Sbjct: 599 AIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKR 658
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQN 494
+D VKK G S+ + RVH F A D HP D +Y+ K+ +K F LQ+
Sbjct: 659 RKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQS 717
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 198/427 (46%), Gaps = 44/427 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N LLS + S G A ++F + D + + L + A+ ++ +
Sbjct: 100 NSLLSLYAKS----GRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVT 155
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
L P ++ VL + +GR++H V GL S V V +++ MY C
Sbjct: 156 DGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAET 215
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR VF+ + R +V+ WN MV+ A +G ++ A +LFE M ++ ++SW +IAGY Q
Sbjct: 216 ARAVFERMPER--SVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273
Query: 190 QPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+A+ F RM + PDE + + LSACA LG V +G+ +H YI + + I +
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333
Query: 249 NALIDMYAKSG------------------------------KIGK---ALQVFENMKNKS 275
NALI MYAKSG K+G A ++F+ M N+
Sbjct: 334 NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V+ WT MI G +G EA+++F M R+ +PN T A+LS C + +E G++ +
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQ-IH 452
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
R E ++ + R+G L A ++ R+ + W S++ A +G
Sbjct: 453 CKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG-- 510
Query: 396 ELGECAL 402
LGE A+
Sbjct: 511 -LGEDAV 516
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 171/317 (53%), Gaps = 42/317 (13%)
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCKC-----IYDARKVFDELSLRVWNVAVWNT 149
GR IH + V GL + ++ L+ YA +AR++FDE+ NV WN+
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+++ YAK G L +ARA+F M E++ +SWT ++ G ++ + EAI +F M + + P
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS----------- 258
+ + LS+CA A +G +H+++ + GL++ VP+ N++++MY K
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221
Query: 259 --------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G++ AL +FENM ++++++W +IAG +GL +AL
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWF 281
Query: 299 FSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY-GCMID 355
FSRM + + P+E T ++LSAC ++G+V +G++ + I++SR P I Q +I
Sbjct: 282 FSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRM---PYIGQVTNALIS 338
Query: 356 LLGRAGYLQEAEKLLRR 372
+ ++G ++ A ++++
Sbjct: 339 MYAKSGSVENARGVMQQ 355
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 186/498 (37%), Positives = 285/498 (57%), Gaps = 13/498 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
+DQ+ + R + ++ G D A ++ P Y + I A A+ L +
Sbjct: 52 VDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLS 111
Query: 66 KIQAS--ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++ S L P ++ L A + +GR +H V L + +V AL+ MYA
Sbjct: 112 EMLLSRHGLLPTAHTLSASLPAC---GCLAVGRALHGYAVKLALSGEPYVATALLGMYAR 168
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
AR +FD + V+V M++ YAK+G L++AR LF+ + K+++ W ++
Sbjct: 169 AGEAAAARALFDGMRPDPHVVSV-TAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMD 227
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q +P+EA+ LFR+M V+PDE++++ ALSA AQLG E G W+H+++ G
Sbjct: 228 GYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRA 287
Query: 244 IVPLN----NALIDMYAKSGKIGKALQVFENMK---NKSVITWTTMIAGLALHGLGREAL 296
V LN AL+DMY K G + +A+ VF ++ ++ V+ W MI G A+HG REAL
Sbjct: 288 RVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREAL 347
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+ F ++ + P +ITFI +L+AC H GLV+ GR F M+ YGI PK+E YGCM+DL
Sbjct: 348 EAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDL 407
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG ++EA L++ M + +AA+W SLL A ++ ++ LG+ +L+ NSG Y
Sbjct: 408 LGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTY 467
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSN+YA G+W E G++R +MR GV+K PGCS +EV +RV EFVAGD SHP +Y
Sbjct: 468 VLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIY 527
Query: 477 QILCKINGQMKFAEHLQN 494
L ++N + H+ +
Sbjct: 528 AKLEEVNSIARARGHVPH 545
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 262/451 (58%), Gaps = 33/451 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + +N I Q + I++ ++Q P+ + VL K
Sbjct: 181 ARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAK 240
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L +E+G I L S++ V A+++MY C
Sbjct: 241 LGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKC------------------------ 276
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G +++ R +F+ M ++V++W+ +IAGYAQ + NEA+ LF M+ +KP
Sbjct: 277 ---------GAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKP 327
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+++ +++ LSACAQLG+VE GE I +Y+E GL + V + +AL+ MY+K G I KA Q+F
Sbjct: 328 NDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIF 387
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ + + +TW +MI GLA++G +A+ +++RM+ VKPN ITF+ +++AC H G VE
Sbjct: 388 DKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVE 447
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
LG +F M+S + I P IE + C++DL R+G L +A + + RM E N IWG+LL+A
Sbjct: 448 LGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSA 507
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S I+ +VEL E A + L++LEP NSGNY ILSNIYA GRW E+ K+RK+M+D V+K
Sbjct: 508 SRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAA 567
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
S++EV RVH+F+ GDTSHP D +Y +
Sbjct: 568 AYSWVEVEDRVHKFLVGDTSHPRSDEVYSTI 598
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 204/381 (53%), Gaps = 4/381 (1%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
FI + F YA +F PD ++ + I A + A+ + + + +R
Sbjct: 36 FIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIV 95
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ P + K+ L I++G+++H + G S V ALI YA + A +FD
Sbjct: 96 CFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFD 155
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ V + +N +++ Y++ G++ AR LF+ M +++++SW +I+ YAQ ++
Sbjct: 156 --GILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGW 213
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F+RMQ E +P+EI + LS CA+LG +E+G I + L + + ++ A+++MY
Sbjct: 214 IIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMY 273
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K G + VF++M + V+TW+ MIAG A +G EAL++F M+ A++KPN++T +
Sbjct: 274 VKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLV 333
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
++LSAC +G VE G R + ++SR G+ + ++ + + G + +A ++ ++P
Sbjct: 334 SVLSACAQLGSVETGERIGSYVESR-GLISNVYVASALLGMYSKCGNIIKARQIFDKLPQ 392
Query: 376 EANAAIWGSLLAASNIYGDVE 396
N W S++ I G E
Sbjct: 393 RDNVT-WNSMIMGLAINGFAE 412
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 3 VRGLDQNNHLLSRFIDSCSSL------GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
++ L+ N +L S I S + L G D +F H ++ DV ++ I Q
Sbjct: 250 IKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGR 309
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A+ L+ ++++ ++P++ + VL A +L ++E G I GL S+V+V +A
Sbjct: 310 SNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASA 369
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ MY+ C I AR++FD+L R + WN+M+ G A
Sbjct: 370 LLGMYSKCGNIIKARQIFDKLPQR--DNVTWNSMIMGLA--------------------- 406
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNY 235
I G+A+ +AI L+ RM+ VKP+ I + ++AC G VELG E+ +
Sbjct: 407 -----INGFAE-----DAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSM 456
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ ++ + ++D++ +SG++ A + M+ +V+ W T+++ +H
Sbjct: 457 RSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIH 511
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 288/497 (57%), Gaps = 9/497 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ ++++ + + ++LG + + +F + DV +N I + +A+ ++
Sbjct: 60 GLESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVF 119
Query: 65 NKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++ + S L+ D + L A L +E+G I+ + V T + V AL+ M+
Sbjct: 120 QRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIY-RYVVTEFEMSVRTGNALVDMFCK 178
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C+ AR +FD S+R NV W +MV+GY G + AR LFE K+V+ WT ++
Sbjct: 179 CGCLDKARAIFD--SMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMN 236
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q ++ +EA+ LFR MQ ++PD +++ L+ CAQ GA+E G+WIH YI + +
Sbjct: 237 GYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTV 296
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ AL+DMYAK G I AL VF MK + +WT++I GLA +G+ ALD++ ME
Sbjct: 297 DKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEME 356
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
V+ ++ITF+A+L+AC H G V GRR F M R+ I+PK E Y C+IDLL RAG L
Sbjct: 357 NVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLL 416
Query: 364 QEAEKLLRRMPFEANAA---IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
EAE+L+ +M E + ++ SLL+A+ YG+V++ E + L K+E +S + +L+
Sbjct: 417 DEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLA 476
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD--TSHPDFDRLYQI 478
++YA RW + +R+ M+D+G++K PGCS IEV HEF+ G+ +SHP D + +
Sbjct: 477 SVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVSHEFIVGNDPSSHPKMDEINSM 536
Query: 479 LCKINGQMKFAEHLQNE 495
L + M EH + E
Sbjct: 537 LHQTTHLMLDLEHEEIE 553
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 184/373 (49%), Gaps = 72/373 (19%)
Query: 48 IKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL 107
+K+L ++ + + L+ +++ L PDN++ P VLK++ +L + G ++H V TGL
Sbjct: 2 LKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGL 61
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
+SD +V +L+ MYA+ + KVFDE+ R +V WN +++ Y G +
Sbjct: 62 ESDSYVCNSLMGMYAALGKMEITHKVFDEMPER--DVVSWNGLISSYVGHGRFED----- 114
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAV 226
AI++F+RM E N+K DE +++ LSAC+ L +
Sbjct: 115 --------------------------AISVFQRMSRESNLKADEGTIVSTLSACSVLKNL 148
Query: 227 ELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
E+GE I+ Y + ++ ++ V NAL+DM+ K G + KA +F++M++K+V WT+M++G
Sbjct: 149 EIGERIYRYVVTEFEMS--VRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSG 206
Query: 286 LALHGLGREALDMFSR-------------------------------MERARVKPNEITF 314
+G EA ++F R M+ AR++P+
Sbjct: 207 YVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVL 266
Query: 315 IAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+++L+ C G +E G+ I ++R ++ + ++D+ + G ++ A + M
Sbjct: 267 VSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGT--ALVDMYAKCGCIETALGVFYEM 324
Query: 374 PFEANAAIWGSLL 386
E + A W SL+
Sbjct: 325 K-ERDTASWTSLI 336
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
++ A+ + + LF ++ + + PD + L + +L V GE +H Y + G
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L + + N+L+ MYA GK+ +VF+ M + V++W +I+ HG +A+ +F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 301 RMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
RM R + +K +E T ++ LSAC + +E+G R + + + + E + ++D+ +
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEF--EMSVRTGNALVDMFCK 178
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G L +A + M + N W S+++
Sbjct: 179 CGCLDKARAIFDSMR-DKNVKCWTSMVSG 206
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 283/499 (56%), Gaps = 3/499 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL N +++ +D G D A +F ++ LYNT + + A+ +
Sbjct: 262 GLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAIL 321
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ RPD + + A +L + G+ H + GL+ + +I MY C
Sbjct: 322 DEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKC 381
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
A +VFD +S + V WN++ AG+ + GD+ +A +F + E+N + W T+I+G
Sbjct: 382 GKPEMACRVFDLMSNK--TVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISG 439
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Q +AI LFR MQ E +K D + M+ SAC LGA EL +W+H YIE+ G+
Sbjct: 440 LVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD 499
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ LN AL+DM+A+ G A+QVF M + V WT I +A+ G G A +F++M
Sbjct: 500 MRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLI 559
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
VKP+ + F+ +L+AC H G VE G F++M+ +GI P+IE YGCM+DLLGRAG L+
Sbjct: 560 QGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLR 618
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA L++ MP E N +WGSLLAA ++ +VE+ A + + +L P +G + +LSNIYA
Sbjct: 619 EAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYA 678
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
G+W + ++R +R+ GV+K+PG S ++V+ +HEF +GD SHP+ + +L ++N
Sbjct: 679 SAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNC 738
Query: 485 QMKFAEHLQNEFSGVLESD 503
+ A H+ + + +L+ D
Sbjct: 739 RFSDAGHIPDLSNVLLDVD 757
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 199/404 (49%), Gaps = 51/404 (12%)
Query: 5 GLDQNNHLLSRFID------SCSSLGFSDYAYSIFTHKSKPD--VYLYNTTIKALCQTDN 56
GLDQ L++ ++ S SL ++ A+ +F + D +++ N+ I+
Sbjct: 52 GLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGL 111
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A++LY ++ + P++Y+FPFVL K++ G ++H V GL+ DV +
Sbjct: 112 GREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNC 171
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI YA C G +++ +FE M+E+NV+
Sbjct: 172 LIHFYAEC---------------------------------GHMDHGHKVFEGMSERNVV 198
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SWT+LI GYA+ D+P EA++LF M ++P + M+ +SACA+L +++GE + YI
Sbjct: 199 SWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYI 258
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ GL + NAL+DMY K G I A ++F+ +++++ + T+++ A GL REAL
Sbjct: 259 GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 318
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY----GC 352
+ M + +P+ +T ++ +SA LV+L ++ + Y I +E +
Sbjct: 319 AILDEMLQQGPRPDRVTMLSAISASAQ--LVDL---FYGKVCHGYVIRNGLEGWDSIGNV 373
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ID+ + G + A ++ M W SL A GDVE
Sbjct: 374 IIDMYMKCGKPEMACRVFDLMS-NKTVVSWNSLTAGFIRNGDVE 416
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 194/424 (45%), Gaps = 68/424 (16%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+++ + + I + G D+ + +F S+ +V + + I + D P AV L+
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYAS 123
++ + +RP + + V+ A KL +++G + C +G GL + +V AL+ MY
Sbjct: 221 FEMVEAGIRPSSVTMVCVISACAKLRDLDMGERV-CAYIGELGLKLNKVMVNALVDMYMK 279
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C I A+++FDE R N+ ++NT+++ YA+ G
Sbjct: 280 CGAIDAAKRLFDECVDR--NLVLYNTILSNYARQG------------------------- 312
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
EA+ + M + +PD + ML+A+SA AQL + G+ H Y+ + GL
Sbjct: 313 ------LAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEG 366
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT------------------------- 278
+ N +IDMY K GK A +VF+ M NK+V++
Sbjct: 367 WDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIP 426
Query: 279 ------WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
W TMI+GL L +A+++F M+ +K + +T + I SAC ++G EL +
Sbjct: 427 ERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA-K 485
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+ + + GI + ++D+ R G Q A ++ +M E + + W + + +
Sbjct: 486 WVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAME 544
Query: 393 GDVE 396
G+ E
Sbjct: 545 GNGE 548
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 283/473 (59%), Gaps = 8/473 (1%)
Query: 4 RGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+GLDQ+ ++L++ I + + LG YA + + +L+ I+ A+
Sbjct: 75 KGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAI 134
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+Y ++ + P +++F +LKA + + LGR+ H QT V+V +I MY
Sbjct: 135 AMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMY 194
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C+ I ARKVFDE+ R +V W ++A YA+VG++ A LFE + K++++WT +
Sbjct: 195 VKCESIDCARKVFDEMPER--DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAM 252
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ G+AQ +P EA+ F RM+ ++ DE+ + +SACAQLGA + + ++ G
Sbjct: 253 VTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY 312
Query: 242 NTI--VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ V + +ALIDMY+K G + +A+ VF +M NK+V T+++MI GLA HG +EAL +F
Sbjct: 313 SPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLF 372
Query: 300 SRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
M + +KPN +TF+ L AC H GLV+ GR+ F+ M +G++P + Y CM+DLLG
Sbjct: 373 HYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLG 432
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G LQEA +L++ M E + +WG+LL A I+ + E+ E A +HL +LEP GNY +
Sbjct: 433 RTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYIL 492
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY-IEVSKRVHEFVAGDTSHP 470
LSN+YA G W ++RK++++ G+KK P S+ ++ + ++H+F G+ +HP
Sbjct: 493 LSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 282/513 (54%), Gaps = 49/513 (9%)
Query: 37 SKPD--VYLYNTTIKALCQTDNPLNAVILYNKI--QASALRPDNYSFPFVLKAVVKLSTI 92
+ PD +N ++ L +A++L+ + Q A PD+Y++P LK+ +
Sbjct: 79 ASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGL 138
Query: 93 ELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVA 152
LGR+IH T GLD +V V + I MYA C DA ++F+E+ R +V WN M++
Sbjct: 139 VLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYR--DVVSWNAMIS 196
Query: 153 GYAKVG--------------------------------------DLNNARALFELMTEKN 174
G+A G D+ + +F+ M K
Sbjct: 197 GFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKG 256
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+ISW ++A Y + EA+ LF RMQ + ++PD + + L +C ++ A+ LG+ IH
Sbjct: 257 LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE 316
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
I++ + + + L NAL+DMYA G + +A VF++M + V++WT++I+ HG GRE
Sbjct: 317 VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGRE 376
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+D+F +M ++P+ I F+AIL+AC H GL+++G+ YF M S + I PK+E Y CM+
Sbjct: 377 AIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMV 436
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRAG ++EA + MP + N +WG+LL A I+ ++++G A L++L P +G
Sbjct: 437 DLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTG 496
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD--- 471
Y +LSNIYA GRW + +R VM G+KK+PG S E+ RVH F GDTSHP
Sbjct: 497 YYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKM 556
Query: 472 -FDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+ +L ++L +I +M + ++ V E D
Sbjct: 557 IYKKLSELLRRIR-EMGYNPEVEATLHDVEEED 588
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 272/481 (56%), Gaps = 9/481 (1%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S +D S G + A +F +V +N+ I Q + A+ ++ + S +
Sbjct: 191 SALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVE 250
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARK 132
PD + V+ A LS I++G+E+H + V L +D+ + A + MYA C I +AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD + +R NV +MV+GYA AR +F M E+NV+SW LIAGY Q +
Sbjct: 311 IFDSMPIR--NVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------TIVP 246
EA++LF ++ E+V P L ACA L + LG H ++ ++G +
Sbjct: 369 EALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIF 428
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G + + VF M + ++W MI G A +G G EAL++F M +
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSG 488
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+ IT I +LSAC H G VE GR YF+ M +G+ P + Y CM+DLLGRAG+L+EA
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ ++ MP + ++ IWGSLLAA ++ ++ LG+ + L ++E NSG Y +LSN+YA L
Sbjct: 549 KSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAEL 608
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
G+W ++ +RK+MR GV K PGCS+I++ H F+ D SHP +++ +L + +M
Sbjct: 609 GKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Query: 487 K 487
+
Sbjct: 669 R 669
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 159/288 (55%), Gaps = 3/288 (1%)
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+KLS I++ R +H + +G ++V + LI YA C + D R++FD++ R NV
Sbjct: 32 LKLSAIDV-RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQR--NVFT 88
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN++V G K+G L+ A +LF M E++ +W ++++G+AQ D+ EA+ F M E
Sbjct: 89 WNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGF 148
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+E + LSAC+ L + G IH+ I + + V + +AL+DMY+K G + A Q
Sbjct: 149 VLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQ 208
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ M +++V++W ++I +G EAL +F M + V+P+E+T +++SAC +
Sbjct: 209 VFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSA 268
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+++G+ + + I +D+ + ++EA + MP
Sbjct: 269 IKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 190/416 (45%), Gaps = 73/416 (17%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ LGF D A S+F + D +N+ + Q D A+ + + + Y+F
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFA 156
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
L A L+ + G +IH + SDV++ +AL+ MY+ C + DA++VFDE+ R
Sbjct: 157 SGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDR 216
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
NV WN+++ Y + G A +F++M E SW
Sbjct: 217 --NVVSWNSLITCYEQNGPAVEALKVFQVMLE----SW---------------------- 248
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSG 259
V+PDE+ + + +SACA L A+++G+ +H ++ L + L+NA +DMYAK
Sbjct: 249 -----VEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCS 303
Query: 260 KIGKALQVFENMK-------------------------------NKSVITWTTMIAGLAL 288
+I +A +F++M ++V++W +IAG
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRY----GI 343
+G EAL +F ++R V P TF IL AC + + LG + + +++K + G
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGE 423
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 397
E I +ID+ + G ++E + R+M E + W +++ A N YG+ L
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEAL 478
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/475 (38%), Positives = 270/475 (56%), Gaps = 28/475 (5%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S ID S G A +F+ + ++ +N+ I Q A+ ++ ++ S L
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARK 132
PD + V+ A L ++ G +IH + V T D V+ AL+ MYA C + +AR+
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD +S+R NV +MV+GYA+ + AR +F MT++NV+SW LIAGY Q +
Sbjct: 306 VFDRMSIR--NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ LFR ++ E++ W +Y L + + + N+LI
Sbjct: 364 EALRLFRLLKRESI------------------------WPTHYTFGNLLKSDIFVGNSLI 399
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY K G I +VFE MK + ++W +I G A +G G EAL +F +M KP+ +
Sbjct: 400 DMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHV 459
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T I +L AC H GLVE GR YF M+ +G+ P + Y CM+DLLGRAG L EA+ L+
Sbjct: 460 TMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEA 518
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP +A +WGSLLAA ++G++E+G+ A + L++++P NSG Y +LSN+YA LGRW +
Sbjct: 519 MPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDV 578
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++RK+MR GV K PGCS+IEV RVH F+ D SHP ++Y +L + QMK
Sbjct: 579 VRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMK 633
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 162/300 (54%), Gaps = 2/300 (0%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
P++ F +L + ++ + R +H + + T ++ + LI +Y C C+ DARK+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
FD + R N WN++++ K G L+ A LF M E + SW ++++G+AQ D+ E
Sbjct: 73 FDRMPQR--NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEE 130
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
++ F +M E+ +E + +ALSACA L + +G +H + + +T V + +ALID
Sbjct: 131 SLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MY+K G + A +VF M ++++TW ++I +G EAL++F RM + ++P+E+T
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+++SAC + ++ G + + + ++D+ + + EA ++ RM
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 181/400 (45%), Gaps = 53/400 (13%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N + I + GF D A +F +PD +N+ + Q D ++ + K+
Sbjct: 79 RNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKM 138
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
+ YSF L A L + +G ++H + +DV++ +ALI MY+ C +
Sbjct: 139 HREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSV 198
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
A +VF + R N+ WN +LI Y Q
Sbjct: 199 ACAEEVFSGMIER--NLVTWN-------------------------------SLITCYEQ 225
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVP 246
+EA+ +F RM ++PDE+ + + +SACA L A++ G IH ++ +
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L NAL+DMYAK K+ +A +VF+ M ++V++ T+M++G A + A MFS+M
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKM---- 341
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG-----------CMID 355
+ N +++ A+++ G E R F ++K R I P +G +ID
Sbjct: 342 TQRNVVSWNALIAGYTQNGENEEALRLFRLLK-RESIWPTHYTFGNLLKSDIFVGNSLID 400
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 393
+ + G +++ ++ +M E + W +++ A N YG
Sbjct: 401 MYMKCGSIEDGSRVFEKMK-ERDCVSWNAIIVGYAQNGYG 439
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 278/488 (56%), Gaps = 9/488 (1%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S ID S G A +F + +V +N I Q + A+ + ++ +
Sbjct: 195 SGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFK 254
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARK 132
PD + V+ A L+ + G +IH + V + +D+ + AL+ MYA C + +AR
Sbjct: 255 PDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARC 314
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD + +R N TMV+GYAK + AR++F + +K+++SW LIAGY Q +
Sbjct: 315 VFDRMPVR--NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENE 372
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVP 246
EA+ LFR ++ E+V P L+A A L +ELG H+++ ++G +
Sbjct: 373 EALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIF 432
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G + + L+VFENM K ++W TMI G A +G G EAL++F +M +
Sbjct: 433 VGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESG 492
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+ +T I L AC H GLVE GRRYF M +G+ P + Y CM+DLLGRAG L+EA
Sbjct: 493 EKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEA 552
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ L+ MP + +A +W SLL+A ++ ++ LG+ + + +++P +SG Y +L+N+Y+ L
Sbjct: 553 KDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSEL 612
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW ++ +RK+MR GV K PGCS+I++ VH F+ D HP +Y IL + M
Sbjct: 613 GRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHM 672
Query: 487 KFAEHLQN 494
+ A ++ +
Sbjct: 673 RQAGYVPD 680
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 160/300 (53%), Gaps = 2/300 (0%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D+ F +L VKL + R +H + + T +V + LI +Y C + ARKVF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
D +S R NV +N++++ + G ++ + LF LM EK+ SW ++IAG+AQ D+ EA
Sbjct: 83 DRMSER--NVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEA 140
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ F RM ++ ++ + + LSAC++L ++LG IH I + + V + + LID
Sbjct: 141 LDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDF 200
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
Y+K G +G A +VF+ M+ K+V++W +I +G EAL+ F RM KP+E+T
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTL 260
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+++SAC + + G + + + ++D+ + G + EA + RMP
Sbjct: 261 ASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 187/429 (43%), Gaps = 73/429 (17%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
R ++N + I + GF D + +F+ + D +N+ I Q D A+
Sbjct: 84 RMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDW 143
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ ++ ++YSF L A +L ++LG +IH + DV + + LI Y+
Sbjct: 144 FVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSK 203
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + AR+VFD + + NV WN ++ Y + N A+
Sbjct: 204 CGLVGCARRVFDGMEEK--NVVSWNCLITCYEQ-----NGPAI----------------- 239
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLN 242
EA+ F RM KPDE+ + + +SACA L A + G IH ++
Sbjct: 240 ---------EALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFR 290
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENM------------------------------- 271
+ L NAL+DMYAK G++ +A VF+ M
Sbjct: 291 NDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATI 350
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K K +++W +IAG +G EAL +F ++R V P TF +L+A ++ +ELGR
Sbjct: 351 KQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGR 410
Query: 332 R-YFNIMKSRY----GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ + +++K + G EP I +ID+ + G ++E ++ M E + W +++
Sbjct: 411 QAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM-VEKDHVSWNTMI 469
Query: 387 A--ASNIYG 393
A N YG
Sbjct: 470 IGYAQNGYG 478
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/461 (38%), Positives = 270/461 (58%), Gaps = 37/461 (8%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI--LYNKIQASALRPDNYS 78
S G DYA IF+ P ++ YN+ I+ T P I + + P+ ++
Sbjct: 35 SPFGNFDYARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFT 94
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
FVLKA + +E G++IH Q + +G S +V ++L+ Y+ C+ I ARKVFDE++
Sbjct: 95 MAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEIT 154
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
R N+ W+ MV+GYA++G + NEA+ +F
Sbjct: 155 ER--NLVCWSAMVSGYARLGMI-------------------------------NEALIMF 181
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
R MQV ++PDE++++ LSACA +GA+++G+W+H YI++ ++ + LN ALI+MYAK
Sbjct: 182 REMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKC 241
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G I KA ++F+ M+ K W++MI GLA+HGL +AL++FSRME A+ KPN +TFI IL
Sbjct: 242 GCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGIL 301
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
SAC H GLV G+RY++ M GIEP +E YGCM+DLL R G + EA +P +
Sbjct: 302 SACAHGGLVSDGKRYWSSM-LELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPD 359
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
IW +LL A ++ E L++LEP + NY IL+N+YA + + + +RK+
Sbjct: 360 PVIWRTLLVAYTKNRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKM 419
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
M++ G+K +PGC+ IEV VH FV GD SHP+ + + + L
Sbjct: 420 MKENGIKALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTL 460
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 139/260 (53%), Gaps = 7/260 (2%)
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN-EAITLFRRMQVENVK-PD 209
A + G+ + AR +F + + ++ ++I G P+ E I LF+ M + P+
Sbjct: 32 AALSPFGNFDYARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPN 91
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
M L AC+ + A+E G+ IH I + G ++ + ++L++ Y+K +I A +VF+
Sbjct: 92 TFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFD 151
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
+ ++++ W+ M++G A G+ EAL MF M+ ++P+E++ + +LSAC VG +++
Sbjct: 152 EITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDI 211
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G+ +K R I +E +I++ + G +++A ++ M + + A W S++
Sbjct: 212 GKWVHAYIKKRM-IHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKA-WSSMIVGL 269
Query: 390 NIYGDVELGECALQHLIKLE 409
I+G L E AL ++E
Sbjct: 270 AIHG---LAEDALNVFSRME 286
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 33/281 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++ S ++ S A +F ++ ++ ++ + + A+I++
Sbjct: 122 GFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMF 181
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q + PD S VL A + +++G+ +H + D+ + ALI MYA C
Sbjct: 182 REMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKC 241
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
CI AR++FDE +RV + W++M+ G A I G
Sbjct: 242 GCIEKAREIFDE--MRVKDSKAWSSMIVGLA--------------------------IHG 273
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
A+ +A+ +F RM+ KP+ + + LSACA G V G+ + + + G+
Sbjct: 274 LAE-----DALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLELGIEPS 328
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ ++D+ + G I +A + + W T++
Sbjct: 329 MEHYGCMVDLLCRGGLIDEAYDFALIIPTPDPVIWRTLLVA 369
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 279/464 (60%), Gaps = 2/464 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID + G + A +F ++ + + + I + Q A++L+N+++ + D
Sbjct: 287 LIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASD 346
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ VL + I +G ++H T+ GLDS V V AL+ MYA C ++ A F+
Sbjct: 347 QFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFE 406
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ +R ++ W M+ +++ GD+ AR F+ M E+NVISW +++A Y Q E +
Sbjct: 407 LMPIR--DIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGL 464
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
++ +M E VK D I ++SACA L + LG I E+ G ++ V + N+++ MY
Sbjct: 465 KVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMY 524
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
++ G+I +A ++F ++ K++++W M+AG A +G GR+ +++F +M P++I+++
Sbjct: 525 SRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYV 584
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
++LS C H G V G+ YF M +GI P E + CM+DLLGRAG L++A+ L+ +MPF
Sbjct: 585 SVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPF 644
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ NAAIWG+LLAA I+G+ +L E A+++L++L+ G+Y +L+NIY+ G+ +
Sbjct: 645 KPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNV 704
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
RK+MRD GV+K PGCS+IEV RVH F DT+HP ++++L
Sbjct: 705 RKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 202/456 (44%), Gaps = 20/456 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL + L + ++ S+ G AY +F P+VY +NT I + A
Sbjct: 30 LIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREA 89
Query: 61 VILYNKIQASALRP---------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDV 111
L+ K+ N +KA L ++L ++H D
Sbjct: 90 EKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDT 149
Query: 112 HVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV--WNTMVAGYAKVGDLNNARALFEL 169
V +++ MY C + A+KVF R N ++ WN+M+ GY+K G + A LF
Sbjct: 150 CVETSVLDMYIKCGAMDFAQKVF----CRTPNPSLFCWNSMIYGYSKYGSVKKALELFAK 205
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M E++ +SW T+I+ +Q E + F M + +P+ + + LSAC + +E G
Sbjct: 206 MPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWG 265
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+H I + V LIDMYAK G++ A QVF+ + + ++WT++I G+A
Sbjct: 266 AHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQA 325
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G EAL +F++M V ++ T +L C + +G + +R G++ +
Sbjct: 326 GFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITR-GLDSSVPV 384
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
++ + + G + +A MP + W +++ A + GDVE A ++ K+
Sbjct: 385 ANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMITAFSQAGDVEK---AREYFDKMP 440
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
N ++ + Y G W E K+ M GVK
Sbjct: 441 ERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVK 476
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 166/340 (48%), Gaps = 63/340 (18%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
+K L +I + R++H Q + GL S + + L+ MY++C I DA +VF +
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFP-- 68
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
NV WNTM++G+A G + A LFE M E++ +SW ++++GY F +
Sbjct: 69 NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGY------------FHNGE 116
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--YGLNTIVPLN------------ 248
+E A + A LG ++L +H + E+ +G++T V +
Sbjct: 117 LE----------ATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMD 166
Query: 249 -----------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
N++I Y+K G + KAL++F M + ++W TMI+ L+ HG
Sbjct: 167 FAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGF 226
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQY 350
G E L+ F M +PN +T+ ++LSAC + +E G + I++ +EP ++ Y
Sbjct: 227 GAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVR----MEPCLDVY 282
Query: 351 -GC-MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GC +ID+ + G L+ A ++ + E NA W SL+
Sbjct: 283 AGCGLIDMYAKCGRLESARQVFDGLT-EHNAVSWTSLIGG 321
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
++ CA L ++ + +H + GL + + L N L++MY+ G I A +VF + +
Sbjct: 10 SMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPN 69
Query: 276 VITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEIT--------FIAILSACCHVGL 326
V +W TMI+G A G REA +F +M ER V N + A + A +G
Sbjct: 70 VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGY 129
Query: 327 VELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
++L + K +GI+ +E ++D+ + G + A+K+ R P + W S+
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVET--SVLDMYIKCGAMDFAQKVFCRTP-NPSLFCWNSM 186
Query: 386 LAASNIYGDVE 396
+ + YG V+
Sbjct: 187 IYGYSKYGSVK 197
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/493 (36%), Positives = 288/493 (58%), Gaps = 9/493 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ ++++ + + +SLG + + +F + DV +N I + +A+ ++
Sbjct: 76 GLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVF 135
Query: 65 NKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++ Q S L+ D + L A L +E+G I+ + V T + V + AL+ M+
Sbjct: 136 KRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCK 194
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C+ AR VFD S+R NV W +MV GY G ++ AR LFE K+V+ WT ++
Sbjct: 195 CGCLDKARAVFD--SMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMN 252
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q ++ +EA+ LFR MQ ++PD +++ L+ CAQ GA+E G+WIH YI + +
Sbjct: 253 GYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV 312
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ AL+DMYAK G I AL+VF +K + +WT++I GLA++G+ ALD++ ME
Sbjct: 313 DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME 372
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
V+ + ITF+A+L+AC H G V GR+ F+ M R+ ++PK E C+IDLL RAG L
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLL 432
Query: 364 QEAEKLLRRMPFEANAA---IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
EAE+L+ +M E++ ++ SLL+A+ YG+V++ E + L K+E +S + +L+
Sbjct: 433 DEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLA 492
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT--SHPDFDRLYQI 478
++YA RW + +R+ M+D+G++K PGCS IE+ HEF+ GD SHP D + +
Sbjct: 493 SVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSM 552
Query: 479 LCKINGQMKFAEH 491
L + M EH
Sbjct: 553 LHQTTNLMLDLEH 565
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 188/382 (49%), Gaps = 72/382 (18%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P + +YN +K+L + + L+ +++ L PDN++ P VLK++ +L + G ++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H V GL+ D +V +L+ MYAS I KVFDE+ R +V WN +++ Y
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR--DVVSWNGLISSY---- 122
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAAL 217
+ N R FE +AI +F+RM Q N+K DE +++ L
Sbjct: 123 -VGNGR--FE------------------------DAIGVFKRMSQESNLKFDEGTIVSTL 155
Query: 218 SACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
SAC+ L +E+GE I+ + + ++ ++ V + NAL+DM+ K G + KA VF++M++K+V
Sbjct: 156 SACSALKNLEIGERIYRFVVTEFEMS--VRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 277 ITWTTMIAGLALHG-----------------------------LGR--EALDMFSRMERA 305
WT+M+ G G R EAL++F M+ A
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++P+ +++L+ C G +E G+ I ++R ++ + ++D+ + G ++
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT--ALVDMYAKCGCIE 331
Query: 365 EAEKLLRRMPFEANAAIWGSLL 386
A ++ + E + A W SL+
Sbjct: 332 TALEVFYEIK-ERDTASWTSLI 352
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 147/309 (47%), Gaps = 22/309 (7%)
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
L+ +++ + ++ A + + LF ++ + + PD + L + +L V
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
GE +H Y + GL ++N+L+ MYA GKI +VF+ M + V++W +I+
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 289 HGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G +A+ +F RM + + +K +E T ++ LSAC + +E+G R + + + + + +I
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC-ALQHLI 406
++D+ + G L +A + M + N W S+ ++G V G + L
Sbjct: 185 GN--ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSM-----VFGYVSTGRIDEARVLF 236
Query: 407 KLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IE 454
+ P + + + N Y R++E+ ++ + M+ G++ + GC+ +E
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 455 VSKRVHEFV 463
K +H ++
Sbjct: 297 QGKWIHGYI 305
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 284/541 (52%), Gaps = 68/541 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A IF + +V L+N + A Q ++ + L+ ++QA+ +RP+ +++P +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM----------------------- 120
+ I+LG +IH +V TG +SD++V LI M
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 121 --------YASCKCIYDARKVFDELS-LRVW----------------------------- 142
Y +C DA F E+ +W
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 143 -------NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+V++WN +V YA+ G + A + FE + K+ I+W L++G+AQ EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F RM VK + ++ALSA A L ++ G+ IH + + G + + NALI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K G A F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L+AC HVGLVE G YF M YGI P+ + Y C+ID+ GRAG L A+K + MP
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
A+A +W +LL+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ +W ++
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
RK+MRD GV+K PG S+IEV VH F GD HP +++Y L IN ++ + Q +
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832
Query: 496 F 496
+
Sbjct: 833 Y 833
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 173/387 (44%), Gaps = 35/387 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+ RGL + + + ID S G A +F S D + + Q A+
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY ++ + + P Y VL + K GR IH Q G S++ V A+I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G A +F M ++ +++ TL
Sbjct: 189 LRC---------------------------------GSFRLAERVFCDMPHRDTVTFNTL 215
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+G+AQ A+ +F MQ + PD + + + L+ACA LG ++ G +H+Y+ + G+
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
++ + +L+D+Y K G + AL +F + +V+ W M+ ++ ++F +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ A ++PN+ T+ IL C ++LG + + + + G E + G +ID+ + G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYG 394
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAA 388
+L++A ++L M E + W S++A
Sbjct: 395 WLEKARRVL-EMLKEKDVVSWTSMIAG 420
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-EL 228
MT + S +AG+ + P + ++LF ++ + AL AC G ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
IH GL + N LID+Y+K+G + A +VFE + + ++W M++G A
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+GLG EAL ++ +M RA V P ++LS+C L G R + ++G +I
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMP 374
+I L R G + AE++ MP
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/490 (36%), Positives = 285/490 (58%), Gaps = 8/490 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M V+ + N L+S ++ S G + A S F D+ +N+ I Q L A
Sbjct: 203 MTVKNISTWNALISLYMQS----GQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEA 258
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +++K + +L+PDN++ +L A L + +G++IH + ++ V ALI
Sbjct: 259 LAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALIS 318
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA + AR + + N+ + +++ GY K+G++ AR +F + +++V++WT
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q N+A+ LFR M E +P+ + A LS + L +E G+ IH +
Sbjct: 379 AMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKA 438
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALD 297
G ++ + NALI MYAK+G I A +VF+ N K K +++WT+MI LA HGLG+EA++
Sbjct: 439 GESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGK-KEIVSWTSMIMALAQHGLGKEAIN 497
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F RM +KP+ IT++ +LSAC HVGLVE GR+Y+N+M + IEP + Y CMIDL
Sbjct: 498 LFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLY 557
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG LQEA + MP E + WGSLLA+ I+ + +L + A + L+ ++P NSG Y
Sbjct: 558 GRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYL 617
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
L+N+Y+ G+W + + RK+M+D GV+K G S+I + VH F D HP D +Y+
Sbjct: 618 ALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYK 677
Query: 478 ILCKINGQMK 487
++ +I ++K
Sbjct: 678 LMAEIWEEIK 687
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 187/370 (50%), Gaps = 39/370 (10%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
NA+ ++ K+ + + P ++ VL + T+++GR+IH V GL S V V +L+
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA C A+ VFD ++++ N++ WN +++ Y + G A + FE M +++++SW
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVK--NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
++I+GY+Q EA+ +F +M E ++KPD + + LSACA L + +G+ IH YI
Sbjct: 243 NSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 238 QYGLNTIVPLNNALIDMYAKSG------------------------------KIGK---A 264
+ T + NALI MYAKSG K+G A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F ++++ V+ WT MI G +GL +AL++F M +PN T A+LS +
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSL 422
Query: 325 GLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
++E G++ + + +K+ P + +I + + G + A+++ + W
Sbjct: 423 TILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480
Query: 384 SLLAASNIYG 393
S++ A +G
Sbjct: 481 SMIMALAQHG 490
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 34/286 (11%)
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
F +L+ V++ GR +HCQ + GL V+++ L+ YA + A VFDE+
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
L+ + WNT+++GYAK G+ +R L M + + +SWT +I GY Q + AI +F
Sbjct: 73 LK--STFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK- 257
+M E V P + + LS+CA +++G IH+++ + GL + VP+ +L++MYAK
Sbjct: 131 AKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKC 190
Query: 258 ------------------------------SGKIGKALQVFENMKNKSVITWTTMIAGLA 287
SG+ A FE M ++ +++W +MI+G +
Sbjct: 191 GDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYS 250
Query: 288 LHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR 332
G EAL +FS+M +KP+ T +ILSAC ++ + +G++
Sbjct: 251 QQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 284/541 (52%), Gaps = 68/541 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A IF + +V L+N + A Q ++ + L+ ++QA+ +RP+ +++P +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM----------------------- 120
+ I+LG +IH +V TG +SD++V LI M
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 121 --------YASCKCIYDARKVFDELS-LRVW----------------------------- 142
Y +C DA F E+ +W
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 143 -------NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+V++WN +V YA+ G + A + FE + K+ I+W L++G+AQ EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F RM VK + ++ALSA A L ++ G+ IH + + G + + NALI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K G A F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L+AC HVGLVE G YF M YGI P+ + Y C+ID+ GRAG L A+K + MP
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
A+A +W +LL+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ +W ++
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
RK+MRD GV+K PG S+IEV VH F GD HP +++Y L IN ++ + Q +
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832
Query: 496 F 496
+
Sbjct: 833 Y 833
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 173/387 (44%), Gaps = 35/387 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+ RGL + + + ID S G A +F S D + + Q A+
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY ++ + + P Y VL + K GR IH Q G S++ V A+I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G A +F M ++ +++ TL
Sbjct: 189 LRC---------------------------------GSFRLAERVFCDMPHRDTVTFNTL 215
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+G+AQ A+ +F MQ + PD + + + L+ACA LG ++ G +H+Y+ + G+
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
++ + +L+D+Y K G + AL +F + +V+ W M+ ++ ++F +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ A ++PN+ T+ IL C ++LG + + + + G E + G +ID+ + G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYG 394
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAA 388
+L++A ++L M E + W S++A
Sbjct: 395 WLEKARRVL-EMLKEKDVVSWTSMIAG 420
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-EL 228
MT + S +AG+ + P + ++LF ++ + AL AC G ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
IH GL + N LID+Y+K+G + A +VFE + + ++W M++G A
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+GLG EAL ++ +M RA V P ++LS+C L G R + ++G +I
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMP 374
+I L R G + AE++ MP
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 266/464 (57%), Gaps = 35/464 (7%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
S G D A +F DV +N I Q+ A++ + ++Q + + P+ +
Sbjct: 209 SQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVV 268
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL A + ELG+ I G S++ + ALI MY CKC
Sbjct: 269 VLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMY--CKC--------------- 311
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
G+ + AR LF+ + EK+VISW T+I GY+ + EA+ LF M
Sbjct: 312 ----------------GETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVM 355
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGK 260
NVKP+++ L L ACA LGA++LG+W+H YI++ N+ L +LIDMYAK G
Sbjct: 356 LRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGC 415
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILS 319
I A +VF +M ++++ +W M++G A+HG AL +FS M + +P++ITF+ +LS
Sbjct: 416 IEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLS 475
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC GLV+LG +YF M YGI PK++ YGCMIDLL RA +EAE L++ M E +
Sbjct: 476 ACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDG 535
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
AIWGSLL+A +G VE GE + L +LEP N+G + +LSNIYA GRW++ +IR +
Sbjct: 536 AIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRL 595
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
D G+KK+PGC+ IE+ VHEF+ GD HP+ + +Y++L +++
Sbjct: 596 NDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVD 639
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 223/401 (55%), Gaps = 8/401 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKS---KPDVYLYNTTIKALCQTD 55
+I GL+ + S+ I C S G YA S+F K +V+++N+ I+ +
Sbjct: 51 IIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSS 110
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
+PL+++ L++++ ++P++++FPF+ K+ K G+++H + L + HV
Sbjct: 111 SPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHT 170
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
++I MYAS + AR VFD+ SLR + + ++ GY G L++AR LF+ + K+V
Sbjct: 171 SVIHMYASVGEMDFARLVFDKSSLR--DAVSFTALITGYVSQGCLDDARRLFDEIPVKDV 228
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SW +I+GY Q + EAI F MQ NV P++ M+ LSAC + ELG+WI ++
Sbjct: 229 VSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSW 288
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G + + L NALIDMY K G+ A ++F+ ++ K VI+W TMI G + L EA
Sbjct: 289 VRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEA 348
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F M R+ VKPN++TF+ IL AC +G ++LG+ + + +ID
Sbjct: 349 LALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLID 408
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ + G ++ AE++ R M N A W ++L+ ++G E
Sbjct: 409 MYAKCGCIEAAERVFRSM-HSRNLASWNAMLSGFAMHGHAE 448
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 266/472 (56%), Gaps = 33/472 (6%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F + DV + I L ++ A+ +Y ++Q + + P+ ++ +L A +
Sbjct: 385 VFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAA 444
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+E GR IH Q V GL +D HV L+ MY+ C
Sbjct: 445 LEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMC--------------------------- 477
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G + +AR +F+ M +++++++ +I GYA + EA+ LF R+Q E +KPD++
Sbjct: 478 ------GSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 531
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ L+ACA G++E IH + + G + + NAL+ YAK G A VFE M
Sbjct: 532 TYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM 591
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
++VI+W +I G A HG G++AL +F RM+ VKP+ +TF+++LSAC H GL+E GR
Sbjct: 592 TKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGR 651
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
RYF M + I P IE YGCM+DLLGRAG L EAE L++ MPF+AN IWG+LL A I
Sbjct: 652 RYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRI 711
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+G+V + E A + +KL+ N+ Y LS++YA G W+ + K+RK+M GV K PG S
Sbjct: 712 HGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 771
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+I+V ++H FVA D SHP +++Y L ++ MK ++ + S + + D
Sbjct: 772 WIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVD 823
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 38/372 (10%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F D+ +NT I L + A +YN++Q + P+ ++ +L A V +
Sbjct: 284 VFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAA 343
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ G+EIH + G SD+ V ALI M
Sbjct: 344 LHWGKEIHSRVAKAGFTSDIGVQNALISM------------------------------- 372
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
Y++ G + +AR +F+ M K+VISWT +I G A+ EA+T+++ MQ V+P+ +
Sbjct: 373 --YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRV 430
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ L+AC+ A+E G IH + + GL T + N L++MY+ G + A QVF+ M
Sbjct: 431 TYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ ++ + MI G A H LG+EAL +F R++ +KP+++T+I +L+AC + G +E R
Sbjct: 491 IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAR 550
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
+++ + G ++ + G +A + +M + N W +++ S
Sbjct: 551 EIHTLVR-KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQ 608
Query: 392 YGDVELGECALQ 403
+G G+ ALQ
Sbjct: 609 HGR---GQDALQ 617
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 170/350 (48%), Gaps = 34/350 (9%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F K V + TI A ++ K++ + P+ ++ VL
Sbjct: 175 GSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVL 234
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + ++ G+ +H + + G +SD V AL++MYA C D R+VF++L R +
Sbjct: 235 NAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR--D 292
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WNTM+ G A+ GY + EA ++ +MQ
Sbjct: 293 LIAWNTMIGGLAE--------------------------GGYWE-----EASEVYNQMQR 321
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E V P++I + L+AC A+ G+ IH+ + + G + + + NALI MY++ G I
Sbjct: 322 EGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKD 381
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF+ M K VI+WT MI GLA G G EAL ++ M++A V+PN +T+ +IL+AC
Sbjct: 382 ARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSS 441
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+E GRR + G+ ++++ G +++A ++ RM
Sbjct: 442 PAALEWGRRIHQQV-VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 179/378 (47%), Gaps = 40/378 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N L++ +I C S+ + + ++ + V+ +N + Q A+ L ++Q
Sbjct: 62 NALINMYI-QCGSIEEARQVWKKLSYMERT-VHSWNAMVVGYIQYGYIEKALKLLRQMQQ 119
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
L PD + L + +E GREIH Q + GL DV V ++ MYA
Sbjct: 120 HGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYA------- 172
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
K G + AR +F+ M +K+V+SWT I GYA
Sbjct: 173 --------------------------KCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+ A +F++M+ E V P+ I ++ L+A + A++ G+ +H+ I G + +
Sbjct: 207 RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGT 266
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+ MYAK G QVFE + N+ +I W TMI GLA G EA +++++M+R V P
Sbjct: 267 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP 326
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA--- 366
N+IT++ +L+AC + + G+ + + ++ G I +I + R G +++A
Sbjct: 327 NKITYVILLNACVNSAALHWGKEIHSRV-AKAGFTSDIGVQNALISMYSRCGSIKDARLV 385
Query: 367 -EKLLRRMPFEANAAIWG 383
+K++R+ A I G
Sbjct: 386 FDKMVRKDVISWTAMIGG 403
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 31/272 (11%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV + +Q + ++ + +LK +++ + GR++H + D + V ALI
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C I +AR+V+ +LS V WN MV GY + G +
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYI------------------- 107
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+A+ L R+MQ + PD +++ LS+C GA+E G IH Q
Sbjct: 108 ------------EKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQA 155
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL V + N +++MYAK G I +A +VF+ M+ KSV++WT I G A G A ++F
Sbjct: 156 GLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIF 215
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ME+ V PN IT+I++L+A ++ G+
Sbjct: 216 QKMEQEGVVPNRITYISVLNAFSSPAALKWGK 247
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL + H+ + ++ S G A +F + D+ YN I + A+ L+
Sbjct: 459 GLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLF 518
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++Q L+PD ++ +L A ++E REIH G SD V AL+ YA C
Sbjct: 519 DRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKC 578
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
DA VF++++ R NV WN ++ G A+ G
Sbjct: 579 GSFSDASIVFEKMTKR--NVISWNAIIGGSAQHG-------------------------- 610
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+ +A+ LF RM++E VKPD + ++ LSAC+ G +E G + + + + +
Sbjct: 611 -----RGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIP 665
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ ++D+ ++G++ +A + + M + W ++ +HG
Sbjct: 666 TIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHG 713
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 281/538 (52%), Gaps = 65/538 (12%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L +NHLL S+ +D ++ + D + +NT I+ L P A++ +
Sbjct: 44 LRLSNHLLLALASVPSAAALADVVFARLPLPAARDPFAWNTAIR-LHAPARPRAALLYFA 102
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ +RPD Y+FP VLKA G +H + V GL +D+ V ALI Y
Sbjct: 103 RMRRCGVRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGLAADLFTVNALISFYCRIL 162
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL------------------------- 160
I RKVFDE ++ WN+MVAGY G++
Sbjct: 163 DIRSGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQEMFDEMPQKDTFSWATLIDGY 222
Query: 161 --------NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV------ 206
+ AR LF+ M E++++ W ++I GYA+ + +EA +LF M NV
Sbjct: 223 GKQGGAGVDRARELFDQMPERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIV 282
Query: 207 -------------------------KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+PD IA + A+SACAQLGA+E G W+H+Y+E+ L
Sbjct: 283 IDGHVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKL 342
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ V + ALIDMY K G + A+ +FE+M +SV+TW MI GL HG G +A+ +F R
Sbjct: 343 LSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHR 402
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
ME V ++++ + +L+AC H GLV G F+ MK +GI+PK+E YG ++DLLGRAG
Sbjct: 403 MEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAG 462
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L +A + MP E +WGSLLAA + VEL E +++ L L +SG Y +LSN
Sbjct: 463 RLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYVLLSN 522
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
IYA G W + +IRK+M D G++K G S IEV +HEFV G S+ D +Y +L
Sbjct: 523 IYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGVGSYICKDEMYLML 580
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 283/473 (59%), Gaps = 8/473 (1%)
Query: 4 RGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+GLDQ+ ++L++ I + + LG Y + + +L+ I+ A+
Sbjct: 76 KGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAI 135
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+Y ++ + P +++F +LKA + + LGR+ H QT V+V +I MY
Sbjct: 136 AMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMY 195
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C I ARKVFDE+ R +V W ++A YA+VG++ +A LFE + K++++WT +
Sbjct: 196 VKCGSIVCARKVFDEMPER--DVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAM 253
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ G+AQ +P EA+ F RM+ ++ DE+ + +SACAQLGA + + ++ G
Sbjct: 254 VTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY 313
Query: 242 NTI--VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ V + +ALIDMY+K G + +A+ VF +M NK+V ++++MI GLA HG +EALD+F
Sbjct: 314 SPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLF 373
Query: 300 SRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
M + +KPN +TF+ L+AC H GLV+ GR+ F M +G+EP + Y CM+DLLG
Sbjct: 374 HYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLG 433
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG LQEA +L++ M E + +WG+LL A I+ + ++ E A +HL +LEP GNY +
Sbjct: 434 RAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYIL 493
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY-IEVSKRVHEFVAGDTSHP 470
LSN+Y+ G W +RK++++ G+KK P S+ ++ + ++H+F G+ +HP
Sbjct: 494 LSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 546
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 289/526 (54%), Gaps = 52/526 (9%)
Query: 11 HLLSRFIDSCSSLGFSDYAYSIF--------THKSKPDVYLYNTTIKALCQTDNPLNAVI 62
H L+R I S LG A ++F H P+ +L NT ++A A+
Sbjct: 59 HFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAID 118
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
LY +Q + +N+++PFVLK G +H Q V TG SD+ V AAL+ MYA
Sbjct: 119 LYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYA 178
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGY---------------------------- 154
C I DA +VFD + +R +V W M+ Y
Sbjct: 179 KCGEIGDAHEVFDRMLIR--DVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITA 236
Query: 155 -------AKVGD----LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
++GD ++ AR +F+ M E+N ISW ++++GY Q +P +A++LF +MQ
Sbjct: 237 ISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQA 296
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
P+ + L +SAC+ LG+ LG +HN++ ++ L NA++DMY K G +
Sbjct: 297 SECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDT 356
Query: 264 ALQVFEN--MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A+++F N + + V +W +I+G +HG G+EAL++FSRM+ V+PN+ITF +ILSAC
Sbjct: 357 AVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSAC 416
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GL++ GR+ F M ++ + P+++ Y CM+D+LGRAG+L EA +L++++P + +
Sbjct: 417 SHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV 475
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
WG+LL A I+G+ ELGE A +L +LEP ++G Y ++SNIYA +W E +R+ M+
Sbjct: 476 WGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKS 535
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G+KK S IE VH F D S P + +Y+ + + +MK
Sbjct: 536 RGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMK 581
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 276/479 (57%), Gaps = 19/479 (3%)
Query: 30 YSIFTHKSKPDVYL-YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV-- 86
Y+ +P L +N ++AL + P A + ++ L PD+YSF F+++A
Sbjct: 67 YARLLLPQRPATLLAHNGLLRALARGPCPGLAFAAFRELP---LAPDHYSFTFLVRAATS 123
Query: 87 -----------VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ L +H G +D HV + + MYA+ + R F
Sbjct: 124 LAAAASATPVPTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFA 183
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
E+ +V M+ + GD++ AR LF+ M +++ ++W ++ GY ++ + EA+
Sbjct: 184 EIVSP--DVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREAL 241
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF MQ V E+ +++ L+ACAQ+GA+E G W+H+Y+ G+ V L AL+DMY
Sbjct: 242 GLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMY 301
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
+K G + +++VFE M+ +++ TWT+ ++GLA++G+G E L++F RME A ++PN +TF+
Sbjct: 302 SKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFV 361
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
A+L C GLVE GR F+ MK ++ +EP +E YGCM+DL GRAG L +A + MP
Sbjct: 362 AVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPV 421
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
E + +WG+LL AS I+ +V+LG+ A+ L ++E N + +LSNIYA W K+
Sbjct: 422 EPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKV 481
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
R +M+ GVKKMPGCS IEV +VHEF G SHP + + +L +++ +++ + N
Sbjct: 482 RNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAAN 540
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 124/305 (40%), Gaps = 56/305 (18%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
++ + + S+ G D A +F + D +N + + A+ L++++Q + +
Sbjct: 193 VTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGV 252
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+ VL A ++ +E G +H G+ V + AL+ MY+ C + + +
Sbjct: 253 AVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSME 312
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF+ ++R N+ W + ++G A G M E
Sbjct: 313 VFE--TMRERNIYTWTSALSGLAMNG-----------MGE-------------------- 339
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW----------IHNYIEQYGLN 242
E + LF+RM+ ++P+ + +A L C+ G VE G + ++E YG
Sbjct: 340 ECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYG-- 397
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDM 298
++D+Y ++G++ A+ +M W ++ +H LG+ A+
Sbjct: 398 -------CMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHK 450
Query: 299 FSRME 303
+ +E
Sbjct: 451 LTEIE 455
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 277/487 (56%), Gaps = 32/487 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + + + + + + G+ D + +F +K DV + I + + A+ +
Sbjct: 133 GLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECF 192
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++++S + D + VL A L + GR +H V +G
Sbjct: 193 VEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESG------------------ 234
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+V +W+V V + +V Y+K G ++A +F M +N++SW LIAG
Sbjct: 235 -------RV-------IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAG 280
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y Q ++ EA+ +F+ M +E ++P++ + +AL+ACAQLG+++ G W+H Y+++ L
Sbjct: 281 YVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLN 340
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
L AL+DMY+K G + +AL VFE + K V WT MI GLA+ G +L++FS+M R
Sbjct: 341 SKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIR 400
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+RV+PN +TF+ +LSAC H GLV+ G F +M Y +EP ++ YGCM+DLLGRAG L+
Sbjct: 401 SRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLE 460
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA K + MP E +WG+L + I+ ELGE HLIKL+PH+SG Y +L+N+Y+
Sbjct: 461 EAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYS 520
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
+W + +R++M+ GV K P CS+IEV+ +HEF+A D SH + +Y +L +
Sbjct: 521 RCQKWEAAANVRRLMKGKGVDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTA 580
Query: 485 QMKFAEH 491
Q+K A +
Sbjct: 581 QLKLATY 587
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
DL LF+ + + W T++ ++ QP + + R++ V PD L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLK 112
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
A ++L E + +I ++GL+ + N+L+ +A G + + ++F K V++
Sbjct: 113 AFSKLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVS 171
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
WT +I G +G EAL+ F M + V+ +E+T +++L A + V GR
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + ++D+ + GY +A K+ MP N WG+L+A
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMP-TRNLVSWGALIAG 280
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 272/481 (56%), Gaps = 11/481 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + + +D + G D A +F D LYNT I A + A L+
Sbjct: 134 GFQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELF 193
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ P+ + + + ++ H + G+ + V + A+I +A
Sbjct: 194 E------VMPERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVVNMV-LCTAMISGFAKT 246
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVA-GYAKVGDLNNARALFELMTEKNVISWTTLIA 183
+ DAR VFD +R +VA WN M+ YAK G + +AR +F+ M E+NV+ WT++I+
Sbjct: 247 GSVDDARSVFD--GMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMIS 304
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q+ + +A+ LFR MQ+ VK D+ + +S+C Q+GA++LG ++H Y + +GL
Sbjct: 305 GYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGK 364
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ + N+LIDMY+K G I KA ++F + + +WT MI G A++GL EALD+F++ME
Sbjct: 365 GISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQME 424
Query: 304 R-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
V PNEITF+ +L++C H GLVE G +F+ M YGI P+IE YGCM+DLLGRA
Sbjct: 425 EEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKL 484
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L EAE+ + MP + AIW SLL A G+V L E + + +LEP G +LSN+
Sbjct: 485 LAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNV 544
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA RW + K+R M V K PGCS IEV+ HEF++GD +H + + +Y IL I
Sbjct: 545 YATTSRWVDVNKVRTGMGRSRVSKRPGCSVIEVNGCAHEFLSGDETHLETEAIYNILLGI 604
Query: 483 N 483
N
Sbjct: 605 N 605
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 167/316 (52%), Gaps = 13/316 (4%)
Query: 59 NAVILYNKIQ--ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+AV LY ++ +RP ++ VLKA + + G ++H G +D +
Sbjct: 85 DAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIATT 144
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ +YA C + DAR+VFD L ++ + ++NTM+A Y + G++ A LFE+M E+N
Sbjct: 145 LVDLYARCGRLDDARRVFDRLLVK--DAQLYNTMIAAYMEAGEVELAEELFEVMPERNTH 202
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+ ++ GY+ + A +F ++ N + + A +S A+ G+V+ + + +
Sbjct: 203 TLMEMVGGYSARGDMDSAKHVF---EMANGVVNMVLCTAMISGFAKTGSVDDARSVFDGM 259
Query: 237 EQYGLNTIVPLNNALID-MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
Q + T N +I MYAK G + A +VF+ M ++V+ WT+MI+G G ++A
Sbjct: 260 RQRDVATW----NVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQA 315
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F M+ + VK ++ T ++S+C +G ++LG RY + +G+ I +ID
Sbjct: 316 VKLFRDMQISGVKADDATIATVVSSCGQMGALDLG-RYVHAYCDVHGLGKGISVKNSLID 374
Query: 356 LLGRAGYLQEAEKLLR 371
+ + G +++A ++ R
Sbjct: 375 MYSKCGDIKKAHEIFR 390
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 188/495 (37%), Positives = 284/495 (57%), Gaps = 11/495 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+DQ+ + R + ++ G D A ++ P Y + I A A+ L
Sbjct: 57 GVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALL 116
Query: 65 NKIQAS-ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+++ S L P ++ L A L+ +GR +H V L + +V AL+ MYA
Sbjct: 117 SEMLLSHGLLPTAHTLSASLPACGGLA---VGRALHGYAVKLALSGEPYVATALLGMYAR 173
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
AR +FD + V+V M+ YAK+G L++AR+LF+ + K++I W ++
Sbjct: 174 AGDAAAARVLFDGMQPDPHVVSV-TAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMD 232
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q +P+EA+ LFRRM V+PDE++++ ALSA AQLG E G W+H+++
Sbjct: 233 GYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRR 292
Query: 244 I---VPLNNALIDMYAKSGKIGKALQVFENMK--NKSVITWTTMIAGLALHGLGREALDM 298
+ + ALIDMY K G + A+ VF ++ ++ ++ W M+ G A+HG REAL
Sbjct: 293 VRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAA 352
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F ++ + P +ITFI +L+AC H GLV+ GR F M YGIEPK+E YGCM+DLLG
Sbjct: 353 FGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLG 412
Query: 359 RAGYLQEAEKLLRRMP-FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
RAG ++EA +L++ M + +A +W SLLAA ++ ++ELG+ HL+ NSG Y
Sbjct: 413 RAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYV 472
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSN+YA G W E G++R +MR G++K PGCS +EV +RV EFVAGD SHP +Y
Sbjct: 473 LLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYA 532
Query: 478 ILCKINGQMKFAEHL 492
L ++NG + H+
Sbjct: 533 KLEEVNGMARARGHV 547
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 267/461 (57%), Gaps = 33/461 (7%)
Query: 31 SIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
++F P + YN+ I+AL + + ++A + RP++++ F LKA +
Sbjct: 130 NLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 189
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
GR++H Q + GL + +V L+ +YA C+ + AR VFD ++ N+ W+ M
Sbjct: 190 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDK-NLVAWSAM 248
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V+GY++VG +N EA+ LFR MQ V+PDE
Sbjct: 249 VSGYSRVGMVN-------------------------------EALGLFREMQAVGVEPDE 277
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ M++ +SACA+ GA++LG+W+H YI++ G+ + L+ ALIDMYAK G I +A VF+
Sbjct: 278 VTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDA 337
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M K W+ MI G A+HGL +AL +FSRM +V+PN +TFI +LSAC H GLVE G
Sbjct: 338 MVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDG 397
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
RRY++IM++ GI+P +E YGCM+DLL R+G L +A + MP N+ IW +LL A
Sbjct: 398 RRYWSIMQN-LGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACK 456
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
+++ E A + L++LEPHN NY +LSN+YA +W+ +R+ M+ V + G
Sbjct: 457 SSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGR 516
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
S IE++ +HEFV D SHP+ + +L ++ +++ A H
Sbjct: 517 SSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGH 557
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 272/472 (57%), Gaps = 38/472 (8%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
PD + NT ++ + P A+ L+ + A PD +++P +L+A +L + G +
Sbjct: 88 PDPFSLNTVLRIFASSARPRVALALHRRHLAP---PDTHTYPPLLQACARLLALRYGEGL 144
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + GL S V V +L+ +Y +C A +VFDE+
Sbjct: 145 HAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIP-------------------- 184
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
E+N++SW +++ G+A +PNE +T+FR M PD +++ L+
Sbjct: 185 -----------PPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLT 233
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVI 277
ACA++G + LG +H ++ + GL NALID+YAK G + A ++F M ++V+
Sbjct: 234 ACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVV 293
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+WT++I GLA++G G +AL +FS MER ++ P EIT + +L AC H GLV+ G RYF+ M
Sbjct: 294 SWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQM 353
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
K+ YGI P+IE GCM+DLLGRAG ++EA + MP E NA +W +LL A ++ +E+
Sbjct: 354 KAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEI 413
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
GE A L++L+P +SG+Y +LSN+YA +GRW + +RK M GV+K PG S +E+
Sbjct: 414 GEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRN 473
Query: 458 RVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESDVAS 506
V+EFV GD SHP+ D++Y++L I +++ + H N + + + + S
Sbjct: 474 SVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIEDEEKES 525
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 36/270 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYL--YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
G + A+ +F P+ L +N+ + P + ++ ++ PD ++
Sbjct: 171 GLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVS 230
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL A ++ + LGR +H GL + H ALI +YA C + DARK+F E+ +
Sbjct: 231 VLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVG- 289
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
V W +++ G A + G+ +A+ LF M
Sbjct: 290 RTVVSWTSLIVGLA--------------------------VNGFGM-----DALQLFSMM 318
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
+ E + P EI M+ L AC+ G V+ G + +YG+ + ++D+ ++G+
Sbjct: 319 EREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGR 378
Query: 261 IGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ +A M + + W T++ A+H
Sbjct: 379 VEEAHNYITTMPLEPNAVVWRTLLGACAMH 408
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/436 (41%), Positives = 258/436 (59%), Gaps = 12/436 (2%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F DV + T I + A+++Y + S L + ++
Sbjct: 481 GLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLV 540
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L+ I G ++H V G D + +I YA+C + D + E+ + +
Sbjct: 541 SACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACG-MMDLACLQFEVGAKD-H 598
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN +V+G+ K ++ AR +F+ M E++V SW+T+I+GYAQ DQ A+ LF +M
Sbjct: 599 LESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVA 658
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMYAKSG 259
+KP+E+ M++ SA A LG ++ G W H YI N +PLN+ ALIDMYAK G
Sbjct: 659 SGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYI----CNESIPLNDNLRAALIDMYAKCG 714
Query: 260 KIGKALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
I ALQ F +++K SV W +I GLA HG LD+FS M+R +KPN ITFI +
Sbjct: 715 SINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGV 774
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
LSACCH GLVE GRR F IMKS Y +EP I+ YGCM+DLLGRAG L+EAE+++R MP +A
Sbjct: 775 LSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKA 834
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
+ IWG+LLAA +GDV +GE A + L L P + G +LSNIYA GRW + +R+
Sbjct: 835 DIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRR 894
Query: 438 VMRDMGVKKMPGCSYI 453
+++ +++MPGCS +
Sbjct: 895 AIQNQRMERMPGCSGV 910
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 169/339 (49%), Gaps = 33/339 (9%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F Y T I L Q + A+ ++ +++ + P++ + V+
Sbjct: 349 GQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVI 408
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A I R IH + ++ V V L++ Y C + +AR++FD + N
Sbjct: 409 YACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMP--EVN 466
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN M+ GYAK G ++ AR LFE + +K+VISW T+I GY M++ +EA+ ++R M
Sbjct: 467 LVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLR 526
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-------TIVPLN-------- 248
+ +EI ++ +SAC +L A+ G +H + + G + TI+
Sbjct: 527 SGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDL 586
Query: 249 ----------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
NAL+ + K+ + +A ++F++M + V +W+TMI+G A
Sbjct: 587 ACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQS 646
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
R AL++F +M + +KPNE+T +++ SA +G ++ GR
Sbjct: 647 RIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGR 685
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 143/282 (50%), Gaps = 34/282 (12%)
Query: 72 LRPDNYSFPFVLKAVVK-LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
L ++Y L + +K S+ GR++H + GL S+ + +LI MYA I DA
Sbjct: 264 LHQNHYECELALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDA 323
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
+ +FD + N N MV GYAK G L+NAR LF++M +K +S+TT+I G Q +
Sbjct: 324 QLLFD--ACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNEC 381
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH----------------N 234
EA+ +F+ M+ + V P+++ ++ + AC+ G + IH N
Sbjct: 382 FREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTN 441
Query: 235 YIEQYGL-----------NTIVPLN----NALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+ Y L + + +N N +++ YAK+G + A ++FE + +K VI+W
Sbjct: 442 LMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISW 501
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
TMI G L EAL M+ M R+ + NEI + ++SAC
Sbjct: 502 GTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSAC 543
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+S+++ + P I +F ++ +N E+A+++AL C+ + G +H+
Sbjct: 237 VSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYECELALVSALKYCS---SSSQGRQLHS 293
Query: 235 YIEQYGLNTIVPLNNALIDMYAK-------------------------------SGKIGK 263
+ + GL++ + N+LI+MYAK +G++
Sbjct: 294 LVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDN 353
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A ++F+ M +K +++TTMI GL + REAL++F M V PN++T + ++ AC H
Sbjct: 354 ARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSH 413
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G + L R + + + +E + ++ + EA +L RMP E N W
Sbjct: 414 FGEI-LNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMP-EVNLVSWN 471
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+L N Y L + A + ++ + ++ + + Y ++ R +E+ + + M G
Sbjct: 472 VML---NGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSG 528
Query: 444 V 444
+
Sbjct: 529 L 529
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 287/489 (58%), Gaps = 6/489 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+VR + N +++ + +G D A + F ++ D+ +N+ I Q L A
Sbjct: 207 MVVRDISSWNAMIALHM----QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +++K ++ S L PD ++ VL A L + +G++IH V TG D V+ ALI
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY+ C + AR++ ++ + + + ++ GY K+GD+N A+ +F + +++V++WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q EAI LFR M +P+ + A LS + L ++ G+ IH +
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDM 298
G V ++NALI MYAK+G I A + F+ ++ + ++WT+MI LA HG EAL++
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M ++P+ IT++ + SAC H GLV GR+YF++MK I P + Y CM+DL G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG LQEA++ + +MP E + WGSLL+A ++ +++LG+ A + L+ LEP NSG Y+
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+Y+ G+W E+ KIRK M+D VKK G S+IEV +VH F D +HP+ + +Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 682
Query: 479 LCKINGQMK 487
+ KI ++K
Sbjct: 683 MKKIWDEIK 691
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 166/308 (53%), Gaps = 37/308 (12%)
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+HC+ + +GL V+++ L+ +Y+ ARK+FDE+ LR WNT+++ Y+K
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR--TAFSWNTVLSAYSKR 93
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
GD+++ F+ + +++ +SWTT+I GY + Q ++AI + M E ++P + + L
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------------------ 259
++ A +E G+ +H++I + GL V ++N+L++MYAK G
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 260 ----------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-A 305
++G+ A+ FE M + ++TW +MI+G G ALD+FS+M R +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 306 RVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ P+ T ++LSAC ++ + +G++ + +I+ + + I + +I + R G ++
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVE 331
Query: 365 EAEKLLRR 372
A +L+ +
Sbjct: 332 TARRLIEQ 339
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 190/411 (46%), Gaps = 39/411 (9%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G D F + D + T I A+ + + + P ++
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VL +V +E G+++H V GL +V V +L+ MYA C A+ VFD + +R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+++ WN M+A + +VG ++ A A FE M E+++++W ++I+G+ Q A+ +F +
Sbjct: 211 --DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 201 MQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M ++ + PD + + LSACA L + +G+ IH++I G + + NALI MY++ G
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 260 ------------------------------KIG---KALQVFENMKNKSVITWTTMIAGL 286
K+G +A +F ++K++ V+ WT MI G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 287 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEP 345
HG EA+++F M +PN T A+LS + + G++ + + +KS G
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS--GEIY 446
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ +I + +AG + A + + E + W S++ A +G E
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/157 (17%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
N ++ Y+K G + + F+ + + ++WTTMI G G +A+ + M + ++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P + T +L++ +E G++ + + + G+ + ++++ + G A+
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFI-VKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ RM + + W +++A G ++L + +
Sbjct: 203 VFDRMVVR-DISSWNAMIALHMQVGQMDLAMAQFEQM 238
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 267/461 (57%), Gaps = 33/461 (7%)
Query: 31 SIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
++F P + YN+ I+AL + + ++A + RP++++ F LKA +
Sbjct: 81 NLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 140
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
GR++H Q + GL + +V L+ +YA C+ + AR VFD ++ N+ W+ M
Sbjct: 141 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDK-NLVAWSAM 199
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V+GY++VG +N EA+ LFR MQ V+PDE
Sbjct: 200 VSGYSRVGMVN-------------------------------EALGLFREMQAVGVEPDE 228
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ M++ +SACA+ GA++LG+W+H YI++ G+ + L+ ALIDMYAK G I +A VF+
Sbjct: 229 VTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDA 288
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M K W+ MI G A+HGL +AL +FSRM +V+PN +TFI +LSAC H GLVE G
Sbjct: 289 MVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDG 348
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
RRY++IM++ GI+P +E YGCM+DLL R+G L +A + MP N+ IW +LL A
Sbjct: 349 RRYWSIMQN-LGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACK 407
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
+++ E A + L++LEPHN NY +LSN+YA +W+ +R+ M+ V + G
Sbjct: 408 SSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGR 467
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
S IE++ +HEFV D SHP+ + +L ++ +++ A H
Sbjct: 468 SSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGH 508
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/498 (36%), Positives = 281/498 (56%), Gaps = 40/498 (8%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L F C+SL A+ +F K +++L+N I+A A+ LY+++ L
Sbjct: 99 LVNFYSVCNSL---RNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGL 155
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+PDN++ PFVLKA LSTI GR IH + + +G + DV V AAL+ MYA C C+ DAR
Sbjct: 156 KPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARH 215
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD++ R + +WN+M+A YA+ G P+
Sbjct: 216 VFDKIVDR--DAVLWNSMLAAYAQNG-------------------------------HPD 242
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
E+++L M + V+P E ++ +S+ A + + G IH + ++G + ALI
Sbjct: 243 ESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALI 302
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G + A +FE ++ K V++W +I G A+HGL EALD+F RM + +P+ I
Sbjct: 303 DMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHI 361
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ L+AC L++ GR +N+M I P +E Y CM+DLLG G L EA L+R+
Sbjct: 362 TFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQ 421
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
M ++ +WG+LL + +G+VEL E AL+ LI+LEP +SGNY IL+N+YA G+W
Sbjct: 422 MDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGV 481
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
++R++M D G+KK CS+IEV +V+ F++GD SHP+ +Y L ++ G M+ A ++
Sbjct: 482 ARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYV 541
Query: 493 QNE---FSGVLESDVASM 507
+ F V E + M
Sbjct: 542 PDTGSVFHDVEEDEKTDM 559
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 144/334 (43%), Gaps = 36/334 (10%)
Query: 61 VILYNKIQASALRPDN-YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+I +K+ + P N Y + +L++ + +E G+++H + G+ ++ + L+
Sbjct: 42 LIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVN 101
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
Y+ C L NA LF+ + + N+ W
Sbjct: 102 FYSVCN---------------------------------SLRNAHHLFDKIPKGNLFLWN 128
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI YA AI+L+ +M +KPD + L AC+ L + G IH + +
Sbjct: 129 VLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRS 188
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G V + AL+DMYAK G + A VF+ + ++ + W +M+A A +G E+L +
Sbjct: 189 GWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLC 248
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M V+P E T + ++S+ + + GR R+G + + +ID+ +
Sbjct: 249 CEMAAKGVRPTEATLVTVISSSADIACLPHGREIHG-FGWRHGFQYNDKVKTALIDMYAK 307
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G ++ A L R+ E W +++ ++G
Sbjct: 308 CGSVKVACVLFERLR-EKRVVSWNAIITGYAMHG 340
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G +++ + + +D + G A +F D L+N+ + A Q +P +
Sbjct: 185 VIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDES 244
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L ++ A +RP + V+ + ++ + GREIH G + V ALI M
Sbjct: 245 LSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDM 304
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A +F+ LR V WN ++ GYA G
Sbjct: 305 YAKCGSVKVACVLFER--LREKRVVSWNAIITGYAMHG---------------------- 340
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQY 239
EA+ LF RM E +PD I + AL+AC++ ++ G ++N +
Sbjct: 341 ---------LAVEALDLFERMMKE-AQPDHITFVGALAACSRGRLLDEGRALYNLMVRDC 390
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREA 295
+N V ++D+ G++ +A + M W ++ HG L A
Sbjct: 391 RINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVA 450
Query: 296 LDMFSRME 303
L+ +E
Sbjct: 451 LEKLIELE 458
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 185/487 (37%), Positives = 289/487 (59%), Gaps = 22/487 (4%)
Query: 9 NNHLLSRFIDSCSSLGFSDY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
NN LL+ + GF D AY +F D +NT I + + ++ +
Sbjct: 156 NNALLNFYC------GFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGE 209
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHC---QTVGTGLDSDVHVVAALIQMYAS 123
++ +RPD Y+F +L L +GR++H + +G +V +V L+ MYA
Sbjct: 210 MRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGC-FGGNVLLVNKLVDMYAK 268
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + A V + VA W ++V+ YA G++ AR LF+ M E++V+SWT +I+
Sbjct: 269 CGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMIS 328
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-GLN 242
GY+ EA+ LF +++ +KPDE+A++AALSACA+LGA+ELG IH QY G N
Sbjct: 329 GYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIH---RQYAGEN 385
Query: 243 TIVPLN----NALIDMYAKSGKIGKALQVFENMKN--KSVITWTTMIAGLALHGLGREAL 296
+N +A++DMYAK G I AL VF + K+ + ++I+GLA HG G A
Sbjct: 386 WTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAK 445
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++F M +KP+ ITF+A+LSAC H GLV+ G++ F M + YG+ P++E YGCM+DL
Sbjct: 446 NLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDL 505
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG+L EA +L+ +MPF+ANA IW +LL+A ++GDV L A L++L+ + Y
Sbjct: 506 LGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQHDHGAGY 565
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSN+ + + +E+ +RK + ++G++K PG SY+E+++ +H+F+AGD SHP+
Sbjct: 566 VMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAKTTE 625
Query: 477 QILCKIN 483
+L IN
Sbjct: 626 LMLRDIN 632
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 223/475 (46%), Gaps = 98/475 (20%)
Query: 1 MIVRGLDQNNHL---LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+IV G N HL L F S SS +++++FT + PD++L+N IKA Q +P
Sbjct: 37 IIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDIFLWNAIIKAYSQIHSP 96
Query: 58 -LNAVILYNKIQASALRPDNYSFPFVLKAV--VKLSTIELGREIHCQTVGTGLDSDVHVV 114
+ L+ + S++ PD+++FPF+LKA V +S + G ++HC + G SDV V
Sbjct: 97 PQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVN 156
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AL+ Y + +A KVFDE +R + +NTM+ G+A+ GD++
Sbjct: 157 NALLNFYCGFGDVVNAYKVFDESFVR--DCVSFNTMINGFARKGDVSG------------ 202
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+F M+ V+PDE +A LS C+ L +G +H
Sbjct: 203 -------------------CFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHG 243
Query: 235 YIEQ----YGLNTIVPLNNALIDMYAKSGKI------------GKAL------------- 265
+ + +G N + L N L+DMYAK G++ GK++
Sbjct: 244 LVYRELGCFGGNVL--LVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYAL 301
Query: 266 --------QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
++F+ M + V++WT MI+G + G +EAL++F ++E +KP+E+ +A
Sbjct: 302 RGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAA 361
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC---------MIDLLGRAGYLQEAEK 368
LSAC +G +ELGRR I + G E + C ++D+ + G + A
Sbjct: 362 LSACARLGALELGRR---IHRQYAG-----ENWTCSINRGFTSAVVDMYAKCGSIDIALD 413
Query: 369 LLRRMPFEANAA-IWGSLLAASNIYGDVELGECALQH--LIKLEPHNSGNYAILS 420
+ R+ + ++ S+++ +G E + + L+ L+P N A+LS
Sbjct: 414 VFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLS 468
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 174/369 (47%), Gaps = 24/369 (6%)
Query: 119 QMYASCKCIYDARKVFDELSL--RVWNVAVWNTMVAGYAKVGDLNNAR---ALFELMTEK 173
+ +SCK + A +++ + + R N+ + T+ YA + LF +T
Sbjct: 19 SLLSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNP 78
Query: 174 NVISWTTLIAGYAQMDQPNE-AITLFRRMQVENVKPDEIAMLAALSACAQ--LGAVELGE 230
++ W +I Y+Q+ P + +LF+ M +V PD L ACA + A + G
Sbjct: 79 DIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGF 138
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+H ++ + G + V +NNAL++ Y G + A +VF+ + +++ TMI G A G
Sbjct: 139 QVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKG 198
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG-IEPKIEQ 349
+F M V+P+E TF+A+LS C + +GR+ ++ G +
Sbjct: 199 DVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLL 258
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRM-PFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
++D+ + G L AE +L + P ++ A W SL++A + G+V++ A + ++
Sbjct: 259 VNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKV---ARRLFDQM 315
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IEVSK 457
+ ++ + + Y+ G + E+ ++ + +G+K + C+ +E+ +
Sbjct: 316 GERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGR 375
Query: 458 RVHEFVAGD 466
R+H AG+
Sbjct: 376 RIHRQYAGE 384
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 278/479 (58%), Gaps = 38/479 (7%)
Query: 13 LSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN-PLNAVILYNKIQA 69
LS+ + C S G +YA S+F P+++ +N+ IK Q + L+ K+
Sbjct: 25 LSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTE 84
Query: 70 SALR-PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
+ P++++ FVLKA ++ G ++H + G S + V +L+ Y C+ I
Sbjct: 85 TGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIG 144
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
ARKVF+E+ +R N+ W M++G+A+VG +
Sbjct: 145 FARKVFEEMPVR--NLVAWTAMISGHARVGAV---------------------------- 174
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+EA+ LFR MQ ++PD + +++ +SACA GA+++G W+H YIE+Y + T + L+
Sbjct: 175 ---DEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELS 231
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
AL+DMYAK G I +A QVF +M K W++MI G A HGL ++A+D F +M V
Sbjct: 232 TALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVT 291
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P+ +TF+A+LSAC H GLV GRR++++M +GIEP +E YGC +DLL R+G ++EA +
Sbjct: 292 PDHVTFLAVLSACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYR 350
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
+ M NAA W SLL + LGE ++L++LEP N+ NY ++SN+Y+ L +
Sbjct: 351 ITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQ 410
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
W + ++RKVM++ +K +PGCS IEV VHEFV GD SHP+ L + + +++ +++
Sbjct: 411 WEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVR 469
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + +D + G + A +F H D +++ I +A+ + ++ +
Sbjct: 230 LSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETE 289
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
+ PD+ +F VL A + GR + G++ V + + + +A
Sbjct: 290 VTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAY 349
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLN----NARALFEL--MTEKNVISWTTLIAGY 185
++ + + N A W +++ G K LN AR L EL + +N I + L +
Sbjct: 350 RITTTMKIPP-NAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSL 408
Query: 186 AQMDQPNEAITLFRRMQVENVKP 208
+Q ++ +E L + M+ + +KP
Sbjct: 409 SQWEKMSE---LRKVMKEKCIKP 428
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 266/448 (59%), Gaps = 1/448 (0%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
DV + + I A + + AV + + + + PD + VL A KL +ELGR +H
Sbjct: 203 DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLH 262
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
G+ + ++V ALI MYA C A++VFD L R WN ++ GY K G
Sbjct: 263 LLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALG-RGPRPQSWNAIIDGYCKHGH 321
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
++ AR+LF+ M +++I++ +++ GY Q EA+ LF M+ +++ D ++ L+A
Sbjct: 322 VDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTA 381
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
CA LGA++ G +H IEQ + + L AL+DMY K G++ +A VF+ M + V TW
Sbjct: 382 CASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTW 441
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
T MIAGLA +G+G+ AL+ F +M +PN +++IA+L+AC H L+ GR YF+ M+
Sbjct: 442 TAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRI 501
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
Y I P+IE YGCMIDLLGR+G L EA L++ MP + NA IW S+L+A ++ ++L +
Sbjct: 502 LYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQ 561
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
CA +HL+KLEP G Y L NIY +W + KIR +M + VKK G S I V+ +V
Sbjct: 562 CAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQV 621
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMK 487
H+FV D SHP + +L +I+ ++K
Sbjct: 622 HKFVVSDKSHPRILEIIAMLEEISHRLK 649
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 220/435 (50%), Gaps = 50/435 (11%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQT-DNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA +F + P +L++T ++A + +P +L+ +++ + +RPD ++F F+ K
Sbjct: 55 YALHLFD-RMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCS 113
Query: 87 V---KLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARKVFDELSLRVW 142
+ ++ L +H + T L S V+ +LI MY DAR+ FDE+ ++
Sbjct: 114 SSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK-- 171
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ W +++G AK+G L + + L ++VISWT+LIA Y++ ++ EA+ F+ M
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ PDE+ ++A LSACA+L +ELG +H +E+ G+ T L ALIDMYAK G G
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291
Query: 263 KALQV--------------------------------FENMKNKSVITWTTMIAGLALHG 290
A QV F+ M+ + +IT+ +M+ G G
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
REAL +F M R ++ + T + +L+AC +G ++ GR ++ R +E I
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL-VEADIYLG 410
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL-- 408
++D+ + G + EA + +RM + + W +++A G +G+ AL+H ++
Sbjct: 411 TALLDMYMKCGRVDEATIVFQRMG-KRDVHTWTAMIAGLAFNG---MGKAALEHFYQMRC 466
Query: 409 ---EPHNSGNYAILS 420
+P++ A+L+
Sbjct: 467 DGFQPNSVSYIAVLT 481
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 119/284 (41%), Gaps = 53/284 (18%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
ID G D A S+F D+ +N+ + + A++L+ ++ LR DN
Sbjct: 313 IDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDN 372
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++ +L A L ++ GR +H +++D+++ AL+ MY C + +A VF
Sbjct: 373 FTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQR 432
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R +V W M+AG A G G A ++
Sbjct: 433 MGKR--DVHTWTAMIAGLAFNG------------------------MGKAALEH------ 460
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW----------IHNYIEQYGLNTIVP 246
F +M+ + +P+ ++ +A L+AC+ + G IH IE YG
Sbjct: 461 -FYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYG------ 513
Query: 247 LNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ID+ +SG + +A+ + + M + + W ++++ +H
Sbjct: 514 ---CMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVH 554
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 38/276 (13%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L A LF+ M + T L A P+ LFRRM+ V+PD L
Sbjct: 53 LRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFT-FHFLFK 111
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVP-----LNNALIDMYAKSGKIGKALQVFENMKNK 274
C+ + + + L T++P ++N+LI MY + G A + F+ + K
Sbjct: 112 CSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK 171
Query: 275 SVITWTTMIAGLALHGL-------------------------------GREALDMFSRME 303
+ WT +I+GLA G+ REA+ F M
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ P+E+T IA+LSAC + +ELGR +++ G+ +ID+ + G
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRS-LHLLVEEKGMPTSENLVVALIDMYAKCGDF 290
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
A+++ + W +++ +G V++
Sbjct: 291 GHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVAR 326
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 267/458 (58%), Gaps = 3/458 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + + + + + ++ G + A +F D+ + + CQ N A++L+
Sbjct: 99 GAEVDGFVGTALVRAYAACGRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLF 158
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ S + PD VL + G+ IH + + D V AL+ MYASC
Sbjct: 159 HSMKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASC 218
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A K+++ +S + + + TMV GYAK G + A ++F M K+V+SW+ +IAG
Sbjct: 219 ADMEMAEKLYNRVSEK--EIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAG 276
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YA+ +P EA+ LF MQ VKPDEI ML+ +SACA +GA+E IH+++E + + I
Sbjct: 277 YAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKI 336
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+P+ NALIDM++K G + AL VF M K+V+TWT++I A+HG GR AL +F M+
Sbjct: 337 LPIGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKS 396
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++PN +TF+ +L ACCH GLVE GR F IM +Y IEP E YGCM+DLLGRA L
Sbjct: 397 EGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLG 456
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
+A L++ M N IWGSLLAA ++GD+ELG A + +++L+P++ G +LSNIYA
Sbjct: 457 QAADLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYA 516
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEF 462
G WN+ K +D KK ++E+S + F
Sbjct: 517 EYGNWNDV-KEGLSKKDYEKKKELAARFLEISADLSNF 553
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 156/353 (44%), Gaps = 68/353 (19%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
P + P +L+A+ ++ H G + D V AL++ YA+C + DAR+V
Sbjct: 67 PGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVEDARRV 126
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
FD + R ++++W ++ Y Q E
Sbjct: 127 FDGMPDR---------------------------------DLVAWGVMLDCYCQARNYEE 153
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
A+ LF M+ V PD++ + LS CA + G+ IH+Y+ ++ AL++
Sbjct: 154 ALLLFHSMKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMN 213
Query: 254 M-------------------------------YAKSGKIGKALQVFENMKNKSVITWTTM 282
M YAK+GK+ A +F M K V++W+ M
Sbjct: 214 MYASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAM 273
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
IAG A EAL++F M+R+ VKP+EIT ++++SAC +VG +E R + +++
Sbjct: 274 IAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSM 333
Query: 343 IEPKIEQYG-CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
KI G +ID+ + G L A + MP + N W S++ AS ++GD
Sbjct: 334 C--KILPIGNALIDMFSKCGSLTLALDVFNAMP-QKNVVTWTSIITASAMHGD 383
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 264/449 (58%), Gaps = 6/449 (1%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQT 102
++N I Q+ A L+ ++ + + PD ++F +L A G+ +H Q
Sbjct: 263 VWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQF 322
Query: 103 VGTGLD----SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
+ D + + V AL+ +Y+ I A K+FD ++L+ +V WNT+++GY + G
Sbjct: 323 IRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLK--DVVSWNTILSGYIESG 380
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
L+NA +F+ M K+ +SW +++GY +A+ LF +M+ E+VKP + A++
Sbjct: 381 CLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVA 440
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
AC +LGA++ G+ +H ++ Q G NAL+ MYA+ G + A VF M N ++
Sbjct: 441 ACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVS 500
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W MI+ L HG GREAL++F +M + P+ I+F+ IL+AC H GLV+ G +YF M+
Sbjct: 501 WNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESME 560
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+GI P + Y +IDLLGRAG + EA L++ MPFE AIW ++L+ I GD+ELG
Sbjct: 561 RDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELG 620
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
A L K+ P + G Y +LSN Y+ GRW ++ ++RK+MRD GVKK PGCS+IEV +
Sbjct: 621 AYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNK 680
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMK 487
VH F+ GDT HPD +Y+ L + +M+
Sbjct: 681 VHVFLVGDTKHPDAHEVYRFLEMVGAKMR 709
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 193/399 (48%), Gaps = 46/399 (11%)
Query: 37 SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS--ALRPDNYSFPFVLKAVVKLSTIEL 94
++ D L+N I A + AV ++ + AS +LRPD+YSF +L AV ++ + +
Sbjct: 118 ARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAV 177
Query: 95 GR--EIHCQTVGTGLDSDVHVVAALIQMYASCKC---IYDARKVFDELSLRVWNVAVWNT 149
++HC G + + V ALI +Y C DARKV DE+ + + W T
Sbjct: 178 SHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEK--DELTWTT 235
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+V G+ + GD++ AR+ FE + + + W +I+GY Q EA LFRRM + + PD
Sbjct: 236 IVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPD 295
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
E + LSACA G G+ +H + +P+NNAL+ +Y+KSGKI A
Sbjct: 296 EFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVAT 355
Query: 266 QVFENMKNKSVITWTT-------------------------------MIAGLALHGLGRE 294
++F++M K V++W T M++G GL +
Sbjct: 356 KIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAED 415
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
AL +F++M VKP + T+ ++AC +G ++ G++ + + G E ++
Sbjct: 416 ALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQ-LHAHLVQCGFEASNSAGNALL 474
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ R G +++A + MP ++ W ++++A +G
Sbjct: 475 TMYARCGAVKDARLVFLVMP-NVDSVSWNAMISALGQHG 512
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 129/313 (41%), Gaps = 73/313 (23%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+L+ YA + D+ FD + + + + N M++ +A+
Sbjct: 94 SLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFAR------------------- 134
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQV--ENVKPDEIAMLAALSACAQLG--AVELGEW 231
A + P A+++FR + ++++PD+ + + LSA Q+ AV
Sbjct: 135 ----------ASLAAP--AVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQ 182
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIG---KALQVFENMKNKSVITWTT------- 281
+H + + G ++ ++NALI +Y K G A +V + M K +TWTT
Sbjct: 183 LHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVR 242
Query: 282 ------------------------MIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
MI+G G+ EA ++F RM R+ P+E TF ++
Sbjct: 243 KGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSL 302
Query: 318 LSACCHVGLVELGRRY---FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
LSAC + G G+ F ++ + E + ++ L ++G + A K+ M
Sbjct: 303 LSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMT 362
Query: 375 FEANAAIWGSLLA 387
+ + W ++L+
Sbjct: 363 LK-DVVSWNTILS 374
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 266/448 (59%), Gaps = 1/448 (0%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
DV + + I A + + AV + + + + PD + VL A KL +ELGR +H
Sbjct: 203 DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLH 262
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
G+ + ++V ALI MYA C A++VFD L R WN ++ GY K G
Sbjct: 263 LLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALG-RGPRPQSWNAIIDGYCKHGH 321
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
++ AR+LF+ M +++I++ +++ GY Q EA+ LF M+ +++ D ++ L+A
Sbjct: 322 VDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTA 381
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
CA LGA++ G +H IEQ + + L AL+DMY K G++ +A VF+ M + V TW
Sbjct: 382 CASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTW 441
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
T MIAGLA +G+G+ AL+ F +M +PN +++IA+L+AC H L+ GR YF+ M+
Sbjct: 442 TAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRI 501
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
Y I P+IE YGCMIDLLGR+G L EA L++ MP + NA IW S+L+A ++ ++L +
Sbjct: 502 LYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQ 561
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
CA +HL+KLEP G Y L NIY +W + KIR +M + VKK G S I V+ +V
Sbjct: 562 CAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQV 621
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMK 487
H+FV D SHP + +L +I+ ++K
Sbjct: 622 HKFVVSDKSHPRILEIIAMLEEISHRLK 649
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 220/435 (50%), Gaps = 50/435 (11%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQT-DNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA +F + P +L++T ++A + +P +L+ +++ + +RPD ++F F+ K
Sbjct: 55 YALHLFD-RMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCS 113
Query: 87 V---KLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARKVFDELSLRVW 142
+ ++ L +H + T L S V+ +LI MY DAR+ FDE+ ++
Sbjct: 114 SSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK-- 171
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ W +++G AK+G L + + L ++VISWT+LIA Y++ ++ EA+ F+ M
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ PDE+ ++A LSACA+L +ELG +H +E+ G+ T L ALIDMYAK G G
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291
Query: 263 KALQV--------------------------------FENMKNKSVITWTTMIAGLALHG 290
A QV F+ M+ + +IT+ +M+ G G
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
REAL +F M R ++ + T + +L+AC +G ++ GR ++ R +E I
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL-VEADIYLG 410
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL-- 408
++D+ + G + EA + +RM + + W +++A G +G+ AL+H ++
Sbjct: 411 TALLDMYMKCGRVDEATIVFQRM-GKRDVHTWTAMIAGLAFNG---MGKAALEHFYQMRC 466
Query: 409 ---EPHNSGNYAILS 420
+P++ A+L+
Sbjct: 467 DGFQPNSVSYIAVLT 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 53/285 (18%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID G D A S+F D+ +N+ + + A++L+ ++ LR D
Sbjct: 312 IIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVD 371
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
N++ +L A L ++ GR +H +++D+++ AL+ MY C + +A VF
Sbjct: 372 NFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQ 431
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ R +V W M+AG A G G A ++
Sbjct: 432 RMGKR--DVHTWTAMIAGLAFNG------------------------MGKAALEH----- 460
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW----------IHNYIEQYGLNTIV 245
F +M+ + +P+ ++ +A L+AC+ + G IH IE YG
Sbjct: 461 --FYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYG----- 513
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ID+ +SG + +A+ + + M + + W ++++ +H
Sbjct: 514 ----CMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVH 554
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 38/276 (13%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L A LF+ M + T L A P+ LFRRM+ V+PD L
Sbjct: 53 LRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFT-FHFLFK 111
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVP-----LNNALIDMYAKSGKIGKALQVFENMKNK 274
C+ + + + L T++P ++N+LI MY + G A + F+ + K
Sbjct: 112 CSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK 171
Query: 275 SVITWTTMIAGLALHGL-------------------------------GREALDMFSRME 303
+ WT +I+GLA G+ REA+ F M
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ P+E+T IA+LSAC + +ELGR +++ G+ +ID+ + G
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRS-LHLLVEEKGMPTSENLVVALIDMYAKCGDF 290
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
A+++ + W +++ +G V++
Sbjct: 291 GHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVAR 326
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 288/500 (57%), Gaps = 46/500 (9%)
Query: 24 GFSDY-----AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
GF+ + A +F +V +N I A Q + A+ L+ ++ ++ S
Sbjct: 242 GFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EKNSIS 297
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
+ V+ V++ ++ R++ Q +V A+I Y K + DAR++F+++S
Sbjct: 298 WTTVINGYVRMGKLDEARQLLNQMPY----RNVAAQTAMISGYVQNKRMDDARQIFNQIS 353
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
+R +V WNTM+AGY++ G ++ A LF+ M +K+++SW T++A YAQ+ Q + AI +F
Sbjct: 354 IR--DVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIF 411
Query: 199 RRMQVENV-------------------------------KPDEIAMLAALSACAQLGAVE 227
M+ +N+ KPD+ LS+CA L A++
Sbjct: 412 EEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQ 471
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
+G+ +H + + G T + ++NALI MYAK G I A +F+++ + V++W ++IA A
Sbjct: 472 VGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYA 531
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
L+G GREAL +F +ME V P+E+TF+ ILSAC HVGL++ G + F M Y IEP
Sbjct: 532 LNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLA 591
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
E Y CM+DLLGRAG L+EA +L+R M ANA IWG+LL A I+G++EL + A + L++
Sbjct: 592 EHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLE 651
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT 467
EPH + NY +LSN+ A GRW+E ++R++M++ G +K PG S+IE+ RVH F++ D
Sbjct: 652 FEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDP 711
Query: 468 SHPDFDRLYQILCKINGQMK 487
+HP L IL + M+
Sbjct: 712 AHPRAVELCHILRSLTAHMR 731
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
+ S + +G D A IF + ++ +N+ I L Q + L+A+ + + +PD
Sbjct: 395 VASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQ 454
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+F L + L+ +++G+++H + +G +D+ V ALI MYA C I A +F +
Sbjct: 455 STFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKD 514
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ ++V WN+++A YA G N R EA+
Sbjct: 515 IDH--FDVVSWNSLIAAYALNG---NGR----------------------------EALK 541
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMY 255
LF +M+VE V PDE+ + LSAC+ +G ++ G + ++ Y + + ++D+
Sbjct: 542 LFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLL 601
Query: 256 AKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
++G++ +A Q+ MK N + W ++ +HG
Sbjct: 602 GRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHG 637
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 150/315 (47%), Gaps = 26/315 (8%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
I +A KVF ++ + N N+M++ +AK G +++AR LF+ M ++N++SW ++IA Y
Sbjct: 31 IDEAIKVFQHMTHK--NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYL 88
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
D+ EA LF +M D + ++ + G + + N + Y N +
Sbjct: 89 HNDRVEEARQLFDKMPTR----DLYSWTLMITCYTRNGELAKARNLFNLLP-YKWNPVCC 143
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
NA++ YAK+ + +A ++F+ M K +++W +M+ G +G R L F M
Sbjct: 144 --NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERD 201
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V +++ ++ VG + +F + + P + M+ R G + EA
Sbjct: 202 V----VSWNLMVDGFVEVGDLNSSWEFFEKIPN-----PNTVSWVTMLCGFARFGKIAEA 252
Query: 367 EKLLRRMPFEANAAIWGSLLAA--SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
+L +MP N W +++AA N + D A+ +++ NS ++ + N Y
Sbjct: 253 RRLFDQMPIR-NVVAWNAMIAAYVQNCHVDE-----AISLFMEMPEKNSISWTTVINGYV 306
Query: 425 ILGRWNESGKIRKVM 439
+G+ +E+ ++ M
Sbjct: 307 RMGKLDEARQLLNQM 321
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 34/269 (12%)
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
+ F+E++ R +V WN MV G+ +VGDLN++ FE + N +SW T++ G+A+ +
Sbjct: 192 QFFEEMAER--DVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKI 249
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG---------EW---IHNYIEQY 239
EA LF +M + NV + A + C A+ L W I+ Y+
Sbjct: 250 AEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMG 309
Query: 240 GLNTIVPLNN-----------ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
L+ L N A+I Y ++ ++ A Q+F + + V+ W TMIAG +
Sbjct: 310 KLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQ 369
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
G EAL +F +M VK + +++ ++++ VG ++ + F MK E I
Sbjct: 370 CGRMDEALHLFKQM----VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK-----EKNIV 420
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
+ +I L + G +A K M E
Sbjct: 421 SWNSLISGLTQNGSYLDALKSFMLMGHEG 449
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
+N I KSG+I +A++VF++M +K+ +T +MI+ A +G +A +F M + +
Sbjct: 18 HNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI 77
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+++ ++++A H VE R+ F+ M +R + + MI R G L +A
Sbjct: 78 ----VSWNSMIAAYLHNDRVEEARQLFDKMPTR-----DLYSWTLMITCYTRNGELAKAR 128
Query: 368 KLLRRMPFEANAAIWGSLLAA 388
L +P++ N +++A
Sbjct: 129 NLFNLLPYKWNPVCCNAMVAG 149
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 280/483 (57%), Gaps = 9/483 (1%)
Query: 11 HLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
H+ S +D + + A +F + +V +N+ I Q A++L+ ++ A+
Sbjct: 187 HIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAA 246
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYD 129
PD + V+ A L+ GR++H V L D+ + AL+ MYA C ++
Sbjct: 247 GFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWE 306
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR +FD + R ++ +++ GYAK ++ +A+ +F M EKNVI+W LIA YAQ
Sbjct: 307 ARCIFDSMPSR--SIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNG 364
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ------YGLNT 243
+ EAI LF +++ +++ P L+AC + ++LG+ H ++ + +G +
Sbjct: 365 EEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPES 424
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V + N+L+DMY K+G I +VFE M + ++W MI G A +G ++AL +F RM
Sbjct: 425 DVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERML 484
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ P+ +T I +LSAC H GLV+ GRRYF+ M +GI P + Y CM+DLLGRAG+L
Sbjct: 485 CSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHL 544
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EAE+L+ MP E ++ +W SLL A ++ +VELGE L +L+P NSG Y +LSN+Y
Sbjct: 545 KEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMY 604
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A +G+W E ++R+ M+D GV K PGCS+IE+ ++++ F+A D HP + ++ L I
Sbjct: 605 AEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQ 664
Query: 484 GQM 486
+M
Sbjct: 665 MEM 667
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 185/416 (44%), Gaps = 77/416 (18%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNPLNAVILYNKI 67
N LLS + + LG D A ++F PD YN + AL + + +A+ +
Sbjct: 87 NALLSAY----ARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAM 142
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
A + YSF L A G ++H + DVH+ +AL+ MYA C+
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERP 202
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
DAR+VFD + R NV WN+++ Y + G +
Sbjct: 203 EDARRVFDAMPER--NVVSWNSLITCYEQNGPV--------------------------- 233
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG-LNTIVP 246
EA+ LF M PDE+ + + +SACA L A G +H ++ + L +
Sbjct: 234 ----GEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMV 289
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKS------------------------------- 275
LNNAL+DMYAK G+ +A +F++M ++S
Sbjct: 290 LNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKN 349
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YF 334
VI W +IA A +G EA+ +F +++R + P T+ +L+AC ++ ++LG++ +
Sbjct: 350 VIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHV 409
Query: 335 NIMKS--RYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++K R+ P+ + + ++D+ + G + + K+ RM N + W +++
Sbjct: 410 HVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMI 464
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 4/282 (1%)
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY 154
R H + + + + + ++ L+ YA + DAR+VFDE+ LR N +N +++ Y
Sbjct: 36 ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLR--NTFSYNALLSAY 93
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN--EAITLFRRMQVENVKPDEIA 212
A++G + ARALFE + + + S+ ++A A+ + + +A+ M ++ + +
Sbjct: 94 ARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYS 153
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ALSACA GE +H + + V + +AL+DMYAK + A +VF+ M
Sbjct: 154 FASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMP 213
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
++V++W ++I +G EAL +F M A P+E+T +++SAC + GR+
Sbjct: 214 ERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQ 273
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
M + + ++D+ + G EA + MP
Sbjct: 274 VHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 251/380 (66%), Gaps = 2/380 (0%)
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFEL 169
DV + ++ Y + + +AR+VFD +R ++ WNTM+ GYA G+++ AR +F
Sbjct: 105 DVFLCNVMLAAYVTRGEVAEARRVFD--GMRERDMVSWNTMIHGYAVNGEVDLAREVFNG 162
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M +++ SW+++++ Y + + +A+ L+R M+ V PD M++ LSAC+ +GA+ +G
Sbjct: 163 MDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVG 222
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+H ++E G+ V L ALIDMYAK G I +++VF +M K V+TW++MI GLA H
Sbjct: 223 AEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANH 282
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G G +AL +FSRM ++PNE+TFI +L +C H+GLV G++YF+ M +G+ PK++
Sbjct: 283 GFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQH 342
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
YGCM+DLLGR+G+++EA++L+R MPFE +A IW +LL A IY +VE+ E A+ L L+
Sbjct: 343 YGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLD 402
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
PH G+Y +LSNIYA W ++R+ +R ++++PG S IE +HEF++GD SH
Sbjct: 403 PHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSH 462
Query: 470 PDFDRLYQILCKINGQMKFA 489
P +Y++L ++ +++ A
Sbjct: 463 PRSKEIYKMLGEMMDRLRQA 482
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 35/264 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F D + +++ + A + +A+ L+ +++A+ + PD + VL
Sbjct: 151 GEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVL 210
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + + +G E+H G++ DV + ALI MYA C I ++ +VF S+ V +
Sbjct: 211 SACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFH--SMPVKD 268
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W++M+ G A G ++A++LF RM
Sbjct: 269 VLTWSSMIIGLANHG-------------------------------FGHDALSLFSRMLS 297
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E ++P+E+ + L +C LG V G ++ + +G+ V ++D+ +SG I
Sbjct: 298 EGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIE 357
Query: 263 KALQVFENMK-NKSVITWTTMIAG 285
+A Q+ +M + W ++
Sbjct: 358 EAKQLIRDMPFEPDAVIWRALLGA 381
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 186/480 (38%), Positives = 282/480 (58%), Gaps = 41/480 (8%)
Query: 14 SRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS- 70
++ ++ C SS G YA IF + P +N I+ + +P NAV Y + AS
Sbjct: 37 TKLLELCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASN 96
Query: 71 -ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
R D + F LKA + ++H Q + G ++DV L+Q
Sbjct: 97 GLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADV-----LLQ---------- 141
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
T++ YAK+GDL+ A+ LF+ M + ++ SW LIAG+AQ
Sbjct: 142 ------------------TTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGS 183
Query: 190 QPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+P +AI F+RM+V+ N++P+ + + AL AC+QLGA++ GE +H YI + LN+ V +
Sbjct: 184 RPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVC 243
Query: 249 NALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
N +IDMYAK G + KA VFENM+ +KS+ITW TMI A+HG G +ALD+F ++ R+ +
Sbjct: 244 NVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGM 303
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
P+ ++++A+L AC H GLVE G + FN M R G+EP I+ YG M+DLLGRAG L+EA
Sbjct: 304 SPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAY 362
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 427
++ +PF N +W +LL A YGDVE+ E A + L+++ + G++ +LSN+YA
Sbjct: 363 DIVSSLPF-PNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQ 421
Query: 428 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
RW++ G++R MR VKK PG SYIE+ ++++FV GD SH +Y L +IN ++K
Sbjct: 422 RWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIK 481
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + L + +D+ + +G D A +F +PD+ +N I Q P +A++ +
Sbjct: 133 GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTF 192
Query: 65 NKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+++ LRP+ + L A +L ++ G +H V L+S+V V +I MYA
Sbjct: 193 KRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAK 252
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + A VF+ + ++ WNTM+ +A GD
Sbjct: 253 CGSMDKAYWVFENMRCDK-SLITWNTMIMAFAMHGD------------------------ 287
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++A+ LF ++ + PD ++ LA L AC G VE G + N + Q GL
Sbjct: 288 -------GHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEP 340
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+ +++D+ ++G++ +A + ++ +++ W T++ +G
Sbjct: 341 NIKHYGSMVDLLGRAGRLKEAYDIVSSLPFPNMVLWQTLLGACRTYG 387
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 275/535 (51%), Gaps = 74/535 (13%)
Query: 27 DYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
D+A+S +F KP+V+ +N +A ++ P + LYN + + PDNYSFPFVLK
Sbjct: 76 DFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLK 135
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A +LS + GREIH T+ G+ DV V ALI ++SC + AR VFD L V +V
Sbjct: 136 ACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDV 195
Query: 145 AVWNTMVAGY------------------------------------AKVGDLNNARALFE 168
WN+M++GY ++G L+ + +
Sbjct: 196 VSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHG 255
Query: 169 LMTEK----NVISWTTLIAGYAQMDQPNEAITLF-------------------------- 198
L T +V ++LI Y++ Q +A +F
Sbjct: 256 LFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 315
Query: 199 -----RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
R MQ+ D + LSAC GA+ G WIH Y E+ + + NALI
Sbjct: 316 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIG 375
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEI 312
MY+K G I KAL++F + + +W+ +I+GLA++G +AL +FS+ME + ++PNEI
Sbjct: 376 MYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEI 435
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +L AC H G V+ G YFN M Y + P IE YGCM+DLLGRA L EAEK +R
Sbjct: 436 TFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRT 495
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
+P + + IW SLL A +G++EL E A + + +LEP G +LSN+YA RW +
Sbjct: 496 LPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDV 555
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++RK M +KK PGCS++E+ VHE D SHP+ +Y+ + IN ++
Sbjct: 556 KRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQ 610
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/486 (36%), Positives = 281/486 (57%), Gaps = 46/486 (9%)
Query: 5 GLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL + ++S+ I S S LG YA +IF + + ++ NT I+A ++ P+ A+
Sbjct: 33 GLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTTMDNPFVCNTMIRAYAKSVFPIKAIY 92
Query: 63 LYNKIQASALRPDNYSFPFVLKAV----------VKLSTIEL---GREIHCQTVGTGLDS 109
LYN + ++ D++ +PF LKA +K + +++ G EIHC+ GLD
Sbjct: 93 LYNFMHRKDIKSDHFMYPFGLKACARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQ 152
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRV---WNVAV-------------------- 146
D + +L+ +Y+ C + AR+VFDE++ + WNV +
Sbjct: 153 DCFIQNSLVYLYSQCGFLDLARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMP 212
Query: 147 ------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
WN ++A Y ++G + +A+A+F+ M E++ +SW ++IAGY Q+ A+ LFR
Sbjct: 213 GKNVVSWNMLIARYIRLGKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALALFRE 272
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M++ NV+ +I +++ L ACA+ GA+E+G IH ++Q L+NAL+DMYAK G
Sbjct: 273 MEIANVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGH 332
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAIL 318
+ A +VF +K K + W MI LA+HG EAL +FS ME + +PN +TFI +L
Sbjct: 333 LNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVL 392
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
AC H GLV+ GR++FN M + Y I P I+ YGCM+DLL R G L+EA +++ MPFEAN
Sbjct: 393 IACSHKGLVDEGRKFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEAN 452
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ +W +LL A ++ V+L E + Q L K+EP G+Y +LSNIYA RWN+ + K+
Sbjct: 453 SVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERASKI 512
Query: 439 MRDMGV 444
+ ++ V
Sbjct: 513 LANLIV 518
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 259/475 (54%), Gaps = 36/475 (7%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L R C S+ + A +F DV + I+ + N +A L+ +Q +
Sbjct: 304 LIRMYMGCGSI---EGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+PD ++ ++ A + + L REIH Q V G +D+ V AL+ MYA C
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKC-------- 412
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
G + +AR +F+ M+ ++V+SW+ +I Y +
Sbjct: 413 -------------------------GAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGE 447
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA F M+ NV+PD + + L+AC LGA++LG I+ + L + +P+ NALI
Sbjct: 448 EAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALI 507
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
+M K G I +A +FENM + V+TW MI G +LHG REALD+F RM + R +PN +
Sbjct: 508 NMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSV 567
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +LSAC G VE GRR+F+ + GI P +E YGCM+DLLGRAG L EAE L+ R
Sbjct: 568 TFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINR 627
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP + N++IW +LLAA IYG++++ E A + + EP++ Y LS++YA G W
Sbjct: 628 MPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENV 687
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K+RKVM GV+K GC++IEV ++H FV D SHP +Y L ++ +K
Sbjct: 688 AKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIK 742
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 189/416 (45%), Gaps = 66/416 (15%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F K DV +N I ++ + A L+ ++Q +P+ SF +L
Sbjct: 211 GSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSIL 270
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ G+ +H Q + TGL DV V ALI+MY C
Sbjct: 271 DGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGC------------------- 311
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
G + AR +F+ M ++V+SWT +I GYA+ +A LF MQ
Sbjct: 312 --------------GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E ++PD I + ++ACA + L IH+ + + G T + ++ AL+ MYAK G I
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A QVF+ M + V++W+ MI +G G EA + F M+R V+P+ +T+I +L+AC H
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477
Query: 324 VGLVELGR--------------------------RYFNIMKSRYGIEPKIEQ----YGCM 353
+G ++LG ++ +I ++RY E +++ + M
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVM 537
Query: 354 IDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
I G +EA L RM F N+ + +L+A + G VE G +L+
Sbjct: 538 IGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLL 593
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 45/416 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G N + L+ I S G A F V +N I Q + A
Sbjct: 87 IIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEA 146
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L+ ++ A+ P +F VL A + ++LG+E H Q + G SD + AL+ M
Sbjct: 147 FALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSM 206
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y K G ++ AR +F+ + +++V ++
Sbjct: 207 YV---------------------------------KGGSMDGARQVFDGLYKRDVSTFNV 233
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GYA+ +A LF RMQ E KP+ I+ L+ L C+ A+ G+ +H G
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTG 293
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L V + ALI MY G I A +VF+ MK + V++WT MI G A + +A +F+
Sbjct: 294 LVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFA 353
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+ ++P+ IT+I I++AC + L R + ++++ +G + ++ ++ + +
Sbjct: 354 TMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDT--ALVHMYAK 411
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ--HLIK---LEP 410
G +++A ++ M + W +++ A Y + GE A + HL+K +EP
Sbjct: 412 CGAIKDARQVFDAMS-RRDVVSWSAMIGA---YVENGCGEEAFETFHLMKRNNVEP 463
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 118 IQMYASCKCIYDA---RKVFDEL--SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
++++ C + DA ++V D + S R N+ NT++ ++ G++ AR F+ +
Sbjct: 65 VKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVEN 124
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
K V++W +IAGYAQ+ EA LFR+M E ++P I L L AC+ ++LG+
Sbjct: 125 KTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEF 184
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H + + G + + AL+ MY K G + A QVF+ + + V T+ MI G A G G
Sbjct: 185 HAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDG 244
Query: 293 REALDMFSRMERARVKPNEITFIAILSAC 321
+A +F RM++ KPN I+F++IL C
Sbjct: 245 EKAFQLFYRMQQEGFKPNRISFLSILDGC 273
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 66/114 (57%)
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C L LG+ + ++I Q G + N LI +++ G + +A Q F++++NK+V+TW
Sbjct: 71 CMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTW 130
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+IAG A G +EA +F +M ++P+ ITF+ +L AC ++LG+ +
Sbjct: 131 NAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEF 184
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 281/494 (56%), Gaps = 21/494 (4%)
Query: 5 GLDQNNHLLSRFIDSCS-SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
G Q + + I CS +L YA+ IF H P++YL+ I A + L
Sbjct: 33 GHSQTHFYAFKLIRFCSLNLSNLHYAHQIFNHIHSPNIYLFTAIITAFSSQQH--TTFKL 90
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ + S +RP+N+ +P VLK+V + ++L +H Q V G + V +L+ Y+
Sbjct: 91 FKTMLNSNIRPNNFIYPHVLKSVKERFLVDL---VHAQIVKCGFLNYPVVETSLVDSYSK 147
Query: 124 C-KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
+ DA KVFDE+S R N+ V+ +V+GY +VGD+ +F+ M +++V +W +I
Sbjct: 148 VLGGLRDAHKVFDEMSER--NIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVI 205
Query: 183 AGYAQMDQPNEAITLFRRMQV----------ENVKPDEIAMLAALSACAQLGAVELGEWI 232
+G Q +E I LFR M + KP+++ ++ LSAC G ++LG+WI
Sbjct: 206 SGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWI 265
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H Y+ ++G ++NAL+DMY K G + A +VFE + K + +W +MI ALHG
Sbjct: 266 HGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKC 325
Query: 293 REALDMFSRMER--ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
+A+ F +M V+P+E+TFI +L+AC H GLVE G YF +M YGIEP+I Y
Sbjct: 326 EDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHY 385
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GC+IDLLGRAG EA +++ M E + +WGSLL ++G +L E A + L++++P
Sbjct: 386 GCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDP 445
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
HN G +L+NIY LG+W+E + ++ K+PGCS+IEV +VH+F + D S+P
Sbjct: 446 HNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNP 505
Query: 471 DFDRLYQILCKING 484
+ LY IL + G
Sbjct: 506 KTEELYNILESLFG 519
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 278/466 (59%), Gaps = 11/466 (2%)
Query: 25 FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
F YA SIF H + + +++NT I+ Q +PL+AV Y + + + +NY+FP ++K
Sbjct: 55 FFSYARSIFRHLTNRNTFMHNTMIRGYLQCRSPLHAVSCYLSMLQNGVAVNNYTFPPLIK 114
Query: 85 AVVKL-----STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
A + L S I +GR +H V GL +D +VV+A I+ Y+ + + AR +FDE S
Sbjct: 115 ACIALLPSSPSNI-VGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSY 173
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ +V + MV GY K+G++ +AR +F+ M E+N +SW+ ++A Y+++ E + LF
Sbjct: 174 K--DVVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFT 231
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
MQ E +P+E ++ L+ACA LGA+ G W+H+Y ++ L + L AL+DMY+K G
Sbjct: 232 EMQNEGTEPNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKCG 291
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ AL VF+ + +K W MI+G AL+G ++L +F +M +R KPNE TF+A+L+
Sbjct: 292 CVESALSVFDCIVDKDAGAWNAMISGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVLT 351
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FE 376
AC H +V+ G F M S YG+ P++E Y C+IDLL RAG ++EAEK +
Sbjct: 352 ACTHAKMVQQGLWLFEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLTA 411
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
+A +WG+LL A I+ ++ +G + L+ + + G + + NIY G E+ K+R
Sbjct: 412 GDANVWGALLNACRIHKNIHVGNRVWKKLVDMGVTDCGTHVLTYNIYREAGWDVEANKVR 471
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
+ ++G+KK PGCS IEV V EF+AGD SHP + ++L I
Sbjct: 472 SRIEEVGMKKKPGCSIIEVDNEVEEFLAGDHSHPQAQEMCKLLDSI 517
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 34/259 (13%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + +D +G A +F + + ++ + A + + + L+ ++Q
Sbjct: 178 LGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQNEG 237
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
P+ VL A L + G +H L+S+ + AL+ MY+ C C+ A
Sbjct: 238 TEPNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKCGCVESAL 297
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VFD + + + WN M++G A GD AG
Sbjct: 298 SVFDCIVDK--DAGAWNAMISGEALNGD-----------------------AG------- 325
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNA 250
+++ LFR+M KP+E +A L+AC V+ G W+ + YG+ +
Sbjct: 326 -KSLQLFRQMAASRTKPNETTFVAVLTACTHAKMVQQGLWLFEEMSSVYGVVPRMEHYAC 384
Query: 251 LIDMYAKSGKIGKALQVFE 269
+ID+ +++G + +A + E
Sbjct: 385 VIDLLSRAGMVEEAEKFME 403
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 270/433 (62%), Gaps = 10/433 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F +P+ + YNT I+ ++ +P V L+N+++ + + PD ++F F++KA
Sbjct: 68 YAQRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARS 127
Query: 88 KL-------STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
++ ST+E EIH G S + V ALI +YA A +VF+E ++
Sbjct: 128 RVHKVHNFPSTLECD-EIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNE-TVG 185
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
V +V W+ +V + + G+L AR +F+ M EK+V+SWT +++GY++ + EA+ LF
Sbjct: 186 V-DVVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWE 244
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M ++PDE+ +++ +SAC LG VE G +H+YI + G +V L NALI+MYAK G
Sbjct: 245 MSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGC 304
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ +A +VF NMK KS+ITW +MI+ A HG +A ++FS M + + P+ ITF+A+L A
Sbjct: 305 VDRAWRVFNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIA 364
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
H GLV+ G R F IM+ YGIE IE YGC++D+LGRAG L+EA +L+ MP +N
Sbjct: 365 YTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDI 424
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+WG+LLAA IYGDV +GE ++ L++L+P G Y +L +IY GR E+ IR+ M+
Sbjct: 425 VWGALLAACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQ 484
Query: 441 DMGVKKMPGCSYI 453
+ G K PG S++
Sbjct: 485 ESGAMKNPGYSWV 497
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/484 (37%), Positives = 280/484 (57%), Gaps = 38/484 (7%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI--QASALRPDNYS 78
S G YA+ I S + + +NT I+A QT +P A+ L+ + Q ++ RPD ++
Sbjct: 39 SPAGDLTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFT 98
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
+PF+LK+ +L +G+++H +GL+SD +V LI MY+SC A KVF ++
Sbjct: 99 YPFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMR 158
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
R +V W +M+ G+ +++ RAL EAI LF
Sbjct: 159 DR--DVVSWTSMIDGF-----VDDDRAL--------------------------EAIRLF 185
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
M + V+P+E +++ L ACA GAV +G + IE+ + + ALIDMYAK
Sbjct: 186 EEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKC 245
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G IG A +VF+ + NK V WT MI+GLA HGL EA+ +F +ME ++P+E T A+L
Sbjct: 246 GSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVL 305
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
SAC + G G YFN M +YGI+P I+ YGCM+DLL R G+L EAE+ +R+MP E +
Sbjct: 306 SACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPD 365
Query: 379 AAIWGSLLAASNIYGDVELGECALQH--LIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
+W +L+ AS ++GD++ E ++ L+K++ + G+Y +L N+YA G+W++ K+R
Sbjct: 366 VVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMR 425
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
++M G+ K PGCS IEV VHEF AGD+ H + +++Y L ++ ++K AE +
Sbjct: 426 ELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLK-AEGYHPKL 484
Query: 497 SGVL 500
S VL
Sbjct: 485 SEVL 488
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 5/222 (2%)
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVKPD 209
A + GDL A + ++ +N T+I Y+Q P +A+ LF M Q + +PD
Sbjct: 36 AALSPAGDLTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPD 95
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ L +CA+L +G+ +H I + GL + ++N LI MY+ GK G+A +VF
Sbjct: 96 KFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFG 155
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M+++ V++WT+MI G EA+ +F M V+PNE T +++L AC G V +
Sbjct: 156 KMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGM 215
Query: 330 GRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
GRR +++ R G+E + +ID+ + G + A K+
Sbjct: 216 GRRVQGVIEERKIGLEANVRT--ALIDMYAKCGSIGSARKVF 255
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + ++ + I SS G S AY +F DV + + I D L A+ L+
Sbjct: 126 GLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLF 185
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + P+ + VL+A + +GR + + + +V ALI MYA C
Sbjct: 186 EEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKC 245
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I ARKVFD + + +V W M++G A G L E
Sbjct: 246 GSIGSARKVFDGIVNK--DVFAWTAMISGLANHG-------LCE---------------- 280
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
EA+TLF +M+ ++PDE M A LSAC G G + ++ +YG+
Sbjct: 281 --------EAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKP 332
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ ++D+ A++G + +A + M V+ W T+I +HG
Sbjct: 333 TIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHG 380
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/473 (38%), Positives = 272/473 (57%), Gaps = 2/473 (0%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPD 75
I S G D A F + DV +N I Q A+ +++K + S+ +PD
Sbjct: 218 ISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPD 277
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ L A L ++LG++IH + T D+ V ALI MY+ + A+K+ +
Sbjct: 278 KFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIE 337
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ + +V + ++ GY K+GD+N AR +F+ + ++V++WT +I GY Q +A+
Sbjct: 338 QSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAM 397
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LFR M E KP+ + LS + L +++ G IH + G + V ++NALI MY
Sbjct: 398 ELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMY 457
Query: 256 AKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
AKSG I A VF + + ITWT+MI LA HGLG EAL +F RM +KP+ IT+
Sbjct: 458 AKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITY 517
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+ +LSAC HVGLVE GR Y+N+M++ + I P Y CMIDL GRAG LQEA + MP
Sbjct: 518 VGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMP 577
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
E + WGSLLA+ ++ +VEL E A + L+ +EP NSG Y+ L+N+Y+ G+W +
Sbjct: 578 IEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAAN 637
Query: 435 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
IRK M+D GVKK G S++++ +VH F D HP D +Y+++ KI ++K
Sbjct: 638 IRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIK 690
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 176/323 (54%), Gaps = 37/323 (11%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L+ +K G+ IH + + GL V ++ L+ YA IYDA +VFDE+ ++
Sbjct: 20 LQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVK-- 77
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V WN +++GYAK G L A +FE M E + +SWT +I GY QM Q AI +FR M
Sbjct: 78 SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
++V P + + L++CA + + +G +H+++ ++GL++ + + N+L++MYAKSG
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV 197
Query: 263 KALQVFENMKNKS-------------------------------VITWTTMIAGLALHGL 291
A VF+ MK KS V++W MI+G HG
Sbjct: 198 TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGF 257
Query: 292 GREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQ 349
REALD+FS+M + KP++ T + LSAC ++ ++LG++ + +I+++ + +
Sbjct: 258 DREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN 317
Query: 350 YGCMIDLLGRAGYLQEAEKLLRR 372
+I + ++G ++ A+K++ +
Sbjct: 318 --ALISMYSKSGGVEIAQKIIEQ 338
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 202/408 (49%), Gaps = 40/408 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F +PD + I Q NA+ ++ ++ + + P ++ VL +
Sbjct: 98 AHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAA 157
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ + +GR++H V GL S + V +L+ MYA A+ VFD + L+ + + WN
Sbjct: 158 VECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLK--STSSWN 215
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVK 207
TM++ + + G ++ A+ FE M E++V+SW +I+GY Q EA+ +F +M ++ + K
Sbjct: 216 TMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSK 275
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--------- 258
PD+ + +ALSACA L ++LG+ IH +I + +T + NALI MY+KS
Sbjct: 276 PDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKI 335
Query: 259 ------------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
G I A ++F++++ + V+ WT MI G +G ++
Sbjct: 336 IEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQD 395
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+++F M + KPN T +LS + ++ GR+ + +R G + +I
Sbjct: 396 AMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQ-IHASATRSGNASSVSVSNALI 454
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
+ ++G + +A + + ++ + W S++ A +G LGE AL
Sbjct: 455 TMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHG---LGEEAL 499
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 278/540 (51%), Gaps = 73/540 (13%)
Query: 1 MIVRGLDQNNHLLSRFI-DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++ G QN L ++ I +C DYA +F K DV+L+NT I+
Sbjct: 52 VVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEE 111
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ LY+ + + L PDNY+FPFV+++ LS + G+E+HC V G DSDV V ++L+
Sbjct: 112 ALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVA 171
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNV 175
MY+ VF E+ +R N+ W ++AGY + +F M T+ N
Sbjct: 172 MYSQSGETLGMELVFGEMVVR--NIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNA 229
Query: 176 ISWTT-----------------------------------LIAGYAQMDQPNEAITLFRR 200
++ + LIA Y + A +LF
Sbjct: 230 VTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDG 289
Query: 201 MQVEN-------------------------------VKPDEIAMLAALSACAQLGAVELG 229
M V+N V D I M++ +SACA LGA+ G
Sbjct: 290 MVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTG 349
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
W+H +++ GL V + NALIDMYAK G I A +VFE + +SV++WT+MI A H
Sbjct: 350 RWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASH 409
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G G +AL +FSRM+ VKPN TF A+ +AC H GLVE GR++F M Y I P +E
Sbjct: 410 GHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEH 469
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
CM+DLLGRAG L EA + + +MP E + ++WG+LL + I+ ++EL E + L L+
Sbjct: 470 CACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLD 529
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
P Y ++SNIYA GRW ++ ++RK+M + +KK+PG S +EV++R H F++G S
Sbjct: 530 PQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 272/483 (56%), Gaps = 33/483 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + + + + G A IF + +V + I Q A+ L
Sbjct: 227 GLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELL 286
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+Q + + P+ ++ +L+ +E G+++H + +G ++ VV ALI MY C
Sbjct: 287 EKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMY--C 344
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
KC G L AR LF + ++V++WT ++ G
Sbjct: 345 KC-------------------------------GGLKEARKLFGDLPHRDVVTWTAMVTG 373
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ+ +EAI LFRRMQ + +KPD++ +AL++C+ ++ G+ IH + G +
Sbjct: 374 YAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLD 433
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V L +AL+ MYAK G + A VF M ++V+ WT MI G A HG REAL+ F +M++
Sbjct: 434 VYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK 493
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+KP+++TF ++LSAC HVGLVE GR++F M YGI+P +E Y C +DLLGRAG+L+
Sbjct: 494 QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLE 553
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE ++ MPF+ ++WG+LL+A I+ DVE GE A ++++KL+P + G Y LSNIYA
Sbjct: 554 EAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYA 613
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
GR+ ++ K+R+VM V K PG S+IEV +VH F D SHP+ +Y L K+
Sbjct: 614 AAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTE 673
Query: 485 QMK 487
Q+K
Sbjct: 674 QIK 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 216/452 (47%), Gaps = 51/452 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N +L + + + G A +F ++ + I+A + L A Y
Sbjct: 126 GIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCY 185
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + +PD +F +L A +++G+++H + GL+ + V +L+ MYA
Sbjct: 186 ETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYA-- 243
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
K GD++ A+ +F+ + EKNV++WT LIAG
Sbjct: 244 -------------------------------KCGDISKAQVIFDKLPEKNVVTWTLLIAG 272
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ Q + A+ L +MQ V P++I + L C A+E G+ +H YI Q G
Sbjct: 273 YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + NALI MY K G + +A ++F ++ ++ V+TWT M+ G A G EA+D+F RM++
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP+++TF + L++C ++ G+ + ++ + Y ++ ++ ++ + + G +
Sbjct: 393 QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSM 450
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC--ALQHLIKL-----EPHNSGNY 416
+A + +M E N W ++ I G + G C AL++ ++ +P
Sbjct: 451 DDARLVFNQMS-ERNVVAWTAM-----ITGCAQHGRCREALEYFEQMKKQGIKPDKVTFT 504
Query: 417 AILSNIYAILGRWNESGK-IRKVMRDMGVKKM 447
++LS + G E K R + D G+K M
Sbjct: 505 SVLSACTHV-GLVEEGRKHFRSMYLDYGIKPM 535
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 170/352 (48%), Gaps = 37/352 (10%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
K D + + LC+ A+ + N + R + F +L+ +L ++E GRE
Sbjct: 58 KVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGRE 117
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H + +G+ + ++ L+ MYA C + DAR+VFD +
Sbjct: 118 VHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR------------------- 158
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
++N++SWT +I + +Q EA + M++ KPD++ ++ L
Sbjct: 159 --------------DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLL 204
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
+A +++G+ +H I + GL + +L+ MYAK G I KA +F+ + K+V+
Sbjct: 205 NAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVV 264
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-I 336
TWT +IAG A G AL++ +M++A V PN+IT+ +IL C +E G++ I
Sbjct: 265 TWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYI 324
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
++S YG E I +I + + G L+EA KL +P + W +++
Sbjct: 325 IQSGYGRE--IWVVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMVTG 373
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 116/219 (52%), Gaps = 7/219 (3%)
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA+ + M ++ + L CA+L ++E G +H I + G+ L N L
Sbjct: 78 KEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTL 137
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+ MYAK G + A +VF+ ++++++++WT MI EA + M+ A KP++
Sbjct: 138 LSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDK 197
Query: 312 ITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+TF+++L+A + L+++G++ + I K+ +EP++ ++ + + G + +A+ +
Sbjct: 198 VTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGT--SLVGMYAKCGDISKAQVIF 255
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
++P E N W L+A G V++ AL+ L K++
Sbjct: 256 DKLP-EKNVVTWTLLIAGYAQQGQVDV---ALELLEKMQ 290
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 269/439 (61%), Gaps = 6/439 (1%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
+ S G YA +F+ +P+ + YNT I+ ++ +P +V L+N+++ + + PD ++
Sbjct: 284 AVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFT 343
Query: 79 FPFVLKAV----VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
F F+LK + L I EIH + G + V+ ALI +YA+ A +VF
Sbjct: 344 FTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVF 403
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
+E+ +V W+ +V + + G+L AR +F+ M E++V+SWT +++GYAQ + EA
Sbjct: 404 NEMVGA--DVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREA 461
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ LFR M+ V+PDE+AM+ +SAC LG +E G +H YI++ G +V L NALIDM
Sbjct: 462 LELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDM 521
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
YAK G + A QVF NM+ KS+ITW +MI+ A HG +A +F+ M + ++P+ +TF
Sbjct: 522 YAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTF 581
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+A+L+A H G V+ G F M+ YG+E +E YGCM+D+LGRAG L+EA KL+ M
Sbjct: 582 LALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMS 641
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
N +WG+LLAA IYGDVE+GE L+ LI+L+P G Y +L +IY GR E+ +
Sbjct: 642 MPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIE 701
Query: 435 IRKVMRDMGVKKMPGCSYI 453
+R+ M G KK GCS++
Sbjct: 702 LRRAMDVNGAKKTLGCSWV 720
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 198/441 (44%), Gaps = 73/441 (16%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
+ S G YA +F+ +P+ + YNT I+ ++ +P +V L+N+++ + + PD ++
Sbjct: 130 AVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFT 189
Query: 79 FPFVLKA----VVKLSTIELGREIHCQTVGTGLDSD-------------VHVVA---ALI 118
F F+LK + L I EIH G G+D D +H++ +L
Sbjct: 190 FTFLLKGRSRMRIDLPLIVASDEIH----GAGVDYDKYKTLKSYISNKVMHMLPTSQSLA 245
Query: 119 QMYASCKCIYDARKVFDELSLR--VWNVAVWNTMVAGYAKV---GDLNNARALFELMTEK 173
M +C + A K+ + R + N A+ + +A V G L+ A LF + +
Sbjct: 246 SMAEACLAM-QALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQP 304
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ----LGAVELG 229
N + TLI GY++ P++++ LF +M+ V PD L ++ L +
Sbjct: 305 NTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVAS 364
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYA-------------------------------KS 258
+ IH + + G + + NALI +YA ++
Sbjct: 365 DEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRA 424
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G++ A QVF+ M + V++WT M++G A REAL++F M V+P+E+ + ++
Sbjct: 425 GELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVI 484
Query: 319 SACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
SAC +G +E G RY + G + +ID+ + G + A ++ M
Sbjct: 485 SACTSLGDLETGFEVHRYID----ENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME- 539
Query: 376 EANAAIWGSLLAASNIYGDVE 396
+ W S+++A +G+ E
Sbjct: 540 RKSLITWNSMISACANHGNAE 560
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/465 (39%), Positives = 282/465 (60%), Gaps = 15/465 (3%)
Query: 32 IFTH--KSKPDVYLYNTTIKALCQTDNPLNAVILYNKI----QASALRPDNYSFPFVLKA 85
+F H P + L+N I+ + N + L+ ++ + PD Y+F FV+ +
Sbjct: 128 LFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITS 187
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
++ G +H V +G +S+++V ++I M + + DARKVF+++S R +V
Sbjct: 188 CSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSER--DVF 245
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
W +++ GYAK G+++ A LF +M +N +SW +I+G+ + EA+T F M ++
Sbjct: 246 SWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDD 305
Query: 206 -VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
V P+E ++ LSACA LGA++ G WIH YI++ G+ ++ ALIDMYAK G+I A
Sbjct: 306 RVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCA 365
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+VF + + V+++T+MI+GL+ HGLG++AL +F +M V PNEIT + +L+ C H
Sbjct: 366 SRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHS 425
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLVE G M+S +GI PKIE YGC IDLLGRAGYL+ A ++++ MP E + IW +
Sbjct: 426 GLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRA 485
Query: 385 LLAASNIYGDVELGECALQHL--IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
LL+AS I+ +V LGE + H+ +K HN G +LSN+YA LGRW ++RK+M D
Sbjct: 486 LLSASRIHHNVNLGEQIISHIGQLKSSDHNGGE-VLLSNLYASLGRWERVTEMRKLMVDR 544
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ PGCS+IEV+ VHEF D HP ++ +I K+N +K
Sbjct: 545 RSESSPGCSWIEVNGLVHEFRVADQLHP---QIVEIRNKLNEILK 586
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 188/460 (40%), Gaps = 93/460 (20%)
Query: 22 SLGFSDYAYSIFTHKS---KPDVYLYNTTIK----------------ALCQTDNPLNAVI 62
+LG + ++ FT S KP +++ + I + C ++ + I
Sbjct: 3 TLGTKKHKFTAFTFSSTLTKPQIHVISKAITLNPIAVSKHFKFITYFSFCSSNTFPSISI 62
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
N I P+ +F +L KLS ++ +IH Q V L S+ + A+LI Y
Sbjct: 63 PTNPIPIDL--PNPQTFSLLLNQRPKLSPLQ---QIHAQVVTQALSSNASLTASLIHCYL 117
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
K +AR +FD + +WN M+ Y+K+ + LF M
Sbjct: 118 CAKNHPNARILFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRM------------ 165
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+TL MQ V PDE +++C+ ++ GE +H + + G
Sbjct: 166 ------------LTLDGPMQ---VVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFE 210
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + + N++I+M + ++ A +VF M + V +WT+++ G A HG A ++F+ M
Sbjct: 211 SNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMM 270
Query: 303 E--------------------------------RARVKPNEITFIAILSACCHVGLVELG 330
RV PNE + +LSAC H+G ++ G
Sbjct: 271 PVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQG 330
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ ++ + GI +ID+ + G + A ++ + + + + S+++ +
Sbjct: 331 -NWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGI-CKRDVLSFTSMISGLS 388
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
+G LG+ AL+ ++ N ++ N ILG N
Sbjct: 389 YHG---LGKDALRVFYQMLDEN-----VMPNEITILGVLN 420
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 251/447 (56%), Gaps = 34/447 (7%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
GF + +F D+ + T I+A + P A+ + ++ +A D + VL
Sbjct: 187 GFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---DRMTLVVVL 243
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L LG++I Y +FD S +
Sbjct: 244 SACSQLGDFTLGKKI---------------------------LAYMDHHLFDVHS----D 272
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V + N ++ Y K G + AR LF LM KN++SW ++I+G A EA+ +FRRMQ
Sbjct: 273 VFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQT 332
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+KPD + ++ L++CA LG +ELG+W+H+YI++ + + NAL+DMYAK G I +
Sbjct: 333 MGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQ 392
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF+ MK K V ++T MI G A+HG AL +FS M R V+P+ +T + +LSAC H
Sbjct: 393 AFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSH 452
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL+E GRR+F M Y ++P+ E YGCM+DLLGRAG + EAE +MP +A++WG
Sbjct: 453 AGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWG 512
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
SLL A I+ VELGE +Q LI++EP G Y ++SNIY+ RW ++ K RK M+
Sbjct: 513 SLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNN 572
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+KK PGCS IEV VHEF G+ SHP
Sbjct: 573 IKKTPGCSSIEVDGMVHEFRKGEKSHP 599
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 194/377 (51%), Gaps = 51/377 (13%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I L Q+ HL DS +L ++ + + F H++ VY++N I++L ++N +
Sbjct: 70 ITSLLQQDVHL----ADSIQNLWYAS-SLANFCHQNP--VYIFNAIIQSLSTSNNTFTHI 122
Query: 62 I-LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
LY ++ L PD Y+ P++LKA + +IH ++ TGL S
Sbjct: 123 FSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSS----------- 171
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
N+ V NT++ YA G + +F+ ++ISWTT
Sbjct: 172 ----------------------NLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTT 209
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-- 238
LI Y++M P+EAI F RM N D + ++ LSAC+QLG LG+ I Y++
Sbjct: 210 LIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHL 266
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ +++ V L NAL+DMY K G+ A Q+F M K++++W +MI+GLA GL +EAL M
Sbjct: 267 FDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHM 326
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDL 356
F RM+ +KP+ +T + +L++C ++G +ELG+ + + + K + Y ++D+
Sbjct: 327 FRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHM---KADGYVANALVDM 383
Query: 357 LGRAGYLQEAEKLLRRM 373
+ G + +A + + M
Sbjct: 384 YAKCGSIDQAFMVFQAM 400
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 298/554 (53%), Gaps = 68/554 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDS-CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+IV GL Q R + + CS +A S+F +PD ++ NT ++ ++P
Sbjct: 82 LIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYT 141
Query: 60 AV-ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ Y ++ + P++Y+FP ++K ++ +I G +IH + + G + D+ V +LI
Sbjct: 142 ALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLI 201
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY+ C I DAR +F+ S+ ++ WN+M+ GY K G++ AR LFE M E+++ SW
Sbjct: 202 HMYSVCGRIGDARAMFEVCSIS--DLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSW 259
Query: 179 TTLIA-------------------------------GYAQMDQPNEAITLFRRMQVENV- 206
++IA GYAQ+ A LF M NV
Sbjct: 260 NSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVV 319
Query: 207 -----------------------------KPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
P+E +++ L+ACA LG ++ G+WIH+YI+
Sbjct: 320 SWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIK 379
Query: 238 QYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ V L+ AL+ MYAK G + A VF+ M N+SV++W +MI G +HG +AL
Sbjct: 380 NNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKAL 439
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+MF ME+ PN+ TFI +LSAC H G++ G YF++M+ Y IEPK+E YGCM+DL
Sbjct: 440 EMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDL 499
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG +++ E+L+R+MP E A+WG+LL+A + + EL E + LI+LEP + G Y
Sbjct: 500 LGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPY 559
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK-RVHEFVAGDTSHPDFDRL 475
+LSNIYA G+W++ +RK+M++ G+ K G S++ + + FV + H +
Sbjct: 560 LLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGTQSFVEKASVHRK-SMM 618
Query: 476 YQILCKINGQMKFA 489
Y IL + QMK +
Sbjct: 619 YSILSDMATQMKLS 632
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 272/481 (56%), Gaps = 36/481 (7%)
Query: 9 NNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
+NHL+ + ++ + G D A +F D+ + I Q + P +A++L+ +
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ L+P++++ +LKA ++ G ++H + G S V+V +AL+ MYA C
Sbjct: 180 MLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC-- 237
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
G ++ A+ F+ M K+ +SW LI+G+A
Sbjct: 238 -------------------------------GHMDAAQLAFDGMPTKSEVSWNALISGHA 266
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ + A+ L +MQ +N +P + SACA +GA+E G+W+H ++ + GL I
Sbjct: 267 RKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAF 326
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N L+DMYAK+G I A +VF+ + V++W TM+ G A HGLG+E LD F +M R
Sbjct: 327 IGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG 386
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
++PNEI+F+ +L+AC H GL++ G YF +MK +Y +EP + Y +DLLGR G L A
Sbjct: 387 IEPNEISFLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRA 445
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
E+ +R MP E AA+WG+LL A ++ ++ELG A + +L+PH+SG +LSNIYA
Sbjct: 446 ERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASA 505
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW + K+RK+M++ GVKK P CS++E+ VH FVA D +HP + +I+G++
Sbjct: 506 GRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKI 565
Query: 487 K 487
K
Sbjct: 566 K 566
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 164/329 (49%), Gaps = 38/329 (11%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCK 125
IQ +L PD + +LK +L +E GR +H V + LD+ + + ++ MYA C
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
C+ DAR++FDE+ + ++ W ++A G+
Sbjct: 138 CLDDARRMFDEMPTK--DMVTWTALIA-------------------------------GF 164
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
+Q ++P +A+ LF +M ++P+ + + L A ++ G +H + +YG + V
Sbjct: 165 SQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV 224
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+ +AL+DMYA+ G + A F+ M KS ++W +I+G A G G AL + +M+R
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 306 RVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+P T+ ++ SAC +G +E G+ + +++KS G++ ++D+ +AG +
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKS--GLKLIAFIGNTLLDMYAKAGSID 342
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+A+++ R+ + + W ++L +G
Sbjct: 343 DAKRVFDRL-VKPDVVSWNTMLTGCAQHG 370
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 6/213 (2%)
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSG 259
+Q ++ PD L C +LG VE G +H + ++ + L+ + L N +++MYAK G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A ++F+ M K ++TWT +IAG + + R+AL +F +M R ++PN T ++L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
A ++ G + + +YG + + ++D+ R G++ A+ MP ++
Sbjct: 198 ASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
+ W +L++ G+ GE AL L K++ N
Sbjct: 257 S-WNALISGHARKGE---GEHALHLLWKMQRKN 285
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 34/286 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++ S +D + G D A F +N I + +A+ L
Sbjct: 219 GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLL 278
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+Q +P ++++ V A + +E G+ +H + +GL + L+ MYA
Sbjct: 279 WKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA 338
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I DA++VFD L +V WNTM+ G A+ G G
Sbjct: 339 GSIDDAKRVFDRLVKP--DVVSWNTMLTGCAQHG------------------------LG 372
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+D+ F +M ++P+EI+ L L+AC+ G ++ G + +++Y +
Sbjct: 373 KETLDR-------FEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPD 425
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
VP +D+ + G + +A + M + W ++ +H
Sbjct: 426 VPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 266/430 (61%), Gaps = 6/430 (1%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV- 86
YA +F+ +P+ + YNT I+ ++ +P +V L+N+++ + + PD ++F F+LK
Sbjct: 234 YADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRS 293
Query: 87 ---VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ L I EIH + G + V+ ALI +YA+ A +VF+E+ +
Sbjct: 294 RMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGA--D 351
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W+ +V + + G+L AR +F M E++V+SWT +++GYAQ + EA+ LFR M+
Sbjct: 352 VVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRD 411
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V+PDE+AM++ +SAC LG +E G +H YI++ G +V L NALIDMYAK G +
Sbjct: 412 VGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDL 471
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A QVF NM+ KS+ITW +MI+ A HG +A +F+ M + ++P+ +TF+A+L+A H
Sbjct: 472 AWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTH 531
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G V+ G F M+ YG+E +E YGCM+D+LGRAG L+EA KL+ M N +WG
Sbjct: 532 KGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWG 591
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LLAA IYGDVE+GE L+ LI+L+P G Y +L +IY GR E+ ++R+ M G
Sbjct: 592 ALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNG 651
Query: 444 VKKMPGCSYI 453
KK GCS++
Sbjct: 652 AKKTLGCSWV 661
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 127/310 (40%), Gaps = 53/310 (17%)
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM---------------------- 213
+SWT +++ YAQ + E + LFR ++ V+P ++
Sbjct: 119 VSWTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKYKTLKSYISNKVMHM 178
Query: 214 ------LAALS-ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--GKIGKA 264
LA+++ AC + A++L IH + L+ + + A S G + A
Sbjct: 179 LPTSQSLASMAEACLTMQALKL---IHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYA 235
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F + + + T+I G + +++ +F++M R V P+ TF +L +
Sbjct: 236 DRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRM 295
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYG---------CMIDLLGRAGYLQEAEKLLRRMPF 375
R ++ + I + + G +I L G A ++ M
Sbjct: 296 ------RIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEM-V 348
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
A+ W L+ A G++EL A Q ++ + ++ ++ + YA R E+ ++
Sbjct: 349 GADVVSWSGLVVAHVRAGELEL---ARQVFYEMPERDVVSWTVMVSGYAQAKRSREALEL 405
Query: 436 RKVMRDMGVK 445
+ MRD+GV+
Sbjct: 406 FREMRDVGVR 415
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 275/451 (60%), Gaps = 5/451 (1%)
Query: 32 IFTHKSKPDVYLYNTTIKALC-QTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
+ H SKP ++LYN I+A + LY++I+ P+ ++F F+ A LS
Sbjct: 2 VLHHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSLS 61
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
+ LG+ +H + +G + D+ AL+ MYA + ARK+FDE+ +R V WN M
Sbjct: 62 SSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVR--GVPRWNAM 119
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPD 209
+AG A+ GD++ A LF M +NV+ WTT+I+GY+ Q ++A+ LF M+ E + P+
Sbjct: 120 MAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPN 179
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ +++ L ACA L A+E+G+ + Y + G +NA+++MY K GKI A +VF
Sbjct: 180 AVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFN 239
Query: 270 NMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ + +++ +W +M+ GLA+HG +AL+++ +M P+++TF+ +L AC G+V+
Sbjct: 240 EIGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVK 299
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR F + + I PK+E YGCM+DLLGRAG L+EA ++++ M + ++ IWG+LL A
Sbjct: 300 KGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGA 359
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
+ +G+VEL E A + L LEP N GNY ILSNIYA G+W+ K+RKVM+ + K
Sbjct: 360 CSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSA 419
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
G S+IE ++H+F+ D SHP + ++ +L
Sbjct: 420 GHSFIEEGAQLHKFIVKDRSHPKSNEIFALL 450
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/469 (37%), Positives = 269/469 (57%), Gaps = 10/469 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA ++F+ S PD +L ++ T PL L+++++ A D PF +
Sbjct: 106 YAVAVFSSLSPPDPFLAAALLRFAHLTQPPLETFRLFSRLRC-AHGSDLPFLPFAFSPLA 164
Query: 88 KLSTIELGREIHCQTVGT-----GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
K + G D V +LI Y +C + ARKVFDE+ ++
Sbjct: 165 KSAAAARSLHAAASAHAVSLLLGGFDKHRFVENSLISAYVACGDVGAARKVFDEMLVK-- 222
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V W ++V Y+++ D+ +A +F L K++++WT ++ GYAQ P +A+ F +M
Sbjct: 223 DVISWTSIVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMA 282
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
V + DE+++ A+SACAQLGAV+ W+ E+ GL V + + L+DMYAK G I
Sbjct: 283 VAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRNVVVGSGLVDMYAKCGLID 342
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSAC 321
+A +VFE M +K+V T+++MI GLA HG + + +F+ M RA V+PN +TFI +L+AC
Sbjct: 343 EARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPNHVTFIGVLTAC 402
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H G+V+ GR YF MK RYGI P + Y CM+DLL R+G + EA L++ M E + +
Sbjct: 403 SHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLVTEALDLVKSMTVEPHGGV 462
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
WG+LL A I+G+ E+ + A +HL +LEP GNY +LSN A G W+E K+RK+MR
Sbjct: 463 WGALLGACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTLASAGEWDEVSKLRKLMRI 522
Query: 442 MGVKKMPGCSYIEVSKR-VHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
G+KK P S+ E VH+F AGD +HP + + L ++ ++ A
Sbjct: 523 RGLKKDPAVSWFEGRDGFVHQFFAGDNTHPSMHEIKKRLLELREKLNLA 571
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 8/211 (3%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL +N + S +D + G D A +F +VY Y++ I L + + L+
Sbjct: 320 GLGRNVVVGSGLVDMYAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALF 379
Query: 65 NK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYA 122
N ++ + + P++ +F VL A ++ GR Q G+ A ++ + A
Sbjct: 380 NDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDLLA 439
Query: 123 SCKCIYDARKVFDELSLR----VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+ +A + +++ VW + + G +V + A LF L E + ++
Sbjct: 440 RSGLVTEALDLVKSMTVEPHGGVWGALLGACRIHGNTEVAKI-AAEHLFRLEPE-GIGNY 497
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
L A + +E L + M++ +K D
Sbjct: 498 VLLSNTLASAGEWDEVSKLRKLMRIRGLKKD 528
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 269/462 (58%), Gaps = 10/462 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALC--QTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
YA IF H + +L+ I A +P + + +++ RP+++ FP LK
Sbjct: 57 YARLIFDHIPSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKT 116
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC-IYDARKVFDELSLRVWNV 144
+ E +H Q V +G V AL+ Y+ + +A+KVFDE+S R +V
Sbjct: 117 CPESCAAE---SLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDR--SV 171
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+ MV+G+A+VGD+ +A +F M +++V SW LIAG Q + I LFRRM E
Sbjct: 172 VSFTAMVSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFE 231
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+P+ + ++ ALSAC +G ++LG WIH Y+ + GL + NAL+DMY K G +GKA
Sbjct: 232 CNRPNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKA 291
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR--VKPNEITFIAILSACC 322
+VFE K + +W +MI ALHG A+ +F +M V+P+E+TF+ +L+AC
Sbjct: 292 RKVFEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACT 351
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVE G YF +M YGIEP+IE YGC+IDLLGRAG EA +++ M E + +W
Sbjct: 352 HGGLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVW 411
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
GSLL ++G +L E A + LI+++PHN G +L+N+Y LG+W+E + + ++
Sbjct: 412 GSLLNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQ 471
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
K+PGCS+IEV +VH+F + D S+P + LY +L + G
Sbjct: 472 KSYKVPGCSWIEVDDQVHQFYSLDKSNPKTEDLYIVLESLVG 513
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 35/300 (11%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
+ + + +G + A +F DV +N I Q + L+ ++
Sbjct: 174 FTAMVSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECN 233
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
RP+ + L A + ++LGR IH GL D V+ AL+ MY C + ARK
Sbjct: 234 RPNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARK 293
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF+ + + WN+M+ +A G ++A A+FE M E
Sbjct: 294 VFEMNPEK--GLTSWNSMINCFALHGQSDSAIAIFEQMVEGG------------------ 333
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-IHNYIEQYGLNTIVPLNNAL 251
V+PDE+ + L+AC G VE G W +++YG+ + L
Sbjct: 334 -----------GGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEPQIEHYGCL 382
Query: 252 IDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
ID+ ++G+ +A+ V + M + W +++ G +H GR L F+ + + P+
Sbjct: 383 IDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVH--GRTDLAEFAAKKLIEIDPH 440
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 267/434 (61%), Gaps = 6/434 (1%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G YA +F+ +P+ + YNT I+ ++ +P +V L+N+++ + + PD ++F F+L
Sbjct: 43 GCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLL 102
Query: 84 KAV----VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
K + L I EIH + G + V+ ALI +YA+ A +VF+E+
Sbjct: 103 KGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVG 162
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+V W+ +V + + G+L AR +F M E++V+SWT +++GYAQ + EA+ LFR
Sbjct: 163 A--DVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFR 220
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M+ V+PDE+AM++ +SAC LG +E G +H YI++ G +V L NALIDMYAK G
Sbjct: 221 EMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCG 280
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A QVF NM+ KS+ITW +MI+ A HG +A +F+ M + ++P+ +TF+A+L+
Sbjct: 281 CMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLT 340
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
A H G V+ G F M+ YG+E +E YGCM+D+LGRAG L+EA KL+ M N
Sbjct: 341 AYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCND 400
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+WG+LLAA IYGDVE+GE L+ LI+L+P G Y +L +IY GR E+ ++R+ M
Sbjct: 401 VVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAM 460
Query: 440 RDMGVKKMPGCSYI 453
G KK GCS++
Sbjct: 461 DVNGAKKTLGCSWV 474
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 2 IVRGLDQNNHLLS-RFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPL 58
I+R NH +S +F+ + D YS +F+ KP YN I+A + +P
Sbjct: 91 IIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYSMSHSPE 150
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
LY +++ + P+ S FV+K+ +++S++ G +IH + + G SD ++ L+
Sbjct: 151 QGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLM 210
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y+ C +A KVFDE + W+T +SW
Sbjct: 211 DLYSCCDKFEEACKVFDE-------IPQWDT--------------------------VSW 237
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQ--VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
LI+ + +A+ +F MQ + +PD++ L L ACA LGA+E GE +HNYI
Sbjct: 238 NVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYI 297
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
E++G + + L N+LI MY++ G++ KA +F+ M ++V++W+ MI+G A+HG GREA+
Sbjct: 298 EEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAI 357
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+ F +M++ V P++ T +LSAC H GLV+ G +F+ M +GIEP I YGCM+DL
Sbjct: 358 EAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDL 417
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRAG L +A +L+ M + ++ +W +LL A I+ LGE + HLI+L+ +G+Y
Sbjct: 418 LGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDY 477
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+L NIY+ +G W++ +RK M++ G++ PGCS IE+ +VHEFV D HP D +Y
Sbjct: 478 VLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIY 537
Query: 477 QILCKINGQMKFA 489
++L +I Q+K A
Sbjct: 538 EMLDEIGKQLKIA 550
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/472 (37%), Positives = 268/472 (56%), Gaps = 16/472 (3%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA ++F+ S PD +L ++ T PL +++ ++ R PF+ A
Sbjct: 95 YAVAVFSSLSPPDPFLAAALLRFAHLTQPPLETFRVFSGLR----RAHGRDLPFLPFAFS 150
Query: 88 KLSTIELGREIHCQTVGT--------GLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
L+ G G D V +LI Y +C + ARKV DE+ +
Sbjct: 151 PLAKSAAAARSLPAAAGAHAVSLLLGGFDKHRFVENSLIGAYVACGDVGAARKVLDEMVV 210
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ +V W ++VA Y++ D+ +A +F L K++++WT ++ GYAQ P +A+ F
Sbjct: 211 K--DVISWTSIVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFE 268
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+M + DE+++ A+SACAQLGAV WI ++ GL V + + L+DMYAK G
Sbjct: 269 QMAGAGMPIDEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCG 328
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAIL 318
I +A +VFE M+ K+V T+++MI GLA HG +A+ +F+ M RA V+PN +TFI +L
Sbjct: 329 LIDEACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVL 388
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+AC H G+V+ GR YF MK RYGI P + Y CM+DLLGRAG + EA L++ M E +
Sbjct: 389 TACSHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPH 448
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+WG+LL A I+G+ ++ + A QHL KLEP GNY +LSN A G W+E K+RK+
Sbjct: 449 GGVWGALLGACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKL 508
Query: 439 MRDMGVKKMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
MR G+KK P S E VH+F AGD +HP + + L ++ ++K A
Sbjct: 509 MRIRGLKKDPAVSSFEGRDGLVHQFFAGDNTHPWMHEIKKTLLELRARLKLA 560
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL +N + S +D + G D A +F + +VY Y++ I L +A+ L+
Sbjct: 309 GLGRNVVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIALF 368
Query: 65 NK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYA 122
N ++ + + P++ +F VL A ++ GR Q G+ ++ +
Sbjct: 369 NDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVDLLG 428
Query: 123 SCKCIYDARKVFDELSLR----VWNVAVWNTMVAGYAKVGDLNNARALFELMTE--KNVI 176
+ +A + +++ VW + + G KV + A+ LF+L E N +
Sbjct: 429 RAGLVIEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAKV-AAQHLFKLEPEGIGNYV 487
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+ +A + D+ ++ L M++ +K D
Sbjct: 488 LLSNTLASAGEWDEVSKVRKL---MRIRGLKKD 517
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 248/424 (58%), Gaps = 34/424 (8%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F D +N I Q+ A+ + +++ + + P+ + VL
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + ++ELG + GL S++ +V ALI MY+
Sbjct: 272 SACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYS--------------------- 310
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
K GDL+ AR LFE + EK++ISW +I GY+ M+ EA+ LFR+MQ
Sbjct: 311 ------------KCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ 358
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIG 262
NV+P+++ ++ L ACA LGA++LG+WIH YI++ L T L +LIDMYAK G I
Sbjct: 359 SNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIE 418
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A QVF MK KS+ +W MI+GLA+HG AL++F +M +P++ITF+ +LSAC
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVELGR+ F+ M Y I PK++ YGCMIDLLGRAG EAE L++ M + + AIW
Sbjct: 479 HAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIW 538
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
GSLL A ++G+VELGE A +HL +LEP N G Y +LSNIYA GRW++ +IR + D
Sbjct: 539 GSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDK 598
Query: 443 GVKK 446
G+KK
Sbjct: 599 GMKK 602
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 232/399 (58%), Gaps = 5/399 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL LS+ I+ C S G YA +F +P+ +++NT I+ + +P+
Sbjct: 55 IIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPV 114
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ Y ++ + P++Y+FPF+LK+ K+ + G++IH + GL+SD V +LI
Sbjct: 115 GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLI 174
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA + A VF + SLR + + ++ GY G L++AR LFE + ++ +SW
Sbjct: 175 NMYAQNGELGYAELVFSKSSLR--DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSW 232
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+IAGYAQ + EA+ F+ M+ NV P+E M+ LSACAQ G++ELG W+ ++IE
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED 292
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+GL + + L NALIDMY+K G + KA +FE + K +I+W MI G + +EAL +
Sbjct: 293 HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALAL 352
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M+++ V+PN++TF++IL AC ++G ++LG+ + ++ + +ID+
Sbjct: 353 FRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYA 412
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
+ G ++ A+++ M ++ + W ++++ ++G +
Sbjct: 413 KCGNIEAAKQVFAGMKPKSLGS-WNAMISGLAMHGHANM 450
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 63/307 (20%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
++IH Q + TGL + ++ LI+ A +
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCA-------------------------------IS 77
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
G+L+ A LFE + + N W T+I G + P AI + RM + V+P+
Sbjct: 78 PFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPF 137
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG------------- 262
L +CA++GA + G+ IH ++ + GL + ++ +LI+MYA++G++G
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197
Query: 263 ------------------KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
A ++FE + + ++W MIAG A G EAL F M+R
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR 257
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
A V PNE T + +LSAC G +ELG + ++ +G+ + +ID+ + G L
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLD 316
Query: 365 EAEKLLR 371
+A L
Sbjct: 317 KARDLFE 323
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N L + ID + G + A +F + +N I L + A+ L+ +++
Sbjct: 400 NTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMR 459
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
PD+ +F VL A +ELGR+ V + + ++ +Q Y +
Sbjct: 460 DEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV------EDYDISPKLQHYGCMIDLL 513
Query: 129 DARKVFDELSLRVWNV------AVWNTM-----VAGYAKVGDLNNARALFELMTE 172
+FDE + N+ A+W ++ V G ++G+ A+ LFEL E
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEF-AAKHLFELEPE 567
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 272/481 (56%), Gaps = 36/481 (7%)
Query: 9 NNHLLSR--FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
+NHL+ + ++ + G D A +F D+ + I Q + P +A++L+ +
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ +P++++ +LKA ++ G ++H + G S V+V +AL+ MYA C
Sbjct: 180 MLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC-- 237
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
G ++ A+ F+ M K+ +SW LI+G+A
Sbjct: 238 -------------------------------GHMDAAQLAFDGMPTKSEVSWNALISGHA 266
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ + A+ L +MQ +N +P + LSACA +GA+E G+W+H ++ + GL I
Sbjct: 267 RKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAF 326
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N L+DMYAK+G I A +VF+ + V++W TM+ G A HGLG+E LD F +M R
Sbjct: 327 IGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG 386
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
++PNEI+F+ +L+AC H GL++ G YF +MK +Y +EP + Y +DLLGR G L A
Sbjct: 387 IEPNEISFLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRA 445
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
E+ +R MP E AA+WG+LL A ++ ++ELG A + +L+PH+SG +LSNIYA
Sbjct: 446 ERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASA 505
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW + K+RK+M++ GVKK P CS++E+ VH FVA D +HP + +I+G++
Sbjct: 506 GRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKI 565
Query: 487 K 487
K
Sbjct: 566 K 566
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 164/329 (49%), Gaps = 38/329 (11%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCK 125
IQ +L PD + +LK +L +E GR +H V + LD+ + + ++ MYA C
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
C+ DAR++FDE+ + ++ W ++A G+
Sbjct: 138 CLDDARRMFDEMPTK--DMVTWTALIA-------------------------------GF 164
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
+Q ++P +A+ LF +M +P+ + + L A ++ G +H + +YG + V
Sbjct: 165 SQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV 224
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+ +AL+DMYA+ G + A F+ M KS ++W +I+G A G G AL + +M+R
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 306 RVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+P T+ ++LSAC +G +E G+ + +++KS G++ ++D+ +AG +
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKS--GLKLIAFIGNTLLDMYAKAGSID 342
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+A+++ R+ + + W ++L +G
Sbjct: 343 DAKRVFDRL-VKPDVVSWNTMLTGCAQHG 370
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 6/213 (2%)
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSG 259
+Q ++ PD L C +LG VE G +H + ++ + L+ + L N +++MYAK G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A ++F+ M K ++TWT +IAG + + R+AL +F +M R +PN T ++L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
A ++ G + + +YG + + ++D+ R G++ A+ MP ++
Sbjct: 198 ASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
+ W +L++ G+ GE AL L K++ N
Sbjct: 257 S-WNALISGHARKGE---GEHALHLLWKMQRKN 285
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 283/493 (57%), Gaps = 39/493 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G DQ+ L ++ I+ LG D A +F + +Y++N +AL
Sbjct: 104 LVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKEL 163
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVV----KLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ LY ++ + D +++ FVLKA V +S ++ G+EIH + G ++++HV+
Sbjct: 164 LDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTT 223
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ +Y AK G ++ A ++F M KN +
Sbjct: 224 LLDVY---------------------------------AKFGSVSYANSVFCAMPTKNFV 250
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVE--NVKPDEIAMLAALSACAQLGAVELGEWIHN 234
SW+ +IA +A+ + P +A+ LF+ M +E + P+ + M+ L ACA L A+E G+ IH
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHG 310
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
YI + GL++I+P+ NALI MY + G+I +VF+NMKN+ V++W ++I+ +HG G++
Sbjct: 311 YILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKK 370
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ +F M P+ I+FI +L AC H GLVE G+ F M S+Y I P +E Y CM+
Sbjct: 371 AIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 430
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRA L EA KL+ M FE +WGSLL + I+ +VEL E A L +LEP N+G
Sbjct: 431 DLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAG 490
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
NY +L++IYA W+E+ + K++ G++K+PGCS+IEV ++V+ FV+ D +P +
Sbjct: 491 NYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEE 550
Query: 475 LYQILCKINGQMK 487
++ +L K++ +MK
Sbjct: 551 IHALLVKLSNEMK 563
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P + + +CAQ ++ G +H + G + L LI+MY + G I +A +V
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC----H 323
F+ + +++ W + LA+ G G+E LD++ +M + + T+ +L AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 324 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
V ++ G+ + +I+ R+G E I ++D+ + G + A + MP + N W
Sbjct: 196 VSPLQKGKEIHAHIL--RHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSW 252
Query: 383 GSLLAASNIYGDVELGECALQ--HLIKLEPHNS 413
+++A + E+ AL+ L+ LE H+S
Sbjct: 253 SAMIAC---FAKNEMPMKALELFQLMMLEAHDS 282
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 281/460 (61%), Gaps = 4/460 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL QN+ L ++ I + + ++ +F +V+L+N+ I + A L+
Sbjct: 53 GLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLF 112
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N++ +S + PD+++ + K +L + G+ IH +++ G SD V +++ MY C
Sbjct: 113 NQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKC 172
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
++RKVFDE+++R N WN ++AGYA G+L R +F+ M +NV SWT +I G
Sbjct: 173 GNFEESRKVFDEMTIR--NSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMING 230
Query: 185 YAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
Y + +EA++LFR MQV + ++P+ +++++ L AC+ + G IH + + LN
Sbjct: 231 YVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNN 290
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRM 302
V L NALIDMY+K G + A +VFE+ K I+W++MI+G LHG G+EA+ ++ +M
Sbjct: 291 EVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKM 350
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+A ++P+ IT + ILSAC GLV G ++ + + YGIEP +E + C++D+LGRAG
Sbjct: 351 LQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQ 410
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L A ++ MP E ++WG+L++ S I+GD+E+ E A + LI+LEP N NY +SN+
Sbjct: 411 LDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNL 470
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEF 462
YA RW+ ++R++M+D ++K+PGCS+I ++ + H F
Sbjct: 471 YASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCF 510
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 155/370 (41%), Gaps = 67/370 (18%)
Query: 57 PLNAVILYNKIQASALRPD-NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
P ++ ++ ASA D + + L V +++L R+ H + + GL + +
Sbjct: 3 PKTCTLIPSRYYASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLAT 62
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
LI YA C+ Y +R VFD L + NV +WN+++ GYAK L+
Sbjct: 63 KLIFAYAICQHPYHSRLVFDSLQHK--NVFLWNSLINGYAK-------NRLY-------- 105
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
NEA LF +M +V PD+ + ++LGA+ G+ IH
Sbjct: 106 ----------------NEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK 149
Query: 236 IEQYGLNTIVPLNNALIDMYAK-------------------------------SGKIGKA 264
+ G + + N+++ MY K SG +
Sbjct: 150 SIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVG 209
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCH 323
+VF+ MK ++V +WT MI G +G EAL +F M+ ++PN ++ +++L AC
Sbjct: 210 RRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSS 269
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+ GR+ R + ++ +ID+ + G L A ++ +A W
Sbjct: 270 FSGLLSGRQIHG-FAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWS 328
Query: 384 SLLAASNIYG 393
S+++ ++G
Sbjct: 329 SMISGYGLHG 338
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 269/481 (55%), Gaps = 9/481 (1%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S +D S A F ++ +N+ I Q A+ ++ ++ +
Sbjct: 190 SALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIE 249
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVG-TGLDSDVHVVAALIQMYASCKCIYDARK 132
PD + V A LS I G +IH + + +D+ + AL+ MYA C+ + +AR
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD + LR +V +MV+GYAK + AR +F M E+NV+SW LIAGY Q +
Sbjct: 310 VFDRMPLR--DVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENE 367
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVP 246
EA+ LF ++ E++ P L+ACA L ++LG H +I ++G ++ +
Sbjct: 368 EAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIF 427
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G + VFE M + ++W MI G A +G G EAL++F M +
Sbjct: 428 VGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSG 487
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+P+ +T I +LSAC H GLVE GR YF M +G+ P + Y CM+DLLGRAG L EA
Sbjct: 488 ERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEA 547
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
L++ MP E +A +WGSLLAA ++G++ LG+ + L++++P NSG Y +LSN+YA L
Sbjct: 548 NNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAEL 607
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW + ++RK MR MGV K PGCS+I + +H F+ D HP +Y IL + QM
Sbjct: 608 GRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQM 667
Query: 487 K 487
K
Sbjct: 668 K 668
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D+ F +L VK ++ R +H + + T S++ + L+ +Y C + DARKVF
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
D + R N WN ++ K G L+ A LF+ M E++ SW +++G+AQ D+ EA
Sbjct: 78 DHMQQR--NTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEA 135
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ M E+ +E + +ALSACA L + +G IH I + + V + +AL+DM
Sbjct: 136 LRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDM 195
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
Y+K + A + F++M +++++W ++I +G +AL++F RM ++P+EIT
Sbjct: 196 YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITL 255
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
++ SAC + + G + + + ++D+ + + EA + RMP
Sbjct: 256 ASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Query: 375 F 375
Sbjct: 316 L 316
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 189/451 (41%), Gaps = 106/451 (23%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKAL---------------------- 51
+R +D GF + A +F H + + + +N + AL
Sbjct: 58 NRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQC 117
Query: 52 ---------CQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQT 102
Q D A+ + + + YSF L A L + +G +IH
Sbjct: 118 SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLI 177
Query: 103 VGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+ DV++ +AL+ MY+ C+ + A++ FD++ +R N+ WN
Sbjct: 178 AKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVR--NIVSWN-------------- 221
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
+LI Y Q +A+ +F RM ++PDEI + + SACA
Sbjct: 222 -----------------SLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACAS 264
Query: 223 LGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGKIGKALQVFE----------- 269
L A+ G IH + ++ N +V L NAL+DMYAK ++ +A VF+
Sbjct: 265 LSAIREGLQIHARVMKHDKYRNDLV-LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSET 323
Query: 270 --------------------NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
NM ++V++W +IAG +G EA+ +F ++R + P
Sbjct: 324 SMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 310 NEITFIAILSACCHVGLVELGRR-YFNIMKSRY----GIEPKIEQYGCMIDLLGRAGYLQ 364
TF +L+AC ++ ++LGR+ + +I+K + G + I +ID+ + G ++
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVE 443
Query: 365 EAEKLLRRMPFEANAAIWGSLLA--ASNIYG 393
+ + RM E + W +++ A N YG
Sbjct: 444 DGRLVFERM-LERDNVSWNAMIVGYAQNGYG 473
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/481 (36%), Positives = 272/481 (56%), Gaps = 35/481 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I RGLD++ H+ I + G A +F S+ D+ +N+ I + + A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ ++ + +P+ S VL A +L ++LG + V + + + +ALI M
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C GDL +AR +F+ M +K+ ++W
Sbjct: 273 YGKC---------------------------------GDLVSARRIFDSMKKKDKVTWNA 299
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GYAQ EAI LF+ M++ + PD+I ++ LSACA +GA++LG+ + Y + G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
V + AL+DMYAK G + A +VF M NK+ ++W MI+ LA HG +EAL +F
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFK 419
Query: 301 RM--ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
M E V PN+ITF+ +LSAC H GLV+ GRR F++M S +G+ PKIE Y CM+DL
Sbjct: 420 SMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG+L+EA + MP + + I G+LL A ++++ E ++ L++LEP NSGNY I
Sbjct: 480 RAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVI 539
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
S +YA L RW++S ++R +M+ GV K PGCS+I+++ ++HEF AGD H ++ ++QI
Sbjct: 540 SSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQI 599
Query: 479 L 479
L
Sbjct: 600 L 600
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 195/373 (52%), Gaps = 38/373 (10%)
Query: 27 DYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLN-AVILYNKIQASALRPDNYSFPFVL 83
D+AY+ F++ P Y +N I+ L N + A+ Y++++ L+P+N ++PF+
Sbjct: 75 DFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLF 134
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L +E GR HC + GLD D HV +LI MYA C + DARKVFDE+S + +
Sbjct: 135 IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK--D 192
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN+M++GY+K M EA+ LFR M
Sbjct: 193 LVSWNSMISGYSK-------------------------------MRHAGEAVGLFREMME 221
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+P+E+++++ L AC +LG ++LG W+ ++ + + + +ALI MY K G +
Sbjct: 222 AGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVS 281
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A ++F++MK K +TW MI G A +G+ EA+ +F M + P++IT I ILSAC
Sbjct: 282 ARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACAS 341
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+G ++LG++ I S G + + ++D+ + G L A ++ MP N W
Sbjct: 342 IGALDLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMP-NKNEVSWN 399
Query: 384 SLLAASNIYGDVE 396
++++A +G +
Sbjct: 400 AMISALAFHGQAQ 412
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 11/246 (4%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENV 206
N+ + A + D A F + + S+ +I G + ++ + A+ + RM+ +
Sbjct: 64 NSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGL 123
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KP+ + AC+ L AVE G H + + GL+ ++++LI MYA+ GK+G A +
Sbjct: 124 KPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARK 183
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ + K +++W +MI+G + EA+ +F M A +PNE++ +++L AC +G
Sbjct: 184 VFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGD 243
Query: 327 VELGRRYFNIMKSRYGIEPKIE----QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
++LG + +E K+ +I + G+ G L A ++ M + + W
Sbjct: 244 LKLG-----TWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK-KKDKVTW 297
Query: 383 GSLLAA 388
+++
Sbjct: 298 NAMITG 303
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 288/534 (53%), Gaps = 83/534 (15%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYS--IFTH-KSKPDVYLYNTTIKALCQT--DNPLNAVIL 63
NNHLLS+ I ++ YS +F+H P+ Y +N I+AL T + PL A+ L
Sbjct: 57 NNHLLSKAIH------LKNFPYSSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPL-ALSL 109
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++++ + +L PDN++FPF + L+++ H L SD H +LI YA
Sbjct: 110 FHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYAR 169
Query: 124 CK-------------------------------CIYDARKVF-----------DELSL-- 139
C C +A +VF DE+SL
Sbjct: 170 CGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVS 229
Query: 140 -------------------------RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
N + + +++ YAK G+L +AR +F+ M ++
Sbjct: 230 LLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARD 289
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
VI+W +I+GYAQ +EAI LF M+ + V ++I + A LSACA +GA++LG+ I
Sbjct: 290 VITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDE 349
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y Q G + + ALIDMYAKSG + A +VF++M K+ +W MI+ LA HG +E
Sbjct: 350 YASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKE 409
Query: 295 ALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
AL +F M E +PN+ITF+ +LSAC H GLV+ G R F++M + +G+ PKIE Y C
Sbjct: 410 ALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSC 469
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLL RAG+L EA L+R+MP + + G+LL A +V++GE ++ +++++P N
Sbjct: 470 MVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSN 529
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
SGNY I S IYA L W +S ++R +MR G+ K PGCS+IEV +HEF AGD
Sbjct: 530 SGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGD 583
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/480 (38%), Positives = 281/480 (58%), Gaps = 41/480 (8%)
Query: 14 SRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS- 70
++ ++ C SS G YA IF + P +N I+ + +P NAV Y + AS
Sbjct: 37 TKLLELCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASN 96
Query: 71 -ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
R D + F LKA + ++H Q + G ++DV L+Q
Sbjct: 97 GLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADV-----LLQ---------- 141
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
T++ YAK+GDL+ A+ LF+ M + ++ SW LIAG+AQ
Sbjct: 142 ------------------TTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGS 183
Query: 190 QPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+P +AI F+RM+V+ N++P+ + + AL AC+QLGA++ GE +H YI + L++ V +
Sbjct: 184 RPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVC 243
Query: 249 NALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
N +IDMYAK G + KA VFENM+ +KS+ITW TMI A+HG G +ALD+F ++ R+ +
Sbjct: 244 NVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGM 303
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
P+ ++++A+L AC H GLVE G + FN M R G+EP I+ YG M+DLLGRAG L+EA
Sbjct: 304 SPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAY 362
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 427
++ +PF N +W +LL A YGDVE+ E A + L+++ + G + +LSN+YA
Sbjct: 363 DIVSSLPF-PNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQ 421
Query: 428 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
RW++ G++R MR VKK PG SYIE+ ++++FV GD SH +Y L +IN ++K
Sbjct: 422 RWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIK 481
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + L + +D+ + +G D A +F +PD+ +N I Q P +A++ +
Sbjct: 133 GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTF 192
Query: 65 NKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+++ LRP+ + L A +L ++ G +H V LDS+V V +I MYA
Sbjct: 193 KRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAK 252
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + A VF+ + ++ WNTM+ +A GD
Sbjct: 253 CGSMDKAYWVFENMRCDK-SLITWNTMIMAFAMHGD------------------------ 287
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++A+ LF ++ + PD ++ LA L AC G VE G + N + Q GL
Sbjct: 288 -------GHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEP 340
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+ +++D+ ++G++ +A + ++ +++ W T++ +G
Sbjct: 341 NIKHYGSMVDLLGRAGRLKEAYDIVSSLPFPNMVLWQTLLGACRTYG 387
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 284/499 (56%), Gaps = 9/499 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N ++S + LG D A S+F + +N I Q A
Sbjct: 119 MPVRSVSSWNAMVSLN----THLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKA 174
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ L+++ + S++ PD ++ VL A L + +G+++H + T + + V ALI
Sbjct: 175 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIS 234
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA + +AR++ D+ NV + ++ GY K+GD+ +AR +F +M ++V++WT
Sbjct: 235 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 294
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q + +EAI LFR M +P+ + A LS CA L ++ G+ IH +
Sbjct: 295 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 354
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDM 298
L ++NA+I MYA+SG A ++F+ + K ITWT+MI LA HG G EA+ +
Sbjct: 355 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 414
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M RA V+P+ IT++ +LSAC H G V G+RY++ +K+ + I P++ Y CM+DLL
Sbjct: 415 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 474
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG EA++ +RRMP E +A WGSLL+A ++ + EL E A + L+ ++P+NSG Y+
Sbjct: 475 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 534
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
++N+Y+ GRW+++ +I K ++ V+K G S+ + ++H F A D HP D +Y +
Sbjct: 535 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 594
Query: 479 LCKINGQMK---FAEHLQN 494
++ ++K F LQ+
Sbjct: 595 AARMWEEIKGAGFVPDLQS 613
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 192/428 (44%), Gaps = 39/428 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + D + + L + A+ + A P ++ VL +
Sbjct: 11 ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAV 70
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+GR++H V GL S V V +++ MY C A VF+ + +R +V+ WN
Sbjct: 71 TQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVR--SVSSWN 128
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVK 207
MV+ +G ++ A +LFE M +++++SW +IAGY Q +A+ LF RM E ++
Sbjct: 129 AMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMA 188
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG-------- 259
PDE + + LSACA LG V +G+ +H YI + + + NALI YAKSG
Sbjct: 189 PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRI 248
Query: 260 ----------------------KIG---KALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
KIG A ++F M N+ V+ WT MI G +G E
Sbjct: 249 MDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDE 308
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+D+F M +PN T A+LS C + ++ G++ + R +E +I
Sbjct: 309 AIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAIRSLLEQSSSVSNAII 367
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHN 412
+ R+G A ++ ++ + W S++ A +G E + +++ +EP
Sbjct: 368 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 427
Query: 413 SGNYAILS 420
+LS
Sbjct: 428 ITYVGVLS 435
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 140/277 (50%), Gaps = 36/277 (12%)
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
+AK G L +AR +F M E++ +SWT ++ G + + EAI M + P + +
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--------------- 258
LS+CA A +G +H+++ + GL + VP+ N++++MY K
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 259 ----------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
G++ A +FE+M ++S+++W MIAG +GL +AL +FSRM
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 303 -ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+ + P+E T ++LSAC ++G V +G++ + I+++ ++ +I ++
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--ALISTYAKS 239
Query: 361 GYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVE 396
G ++ A +++ + M + N + +LL GD+E
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
M+AKSG++ A VF M + ++WT M+ GL G EA+ M P + T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+LS+C +GR+ + + + G+ + ++++ G+ G + A + RM
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFV-VKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHL 405
P + ++ W ++++ + G ++L E + +
Sbjct: 120 PVRSVSS-WNAMVSLNTHLGRMDLAESLFESM 150
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 281/491 (57%), Gaps = 6/491 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N ++S + LG D A S+F + +N I Q A
Sbjct: 225 MPVRSVSSWNAMVSLN----THLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKA 280
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ L+++ + S++ PD ++ VL A L + +G+++H + T + + V ALI
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIS 340
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA + +AR++ D+ NV + ++ GY K+GD+ +AR +F +M ++V++WT
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 400
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q + +EAI LFR M +P+ + A LS CA L ++ G+ IH +
Sbjct: 401 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDM 298
L ++NA+I MYA+SG A ++F+ + K ITWT+MI LA HG G EA+ +
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M RA V+P+ IT++ +LSAC H G V G+RY++ +K+ + I P++ Y CM+DLL
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG EA++ +RRMP E +A WGSLL+A ++ + EL E A + L+ ++P+NSG Y+
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
++N+Y+ GRW+++ +I K ++ V+K G S+ + ++H F A D HP D +Y +
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Query: 479 LCKINGQMKFA 489
++ ++K A
Sbjct: 701 AARMWEEIKGA 711
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 199/447 (44%), Gaps = 43/447 (9%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N LLS F S G A +F + D + + L + A+ + A
Sbjct: 102 NSLLSMFAKS----GRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTA 157
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
P ++ VL + +GR++H V GL S V V +++ MY C
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSET 217
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A VF+ + +R +V+ WN MV+ +G ++ A +LFE M +++++SW +IAGY Q
Sbjct: 218 ATTVFERMPVR--SVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275
Query: 190 QPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+A+ LF RM E ++ PDE + + LSACA LG V +G+ +H YI + + +
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335
Query: 249 NALIDMYAKSG------------------------------KIG---KALQVFENMKNKS 275
NALI YAKSG KIG A ++F M N+
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V+ WT MI G +G EA+D+F M +PN T A+LS C + ++ G++ +
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IH 454
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
R +E +I + R+G A ++ ++ + W S++ A +G
Sbjct: 455 CRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Query: 396 ELGECALQHLIK--LEPHNSGNYAILS 420
E + +++ +EP +LS
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 173/340 (50%), Gaps = 40/340 (11%)
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCKC----IYDARKVFDELSLRVWNVAVWNTM 150
GR IH + V GL + ++ L+ Y + DAR++FDE+ L NV WN++
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++ +AK G L +AR +F M E++ +SWT ++ G + + EAI M + P +
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS------------ 258
+ LS+CA A +G +H+++ + GL + VP+ N++++MY K
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 224
Query: 259 -------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G++ A +FE+M ++S+++W MIAG +GL +AL +F
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 300 SRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLL 357
SRM + + P+E T ++LSAC ++G V +G++ + I+++ ++ +I
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--ALISTY 342
Query: 358 GRAGYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVE 396
++G ++ A +++ + M + N + +LL GD+E
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 281/494 (56%), Gaps = 9/494 (1%)
Query: 1 MIVRG-LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+IV G L N+L + + LG A +F PDV +N I + L
Sbjct: 156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE 215
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH--CQTVGTGLDSDVHVVAAL 117
A+ LY K+ + + PD Y+ +L LS I LG+ +H + G S++ + AL
Sbjct: 216 ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNAL 275
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ MY CK A++ FD + + ++ WNTMV G+ ++GD+ A+A+F+ M +++++S
Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKK--DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVS 333
Query: 178 WTTLIAGYAQM--DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
W +L+ GY++ DQ + VE VKPD + M++ +S A G + G W+H
Sbjct: 334 WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGL 393
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + L L++ALIDMY K G I +A VF+ K V WT+MI GLA HG G++A
Sbjct: 394 VIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F RM+ V PN +T +A+L+AC H GLVE G FN MK ++G +P+ E YG ++D
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 356 LLGRAGYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
LL RAG ++EA+ ++ ++MP + ++WGS+L+A D+E E AL L+KLEP G
Sbjct: 514 LLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG 573
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT-SHPDFD 473
Y +LSNIYA +GRW S K R+ M + GVKK G S + + +H FVA + +HP +
Sbjct: 574 GYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWT 633
Query: 474 RLYQILCKINGQMK 487
+ +IL + +MK
Sbjct: 634 EIKRILQHLYNEMK 647
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 193/422 (45%), Gaps = 82/422 (19%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P+V++YNT I A+ + N LY+ + + PD +F +++KA LS + ++I
Sbjct: 98 PNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQI 152
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
HC + +G LSL + +WN++V Y ++G
Sbjct: 153 HCHIIVSGC-----------------------------LSLGNY---LWNSLVKFYMELG 180
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+ A +F M +V S+ +I GYA+ EA+ L+ +M + ++PDE +L+ L
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV 240
Query: 219 ACAQLGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
C L + LG+ +H +IE+ G ++ + L+NAL+DMY K + G A + F+ MK K +
Sbjct: 241 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM 300
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMER-------------------------------- 304
+W TM+ G G A +F +M +
Sbjct: 301 RSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTI 360
Query: 305 -ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+VKP+ +T ++++S + G + G R+ + + R ++ +ID+ + G +
Sbjct: 361 VEKVKPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE-----PHNSGNYAI 418
+ A + + E + A+W S++ +G+ G+ ALQ +++ P+N A+
Sbjct: 420 ERAFMVFKTAT-EKDVALWTSMITGLAFHGN---GQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 419 LS 420
L+
Sbjct: 476 LT 477
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 33/206 (16%)
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC----------C 322
N +V + TMI+ A+ E ++S M R RV P+ TF+ ++ A C
Sbjct: 97 NPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHC 154
Query: 323 HV---GLVELGRRYFNIMKSRY------GI---------EPKIEQYGCMIDLLGRAGYLQ 364
H+ G + LG +N + Y G+ P + + MI + G+
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 365 EAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
EA KL +M E + SLL D+ LG+ + + P S N + +
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNA 274
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKM 447
+ + + ESG ++ M K M
Sbjct: 275 LLDMYFKCKESGLAKRAFDAMKKKDM 300
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 271/465 (58%), Gaps = 6/465 (1%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A SK +N I L A ++ K+ S ++ D ++F V+
Sbjct: 240 DAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVC 299
Query: 87 VKLSTIELGREIHCQTVGT----GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
LG+E+H + T D + V ALI Y C + A+++F+++ R
Sbjct: 300 ANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPER-- 357
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ WN +++GY V ++ A++ F M EKN++SW +I+G AQ+ EA+ F RM+
Sbjct: 358 DLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMK 417
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
++ +P + A A+ +C+ LG+++ G +H + +YG + + NALI MYA+ G +
Sbjct: 418 LQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVD 477
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A +F NM I+W MIA L HG G +A+++F M + + P+ I+F+ ++SAC
Sbjct: 478 AAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACS 537
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLV+ GR+YF+ M + YG+ P E Y +IDLL RAG EA++++ MPFE A IW
Sbjct: 538 HAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIW 597
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
+LLA I+G+++LG A + L +L+P + G Y +LSN+YA+ G+WN+ K+RK+MRD
Sbjct: 598 EALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDR 657
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
GVKK PGCS+IEV +VH F+ GD +HP+ ++Y L ++ +M+
Sbjct: 658 GVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMR 702
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 205/471 (43%), Gaps = 82/471 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQ------- 53
MI G H+L+R ID S +YA +F +PD+ T I A
Sbjct: 39 MIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLS 98
Query: 54 ----TDNPL--------NAVI--------------LYNKIQASALRPDNYSFPFVLKAVV 87
+D PL NA+I L+ +Q RPDNY+F VL A+
Sbjct: 99 RKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALA 158
Query: 88 KLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASC---------KCIYDARKVFDEL 137
++ E +++HC V +G V+ ALI Y C + +ARK+FDE+
Sbjct: 159 LVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEM 218
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
R + W T++ GY K DL+ A+ ++K ++W +I+GYA EA +
Sbjct: 219 PNR--DELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEM 276
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY----IEQYGLNTIVPLNNALID 253
FR+M + ++ DE + +S CA G LG+ +H Y + + +P+NNALI
Sbjct: 277 FRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALIT 336
Query: 254 MYAKSGKIGKALQVFEN-------------------------------MKNKSVITWTTM 282
Y K GK+ A ++F M K++++W M
Sbjct: 337 FYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIM 396
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I+GLA G EAL F+RM+ +P + F + +C +G ++ GR+ + RYG
Sbjct: 397 ISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQ-LHAQVVRYG 455
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
E + +I + R G + A L MP +A W +++AA +G
Sbjct: 456 YESSLSAGNALITMYARCGVVDAAHCLFINMPC-VDAISWNAMIAALGQHG 505
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 179/425 (42%), Gaps = 55/425 (12%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
+ L R +H + +G H++ LI +Y+ + AR +FDE+ ++ T+
Sbjct: 28 SYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQP--DIVARTTL 85
Query: 151 VAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+A Y+ GDL +R +F + ++ + + +I Y+ + AI LF MQ +N +P
Sbjct: 86 IAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRP 145
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGK------- 260
D + L A A + E + +H + + G + + NALI Y K
Sbjct: 146 DNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSS 205
Query: 261 --IGKALQVFENMKNKSVITWTT-------------------------------MIAGLA 287
+ +A ++F+ M N+ ++WTT MI+G A
Sbjct: 206 SLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYA 265
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR---YFNIMKSRYGIE 344
GL EA +MF +M ++++ +E TF +++S C + G LG+ YF + +
Sbjct: 266 HRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPD 325
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQH 404
+ +I + G + A+++ +MP E + W +L+ Y +V + A
Sbjct: 326 VAMPVNNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSG---YVNVRCMDEAKSF 381
Query: 405 LIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA 464
++ N ++ I+ + A +G E+ K M+ G + C Y + V
Sbjct: 382 FNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEP---CDYAFAGAIISCSVL 438
Query: 465 GDTSH 469
G H
Sbjct: 439 GSLKH 443
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A+ +F + D +N I AL Q A+ L+ ++ + PD SF V+
Sbjct: 474 GVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVI 533
Query: 84 KAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
A ++ GR+ G++ D A +I + +A++V + +
Sbjct: 534 SACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEP- 592
Query: 143 NVAVWNTMVAGYAKVGDLN----NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
+W ++AG G+++ A LFEL + + ++ L YA Q N+ +
Sbjct: 593 GAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDG-TYVLLSNMYAVAGQWNDMAKVR 651
Query: 199 RRMQVENVKPD 209
+ M+ VK +
Sbjct: 652 KLMRDRGVKKE 662
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 278/485 (57%), Gaps = 42/485 (8%)
Query: 8 QNNHLLS--RFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+NH L+ R + SC S+ YA SIF + PD + +NT I+A + ++ L
Sbjct: 16 HHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHADSSP-SFSLSL 74
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++K+ + + PD+++FPFVLKA +L T G ++H G DSDV+V LI Y
Sbjct: 75 FSKMAMAGVSPDHFTFPFVLKACARLQT---GLDLHSLLFKLGFDSDVYVQNGLIHFYGC 131
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C G L+ A +FE M E++++SW+++IA
Sbjct: 132 C---------------------------------GFLDFALKVFEEMPERDLVSWSSMIA 158
Query: 184 GYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+A+ EA+ LF+RMQ V VKPDE+ +L+ +SA + LG +ELG+WI +I + GL
Sbjct: 159 CFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLE 218
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
V L AL+DM+++ G I ++++VF+ M ++V+TWT +I GLA+HG EAL MF M
Sbjct: 219 FTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEM 278
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+P+ +TF +L AC H GLV G F +++ YG+EP E YGCM+DLLGRAG
Sbjct: 279 RNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGL 338
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L EA K + MP N+ IW +LL A + +EL E + + +L+ ++ G+Y +LSN+
Sbjct: 339 LNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNV 398
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
Y +GRW E +R MR+ + K PGCS I V+ +HEFVAGD +HP F+ + + L +
Sbjct: 399 YGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSM 458
Query: 483 NGQMK 487
+K
Sbjct: 459 IDSLK 463
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 36/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + ++ + I GF D+A +F + D+ +++ I + A+ L+
Sbjct: 114 GFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 65 NKIQ-ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++Q ++PD V+ A+ L +ELG+ I GL+ V + AL+ M++
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C CI ++ +VFDE+ R NV W T LI
Sbjct: 234 CGCIEESMRVFDEMGER--NVLTW-------------------------------TALIN 260
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLN 242
G A + EA+ +F M+ +PD + L AC+ G V G + I +YG+
Sbjct: 261 GLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGME 320
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ ++D+ ++G + +A + + M + I W T++ H
Sbjct: 321 PLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNH 368
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 304/508 (59%), Gaps = 19/508 (3%)
Query: 2 IVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I L + +++ SR + + S G YA ++FTH P+++ YN+ I +
Sbjct: 48 IANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDK 107
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
++ ++ K+ +RP++++F ++K+ V LS++E ++ T+ +G SDV+ V+++I
Sbjct: 108 SLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSLE---QVFTLTMKSGNSSDVYFVSSVIN 164
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+++ I+ AR+VFDE S R NV W ++V+GY G +N R +F+ M ++N S +
Sbjct: 165 VFSKHGAIHLARQVFDESSNR--NVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNS 222
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVEN-----VKPDEIAMLAALSACAQLGAVELGEWIHN 234
+++GY + +E + LFR ++ ++ VK + +++ L+AC +GA E G+WIH+
Sbjct: 223 AMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHS 282
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y+E+ GL + L ALID YAK G + A +VF+ M K V TW+ MI GLA++G +
Sbjct: 283 YVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNKM 342
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
AL++F +ME+ KPNE+TF+ +L+AC H L R F IM +Y I P IE YGC++
Sbjct: 343 ALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCIV 402
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
D+L R+G +++A + M E + AIWGSLL ++G ELG+ ++LI+ +P +SG
Sbjct: 403 DILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFDPEHSG 462
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y +L+N+YA +G+W ++RK+M+D GV + G S+IE+ + +H+F A D
Sbjct: 463 RYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIEIDQTLHKFSADDKCCLYSGE 522
Query: 475 LYQILCKINGQMKFAEHLQNEFSGVLES 502
+Y++L + +++ EFSG +S
Sbjct: 523 IYEVLSHLGKKVE-------EFSGDKDS 543
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 256/454 (56%), Gaps = 34/454 (7%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
GF A + F S D+ +N+ I Q +P NA+ ++ K++ SA+ PD + V+
Sbjct: 479 GFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVV 538
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L+ ++ G IH V G +SD HV ALI MYA
Sbjct: 539 PACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYA--------------------- 577
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
K G L +A LF K+ ++W +IA Y Q EAI+ F +M+
Sbjct: 578 ------------KCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+EN P+ + ++ L A A L A G H I Q G + + N+LIDMYAK G++
Sbjct: 626 LENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLD 685
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+ ++F M +K ++W M++G A+HG G A+ +FS M+ ++V+ + ++F+++LSAC
Sbjct: 686 YSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACR 745
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVE GR+ F+ M +Y I+P +E Y CM+DLLGRAG E ++ MP E +A +W
Sbjct: 746 HAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVW 805
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL + ++ +V+LGE AL HL+KLEP N ++ +LS+IYA GRW ++GK R M D+
Sbjct: 806 GALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDL 865
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
G+KK PGCS++E+ +VH F GD SHP + ++
Sbjct: 866 GLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMH 899
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 199/451 (44%), Gaps = 67/451 (14%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
RGL+++ + + +D S +G A +F K DV +N I L Q+++P AV
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH--------CQTVGTGL-------- 107
+ +Q + P + S + + KLS IEL R IH V GL
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCG 277
Query: 108 -------------DSDVHVVAALIQMYASCKCIYDARKVFDELSL---RVWNVAVWNTMV 151
D D ++ YA C + ++FD++ L R+ V+ + +
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL 337
Query: 152 AG----------------------------------YAKVGDLNNARALFELMTEKNVIS 177
A YAK G+ A+ LF + +++++
Sbjct: 338 AAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA 397
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+ +IA Q P EA++LF+ MQ + +KP+ + +++ L ACA L ++LG+ IH +
Sbjct: 398 WSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV 457
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ +++ + AL+ MYAK G AL F M ++ ++TW ++I G A G A+D
Sbjct: 458 KADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAID 517
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF ++ + + P+ T + ++ AC + ++ G ++ + G E +ID+
Sbjct: 518 MFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI-VKLGFESDCHVKNALIDMY 576
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ G L AE L + F + W ++AA
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 36/371 (9%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G ++ A +F D+ ++ I AL QT P A+ L+ ++Q ++P+ + +L
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A LS ++LG+ IHC TV +DSD+ AL+ MYA C A F+ +S R +
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR--D 495
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN+++ GYA++GD P AI +F ++++
Sbjct: 496 IVTWNSLINGYAQIGD-------------------------------PYNAIDMFYKLRL 524
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ PD M+ + ACA L ++ G IH I + G + + NALIDMYAK G +
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 264 ALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A +F K +TW +IA +G +EA+ F +M PN +TF+++L A
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
++ G F+ + G +ID+ + G L +EKL M + + W
Sbjct: 645 YLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-W 702
Query: 383 GSLLAASNIYG 393
++L+ ++G
Sbjct: 703 NAMLSGYAVHG 713
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 166/331 (50%), Gaps = 36/331 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV G +++H ++ I+ S D A S+F P L+N+ I+A ++ A
Sbjct: 55 IIVSGF-KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEA 113
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +Y + L PD Y+F FVLKA ++ G H + GL+ DV + A L+ M
Sbjct: 114 LEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDM 173
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ K+GDL AR +F+ M +++V++W
Sbjct: 174 YS---------------------------------KMGDLKRAREVFDKMPKRDVVAWNA 200
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+IAG +Q + P EA+ FR MQ+ V+P +++L +L +EL IH Y+ +
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRD 260
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
++ V +N LID+Y+K G + A +VF+ M ++ ++W TM+AG A +G E L++F
Sbjct: 261 FSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGR 331
+M+ V+ N+++ ++ A +E G+
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
AR++F+ + I W ++I Y + Q NEA+ ++ M + ++PD+ L AC
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
++ G W H I++ GL V + L+DMY+K G + +A +VF+ M + V+ W M
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
IAGL+ EA+D F M+ V+P+ ++ + + C + +EL R + R
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR-- 259
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ +IDL + G + A ++ +M + + WG+++A
Sbjct: 260 -DFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LI++Y+ K A VF++ N S I W +MI EAL+M+ M ++P+
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128
Query: 311 EITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ TF +L AC G + L +F+ R G+E + ++D+ + G L+ A ++
Sbjct: 129 KYTFTFVLKAC--TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 370 LRRMPFEANAAIWGSLLAA 388
+MP + + W +++A
Sbjct: 187 FDKMP-KRDVVAWNAMIAG 204
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 283/541 (52%), Gaps = 68/541 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A IF + +V L+N + A Q ++ + L+ ++QA+ +RP+ +++P +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM----------------------- 120
+ I+LG +IH +V TG +SD++V LI M
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 121 --------YASCKCIYDARKVFDELS-LRVW----------------------------- 142
Y +C DA F E+ +W
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 143 -------NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+V++WN +V YA+ G + A + FE M K+ I+ L++G+AQ EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEAL 532
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F RM VK + ++ALSA A L ++ G+ IH + + G + + NALI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K G A F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L+AC HVGLVE G YF M YGI P+ + Y C+ID+ GRAG L A+K + MP
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
A+A +W +LL+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ +W ++
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
RK+MRD GV+K PG S+IEV VH F GD HP +++Y L IN ++ + Q +
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832
Query: 496 F 496
+
Sbjct: 833 Y 833
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 173/387 (44%), Gaps = 35/387 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+ RGL + + + ID S G A +F S D + + Q A+
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY ++ + + P Y VL + K GR IH Q G S++ V A+I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G A +F M ++ +++ TL
Sbjct: 189 LRC---------------------------------GSFRLAERVFCDMPHRDTVTFNTL 215
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+G+AQ A+ +F MQ + PD + + + L+ACA LG ++ G +H+Y+ + G+
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
++ + +L+D+Y K G + AL +F + +V+ W M+ ++ ++F +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ A ++PN+ T+ IL C ++LG + + + + G E + G +ID+ + G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYG 394
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAA 388
+L++A ++L M E + W S++A
Sbjct: 395 WLEKARRVL-EMLKEKDVVSWTSMIAG 420
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-EL 228
MT + S +AG+ + P + ++LF ++ + AL AC G ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
IH GL + N LID+Y+K+G + A +VFE + + ++W M++G A
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+GLG EAL ++ +M RA V P ++LS+C L G R + ++G +I
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMP 374
+I L R G + AE++ MP
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 281/491 (57%), Gaps = 6/491 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N ++S + LG D A S+F + +N I Q A
Sbjct: 225 MPVRSVSSWNAMVSLN----THLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKA 280
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ L+++ + S++ PD ++ VL A L + +G+++H + T + + V ALI
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIS 340
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA + +AR++ D+ NV + ++ GY K+GD+ +AR +F +M ++V++WT
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 400
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q + +EAI LFR M +P+ + A LS CA L ++ G+ IH +
Sbjct: 401 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDM 298
L ++NA+I MYA+SG A ++F+ + K ITWT+MI LA HG G EA+ +
Sbjct: 461 LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M RA V+P+ IT++ +LSAC H G V G+RY++ +K+ + I P++ Y CM+DLL
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG EA++ +RRMP E +A WGSLL+A ++ + EL E A + L+ ++P+NSG Y+
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
++N+Y+ GRW+++ +I K ++ V+K G S+ + ++H F A D HP D +Y +
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Query: 479 LCKINGQMKFA 489
++ ++K A
Sbjct: 701 AARMWEEIKGA 711
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 198/447 (44%), Gaps = 43/447 (9%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N LLS F S G A +F + D + + L + A+ + A
Sbjct: 102 NSLLSMFAKS----GRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTA 157
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
P ++ VL + +GR++H V GL S V V +++ MY C
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAET 217
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A VF+ + +R +V+ WN MV+ +G ++ A +LFE M ++++SW +IAGY Q
Sbjct: 218 ASTVFERMPVR--SVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275
Query: 190 QPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+A+ LF RM E ++ PDE + + LSACA LG V +G+ +H YI + + +
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335
Query: 249 NALIDMYAKSG------------------------------KIG---KALQVFENMKNKS 275
NALI YAKSG KIG A ++F M N+
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V+ WT MI G +G EA+D+F M +PN T A+LS C + ++ G++ +
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IH 454
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
R +E +I + R+G A ++ ++ + W S++ A +G
Sbjct: 455 CRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Query: 396 ELGECALQHLIK--LEPHNSGNYAILS 420
E + +++ +EP +LS
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 172/340 (50%), Gaps = 40/340 (11%)
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCKC----IYDARKVFDELSLRVWNVAVWNTM 150
GR IH + V GL + ++ L+ Y + DAR++FDE+ L NV WN++
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++ +AK G L +AR +F M E++ +SWT ++ G + + EAI M + P +
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS------------ 258
+ LS+CA A +G +H+++ + GL + VP+ N++++MY K
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFER 224
Query: 259 -------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G++ A +FE+M +S+++W MIAG +GL +AL +F
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 300 SRM-ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLL 357
SRM + + P+E T ++LSAC ++G V +G++ + I+++ ++ +I
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--ALISTY 342
Query: 358 GRAGYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVE 396
++G ++ A +++ + M + N + +LL GD+E
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 256/454 (56%), Gaps = 34/454 (7%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
GF A + F S D+ +N+ I Q +P NA+ ++ K++ SA+ PD + V+
Sbjct: 479 GFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVV 538
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L+ ++ G IH V G +SD HV ALI MYA
Sbjct: 539 PACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYA--------------------- 577
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
K G L +A LF K+ ++W +IA Y Q EAI+ F +M+
Sbjct: 578 ------------KCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+EN P+ + ++ L A A L A G H I Q G + + N+LIDMYAK G++
Sbjct: 626 LENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLX 685
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+ ++F M +K ++W M++G A+HG G A+ +FS M+ ++V+ + ++F+++LSAC
Sbjct: 686 YSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACR 745
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVE GR+ F+ M +Y I+P +E Y CM+DLLGRAG E ++ MP E +A +W
Sbjct: 746 HXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVW 805
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL + ++ +V+LGE AL HL+KLEP N ++ +LS+IYA GRW ++GK R M D+
Sbjct: 806 GALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDL 865
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
G+KK PGCS++E+ +VH F GD SHP + ++
Sbjct: 866 GLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMH 899
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 199/451 (44%), Gaps = 67/451 (14%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
RGL+++ + + +D S +G A +F K DV +N I L Q+++P AV
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH--------CQTVGTGL-------- 107
+ +Q + P + S + + KLS IEL R IH V GL
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCG 277
Query: 108 -------------DSDVHVVAALIQMYASCKCIYDARKVFDELSL---RVWNVAVWNTMV 151
D D ++ YA C + ++FD++ L R+ V+ + +
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL 337
Query: 152 AG----------------------------------YAKVGDLNNARALFELMTEKNVIS 177
A YAK G+ A+ LF + +++++
Sbjct: 338 AAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA 397
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+ +IA Q P EA++LF+ MQ + +KP+ + +++ L ACA L ++LG+ IH +
Sbjct: 398 WSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV 457
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ +++ + AL+ MYAK G AL F M ++ ++TW ++I G A G A+D
Sbjct: 458 KADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAID 517
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF ++ + + P+ T + ++ AC + ++ G ++ + G E +ID+
Sbjct: 518 MFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI-VKLGFESDCHVKNALIDMY 576
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ G L AE L + F + W ++AA
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 36/371 (9%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G ++ A +F D+ ++ I AL QT P A+ L+ ++Q ++P+ + +L
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A LS ++LG+ IHC TV +DSD+ AL+ MYA C A F+ +S R +
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR--D 495
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN+++ GYA++GD P AI +F ++++
Sbjct: 496 IVTWNSLINGYAQIGD-------------------------------PYNAIDMFYKLRL 524
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ PD M+ + ACA L ++ G IH I + G + + NALIDMYAK G +
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 264 ALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A +F K +TW +IA +G +EA+ F +M PN +TF+++L A
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
++ G F+ + G +ID+ + G L +EKL M + + W
Sbjct: 645 YLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-W 702
Query: 383 GSLLAASNIYG 393
++L+ ++G
Sbjct: 703 NAMLSGYAVHG 713
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 166/331 (50%), Gaps = 36/331 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV G +++H ++ I+ S D A S+F P L+N+ I+A ++ A
Sbjct: 55 IIVSGF-KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEA 113
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +Y + L PD Y+F FVLKA ++ G H + GL+ DV + A L+ M
Sbjct: 114 LEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDM 173
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ K+GDL AR +F+ M +++V++W
Sbjct: 174 YS---------------------------------KMGDLKRAREVFDKMPKRDVVAWNA 200
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+IAG +Q + P EA+ FR MQ+ V+P +++L +L +EL IH Y+ +
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRD 260
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
++ V +N LID+Y+K G + A +VF+ M ++ ++W TM+AG A +G E L++F
Sbjct: 261 FSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGR 331
+M+ V+ N+++ ++ A +E G+
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
AR++F+ + I W ++I Y + Q NEA+ ++ M + ++PD+ L AC
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
++ G W H I++ GL V + L+DMY+K G + +A +VF+ M + V+ W M
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
IAGL+ EA+D F M+ V+P+ ++ + + C + +EL R + R
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR-- 259
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ +IDL + G + A ++ +M + + WG+++A
Sbjct: 260 -DFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LI++Y+ K A VF++ N S I W +MI EAL+M+ M ++P+
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128
Query: 311 EITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ TF +L AC G + L +F+ R G+E + ++D+ + G L+ A ++
Sbjct: 129 KYTFTFVLKAC--TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 370 LRRMPFEANAAIWGSLLAA 388
+MP + + W +++A
Sbjct: 187 FDKMP-KRDVVAWNAMIAG 204
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/520 (35%), Positives = 289/520 (55%), Gaps = 34/520 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD----YAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
+ V GL + + + +C+ + SD Y+ +F H PD ++YNT I++L +
Sbjct: 33 LYVTGLHTHPFFFGKLLLNCA-VSISDHVLNYSLRLFHHFPNPDTFMYNTLIRSLSHSST 91
Query: 57 PLNAVILYNKI-QASALRPDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDVHVV 114
PL+++ + ++ + L PD++SF F LK + + G ++H G D + V
Sbjct: 92 PLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVG 151
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG-------DLNNARALF 167
LI MYA C C ARKVFDE+S NV WN +V + G +F
Sbjct: 152 TTLISMYAECGCYEYARKVFDEMSQP--NVVAWNAVVTACFRCGMWRVLGVSFGWREVVF 209
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
M ++ SW+T+I G+A+ ++A F+ + + +P E+++ LSACAQ GA E
Sbjct: 210 CEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFE 269
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
G+ +H ++E+ G IV +NNALID Y+K G + A VF LA
Sbjct: 270 FGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN--------------ISLA 315
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+HG EA+ +F ME + V+P+ +TFI++L AC H GLVE G F+ M++ YGIEP I
Sbjct: 316 MHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAI 375
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
E YGCM+DL GRA LQ+A + +R+MP N IW +LL A +I+G++EL E L +
Sbjct: 376 EHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAE 435
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG-- 465
++P+NSG++ +LSN+YA+ G+W + IR+ M + +KK+PG S IE+ K + FVAG
Sbjct: 436 MDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEK 495
Query: 466 --DTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+ + D+L +I+ ++ + +A +++ V E +
Sbjct: 496 PNEVTKEAHDKLREIMLRLREEEGYAPQVRSVLHDVEEEE 535
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 257/452 (56%), Gaps = 3/452 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + + I Q A+ L + + + P S
Sbjct: 366 GMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSF 425
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + +E GR++H V G + +V ALI MY C+ + R+VF+ + RV +
Sbjct: 426 LACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRM--RVKD 483
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN+ +A + L +AR +F+ M ++V+SWTT+I+ YAQ ++ +EA+ F+ M
Sbjct: 484 TVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLH 543
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E+ KP+ + LS C LG+ +LG+ IH ++G+++ + + NAL+ MY K G
Sbjct: 544 EHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CAD 602
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
+ +VF++M+ + + TW T I G A HGLGREA+ M+ ME V PNE+TF+ +L+AC H
Sbjct: 603 SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSH 662
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G ++F M YG+ P +E Y CM+DLLGR G +Q AEK + MP E + IW
Sbjct: 663 AGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWS 722
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A I+ + E+G A + L EP N+GNY +LSNIY+ LG W E ++RK+M+ G
Sbjct: 723 ALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRG 782
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
V K PGCS++++ +VH FV GD H + +
Sbjct: 783 VSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEI 814
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 187/389 (48%), Gaps = 29/389 (7%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
R LD++ H S I + LG A +F D+ +N+ I A C + +A IL
Sbjct: 29 RALDKSAH--SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARIL 86
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLST-IELGREIHCQTVGTGLDSDVHVVA--ALIQM 120
++ I +R A + LS LGR + + V G+ + + VA A++
Sbjct: 87 FDAISGGNVR----------TATILLSGYARLGRVLDARRVFDGM-PERNTVAWNAMVSC 135
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y I AR++FD + R +V WN+MV GY + +A LF+ M ++N+++WT
Sbjct: 136 YVQNGDITMARRLFDAMPSR--DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTV 193
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I+GY +++Q + +FR M E PD+ + LSA L + + E + + + G
Sbjct: 194 MISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTG 253
Query: 241 LNTIVPLNNALIDMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ V + +++++Y + + + A++ F+ M ++ TW+TMIA L+ G A+ ++
Sbjct: 254 FESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY 313
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
R + + P++ + L+ C G + R F + +P + + MI +
Sbjct: 314 GR-DPVKSIPSQTALLTGLARC---GRITEARILFEQIP-----DPIVVSWNAMITGYMQ 364
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G + EA++L RMPF N W ++A
Sbjct: 365 NGMVDEAKELFDRMPFR-NTISWAGMIAG 392
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 169/369 (45%), Gaps = 44/369 (11%)
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AL+ A C I +AR +F+++ + V WN M+ GY + G ++ A+ LF+ M +N
Sbjct: 325 TALLTGLARCGRITEARILFEQIPDPI--VVSWNAMITGYMQNGMVDEAKELFDRMPFRN 382
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
ISW +IAGYAQ + EA+ L + + + P ++ ++ AC+ +GA+E G +H+
Sbjct: 383 TISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHS 442
Query: 235 YIEQYGLNTIVPLNNALIDMYAK-------------------------------SGKIGK 263
+ G + NALI MY K + +
Sbjct: 443 LAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLED 502
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +F+NM ++ V++WTT+I+ A G EA++ F M KPN +LS C
Sbjct: 503 ARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGG 562
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+G +LG++ + + ++G++ ++ ++ + + G ++ K+ M E + W
Sbjct: 563 LGSAKLGQQ-IHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSME-ERDIFTWN 619
Query: 384 SLLAASNIYGDVELGECALQHLIKLEP----HNSGNYAILSNIYAILGRWNESGKIRKVM 439
+ + +G LG A++ +E N + L N + G +E + K M
Sbjct: 620 TFITGCAQHG---LGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSM 676
Query: 440 -RDMGVKKM 447
RD G+ +
Sbjct: 677 SRDYGLTPL 685
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/489 (33%), Positives = 280/489 (57%), Gaps = 51/489 (10%)
Query: 9 NNHLLSRFIDSCSS---LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
N +++++FI+ C+S ++A+ +F ++P++ L+NT + + ++PL + +
Sbjct: 57 NTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFR 116
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+ L+ V K+ + G+++HC V G+ +++VV LI MY +C
Sbjct: 117 R---------------CLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTAC- 160
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
GD++ +R +F+ + E V+++ +I
Sbjct: 161 --------------------------------GDIDASRRVFDKIDEPCVVAYNAIIMSL 188
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
A+ ++ NEA+ LFR +Q +KP ++ ML LS+CA LG+++LG W+H Y+++YG + V
Sbjct: 189 ARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYV 248
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+N LIDMYAK G + A+ VF +M + W+ +I A HG G +A+ M + M++
Sbjct: 249 KVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKE 308
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+V+P+EITF+ IL AC H GLVE G YF+ M + YGI P I+ YGCM+DLLGRAG L E
Sbjct: 309 KVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDE 368
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A K + +P + +W +LL+A + +G+VE+G+ ++ + +L+ + G+Y I SN+ A
Sbjct: 369 AYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCAR 428
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
G+W++ +RK M D G K+PGCS IEV+ VHEF AG+ H L++ L ++ +
Sbjct: 429 YGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKE 488
Query: 486 MKFAEHLQN 494
+K A ++ +
Sbjct: 489 LKSAGYVPD 497
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N +++ I+ ++ G D + +F +P V YN I +L + + A+ L+
Sbjct: 142 GVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALF 201
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L+P + + VL + L +++LGR +H G D V V LI MYA C
Sbjct: 202 RELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKC 261
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA VF ++ R + W+ ++ YA GD G
Sbjct: 262 GSLDDAVNVFRDMPKR--DTQAWSAIIVAYATHGD------------------------G 295
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+ +AI++ M+ E V+PDEI L L AC+ G VE G E+ H +YG+
Sbjct: 296 F-------QAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVP 348
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSV-ITWTTMIAGLALHG 290
+ ++D+ ++G++ +A + + + K I W T+++ + HG
Sbjct: 349 SIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHG 396
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 282/506 (55%), Gaps = 45/506 (8%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+IV G ++ LL++ I +CS+ + Y + +F PD +L+N+ IK+ + PL+
Sbjct: 32 LIVTGYGRSRSLLTKLITLACSARAIA-YTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLH 90
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V Y ++ +S + P NY+F V+K+ LS + +G+ +HC V +G D +V AAL+
Sbjct: 91 CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVT 150
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
Y+ C GD+ AR +F+ M EK++++W
Sbjct: 151 FYSKC---------------------------------GDMEGARQVFDRMPEKSIVAWN 177
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+L++G+ Q +EAI +F +M+ +PD ++ LSACAQ GAV LG W+H YI
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL+ V L ALI++Y++ G +GKA +VF+ MK +V WT MI+ HG G++A+++F
Sbjct: 238 GLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 300 SRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
++ME PN +TF+A+LSAC H GLVE GR + M Y + P +E + CM+D+LG
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLG 357
Query: 359 RAGYLQEAEKLLRRMPFEANA---AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
RAG+L EA K + ++ A A+W ++L A ++ + +LG + LI LEP N G+
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGH 417
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+ +LSNIYA+ G+ +E IR M ++K G S IEV + + F GD SH + +
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEI 477
Query: 476 YQIL------CKINGQMKFAEHLQNE 495
Y+ L CK G +E + ++
Sbjct: 478 YRYLETLISRCKEIGYAPVSEEVMHQ 503
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 277/485 (57%), Gaps = 42/485 (8%)
Query: 8 QNNHLLS--RFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+NH L+ R + SC S+ YA SIF + PD + +NT I+A + ++ L
Sbjct: 16 HHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHADSSP-SFSLSL 74
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++K+ + + PD+++FPFVLKA +L T G ++H G DSDV+V LI Y
Sbjct: 75 FSKMTMAGVSPDHFTFPFVLKACARLQT---GLDLHSLLFKLGFDSDVYVQNGLIHFYGC 131
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C G L+ A FE M E++++SW+++IA
Sbjct: 132 C---------------------------------GFLDFALKAFEEMPERDLVSWSSMIA 158
Query: 184 GYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+A+ EA+ LF+RMQ V VKPDE+ +L+ +SA + LG +ELG+WI +I + GL
Sbjct: 159 CFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLE 218
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
V L AL+DM+++ G I ++++VF+ M ++V+TWT +I GLA+HG EAL MF M
Sbjct: 219 FTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEM 278
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+P+ +TF +L AC H GLV G F +++ YG+EP E YGCM+DLLGRAG
Sbjct: 279 RNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGL 338
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L EA K + MP N+ IW +LL A + +EL E + + +L+ ++ G+Y +LSN+
Sbjct: 339 LNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNV 398
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
Y +GRW E +R MR+ + K PGCS I V+ +HEFVAGD +HP F+ + + L +
Sbjct: 399 YGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSM 458
Query: 483 NGQMK 487
+K
Sbjct: 459 IDSLK 463
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 36/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + ++ + I GF D+A F + D+ +++ I + A+ L+
Sbjct: 114 GFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 65 NKIQ-ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++Q ++PD V+ A+ L +ELG+ I GL+ V + AL+ M++
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C CI ++ +VFDE+ R NV W T LI
Sbjct: 234 CGCIEESMRVFDEMGER--NVLTW-------------------------------TALIN 260
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLN 242
G A + EA+ +F M+ +PD + L AC+ G V G + I +YG+
Sbjct: 261 GLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGME 320
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ ++D+ ++G + +A + + M + I W T++ H
Sbjct: 321 PLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNH 368
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 264/463 (57%), Gaps = 6/463 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F ++N I + + A L+ ++ + D ++F VL A
Sbjct: 247 ARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACAN 306
Query: 89 LSTIELGREIHCQTVGTGL----DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
+ G+ +H Q + ++ + V AL+ Y+ C I AR++FD ++L+ +V
Sbjct: 307 VGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK--DV 364
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
WNT+++GY + L+ A +FE M KN +SW +++GY +A+ LF +M+ E
Sbjct: 365 VSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSE 424
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
NVKP + A++AC +LGA++ G+ +H +I Q G NALI MYA+ G + +A
Sbjct: 425 NVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEA 484
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+F M N ++W MI+ L HG GREAL++F RM + P+ I+F+ +L+AC H
Sbjct: 485 HLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHS 544
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV+ G RYF MK +GI P + Y +IDLLGRAG + EA L++ MPFE +IW +
Sbjct: 545 GLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEA 604
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
+L+ GD+ELG A L K+ P + G Y +LSN Y+ G W ++ ++RK+MRD GV
Sbjct: 605 ILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGV 664
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
KK PGCS+IE +VH F+ GDT HP+ +Y+ L + +M+
Sbjct: 665 KKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMR 707
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 216/461 (46%), Gaps = 59/461 (12%)
Query: 37 SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS-ALRPDNYSFPFVLKAVVKLSTIELG 95
++ D L+N I A + + AV ++ + AS +LRPD+YSF +L A L I +
Sbjct: 117 ARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVR 176
Query: 96 R--EIHCQTVGTGLDSDVHVVAALIQMYASCK---CIYDARKVFDELSLRVWNVAVWNTM 150
++HC + +G + V AL+ +Y C+ DARKV DE+ + + W TM
Sbjct: 177 HCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNK--DDLTWTTM 234
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V GY + GD+ AR++FE + K + W +I+GY EA LFRRM +E V DE
Sbjct: 235 VVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDE 294
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIGKALQ 266
+ LSACA +G G+ +H I + N + +P+NNAL+ Y+K G I A +
Sbjct: 295 FTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARR 354
Query: 267 VFENMKNKSVITWTT-------------------------------MIAGLALHGLGREA 295
+F+NM K V++W T M++G G +A
Sbjct: 355 IFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDA 414
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F++M VKP + T+ ++AC +G ++ G++ + + G E +I
Sbjct: 415 LKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHI-VQLGFEGSNSAGNALIT 473
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+ R G ++EA + MP ++ W ++++A +G G AL+ ++ G
Sbjct: 474 MYARCGAVKEAHLMFLVMP-NIDSVSWNAMISALGQHGH---GREALELFDRMV--AEGI 527
Query: 416 YAILSNIYAILGRWNESGKI-------RKVMRDMGVKKMPG 449
Y + +L N SG + + RD G+ +PG
Sbjct: 528 YPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGI--IPG 566
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 148/351 (42%), Gaps = 26/351 (7%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+L+ YA+ + A FD + + + N +++ YA+ A A+F +
Sbjct: 93 SLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGS 152
Query: 176 I-----SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG- 229
+ S+T L++ + PN ++ ++ +K ALS C L A+ +
Sbjct: 153 LRPDDYSFTALLSAGGHL--PNISVRHCAQLHCSVLKS---GAGGALSVCNALVALYMKC 207
Query: 230 EWIHNYIEQYGLNTIVPLNNAL-----IDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
E + + +P + L + Y + G +G A VFE + K + W MI+
Sbjct: 208 ESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMIS 267
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI---MKSRY 341
G G+ EA ++F RM RV +E TF ++LSAC +VGL G+ ++ +
Sbjct: 268 GYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 401
E + ++ + G + A ++ M + + W ++L+ Y + + A
Sbjct: 328 VPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK-DVVSWNTILSG---YVESSCLDKA 383
Query: 402 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 452
++ ++ N ++ ++ + Y G ++ K+ MR VK C Y
Sbjct: 384 VEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKP---CDY 431
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 249/380 (65%), Gaps = 2/380 (0%)
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFEL 169
DV + ++ Y + + +ARKVFD +S R ++ WNTM+ GYA GD+ AR +F+
Sbjct: 115 DVFLCNVMLAAYVARGEVAEARKVFDGMSGR--DLVSWNTMIHGYAVRGDVGMAREIFDG 172
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
+++ SW+++I+ YA+ EA+ L+R M+V V PD I+M++ LSAC+ +GA+ +G
Sbjct: 173 TRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIG 232
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+H ++E + + L AL+DMYAK G I +L+VF M K V+TW++MI GLA H
Sbjct: 233 AEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANH 292
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
GLG +AL +FS M ++PNEITFI +L AC HVGLV G++YF+ M +G+ P++E
Sbjct: 293 GLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEH 352
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
YGCM+DLLGRAG+++EA +L+R M F+ + IW +LL A I+ +VE+ E A+ L L+
Sbjct: 353 YGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLD 412
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
P G+Y +LSNIYA W ++RK +R ++++PG S IE VHEFV+GD SH
Sbjct: 413 PLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSH 472
Query: 470 PDFDRLYQILCKINGQMKFA 489
P + +Y++L ++ +++ A
Sbjct: 473 PRIEEIYKMLEEMMDRLRQA 492
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF D + +++ I A + A+ L+ +++ + + PD S VL A
Sbjct: 166 AREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSA 225
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ + +G E+H ++ D+ + AL+ MYA C I ++ KVF + ++ +V W+
Sbjct: 226 MGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK--DVLTWS 283
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+M+ G A G ++A++LF M + ++P
Sbjct: 284 SMIIGLANHG-------------------------------LGHDALSLFSEMISQGLQP 312
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+EI + L AC +G V G ++ + + +G+ + ++D+ ++G + +A+++
Sbjct: 313 NEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMEL 372
Query: 268 FENMKNK-SVITWTTMIAGLALH 289
+M K I W T++ +H
Sbjct: 373 IRSMTFKPDPIIWRTLLGACRIH 395
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 255/429 (59%), Gaps = 35/429 (8%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DYA +F PD +L+NT I+ L +T P A Y ++Q DN+++ F++K
Sbjct: 2 DYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVC 61
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L + LG++IHC + GL+ V V L+ MY K I A +F+E
Sbjct: 62 GQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEE---------- 111
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
M + +++W T+I + EAI LF RM +
Sbjct: 112 -----------------------MPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGL 148
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KPD+ + LSACA LG +++G +H+ I+ GL +V ++N+LIDMYAK G + A +
Sbjct: 149 KPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYE 208
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVG 325
+F MK +++++W TMI GLA+HG G EAL++FS+M E PNE+TF+ +L AC H G
Sbjct: 209 IFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGG 268
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+VE GRRYF+IM+ Y I+P I+ YG M+D+LGRAG ++EA +L++ MP E+N+ +W +L
Sbjct: 269 MVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTL 328
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
LAA ++G++EL E Q L++LEP +S +Y +L+N+YA G+WN+ ++RK M GV+
Sbjct: 329 LAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVRKSMHIRGVQ 388
Query: 446 K-MPGCSYI 453
K PG SYI
Sbjct: 389 KPKPGNSYI 397
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 25 FSDYAYSIFTHKSKPDVYL--YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
F D + + P YL +NT I A+ L+ ++ S L+PD+ +F
Sbjct: 99 FKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVT 158
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L A L +++GR +H TGL + V V +LI MYA C + A ++F+++ R
Sbjct: 159 LSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGR-- 216
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
N+ WNTM+ G A G + A LF M E+ + +
Sbjct: 217 NIVSWNTMILGLAMHGHGDEALELFSKMLEEKLAT------------------------- 251
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKI 261
P+E+ L L AC+ G VE G + + + Y + + +++D+ ++G +
Sbjct: 252 -----PNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLV 306
Query: 262 GKALQVFENMKNKS-VITWTTMIAGLALHG 290
+A ++ ++M +S I W T++A +HG
Sbjct: 307 EEAYRLIKSMPIESNSIVWRTLLAACRVHG 336
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/465 (36%), Positives = 274/465 (58%), Gaps = 9/465 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + +V +N+ I Q A++L+ ++ A+ PD + V+ A
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAG 264
Query: 89 LSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L+ GR++H V L D+ + AL+ MYA C ++AR +FD + R +V
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR--SVVSE 322
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+++AGYAK ++ +A+ +F M EKNVI+W LIA YAQ + EAI LF +++ +++
Sbjct: 323 TSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIW 382
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ------YGLNTIVPLNNALIDMYAKSGKI 261
P L+AC + ++LG+ H ++ + +G + V + N+L+DMY K+G I
Sbjct: 383 PTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 442
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+VFE M + ++W MI G A +G ++AL +F RM + P+ +T I +LSAC
Sbjct: 443 DDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSAC 502
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV+ GRR+F+ M +GI P + Y CM+DLLGRAG+L+EAE+L++ MP E ++ +
Sbjct: 503 GHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVL 562
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W SLL A ++ +VELGE L +L+P NSG Y +LSN+YA +G+W + ++R+ M+D
Sbjct: 563 WASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKD 622
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GV K PGCS+IE+ +++ F+A D HP + ++ L I +M
Sbjct: 623 RGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 188/416 (45%), Gaps = 77/416 (18%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNPLNAVILYNKI 67
N LLS + + LG D A ++F PD YN + AL + + +A+ +
Sbjct: 87 NALLSAY----ARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAM 142
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
A + YSF L A + G ++H + DVH+ AL+ MYA C+
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERP 202
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
DAR+VFD + R NV WN+++ Y + G +
Sbjct: 203 VDARRVFDAMPER--NVVSWNSLITCYEQNGPV--------------------------- 233
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVP 246
EA+ LF M PDE+ + + +SACA L A G +H + +++ L +
Sbjct: 234 ----GEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMV 289
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVIT---------------------------- 278
LNNAL+DMYAK G+ +A +F++M ++SV++
Sbjct: 290 LNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKN 349
Query: 279 ---WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YF 334
W +IA A +G EA+ +F +++R + P T+ +L+AC ++ +++LG++ +
Sbjct: 350 VIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHV 409
Query: 335 NIMKS--RYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++K R+ P+ + + ++D+ + G + + K+ RM N + W +++
Sbjct: 410 HVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMI 464
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 138/282 (48%), Gaps = 4/282 (1%)
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY 154
R H + + + + ++ L+ YA + +AR+VFD + LR N +N +++ Y
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLR--NTFSYNALLSAY 93
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ--PNEAITLFRRMQVENVKPDEIA 212
A++G + ARALFE + + + S+ ++A A+ + +A+ M ++ + +
Sbjct: 94 ARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYS 153
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ALSACA + GE +H + + V + AL+DMYAK + A +VF+ M
Sbjct: 154 FASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMP 213
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
++V++W ++I +G EAL +F M P+E+T +++SAC + GR+
Sbjct: 214 ERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQ 273
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
M R + + ++D+ + G EA + MP
Sbjct: 274 VHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 286/497 (57%), Gaps = 15/497 (3%)
Query: 1 MIVRG-LDQNNHL---LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
+IV G L N+L L +F SLGF++ ++I +PDV +N I +
Sbjct: 155 IIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIM---PQPDVSSFNVMIVGYAKQGF 211
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH--CQTVGTGLDSDVHVV 114
L A+ LY K+ + + PD Y+ +L LS I LG+ +H + G S++ +
Sbjct: 212 GLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILR 271
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AL+ MY CK A++ FD L + ++ WNTMV G+ ++GD+ A+A+F+ M +++
Sbjct: 272 NALLDMYFKCKESGLAKRAFDALKKK--DMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRD 329
Query: 175 VISWTTLIAGYAQMDQPNEAI-TLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWI 232
++SW +L+ Y++ A+ LF M VE VKPD + M++ +S A G + G W+
Sbjct: 330 LVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWV 389
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H + + L L++ALIDMY K G I +A VF+ K V WT+MI G A HG G
Sbjct: 390 HGLMIRLQLEGDAFLSSALIDMYCKCGLIERAFMVFKTATEKDVPLWTSMITGFAFHGYG 449
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
++AL +F RM+ V PN++T +A+L+AC H GLVE G F MK ++G P+ E YG
Sbjct: 450 QQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGLVEEGLHVFYHMKEKFGFHPETEHYGS 509
Query: 353 MIDLLGRAGYLQEAEKLLR-RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
++DLL RAG L+EA+ +++ +MP + ++WGS+L+A D+E E AL L+KLEP
Sbjct: 510 LVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSILSACREGEDIETAELALSELLKLEPE 569
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT-SHP 470
G Y +LSNIYA +GRW S K R+ M GVKK G S + + VH FVA + +HP
Sbjct: 570 KEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGYSSVVGVEGVHSFVAAEKQNHP 629
Query: 471 DFDRLYQILCKINGQMK 487
+ + +IL ++ +MK
Sbjct: 630 RWTEIKRILQHLHNEMK 646
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 185/409 (45%), Gaps = 77/409 (18%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P+V++YNT I A+ + N LY+ + + PD +F ++KA LS + ++I
Sbjct: 97 PNVFVYNTMISAVSSSKN--ECFGLYSSMIRYRVSPDRQTFLHLMKASSFLSEV---KQI 151
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
HC + +G LSL + +WN++V Y ++G
Sbjct: 152 HCHIIVSGC-----------------------------LSLGNY---LWNSLVKFYMELG 179
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
L A +F +M + +V S+ +I GYA+ EA+ L+ +M + ++PDE +L L
Sbjct: 180 SLGFAEKVFAIMPQPDVSSFNVMIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLV 239
Query: 219 ACAQLGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
C L + LG+ +H +IE+ G ++ + L NAL+DMY K + G A + F+ +K K +
Sbjct: 240 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDM 299
Query: 277 ITWTTMIAGLALHGLGREALDMFSRM---------------------ERA---------- 305
+W TM+ G G A +F +M +RA
Sbjct: 300 RSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLI 359
Query: 306 --RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+VKP+ +T ++++S + G + GR +M R +E +ID+ + G +
Sbjct: 360 VEKVKPDRVTMVSLISGAANNGELSHGRWVHGLM-IRLQLEGDAFLSSALIDMYCKCGLI 418
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
+ A + + E + +W S++ +G G+ ALQ +++ +
Sbjct: 419 ERAFMVFKTAT-EKDVPLWTSMITGFAFHG---YGQQALQLFKRMQEED 463
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 254/434 (58%), Gaps = 3/434 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + DV+ + I + A+ L++ ++ D V+
Sbjct: 214 GMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVV 273
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L G H GL S ++V ALI MY+S + AR++FD S + +
Sbjct: 274 AACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD--SGQCLD 331
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN+M+AGY K G + +A+ LF +M +K+ +SWTT+I+G Q DQ +EA+T+F MQ
Sbjct: 332 QFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQA 391
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ +KPDE+ +++ +SAC + ++E G+ +H YI ++ V L +LIDMY K G +
Sbjct: 392 QGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLES 451
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV-KPNEITFIAILSACC 322
AL+VF+ M+ + W +I GLA++GL ++LDMFS ME + PNEITF +LSAC
Sbjct: 452 ALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACR 511
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVE G+ +F +M+ +Y I P I YGCM+DLLGRAGY++EAE L+ MP + W
Sbjct: 512 HAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAW 571
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL + +GD E+GE + L+ L+PH+ G + +LSNIYA G W +R M+
Sbjct: 572 GALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQW 631
Query: 443 GVKKMPGCSYIEVS 456
V K+PG S +E S
Sbjct: 632 HVPKIPGSSVVESS 645
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 195/421 (46%), Gaps = 71/421 (16%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P+ + N +KA + P + LY + A+ PD Y+ + A IE GR+
Sbjct: 68 RPNAFSCNMVLKAAREHGLPHLCLPLYASMSAA---PDCYTHTILAAACATRRAIEEGRQ 124
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+HC V G ++++ AL+ MY++C C+ DARKVFD + VW+ WNT++A Y +
Sbjct: 125 VHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFD--AGPVWDAVSWNTILAAYVQA 182
Query: 158 GDLNNARALFELMTE-------------------------------KNVISWTTLIAGYA 186
D++ A +F M E K+V +WT +I+ +
Sbjct: 183 EDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQ 242
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ + EA+ LF M+ E DE M+ ++ACA+L GE H + GL + +
Sbjct: 243 RNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLN 302
Query: 247 LNNALIDMYA-------------------------------KSGKIGKALQVFENMKNKS 275
+ NALI MY+ K+G + A ++F M +K
Sbjct: 303 VQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKD 362
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
++WTTMI+G + EAL +F+ M+ +KP+E+T ++++SAC ++ +E G+
Sbjct: 363 NVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHE 422
Query: 336 -IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
I + +Y I + +ID+ + G L+ A ++ M E W +++ + G
Sbjct: 423 YIREHQYTITVILGT--SLIDMYMKCGCLESALEVFDTME-ERGTPCWNAVIVGLAMNGL 479
Query: 395 V 395
V
Sbjct: 480 V 480
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/380 (41%), Positives = 246/380 (64%), Gaps = 2/380 (0%)
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFEL 169
DV + ++ Y S + +ARKVFD + +R ++ WNTM+ GYA G++ AR +F+
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMR--DLVSWNTMIHGYAMRGEVGLAREIFDG 79
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
+++ SW+++I+ YA+ + EA+ L+R M ++ PD I +++ +SAC+ LGA+ +G
Sbjct: 80 TEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVG 139
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+H ++E + + L ALIDMYAK G I A +VF+ M K V TW++MI GLA H
Sbjct: 140 AEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANH 199
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
GLG E+L +FS+M +KPN +TF+ +L AC HVGLV G++YF M +GIEP +E
Sbjct: 200 GLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEH 259
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
YGCM+DLLGR+G+++EA +L+R M FE + IW +LL A I+ +VE+ E A+ L L+
Sbjct: 260 YGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLD 319
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
P G+Y +LSNIYA W ++RK +R ++++PG S IE +++HEFV+GD H
Sbjct: 320 PLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLH 379
Query: 470 PDFDRLYQILCKINGQMKFA 489
P +Y++L ++ ++K A
Sbjct: 380 PRSKEIYRVLEEMMDRLKQA 399
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF D + +++ I A ++ A+ L+ ++ A+++ PD + V+ A
Sbjct: 73 AREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSD 132
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + +G E+H ++ D+ + ALI MYA C I A++VFD + + +V W+
Sbjct: 133 LGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEK--DVQTWS 190
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+M+ G A G +E+++LF +M E +KP
Sbjct: 191 SMIIGLANHG-------------------------------LGHESLSLFSKMISEGMKP 219
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+ + + L AC +G V G ++ + E +G+ V ++D+ +SG + +A Q+
Sbjct: 220 NGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQL 279
Query: 268 FENMK-NKSVITWTTMIAGLALH 289
+M I W ++ +H
Sbjct: 280 IRSMTFEPDTIIWRALLGACRIH 302
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 293/493 (59%), Gaps = 12/493 (2%)
Query: 2 IVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I L + +++ SR + + S G YA ++FTH P+++ YN+ I +
Sbjct: 12 ITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHK 71
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
++ K+ + +RP++++F ++KA V LS++E ++ ++ G SDV+ V+++I
Sbjct: 72 LFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLE---QVFTLSMKLGNSSDVYFVSSVIN 128
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
++ I+ AR+VFDE S R NV W ++V+GY G +N AR +F+ M +N S++
Sbjct: 129 AFSKHSAIHLARQVFDECSNR--NVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYS 186
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVEN-----VKPDEIAMLAALSACAQLGAVELGEWIHN 234
+++GY + +E + LFR ++ ++ +K + +++ L+AC +GA E G+WIH+
Sbjct: 187 AMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHS 246
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y+E+ GL + L ALID Y K G + A +VF M K V TW+ MI GLA++G +
Sbjct: 247 YVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKM 306
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
AL++F +ME+ KPNE+TF+ +L+AC H L R F IM +Y I P IE YGC++
Sbjct: 307 ALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVV 366
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
D+L R+G +++A + M E + AIWGSLL ++G ELG+ ++LI+ EP +SG
Sbjct: 367 DVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPKHSG 426
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y +L+N+YA +G+W ++RK+M+D GV + G S+IE+ + +H+F A D
Sbjct: 427 RYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFADDKCCLYSRE 486
Query: 475 LYQILCKINGQMK 487
+Y +L + +++
Sbjct: 487 IYDVLSHLGKKVE 499
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 276/493 (55%), Gaps = 43/493 (8%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFS---DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
V GL + L+++ I SSL S YA SI H P +N I+ ++ P +
Sbjct: 689 VSGLQGDTFLVTQLI-KFSSLSPSKDLSYAQSILDHSVHPVPLPWNILIRGYADSNTPKD 747
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ +Y ++ +RP++ +FPF+LKA + G+++H + + GLD DV+V L+
Sbjct: 748 ALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVHVEVIKYGLDCDVYVNNNLVN 807
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
Y SCK I DA KVFDE M E+ V+SW
Sbjct: 808 FYGSCKKILDACKVFDE---------------------------------MPERTVVSWN 834
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I + + EAI F +M+ +PD M+ L CA++G + LG WIH+ + +
Sbjct: 835 AVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIER 894
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL L AL+DMYAKSG +G A VF+ MK K+V TW+ MI GLA HG +E L++F
Sbjct: 895 GLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQHGFAKEGLELF 954
Query: 300 SRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
M R+ + PN +TF+ +L AC H GLV G RYF+ M YGI+P + YG M+D+LG
Sbjct: 955 LDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILG 1014
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE----LGECALQHLIKLEPHNSG 414
RAG L+EA + +MPF+ + +W +LL+A +I+ DV+ + + L++LEP SG
Sbjct: 1015 RAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIH-DVKDSTGVAYKVRKRLLELEPRRSG 1073
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
N+ +++N+YA G W ++ K+R+VMRD G+KK G S +E+S +H F +G S D +
Sbjct: 1074 NFVMVANMYADAGMWEKAAKVRRVMRDGGLKKKAGESCVELSGSIHRFFSGYDSQDDKEG 1133
Query: 475 LYQILCKINGQMK 487
+YQ+L +N M+
Sbjct: 1134 MYQLLDGLNLHMQ 1146
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 136/297 (45%), Gaps = 33/297 (11%)
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
S+I+ +IH Q +GL D +V LI+ F LS
Sbjct: 675 SSIKHLYQIHSQIQVSGLQGDTFLVTQLIK--------------FSSLS----------- 709
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
DL+ A+++ + + W LI GYA + P +A+ ++R M+ E ++P+
Sbjct: 710 ------PSKDLSYAQSILDHSVHPVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPN 763
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ L ACA A + G+ +H + +YGL+ V +NN L++ Y KI A +VF+
Sbjct: 764 SLTFPFLLKACAACFATKEGKQVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFD 823
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M ++V++W +I EA+ F +M +P+ T + +L C +G + L
Sbjct: 824 EMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGL 883
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
GR + + R G+ + ++D+ ++G + A+ + RM E N W +++
Sbjct: 884 GRWIHSQVIER-GLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMK-EKNVWTWSAMI 938
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 252/388 (64%), Gaps = 4/388 (1%)
Query: 103 VGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+G SD + +AL+ YA K + +ARKVFDEL+ R + AV+N +++ YAK G +++
Sbjct: 114 LGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCR--DTAVYNALLSAYAKGGLVDS 171
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACA 221
A LFE M ++NV+SWT +++GYAQ + EA+ F M + V+P+E+ + + L ACA
Sbjct: 172 AEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACA 231
Query: 222 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWT 280
+GA+ELG + Y GL V + NAL++MY+K G I +A QVF+ + + + + +W
Sbjct: 232 AVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWN 291
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
+MI A+HGL REAL +F ++ A VKP+ ITF+ ++ AC H GLV G+ +F+ M++
Sbjct: 292 SMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAE 351
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 400
+ ++P+IE YGCM+DLLGRAG L E+ L+ MP E +A IWG+LL A + +G+VEL E
Sbjct: 352 FSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAEL 411
Query: 401 ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVH 460
A+ LI LEP N+ N ILSNIYA G+W+ ++ K++++ KK G S+IE+ +H
Sbjct: 412 AMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELDGTMH 471
Query: 461 EFVAGDTSHPDFDRLYQILCKINGQMKF 488
+F+ D SHP F+ +Y L + MK
Sbjct: 472 KFLVEDKSHPRFEEVYNTLNSVTMTMKL 499
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/450 (38%), Positives = 251/450 (55%), Gaps = 35/450 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F DV +N I +T A+ L+ ++ +RPD ++ VL A
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH 208
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+IELGR++H G DS++ +V ALI +Y+ C + A +F LS + +V WN
Sbjct: 209 SGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYK--DVISWN 266
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
T++ GY M+ EA+ LF+ M P
Sbjct: 267 TLIG-------------------------------GYTHMNLYKEALLLFQEMLRSGETP 295
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALIDMYAKSGKIGKALQ 266
+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LIDMYAK G I A Q
Sbjct: 296 NDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 355
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF +M +KS+ +W MI G A+HG + D+FSRM + ++P++ITF+ +LSAC H G+
Sbjct: 356 VFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGM 415
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++LGR F M Y + PK+E YGCMIDLLG +G +EAE+++ M E + IW SLL
Sbjct: 416 LDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 475
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A ++G+VEL E Q+LIK+EP N +Y +LSNIYA GRW + +IR ++ +KK
Sbjct: 476 KACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKK 535
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+PGCS IEV V EFV GD HP +Y
Sbjct: 536 VPGCSSIEVDSVVFEFVVGDKFHPQNREIY 565
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 225/396 (56%), Gaps = 6/396 (1%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA S+F +P+ ++NT I+ + +P++++ LY + + L P++Y+FPF+LK+
Sbjct: 16 YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA 75
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
K T G++IH Q + G D D++V +LI MY + DA KVFD S R +V +
Sbjct: 76 KSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHR--DVVSY 133
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ GYA GD+ +A+ LF+ + K+V+SW +I+GYA+ EA+ LF M NV+
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PDE + LSACA G++ELG +H++++ +G ++ + + NALID+Y+K G++ A +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ + K VI+W T+I G L +EAL +F M R+ PN++T +++L AC H+G +
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313
Query: 328 ELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++GR + I K G+ +ID+ + G ++ A ++ M + + W +++
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMI 372
Query: 387 AASNIYG--DVELGECALQHLIKLEPHNSGNYAILS 420
++G D + I +EP + +LS
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLS 408
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 270/483 (55%), Gaps = 10/483 (2%)
Query: 11 HLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
HL + + + ++LG D+A +F + + +A + A+ ++ + A
Sbjct: 46 HLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVAD 105
Query: 71 ALRPDNYSFPFVLKAVVKLSTIEL----GREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ PDN + L A + G+ IH V +G+ DV V LI++Y
Sbjct: 106 GVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGE 165
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ +R+VFD++ R + WN M+ YA+ G ++ A +F M ++V+SW T++AGY
Sbjct: 166 LPVSRRVFDDMPSR--STITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYC 223
Query: 187 QMDQPNEAITLFRRMQVEN---VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
+ EA+ LFR+M + V P+ M L ACA G +E G W+H YIE+ +N
Sbjct: 224 VAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMND 283
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRM 302
L+ LIDMY K G I ALQVFE + K + +WTT+I GLA+HG +AL MF M
Sbjct: 284 DGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMM 343
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ + P+++T + +L+AC H GLV+ G YF M++++ I PKIE YGCMIDLLGR G
Sbjct: 344 QDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGR 403
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA ++R MP + N IWG+ L+A ++G++ELG+ A + L +L+P + +LS++
Sbjct: 404 LQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSM 463
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA W + R+ M M VKK PGCS IE+ VHEFVAG + HP + + +L +
Sbjct: 464 YAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDV 523
Query: 483 NGQ 485
Q
Sbjct: 524 EAQ 526
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 254/434 (58%), Gaps = 3/434 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + DV+ + I + A+ L++ ++ D V+
Sbjct: 214 GMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVV 273
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A +L G H GL S ++V ALI MY+S + AR++FD S + +
Sbjct: 274 AACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD--SGQCLD 331
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN+M+AGY K G + +A+ LF +M +K+ +SWTT+I+G Q DQ +EA+T+F MQ
Sbjct: 332 QFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQA 391
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ +KPDE+ +++ +SAC + ++E G+ +H YI ++ V L +LIDMY K G +
Sbjct: 392 QGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLES 451
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV-KPNEITFIAILSACC 322
AL+VF+ M+ + W +I GLA++GL ++LDMFS ME + PNEITF +LSAC
Sbjct: 452 ALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACR 511
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVE G+ +F +M+ +Y I P I YGCM+DLLGRAGY++EAE L+ MP + W
Sbjct: 512 HAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAW 571
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL + +GD E+GE + L+ L+PH+ G + +LSNIYA G W +R M+
Sbjct: 572 GALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQW 631
Query: 443 GVKKMPGCSYIEVS 456
V K+PG S +E S
Sbjct: 632 HVPKIPGSSVVESS 645
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 197/421 (46%), Gaps = 71/421 (16%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P+ + N +KA + P + LY + A+ PD Y+ + A IE GR+
Sbjct: 68 RPNAFSCNMVLKAAREHGLPHLCLPLYASMSAA---PDCYTHTILAAACATRRAIEEGRQ 124
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+HC V G ++++ AL+ MY++C C+ DARKVFD + VW+ WNT++A Y +
Sbjct: 125 VHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFD--AGPVWDAVSWNTILAAYVQA 182
Query: 158 GDLNNA-------------------------------RALFELMTEKNVISWTTLIAGYA 186
D++ A R +F+++ K+V +WT +I+ +
Sbjct: 183 EDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQ 242
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ + EA+ LF M+ E DE M+ ++ACA+L GE H + GL + +
Sbjct: 243 RNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLN 302
Query: 247 LNNALIDMYA-------------------------------KSGKIGKALQVFENMKNKS 275
+ NALI MY+ K+G + A ++F M +K
Sbjct: 303 VQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKD 362
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
++WTTMI+G + EAL +F+ M+ +KP+E+T ++++SAC ++ +E G+
Sbjct: 363 NVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHE 422
Query: 336 -IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
I + +Y I + +ID+ + G L+ A ++ M E W +++ + G
Sbjct: 423 YIREHQYTITVILGTS--LIDMYMKCGCLESALEVFDTME-ERGTPCWNAVIVGLAMNGL 479
Query: 395 V 395
V
Sbjct: 480 V 480
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 285/531 (53%), Gaps = 70/531 (13%)
Query: 26 SDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
+ Y++ +F+H P+++LYNT I + L+ I+ L ++FP VLKA
Sbjct: 61 THYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKA 120
Query: 86 VVKLSTIELGREIHCQTV-------------------GTGLDSDVHVVAA---------- 116
+ S +LG ++H V G+G +D H V
Sbjct: 121 CTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTW 180
Query: 117 ----------------------------------LIQMYASCKCIYDAR------KVFDE 136
++Q+ ++C + D K +E
Sbjct: 181 TALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEE 240
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ ++ N V T+V YAK G + AR++F+ M EK++++W+T+I GYA P E I
Sbjct: 241 MEMQK-NSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
F +M EN+KPD+ +++ LS+CA LGA++LGEW + I+++ T + + NALIDMYA
Sbjct: 300 FFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G + + +VF+ MK K ++ I+GLA +G + + +F + E+ + P+ TF+
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L C H GL++ G R+FN + Y ++ +E YGCM+DL GRAG L +A +L+ MP
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
NA +WG+LL+ + D +L E L+ LI LEP N+GNY LSNIY++ GRW+E+ ++R
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVR 539
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+M G+KK+PG S+IE+ VHEF+A D SHP D++Y L + +M+
Sbjct: 540 DMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 252/388 (64%), Gaps = 4/388 (1%)
Query: 103 VGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+G SD + +AL+ YA K + +ARKVFDEL+ R + AV+N +++ YAK G +++
Sbjct: 114 LGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCR--DTAVYNALLSAYAKGGLVDS 171
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACA 221
A LFE M ++NV+SWT +++GYAQ + EA+ F M + V+P+E+ + + L ACA
Sbjct: 172 AEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACA 231
Query: 222 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWT 280
+GA+ELG + Y GL V + NAL++MY+K G I +A QVF+ + + + + +W
Sbjct: 232 AVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWN 291
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
+MI A+HGL REAL +F ++ A VKP+ ITF+ ++ AC H GLV G+ +F+ M++
Sbjct: 292 SMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAE 351
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 400
+ ++P+IE YGCM+DLLGRAG L E+ L+ MP E +A IWG+LL A + +G+VEL E
Sbjct: 352 FSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAEL 411
Query: 401 ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVH 460
A+ LI LEP N+ N ILSNIYA G+W+ ++ K++++ KK G S+IE+ +H
Sbjct: 412 AMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELDGTMH 471
Query: 461 EFVAGDTSHPDFDRLYQILCKINGQMKF 488
+F+ D SHP F+ +Y L + MK
Sbjct: 472 KFLVEDKSHPRFEEVYNTLNSVTMTMKL 499
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 283/506 (55%), Gaps = 45/506 (8%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+IV ++ LL++ I +CS+ + Y + +F PD +L+N+ IK+ + PL+
Sbjct: 32 LIVTSYGRSRSLLTKLITLACSARAIA-YTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLH 90
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V Y ++ +S + P NY+F V+K+ LS +++G+ +HC V +G D +V AAL+
Sbjct: 91 CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVT 150
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
Y+ C GD+ AR +F+ M EK+V++W
Sbjct: 151 FYSKC---------------------------------GDMEAARQVFDRMPEKSVVAWN 177
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+L++G+ Q +AI +F +M+ +PD ++ LSACAQ GA+ LG W+H YI
Sbjct: 178 SLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSE 237
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL+ V L ALI++Y++ G +GKA +VF+ MK +V WT MI+ HG G++A+D+F
Sbjct: 238 GLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLF 297
Query: 300 SRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
++ME PN +TF+A+LSAC H GLVE GR + M Y + P +E + C++D+LG
Sbjct: 298 NKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLG 357
Query: 359 RAGYLQEAEKLLRRMPFEANA---AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
RAG+L EA + ++++ NA A+W ++L A ++ + +LG + LI LEP N G+
Sbjct: 358 RAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGH 417
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+ +LSNIYA+ G+ +E IR M ++K G S IEV + + F GD SH + +
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEI 477
Query: 476 YQIL------CKINGQMKFAEHLQNE 495
Y+ L CK G +E + ++
Sbjct: 478 YRYLETLISRCKEIGYAPVSEEVMHQ 503
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/481 (36%), Positives = 271/481 (56%), Gaps = 35/481 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I RGLD++ H+ I + G A +F S+ D+ +N+ I + + A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ ++ + +P+ S VL A +L ++LG + V + + + +ALI M
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C GDL +AR +F+ M +K+ ++W
Sbjct: 273 YGKC---------------------------------GDLVSARRIFDSMKKKDKVTWNA 299
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GYAQ EAI LF+ M++ + PD+I ++ LSACA +GA++LG+ + Y + G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
V + AL+DMYAK G + A +VF M K+ ++W MI+ LA HG +EAL +F
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFK 419
Query: 301 RM--ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
M E V PN+ITF+ +LSAC H GLV+ GRR F++M S +G+ PKIE Y CM+DL
Sbjct: 420 SMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG+L+EA + MP + + I G+LL A ++++ E ++ L++LEP NSGNY I
Sbjct: 480 RAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVI 539
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
S +YA L RW++S ++R +M+ GV K PGCS+I+++ ++HEF AGD H ++ ++QI
Sbjct: 540 SSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQI 599
Query: 479 L 479
L
Sbjct: 600 L 600
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 196/373 (52%), Gaps = 38/373 (10%)
Query: 27 DYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLN-AVILYNKIQASALRPDNYSFPFVL 83
D+AY+ F++ P Y +N I+ L N + A+ Y++++ L+P+N ++PF+
Sbjct: 75 DFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLF 134
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A L +E GR HC + GLD D HV +LI MYA C + DARKVFDE+S + +
Sbjct: 135 IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK--D 192
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN+M++GY+K M EA+ LFR M
Sbjct: 193 LVSWNSMISGYSK-------------------------------MRHAGEAVGLFREMME 221
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+P+E+++++ L AC +LG ++LG W+ ++ + + + +ALI MY K G +
Sbjct: 222 AGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVS 281
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A ++F++MK K +TW MI G A +G+ EA+ +F M + P++IT I ILSAC
Sbjct: 282 ARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACAS 341
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
+G ++LG++ I S G + + ++D+ + G L A ++ MP + N W
Sbjct: 342 IGALDLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMP-KKNEVSWN 399
Query: 384 SLLAASNIYGDVE 396
++++A +G +
Sbjct: 400 AMISALAFHGQAQ 412
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 11/246 (4%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENV 206
N+ + A + D A F + + S+ +I G + ++ + A+ + RM+ +
Sbjct: 64 NSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGL 123
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KP+ + AC+ L AVE G H + + GL+ ++++LI MYA+ GK+G A +
Sbjct: 124 KPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARK 183
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ + K +++W +MI+G + EA+ +F M A +PNE++ +++L AC +G
Sbjct: 184 VFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGD 243
Query: 327 VELGRRYFNIMKSRYGIEPKIE----QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
++LG + +E K+ +I + G+ G L A ++ M + + W
Sbjct: 244 LKLG-----TWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK-KKDKVTW 297
Query: 383 GSLLAA 388
+++
Sbjct: 298 NAMITG 303
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 256/420 (60%), Gaps = 4/420 (0%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQASALRPDNYSFPFVLKA 85
D A +F + DV + T + + A L+ + + +RP+ + + A
Sbjct: 195 DDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSA 254
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ ++ + G +H G+ V++ AL+ M+ C C+ AR+VFD + ++ +V
Sbjct: 255 IGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVK--DVY 312
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
W +MV YAK GDL +A LF+ M +NV+SW+ +IA Y+Q++QP EA+ LFR M
Sbjct: 313 SWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAG 372
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
V P + +++ LSACAQLG ++LG WI+ NYI + V L NALIDM+AK G +G+A
Sbjct: 373 VDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEA 432
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F+ M ++V++W TMI A+HG EA+ +F +++ + P++ITF+ +L++C H
Sbjct: 433 SKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHS 492
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV GRRYF M+ Y IEP++E Y CMIDLLG+ G L+EA ++ R MP EA+ A WG+
Sbjct: 493 GLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGA 552
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A ++G+VE+G C L++L+P +SG Y ++S IYA +W++ +R MRD G
Sbjct: 553 LLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGT 612
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 75/398 (18%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKL------STI 92
P+ Y+ T ++ + P A+ L+ ++ L D +F F +KA T
Sbjct: 99 PNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTP 158
Query: 93 ELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVA 152
G IHC A+ KC + V V N +V
Sbjct: 159 SGGEAIHC---------------------AALKCGFVGESVL-----------VGNALVH 186
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEI 211
YA L++A +F+ M E++V+SWTTL+ GYA+ +EA LF RM V ++P+ +
Sbjct: 187 FYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAV 246
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM----------------- 254
++AA+SA Q+G + G +H Y+ + G+ V L+NAL+DM
Sbjct: 247 TLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGM 306
Query: 255 --------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
YAK G + A Q+F++M ++V++W+ MIA + EA+ +F
Sbjct: 307 EVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFR 366
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFN--IMKSRYGIEPKIEQYGCMIDLLG 358
M A V P + T +++LSAC +G ++LGR + I+ ++ G+ + +ID+
Sbjct: 367 EMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGL--TVNLGNALIDMFA 424
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G + EA KL M E N W +++ A ++G E
Sbjct: 425 KCGDVGEASKLFDEMA-ERNVVSWNTMIMAHAVHGQSE 461
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 270/483 (55%), Gaps = 10/483 (2%)
Query: 11 HLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
HL + + + ++LG D+A +F + + +A + A+ ++ + A
Sbjct: 46 HLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVAD 105
Query: 71 ALRPDNYSFPFVLKAVVKLSTIEL----GREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ PDN + L A + G+ IH V +G+ DV V LI++Y
Sbjct: 106 GVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGE 165
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ +R+VFD++ R + WN M+ YA+ G ++ A +F M ++V+SW T++AGY
Sbjct: 166 LPVSRRVFDDMPSR--STITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYC 223
Query: 187 QMDQPNEAITLFRRMQVEN---VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
+ EA+ LFR+M + V P+ M L ACA G +E G W+H YIE+ +N
Sbjct: 224 VAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMND 283
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRM 302
L+ LIDMY K G I ALQVFE + K + +WTT+I GLA+HG +AL MF M
Sbjct: 284 DGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMM 343
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ + P+++T + +L+AC H GLV+ G YF M++++ I PKIE YGCMIDLLGR G
Sbjct: 344 QDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGR 403
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA ++R MP + N IWG+ L+A ++G++ELG+ A + L +L+P + +LS++
Sbjct: 404 LQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSM 463
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
YA W + R+ M M VKK PGCS IE+ VHEFVAG + HP + + +L +
Sbjct: 464 YAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDV 523
Query: 483 NGQ 485
Q
Sbjct: 524 EAQ 526
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 275/452 (60%), Gaps = 7/452 (1%)
Query: 40 DVYLYNTTI-KALCQTDNPLNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGRE 97
DV + +TI +A Q D A L + + +A P++ + VL A + L R
Sbjct: 31 DVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLARP 90
Query: 98 IHCQTVGTGL---DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY 154
+ L S + + L + Y + + + A ++FD + +R +V +NTMV+G
Sbjct: 91 LALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVR--SVVTYNTMVSGL 148
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
+ G ++ A +F+ M + +SWT LI G+ + + +EAI FR M +++V+PD + ++
Sbjct: 149 MRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLI 208
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
A +SACA++GA+ LG W+H + + GL V + N+LIDMYA+ G++ A QVF +++ +
Sbjct: 209 AVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKR 268
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+V++W +MI GLA +GL EA+++F M R KP+ +T +L+AC H GL E G RY+
Sbjct: 269 TVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYY 328
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
++M + YGI ++E YGC++DLLGRAG L EA ++ MP N + G+LLA ++GD
Sbjct: 329 DLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHGD 388
Query: 395 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
+++ E +QHL +L+P NY +LSNIYA +G+W+ +GK+R +M+ GVKK PG S +E
Sbjct: 389 LDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSIVE 448
Query: 455 VSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
+ VHEFV+ D SHP + + Q+L + +M
Sbjct: 449 IDGDVHEFVSSDRSHPQAEEIGQMLGLLRHEM 480
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N ++S + + G D A+ +F PD + I + A
Sbjct: 133 MPVRSVVTYNTMVSGLMRN----GLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEA 188
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ + + ++ PD + V+ A ++ + LG +H + GL+ +V V +LI M
Sbjct: 189 IDCFRAMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDM 248
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A +VF S+R V WN+M+ G A G L T
Sbjct: 249 YARCGQVKLAAQVFH--SIRKRTVVSWNSMIVGLAANG----------LCT--------- 287
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQY 239
EAI LF M+ + KPD + + L+AC+ G E G ++ + +Y
Sbjct: 288 ------------EAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEY 335
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
G+ + ++D+ ++G++ +A+ V E M + + + ++AG +HG
Sbjct: 336 GIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHG 387
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 276/488 (56%), Gaps = 10/488 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR N ++S + G D A S+F + + + +N I Q A
Sbjct: 224 MKVRSESSWNAMVSLYTHQ----GRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMA 279
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +++ + AS++ PD ++ VL A L +++G+++H + TG+ ++ ALI
Sbjct: 280 LKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALIS 339
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA + AR++ D+ + NV + ++ GY K+GD AR +F++M ++VI+WT
Sbjct: 340 TYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWT 399
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q Q +EA+ LFR M +P+ + A LSACA L + G+ IH +
Sbjct: 400 AMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRS 459
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDM 298
V ++NA+I +YA+SG + A +VF+ + K +TWT+MI LA HGLG +A+ +
Sbjct: 460 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVL 519
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M R VKP+ +T+I + SAC H G ++ G+RY+ M + +GI P++ Y CM+DLL
Sbjct: 520 FEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLA 579
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG L EA + ++RMP + +WGSLLAA + + +L E A + L+ ++P NSG Y+
Sbjct: 580 RAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSA 639
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+Y+ GRWN++ +I K+ +D VKK G S+ V +VH F A D HP D
Sbjct: 640 LANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRD----A 695
Query: 479 LCKINGQM 486
+CK +M
Sbjct: 696 ICKKAAEM 703
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 200/427 (46%), Gaps = 44/427 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N LLS + S G A +F + D + + L + +AV + +
Sbjct: 101 NSLLSMYAKS----GRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVG 156
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
L P + VL + +GR++H + GL S V V +++ MY C
Sbjct: 157 EGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAET 216
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR VF+ + +R + + WN MV+ Y G ++ A ++FE M E++++SW +IAGY Q
Sbjct: 217 ARAVFERMKVR--SESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG 274
Query: 190 QPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+ A+ F RM +++PDE + + LSACA L +++G+ +H+YI + G+ +
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334
Query: 249 NALIDMYAKSG------------------------------KIG---KALQVFENMKNKS 275
NALI YAKSG K+G +A +VF+ M N+
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
VI WT MI G +G EA+++F M R+ +PN T A+LSAC + + G++ +
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQ-IH 453
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
R E + +I + R+G + A ++ ++ + W S++ A +G
Sbjct: 454 CRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG-- 511
Query: 396 ELGECAL 402
LGE A+
Sbjct: 512 -LGEQAI 517
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 162/314 (51%), Gaps = 37/314 (11%)
Query: 95 GREIHCQTVGTGLDSDVHVVAALIQMYASCK----CIYDARKVFDELSLRVWNVAVWNTM 150
GR IH V GL ++ L+ YA C ++AR++FD++ N WN++
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++ YAK G L +AR +F M E++ +SWT ++ G + + +A+ F M E + P +
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------- 257
+ LS+CA A +G +H+++ + GL++ VP+ N+++ MY K
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 258 ------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G++ AL +FENM+ +S+++W +IAG +GL AL F
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFF 283
Query: 300 SRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
SRM A ++P+E T ++LSAC ++ ++++G++ + + R G+ + +I
Sbjct: 284 SRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYIL-RTGMPYSSQIMNALISTYA 342
Query: 359 RAGYLQEAEKLLRR 372
++G ++ A +++ +
Sbjct: 343 KSGSVETARRIMDK 356
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 278/508 (54%), Gaps = 66/508 (12%)
Query: 41 VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHC 100
+L NT ++A P AV +++ + D++++ F++KA+ L R +H
Sbjct: 89 TFLPNTLLRAYALNALPREAVAVFSAMP----HRDSFTYSFLIKALSSAGVAPL-RAVHS 143
Query: 101 QTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---VWNVAV----------- 146
V G D +V ALI Y+ DA KVF+E+ R WN A+
Sbjct: 144 HVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEG 203
Query: 147 ---------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY------ 185
WNT++ GY K GD+ A LF+ M E+NV+SW+T+++GY
Sbjct: 204 ARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDM 263
Query: 186 -------------------------AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
AQ EA LF +M+ +V+ D A+++ L+AC
Sbjct: 264 EMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAAC 323
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN-MKNKSVITW 279
A+ G++ LG+ IH Y+ L + NALIDM+ K G I +A VF+ + K ++W
Sbjct: 324 AESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSW 383
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
T+I G A+HG G +ALD F++M+ P+ +T I +LSAC H+G VE GRRYF M+
Sbjct: 384 NTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMER 443
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
YG+ P+IE YGCMIDLLGR G ++EA L++ MP++ N IWGSLL+A ++ +VE E
Sbjct: 444 DYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAE 503
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
A+ L KL+P N+GNYA+LS+IYA G+W++ K R M+ G +K G S+IE+ +
Sbjct: 504 IAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIELDEAF 563
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMK 487
HEF GD HPD D++ +++ +++ K
Sbjct: 564 HEFTVGDRKHPDSDQISEMVDRLSSHAK 591
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 34/268 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A IF ++ + + A Q A L+ +++ +++ D + +L
Sbjct: 261 GDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSIL 320
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + ++ LG+ IH L HV ALI M+ C CI A VFD + +
Sbjct: 321 AACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDS 380
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V+ WNT++ G+A G ++A+ F +M++
Sbjct: 381 VS-WNTIIGGFAMHG-------------------------------HGDKALDFFAQMKL 408
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ PD + M+ LSAC +G VE G + N YG+ + +ID+ + G I
Sbjct: 409 QGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIK 468
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALH 289
+A+ + ++M + + + W ++++ LH
Sbjct: 469 EAVDLIKSMPWDPNEVIWGSLLSACRLH 496
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 133/329 (40%), Gaps = 62/329 (18%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISW--TTLIAGYAQMDQPNEAITLFRRMQVEN 205
+ +++ YA L +R +F + ++ TL+ YA P EA+ +F M
Sbjct: 60 SKLLSSYALHRRLPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSAMP--- 116
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
D + A + G L +H+++ + G + NALID Y+K+G A
Sbjct: 117 -HRDSFTYSFLIKALSSAGVAPL-RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDAS 174
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
+VFE M + V++W + +A + G
Sbjct: 175 KVFEEMPRRDVVSWNSAMAAMVRQ-----------------------------------G 199
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
VE RR F+ M +E + ++D +AG ++EA KL + MP E N W ++
Sbjct: 200 EVEGARRMFDEM-----LEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMP-ERNVVSWSTV 253
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
++ GD+E+ K+ N + I+ + A G E+GK+ M++ V+
Sbjct: 254 VSGYCKKGDMEMARVIFD---KMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVE 310
Query: 446 K--------MPGCS---YIEVSKRVHEFV 463
+ C+ + + KR+H +V
Sbjct: 311 LDVAAVVSILAACAESGSLALGKRIHRYV 339
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 272/495 (54%), Gaps = 44/495 (8%)
Query: 5 GLDQN---NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GLD + NH L C +GF A +F D+ +N+ I + A+
Sbjct: 158 GLDGDEYVNHSLITMYARCGEMGF---ARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAI 214
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ +++ PD + VL A L + LGR + + ++ + ++ +ALI MY
Sbjct: 215 GLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMY 274
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C GDL +AR +F+ M K+V++W +
Sbjct: 275 GKC---------------------------------GDLISARRVFDSMPNKDVVTWNAI 301
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I GYAQ NEAI LF M+ PD + M+ LSAC+ +GA++LG+W+ + + GL
Sbjct: 302 ITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGL 361
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V + +ALIDMYAK G + A++VFE+M +K+ ++W MI+ LA HG +EAL +F R
Sbjct: 362 QHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRR 421
Query: 302 MER--ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + V+PN+ITFI +LSAC H GLV+ GR+ F M +G+ PK+E Y CM+DL R
Sbjct: 422 MSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCAR 481
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L EA L+++MP + + + GSLL A + ++GE +Q +++E NSGNY I
Sbjct: 482 AGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVIS 541
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
S IYA + RW++S K+R +MR GV K PGCS+I++ VHEF AGD+ H +YQ+L
Sbjct: 542 SKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLL 601
Query: 480 CKINGQMKFAEHLQN 494
N +MK ++ N
Sbjct: 602 ---NEEMKREGYIPN 613
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 207/399 (51%), Gaps = 44/399 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPL 58
M++ + + N LLS+ ID D AY+ +F +KP++Y +N ++ L T
Sbjct: 56 MLINSIPKPNFLLSKIID------LKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKY 109
Query: 59 N-AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+ V LY K+++ L+ +N+++PF+ A + + G+ HC GLD D +V +L
Sbjct: 110 DFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSL 169
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MYA C + ARKVFDE+ R ++ WN+M++GY+K+G
Sbjct: 170 ITMYARCGEMGFARKVFDEMGDR--DLVSWNSMISGYSKMG------------------- 208
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
EAI LF M+ E +PDE+ +++ L AC LG + LG W+ ++
Sbjct: 209 ------------FTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVL 256
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ + + +ALIDMY K G + A +VF++M NK V+TW +I G A +G EA+
Sbjct: 257 EKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIV 316
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F+ M A P+ +T I +LSAC +G ++LG ++ S G++ + +ID+
Sbjct: 317 LFNGMREAGPHPDRVTMIEVLSACSTIGALDLG-KWVETHASEKGLQHDVYVASALIDMY 375
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G L +A ++ MP + N W ++++A +G +
Sbjct: 376 AKCGSLDDAVRVFESMPHK-NEVSWNAMISALAFHGQAQ 413
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+ ++ N+++ S ID G A +F DV +N I Q A++L
Sbjct: 258 KKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVL 317
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+N ++ + PD + VL A + ++LG+ + GL DV+V +ALI MYA
Sbjct: 318 FNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAK 377
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + DA +VF+ + + N WN M++ A G
Sbjct: 378 CGSLDDAVRVFESMPHK--NEVSWNAMISALAFHG------------------------- 410
Query: 184 GYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYG 240
Q EA++LFRRM +N V+P++I + LSAC G V+ G + + +G
Sbjct: 411 ------QAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFG 464
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
L V + ++D+ A++G + +A + + M K
Sbjct: 465 LVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGK 498
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 272/465 (58%), Gaps = 9/465 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + ++ +N+ I Q A+ L+ ++ PD + V+ A
Sbjct: 201 AQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAG 260
Query: 89 LSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L+ GR++H + V + D+ + AL+ MYA C ++A+ VFD +++R +V
Sbjct: 261 LAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIR--SVVSE 318
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+M+ GYAK ++ +A+A+F M EKNV++W LIA YA + EA+ LF R++ E+V
Sbjct: 319 TSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVW 378
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL------NTIVPLNNALIDMYAKSGKI 261
P L+ACA L ++LG+ H ++ + G + V + N+L+DMY K+G I
Sbjct: 379 PTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSI 438
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+VFE M + ++W MI G A +G ++AL +F RM + +P+ +T I +LSAC
Sbjct: 439 SDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSAC 498
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV+ GRRYF M +GI P + Y CMIDLLGRAG+L+E E+L+ MP E +A +
Sbjct: 499 GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVL 558
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W SLL A ++ ++++GE A L +L+P NSG Y +LSN+YA LG+W + ++R+ M+
Sbjct: 559 WASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKH 618
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GV K PGCS+IE+ ++V+ F+A D HP + ++ L I QM
Sbjct: 619 RGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQM 663
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 182/416 (43%), Gaps = 71/416 (17%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N + + +C+ LG +D A ++F PD YN + AL Q +A+ +
Sbjct: 79 RNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAM 138
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
A + YSF L A G ++H + SDV++ AL+ MYA C+
Sbjct: 139 HADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERP 198
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
+A+KVFD + R N+ WN+++ Y + G +
Sbjct: 199 EEAQKVFDAMPER--NIVSWNSLITCYEQNGPV--------------------------- 229
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVP 246
+EA+ LF RM + PDE+ + + +SACA L A G +H ++ +
Sbjct: 230 ----DEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV 285
Query: 247 LNNALIDMYAKSGK-------------------------------IGKALQVFENMKNKS 275
LNNAL+DMYAK G+ +G A VF M K+
Sbjct: 286 LNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKN 345
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YF 334
V+ W +IA A + EAL +F R++R V P T+ +L+AC ++ ++LG++ +
Sbjct: 346 VVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHV 405
Query: 335 NIMKSRY----GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+++K + G E + ++D+ + G + + K+ RM N + W +++
Sbjct: 406 HVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVS-WNAMI 460
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 131/257 (50%), Gaps = 2/257 (0%)
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ YA ++DAR+VFD + R N +N +++ A++G ++A ALF + + +
Sbjct: 56 LLSAYARLGSLHDARRVFDGMPHR--NTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
S+ ++A AQ + +A+ M ++ + + +ALSACA A GE +H +
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ + V + AL+DMYAK + +A +VF+ M +++++W ++I +G EAL
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+F RM + P+E+T +++SAC + GR+ M + ++D+
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDM 293
Query: 357 LGRAGYLQEAEKLLRRM 373
+ G EA+ + RM
Sbjct: 294 YAKCGRTWEAKCVFDRM 310
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/481 (36%), Positives = 275/481 (57%), Gaps = 9/481 (1%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S +D + + + A +F + ++ +N+ I Q A++L+ + +
Sbjct: 931 SALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFV 990
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARK 132
PD + V+ A L+ GR++H + V + D+ + AL+ MYA C AR
Sbjct: 991 PDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARC 1050
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD ++ R +V +++ GYA+ ++ +A+ +F M EKNVI+W LIA YAQ +
Sbjct: 1051 VFDRMASR--SVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEE 1108
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ------YGLNTIVP 246
EA+ LF R++ E+V P L+AC + ++LG+ H ++ + +G + V
Sbjct: 1109 EALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVF 1168
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+L+DMY K+G I +VFE M + ++W MI G A +G ++AL +F RM ++
Sbjct: 1169 VGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSK 1228
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
P+ +T I +LSAC H GLVE GRRYF M +GI P + Y CMIDLLGRAG+L+E
Sbjct: 1229 ESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEV 1288
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
E+L++ M E +A +W SLL + ++ +VE+GE A L +L+P NSG Y +LSN+YA L
Sbjct: 1289 EELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAEL 1348
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
G+W + ++R M+ GV K PGCS+IE+ ++V F+A D HP + ++ IL I QM
Sbjct: 1349 GKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQM 1408
Query: 487 K 487
Sbjct: 1409 S 1409
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 183/382 (47%), Gaps = 33/382 (8%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + ++ +N + ++ + A++L+ +++ D + VL A
Sbjct: 337 AKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTG 396
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ I G E+H + G S + AL++MY+ C C+ A ++
Sbjct: 397 ILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLL-------------- 442
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
LFE+ +E++ SW +LI+GY + A+ +MQ E V P
Sbjct: 443 -----------------LFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTP 484
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++ +AL+ACA + ++ G IH Y+ + G L + LIDMY K + ++++F
Sbjct: 485 NQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIF 544
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E ++ VI W +MI G A G G LD+F M++ +K + +TF+ L +C G V
Sbjct: 545 EARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVR 604
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
LGR YF +M I P+IE Y CMI+LLG+ G + E E + MPFE A+W +
Sbjct: 605 LGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDC 663
Query: 389 SNIYGDVELGECALQHLIKLEP 410
YG+ +LGE A + + P
Sbjct: 664 CREYGNRKLGERAAKCINDSNP 685
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 175/401 (43%), Gaps = 71/401 (17%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
LG A ++F PD YN I AL Q +A++ + A + YSF
Sbjct: 839 LGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASA 898
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L A G ++H + DV++ +AL+ MYA C+ +AR+VF+ + R
Sbjct: 899 LSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPER-- 956
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
N+ WN+++ Y + G + EA+ LF M
Sbjct: 957 NIVSWNSLITCYEQNGPV-------------------------------GEALVLFVSMM 985
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQYGLNTIVPLNNALIDMYAKSGKI 261
PDE+ + + +SACA L A G +H ++ + L+NAL+DMYAK G+
Sbjct: 986 KAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRT 1045
Query: 262 GKALQVFENMKNKSVIT-------------------------------WTTMIAGLALHG 290
A VF+ M ++SV++ W +IA A +G
Sbjct: 1046 RAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNG 1105
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKS--RYGIEPKI 347
EAL +F R++R V P T+ +L+AC +V ++LG++ + +++K R+ P+
Sbjct: 1106 EEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPES 1165
Query: 348 EQY--GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ + ++D+ + G + + K+ RM N + W +++
Sbjct: 1166 DVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMI 1205
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 191/449 (42%), Gaps = 77/449 (17%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L +R I+S ++ G A +F D +N I A + +P A+ L++ + +
Sbjct: 87 LFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLG 146
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
+RP + + VL + + R++H S+V + AL+ +Y +C + DAR
Sbjct: 147 IRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADAR 206
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
+ FD++ E N ISW ++ Y
Sbjct: 207 RAFDDI---------------------------------LEPNAISWNVIVRRYHLAGMG 233
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+ A+ +F RM V+P + A+ AC A+E G IH ++ ++G V + +++
Sbjct: 234 DMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSV 293
Query: 252 IDMYAK-------------------------------SGKIGKALQVFENMKNKSVITWT 280
+DMYAK G+I A +VFE MK +++++W
Sbjct: 294 VDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWN 353
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR----RYFNI 336
M+ G AL +F +M + + + IT ++LSAC G++++G+ F I
Sbjct: 354 AMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSAC--TGILDIGKGEEVHAFAI 411
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR-RMPFEANAAIWGSLLAASNIYGDV 395
K + P ++ ++ + + G L+ AE+LL M E ++ W SL++ Y
Sbjct: 412 -KCGFFSSPILKN--ALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISG---YERH 465
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYA 424
+ E AL L K++ + N + S+ A
Sbjct: 466 SMSEAALYALTKMQSEVTPNQSTFSSALA 494
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 136/266 (51%), Gaps = 4/266 (1%)
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
++ ++ L+ YA + DAR+VFDE+ N +N +++ +A++G +ARALF
Sbjct: 793 AETFLLNTLVSAYARLGRLPDARRVFDEIPHP--NTFSYNALLSAHARLGRPADARALFH 850
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
+ + + S+ +IA AQ + +A+ M ++ + + +ALSACA
Sbjct: 851 AIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRT 910
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
G +H + + V + +AL+DMYAK +A +VFE M +++++W ++I
Sbjct: 911 GVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQ 970
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKI 347
+G EAL +F M +A P+E+T +++SAC + GR+ + ++KS E +
Sbjct: 971 NGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMV 1030
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRM 373
++D+ + G + A + RM
Sbjct: 1031 LS-NALVDMYAKCGRTRAARCVFDRM 1055
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 87/470 (18%), Positives = 167/470 (35%), Gaps = 82/470 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDS-CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
MI +G + ++ L S ID C F DY+ IF + DV L+N+ I +
Sbjct: 512 MIRKGYEIDDILRSVLIDMYCKCRQF-DYSIRIFEARPSRDVILWNSMIFGCAYSGKGEY 570
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ L++++Q ++ D+ +F L + + + LGR + + + +I+
Sbjct: 571 GLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIE 630
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+ C+ + + + A+W + + G+ + + + N ++
Sbjct: 631 LLGKHGCMVELEDFVEHMPFEP-TTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPV 689
Query: 180 TLIA--GYAQMDQPNEAITLFRRMQVENVK--PDEIAMLAALSACAQLGAVELGEW---- 231
+A Y D EA + + E + P + A+ S A L L W
Sbjct: 690 QFVATVDYESNDGGREAESTSFSSEGEGCEELPFSLEGEASGSLPAPLTTRPLAIWYGMA 749
Query: 232 ---IHNYIEQYGLNTIVPLNN-------------------------------ALIDMYAK 257
H+++ L PL + L+ YA+
Sbjct: 750 RHHHHHFVSH--LRASAPLADLLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYAR 807
Query: 258 SGKIGKALQVFENMKNKSVITWTTM-------------------------------IAGL 286
G++ A +VF+ + + + ++ + IA L
Sbjct: 808 LGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAAL 867
Query: 287 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEP 345
A H G +AL + M N +F + LSAC G + ++ KS + +
Sbjct: 868 AQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDV 927
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
I ++D+ + + +EA ++ MP E N W SL+ G V
Sbjct: 928 YIGS--ALLDMYAKCEWPEEARRVFEAMP-ERNIVSWNSLITCYEQNGPV 974
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 271/470 (57%), Gaps = 7/470 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +R L N+++S ++ S G A +F + DV +NT + Q N A
Sbjct: 108 MHLRNLYSWNNMVSGYVKS----GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y + + S ++ + +SF +L A VK ++L R+ H Q + G S+V + ++I
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A++ FDE++++ ++ +W T+++GYAK+GD+ A LF M EKN +SWT
Sbjct: 224 YAKCGQMESAKRCFDEMTVK--DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LIAGY + N A+ LFR+M VKP++ + L A A + ++ G+ IH Y+ +
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMF 299
+ + ++LIDMY+KSG + + +VF +K + W TMI+ LA HGLG +AL M
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + RV+PN T + IL+AC H GLVE G R+F M ++GI P E Y C+IDLLGR
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG +E + + MPFE + IW ++L I+G+ ELG+ A LIKL+P +S Y +L
Sbjct: 462 AGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILL 521
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
S+IYA G+W K+R VM+ V K S+IE+ K+V F D SH
Sbjct: 522 SSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 176/367 (47%), Gaps = 43/367 (11%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
+++ G+ IH TG +++ LI MY C DA KVFD++ LR N+ WN
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR--NLYSWNN 118
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
MV+GY K G L AR +F+ M E++V+SW T++ GYAQ +EA+ ++ + +K +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E + L+AC + ++L H + G + V L+ ++ID YAK G++ A + F+
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 270 NMKNKSV-------------------------------ITWTTMIAGLALHGLGREALDM 298
M K + ++WT +IAG G G ALD+
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M VKP + TF + L A + + G+ M R + P +ID+
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAIVISSLIDMYS 357
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL-----IKLEPHNS 413
++G L+ +E++ R + + W ++++A +G LG AL+ L +++P+ +
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNRT 414
Query: 414 GNYAILS 420
IL+
Sbjct: 415 TLVVILN 421
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 133/301 (44%), Gaps = 43/301 (14%)
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+ ++ +A + ++A++ + + ++ + + L C +++ G+WIH +++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 240 GL---NTIVPLNNALIDMYAKSGK-------------------------------IGKAL 265
G NT+ L+N LI MY K GK + +A
Sbjct: 76 GFKRPNTL--LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRAR 133
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VF++M + V++W TM+ G A G EAL + R+ +K NE +F +L+AC
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 326 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
++L R+ + ++ + G + +ID + G ++ A++ M + + IW +
Sbjct: 194 QLQLNRQAHGQVLVA--GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTT 250
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
L++ GD+E E + ++ N ++ L Y G N + + + M +GV
Sbjct: 251 LISGYAKLGDMEAAE---KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 445 K 445
K
Sbjct: 308 K 308
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 259/449 (57%), Gaps = 6/449 (1%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQT 102
++N I + + A L+ ++ + D ++F VL A G+ +H Q
Sbjct: 261 VWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQI 320
Query: 103 VGTGL----DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
++ + V AL+ +Y+ C I AR++FD + + +V WNT+++GY +
Sbjct: 321 TRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK--DVVSWNTILSGYVESS 378
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
L+ A +FE M KN +SW +++GY +A+ LF RM+ E+VKP + A+S
Sbjct: 379 CLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAIS 438
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
AC +LG+++ G+ +H ++ Q G NALI MYA+ G + +A +F M N ++
Sbjct: 439 ACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVS 498
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W MI+ L HG GREAL++F RM + P+ I+F+ +L+AC H GLV+ G +YF MK
Sbjct: 499 WNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMK 558
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+GI P + Y +IDLLGRAG + EA L++ MPFE +IW ++L+ GD+ELG
Sbjct: 559 RDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELG 618
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
A L K+ P + G Y +LSN Y+ GRW ++ ++RK+MRD GVKK PGCS+IE +
Sbjct: 619 AHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNK 678
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMK 487
VH FV GDT HP+ ++Y+ L + +M+
Sbjct: 679 VHVFVVGDTKHPEAHKVYKFLEMVGARMR 707
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 219/462 (47%), Gaps = 59/462 (12%)
Query: 36 KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS-ALRPDNYSFPFVLKAVVKLSTIEL 94
+++ D L+N I A + + AV ++ + AS +LRPD+YSF +L A L I +
Sbjct: 116 QARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISV 175
Query: 95 GR--EIHCQTVGTGLDSDVHVVAALIQMYASCKCI---YDARKVFDELSLRVWNVAVWNT 149
++ C + +G + V AL+ +Y C+ + DARKV DE+ + + W T
Sbjct: 176 RHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDK--DALTWTT 233
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
MV GY + GD+ AR++FE + K + W +I+GY EA LFRRM +E V D
Sbjct: 234 MVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLD 293
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIGKAL 265
E + LSACA G G+ +H I + N + +P+NNAL+ +Y+K G I A
Sbjct: 294 EFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVAR 353
Query: 266 QVFENMKNKSVITWTT-------------------------------MIAGLALHGLGRE 294
++F+NMK+K V++W T M++G G +
Sbjct: 354 RIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSED 413
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
AL +F+RM VKP + T+ +SAC +G ++ G++ + + G E +I
Sbjct: 414 ALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHL-VQLGFEGSNSAGNALI 472
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
+ R G ++EA + MP ++ W ++++A +G G AL+ ++ G
Sbjct: 473 TMYARCGAVKEANLMFLVMP-NIDSVSWNAMISALGQHGH---GREALELFDRMV--AEG 526
Query: 415 NYAILSNIYAILGRWNESGKI-------RKVMRDMGVKKMPG 449
Y + +L N SG + + RD G+ +PG
Sbjct: 527 IYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGI--IPG 566
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 149/354 (42%), Gaps = 32/354 (9%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+L+ YA+ + A FD + + + N +++ YA+ A A+F +
Sbjct: 93 SLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGS 152
Query: 176 I-----SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL----GAV 226
+ S+T L++ + PN ++ ++Q +K +L+ +A L A+
Sbjct: 153 LRPDDYSFTALLSAAGHL--PNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210
Query: 227 ELGEWIHNYIEQYGLNTIVPLNNAL-----IDMYAKSGKIGKALQVFENMKNKSVITWTT 281
E +++ +P +AL + Y + G +G A VFE + K + W
Sbjct: 211 EATRDARKVLDE------MPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNA 264
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY---FNIMK 338
MI+G G+ EA ++F RM RV +E TF ++LSAC + G G+ ++
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+ E + ++ L + G + A ++ M + W ++L+ Y +
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMK-SKDVVSWNTILSG---YVESSCL 380
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 452
+ A++ ++ N ++ ++ + Y G ++ K+ MR VK C Y
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKP---CDY 431
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 247/381 (64%), Gaps = 6/381 (1%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A++ YA +A ++FDE+ N WN M++ Y +VGDL++AR LF M +NV
Sbjct: 141 AMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNV 200
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
++W ++IAGYAQ Q AI LF+ M + + PDE+ M++ +SAC LGA+ELG W+
Sbjct: 201 VTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVR 260
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
++ + + + +NA+I MY++ G + A +VF+ M + V+++ T+I+G A HG G E
Sbjct: 261 FLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVE 320
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+++ S M+ ++P+ +TFI +L+AC H GL+E GR+ F +K +P I+ Y CM+
Sbjct: 321 AINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMV 375
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGR G L++A++ + RMP E +A ++GSLL AS I+ VELGE A L +LEP NSG
Sbjct: 376 DLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSG 435
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
N+ +LSNIYA GRW + +IR+ M+ GVKK G S++E ++H+F+ D SH D
Sbjct: 436 NFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDD 495
Query: 475 LYQILCKINGQMKFAEHLQNE 495
+YQ+L ++ +M+ A ++ ++
Sbjct: 496 IYQLLIELRKKMREAGYIADK 516
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 160/328 (48%), Gaps = 60/328 (18%)
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V++Y ++Q +RPD + +P ++K+ T +G H +G G SD V A+I M
Sbjct: 15 VLMYEQMQGCGVRPDAFVYPILIKSA---GTGGIGFHAHVLKLGHG--SDAFVRNAVIDM 69
Query: 121 YASCKCIYDA--------------RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARAL 166
YA ++A + +FD + R NV W MV GYAKV DL AR
Sbjct: 70 YARKVADWNAMVSGYWKWESEGQAQWLFDVMPER--NVITWTAMVTGYAKVKDLEAARRY 127
Query: 167 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV 226
F+ M E++V+SW +++GYAQ EA+ LF M LGA
Sbjct: 128 FDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM---------------------LGAY 166
Query: 227 ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 286
N++ NA+I Y + G + A ++F M ++V+TW +MIAG
Sbjct: 167 R--------------NSVTW--NAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGY 210
Query: 287 ALHGLGREALDMFSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
A +G A+++F M A ++ P+E+T ++++SAC H+G +ELG + I+
Sbjct: 211 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ-IKL 269
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
I + MI + R G +++A+++ + M
Sbjct: 270 SISGHNAMIFMYSRCGSMEDAKRVFQEM 297
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 2 IVRGLDQNNHLLS-----RFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
+VR L +N LS I S G + A +F + DV YNT I +
Sbjct: 258 VVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGH 317
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ A+ L + ++ + PD +F VL A +E GR++ +D A
Sbjct: 318 GVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDH----YAC 373
Query: 117 LIQMYASCKCIYDARKVFDELSL 139
++ + + DA++ + + +
Sbjct: 374 MVDLLGRVGELEDAKRTMERMPM 396
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 268/425 (63%), Gaps = 11/425 (2%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL-DSDVHVVAALIQMYASCKCIYDARK 132
P + +FPF+ +A +L+T L R +H Q + GL D+HV +L+ MYA+C AR+
Sbjct: 60 PSHLTFPFLARAAARLATPRLARAVHAQPLRRGLLPHDLHVSNSLVHMYAACALPGLARR 119
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FDE+ N WN ++ GYAK DL AR +F M +++V+SW+ +I G + +
Sbjct: 120 LFDEIPRP--NHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHR 177
Query: 193 EAITLFRRMQV-----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
EA+ +F M+ + V+ +++ M++ L ACA LG + G +H Y+E++G + L
Sbjct: 178 EALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRL 237
Query: 248 NNALIDMYAKSGKIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+L+DMYAK G I +AL+VF+ ++N V+ W +I GLA+HG+ RE+L MF +ME A
Sbjct: 238 ATSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHA 297
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
V P+EIT++++LSAC H GLV+ +F ++++ G+ P +E Y C++D+LGRAG L+E
Sbjct: 298 GVVPDEITYLSLLSACVHGGLVDEAWSFFRSLEAQ-GLRPHVEHYACLVDVLGRAGRLEE 356
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A +++ MP + + ++ G+LL A +++G VELGE + L+ L+P + G Y LSNIYA+
Sbjct: 357 AYGVVKSMPMKPSVSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAV 416
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
RW E+ K RKVM + GVKK+PG S I+V + + F+A D +HP +Y +L I
Sbjct: 417 ARRWQEAKKARKVMEERGVKKVPGFSEIDVGRGICRFIAQDKTHPGSAEIYALLKLIAMD 476
Query: 486 MKFAE 490
MK +
Sbjct: 477 MKMKD 481
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 268/443 (60%), Gaps = 5/443 (1%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C LGF A +F D+ +NT I Q + + L++ + A+ ++ D +
Sbjct: 164 CGQLGF---AQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTM 220
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
++ A L E + L+ DV++ LI MY A+ VFD +
Sbjct: 221 VKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRE 280
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
R N+ WN +V G+AKVG+L AR LF+ M +++VISWT++I GY+Q Q ++A+ LF+
Sbjct: 281 R--NIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQ 338
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M VKPD++ + + LSACA LG +++G +H+YI ++G+ + + N+LIDMY K G
Sbjct: 339 EMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCG 398
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ KAL+VF MK+K ++WT++I+GLA++G ALD+FS+M R V+P TF+ IL
Sbjct: 399 MVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILL 458
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLV G YF M+S +G+ P ++ YGC++DLL R+G + +A + +++MP +
Sbjct: 459 ACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDV 518
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+W LL+A ++G+V L E A + L++L+P +SGNY +LSN YA + RW+++ K+R++M
Sbjct: 519 VVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELM 578
Query: 440 RDMGVKKMPGCSYIEVSKRVHEF 462
D V+K G S IEV V +
Sbjct: 579 EDSDVQKPSGSSSIEVDGMVSNY 601
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 195/396 (49%), Gaps = 66/396 (16%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F P + ++N I+ L Q+D+P+ A+ +Y ++ + +N + F+ KA +
Sbjct: 69 AHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACAR 128
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+S I GR+IH + G +S + V ALI MYA C
Sbjct: 129 VSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMC------------------------ 164
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G L A+ +F+ M +++++SW TLI GY+Q ++ E + LF M N+K
Sbjct: 165 ---------GQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKA 215
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY------------- 255
D + M+ + AC+ LG E + + YI++ L V L N LIDMY
Sbjct: 216 DAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVF 275
Query: 256 ------------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
AK G + A ++F+NM + VI+WT+MI G + +A+
Sbjct: 276 DRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVK 335
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M A+VKP+++T ++LSAC H+G +++G + ++ R+G++ I +ID+
Sbjct: 336 LFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIR-RHGVQADIYVGNSLIDMY 394
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ G +++A ++ RM + ++ W S+++ + G
Sbjct: 395 CKCGMVEKALEVFHRMK-DKDSVSWTSVISGLAVNG 429
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 122/237 (51%), Gaps = 2/237 (0%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+L+ A +F + ++ W +I G +Q D P EAI ++ RM + + + + ++
Sbjct: 65 NLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFK 124
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
ACA++ + G IH + + G + + ++NALI MYA G++G A ++F+ M ++ +++
Sbjct: 125 ACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVS 184
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W T+I G + + +E L +F M A +K + +T + I+ AC H+G E +K
Sbjct: 185 WNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIK 244
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+E + +ID+ GR + A+ + RM E N W +L+ G++
Sbjct: 245 EN-NLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMR-ERNIVSWNALVMGHAKVGNL 299
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYA-KSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+H ++ + L+T L + +I Y+ S + KA VF ++ +++ W MI GL+
Sbjct: 36 LHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSD 95
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EA+ M++RM + N +T I + AC V + GR+ ++ + G E +
Sbjct: 96 HPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRK-IHVHALKLGFESYLFVS 154
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+I + G L A+K+ M + + W +L+ + Y
Sbjct: 155 NALIHMYAMCGQLGFAQKMFDGM-LDRDLVSWNTLICGYSQY 195
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 272/460 (59%), Gaps = 7/460 (1%)
Query: 25 FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
F +A IF + S ++++YN+ I+ + +P A++ Y + L +NY+FP ++K
Sbjct: 61 FFSHACLIFQNLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIK 120
Query: 85 AVVKL--STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
A L S+ +G +H V G D D VV+ALI+ Y+ + AR +FD + R
Sbjct: 121 ACTTLGSSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNR-- 178
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V +W M+ GY K+GD+ +AR LFE M E+N ISW+ ++A Y+++ E + LFRRMQ
Sbjct: 179 DVVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQ 238
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
P+E +++ L+ACA LGA+ G W+H+Y +Q ++ L AL+DMY+K G +
Sbjct: 239 EAGTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVE 298
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
AL F+ + NK W MI+G+A++G ++L++F++M +P E TF+A+L+AC
Sbjct: 299 SALSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACT 358
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANA 379
H LV+ G + F M S YG+EP++E Y C++DL+ RAG L EAEK + +A
Sbjct: 359 HARLVKEGLKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDA 418
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+WG++L A YG++E+G + L + + G + + N+Y G E+ ++R+++
Sbjct: 419 NVWGAMLGACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLI 478
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ G+KK PGCS IEV V EF+AGD SH ++ + L
Sbjct: 479 SEAGMKKKPGCSIIEVDGTVEEFLAGDLSHSQAPQICKTL 518
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 141/370 (38%), Gaps = 74/370 (20%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + ID +G ++A +F + + ++ + A + + + L+ ++Q +
Sbjct: 182 LWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAG 241
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
P+ VL A L + G +H DS+ + AL+ MY+ C C+ A
Sbjct: 242 TMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESAL 301
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
F + + + WN M++G A GD +W +L
Sbjct: 302 STFQGIPNK--DAGAWNAMISGVAMNGD-----------------AWKSL---------- 332
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNA 250
LF +M +P E +A L+AC V+ G + YG+ +
Sbjct: 333 ----ELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYGVEPQLEHYAC 388
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
L+D+ A++G + +A + E + GLGR +++
Sbjct: 389 LVDLMARAGMLAEAEKFIEE----------------KMGGLGRGDANVWG---------- 422
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI---DLLGRAGYLQEAE 367
A+L AC G +E+G R + + + + G + +L AG+ EA+
Sbjct: 423 -----AMLGACRTYGNIEVGNRVWKKLA-----DMGVADCGTHVLSYNLYREAGWDMEAK 472
Query: 368 KLLRRMPFEA 377
+ +RR+ EA
Sbjct: 473 R-VRRLISEA 481
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 285/499 (57%), Gaps = 2/499 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ + +++ +D G A IF + ++ +YNT + + + +++
Sbjct: 261 GMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVIL 320
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ RPD + + A +L + +G+ H + GL+ ++ A+I MY C
Sbjct: 321 DEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKC 380
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
A KVF+ + + V WN+++AG + GD+ A +F+ M E++++SW T+I
Sbjct: 381 GKREAACKVFEHMPNK--TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGA 438
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Q+ EAI LFR MQ + + D + M+ SAC LGA++L +W+ YIE+ ++
Sbjct: 439 LVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVD 498
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ L AL+DM+++ G A+ VF+ M+ + V WT I +A+ G A+++F+ M
Sbjct: 499 LQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLE 558
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+VKP+++ F+A+L+AC H G V+ GR+ F M+ +GI P I YGCM+DLLGRAG L+
Sbjct: 559 QKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLE 618
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA L++ MP E N +WGSLLAA + +VEL A + L +L P G + +LSNIYA
Sbjct: 619 EAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYA 678
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
G+W + ++R M++ GV+K+PG S IEV +HEF +GD SH + + +L +IN
Sbjct: 679 SAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINC 738
Query: 485 QMKFAEHLQNEFSGVLESD 503
++ A ++ + + +L+ D
Sbjct: 739 RLSEAGYVPDTTNVLLDVD 757
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 185/373 (49%), Gaps = 37/373 (9%)
Query: 27 DYAYSIFTHK--SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
DYA + F + +++YN I+ A++LY ++ + PD Y+FPF+L
Sbjct: 79 DYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLS 138
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A K+ + G ++H + GL+ D+ V +LI Y
Sbjct: 139 ACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFY----------------------- 175
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
A+ G ++ R LF+ M E+NV+SWT+LI GY+ D EA++LF +M
Sbjct: 176 ----------AECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEA 225
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
V+P+ + M+ +SACA+L +ELG+ + +YI + G+ + NAL+DMY K G I A
Sbjct: 226 GVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAA 285
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
Q+F+ NK+++ + T+++ H + L + M + +P+++T ++ ++AC +
Sbjct: 286 RQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQL 345
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G + +G+ + R G+E +ID+ + G + A K+ MP W S
Sbjct: 346 GDLSVGKSSHAYVL-RNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP-NKTVVTWNS 403
Query: 385 LLAASNIYGDVEL 397
L+A GD+EL
Sbjct: 404 LIAGLVRDGDMEL 416
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 193/437 (44%), Gaps = 68/437 (15%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + + + I + G D +F + +V + + I D AV L+
Sbjct: 160 GLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLF 219
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + + P+ + V+ A KL +ELG+++ G++ +V AL+ MY C
Sbjct: 220 FQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKC 279
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I AR++FDE + KN++ + T+++
Sbjct: 280 GDICAARQIFDECA---------------------------------NKNLVMYNTIMSN 306
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + ++ + + M + +PD++ ML+ ++ACAQLG + +G+ H Y+ + GL
Sbjct: 307 YVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGW 366
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------- 290
++NA+IDMY K GK A +VFE+M NK+V+TW ++IAGL G
Sbjct: 367 DNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLE 426
Query: 291 -----------------LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+ EA+++F M+ + + +T + I SAC ++G ++L +
Sbjct: 427 RDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWV 486
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASN 390
++ + I ++ ++D+ R G A + +RM A A G + N
Sbjct: 487 CTYIE-KNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGN 545
Query: 391 IYGDVELGECALQHLIK 407
G +EL L+ +K
Sbjct: 546 TEGAIELFNEMLEQKVK 562
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 148 NTMVAGYAKVGDLNN---ARALF--ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
N ++A ++G L + AR F + ++ + LI GYA ++AI L+ +M
Sbjct: 63 NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
V + PD+ LSAC+++ A+ G +H + + GL + ++N+LI YA+ GK+
Sbjct: 123 VMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVD 182
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
++F+ M ++V++WT++I G + L +EA+ +F +M A V+PN +T + ++SAC
Sbjct: 183 LGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACA 242
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+ +ELG++ + + S G+E ++D+ + G + A ++
Sbjct: 243 KLKDLELGKKVCSYI-SELGMELSTIMVNALVDMYMKCGDICAARQIF 289
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 264/463 (57%), Gaps = 6/463 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F ++N I Q+ +A L+ ++ + + D ++F VL A
Sbjct: 251 ARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN 310
Query: 89 LSTIELGREIHCQTVGTGL----DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
G+ +H Q + ++ + V AL+ +Y+ I A+++FD ++L+ +V
Sbjct: 311 AGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK--DV 368
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
WNT+++GY G L+ A +F++M KN +SW +++GY +A+ LF +M+ E
Sbjct: 369 VSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 428
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+VKP + A++AC +LGA++ G +H ++ Q G NAL+ MYAK G + A
Sbjct: 429 DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDA 488
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
VF M N ++W MI+ L HG GREAL++F +M + P+ I+F+ IL+AC H
Sbjct: 489 RLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHA 548
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV+ G YF MK +GI P + Y +IDLLGR+G + EA L++ MPFE +IW +
Sbjct: 549 GLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEA 608
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
+L+ GD+E G A L ++ P + G Y +LSN Y+ GRW ++ ++RK+MRD GV
Sbjct: 609 ILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGV 668
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
KK PGCS+IEV ++H F+ GDT HP+ +YQ L I +M+
Sbjct: 669 KKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 711
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 192/363 (52%), Gaps = 20/363 (5%)
Query: 37 SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS-ALRPDNYSFPFVLKAVVKLSTIELG 95
++ D L+N + A + AV +++ + S +LRPD+YSF ++ AV ++ +
Sbjct: 121 ARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAP 180
Query: 96 R--EIHCQTVGTGLDSDVHVVAALIQMYASC---KCIYDARKVFDELSLRVWNVAVWNTM 150
++HC + +G + + V ALI +Y C + +DARKV DE+ + + W TM
Sbjct: 181 HCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDK--DDLTWTTM 238
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V GY + GD+N AR++FE + K + W +I+GY Q +A LFRRM E V DE
Sbjct: 239 VVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDE 298
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIGKALQ 266
+ LSACA G G+ +H I + N + +P+NNAL+ +Y+K GKI A +
Sbjct: 299 FTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKR 358
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F+ M K V++W T+++G G +A+++F M N+++++ ++S H GL
Sbjct: 359 IFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGL 414
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANAAIWG 383
E + FN M++ ++P Y I G G L+ +L L + FEA+ +
Sbjct: 415 SEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGN 473
Query: 384 SLL 386
+LL
Sbjct: 474 ALL 476
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 262/459 (57%), Gaps = 34/459 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F SK +V +N I A Q + NA+ + + ++P++ +F +L
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ELG+ +H + GL+SD+HV AL+ M+ +C
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC------------------------ 562
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
GDL +A+ LF M +++++SW T+IAG+ Q + A F+ MQ +KP
Sbjct: 563 ---------GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D+I L+ACA A+ G +H I + + V + LI MY K G I A QVF
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ K+V +WT+MIAG A HG G+EAL++F +M++ VKP+ ITF+ LSAC H GL+E
Sbjct: 674 HKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIE 733
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G +F MK + IEP++E YGCM+DL GRAG L EA + + +M E ++ +WG+LL A
Sbjct: 734 EGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
++ +VEL E A Q ++L+P+++G + ILSNIYA G W E K+RKVM D GV K P
Sbjct: 793 CQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKP 852
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G S+IEV +VH F + D +HP + ++ L +++ +M+
Sbjct: 853 GQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR 891
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 221/432 (51%), Gaps = 43/432 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ + + + I+ + G + A IF + DVY +N + Q A L+
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ +++PD +F +L A ++ GRE++ + G D+D+ V ALI M+ C
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
GD+ +A +F+ + +++++WT++I G
Sbjct: 260 ---------------------------------GDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
A+ + +A LF+RM+ E V+PD++A ++ L AC A+E G+ +H +++ G +T
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + A++ MY K G + AL+VF+ +K ++V++WT MIAG A HG EA F++M
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ ++PN +TF++IL AC ++ G++ + I+++ YG + ++ ++ + + G L
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRT--ALLSMYAKCGSL 464
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAIL-- 419
++A ++ ++ + N W +++ A + + Q L+K ++P++S +IL
Sbjct: 465 KDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 420 --SNIYAILGRW 429
S+ LG+W
Sbjct: 524 CKSSDSLELGKW 535
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 182/389 (46%), Gaps = 35/389 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D ++ + + + G + A +F +V + I Q A + +
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
NK+ S + P+ +F +L A S ++ G++I + G SD V AL+ MYA C
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G L +A +FE ++++NV++W +I
Sbjct: 462 ---------------------------------GSLKDAHRVFEKISKQNVVAWNAMITA 488
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y Q +Q + A+ F+ + E +KP+ + L+ C ++ELG+W+H I + GL +
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ ++NAL+ M+ G + A +F +M + +++W T+IAG HG + A D F M+
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ +KP++ITF +L+AC + GRR ++ + + + +I + + G ++
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALI-TEAAFDCDVLVGTGLISMYTKCGSIE 667
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+A ++ ++P + N W S++A +G
Sbjct: 668 DAHQVFHKLP-KKNVYSWTSMIAGYAQHG 695
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 174/309 (56%), Gaps = 6/309 (1%)
Query: 115 AALIQMYASCKCIYDARKVFDEL--SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
+AL+Q+ K + D ++++ + S ++ + NT++ YAK G+ +A+ +F+ M E
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMRE 173
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
K+V SW L+ GY Q EA L +M ++VKPD+ ++ L+ACA V+ G +
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGREL 233
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
+N I + G +T + + ALI+M+ K G IG A +VF+N+ + ++TWT+MI GLA HG
Sbjct: 234 YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRF 293
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
++A ++F RME V+P+++ F+++L AC H +E G++ MK G + +I
Sbjct: 294 KQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE-VGWDTEIYVGTA 352
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 410
++ + + G +++A ++ + N W +++A +G ++ +I+ +EP
Sbjct: 353 ILSMYTKCGSMEDALEVFDLVKGR-NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 411 HNSGNYAIL 419
+ +IL
Sbjct: 412 NRVTFMSIL 420
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 36/316 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + H+ + + + G A ++F K D+ +NT I Q A +
Sbjct: 544 GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF 603
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q S ++PD +F +L A + GR +H D DV V LI MY C
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKC 663
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G + +A +F + +KNV SWT++IAG
Sbjct: 664 ---------------------------------GSIEDAHQVFHKLPKKNVYSWTSMIAG 690
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ + EA+ LF +MQ E VKPD I + ALSACA G +E G ++++ +
Sbjct: 691 YAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPR 750
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ ++D++ ++G + +A++ M+ W ++ +H L E + ++ +
Sbjct: 751 MEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVH-LNVELAEKAAQ-K 808
Query: 304 RARVKPNEITFIAILS 319
+ + PN+ ILS
Sbjct: 809 KLELDPNDNGVFVILS 824
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 2/204 (0%)
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
Q NEA+ + R+ +++ A L C + + GE I+N+I++ G+ + + N
Sbjct: 90 QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRN 149
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
LI+MYAK G A Q+F++M+ K V +W ++ G HGL EA + +M + VKP
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++ TF+++L+AC V+ GR +N++ + G + + +I++ + G + +A K+
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLI-LKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 370 LRRMPFEANAAIWGSLLAASNIYG 393
+P + W S++ +G
Sbjct: 269 FDNLPTR-DLVTWTSMITGLARHG 291
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 273/460 (59%), Gaps = 22/460 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR N +L ++ S G D A +F + DV+ + I Q A
Sbjct: 254 MPVRNTVSWNVMLKGYVKS----GLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKA 309
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++LY+ ++ S L P+ +L A + +IE GR+ H V G + A +I
Sbjct: 310 LLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISF 369
Query: 121 YASCKCI---YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
YA+C+ I Y ++ D+ L NV M+ G+ K G ++ AR +F++M EK+V S
Sbjct: 370 YAACRRIDLAYLQYQMSDKSHLTSSNV-----MIVGFTKNGMIDQARQIFDMMPEKDVFS 424
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+T+I+GYAQ + P+ A+ LF M V+P+EI M++ SA A LG + G W H Y+
Sbjct: 425 WSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYV- 483
Query: 238 QYGLNTIVPLNN----ALIDMYAKSGKIGKALQVFENMKNKS--VITWTTMIAGLALHGL 291
N ++PLN+ A+IDMYAK G I AL VF +K+K+ V W +I GLA+HG
Sbjct: 484 ---CNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+L++FS ++R +K N ITF+ +LSACCH GLVE+G RYF MK+++G+EP I+ YG
Sbjct: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
C++DLLGR G L+EAE+++R MP +A+ IWG+LLA+S +G+VE+GE A ++L +L+P
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 660
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+ +LSN+YA G W ++ +R+ ++ + + PG S
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYS 700
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 191/401 (47%), Gaps = 35/401 (8%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + Y T I L Q D A+ ++ ++++ + P+ + V+ A
Sbjct: 146 ARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSH 205
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ I R +H + V + L+ MY + D +++F+E+ +R N WN
Sbjct: 206 IGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVR--NTVSWN 263
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
M+ GY K G ++ AR LFE + E++V SW +I G+ QM + +A+ L+ M+ ++ P
Sbjct: 264 VMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHP 323
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-------NTIVPL-------------- 247
+E+ ++ LSAC Q ++E G H+ I + G TI+
Sbjct: 324 NEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQY 383
Query: 248 ----------NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+N +I + K+G I +A Q+F+ M K V +W+TMI+G A + L ALD
Sbjct: 384 QMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALD 443
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M ++V+PNEIT +++ SA +G + GR + ++ I +ID+
Sbjct: 444 LFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKV-IPLNDNLSAAIIDMY 502
Query: 358 GRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYGDVEL 397
+ G + A + R++ + + + W +++ ++G L
Sbjct: 503 AKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANL 543
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 210/473 (44%), Gaps = 78/473 (16%)
Query: 39 PDVYL-YNTTIKALCQTDNPL-NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR 96
P +YL + +T + + PL N N +S+ S LK S I G+
Sbjct: 22 PPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQ 81
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
+IH + G +S+ ++ +LI MY C + AR +FD S V + N M++GY K
Sbjct: 82 QIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCS--VLDSVSCNIMMSGYVK 139
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
+ L NAR LF M E+ +S+TT+I G AQ D EAI +F+ M+ V P+E+ M +
Sbjct: 140 LRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASV 199
Query: 217 LSACAQLGAVELGEWIHNYIEQ---YGLNTI-----------------------VPLNNA 250
+SAC+ +G + +H + + +GL I +P+ N
Sbjct: 200 MSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNT 259
Query: 251 -----LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
++ Y KSG + +A ++FE + + V +W MI G R+AL ++S M ++
Sbjct: 260 VSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKS 319
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMK---------------SRYGIEPKIE-- 348
+ PNE+ + +LSAC +E GR++ +++ S Y +I+
Sbjct: 320 DLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLA 379
Query: 349 --QY-----------GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
QY MI + G + +A ++ MP E + W ++++ Y
Sbjct: 380 YLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP-EKDVFSWSTMISG---YAQN 435
Query: 396 ELGECALQHL-----IKLEPHNSGNYAILSNIYAI----LGRWNESGKIRKVM 439
EL + AL K+EP+ ++ S I A+ GRW KV+
Sbjct: 436 ELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVI 488
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 164/437 (37%), Positives = 257/437 (58%), Gaps = 3/437 (0%)
Query: 48 IKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL 107
I Q + A+ L ++ S P + SF L A + +E+GR IH + TG
Sbjct: 527 IAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGC 586
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
+ +V+ LI MYA C + D VF ++RV + WN++++G ++ L++AR +F
Sbjct: 587 QFNSYVMNGLISMYAKCGNVEDGSHVFR--TIRVKDTVSWNSLISGLSENYMLDDARVVF 644
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
E M +++V+SWT +I+ Y Q A+ LF M +KP+++ + + LSAC LGA++
Sbjct: 645 EKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIK 704
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
LGE H I + G +T + + N+LI MY K G VFE M +ITW ++ G A
Sbjct: 705 LGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCA 763
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+GLG+EA+ +F +ME + P++++F+ +L AC H GLV+ G +FN M +YGI P +
Sbjct: 764 QNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLV 823
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
Y CM+DLLGRAGYL EAE L+ MP + ++ IW +LL A I+ +VELG+ + L +
Sbjct: 824 YHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQ 883
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT 467
+ S Y +LSN++A G W++ +IRK+M+D G+ K PG S+I+V ++H FV GD
Sbjct: 884 MTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDR 943
Query: 468 SHPDFDRLYQILCKING 484
+H + +Y L + G
Sbjct: 944 THDQIEEIYSALKEYYG 960
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 208/438 (47%), Gaps = 29/438 (6%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I LG + A +F + DV +N+ I Q A +L++ +R
Sbjct: 178 IQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR--- 234
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++ +L K IE RE+ + + +V A+I Y + +ARK+FDE
Sbjct: 235 -TWTILLTGYAKEGRIEEAREV----FESMTERNVVSWNAMISGYVQNGDLKNARKLFDE 289
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ + NVA WN++V GY ++ AR LF+ M E+N +SW +I+GY + EA
Sbjct: 290 MPEK--NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWD 347
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
+F +M +PD+ + LSA L +EL + + G V + +A+++ Y
Sbjct: 348 VFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYT 407
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
++G + A+ FE M ++ +WTTMIA A G +A+ ++ R+ V T A
Sbjct: 408 RNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTA 463
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+++A VG ++ R F+ + + P + + +I + G L+EA+ L ++MP +
Sbjct: 464 MMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK 518
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG--K 434
N+A W +++A + E AL+ LI+L H SG+ S+ + L G +
Sbjct: 519 -NSASWAAMIAG---FVQNEESREALELLIEL--HRSGSVPSDSSFTSALSACANIGDVE 572
Query: 435 IRKVMRDMGVKKMPGCSY 452
I +V+ + +K GC +
Sbjct: 573 IGRVIHSLAIKT--GCQF 588
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 47/349 (13%)
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
I+L + QTV T A++ YA I AR +FDE+ NV WN ++
Sbjct: 447 IQLYERVPEQTVATK--------TAMMTAYAQVGRIQKARLIFDEILNP--NVVAWNAII 496
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
AGY + G L A+ LF+ M KN SW +IAG+ Q ++ EA+ L + P +
Sbjct: 497 AGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDS 556
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI---------- 261
+ +ALSACA +G VE+G IH+ + G + N LI MYAK G +
Sbjct: 557 SFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTI 616
Query: 262 ---------------------GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
A VFE M + V++WT +I+ G G ALD+F
Sbjct: 617 RVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFL 676
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M +KPN++T ++LSAC ++G ++LG + F+ + + G + + +I + +
Sbjct: 677 DMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKC 735
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
GY ++ + MP E + W ++L G LG+ A++ ++E
Sbjct: 736 GY-EDGFCVFEEMP-EHDLITWNAVLVGCAQNG---LGKEAIKIFEQME 779
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 47/296 (15%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F K DV + I A Q + A+ L+ + A ++P+ + +L A
Sbjct: 638 DDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSAC 697
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L I+LG + H G D+ + V +LI MY C
Sbjct: 698 GNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC---------------------- 735
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
GY + +FE M E ++I+W ++ G AQ EAI +F +M+VE +
Sbjct: 736 ------GY------EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGI 783
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIH--NYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
PD+++ L L AC+ G V+ G W H + ++YG+ +V ++D+ ++G + +A
Sbjct: 784 LPDQMSFLGVLCACSHAGLVDEG-WAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEA 842
Query: 265 LQVFENM--KNKSVITWTTMIAGLALH---GLGREALDMFSRMERARVKPNEITFI 315
+ ENM K SVI W ++ +H LG+ + +M KP T++
Sbjct: 843 EALIENMPVKPDSVI-WEALLGACRIHRNVELGQRVAERLFQM----TKPKSATYV 893
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 32/306 (10%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NT + ++G + AR +F M +++V+SW ++I GY+Q + +EA LF +N++
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 208 PDEIAMLA------------ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN------- 248
I + + + V I Y++ L L
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKN 294
Query: 249 ----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
N+++ Y ++ +A ++F+ M ++ ++W MI+G EA D+F +M R
Sbjct: 295 VASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR 354
Query: 305 ARVKPNEITFIAILSACCHVGLVEL--GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+P++ F+ +LSA + +EL R I + G E + +++ R G
Sbjct: 355 TVARPDQSIFVVVLSAITGLDDLELIGSLRPIAI---KTGYEGDVVVGSAILNAYTRNGS 411
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L A MP E N W +++AA G + + A+Q ++ +
Sbjct: 412 LDLAMHFFETMP-ERNEYSWTTMIAAFAQCGRL---DDAIQLYERVPEQTVATKTAMMTA 467
Query: 423 YAILGR 428
YA +GR
Sbjct: 468 YAQVGR 473
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 277/468 (59%), Gaps = 35/468 (7%)
Query: 40 DVYLYNTTIKALCQTDNP---LNAVILYNKIQASALRPDNYSFPFVLKAVVKLS-TIELG 95
D +L NT I+ + P A + + +A+ P+ ++FPF+LK+ L + ++G
Sbjct: 96 DAFLVNTLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVG 155
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
+ H + G +D +V LI MY SC AG+
Sbjct: 156 LQAHAAALKFGFAADHYVSNTLIHMY-SC-------------------------FGAGF- 188
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
L +AR +FE M ++ ++W+ +I GY + ++A+ LFR MQV V+PDE+ ++
Sbjct: 189 ----LGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIG 244
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L+A A LGA+EL W+ ++E+ G+ V L NALID AK G + A+ VFE M+ ++
Sbjct: 245 VLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERT 304
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V++WT++I LA+ G G+EA+ +F M+ V P+++ FI +L+AC H G+V+ GR YF+
Sbjct: 305 VVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFD 364
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
MK+ YGIEPKIE YGCM+D+ GRAG +++ + +R MP + N IW +L+AA +G +
Sbjct: 365 SMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHGRL 424
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
ELGE ++L+ P + NY +LSN+YA+ RW E +IR+ M G+KK+PGCS +E+
Sbjct: 425 ELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVEL 484
Query: 456 SKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
VHEF+AGD SHP + +Y+++ +++ +++ H+ +L+ D
Sbjct: 485 DGEVHEFIAGDESHPQYKEIYRMVEEMSRELRRIGHIAATSEVLLDLD 532
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 35/274 (12%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
SC GF A ++F + ++ I + +AV+L+ +Q S +RPD +
Sbjct: 182 SCFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVT 241
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
VL A L +EL R + G+ V + ALI A C
Sbjct: 242 VIGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKC-------------- 287
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
GD++ A A+FE M E+ V+SWT++I A + EA+ +F
Sbjct: 288 -------------------GDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVF 328
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAK 257
M+ V PD++A + L+AC+ G V+ G + + +YG+ + ++DM+ +
Sbjct: 329 EEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGR 388
Query: 258 SGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
+G + + L+ M K + I W T++A HG
Sbjct: 389 AGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHG 422
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 230/355 (64%), Gaps = 2/355 (0%)
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+F+ + R NV W+TMV+GY K GD+ AR LF+ M KN++SWT +++GYA
Sbjct: 65 LFESMPER--NVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAK 122
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
+AI F +M+ +KPD+ +++ L++CA+ G + LG+ +H IE+ V ++NAL+
Sbjct: 123 DAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALV 182
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G++ +AL VF M K +++W M+ GLA+HG G +AL +FS M + +P+++
Sbjct: 183 DMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKV 242
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T +A+L AC H G V+ G RYFN M+ YGI P IE YGCM+DLLGR G L+EA +L++
Sbjct: 243 TLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQS 302
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP E N IWG+LL A ++ V L E L L KLEP + GNY++LSNI+A G W+
Sbjct: 303 MPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSV 362
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+R M++ G++K G S IEV VHEF D SHP D++YQ++ ++ +K
Sbjct: 363 ANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDLK 417
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 130/245 (53%), Gaps = 27/245 (11%)
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL-G 224
LF++M E++V+SW ++I G ++ + +EA LF DE+ M A+S L G
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLF----------DEMPMKDAVSWNTILDG 52
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNN-----ALIDMYAKSGKIGKALQVFENMKNKSVITW 279
V+ GE + +GL +P N ++ Y K+G + A +F+ M K++++W
Sbjct: 53 YVKAGE----MNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSW 108
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMK 338
T +++G A+ GL ++A+ F +ME A +KP++ T I+IL++C GL+ LG+R + +I +
Sbjct: 109 TIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIER 168
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
RY + ++D+ + G + A + M + + W +L ++G G
Sbjct: 169 IRYKCSVNVSN--ALVDMYAKCGQVDRALSVFNGMS-KKDLVSWNCMLQGLAMHGH---G 222
Query: 399 ECALQ 403
E ALQ
Sbjct: 223 EKALQ 227
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+A+ + +++ + L+PD+ + +L + + + LG+ +H V+V AL+
Sbjct: 123 DAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALV 182
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MYA C + A VF+ +S + ++ WN M+ G A G
Sbjct: 183 DMYAKCGQVDRALSVFNGMSKK--DLVSWNCMLQGLAMHG-------------------- 220
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIE 237
+A+ LF M+ E +PD++ ++A L AC G V+ G + +N
Sbjct: 221 -----------HGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMER 269
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH---GLGR 293
YG+ + ++D+ + G++ +A ++ ++M +V+ W T++ +H GL
Sbjct: 270 DYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAE 329
Query: 294 EALDMFSRME 303
E LD ++E
Sbjct: 330 EVLDCLFKLE 339
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 173/434 (39%), Positives = 258/434 (59%), Gaps = 4/434 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F D + + I + D + A+ +++ ++ D V+
Sbjct: 217 GMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVV 276
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A K I+ G H V GL S V+V ALI MY+SC + AR++FD S +
Sbjct: 277 AACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFD--SSESLD 334
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN+M++GY K G + +A+ALF +M +K+ +SW+ +IAG Q +Q +EA+T+F M+
Sbjct: 335 HFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRA 394
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+KPDE+ +++ +SAC L A+E G+ +H YI QY N + L +LIDMY K G +
Sbjct: 395 HEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEA 454
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK-PNEITFIAILSACC 322
AL+VF+ ++ K W +I GLA++GL +LDMFS ME + + P+EITF +LSAC
Sbjct: 455 ALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACR 514
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVE GR++F +M+++Y I P I YGCM+DLLGRAGY++EAE L++ MP + W
Sbjct: 515 HGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAW 574
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL A + D E+GE + L+KL+PH+ G +LSNIYA G W +R M+
Sbjct: 575 GALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDLRGSMKQH 634
Query: 443 GVKKMPGCSYIEVS 456
V K+ GCS +E S
Sbjct: 635 -VAKVAGCSVVESS 647
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 193/430 (44%), Gaps = 69/430 (16%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
++ +F P+ + NT I+A + P LY + A+ PD Y+ P + A
Sbjct: 61 HSLQLFRLVRSPNAFTCNTLIRAALRQGLPHLCFPLYASMPAA---PDTYTHPLLAAACA 117
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
GR++H V G ++++ AL+ MY++C C+ AR+VFD + VW+ W
Sbjct: 118 ARGDAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFD--AGPVWDAVSW 175
Query: 148 NTMVAGYAKVGDLNNARALFELMTEK-------------------------------NVI 176
NT++A Y + GD+ A +F M E+ +
Sbjct: 176 NTILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAF 235
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+WT +I+ + + D EA+ +F M+ E DE M++ ++ACA+ ++ GE H +
Sbjct: 236 TWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLV 295
Query: 237 EQYGLNTIVPLNNALIDMYA-------------------------------KSGKIGKAL 265
+ GL + V + NALI MY+ K+G++ A
Sbjct: 296 VRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAK 355
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
+F M +K ++W+ MIAG + EAL +F M +KP+E+T ++++SAC ++
Sbjct: 356 ALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLC 415
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+E G+ ++ +Y I +ID+ + G ++ A ++ M E W ++
Sbjct: 416 ALEQGKLVHEYIR-QYQYNITIVLGTSLIDMYMKCGCMEAALEVF-DMVEEKGTPCWNAV 473
Query: 386 LAASNIYGDV 395
+ + G V
Sbjct: 474 IVGLAMNGLV 483
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 180/480 (37%), Positives = 279/480 (58%), Gaps = 2/480 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G A +F + + +N+ I N A +L+ K++ + PD ++F +L
Sbjct: 137 GLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLL 196
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ ++LGR +H TG+ D+ V AL+ MYA C ++ A+ +FD + N
Sbjct: 197 SVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEK--N 254
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W +M++ YA+ G + AR +F+ M KNV+SW ++I+ Y + Q EA+ LF +M+
Sbjct: 255 VVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRN 314
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V PDE +++ L+AC+QLG + +G+ IHNYI V L N+LIDMYAK G +
Sbjct: 315 SRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVT 374
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
AL +F M K++++W +I LALHG G EA+ +F M+ P+EIT +LSAC H
Sbjct: 375 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 434
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV++G YF+ M Y + +IE Y CM+DLLGR G L EA +L+ RMP + + +WG
Sbjct: 435 SGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 494
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A I+G+VE+G+ L+ L++LEPH+ G Y ++SNIY RW + KIRK+M D G
Sbjct: 495 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRG 554
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+KK S IE+ ++EF+ D H +Y +L ++ ++ A +L N S E++
Sbjct: 555 IKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYLCNISSVFFEAE 614
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 208/426 (48%), Gaps = 68/426 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I+ GL L + I C+ G YA +F +P+ ++YN+ I+ +D+P+
Sbjct: 11 IILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPI 70
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+AV+L+ ++ S L P+ ++ PFVLKA S +H + G+ S V V ALI
Sbjct: 71 DAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALI 130
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y C I+ ARK+FD+++ + + WN+M+ GYA +G+ W
Sbjct: 131 AVYVVCGLIHCARKLFDDITDK--TLVSWNSMIGGYAHMGN------------------W 170
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
EA LFR+M+ ++PD + LS C+Q ++LG ++H IE
Sbjct: 171 -------------KEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEI 217
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH--------- 289
G+ + + NAL+DMYAK G + A +F+ + K+V++WT+MI+ A H
Sbjct: 218 TGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQI 277
Query: 290 ----------------------GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
G REALD+F++M +RV P+E T ++IL+AC +G +
Sbjct: 278 FDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDL 337
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+G++ N + S G + Y +ID+ + G + A + MP + N W ++
Sbjct: 338 VMGKKIHNYILSNKG-AYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGK-NLVSWNVIIG 395
Query: 388 ASNIYG 393
A ++G
Sbjct: 396 ALALHG 401
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 146/284 (51%), Gaps = 5/284 (1%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
GDL A+ +F+ + + N + +LI GY+ D P +A+ LFRRM + P+E + L
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
AC A +H + G+ ++V + NALI +Y G I A ++F+++ +K+++
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 155
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+W +MI G A G +EA +F +M ++P+ TF+ +LS C ++LG RY +
Sbjct: 156 SWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLG-RYVHFC 214
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
G++ I ++D+ + G L A+ + R E N W S+++A +G +E+
Sbjct: 215 IEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQ-EKNVVSWTSMISAYAQHGSIEV 273
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
A Q ++ N ++ + + Y G++ E+ + MR+
Sbjct: 274 ---ARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRN 314
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 280/501 (55%), Gaps = 35/501 (6%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+G D ++ + + + G +Y ++F S DV + T I L Q AV
Sbjct: 246 KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQA 305
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ +++ S + P+ Y+F V+ L+ IE G ++H + GL + + V +++ MYA
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + + +F E++ R ++ W+T++AGY++ G ++ A FEL+ SW
Sbjct: 366 CGQLTSSSVIFHEMTRR--DIVSWSTIIAGYSQGGHVSEA---FELL------SW----- 409
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
M++E KP E A+ + LSAC + +E G+ +H Y+ GL
Sbjct: 410 -----------------MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEH 452
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ +ALI+MY K G I +A ++F+ +N +++WT MI G A HG RE +D+F ++
Sbjct: 453 TAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIP 512
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
R ++P+ +TFI +LSAC H GLV+LG RYFN M +Y I P E YGCMIDLL RAG L
Sbjct: 513 RVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRL 572
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+AE ++ MPF + +W +LL A ++GDVE G + +++LEP+ +G + L+NIY
Sbjct: 573 SDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIY 632
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A G+W E+ IRK+M+ GV K PG S+I+V V FVAGD SHP + +Y +L +
Sbjct: 633 ASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Query: 484 GQMKFAEHLQNEFSGVLESDV 504
+ + A+ +Q +G L D+
Sbjct: 693 SRTELADCVQE--TGFLPYDL 711
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 34/339 (10%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F +V + I L + A++ ++++ S + D+Y+F LKA
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ GREIH Q + G D V L MY C
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKC--------------------------- 265
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G L LFE M+ ++V+SWTT+I QM Q A+ F RM+ +V P+E
Sbjct: 266 ------GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEY 319
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
A +S CA L +E GE +H I GL + + N+++ MYAK G++ + +F M
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ +++W+T+IAG + G EA ++ S M KP E ++LSAC ++ ++E G+
Sbjct: 380 TRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 439
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+ + S G+E +I++ + G ++EA ++
Sbjct: 440 QLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 164/399 (41%), Gaps = 44/399 (11%)
Query: 6 LDQNNHLLSRF--------IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
L QN H +S+ + G A +F S+ D + T I ++
Sbjct: 37 LSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDS 96
Query: 58 LNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A++L+ ++ S LR D + KA S + G +H V TGL + V V +A
Sbjct: 97 SEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSA 156
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ MY I++ R+V F M +NV+
Sbjct: 157 LLDMYTKNGKIFEGRRV---------------------------------FHEMPMRNVV 183
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SWT +I G + EA+ F M V+ D AL ACA GA+ G IH
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ G + + N L MY K GK+ L +FE M + V++WTT+I L G A+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
F RM + V PNE TF A++S C ++ +E G + ++ G+ + ++ +
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL-HLGLAASLSVENSIMTM 362
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+ G L + + M + W +++A + G V
Sbjct: 363 YAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYSQGGHV 400
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 265/492 (53%), Gaps = 35/492 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + + + I S+ G ++ +F DV + I + D+ L A+ +
Sbjct: 133 GFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYF 192
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYAS 123
+++ S + + + VLKA K + GR IH + G + DV + ++L+ MY
Sbjct: 193 VEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGK 252
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C DA+KVFDE+ R NV W ++AGY + R
Sbjct: 253 CGCYDDAQKVFDEMPSR--NVVTWTALIAGYVQ------GRCF----------------- 287
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
+ + +F M +V P+E + + LSACA +GA+ G +H Y+ + +
Sbjct: 288 --------EKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEI 339
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ LID YAK G + +A+ VFE ++ K+V TWT MI G A HG A+D+F M
Sbjct: 340 NTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTML 399
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ V PNE+TFI +LSAC H GLVE GRR F MK R+ +EPK + Y CM+DL GR G L
Sbjct: 400 SSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLL 459
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA+ L+ RMP E A+WG+L + I+ D ELG+ A +IKL+P +SG Y +L+N+Y
Sbjct: 460 EEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLY 519
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP-DFDRLYQILCKI 482
+ W++ ++RK M+D V K PGCS+IEV ++HEF+A D P + D LY+ L +
Sbjct: 520 SESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLYKTLDNV 579
Query: 483 NGQMKFAEHLQN 494
QM+ + L++
Sbjct: 580 GVQMRLPDELED 591
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 188/408 (46%), Gaps = 43/408 (10%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNPLNAVILYNKIQA 69
LSR + C++ YA + P + L+++ + T N + + Y +++
Sbjct: 38 FLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRR 97
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ + P ++FP +LKAV KL + H + G DSD+ V +LI Y++C
Sbjct: 98 NGVVPSRHTFPPLLKAVFKLRDAN-PFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEF 156
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
+VFD +K+V+SWT +I G+ + D
Sbjct: 157 GSRVFDGTE---------------------------------DKDVVSWTAMIDGFVRND 183
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLN 248
EA+T F M+ V +E+ +++ L A + V G IH Y+E + V +
Sbjct: 184 SSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIG 243
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
++L+DMY K G A +VF+ M +++V+TWT +IAG + + +F M ++ V
Sbjct: 244 SSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVA 303
Query: 309 PNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
PNE T ++LSAC HVG + GRR + ++K+ IE +ID + G L+EA
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYVIKN--SIEINTTVGTTLIDFYAKCGCLEEAI 361
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+ R+ E N W +++ +G +G L H + L H S N
Sbjct: 362 LVFERLR-EKNVYTWTAMINGFAAHG-YAIGAVDLFHTM-LSSHVSPN 406
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 262/452 (57%), Gaps = 5/452 (1%)
Query: 31 SIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
S F S + L+ +++ C+ A + +++ + + P++ +F +L A
Sbjct: 47 SKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFP 106
Query: 91 T--IELGREIHCQTVGTGLDS-DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ +H GLD+ V V ALI MY+ C + ARKVF L ++ N W
Sbjct: 107 SESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK--NSVSW 164
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NTM+ G+ + G++ A LF+ M ++ ISWT LI G + +A+ F +MQ V
Sbjct: 165 NTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVA 224
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D ++++A L+ACA LGA+ LG W+H ++ + ++N+LIDMY++ G I A QV
Sbjct: 225 ADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQV 284
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F M +++++W ++I G A++G E+L+ F M++ KP+ +++ L+AC H GLV
Sbjct: 285 FVKMAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLV 344
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
G F+ MKS + I P+IE YGC++DL GRAG L++A ++ MP + N + GSLLA
Sbjct: 345 NKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLA 404
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A +GDV L E ++HL KL+P Y +LSNIYA +G+W+ + +R+ M+ GV+K
Sbjct: 405 ACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKK 464
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
PG S +E+ +VHEFVAGD H D D +Y +L
Sbjct: 465 PGYSSVEIDGKVHEFVAGDNYHADADNIYSML 496
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 161/374 (43%), Positives = 241/374 (64%), Gaps = 4/374 (1%)
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
+ D+ + +I Y + +AR +FD++ R +V WNT++ GYA +GD+ +F
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR--DVMSWNTVLEGYANIGDMEACERVF 144
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAV 226
+ M E+NV SW LI GYAQ + +E + F+RM E +V P++ M LSACA+LGA
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 227 ELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ G+W+H Y E G N + V + NALIDMY K G I A++VF+ +K + +I+W TMI G
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
LA HG G EAL++F M+ + + P+++TF+ +L AC H+GLVE G YFN M + + I P
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+IE GC++DLL RAG+L +A + + +MP +A+A IW +LL AS +Y V++GE AL+ L
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEEL 384
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
IKLEP N N+ +LSNIY GR++++ +++ MRD G KK G S+IE + +F +
Sbjct: 385 IKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSS 444
Query: 466 DTSHPDFDRLYQIL 479
HP + L +IL
Sbjct: 445 GEKHPRTEELQRIL 458
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 42/256 (16%)
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L M I A KVF E+ + NV +W +M+ GY DL +AR F+L E++++
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEK--NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIV 91
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
W T+I+GY +M EA +LF +M +V W
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMS----------------------W----- 124
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
N +++ YA G + +VF++M ++V +W +I G A +G E L
Sbjct: 125 ------------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVL 172
Query: 297 DMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
F RM + V PN+ T +LSAC +G + G+ ++ + + +ID
Sbjct: 173 GSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALID 232
Query: 356 LLGRAGYLQEAEKLLR 371
+ G+ G ++ A ++ +
Sbjct: 233 MYGKCGAIEIAMEVFK 248
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 256/459 (55%), Gaps = 34/459 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F SK +V +N I A Q + NAV + + ++PD+ +F +L
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ELG+ + + G +SD+H+ AL+ M+ +C
Sbjct: 521 PDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNC------------------------ 556
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
GDL +A LF M E++++SW T+IAG+ Q + A F+ MQ VKP
Sbjct: 557 ---------GDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKP 607
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D+I L+ACA A+ G +H I + L+ V + LI MY K G I A VF
Sbjct: 608 DQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVF 667
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
N+ K+V +WT+MI G A HG G+EAL++F +M++ VKP+ ITF+ LSAC H GL++
Sbjct: 668 HNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIK 727
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G +F MK + IEP++E YGCM+DL GRAG L EA + + +M + ++ +WG+LL A
Sbjct: 728 EGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGA 786
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
++ DVEL E Q ++L+P++ G Y ILSNIYA G W E K+RKVM D GV K P
Sbjct: 787 CQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKP 846
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G S+IEV RVH F + D +HP + ++ L +++ +MK
Sbjct: 847 GQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMK 885
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 211/420 (50%), Gaps = 43/420 (10%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G ++ A IF DVY +N + Q A L+ ++ ++PD Y+F ++L
Sbjct: 153 GNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYML 212
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A ++ G E+ + G D+D+ V ALI M+ C + DA KVF
Sbjct: 213 NACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVF--------- 263
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
NN + +++I+WT++I G A+ Q +A LF+ M+
Sbjct: 264 -----------------NN-------LPRRDLITWTSMITGLARHRQFKQACNLFQVMEE 299
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E V+PD++A ++ L AC A+E G+ +H +++ GL+T + + AL+ MY K G +
Sbjct: 300 EGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMED 359
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
AL+VF +K ++V++WT MIAG A HG EA F++M + ++PN +TF++IL AC
Sbjct: 360 ALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSR 419
Query: 324 VGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
++ GR+ + I+K+ Y + ++ ++ + + G L +A + R+ + N W
Sbjct: 420 PSALKQGRQIHDRIIKAGYITDDRVRT--ALLSMYAKCGSLMDARNVFERIS-KQNVVAW 476
Query: 383 GSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILSNIYAI----LGRWNESGKIR 436
+++ A + + Q L+K ++P +S +IL+ + LG+W +S IR
Sbjct: 477 NAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 180/389 (46%), Gaps = 35/389 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD ++ + + + G + A +F +V + I Q A + +
Sbjct: 336 GLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFF 395
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
NK+ S + P+ +F +L A + S ++ GR+IH + + G +D V AL+ MYA C
Sbjct: 396 NKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKC 455
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DAR VF+ +S + NV WN M+ Y + +NA A F+ + +
Sbjct: 456 GSLMDARNVFERISKQ--NVVAWNAMITAYVQHEKYDNAVATFQALLK------------ 501
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
E +KPD + L+ C A+ELG+W+ + I + G +
Sbjct: 502 -------------------EGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESD 542
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + NAL+ M+ G + A+ +F +M + +++W T+IAG HG + A D F M+
Sbjct: 543 LHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQE 602
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ VKP++ITF +L+AC + GRR ++ + ++ + +I + + G +
Sbjct: 603 SGVKPDQITFTGLLNACASPEALTEGRRLHALI-TEAALDCDVVVGTGLISMYTKCGSID 661
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+A + +P + N W S++ +G
Sbjct: 662 DAHLVFHNLP-KKNVYSWTSMITGYAQHG 689
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 169/309 (54%), Gaps = 6/309 (1%)
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVW--NVAVWNTMVAGYAKVGDLNNARALFELMTE 172
++L+Q+ K + D ++ + + ++ +WN +++ YAK G+ N+A+ +F+ M +
Sbjct: 108 SSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPD 167
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
K+V SW L+ GY Q + EA L +M + VKPD+ + L+ACA V+ G +
Sbjct: 168 KDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGEL 227
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
+ I G +T + + ALI+M+ K G + AL+VF N+ + +ITWT+MI GLA H
Sbjct: 228 FSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQF 287
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
++A ++F ME V+P+++ F+++L AC H +E G+R MK G++ +I
Sbjct: 288 KQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMK-EVGLDTEIYVGTA 346
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 410
++ + + G +++A ++ + N W +++A +G +E +I+ +EP
Sbjct: 347 LLSMYTKCGSMEDALEVFNLVKGR-NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 411 HNSGNYAIL 419
+ +IL
Sbjct: 406 NRVTFMSIL 414
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 37/321 (11%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I+R G + + H+ + + + G A ++F + D+ +NT I Q
Sbjct: 533 LIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQF 592
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A + +Q S ++PD +F +L A + GR +H LD DV V LI
Sbjct: 593 AFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLIS 652
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY C G +++A +F + +KNV SWT
Sbjct: 653 MYTKC---------------------------------GSIDDAHLVFHNLPKKNVYSWT 679
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++I GYAQ + EA+ LF +MQ E VKPD I + ALSACA G ++ G ++ +
Sbjct: 680 SMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDF 739
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDM 298
+ + ++D++ ++G + +A++ M+ K W ++ +H L E +
Sbjct: 740 NIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVH-LDVELAEK 798
Query: 299 FSRMERARVKPNEITFIAILS 319
++ ++ + PN+ ILS
Sbjct: 799 VAQ-KKLELDPNDDGVYVILS 818
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
E + KN + ++ Q +EA+ + + +++ + L C + +
Sbjct: 62 EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLG 121
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
GE IHN+I+ + + + N LI MYAK G A Q+F+ M +K V +W ++ G
Sbjct: 122 DGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYV 181
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
H EA + +M + VKP++ TF+ +L+AC V+ G F+++ + G + +
Sbjct: 182 QHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNA-GWDTDL 240
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+I++ + G + +A K+ +P + W S++
Sbjct: 241 FVGTALINMHIKCGGVDDALKVFNNLP-RRDLITWTSMITG 280
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 272/497 (54%), Gaps = 41/497 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD----YAYSIFTHKSKP-DVYLYNTTIKALCQT-DNPL 58
GL + L++R + C+ G + YA +F P DV YNT ++ ++ D
Sbjct: 46 GLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRIPTPGDVVWYNTLLRGYARSSDGAA 105
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A + ++ + PD Y+F +LKA E GR+ H V TG +V+ LI
Sbjct: 106 EAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLI 165
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN-VIS 177
MYA C GD +ARA+F + + V+S
Sbjct: 166 NMYAEC---------------------------------GDARSARAMFGRVPNGDCVVS 192
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
+ +I + +P EA+ LFR MQ + +KP + + + LSACA LGA+ELG WIH Y+
Sbjct: 193 YNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELGRWIHEYVR 252
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ GL+++V +N ALIDMY K G + A+ VF+ M+++ W+ MI A H GREA+
Sbjct: 253 KAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAIS 312
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M++ ++P+ +TF+ +L AC H G+V G +YF+ M+ YGI P I+ YGC+ DLL
Sbjct: 313 LFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVPGIKHYGCVTDLL 371
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
R+G L++A K + +P + A +W +LL+A +G V+LG+ + +++L+ + +Y
Sbjct: 372 ARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFERILELDDTHGSDYV 431
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
I SN+ A G+W E ++RK+M + GV K+PGCS IE+ RVHEF AGD HP +
Sbjct: 432 IFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEFFAGDGRHPQSQDARR 491
Query: 478 ILCKINGQMKFAEHLQN 494
++ ++ Q+K ++ N
Sbjct: 492 MVDQVIEQLKLVGYVPN 508
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 264/468 (56%), Gaps = 34/468 (7%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D AYS+F + D ++ + + + + ++ + PDNY+ PFV++
Sbjct: 52 DDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTC 111
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ +++GR IH + GL SD V A+L+ MYA C + DA++
Sbjct: 112 RDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQR-------------- 157
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
LFE M K++++WT +I YA + E++ LF RM+ E V
Sbjct: 158 -------------------LFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGV 197
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
PD++AM+ ++ACA+LGA+ + ++YI + G + V L A+IDMYAK G + A +
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF+ MK K+VI+W+ MIA HG G++A+D+F M + PN +TF+++L AC H GL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+E G R+FN M + + P ++ Y CM+DLLGRAG L EA +L+ M E + +W +LL
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A I+ +EL E A L++L+P N G+Y +LSNIYA G+W + K R +M +KK
Sbjct: 378 GACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
+PG ++IEV + ++F GD SHP +Y++L + +++ A ++ +
Sbjct: 438 IPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPD 485
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLR--VWNVAVWNTMVAGYAKVGDLNNARALFELMTEK 173
+ I + C+ ++ R+V + + ++ + N ++ YA+ +++A +LF+ +T +
Sbjct: 5 SCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMR 64
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
+ +W+ ++ G+A+ FR + V PD + + C +++G IH
Sbjct: 65 DSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIH 124
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ + ++GL + + +L+DMYAK + A ++FE M +K ++TWT MI A
Sbjct: 125 DVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAY 183
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
E+L +F RM V P+++ + +++AC +G + R+ N R G + M
Sbjct: 184 ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRA-RFANDYIVRNGFSLDVILGTAM 242
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
ID+ + G ++ A ++ RM E N W +++AA +G
Sbjct: 243 IDMYAKCGSVESAREVFDRMK-EKNVISWSAMIAAYGYHG 281
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 289/490 (58%), Gaps = 11/490 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M R L N +LS + + LG A +F + DV +NT + A ++ +A
Sbjct: 112 MSTRNLYSWNGMLSGY----AKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDA 167
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y +++ + + YSF +L VK+ +EL ++ H Q + G S++ + ++++
Sbjct: 168 LRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDA 227
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + DAR++FDE+ +R +V W TMV+GYA+ GD+ AR LF+LM EKN ++WT+
Sbjct: 228 YAKCSEMGDARRLFDEMIIR--DVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTS 285
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LIAGYA+ D ++A+ LF +M N++PD+ + L A A + ++ G+ IH Y+ +
Sbjct: 286 LIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTN 345
Query: 241 L--NTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALD 297
+ NTIV ++LIDMY+K G + VF+ M +K V+ W T+I+ LA HG G+EA+
Sbjct: 346 IRPNTIVV--SSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQ 403
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF M R +KP+ IT I +L+AC H GLV+ G R + + S +G+ P E Y C+IDLL
Sbjct: 404 MFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLL 463
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG+ L +MP + N IW +LL ++G++E G + +I+L+P +S Y
Sbjct: 464 GRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYV 523
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LS+I+A +GRW +R++M + V+K S+IE+ +VH F A D HP + +Y
Sbjct: 524 LLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYL 583
Query: 478 ILCKINGQMK 487
L ++ G M+
Sbjct: 584 ALKQLAGHME 593
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 184/369 (49%), Gaps = 38/369 (10%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLD-SDVHVVAALIQMYASCK 125
+ + +R + + ++L+ +++LG+ +H TGL + + LI MY+ C
Sbjct: 41 LSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCG 100
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
A KVFDE+S R N+ WN M++GYAK+G + AR LF+ M EK+V+SW T++ Y
Sbjct: 101 DYPSAYKVFDEMSTR--NLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAY 158
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
A+ N+A+ +R ++ + +E + L+ C ++ +EL + H + G + +
Sbjct: 159 AKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNL 218
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM----------------------- 282
++++++D YAK ++G A ++F+ M + V+ WTTM
Sbjct: 219 VISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEK 278
Query: 283 --------IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
IAG A H LG +AL++F++M ++P++ TF + L A + + G++
Sbjct: 279 NPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIH 338
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ R I P +ID+ + G L+ + M + + +W +++++ +G
Sbjct: 339 GYL-IRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGR 397
Query: 395 VELGECALQ 403
G+ A+Q
Sbjct: 398 ---GQEAIQ 403
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 245/406 (60%), Gaps = 33/406 (8%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
PB + VL KL +E+G I L S++ V A+++MY C
Sbjct: 4 PBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKC--------- 54
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
G +++ R +F+ M ++V+ W+ +IAGYAQ + NE
Sbjct: 55 ------------------------GAVDDGRLVFDHMARRDVVXWSAMIAGYAQNGRSNE 90
Query: 194 AITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
A+ LF M+ +KP+++ +++ LSACAQLG+VE GE I +Y+E GL + V + +AL+
Sbjct: 91 ALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLG 150
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MY+K G I KA Q+F+ + + +TW +MI GLA++G +A+ +++RM+ VKPN IT
Sbjct: 151 MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNIT 210
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ +L+AC H G VELG +F M+S + I P IE + C++DL R+G L +A + + RM
Sbjct: 211 FVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRM 270
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
E N IWG+LL+AS I+ +VEL E A + L++LEP NSGNY ILSNIYA RW E+
Sbjct: 271 EVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASASRWQEAL 330
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K+RK+M+D V+K S++EV RVH+F+ GDTSHP D +Y +
Sbjct: 331 KVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTI 376
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+PBEI + LS CA+LG +E+G I + L + + ++ A+++MY K G +
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 62
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF++M + V+ W+ MIAG A +G EAL++F M+ A++KPN++T +++LSAC +G
Sbjct: 63 VFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGS 122
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G R + ++SR G+ + ++ + + G + +A ++ ++P N W S++
Sbjct: 123 VETGERIGSYVESR-GLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVT-WNSMI 180
Query: 387 AASNIYGDVELGECALQHL--IKLEPHN 412
I G E + I+++P+N
Sbjct: 181 MGLAINGFAEDAIALYNRMKEIEVKPNN 208
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 3 VRGLDQNNHLLSRFIDSCSSL------GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
++ L N +L S I S + L G D +F H ++ DV ++ I Q
Sbjct: 28 IKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVXWSAMIAGYAQNGR 87
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A+ L+ ++++ ++P++ + VL A +L ++E G I GL S+V+V +A
Sbjct: 88 SNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASA 147
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ MY+ C I AR++FD+L R + WN+M+ G A
Sbjct: 148 LLGMYSKCGNIIKARQIFDKLPQR--DNVTWNSMIMGLA--------------------- 184
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNY 235
I G+A+ +AI L+ RM+ VKP+ I + L+AC G VELG E+ +
Sbjct: 185 -----INGFAE-----DAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSM 234
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ ++ + ++D++ +SG++ A + M+ +V+ W T+++ +H
Sbjct: 235 RSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIH 289
>gi|449436789|ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 265/458 (57%), Gaps = 34/458 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I++ L + + FI++C L A+ FTH KP V++ N+ I+A + P
Sbjct: 35 LILQNLHSHPLIAHHFINTCHHLHLLGSAFLFFTHIPKPHVFICNSLIRAFSHSKIPHTP 94
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY + +++ P+NY+FPFVLK++ + G+ +H V +G SD++V L+ +
Sbjct: 95 LFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSVHTHVVKSGHASDLYVQNTLMDV 154
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YASC + +KVFDE+ +V W ++ GY R F L
Sbjct: 155 YASCGKMGLCKKVFDEMLHT--DVVSWTILIMGY---------RVSFML----------- 192
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
++A+ +F +MQ V P+ + ++ AL+ACA GA+E+G WIH +++
Sbjct: 193 -----------DDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKR 241
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
V L ALIDMY K G+I +AL VF+ MK K+V TW I GLA G EA+ F
Sbjct: 242 WEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFK 301
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYF-NIMKSRYGIEPKIEQYGCMIDLLGR 359
RM+ V+ +++T +A+LSAC H GLV GR+ F +++ R+G P I+ Y CM+D+L R
Sbjct: 302 RMDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILAR 361
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G ++EA +++ MPFEA ++WGSLL S +G +E+ E A + L+++EP N G Y +L
Sbjct: 362 NGCIEEACVMIKDMPFEATRSMWGSLLTGSRAHGSLEVSEIAARRLVEMEPENGGYYVVL 421
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
SNIYA +G+W+E K+R++M++ G+KK G S +E+ +
Sbjct: 422 SNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQE 459
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/374 (43%), Positives = 241/374 (64%), Gaps = 4/374 (1%)
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
+ D+ + +I Y + +AR +FD++ R +V WNT++ GYA +GD+ +F
Sbjct: 34 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR--DVMSWNTVLEGYANIGDMEACERVF 91
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAV 226
+ M E+NV SW LI GYAQ + +E + F+RM E +V P++ M LSACA+LGA
Sbjct: 92 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 151
Query: 227 ELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ G+W+H Y E G N + V + NALIDMY K G I A++VF+ +K + +I+W TMI G
Sbjct: 152 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 211
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
LA HG G EAL++F M+ + + P+++TF+ +L AC H+GLVE G YFN M + + I P
Sbjct: 212 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 271
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+IE GC++DLL RAG+L +A + + +MP +A+A IW +LL AS +Y V++GE AL+ L
Sbjct: 272 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEEL 331
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
IKLEP N N+ +LSNIY GR++++ +++ MRD G KK G S+IE + +F +
Sbjct: 332 IKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSS 391
Query: 466 DTSHPDFDRLYQIL 479
HP + L +IL
Sbjct: 392 GEKHPRTEELQRIL 405
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 40/230 (17%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
NV +W +M+ GY DL +AR F+L E++++ W T+I+GY +M EA +LF +M
Sbjct: 5 NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP 64
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+V W N +++ YA G +
Sbjct: 65 CRDVMS----------------------W-----------------NTVLEGYANIGDME 85
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSAC 321
+VF++M ++V +W +I G A +G E L F RM + V PN+ T +LSAC
Sbjct: 86 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 145
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+G + G+ ++ + + +ID+ G+ G ++ A ++ +
Sbjct: 146 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 195
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 273/460 (59%), Gaps = 22/460 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR N +L ++ S G D A +F + DV+ + I Q A
Sbjct: 425 MPVRNTVSWNVMLKGYVKS----GLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKA 480
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++LY+ ++ S L P+ +L A + +IE GR+ H V G + A +I
Sbjct: 481 LLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISF 540
Query: 121 YASCKCI---YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
YA+C+ I Y ++ D+ L NV M+ G+ K G ++ AR +F++M EK+V S
Sbjct: 541 YAACRRIDLAYLQYQMSDKSHLTSSNV-----MIVGFTKNGMIDQARQIFDMMPEKDVFS 595
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+T+I+GYAQ + P+ A+ LF M V+P+EI M++ SA A LG + G W H Y+
Sbjct: 596 WSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYV- 654
Query: 238 QYGLNTIVPLNN----ALIDMYAKSGKIGKALQVFENMKNKS--VITWTTMIAGLALHGL 291
N ++PLN+ A+IDMYAK G I AL VF +K+K+ V W +I GLA+HG
Sbjct: 655 ---CNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 711
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+L++FS ++R +K N ITF+ +LSACCH GLVE+G RYF MK+++G+EP I+ YG
Sbjct: 712 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 771
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
C++DLLGR G L+EAE+++R MP +A+ IWG+LLA+S +G+VE+GE A ++L +L+P
Sbjct: 772 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 831
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+ +LSN+YA G W ++ +R+ ++ + + PG S
Sbjct: 832 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYS 871
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 191/401 (47%), Gaps = 35/401 (8%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + Y T I L Q D A+ ++ ++++ + P+ + V+ A
Sbjct: 317 ARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSH 376
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ I R +H + V + L+ MY + D +++F+E+ +R N WN
Sbjct: 377 IGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVR--NTVSWN 434
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
M+ GY K G ++ AR LFE + E++V SW +I G+ QM + +A+ L+ M+ ++ P
Sbjct: 435 VMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHP 494
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-------NTIVPL-------------- 247
+E+ ++ LSAC Q ++E G H+ I + G TI+
Sbjct: 495 NEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQY 554
Query: 248 ----------NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+N +I + K+G I +A Q+F+ M K V +W+TMI+G A + L ALD
Sbjct: 555 QMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALD 614
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M ++V+PNEIT +++ SA +G + GR + ++ I +ID+
Sbjct: 615 LFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKV-IPLNDNLSAAIIDMY 673
Query: 358 GRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYGDVEL 397
+ G + A + R++ + + + W +++ ++G L
Sbjct: 674 AKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANL 714
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 193/427 (45%), Gaps = 76/427 (17%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
LK S I G++IH + G +S+ ++ +LI MY C + AR +FD S V
Sbjct: 239 LKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCS--VL 296
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ N M++GY K+ L NAR LF M E+ +S+TT+I G AQ D EAI +F+ M+
Sbjct: 297 DSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMR 356
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTI--------------- 244
V P+E+ M + +SAC+ +G + +H + + +GL I
Sbjct: 357 SAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLK 416
Query: 245 --------VPLNNA-----LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+P+ N ++ Y KSG + +A ++FE + + V +W MI G
Sbjct: 417 DTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKR 476
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK------------- 338
R+AL ++S M ++ + PNE+ + +LSAC +E GR++ +++
Sbjct: 477 LRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQAT 536
Query: 339 --SRYGIEPKIE----QY-----------GCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
S Y +I+ QY MI + G + +A ++ MP E +
Sbjct: 537 IISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP-EKDVFS 595
Query: 382 WGSLLAASNIYGDVELGECALQHL-----IKLEPHNSGNYAILSNIYAI----LGRWNES 432
W ++++ Y EL + AL K+EP+ ++ S I A+ GRW
Sbjct: 596 WSTMISG---YAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHE 652
Query: 433 GKIRKVM 439
KV+
Sbjct: 653 YVCNKVI 659
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 31/147 (21%)
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG---------- 259
E+++++AL CA A+ G+ IH + +YG N+ + N+LI+MY K G
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291
Query: 260 ---------------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
++ A Q+F M + +++TTMI GLA + EA+++
Sbjct: 292 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 299 FSRMERARVKPNEITFIAILSACCHVG 325
F M A V PNE+T +++SAC H+G
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIG 378
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/528 (34%), Positives = 293/528 (55%), Gaps = 47/528 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G Q+ + +R ++ ++LG + F + DVY +N+ I A + A
Sbjct: 42 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEA 101
Query: 61 V-ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ Y + S +RPD Y+FP VLKA T+ GR+IHC G +V V A+LI
Sbjct: 102 IGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIH 158
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAG-------------------------- 153
MY+ AR +FD++ R ++ WN M++G
Sbjct: 159 MYSRFGFTGIARSLFDDMPFR--DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNF 216
Query: 154 -------------YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
YAK+G L++A +FE++ K+VISW TLI GYAQ +EAI +++
Sbjct: 217 VTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKM 276
Query: 201 MQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M+ + + P++ ++ L A A +GA++ G IH + + L+ V + LID+Y K G
Sbjct: 277 MEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCG 336
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
++ A+ +F + +S +TW +I+ +HG + L +F M VKP+ +TF+++LS
Sbjct: 337 RLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLS 396
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H G VE G+ F +M+ YGI+P ++ YGCM+DLLGRAGYL+ A ++ MP + +A
Sbjct: 397 ACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDA 455
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+IWG+LL A I+G++ELG+ A L +++ N G Y +LSNIYA +G+W K+R +
Sbjct: 456 SIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLA 515
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
R+ G+KK PG S IEV+++V F G+ SHP +Y+ L + +MK
Sbjct: 516 RERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK 563
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 264/463 (57%), Gaps = 6/463 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F ++N I Q+ +A L+ ++ + + D ++F VL A
Sbjct: 253 ARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN 312
Query: 89 LSTIELGREIHCQTVGTGL----DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
G+ +H Q + ++ + V AL+ +Y+ I A+++FD ++L+ +V
Sbjct: 313 AGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK--DV 370
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
WNT+++GY G L+ A +F++M KN +SW +++GY +A+ LF +M+ E
Sbjct: 371 VSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 430
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+VKP + A++AC +LGA++ G +H ++ Q G NAL+ MYAK G + A
Sbjct: 431 DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDA 490
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
VF M N ++W MI+ L HG GREAL++F +M + P+ I+F+ IL+AC H
Sbjct: 491 RLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHA 550
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV+ G YF MK +GI P + Y +IDLLGR+G + EA L++ MPFE +IW +
Sbjct: 551 GLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEA 610
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
+L+ GD+E G A L ++ P + G Y +LSN Y+ GRW ++ ++RK+MRD GV
Sbjct: 611 ILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGV 670
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
KK PGCS+IEV ++H F+ GDT HP+ +YQ L I +M+
Sbjct: 671 KKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 713
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 192/363 (52%), Gaps = 20/363 (5%)
Query: 37 SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS-ALRPDNYSFPFVLKAVVKLSTIELG 95
++ D L+N + A + AV +++ + S +LRPD+YSF ++ AV ++ +
Sbjct: 123 ARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAP 182
Query: 96 R--EIHCQTVGTGLDSDVHVVAALIQMYASC---KCIYDARKVFDELSLRVWNVAVWNTM 150
++HC + +G + + V ALI +Y C + +DARKV DE+ + + W TM
Sbjct: 183 HCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDK--DDLTWTTM 240
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V GY + GD+N AR++FE + K + W +I+GY Q +A LFRRM E V DE
Sbjct: 241 VVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDE 300
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI----VPLNNALIDMYAKSGKIGKALQ 266
+ LSACA G G+ +H I + N + +P+NNAL+ +Y+K GKI A +
Sbjct: 301 FTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKR 360
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F+ M K V++W T+++G G +A+++F M N+++++ ++S H GL
Sbjct: 361 IFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGL 416
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANAAIWG 383
E + FN M++ ++P Y I G G L+ +L L + FEA+ +
Sbjct: 417 SEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGN 475
Query: 384 SLL 386
+LL
Sbjct: 476 ALL 478
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 248/394 (62%), Gaps = 5/394 (1%)
Query: 113 VVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
V +L+++Y S I AR+V + +V WNTMV+GY K GDL AR +F M E
Sbjct: 115 VTNSLLKLYCSLGLIDRARRVLYSGGAAL-DVVSWNTMVSGYGKGGDLGAAREVFARMPE 173
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
+N++SW+ ++ + + EA+ +F RM E +PD + +++ L ACA LGAVE G W+
Sbjct: 174 RNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWV 233
Query: 233 HNYIEQY---GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
H Y+E G + L AL+DMY K G + A QVF+ + + V+ W MI GLA++
Sbjct: 234 HRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMN 293
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G G AL++F RM + PNE TFIA+L AC H G V+ G+R F M+ YGI+P+ E
Sbjct: 294 GYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREH 352
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
YGC+ DLLGRAG ++EAE LL MP E +A+ WG+L+++ ++ D+ +GE + LI+LE
Sbjct: 353 YGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELE 412
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
P++ G Y +L N+YA+ GRW E+ IR++M D G KK G S+IE++ VHEF++GDT H
Sbjct: 413 PYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRH 472
Query: 470 PDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
P ++Y +L I +++ ++++ +++ D
Sbjct: 473 PLTRKIYALLEDIERRLQLIGYVKDTSQVIMDMD 506
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 39/266 (14%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + ++ ++ + A + A+ +++++ RPD VLKA
Sbjct: 164 AREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAH 223
Query: 89 LSTIELGREIH----CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
L +E GR +H + G G ++ + AL+ MY C C+ DA +VFD + R +V
Sbjct: 224 LGAVERGRWVHRYLETGSFG-GRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRR--DV 280
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+WN M+ G A + GY + A+ LFRRM +
Sbjct: 281 VLWNAMIGGLA--------------------------MNGYGE-----RALELFRRMLQK 309
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
P+E +A L AC G V+ G+ + ++ YG+ L D+ ++G + +A
Sbjct: 310 GFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEA 369
Query: 265 LQVFENMK-NKSVITWTTMIAGLALH 289
+ +M W +++ +H
Sbjct: 370 EALLLDMPMEPHASQWGALMSSCQMH 395
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 272/468 (58%), Gaps = 6/468 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD-YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++ GL ++ SR + C+ G YA + H +P+ +++NT I+AL P
Sbjct: 57 LVKSGLAKDPIAASRAVAFCAGPGRDVLYAERLVRHHPRPNSFMWNTVIRALSDGARPDA 116
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV L+ + +S PD SFP +L A +L G +H + GL D +V A I
Sbjct: 117 AVALFVDMLSSPTPPDRRSFPSLLAAYARLGRAGDGEALHGMALKLGLAGDAYVRNATIA 176
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYASC +A +F + +V N+++ A+ G ++ AR++F+ M E+ V +W+
Sbjct: 177 MYASCGRADEALALFGQCP--ELDVVACNSVIVALARAGRVDEARSVFDAMPERTVATWS 234
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+++ YA+ + +EA+ LF MQ + ++P+ +++ L CA LGA+ G W+H YI+++
Sbjct: 235 AMVSAYARAARCSEALALFSAMQADGMEPNANVLVSVLGCCASLGALVQGAWVHEYIDRH 294
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI---TWTTMIAGLALHGLGREAL 296
G+ + AL+DMY K G + A QVF+ +++ + +W +M+ GLA+HG REA+
Sbjct: 295 GVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGLAKLSSWNSMMQGLAVHGQWREAV 354
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+FS ++ + P+ +TFIA+L+A H G+ + + F M S +G+EP IE YGC++D
Sbjct: 355 ALFSELKSYGLSPDNVTFIAVLTAYGHSGMPDEAQAAFASMSSEHGVEPGIEHYGCLVDA 414
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
L RAG L+EAE +R MP +AAIWG+LL+ ++GD ELG A + ++ +P +SG Y
Sbjct: 415 LARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLHGDAELGARAAREAVRCDPRDSGAY 474
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA 464
+ +++ A G IR MR+ GV K+PG S IEV+ VHEFV+
Sbjct: 475 VLAASVLARGGDPGRGAGIRGRMREAGVGKVPGSSMIEVNGVVHEFVS 522
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 272/484 (56%), Gaps = 36/484 (7%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C LG + ++ T K+ V + I +++ L+ ++Q + P+ +
Sbjct: 245 CGHLGLARQLFNGLTQKT---VVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM 301
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
++ ++LG+++H + G + + AL+ MY C
Sbjct: 302 LSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCS-------------- 347
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
D+ NARALF+ ++V+ WT +++ YAQ + ++A LF
Sbjct: 348 -------------------DIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFD 388
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+M+ V+P ++ +++ LS CA GA++LG+W+H+YI++ + LN AL+DMYAK G
Sbjct: 389 QMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCG 448
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
I A ++F ++ + W +I G A+HG G EALD+F+ MER VKPN+ITFI +L
Sbjct: 449 DINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLH 508
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLV G++ F M +G+ P+IE YGCM+DLLGRAG L EA ++++ MP + N
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 568
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+WG+L+AA ++ + +LGE A L+++EP N G ++SNIYA RW+++ +RK M
Sbjct: 569 IVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTM 628
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGV 499
+ +G+KK PG S IEV+ VHEF+ GD SHP R+ ++L ++ ++ A ++ + + +
Sbjct: 629 KTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 688
Query: 500 LESD 503
L D
Sbjct: 689 LNID 692
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 37/315 (11%)
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
N+ P VLKA ++S +LG+EIH + GLD DV V AL+ MY C C+ AR VFD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ M E++V+SW+T+I ++ + + A+
Sbjct: 154 K---------------------------------MMERDVVSWSTMIRSLSRNKEFDMAL 180
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI--VPLNNALID 253
L R M V+P E+AM++ ++ A + +G+ +H Y+ + N VP AL+D
Sbjct: 181 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLD 240
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G +G A Q+F + K+V++WT MIAG E +F RM+ + PNEIT
Sbjct: 241 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEIT 300
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
++++ C G ++LG++ + R G + ++D+ G+ ++ A L
Sbjct: 301 MLSLIVECGFTGALQLGKQLHAYI-LRNGFSVSLALATALVDMYGKCSDIRNARALFDST 359
Query: 374 PFEANAAIWGSLLAA 388
+ IW ++L+A
Sbjct: 360 Q-NRDVMIWTAMLSA 373
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 193/409 (47%), Gaps = 42/409 (10%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+GLD++ + + + +YA +F + DV ++T I++L + A+ L
Sbjct: 123 KGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALEL 182
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHV--VAALIQMY 121
++ +RP + ++ + + +G+ +H + + + V AL+ MY
Sbjct: 183 IREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 242
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C G L AR LF +T+K V+SWT +
Sbjct: 243 AKC---------------------------------GHLGLARQLFNGLTQKTVVSWTAM 269
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
IAG + ++ E LF RMQ EN+ P+EI ML+ + C GA++LG+ +H YI + G
Sbjct: 270 IAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF 329
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + L AL+DMY K I A +F++ +N+ V+ WT M++ A +A ++F +
Sbjct: 330 SVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 389
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRA 360
M + V+P ++T +++LS C G ++LG+ + I K R ++ + ++D+ +
Sbjct: 390 MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT--ALVDMYAKC 447
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
G + A +L + +W +++ ++G GE AL ++E
Sbjct: 448 GDINAAGRLFIE-AISRDICMWNAIITGFAMHG---YGEEALDIFAEME 492
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 258/433 (59%), Gaps = 12/433 (2%)
Query: 73 RPDNYSFPFVLK-----------AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
R + +SF F+L A +++ +G +H V G D++V A I Y
Sbjct: 118 RRNPHSFTFLLASLSNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFY 177
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C + RKVFDEL + V +V WN ++AGY + G + AR +F+ M ++ +SW+T+
Sbjct: 178 GVCGDVAAMRKVFDELPI-VRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTV 236
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I GY + +P A+ +F+ M + VK +E A++ ALSA AQLG +E G+++H +++ G+
Sbjct: 237 IGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGM 296
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V L ALIDMY+K G + A +VF+ M + V W +MI GLA HGLG +A+ +F +
Sbjct: 297 TMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEK 356
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
P ITF+ +L+AC GLV+ GRRYF +M +Y IE ++E YGCM+DLL RAG
Sbjct: 357 FVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAG 416
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
+QEA +L+ M + +WG++L+A +G V+LG LI+L+P + G Y +L++
Sbjct: 417 LVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLAS 476
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
IYA +W+E K+RK+M + G K G S +E VH+F+ GD +H D R+Y +LC
Sbjct: 477 IYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCT 536
Query: 482 INGQMKFAEHLQN 494
IN ++ A ++ +
Sbjct: 537 INRRLAEAGYVPD 549
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 128/292 (43%), Gaps = 39/292 (13%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
IVR + N +L+ ++ + G A +F D ++T I + P A+
Sbjct: 195 IVRDVVTWNAVLAGYVRA----GMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVAL 250
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
++ + A ++ + + L A +L +E G+ +H G+ V++ AALI MY
Sbjct: 251 GVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMY 310
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ C + A++VFD + R +V WN+M+ G A G
Sbjct: 311 SKCGSVAAAKEVFDAMPRR--DVFAWNSMICGLATHG----------------------- 345
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYG 240
++A+ LF + E P I + L+AC++ G V+ G + E+Y
Sbjct: 346 --------LGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYD 397
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
+ + + ++D+ +++G + +A+++ E M+ + W T+++ HGL
Sbjct: 398 IESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGL 449
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 226/336 (67%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
DL+N R L ++ + SWT++IAGY Q + EAI LF +M+ VK +E+ ++A L+
Sbjct: 176 DLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLA 235
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
ACA LGA++LG IH Y ++G V ++N LIDMY K G + +A +VFE M+ ++V++
Sbjct: 236 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 295
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W+ MI GLA+HG EAL +FS M + ++PN +TFI +L AC H+GL+ GRR+F M
Sbjct: 296 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 355
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
YGI P+IE YGCM+DLL RAG L EA + + MP + N +WG+LL A ++ +VE+
Sbjct: 356 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 415
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
E A++HL++L+P N G Y +LSNIYA GRW ++ ++RK M+D VKK PG S I V
Sbjct: 416 EEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGV 475
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
VHEFVAG+ SHPD ++++Q ++ +M+ ++ N
Sbjct: 476 VHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 511
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 147/314 (46%), Gaps = 37/314 (11%)
Query: 13 LSRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
L+R C+ YA IF K KP+ +++N+ +KAL + D+P++A++L+ +++
Sbjct: 96 LTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQY 155
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
+ PD ++ VL+A + L + GR +H G S ++A +Q + + I+
Sbjct: 156 DVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHLF 215
Query: 131 RKVFD-----------------------ELSLRVW----------NVAVWNTMVAGYAKV 157
K+ + +L +R+ NV + NT++ Y K
Sbjct: 216 AKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKC 275
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
G L A +FE M E+ V+SW+ +I G A + EA+ LF M ++P+ + + L
Sbjct: 276 GCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLL 335
Query: 218 SACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-S 275
AC+ +G + G + + YG+ + ++D+ +++G + +A + NM K +
Sbjct: 336 HACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPN 395
Query: 276 VITWTTMIAGLALH 289
+ W ++ +H
Sbjct: 396 GVVWGALLGACRVH 409
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 262/452 (57%), Gaps = 5/452 (1%)
Query: 31 SIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
S F S + L+ +++ C+ A + +++ + + P++ +F +L A
Sbjct: 47 SKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFP 106
Query: 91 T--IELGREIHCQTVGTGLDS-DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ +H GLD+ V V ALI MY+ C + ARKVF L ++ N W
Sbjct: 107 SESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK--NSVSW 164
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NTM+ G+ + G++ A LF+ M ++ ISWT LI G + +A+ F +MQ V
Sbjct: 165 NTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVA 224
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D ++++A L+ACA LGA+ LG W+H ++ + ++N+LIDMY++ G I A QV
Sbjct: 225 ADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQV 284
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F M +++++W ++I G A++G E+L+ F M++ KP+ +++ L+AC H GLV
Sbjct: 285 FVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLV 344
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
G F+ MKS + I P+IE YGC++DL GRAG L++A ++ MP + N + GSLLA
Sbjct: 345 NKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLA 404
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A +GDV L E ++HL KL+P Y +LSNIYA +G+W+ + +R+ M+ GV+K
Sbjct: 405 ACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKK 464
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
PG S +E+ +VHEFVAGD H D D +Y +L
Sbjct: 465 PGYSSVEIDGKVHEFVAGDNYHADADNIYSML 496
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 278/469 (59%), Gaps = 13/469 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+IV GL ++ L + + C+ L YA IF S P+ +LY + + PL+
Sbjct: 47 LIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTGY-SSSLPLH 105
Query: 60 AVILYN----KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A ++ + S RP+++ +P VLK+ LS+ +H +G V V
Sbjct: 106 ASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQT 165
Query: 116 ALIQMYASC-KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AL+ YAS I AR++FDE+S R NV W M++GYA+ GD+ NA ALFE M E++
Sbjct: 166 ALLHSYASSVSHITLARQLFDEMSER--NVVSWTAMLSGYARSGDIFNAVALFEEMPERD 223
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIH 233
V SW ++A Q EA++LFRRM + ++P+E+ ++ LSACAQ G ++L + IH
Sbjct: 224 VPSWNAILAACTQNGLFVEAVSLFRRMINDPCIRPNEVTLVCVLSACAQTGTLQLAKGIH 283
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ + L++ V ++N+L+D+Y K G + +A VF+ KS+ W +MI ALHG
Sbjct: 284 AFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNSMINCFALHGRSE 343
Query: 294 EALDMFSRMERAR---VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EA+ +F M + +KP+ ITFI +L+AC H GLV GR YF++MK R+GIEP+IE Y
Sbjct: 344 EAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRFGIEPRIEHY 403
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GC+IDLLGRAG EA + + M EA+ AIWGSLL A YG ++L E A+++L+ L P
Sbjct: 404 GCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLAEVAVKNLVALNP 463
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
+N G A+++N+Y +G W E+ + RK+++ K PG S IE+ ++
Sbjct: 464 NNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSQIEIDNKL 512
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 258/433 (59%), Gaps = 12/433 (2%)
Query: 73 RPDNYSFPFVLK-----------AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
R + +SF F+L A +++ +G +H V G D++V A I Y
Sbjct: 118 RRNPHSFTFLLASLSNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFY 177
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C + RKVFDEL + V +V WN ++AGY + G + AR +F+ M ++ +SW+T+
Sbjct: 178 GVCGDVAAMRKVFDELPI-VRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTV 236
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I GY + +P A+ +F+ M + VK +E A++ ALSA AQLG +E G+++H +++ G+
Sbjct: 237 IGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGM 296
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V L ALIDMY+K G + A +VF+ M + V W +MI GLA HGLG +A+ +F +
Sbjct: 297 TMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEK 356
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
P ITF+ +L+AC GLV+ GRRYF +M +Y IE ++E YGCM+DLL RAG
Sbjct: 357 FVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAG 416
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
+QEA +L+ M + +WG++L+A +G V+LG LI+L+P + G Y +L++
Sbjct: 417 LVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLAS 476
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
IYA +W+E K+RK+M + G K G S +E VH+F+ GD +H D R+Y +LC
Sbjct: 477 IYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCT 536
Query: 482 INGQMKFAEHLQN 494
IN ++ A ++ +
Sbjct: 537 INRRLAEAGYVPD 549
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 128/292 (43%), Gaps = 39/292 (13%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
IVR + N +L+ ++ + G A +F D ++T I + P A+
Sbjct: 195 IVRDVVTWNAVLAGYVRA----GMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVAL 250
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
++ + A ++ + + L A +L +E G+ +H G+ V++ AALI MY
Sbjct: 251 GVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMY 310
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ C + A++VFD + R +V WN+M+ G A G
Sbjct: 311 SKCGSVAAAKEVFDAMPRR--DVFAWNSMICGLATHG----------------------- 345
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYG 240
++A+ LF + E P I + L+AC++ G V+ G + E+Y
Sbjct: 346 --------LGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYD 397
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
+ + + ++D+ +++G + +A+++ E M+ + W T+++ HGL
Sbjct: 398 IESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGL 449
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 261/437 (59%), Gaps = 7/437 (1%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+A++L+ + + PD+++ +L ++ I G+EIH + GL S+ V AL+
Sbjct: 389 DALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALV 448
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT----EKN 174
+MY C I A+ FDE+S R + + WN +++GYA+ + R L E M E N
Sbjct: 449 EMYCKCNDIIAAQMAFDEISER--DTSTWNALISGYARCNQIGKIRELVERMKSDGFEPN 506
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V +W +++AG + Q + A+ LF MQV +++PD + L+AC++L + G+ +H
Sbjct: 507 VYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHA 566
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
Y + G ++ + L+DMYAK G I QV+ + N +++ M+ A+HG G E
Sbjct: 567 YSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEE 626
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
+ +F RM +RV+P+ +TF+++LS+C H G +++G F +M++ Y I P ++ Y CM+
Sbjct: 627 GIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCMV 685
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLL RAG L EA +L++ MP EA++ W +LL I+ +V LGE A + LI+LEP N+G
Sbjct: 686 DLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTG 745
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
NY +L+N+YA GRW++ K R++M D G++K PGCS+IE VH F+A D SH +
Sbjct: 746 NYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEE 805
Query: 475 LYQILCKINGQMKFAEH 491
+Y +L + ++ EH
Sbjct: 806 IYFMLDNLTKFIRIKEH 822
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 127/253 (50%), Gaps = 34/253 (13%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P+VY +N+ + L + A+ L+N++Q S+LRPD Y+ +L A KL+TI G++
Sbjct: 504 EPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQ 563
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H ++ G DSD H+ A L+ MYA C I +V++++S
Sbjct: 564 VHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS------------------- 604
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
N++ ++ YA E I +FRRM V+PD + L+ L
Sbjct: 605 --------------NPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVL 650
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-V 276
S+C G++++G +E Y + + ++D+ +++GK+ +A Q+ +NM ++
Sbjct: 651 SSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADS 710
Query: 277 ITWTTMIAGLALH 289
+TW+ ++ G +H
Sbjct: 711 VTWSALLGGCFIH 723
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 183/375 (48%), Gaps = 16/375 (4%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D + FP VL L +ELGR++H + G ++V+V ALI MY C + +A+KV
Sbjct: 133 DFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVL 192
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQ 190
+ ++ + + WN+++ G + A L E M E NV++W+ +I G++
Sbjct: 193 EGMTQK--DCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAY 250
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
E++ LF RM V PD + + L AC+++ + +G+ +H YI ++ L + + NA
Sbjct: 251 DVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANA 310
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
L+ MY + G + A ++F K ++ TMI G +G +A ++F +ME+ V+ +
Sbjct: 311 LVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERD 370
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
I++ ++S + + F + GIEP G ++ +++ +++
Sbjct: 371 RISWNCMISGHVDNFMFDDALMLFRDLLME-GIEPDSFTLGSILTGFADMTCIRQGKEIH 429
Query: 371 R---RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 427
++N+ + G+L+ D+ + A ++ ++ + L + YA
Sbjct: 430 SIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFD---EISERDTSTWNALISGYA--- 483
Query: 428 RWNESGKIRKVMRDM 442
R N+ GKIR+++ M
Sbjct: 484 RCNQIGKIRELVERM 498
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 198/425 (46%), Gaps = 45/425 (10%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P+V ++ I + +V L+ ++ + + PD + VL A ++ + +G+E
Sbjct: 232 EPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKE 291
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H V L S+ V AL+ MY C + A K+F + + + A +NTM+ GY +
Sbjct: 292 LHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKC--AASYNTMIVGYLEN 349
Query: 158 GDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
G++ A+ LF M E++ ISW +I+G+ ++A+ LFR + +E ++PD +
Sbjct: 350 GNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTL 409
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGL-----------------NTIVPLN-------- 248
+ L+ A + + G+ IH+ GL N I+
Sbjct: 410 GSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISE 469
Query: 249 ------NALIDMYAKSGKIGKALQVFENMKNK----SVITWTTMIAGLALHGLGREALDM 298
NALI YA+ +IGK ++ E MK+ +V TW +++AGL + A+ +
Sbjct: 470 RDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQL 529
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F+ M+ + ++P+ T IL+AC + + G++ + R G + ++D+
Sbjct: 530 FNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQ-VHAYSIRAGYDSDAHIGATLVDMYA 588
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI--KLEPHNSGNY 416
+ G ++ ++ ++ N ++L A ++G E G + ++ ++ P +
Sbjct: 589 KCGSIKHCYQVYNKIS-NPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFL 647
Query: 417 AILSN 421
++LS+
Sbjct: 648 SVLSS 652
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
+++ LG+++H ++ TG + V L+QMY+ DA +FD+++L
Sbjct: 45 NSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTL---------- 94
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV--K 207
KN+ SWT ++ + M + LF + + K
Sbjct: 95 -----------------------KNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEK 131
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D L+ C LG +ELG +H + ++G T V + NALIDMY K G + +A +V
Sbjct: 132 LDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKV 191
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
E M K ++W ++I +G+ EALD+ M + ++PN +T+ A++
Sbjct: 192 LEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGG 244
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 36/263 (13%)
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
++ LG+ +H++ + G + L+ MY+ + A +F+ M K++ +WT A
Sbjct: 46 SLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWT---A 102
Query: 285 GLALH---GLGREALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
L LH GL + +F + K + F +L+ CC +G +ELGR+ M
Sbjct: 103 VLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHG-MVL 161
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA----SNIYGDV 395
++G + +ID+ G+ G L EA+K+L M + + W S++ A +Y +
Sbjct: 162 KHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMT-QKDCVSWNSIITACVANGVVYEAL 220
Query: 396 ELGECALQHLIKLEPHNSGNYAIL----SNIYAILGRWNESGKIRKVMRDMGVKK----- 446
+L E L L +LEP+ A++ SN Y + ES ++ M GV
Sbjct: 221 DLLENML--LSELEPNVVTWSAVIGGFSSNAYDV-----ESVELFARMVGAGVAPDARTL 273
Query: 447 ---MPGCS---YIEVSKRVHEFV 463
+P CS ++ V K +H ++
Sbjct: 274 ASVLPACSRMKWLFVGKELHGYI 296
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G D + H+ + +D + G + Y ++ S P++ +N + A + +
Sbjct: 569 IRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGI 628
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+++ ++ S +RPD+ +F VL + V +I++G E
Sbjct: 629 VIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYE 664
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 265/463 (57%), Gaps = 35/463 (7%)
Query: 31 SIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI--QASALRPDNYSFPFVLKAVVK 88
++F P + YN+ I+AL + ++ +A + RP+ ++ F LKA
Sbjct: 79 TLFDQIPDPTAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFALKACAA 138
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ GR++H Q + GL++ +V L+ +YA C+ + AR VFD ++ VA W+
Sbjct: 139 VPAPGEGRQLHAQALRQGLEASAYVQTGLLNLYAKCEQVALARTVFDGMAPDKSLVA-WS 197
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
M+ GY++VG + EA+ LFR MQ V+P
Sbjct: 198 AMINGYSRVGMV-------------------------------TEALGLFREMQAVGVEP 226
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
DE+ M+ +SACA+ GA++LG+W+H YI++ G+ + L+ ALIDMYAK G I +A VF
Sbjct: 227 DEVTMVGVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVF 286
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M K W+ MI G A+HGL +AL +FSRM +V+PN +TFI +LSAC H GLV+
Sbjct: 287 DAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVD 346
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GRRY++IM++ GI+P +E YGCMIDLL R+G L +A + MP N+ IW +LL A
Sbjct: 347 DGRRYWSIMQN-LGIKPSMENYGCMIDLLCRSGLLDDAYSFVIDMPISPNSIIWRTLLVA 405
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
+++ E A + L++LEPHN NY +LSN+ A +W+ +RK M+D V +
Sbjct: 406 CKSSNRIDIAESASKRLLELEPHNPENYVLLSNLCASNSQWDRVSYLRKKMKDSNVTAVA 465
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
GCS IE++ +HEFV D SHP+ + +L +I +++ A H
Sbjct: 466 GCSSIEINGYLHEFVVSDDSHPEIKEIRLVLREIADRVRRAGH 508
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 292/540 (54%), Gaps = 83/540 (15%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSDYAYS--IFTH-KSKPDVYLYNTTIKALCQT--DNP 57
+ + + NHLLS+ S+ D+ YS IF+H P+ Y +N ++A T D P
Sbjct: 46 IHSIHKPNHLLSQ------SISLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYP 99
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA- 116
L + LY++++ + P+N++FPFV A L I + R HC+ GLD+D H V +
Sbjct: 100 L-TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSM 158
Query: 117 ------------------------------LIQMYASCKCIYDARKVF-----------D 135
L+ YA +A +VF D
Sbjct: 159 VTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPD 218
Query: 136 ELSLRV---------------W------------NVAVWNTMVAGYAKVGDLNNARALFE 168
E+SL W N + + +++ Y+K G+L ++R +F+
Sbjct: 219 EMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFD 278
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
M ++ I+W I+ YAQ +EAI+LF M+ V P+++ + A LSACA +GA++L
Sbjct: 279 GMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
G+ + Y GL + + ALIDMYAK G + A +VF +M K+ +W MI+ LA
Sbjct: 339 GKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALAS 398
Query: 289 HGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
HG +EAL +F RM E +PN+ITF+++LSAC H GLV+ G R F++M + +G+ PK
Sbjct: 399 HGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 458
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
IE Y CM+DLL RAG+L EA ++ +MP + + G+L +A +V++GE +Q L+
Sbjct: 459 IEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLL 518
Query: 407 KLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
+L+P NSGNY I S IY L W+++ ++R +MR+ GV K PGCS+IEV ++ EF++GD
Sbjct: 519 ELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 32/275 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ RG+ N+++ S I S G + IF D +N I A Q A
Sbjct: 245 VVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEA 304
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L++ ++ + + P+ + VL A + ++LG+++ GL D+ V ALI M
Sbjct: 305 ISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A++VF+++ + N A WN M++ A G A +LFE M+++
Sbjct: 365 YAKCGSLESAQRVFNDMPRK--NDASWNAMISALASHGKAKEALSLFERMSDE------- 415
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-Y 239
G A +P++I ++ LSAC G V+ G + + + +
Sbjct: 416 --GGSA--------------------RPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLF 453
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
GL + + ++D+ +++G + +A V E M K
Sbjct: 454 GLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 284/497 (57%), Gaps = 10/497 (2%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIF----THKSKPDVYLYNTTIKALCQTDNPLN 59
R D++ + S I S LG + A +F + +P++ +N +
Sbjct: 164 RMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDE 223
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV ++ + PD + VL AV L + +G ++H + GL SD VV+A++
Sbjct: 224 AVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLD 283
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF----ELMTEKNV 175
MY C C+ + +VFDE+ + N + G ++ G ++ A +F + E NV
Sbjct: 284 MYGKCGCVKEMSRVFDEV--EEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNV 341
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++WT++IA +Q + EA+ LFR MQ V+P+ + + + + AC + A+ G+ IH +
Sbjct: 342 VTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCF 401
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G+ V + +ALIDMYAK G+I A + F+ M ++++W ++ G A+HG +E
Sbjct: 402 SLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKET 461
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
++MF M ++ KP+ +TF +LSAC GL E G R +N M +GIEPK+E Y C++
Sbjct: 462 MEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVT 521
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LL R G L+EA +++ MPFE +A +WG+LL++ ++ ++ LGE A + L LEP N GN
Sbjct: 522 LLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGN 581
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA G W+E +IR+VM+ G++K PG S+IEV +VH +AGD SHP +
Sbjct: 582 YILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDI 641
Query: 476 YQILCKINGQMKFAEHL 492
+ L K+N QMK + +L
Sbjct: 642 LEKLDKLNMQMKKSGYL 658
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 203/420 (48%), Gaps = 43/420 (10%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L F + SL + ++ +H P ++ +++ I A ++ + + + ++ + L
Sbjct: 41 LLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRL 100
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD + P +K+ L ++ G+++H +G +D V ++L MY C I DARK
Sbjct: 101 IPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARK 160
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQM 188
+FD + R +V VW+ M+AGY+++G + A+ LF M E N++SW ++AG+
Sbjct: 161 LFDRMPDR--DVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNN 218
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+EA+ +FR M V+ PD + L A L V +G +H Y+ + GL + +
Sbjct: 219 GFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVV 278
Query: 249 NALIDMYAK-------------------------------SGKIGKALQVFENMKNK--- 274
+A++DMY K +G + AL+VF K++
Sbjct: 279 SAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKME 338
Query: 275 -SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+V+TWT++IA + +G EAL++F M+ V+PN +T +++ AC ++ + G+
Sbjct: 339 LNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKE- 397
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ R GI + +ID+ + G +Q A + +M N W +++ ++G
Sbjct: 398 IHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMS-ALNLVSWNAVMKGYAMHG 456
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 268/471 (56%), Gaps = 1/471 (0%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I + LG D A+ + H +V + I + AV +N + + + PD
Sbjct: 178 ISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDE 237
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ +L A +L + GR +H G+ +V ALI MYA C I A +VFD
Sbjct: 238 VTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDA 297
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
L R WN M+ GY K+G ++ AR LF+ M +++++++ +LI GY + EA+
Sbjct: 298 LG-RGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALL 356
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LF +M+ +++ D M++ L+ACA LGA+ G +H IEQ + + L AL+DMY
Sbjct: 357 LFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYL 416
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G++ +A VF+ M + V TW+ MIAGLA +G+G+ AL+ F M+ +PN +T+IA
Sbjct: 417 KCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIA 476
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
IL+AC H L++ GR YF M+ + I P IE YGCMIDLLGR+G L EA L+R MP +
Sbjct: 477 ILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQ 536
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
NA IW S+L+A ++ D L A +HL+KLEP Y L NIY +W ++ +IR
Sbjct: 537 PNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIR 596
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
++M + GVKK G S I V+ +VH+F+ D +HP + ++ +I ++K
Sbjct: 597 RLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLK 647
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 225/452 (49%), Gaps = 48/452 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKP-DVYLYNTTIKALCQ-TDNPLNAVILYNKI 67
+HLL+ ++ + Y++ P +L++T ++A + + P + +ILY ++
Sbjct: 35 SHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTALRACFRASSGPESPLILYRRM 94
Query: 68 QASALRPDNYSFPFVLKAVVK-LSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCK 125
+ + + D ++F F+ K + + + L + +H T L S V +V+ +I MY
Sbjct: 95 RRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELG 154
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
DAR+ FD++ ++ + W T+++G AK+G L++A L +NVISWT LI+GY
Sbjct: 155 LAGDARRAFDDIPVK--DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGY 212
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
++ + EA+ F M + ++PDE+ ++ LSACAQL + G +H + + G+
Sbjct: 213 SRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSG 272
Query: 246 PLNNALIDMYAKSGKIGKALQV--------------------------------FENMKN 273
L ALIDMYAK G IG+A +V F+ M++
Sbjct: 273 KLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMED 332
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+ ++T+ ++I G G REAL +F +M R ++ + T +++L+AC +G + GR
Sbjct: 333 RDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRAL 392
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
++ R +E I ++D+ + G ++EA + + M + W +++A G
Sbjct: 393 HACIEQRL-VEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVR-DVHTWSAMIAGLAFNG 450
Query: 394 DVELGECALQHLI-----KLEPHNSGNYAILS 420
+G+ AL++ +P++ AIL+
Sbjct: 451 ---MGKAALEYFFWMKVDGFQPNSVTYIAILT 479
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 261/459 (56%), Gaps = 34/459 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F SK +V +N I A Q + NA+ + + ++P++ +F +L
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ELG+ +H + GL+SD+HV AL+ M+ +C
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC------------------------ 562
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
GDL +A+ LF M +++++SW T+IAG+ Q + A F+ MQ +KP
Sbjct: 563 ---------GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D+I L+ACA A+ G +H I + + V + LI MY K G I A QVF
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ K+V +WT+MI G A HG G+EAL++F +M++ VKP+ ITF+ LSAC H GL+E
Sbjct: 674 HKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIE 733
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G +F MK + IEP++E YGCM+DL GRAG L EA + + +M E ++ +WG+LL A
Sbjct: 734 EGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
++ +VEL E A Q ++L+P+++G + ILSNIYA G W E K+RKVM D GV K P
Sbjct: 793 CQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKP 852
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G S+IEV +VH F + D +HP + ++ L +++ +M+
Sbjct: 853 GQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR 891
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 221/401 (55%), Gaps = 16/401 (3%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+PD++++NT I + N ++A +++ ++ D YS+ +L V+ E +
Sbjct: 142 QPDIFMWNTLINMYAKCGNTISAKQIFDDMR----EKDVYSWNLLLGGYVQHGLYEEAFK 197
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW--NTMVAGYA 155
+H Q V + D +++ A + + R++++ + W+ ++ ++ +
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
K GD+ +A +F+ + +++++WT++I G A+ + +A LF+RM+ E V+PD++A ++
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L AC A+E G+ +H +++ G +T + + A++ MY K G + AL+VF+ +K ++
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V++WT MIAG A HG EA F++M + ++PN +TF++IL AC ++ G++ +
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437
Query: 336 -IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
I+++ YG + ++ ++ + + G L++A ++ ++ + N W +++ A +
Sbjct: 438 HIIEAGYGSDDRVRT--ALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQ 494
Query: 395 VELGECALQHLIK--LEPHNSGNYAIL----SNIYAILGRW 429
+ Q L+K ++P++S +IL S+ LG+W
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKW 535
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 175/309 (56%), Gaps = 6/309 (1%)
Query: 115 AALIQMYASCKCIYDARKVFDEL--SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
+AL+Q+ K + D ++++ + S ++ +WNT++ YAK G+ +A+ +F+ M E
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMRE 173
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
K+V SW L+ GY Q EA L +M ++VKPD+ ++ L+ACA V+ G +
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGREL 233
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
+N I + G +T + + ALI+M+ K G IG A +VF+N+ + ++TWT+MI GLA HG
Sbjct: 234 YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRF 293
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
++A ++F RME V+P+++ F+++L AC H +E G++ MK G + +I
Sbjct: 294 KQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTA 352
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEP 410
++ + + G +++A ++ + N W +++A +G ++ +I+ +EP
Sbjct: 353 ILSMYTKCGSMEDALEVFDLVKGR-NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 411 HNSGNYAIL 419
+ +IL
Sbjct: 412 NRVTFMSIL 420
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 181/389 (46%), Gaps = 35/389 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D ++ + + + G + A +F +V + I Q A + +
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
NK+ S + P+ +F +L A S ++ G++I + G SD V AL+ MYA C
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G L +A +FE ++++NV++W +I
Sbjct: 462 ---------------------------------GSLKDAHRVFEKISKQNVVAWNAMITA 488
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y Q +Q + A+ F+ + E +KP+ + L+ C ++ELG+W+H I + GL +
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ ++NAL+ M+ G + A +F +M + +++W T+IAG HG + A D F M+
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ +KP++ITF +L+AC + GRR ++ + + + +I + + G ++
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALI-TEAAFDCDVLVGTGLISMYTKCGSIE 667
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+A ++ ++P + N W S++ +G
Sbjct: 668 DAHQVFHKLP-KKNVYSWTSMITGYAQHG 695
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 36/316 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + H+ + + + G A ++F K D+ +NT I Q A +
Sbjct: 544 GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF 603
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q S ++PD +F +L A + GR +H D DV V LI MY C
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKC 663
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G + +A +F + +KNV SWT++I G
Sbjct: 664 ---------------------------------GSIEDAHQVFHKLPKKNVYSWTSMITG 690
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ + EA+ LF +MQ E VKPD I + ALSACA G +E G ++++ +
Sbjct: 691 YAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPR 750
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ ++D++ ++G + +A++ M+ W ++ +H L E + ++ +
Sbjct: 751 MEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVH-LNVELAEKAAQ-K 808
Query: 304 RARVKPNEITFIAILS 319
+ + PN+ ILS
Sbjct: 809 KLELDPNDNGVFVILS 824
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 2/204 (0%)
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
Q NEA+ + R+ +++ A L C + + GE I+N+I++ G+ + + N
Sbjct: 90 QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWN 149
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
LI+MYAK G A Q+F++M+ K V +W ++ G HGL EA + +M + VKP
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++ TF+++L+AC V+ GR +N++ + G + + +I++ + G + +A K+
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLI-LKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 370 LRRMPFEANAAIWGSLLAASNIYG 393
+P + W S++ +G
Sbjct: 269 FDNLPTR-DLVTWTSMITGLARHG 291
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 280/489 (57%), Gaps = 40/489 (8%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL ++ S + +C S G DYA SIF +P + +NT ++ + N A+I
Sbjct: 15 GLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALI 74
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
Y ++ ++PDN+++P +LKA +L +E G ++H + GL++DV V +LI M
Sbjct: 75 TYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISM-- 132
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
Y K G++ A+FE M E++V SW+ LI
Sbjct: 133 -------------------------------YGKCGEIGVCCAVFEQMNERSVASWSALI 161
Query: 183 AGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--Y 239
+A + ++ + L M E + +E +++ LSAC LGA++LG +H ++ +
Sbjct: 162 TAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVS 221
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GLN IV +LI+MY K G + K + +F+ M K+ ++++ MI+GLA+HG GRE L +F
Sbjct: 222 GLNVIV--ETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIF 279
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+ M ++P++I ++ +L+AC H GLV+ G + FN MK +GIEP I+ YGCM+DL+GR
Sbjct: 280 TEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGR 339
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG + EA +L++ MP E N +W SLL+AS ++ +++ GE A + L KL+ + +Y +L
Sbjct: 340 AGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVL 399
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SN+YA RW + + R M G+ + PG S +EV +++H FV+ D HP + +Y++L
Sbjct: 400 SNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEML 459
Query: 480 CKINGQMKF 488
++ Q+KF
Sbjct: 460 YQMEWQLKF 468
>gi|449498539|ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 264/458 (57%), Gaps = 34/458 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I++ L + + FI++C L A+ FTH KP V++ N+ I+A + P
Sbjct: 35 LILQNLHSHPLIAHHFINTCHHLHLLGSAFLFFTHIPKPHVFICNSLIRAFSHSKIPHTP 94
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY + +++ P+NY+FPFVLK++ + G+ +H V +G SD++V L+ +
Sbjct: 95 LFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSVHTHVVKSGHASDLYVQNTLMDV 154
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YASC + +KVFDE+ +V W ++ GY R F L
Sbjct: 155 YASCGKMGLCKKVFDEMLHT--DVVSWTILIMGY---------RVSFML----------- 192
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
++A+ +F +MQ V P+ + ++ AL+ACA GA+E+G WIH +++
Sbjct: 193 -----------DDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKR 241
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
V L ALIDMY K G+I +AL VF+ MK K+V TW I GLA G EA+ F
Sbjct: 242 WEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFK 301
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYF-NIMKSRYGIEPKIEQYGCMIDLLGR 359
RM+ V+ +++T +A+LSAC H GLV GR+ F +++ R+G P I+ Y CM+D+L R
Sbjct: 302 RMDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILAR 361
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G ++EA ++ MPFEA ++WGSLL S +G +E+ E A + L+++EP N G Y +L
Sbjct: 362 NGCIEEACVMINDMPFEATRSMWGSLLTGSRAHGSLEVSEIAARKLVEMEPENGGYYVVL 421
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
SNIYA +G+W+E K+R++M++ G+KK G S +E+ +
Sbjct: 422 SNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQE 459
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 248/394 (62%), Gaps = 5/394 (1%)
Query: 113 VVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
V +L+++Y S + AR+V + +V WNTMV+GY K GDL AR +F M E
Sbjct: 115 VTNSLLKLYCSLGLLDRARRVLYSGGAAL-DVVSWNTMVSGYGKGGDLGAAREVFARMPE 173
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
+N++SW+ ++ + + EA+ +F RM E +PD + +++ L ACA LGAVE G W+
Sbjct: 174 RNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWV 233
Query: 233 HNYIEQY---GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
H Y+E G + L AL+DMY K G + A QVF+ + + V+ W MI GLA++
Sbjct: 234 HRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMN 293
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G G AL++F RM + PNE TFIA+L AC H G V+ G+R F M+ YGI+P+ E
Sbjct: 294 GYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREH 352
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
YGC+ DLLGRAG ++EAE LL MP E +A+ WG+L+++ ++ D+ +GE + LI+LE
Sbjct: 353 YGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELE 412
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
P++ G Y +L N+YA+ GRW E+ IR++M D G KK G S+IE++ VHEF++GDT H
Sbjct: 413 PYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRH 472
Query: 470 PDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
P ++Y +L I +++ ++++ +++ D
Sbjct: 473 PLTRKIYALLEDIERRLQLIGYVKDTSQVIMDMD 506
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 39/266 (14%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + ++ ++ + A + A+ +++++ RPD VLKA
Sbjct: 164 AREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAH 223
Query: 89 LSTIELGREIH----CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
L +E GR +H + G G ++ + AL+ MY C C+ DA +VFD + R +V
Sbjct: 224 LGAVERGRWVHRYLETGSFG-GRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRR--DV 280
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+WN M+ G A + GY + A+ LFRRM +
Sbjct: 281 VLWNAMIGGLA--------------------------MNGYGE-----RALELFRRMLQK 309
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
P+E +A L AC G V+ G+ + ++ YG+ L D+ ++G + +A
Sbjct: 310 GFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEA 369
Query: 265 LQVFENMK-NKSVITWTTMIAGLALH 289
+ +M W +++ +H
Sbjct: 370 EALLLDMPMEPHASQWGALMSSCQMH 395
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 265/466 (56%), Gaps = 14/466 (3%)
Query: 38 KPDVYL-YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR 96
+P L +N+ ++AL + P + + + L PDNYSF F+++A L+
Sbjct: 151 RPATLLAHNSLLRALARGRRPH---LAFGAFRDLPLAPDNYSFTFLVRAATALAAAAASA 207
Query: 97 --------EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+H + G D HV + + MYA+ + + +V
Sbjct: 208 LDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDV--GAARAAFAEIASPDVVCVT 265
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
MV A G+ + AR LF+ M +++ ++W +IAGY + EA+ LF M+
Sbjct: 266 AMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAV 325
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
E+ +++AL+ACAQLGA+E G+W+H+ G+ V L ALIDMY+K G + A++VF
Sbjct: 326 GEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 385
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
++M ++V TWT+ ++GLA++G+GR+ L +F RME V+PN +TF+ +L C GLV+
Sbjct: 386 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVD 445
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR F+ MKS +GI+P +E YGCM+DL GRAG L +A + MP E + +WG+LL A
Sbjct: 446 EGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNA 505
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S I+ +VELG+ A+ L+ +E N + +LSNIYA W +R +M+ GVKK+P
Sbjct: 506 SRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVP 565
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
GCS IEV +VHEF G +HP + +L ++N +++ ++ N
Sbjct: 566 GCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIAN 611
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
++ + + ++ G +D A +F + D +N I T A+ L+++++ +
Sbjct: 264 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 323
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+ L A +L +E G+ +H G+ V + ALI MY+ C + A +
Sbjct: 324 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 383
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD + R NV W + V+G A G
Sbjct: 384 VFDSMGER--NVYTWTSAVSGLAMNG-------------------------------MGR 410
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNAL 251
+ + LF+RM+ V+P+ + + L C+ G V+ G + ++ +G++ + +
Sbjct: 411 DCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCM 470
Query: 252 IDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
+D+Y ++G++ A+ M W ++ +H LG+ A+D +E
Sbjct: 471 VDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE 526
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 274/498 (55%), Gaps = 6/498 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G D + + + I+ G S A +F K D+ +N I Q + A
Sbjct: 233 IVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEA 292
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY K+ + +F +L A + + GR +H + GLDS+V V AL+ M
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG---DLNNARALFELMTEKNVIS 177
YA C + +ARKVF+ + R + W+T++ YA G D AR +F+ + ++ I
Sbjct: 353 YAKCGSLEEARKVFNAMKNR--DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTIC 410
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
W +I Y Q A+ +FR M +KPD + +A L ACA LG + + +H I
Sbjct: 411 WNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ L + V + N LI+MYA+ G + +A ++F K K+V++WT M+A + +G EAL
Sbjct: 471 SESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEAL 530
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
D+F M+ VKP+++T+ +IL C H G +E G RYF M +G+ P + + M+DL
Sbjct: 531 DLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDL 590
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR+G L +A++LL MPFE + W + L A I+G +ELGE A + + +L+P ++ Y
Sbjct: 591 LGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPY 650
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+SNIYA G W + +RK M + G+KK+PG S+IEV ++HEF +G HP D +
Sbjct: 651 IAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEIC 710
Query: 477 QILCKINGQMKFAEHLQN 494
+ L +++G M+ A ++ +
Sbjct: 711 EELTRLHGLMRAAGYVPD 728
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 196/425 (46%), Gaps = 73/425 (17%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD L + + + G A +F D +N I A Q+ + A+ ++
Sbjct: 137 GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ ++P++ ++ V+ + GR+IH + V G DSD+ V ALI MY C
Sbjct: 197 KEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKC 255
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
++AR+VFD++ R ++ WN M+ Y + GD
Sbjct: 256 GSSHEAREVFDKMKKR--DMVSWNVMIGCYVQNGDF------------------------ 289
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+EA+ L++++ +E K + ++ L AC+ + A+ G +H++I + GL++
Sbjct: 290 -------HEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSE 342
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG---REALDMFSR 301
V + AL++MYAK G + +A +VF MKN+ + W+T+I A +G G R+A +F R
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402
Query: 302 MER--------------------------------ARVKPNEITFIAILSACCHVG-LVE 328
+ A +KP+ +TFIA+L AC +G L E
Sbjct: 403 LGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE 462
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + I +S +E + +I++ R G L+EAE+L E W +++AA
Sbjct: 463 VKALHAQISESE--LESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAA 519
Query: 389 SNIYG 393
+ YG
Sbjct: 520 FSQYG 524
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
+V +N I A Q + A++LY ++ L D+ +F VL A S++ GREIH
Sbjct: 74 NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIH 130
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ +GLDS F L+ N +V YA+ G
Sbjct: 131 NRVFYSGLDS------------------------FQSLA---------NALVTMYARFGS 157
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+ +A+ +F+ + ++ SW +I ++Q + A+ +F+ M+ ++KP+ + +S
Sbjct: 158 VGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISG 216
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+ + G IH I G ++ + + ALI+MY K G +A +VF+ MK + +++W
Sbjct: 217 FSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW 276
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
MI +G EAL+++ +++ K + TF++IL AC V + GR + +
Sbjct: 277 NVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE 336
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 393
R G++ ++ ++++ + G L+EA K+ M +A W +L+ ASN YG
Sbjct: 337 R-GLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYG 390
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 139/301 (46%), Gaps = 36/301 (11%)
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+PDN +F VL + + GR +H + + + D V ALI MY C + DAR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF+ + R NV WN M+A YA+ G
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNG-------------------------------HST 92
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ L+ RM ++ + D + ++ L AC+ L G IHN + GL++ L NAL+
Sbjct: 93 EALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALV 149
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
MYA+ G +G A ++F++++ + +W +I + G AL +F M + +KPN
Sbjct: 150 TMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNST 208
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T+I ++S ++ GR+ + + G + + +I++ G+ G EA ++ +
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVAN-GFDSDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 373 M 373
M
Sbjct: 268 M 268
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/480 (36%), Positives = 263/480 (54%), Gaps = 34/480 (7%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
N H+L+ ++ + G A F + P + I A L A+ +
Sbjct: 109 NPHVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSA 168
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
AS +RPD+++ VL A +++ + G E+ G+ +V V A + +Y C
Sbjct: 169 FASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKC--- 225
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
G+++ AR +F+ M K+V++W ++ GYA
Sbjct: 226 ------------------------------GEMDKARGVFDKMKNKDVVAWGAMVGGYAS 255
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
P EA+ LF MQVE ++PD + ALSAC +LGA++LG + ++ + L
Sbjct: 256 NGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPVL 315
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
ALIDMYAK G G+A VF+ M+N+ +I W MI GL + G + A + +M+++ +
Sbjct: 316 GTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGM 375
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
N+ TFI +L +C H GLV+ GRRYF M Y I P+IE YG M+DLL RAG LQEA
Sbjct: 376 TLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEAH 435
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 427
+L++ MP EANA +WG+LL I+ + +L E L+ LI+LEP NSGNY +LSNIY+ G
Sbjct: 436 QLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLIQLEPWNSGNYVVLSNIYSNSG 495
Query: 428 RWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
RW ++ K+R M+ GV+K+P S++E+ +VHEF GD SHP D++Y L ++ +MK
Sbjct: 496 RWEDAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHVGDKSHPLSDQIYAKLDELGMEMK 555
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 113/287 (39%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N + + +D G D A +F DV + + +P A+ L+
Sbjct: 207 GIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELF 266
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q +RPD Y+ L A +L ++LGR + + + + ALI MYA C
Sbjct: 267 FAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKC 326
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+A VF ++ R ++ VWN M+ G G
Sbjct: 327 GSTGEAWMVFQKMRNR--DIIVWNAMILGLGMTG-------------------------- 358
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
A L +M+ + ++ + L +C G V+ G + N + Y +
Sbjct: 359 -----HEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRP 413
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALH 289
+ ++D+ +++G + +A Q+ ++M ++ + W ++ G +H
Sbjct: 414 RIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIH 460
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 261/433 (60%), Gaps = 4/433 (0%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S GF D A +F D+ + T I + + A+++Y + ++ P++
Sbjct: 275 SKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMV 334
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
++ + + G+++ V G D + + +I +YA+C I +A F S
Sbjct: 335 DLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKE 394
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
NVA WN ++AGY + ++ A LF M E++V SW+T+I+GY Q +QPN A+ LF +
Sbjct: 395 --NVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHK 452
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M +KP+E+ M++ LSA A G ++ G W H Y+ + L+ A+IDMYAK G
Sbjct: 453 MVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGS 512
Query: 261 IGKALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
I AL+VF ++ K +V W +I GLA+HG +L +FS +ER +K N ITFI +L
Sbjct: 513 INNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVL 572
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+ACCHVGLVE G+R+F MKS + I+P I+ YGCM+DLLGRAG L+EAE+++R MP +A+
Sbjct: 573 TACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKAD 632
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
IWG+LLAA +G+V++GE A ++L +LEP + + +LSN+YA G+W ++ +R+
Sbjct: 633 VVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRA 692
Query: 439 MRDMGVKKMPGCS 451
M+ ++++PG S
Sbjct: 693 MQSHRMQRLPGYS 705
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 202/420 (48%), Gaps = 39/420 (9%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N ++S ++ S G DYA +F Y T I Q + AV L+ +++
Sbjct: 136 NVMISGYVKS----GQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRN 191
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ P+ + ++ A I R +H + + V V L++MY C + +
Sbjct: 192 VGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVE 251
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR +FDE+ + N+ WN M+ GY+K G +++AR +FE + K++++W T+I GY +++
Sbjct: 252 ARALFDEMPEK--NIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVE 309
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------- 242
+ NEA+ ++R M +P+++ M+ +S C + A+ G+ + + + + G +
Sbjct: 310 RINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQS 369
Query: 243 TIVPLN------------------------NALIDMYAKSGKIGKALQVFENMKNKSVIT 278
TI+ L NALI Y ++ I +A+++F M + V +
Sbjct: 370 TIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFS 429
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W+TMI+G + AL++F +M + +KPNE+T +++LSA G ++ GR +
Sbjct: 430 WSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVH 489
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA-AIWGSLLAASNIYGDVEL 397
+ I +ID+ + G + A ++ + +A+ + W +++ ++G L
Sbjct: 490 NN-SITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANL 548
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 175/372 (47%), Gaps = 44/372 (11%)
Query: 53 QTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIEL----GREIHCQTVGTGLD 108
Q +NP + N + ++++ VL + +K + L G++IHC +GL
Sbjct: 42 QQENPF---LHLNSLLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLG 98
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
S+ + +LI MY C + DA+ +FD + +N M++GY K G L+ A LF+
Sbjct: 99 SNNFIQNSLINMYGKCGLLVDAKSIFDVCPRS--DPVSYNVMISGYVKSGQLDYACELFD 156
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
M K +S+TT+I G++Q + N+A+ LF++M+ V P+E+ + +SA + G +
Sbjct: 157 EMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWA 216
Query: 229 GEWIHNYI-----EQYGLNTIVPLN--------------------------NALIDMYAK 257
+H + E++ L + L N +++ Y+K
Sbjct: 217 CRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSK 276
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
+G + A VFE + NK ++TW T+I G EAL M+ M A +PN++ + +
Sbjct: 277 AGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDL 336
Query: 318 LSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+S C + G++ + ++K + I+ +I L G + EA L R+ +
Sbjct: 337 ISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQS--TIIHLYAACGRINEA-CLQFRIGSK 393
Query: 377 ANAAIWGSLLAA 388
N A W +L+A
Sbjct: 394 ENVASWNALIAG 405
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 265/466 (56%), Gaps = 14/466 (3%)
Query: 38 KPDVYL-YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR 96
+P L +N+ ++AL + P + + + L PDNYSF F+++A L+
Sbjct: 158 RPATLLAHNSLLRALARGRRPH---LAFGAFRDLPLAPDNYSFTFLVRAATALAAAAASA 214
Query: 97 --------EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+H + G D HV + + MYA+ + + +V
Sbjct: 215 LDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDV--GAARAAFAEIASPDVVCVT 272
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
MV A G+ + AR LF+ M +++ ++W +IAGY + EA+ LF M+
Sbjct: 273 AMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAV 332
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
E+ +++AL+ACAQLGA+E G+W+H+ G+ V L ALIDMY+K G + A++VF
Sbjct: 333 GEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 392
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
++M ++V TWT+ ++GLA++G+GR+ L +F RME V+PN +TF+ +L C GLV+
Sbjct: 393 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVD 452
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR F+ MKS +GI+P +E YGCM+DL GRAG L +A + MP E + +WG+LL A
Sbjct: 453 EGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNA 512
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S I+ +VELG+ A+ L+ +E N + +LSNIYA W +R +M+ GVKK+P
Sbjct: 513 SRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVP 572
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
GCS IEV +VHEF G +HP + +L ++N +++ ++ N
Sbjct: 573 GCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIAN 618
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
++ + + ++ G +D A +F + D +N I T A+ L+++++ +
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+ L A +L +E G+ +H G+ V + ALI MY+ C + A +
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD + R NV W + V+G A G
Sbjct: 391 VFDSMGER--NVYTWTSAVSGLAMNG-------------------------------MGR 417
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNAL 251
+ + LF+RM+ V+P+ + + L C+ G V+ G + ++ +G++ + +
Sbjct: 418 DCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCM 477
Query: 252 IDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
+D+Y ++G++ A+ M W ++ +H LG+ A+D +E
Sbjct: 478 VDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE 533
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 265/455 (58%), Gaps = 7/455 (1%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL-RPDNYSFPFVLKAVVKLSTIELGR 96
+P+V +N + L ++ +AV+ + L RPD L AV + + +G+
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQ 177
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
++H V G +D VV ALI MY C + +VFDE S +VA N ++AG ++
Sbjct: 178 QLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHM--DVASCNALIAGLSR 235
Query: 157 VGDLNNARALFELMTEK----NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
+ A LF+ ++ NV+SWT+++A Q + EA+ FR MQ + +P+ +
Sbjct: 236 NAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVT 295
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ L A A + A+ G H + + G V +++AL+DMYAK G++ A +F+ M
Sbjct: 296 IPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMV 355
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+++V++W MI G A++G A+ MF M + + KP+ +TF +L+AC GL E GR
Sbjct: 356 SRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRH 415
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
YF M + YG+ P++E Y CM+ LLGRAG L EA L+ MPFE +A IWGSLL + ++
Sbjct: 416 YFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVH 475
Query: 393 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY 452
G+V+L E A + L LEP N+GNY +LSNIYA W+ ++R++M+D+G+KK GCS+
Sbjct: 476 GNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSW 535
Query: 453 IEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
IE+ +VH +AGD SHP + + + ++N QM+
Sbjct: 536 IEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMR 570
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 160/373 (42%), Gaps = 46/373 (12%)
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L++ ++ + PD + P K+ T+ L R +H +GL D V ++L+ Y
Sbjct: 7 LHHFLRHVSFPPDPHLLPTAFKSC---PTLPLARALHAVAEVSGLARDPFVASSLLHAYL 63
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM-----TEKNVIS 177
+AR +FD + V W+ +VA +A GD A L E M E NVI+
Sbjct: 64 RLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVIT 123
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
W L++G + + +A+ M E ++PD + ALSA +G V +G+ +H Y
Sbjct: 124 WNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYA 183
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---------------------- 274
+ G + ALIDMY K G+ + ++VF+ +
Sbjct: 184 VKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEAL 243
Query: 275 -------------SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+V++WT+++A +G EA++ F M+ +PN +T +L A
Sbjct: 244 RLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAF 303
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
+V + GR + R G + ++D+ + G +++A + M N
Sbjct: 304 ANVAALMHGRSA-HCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTM-VSRNVVS 361
Query: 382 WGSLLAASNIYGD 394
W +++ +YG+
Sbjct: 362 WNAMIGGYAMYGE 374
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/483 (36%), Positives = 263/483 (54%), Gaps = 40/483 (8%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L F C G A +F DV + I +T A+ L+ K+
Sbjct: 146 LLHFYSVCGKWG---GAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDVV-- 200
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P+ +F VL A ++ + +G+ +H + V AL+ MY C+C
Sbjct: 201 -PNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCEC------ 253
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
L AR LF+ + +++++SWT++I+G Q QP
Sbjct: 254 ---------------------------LCEARKLFDELPDRDIVSWTSIISGLVQCKQPK 286
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
+++ LF MQ+ V+PD I + + LSACA LGA++ G W+ YIE+ G+ + + AL+
Sbjct: 287 DSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALV 346
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G I AL +F + N+++ TW ++ GLA+HG G EAL F M A ++PNE+
Sbjct: 347 DMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEV 406
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
TF+AIL+ACCH GLV GR YF M S+ + P++E YGCMIDLL RAG L EA K +R
Sbjct: 407 TFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIR 466
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP + IWG+LL+A G+VEL + L HL++L+ +SG Y +LSNIYA RW++
Sbjct: 467 NMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDD 526
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
++R++M+D G++K PG S IEV HEF+ GDT+H + ++ +L + Q+ H
Sbjct: 527 VTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQVYLEGH 586
Query: 492 LQN 494
Sbjct: 587 FST 589
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 202/410 (49%), Gaps = 49/410 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSS-LGFSDYAYSIFTHKSKPDVYL----YNTTIKALCQTD 55
+I GL + +LS+ + +GF DYA+ ++ D+++ YNT I A +
Sbjct: 28 LIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFL---NQTDLHVGTLPYNTLIAAYASSC 84
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
P A ++Y +I + PD Y+FP VLKA K ++ G ++H V G D++V
Sbjct: 85 TPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQN 144
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+L+ Y+ C G A +F+ M ++V
Sbjct: 145 SLLHFYSVC---------------------------------GKWGGAGRVFDEMLVRDV 171
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT LI+GY + +EAI LF +M +V P+ ++ L AC ++G + +G+ +H
Sbjct: 172 VSWTGLISGYVRTGLFDEAINLFLKM---DVVPNVATFVSVLVACGRMGYLSMGKGVHGL 228
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + + + NAL+DMY K + +A ++F+ + ++ +++WT++I+GL +++
Sbjct: 229 VYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDS 288
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L++F M+ + V+P+ I ++LSAC +G ++ G R+ R GIE I ++D
Sbjct: 289 LELFYDMQISGVEPDRIILTSVLSACASLGALDYG-RWVQEYIERQGIEWDIHIGTALVD 347
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ + G ++ A + +P N W +LL ++G G AL+H
Sbjct: 348 MYAKCGCIEMALHIFNGIP-NRNIFTWNALLGGLAMHGH---GHEALKHF 393
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 270/500 (54%), Gaps = 44/500 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD-----YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPL 58
GL + ++R + C+ G YA +F P DV YNT ++ +
Sbjct: 57 GLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGWGG 116
Query: 59 ----NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
A ++ ++ + PD Y+F +LKA E GR+ H V G +V
Sbjct: 117 GCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
LI MYA C GD+ AR +F+ M +
Sbjct: 177 PTLINMYAEC---------------------------------GDVRAARVMFDRMDGEC 203
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V+S+ +I + P EA+ LFR MQ + +KP + +++ LSACA LGA+ELG WIH+
Sbjct: 204 VVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHD 263
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
YI + L+++V +N ALIDMYAK G + A+ VF++M+++ W+ M+ A HG GRE
Sbjct: 264 YIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGRE 323
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ MF M++ +KP+++TF+ +L AC H G+V G +YF+ M+ YGI I+ YGC+
Sbjct: 324 AISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVT 382
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLL R+G L+ A K + +P + A +W +LL+A +GDV++G+ + +++L+ + G
Sbjct: 383 DLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGG 442
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
+Y I SN+ A GRW E +RK+M + GV K+PGCS IE+ VHEF AGD SHP
Sbjct: 443 DYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQE 502
Query: 475 LYQILCKINGQMKFAEHLQN 494
+++ ++ Q+K ++ N
Sbjct: 503 ARRMVDEVIEQLKLVGYVPN 522
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 266/478 (55%), Gaps = 33/478 (6%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
ID + G + A IF + +V ++ I A A+ L+ + +S + PD
Sbjct: 173 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 232
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ +L A L +++GR IH GLD D V AAL+ MY C+
Sbjct: 233 ITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR----------- 281
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
++ +AR LF+ M E+++++WT +I GYA+ NE++
Sbjct: 282 ----------------------EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 319
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LF +M+ E V PD++AM+ + ACA+LGA+ I +YI++ V L A+IDM+A
Sbjct: 320 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 379
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G + A ++F+ M+ K+VI+W+ MIA HG GR+ALD+F M R+ + PN+IT ++
Sbjct: 380 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 439
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L AC H GLVE G R+F++M Y + ++ Y C++DLLGRAG L EA KL+ M E
Sbjct: 440 LLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVE 499
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
+ +WG+ L A + DV L E A L++L+P N G+Y +LSNIYA GRW + K R
Sbjct: 500 KDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTR 559
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
+M +KK+PG ++IEV + H+F GDT+HP +Y++L + +++ ++ +
Sbjct: 560 DLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPD 617
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 187/343 (54%), Gaps = 39/343 (11%)
Query: 48 IKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL 107
+ + + +N + ++ RPDNY+ PFV++A L +++GR IH GL
Sbjct: 2 VGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 61
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
D D V AAL+ MY C+ ++ +AR LF
Sbjct: 62 DLDHFVCAALVDMYVKCR---------------------------------EIEDARFLF 88
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
+ M E+++++WT +I GYA+ + NE++ LF +M+ E V PD++AM+ + ACA+LGA+
Sbjct: 89 DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMH 148
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
I +YI++ V L A+IDMYAK G + A ++F+ M+ K+VI+W+ MIA
Sbjct: 149 KARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 208
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
HG GR+ALD+F M + + P++IT ++L AC + +++GR +I+ ++G++ +
Sbjct: 209 YHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIV-YKFGLD--L 265
Query: 348 EQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + C ++D+ G+ +++A L +MP E + W ++
Sbjct: 266 DHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGG 307
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 183/389 (47%), Gaps = 35/389 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD ++ + + +D + A +F + D+ + I + +++L+
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K++ + PD + V+ A KL + R ++ IQ
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKAR----------------IIDDYIQ----- 158
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
RK F +V + M+ YAK G + +AR +F+ M EKNVISW+ +IA
Sbjct: 159 ------RKKFQ------LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 206
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y Q +A+ LFR M + PD+I + + L AC+ L +++G IH+ + ++GL+
Sbjct: 207 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLD 266
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ AL+DMY K +I A +F+ M + ++TWT MI G A G E+L +F +M
Sbjct: 267 HFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMRE 326
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V P+++ + ++ AC +G + R + ++ R + + MID+ + G ++
Sbjct: 327 EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ-RKKFQLDVILGTAMIDMHAKCGCVE 385
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
A ++ RM E N W +++AA +G
Sbjct: 386 SAREIFDRME-EKNVISWSAMIAAYGYHG 413
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 2/213 (0%)
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
++ G+A++ FR + +PD + + AC L +++G IH+ + ++G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L+ + AL+DMY K +I A +F+ M+ + ++TWT MI G A G E+L +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+M V P+++ + ++ AC +G + R + ++ R + + MID+ +
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ-RKKFQLDVILGTAMIDMYAKC 179
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G ++ A ++ RM E N W +++AA +G
Sbjct: 180 GCVESAREIFDRME-EKNVISWSAMIAAYGYHG 211
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 257/438 (58%), Gaps = 33/438 (7%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+PD+ +N + Q + A+ + ++ + + P+ + L A ++ ++LG+E
Sbjct: 461 EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
IH + ++ V +ALI MY+ C + A VF EL
Sbjct: 521 IHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSEL-------------------- 560
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
+ ++V+ W ++I+ AQ + A+ L R M + NV+ + + M++AL
Sbjct: 561 -------------STRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSAL 607
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
AC++L A+ G+ IH +I + GL+T + N+LIDMY + G I K+ ++F+ M + ++
Sbjct: 608 PACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 667
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+W MI+ +HG G +A+++F + +KPN ITF +LSAC H GL+E G +YF +M
Sbjct: 668 SWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
K+ Y ++P +EQY CM+DLL RAG E + + +MPFE NAA+WGSLL A I+ + +L
Sbjct: 728 KTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDL 787
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
E A ++L +LEP +SGNY +++NIY+ GRW ++ KIR +M++ GV K PGCS+IEV +
Sbjct: 788 AEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847
Query: 458 RVHEFVAGDTSHPDFDRL 475
++H FV GDTSHP +++
Sbjct: 848 KLHSFVVGDTSHPLMEQI 865
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 237/519 (45%), Gaps = 63/519 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G+D L SR ++ G + A +F S+ +V+ + ++ C +
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEET 174
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ + +RPD++ FP V KA +L +G++++ + G + + V +++ M
Sbjct: 175 IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDM 234
Query: 121 YASCKCIYDARKVFDELSLR---VWNVAV------------------------------W 147
+ C + AR+ F+E+ + +WN+ V W
Sbjct: 235 FIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW 294
Query: 148 NTMVAGYAKVGDLNNARALFELMT-----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
N +++GYA+ G A F M + NV+SWT LIAG Q EA+++FR+M
Sbjct: 295 NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMV 354
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKI 261
+E VKP+ I + +A+SAC L + G IH Y I+ L++ + + N+L+D YAK +
Sbjct: 355 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 414
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A + F +K +++W M+AG AL G EA+++ S M+ ++P+ IT+ +++
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL---QEAEKLLRRMPFEAN 378
G + +F M S G++P + G+ L +E + R E +
Sbjct: 475 TQYGDGKAALEFFQRMHS-MGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS 533
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ +L++ +Y + E A +L ++ + + ++I + + S +
Sbjct: 534 TGVGSALIS---MYSGCDSLEVACSVFSEL---STRDVVVWNSIISACAQSGRSVNALDL 587
Query: 439 MRDMG-----------VKKMPGCSYIEV---SKRVHEFV 463
+R+M V +P CS + K +H+F+
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L+ KL + LG ++H Q V G+D + + L+++Y C+ DA
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA----------- 143
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
R +F+ M+E+NV SWT ++ Y + E I LF M
Sbjct: 144 ----------------------RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E V+PD AC++L +G+ +++Y+ G + +++DM+ K G++
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 241
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A + FE ++ K V W M++G G ++AL S M+ + VKP+++T+ AI+S
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
G E +YF M +P + + +I + GY EA + R+M E
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
>gi|125532120|gb|EAY78685.1| hypothetical protein OsI_33787 [Oryza sativa Indica Group]
Length = 493
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 266/425 (62%), Gaps = 11/425 (2%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL-DSDVHVVAALIQMYASCKCIYDARK 132
P + +FPF+ +A +L++ L R +H Q + GL D+HV +L+ MYA+C AR+
Sbjct: 60 PSHLTFPFLARAAARLASPRLARAVHAQPLRRGLLPQDLHVSNSLVHMYAACALPGLARR 119
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FDE+ N WN ++ GYAK DL AR +F M +++V+SW+ +I G + +
Sbjct: 120 LFDEIPRP--NHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHR 177
Query: 193 EAITLFRRMQV-----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
EA+ +F M+ + V+ +++ M++ L ACA LG + G +H Y+E++G + L
Sbjct: 178 EALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRL 237
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKS--VITWTTMIAGLALHGLGREALDMFSRMERA 305
+L+DMYAK G I +AL+VF + +S V+ W +I GLA+HG+ RE+L MF +ME A
Sbjct: 238 ATSLVDMYAKCGAIVEALEVFHAVPVESTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHA 297
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
V P+EIT++ +LSAC H GLV+ R+F ++++ + P +E Y C++D+LGRAG L+E
Sbjct: 298 GVVPDEITYLCLLSACVHGGLVDEAWRFFRSLEAQR-LRPHVEHYACLVDVLGRAGRLEE 356
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A +++ MP + + ++ G+LL A +I+G VELGE + L+ L+P + G Y LSNIYA+
Sbjct: 357 AYGVVKSMPMKPSVSVLGALLNACHIHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAV 416
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
RW E+ K RKVM + GVKK+PG S I+V + + F+A D +HP +Y +L I
Sbjct: 417 ARRWQEAKKARKVMEERGVKKVPGFSEIDVGRGLCRFIAQDKTHPGSAEIYALLKLIAMD 476
Query: 486 MKFAE 490
MK E
Sbjct: 477 MKMKE 481
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 179/488 (36%), Positives = 266/488 (54%), Gaps = 10/488 (2%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L HL + + + +LG S +A +F + +A + A+ L+
Sbjct: 42 LHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQ 101
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIEL----GREIHCQTVGTGLDSDVHVVAALIQMY 121
+ A PDN + VL A + GR +H V G++ DV V LI++Y
Sbjct: 102 DMIADGFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVY 161
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ AR+VFD + + + WNTMV Y + D+ A LF M ++V+SW T+
Sbjct: 162 GERGEMTVARRVFDSMPTK--STIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTV 219
Query: 182 IAGYAQMDQPNEAITLFRRMQVEN---VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
IAGY + + EA+ LFR+M + V P+ M LSACA G +E G W+H YI++
Sbjct: 220 IAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDK 279
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALD 297
+N L+ LIDMYAK G I KALQVFE K + +WTT+I GLA+HG + L
Sbjct: 280 NQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLR 339
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MFS M+ + + P+++TF+ +L+AC H GLV+ G +F M+ +Y I PKIE YGCMIDLL
Sbjct: 340 MFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLL 399
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GR G L EA ++++ MP + N IWG+ L+A ++ VELGE A + +L+P +
Sbjct: 400 GRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARV 459
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
++S++YA W+ + R+ M + +KK PGCS + + VHEFVAG HP +
Sbjct: 460 MMSSMYAKAQDWSGLARERREMNSLQMKKTPGCSSVALDGEVHEFVAGGNQHPLCAEICS 519
Query: 478 ILCKINGQ 485
+L + Q
Sbjct: 520 VLETVEAQ 527
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 274/506 (54%), Gaps = 67/506 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV G +++H ++ I+ S D A S+F P L+N+ I+A ++ A
Sbjct: 75 IIVSGF-KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEA 133
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +Y +C GL+ DV + A L+ M
Sbjct: 134 LEMY----------------------------------YCMVEKGGLERDVFIGAGLVDM 159
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ + AR+VFD++ R +V WN M+AG ++ D AR +F+ M +++ +SW T
Sbjct: 160 YSKMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGT 217
Query: 181 LIAGYA------------------------------QMDQPNEAITLFRRMQVENVKPDE 210
++AGYA Q EAI+ F +M++EN P+
Sbjct: 218 MMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 277
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ ++ L A A L A G H I Q G + + N+LIDMYAK G++ + ++F
Sbjct: 278 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNE 337
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M +K ++W M++G A+HG G A+ +FS M+ ++V+ + ++F+++LSAC H GLVE G
Sbjct: 338 MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEG 397
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
R+ F+ M +Y I+P +E Y CM+DLLGRAG E ++ MP E +A +WG+LL +
Sbjct: 398 RKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCR 457
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
++ +V+LGE AL HL+KLEP N ++ +LS+IYA GRW ++GK R M D+G+KK PGC
Sbjct: 458 MHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGC 517
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLY 476
S++E+ +VH F GD SHP + ++
Sbjct: 518 SWVELKNKVHAFRVGDKSHPQLESMH 543
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 284/495 (57%), Gaps = 10/495 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR N ++S + + G S+ + + +P++ + + + + + +
Sbjct: 196 MAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVET 255
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ + + VL V L+ + G+ IH V G ++ + V +LI +
Sbjct: 256 MELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICL 315
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF-EL-------MTE 172
Y + AR +F L ++ N+ WN +++ YA +G + A A+F +L M
Sbjct: 316 YGKHGNVNAARILF--LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
NV+SW+ +I G+A Q EA+ LFRRMQ+ VK + + + + LS CA+L A+ LG I
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H ++ + ++ + + N LI+MY KSG + VFE ++NK +I+W TM+AG +HGLG
Sbjct: 434 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 493
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
A+ F +M + +P+ +TF+A+LSAC H GLV GR F+ M + +EP++E Y C
Sbjct: 494 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLLGRAG LQEA K+++ MP E NA +WG+LL + ++ + E+ E + L
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEI 613
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
+G+Y +LSNIYA GRW +S K+R + G+KK PG S+I+V K+V+ F AG+T H +
Sbjct: 614 AGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAEL 673
Query: 473 DRLYQILCKINGQMK 487
+ +Y+IL + QM+
Sbjct: 674 EEVYRILKDLGLQME 688
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 228/474 (48%), Gaps = 64/474 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP-----DVYLYNTTIKALCQTD 55
+IV G ++ L +R + + G A +F + P ++ L+N+ ++A
Sbjct: 57 IIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF--EVSPIECFSNLLLWNSILRANVAHG 114
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A+ +Y +++ + D ++FP V++A + + +L R +H V G ++HV
Sbjct: 115 YCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGN 174
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----T 171
L+ MY + DARKVF+ +++R + WNTMV+GYA D + A +F +M
Sbjct: 175 ELMGMYGKIGRMDDARKVFERMAVR--SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGL 232
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
E N+++WT+L++ +A+ Q E + LF RM++ + A+ LS L A + G+
Sbjct: 233 EPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 292
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK----------------- 274
IH Y+ + G + + N+LI +Y K G + A +F +K K
Sbjct: 293 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGW 352
Query: 275 ----------------------SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
+V++W+ +I G A G G EAL++F RM+ A+VK N +
Sbjct: 353 CDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSV 412
Query: 313 TFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
T ++LS C + + LGR + ++++S ++ I +I++ ++G +E +
Sbjct: 413 TIASVLSVCAELAALHLGREIHGHVVRSL--MDGNILVGNGLINMYTKSGSFKEGNLVFE 470
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQ---HLIK--LEPHNSGNYAILS 420
++ + W +++A I+G LGE A++ +IK EP A+LS
Sbjct: 471 KIE-NKDLISWNTMVAGYGIHG---LGENAIRTFDQMIKDGFEPDGVTFVAVLS 520
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 32/254 (12%)
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+P+N F + + S L ++IH Q + TG + A ++ +YA + DA++
Sbjct: 28 QPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQR 87
Query: 133 VFDELSLRVW-NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF+ + + N+ +WN+++ RA + GY +
Sbjct: 88 VFEVSPIECFSNLLLWNSIL------------RA--------------NVAHGYCE---- 117
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA+ ++ RM+ V D + ACA +G+ +L +H ++ + G + + N L
Sbjct: 118 -EALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNEL 176
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+ MY K G++ A +VFE M +S ++W TM++G AL+ A +MF M A ++PN
Sbjct: 177 MGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNL 236
Query: 312 ITFIAILSACCHVG 325
+T+ ++LS+ G
Sbjct: 237 VTWTSLLSSHARCG 250
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 222 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVIT 278
Q L + IH+ I G + L ++ +YA G + A +VFE + +++
Sbjct: 43 QCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLL 102
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +++ HG EAL+++ RM + V + TF ++ AC +G +L R +
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHV- 161
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G + + ++ + G+ G + +A K+ RM + + W ++++
Sbjct: 162 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS-WNTMVSG 210
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 255/460 (55%), Gaps = 33/460 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + D +N I A Q N + L+ + + PD +++ VLKA
Sbjct: 432 ACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSS 491
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ G EIH + + +GL D V ALI MY CKC
Sbjct: 492 QQALNSGMEIHNRIIKSGLGLDSFVGGALIDMY--CKC---------------------- 527
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G + A+ + + + ++ ++SW +IAG+ + +A + F M +VKP
Sbjct: 528 ---------GMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKP 578
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D L ACA L +V LG+ IH I + L++ V + + L+DMY+K G + + VF
Sbjct: 579 DNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVF 638
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E NK +TW MI G A HGLG EAL F RM+ V+PN TF++IL AC H+G ++
Sbjct: 639 EKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFID 698
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G YFN M + YG+EP+IE Y CMID++GR+G + EA KL++ MPFEA+A IW +LL+
Sbjct: 699 KGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSI 758
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I+G++E+ E A +++LEP +S +LSNIYA G W + ++RK+MR +KK P
Sbjct: 759 CKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEP 818
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
GCS+IEV VH F+ G+ +HP ++ +Y+IL + +MK+
Sbjct: 819 GCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKW 858
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 162/299 (54%), Gaps = 6/299 (2%)
Query: 78 SFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL 137
+F +++ ++++ G++ H + + +G DV++ L++MY C + A KVF+++
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
S R +V +NTM++GYA G++N A F +++V+SW ++++G+ Q + ++I +
Sbjct: 105 SQR--DVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDV 162
Query: 198 FRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
F M + E V D+ L AC+ L LG +H I + G V +AL+DMYA
Sbjct: 163 FLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYA 222
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K ++ +L++F + K+ + W+ +IAG + L++F M++ + ++ + +
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282
Query: 317 ILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+ +C + +++G + + + +K +G + + +D+ + G L +A+++ +P
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGT--ATLDMYAKCGSLADAQRIFNSLP 339
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 172/396 (43%), Gaps = 41/396 (10%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF K + YN I + + A+ + + S L + S A
Sbjct: 331 AQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACAS 390
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ GR++H +V + L S N+ V N
Sbjct: 391 IKGDLDGRQLHSLSVKSTLRS---------------------------------NICVAN 417
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+++ Y K L+ A +F+ M ++ +SW +IA + Q E + LF M ++P
Sbjct: 418 SILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEP 477
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D+ + L AC+ A+ G IHN I + GL + ALIDMY K G I +A ++
Sbjct: 478 DQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIH 537
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ ++ +++++W +IAG L +A F M + VKP+ T+ +L AC ++ V
Sbjct: 538 DRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVG 597
Query: 329 LGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
LG++ + I+K + + ++D+ + G +Q++ + + P + W +++
Sbjct: 598 LGKQIHGQIIKLE--LHSDVYITSTLVDMYSKCGNMQDSALVFEKAP-NKDFVTWNAMIC 654
Query: 388 ASNIYGDVELGECALQHLIKLEPHN-SGNYAILSNI 422
+G LGE AL + +++ N N+A +I
Sbjct: 655 GYAQHG---LGEEALGYFERMQLENVRPNHATFVSI 687
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 141/292 (48%), Gaps = 35/292 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL ++ + ID G + A I + + +N I + +A
Sbjct: 505 IIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDA 564
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ +++PDN+++ VL A L+++ LG++IH Q + L SDV++ + L+ M
Sbjct: 565 HSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDM 624
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ K G++ ++ +FE K+ ++W
Sbjct: 625 YS---------------------------------KCGNMQDSALVFEKAPNKDFVTWNA 651
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
+I GYAQ EA+ F RMQ+ENV+P+ ++ L ACA +G ++ G + + + +Y
Sbjct: 652 MICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEY 711
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
GL + + +ID+ +SG+I +AL++ + M ++ + W T+++ +HG
Sbjct: 712 GLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHG 763
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 208/515 (40%), Gaps = 87/515 (16%)
Query: 1 MIVRGLDQNNHL---LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQT--- 54
MIV G + ++ L + CS L +YAY +F S+ DV YNT I
Sbjct: 69 MIVSGFIPDVYISNCLMKMYLRCSHL---NYAYKVFEKMSQRDVISYNTMISGYADAGEM 125
Query: 55 --------DNPLNAVILYNKIQASALRP---------------------DNYSFPFVLKA 85
D P V+ +N + + L+ D +F VLKA
Sbjct: 126 NLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKA 185
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
L LG ++H V G DV +AL+ MYA CK + D+ K+F E+ ++ W
Sbjct: 186 CSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNW--- 242
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
+ W+ +IAG Q D+ + LF+ MQ
Sbjct: 243 ------------------------------VCWSAIIAGCVQNDEHILGLELFKEMQKVG 272
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+ + + +CA L A+++G +H + + + + + A +DMYAK G + A
Sbjct: 273 IGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQ 332
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
++F ++ S+ + +I G + G EAL F + ++ + NEI+ SAC +
Sbjct: 333 RIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIK 392
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+L R + + + + I ++D+ G+ L EA + M +A W ++
Sbjct: 393 -GDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME-RRDAVSWNAV 450
Query: 386 LAASNIYGDVE--LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI--RKVMRD 441
+AA G+ E L A +++EP + Y + + N +I R +
Sbjct: 451 IAAHEQNGNEEETLNLFASMLRLRMEP-DQFTYGSVLKACSSQQALNSGMEIHNRIIKSG 509
Query: 442 MGVKKMPG---------CSYIEVSKRVHEFVAGDT 467
+G+ G C IE +K++H+ + T
Sbjct: 510 LGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQT 544
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 180/396 (45%), Gaps = 40/396 (10%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D + IF+ + ++ I Q D + + L+ ++Q + + V ++
Sbjct: 228 DDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSC 287
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
LS +++G ++H + SD+ V A + MYA C
Sbjct: 288 AGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKC---------------------- 325
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
G L +A+ +F + + ++ + +I G + ++ EA+ F+ + +
Sbjct: 326 -----------GSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGL 374
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+EI++ A SACA + G +H+ + L + + + N+++DMY K + +A
Sbjct: 375 GFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACC 434
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F+ M+ + ++W +IA +G E L++F+ M R R++P++ T+ ++L AC
Sbjct: 435 MFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQA 494
Query: 327 VELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ G N I+KS G++ + G +ID+ + G ++EA+K+ R+ + W ++
Sbjct: 495 LNSGMEIHNRIIKSGLGLDSFVG--GALIDMYCKCGMIEEAKKIHDRIE-QQTMVSWNAI 551
Query: 386 LAASNIYGDVELGECALQHLIKL--EPHNSGNYAIL 419
+A + E ++K+ +P N YAI+
Sbjct: 552 IAGFTLLKHSEDAHSFFYEMLKMSVKPDNF-TYAIV 586
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 265/466 (56%), Gaps = 14/466 (3%)
Query: 38 KPDVYL-YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR 96
+P L +N+ ++AL + P + + + L PDNYSF F+++A L+
Sbjct: 158 RPATLLAHNSLLRALARGRRPH---LAFGAFRDLPLVPDNYSFTFLVRAATALAAAAASA 214
Query: 97 --------EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+H + G D HV + + MYA+ + + +V
Sbjct: 215 LDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDV--GAARAAFAEIASPDVVCVT 272
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
MV A G+ + AR LF+ M +++ ++W +IAGY + EA+ LF M+
Sbjct: 273 AMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAV 332
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
E+ +++AL+ACAQLGA+E G+W+H+ G+ V L ALIDMY+K G + A++VF
Sbjct: 333 GEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 392
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
++M ++V TWT+ ++GLA++G+GR+ L +F RME V+PN +TF+ +L C GLV+
Sbjct: 393 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVD 452
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR F+ MKS +GI+P +E YGCM+DL GRAG L +A + MP E + +WG+LL A
Sbjct: 453 EGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNA 512
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S I+ +VELG+ A+ L+ +E N + +LSNIYA W +R +M+ GVKK+P
Sbjct: 513 SRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVP 572
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
GCS IEV +VHEF G +HP + +L ++N +++ ++ N
Sbjct: 573 GCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIAN 618
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
++ + + ++ G +D A +F + D +N I T A+ L+++++ +
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+ L A +L +E G+ +H G+ V + ALI MY+ C + A +
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD + R NV W + V+G A G
Sbjct: 391 VFDSMGER--NVYTWTSAVSGLAMNG-------------------------------MGR 417
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNAL 251
+ + LF+RM+ V+P+ + + L C+ G V+ G + ++ +G++ + +
Sbjct: 418 DCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCM 477
Query: 252 IDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
+D+Y ++G++ A+ M W ++ +H LG+ A+D +E
Sbjct: 478 VDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE 533
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 267/468 (57%), Gaps = 37/468 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDN---PLNAVILYNK-IQASALRPDNYSFPFVL 83
YA ++F +P + YN+ I+AL + V++Y + ++A + P++++ F L
Sbjct: 76 YARNLFDQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFAL 135
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
KA + + GR++H Q GL+ +V L+ +YA C+ + AR VFD +
Sbjct: 136 KACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGM------ 189
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
VGD KN+ +W+ +I GY+++ NEA+ LFR MQ
Sbjct: 190 -------------VGD-------------KNLAAWSAMIGGYSRVGMVNEALGLFREMQA 223
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+V PDE+ M++ +SACA+ GA++LG W+H +I++ G+ + L+ ALIDMYAK G I +
Sbjct: 224 ADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIER 283
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF+ M + W+ MI GLA+HGL AL +FSRM +V+PN +TFI +LSAC H
Sbjct: 284 AKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAH 343
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV GRRY++ M+ GI+P +E YGCM+DL R+ L EA + M N+ IW
Sbjct: 344 SGLVNEGRRYWSTMQ-ELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWR 402
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL AS ++ + A + L++LEP N NY +LSN+YA +W+ +RK M++
Sbjct: 403 TLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENN 462
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
V + GCS IE++ +H+FV D SHP+ + +L +I ++ A H
Sbjct: 463 VNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGH 510
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 281/493 (56%), Gaps = 39/493 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G DQ+ L ++ I+ LG D A +F + +Y++N +AL +
Sbjct: 104 LVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKEL 163
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVV--KLSTIEL--GREIHCQTVGTGLDSDVHVVAA 116
+ LY ++ D +++ +VLKA V +LS L G+EIH + G ++++HV+
Sbjct: 164 LDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTT 223
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ +Y AK G ++ A ++F M KN +
Sbjct: 224 LLDVY---------------------------------AKFGSVSYANSVFCAMPTKNFV 250
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVE--NVKPDEIAMLAALSACAQLGAVELGEWIHN 234
SW+ +IA +A+ + P +A+ LF+ M E N P+ + M+ L ACA L A+E G+ IH
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHG 310
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
YI + L++I+P+ NALI MY + G++ +VF+NMK + V++W ++I+ +HG G++
Sbjct: 311 YILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKK 370
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ +F M V P+ I+FI +L AC H GLVE G+ F M S+Y I P +E Y CM+
Sbjct: 371 AIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 430
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRA L EA KL+ M FE +WGSLL + I+ +VEL E A L +LEP N+G
Sbjct: 431 DLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAG 490
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
NY +L++IYA W+E+ + K++ G++K+PGCS+IEV ++V+ FV+ D +P +
Sbjct: 491 NYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEE 550
Query: 475 LYQILCKINGQMK 487
++ +L K++ +MK
Sbjct: 551 IHALLVKLSNEMK 563
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P + + +CAQ ++ G +H + G + L LI+MY + G I +AL+V
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ + +++ W + LA+ G G+E LD++ +M + T+ +L AC L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 328 ELGRRYFNIMKS---RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
R + + R+G E I ++D+ + G + A + MP + N W +
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWSA 254
Query: 385 LLA 387
++A
Sbjct: 255 MIA 257
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 265/460 (57%), Gaps = 38/460 (8%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+PD+ +N + Q + A+ + ++ + + P+ + L A ++ ++LG+E
Sbjct: 461 EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
IH + ++ V +ALI MY+ C + A VF EL
Sbjct: 521 IHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSEL-------------------- 560
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
+ ++V+ W ++I+ AQ + A+ L R M + NV+ + + M++AL
Sbjct: 561 -------------STRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSAL 607
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
AC++L A+ G+ IH +I + GL+T + N+LIDMY + G I K+ ++F+ M + ++
Sbjct: 608 PACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 667
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+W MI+ +HG G +A+++F +KPN ITF +LSAC H GL+E G +YF +M
Sbjct: 668 SWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
K+ Y ++P +EQY CM+DLL RAG E + + +MPFE NAA+WGSLL A I+ + +L
Sbjct: 728 KTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDL 787
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
E A ++L +LEP +SGNY +++NIY+ GRW ++ KIR +M++ GV K PGCS+IEV +
Sbjct: 788 AEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847
Query: 458 RVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 497
++H FV GDTSHP L + + +G++ E + EFS
Sbjct: 848 KLHSFVVGDTSHP----LMEQISGKDGKLDVDED-EKEFS 882
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 237/519 (45%), Gaps = 63/519 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G+D L SR ++ G + A +F S+ +V+ + ++ C +
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEET 174
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ + +RPD++ FP V KA +L +G++++ + G + + V +++ M
Sbjct: 175 IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDM 234
Query: 121 YASCKCIYDARKVFDELSLR---VWNVAV------------------------------W 147
+ C + AR+ F+E+ + +WN+ V W
Sbjct: 235 FIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW 294
Query: 148 NTMVAGYAKVGDLNNARALFELMT-----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
N +++GYA+ G A F M + NV+SWT LIAG Q EA+++FR+M
Sbjct: 295 NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMV 354
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKI 261
+E VKP+ I + +A+SAC L + G IH Y I+ L++ + + N+L+D YAK +
Sbjct: 355 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 414
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A + F +K +++W M+AG AL G EA+++ S M+ ++P+ IT+ +++
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL---QEAEKLLRRMPFEAN 378
G + +F M S G++P + G+ L +E + R E +
Sbjct: 475 TQYGDGKAALEFFQRMHS-MGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS 533
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ +L++ +Y + E A +L ++ + + ++I + + S +
Sbjct: 534 TGVGSALIS---MYSGCDSLEVACSVFSEL---STRDVVVWNSIISACAQSGRSVNALDL 587
Query: 439 MRDMG-----------VKKMPGCSYIEV---SKRVHEFV 463
+R+M V +P CS + K +H+F+
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L+ KL + LG ++H Q V G+D + + L+++Y C+ DA
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA----------- 143
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
R +F+ M+E+NV SWT ++ Y + E I LF M
Sbjct: 144 ----------------------RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E V+PD AC++L +G+ +++Y+ G + +++DM+ K G++
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 241
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A + FE ++ K V W M++G G ++AL S M+ + VKP+++T+ AI+S
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
G E +YF M +P + + +I + GY EA + R+M E
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 179/494 (36%), Positives = 282/494 (57%), Gaps = 13/494 (2%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S +D S G +YA S+F + +N+ I Q A+ ++ ++ +
Sbjct: 190 SALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVE 249
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARK 132
PD + V+ A +S I+ G++IH + V +D+ + AL+ MYA C I +AR
Sbjct: 250 PDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARI 309
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD + +R +V +MV+GYAK + AR +F M K+VI+W LIAG Q +
Sbjct: 310 IFDMMPIR--SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENE 367
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE------QYGLNTIVP 246
EA+ LFR ++ E+V P L+ACA L ++LG H+++ QYG ++ V
Sbjct: 368 EALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVF 427
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G + +VF++M K ++W MI G A +G G +AL++F +M +
Sbjct: 428 VGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESG 487
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
P+ +T I +L AC H GL++ GR YF M +++G+ P + Y CM+DLLGRAGYL+EA
Sbjct: 488 EAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEA 547
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ L+ M + +A +WGSLLAA ++ +++LGE ++ L++++P NSG Y +LSN+YA
Sbjct: 548 KNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAEN 607
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
W ++RK+MR GV K PGCS+IE+ ++ F+ D H +Y +L I QM
Sbjct: 608 RDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQM 667
Query: 487 KFAEHL----QNEF 496
K A ++ NEF
Sbjct: 668 KQAGYVPYVGSNEF 681
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 160/315 (50%), Gaps = 2/315 (0%)
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
L ++ L D+ F +L + + +H + + S+ + LI +Y
Sbjct: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C C+ ARK+FD + R N+ WN+++ + K G L++A +FE M + + SW ++I
Sbjct: 66 KCGCVDVARKLFDRMLER--NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMI 123
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+G+ Q + +EA+ F +M +E + +ALSACA L ++LG IH+ + +
Sbjct: 124 SGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYL 183
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ V + +AL+DMY+K G++ A VF+ M +S ++W ++I +G EAL +F M
Sbjct: 184 SDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM 243
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ V+P+E+T +++SAC + ++ G++ + + ++D+ +
Sbjct: 244 IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNR 303
Query: 363 LQEAEKLLRRMPFEA 377
+ EA + MP +
Sbjct: 304 INEARIIFDMMPIRS 318
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 197/436 (45%), Gaps = 77/436 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ R + N ++ F S GF D A IF + D +N+ I Q A
Sbjct: 80 MLERNIFSWNSIICAFTKS----GFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEA 135
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ + ++ + YSF L A L ++LG +IH + SDV++ +AL+ M
Sbjct: 136 LVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDM 195
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + A+ VFDE+++R + WN+++ Y + G +
Sbjct: 196 YSKCGRVEYAQSVFDEMTVR--SRVSWNSLITCYEQNGPV-------------------- 233
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+EA+ +F M V+PDE+ + + +SACA + A++ G+ IH + +
Sbjct: 234 -----------DEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCD 282
Query: 241 -LNTIVPLNNALIDMYAKSGKIGKALQVFE------------------------------ 269
+ L NAL+DMYAK +I +A +F+
Sbjct: 283 EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMF 342
Query: 270 -NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
NM K VITW +IAG +G EAL +F ++R V P TF +L+AC ++ ++
Sbjct: 343 SNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQ 402
Query: 329 LGRR-YFNIMKS----RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
LGR+ + +++K +YG + + +ID+ + G ++ ++ + M E + W
Sbjct: 403 LGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM-LEKDCVSWN 461
Query: 384 SLLA--ASNIYGDVEL 397
+++ A N +G+ L
Sbjct: 462 AMIVGYAQNGFGNKAL 477
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 164/433 (37%), Positives = 259/433 (59%), Gaps = 6/433 (1%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD----VHVV 114
+A+ L+ K++ ++ D ++ V+ A LG+++H + L+ D + V
Sbjct: 272 DALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVG 331
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
LI +Y + ARK+F E+ ++ ++ WNT+++GY G + A++ F M EKN
Sbjct: 332 NTLITLYWKYGKVDGARKIFYEMPVK--DIITWNTLLSGYVNAGRMEEAKSFFAQMPEKN 389
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+++WT +I+G AQ +A+ LF +M+++ +P++ A A++AC+ LGA+E G +H
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHA 449
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
I G ++ + + NA+I MYA+ G + A +F M ++W +MIA L HG G +
Sbjct: 450 QIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVK 509
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A++++ +M + + P+ TF+ +LSAC H GLVE G RYFN M YGI P + Y MI
Sbjct: 510 AIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMI 569
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DL RAG +A+ ++ MPFEA A IW +LLA +G+++LG A + L KL P + G
Sbjct: 570 DLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDG 629
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y +LSN+YA LGRWN+ + RK+MRD GVKK P CS+ EV +VH F+ DT HP+
Sbjct: 630 TYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLS 689
Query: 475 LYQILCKINGQMK 487
+Y L K+N +MK
Sbjct: 690 IYNYLEKLNLEMK 702
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 205/427 (48%), Gaps = 51/427 (11%)
Query: 14 SRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+ I + S+LG A IF T D YN I ++ +A+ L+ ++ +
Sbjct: 83 TTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWAN 142
Query: 72 LRPDNYSFPFVLKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASC------ 124
+PD+++F VL A + E ++H V G++ V+ AL+ +Y C
Sbjct: 143 FQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLV 202
Query: 125 ---KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ ARK+FDE+ R N +W T++ GY + GDL AR + + MTE+ I+W +
Sbjct: 203 SSSSLMASARKLFDEMPKR--NEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAM 260
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+GY +A+TLFR+M++ V+ DE + +SACA G LG+ +H YI + L
Sbjct: 261 ISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNEL 320
Query: 242 NT----IVPLNNALIDMYAKSGKIGKALQV------------------------------ 267
N ++ + N LI +Y K GK+ A ++
Sbjct: 321 NPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKS 380
Query: 268 -FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
F M K+++TWT MI+GLA +G G +AL +F++M+ +PN+ F ++AC +G
Sbjct: 381 FFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGA 440
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+E GR+ + G + + MI + R G ++ A + MPF + W S++
Sbjct: 441 LENGRQ-LHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMI 498
Query: 387 AASNIYG 393
AA +G
Sbjct: 499 AALGQHG 505
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 51/347 (14%)
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
LS+ L R +H + +G H+V LI +Y ARK+FDE+ +V
Sbjct: 26 LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQP--DVIART 83
Query: 149 TMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
T++ Y+ +G+L AR +F + ++ + + +I GY+ M+ + AI LFR M+ N
Sbjct: 84 TLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANF 143
Query: 207 KPDEIAMLAALSACAQL--GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------- 257
+PD+ + LSA + + G+ +H + ++G+ + NAL+ +Y K
Sbjct: 144 QPDDFTFASVLSASTLIFYDERQCGQ-MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLV 202
Query: 258 ---------------------------------SGKIGKALQVFENMKNKSVITWTTMIA 284
+G + A ++ + M + I W MI+
Sbjct: 203 SSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMIS 262
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGI 343
G HGL +AL +F +M V+ +E T+ +++SAC G LG++ + I+K+
Sbjct: 263 GYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNP 322
Query: 344 EPK--IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + +I L + G + A K+ MP + + W +LL+
Sbjct: 323 DRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSG 368
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 137/307 (44%), Gaps = 42/307 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M V+ + N LLS ++++ G + A S F + ++ + I L Q A
Sbjct: 354 MPVKDIITWNTLLSGYVNA----GRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQA 409
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+N+++ P++Y+F + A L +E GR++H Q V G DS + V A+I M
Sbjct: 410 LKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITM 469
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + AR +F L++ + WN+M
Sbjct: 470 YARCGIVEAARTMF--LTMPFVDPVSWNSM------------------------------ 497
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
IA Q +AI L+ +M E + PD L LSAC+ G VE G + ++ +E Y
Sbjct: 498 -IAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENY 556
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG---LGREA 295
G+ +ID++ ++GK A V ++M ++ W ++AG HG LG EA
Sbjct: 557 GIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEA 616
Query: 296 LDMFSRM 302
+ ++
Sbjct: 617 AEKLFKL 623
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 7/191 (3%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A ++F D +N+ I AL Q + + A+ LY ++ + PD +F VL
Sbjct: 474 GIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVL 533
Query: 84 KAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
A +E G R + G+ A +I ++ DA+ V D +
Sbjct: 534 SACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEA- 592
Query: 143 NVAVWNTMVAGYAKVGDLN----NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
+W ++AG G+++ A LF+L+ + + ++ L YA + + N+
Sbjct: 593 RAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDG-TYVLLSNMYASLGRWNDVARTR 651
Query: 199 RRMQVENVKPD 209
+ M+ VK +
Sbjct: 652 KLMRDRGVKKE 662
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 276/489 (56%), Gaps = 39/489 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G DQ+ L ++ I+ S L D A +F K +Y++N +AL + + LY
Sbjct: 99 GFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELY 158
Query: 65 NKIQASALRPDNYSFPFVLKAVVK----LSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ + D +++ ++LKA V +S ++ G+EIH + G + VHV+ L+ M
Sbjct: 159 PRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDM 218
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA + G ++ A A+F+ M KNV+SW+
Sbjct: 219 YA---------------------------------RFGCVSYASAVFDEMPVKNVVSWSA 245
Query: 181 LIAGYAQMDQPNEAITLFRRMQV--ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+IA YA+ +P EA+ LFR M + + P+ + M++ L ACA A+E G+ IH YI +
Sbjct: 246 MIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILR 305
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL++I+P+ +ALI MYA+ GK+ +F+ M K V+ W ++I+ LHG GR+A+ +
Sbjct: 306 RGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKI 365
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M P+ I+FI++L AC H GLVE G++ F M +GI+P +E Y CM+DLLG
Sbjct: 366 FEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLG 425
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RA L EA K++ + E +WGSLL A I+ VEL E A + L KLEP N+GNY +
Sbjct: 426 RANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVL 485
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L++IYA W+E +++K++ ++K+PG S+IEV ++++ F + D +P ++L+ +
Sbjct: 486 LADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHAL 545
Query: 479 LCKINGQMK 487
L ++ +MK
Sbjct: 546 LVNLSNEMK 554
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+H + G + L LI+M+++ + A +VF+ + +++ W + LAL G
Sbjct: 91 VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
Query: 292 GREALDMFSRMERARVKPNEITFIAILSAC----CHVGLVELGRR-YFNIMKSRYGIEPK 346
G + L+++ RM V + T+ +L AC C V ++ G+ + +I++ YG
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH-- 208
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ ++D+ R G + A + MP + N W +++A
Sbjct: 209 VHVMTTLMDMYARFGCVSYASAVFDEMPVK-NVVSWSAMIA 248
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ RGLD ++S I + G + IF K DV L+N+ I + A
Sbjct: 303 ILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKA 362
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQ 119
+ ++ ++ P + SF VL A +E G+++ V G+ V A ++
Sbjct: 363 IKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVD 422
Query: 120 MYASCKCIYDARKVFDELSL----RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
+ + +A K+ ++L + +VW + + + ++ + + R LF+L N
Sbjct: 423 LLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKR-LFKL-EPTNA 480
Query: 176 ISWTTLIAGYAQMDQPNE 193
++ L YA+ + +E
Sbjct: 481 GNYVLLADIYAEAEMWDE 498
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/378 (43%), Positives = 242/378 (64%), Gaps = 9/378 (2%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
I +AR++FD++ +R NV WN M+A Y + ++ A +LF M EKN ISWTT+I GY
Sbjct: 136 IAEARRLFDQMPIR--NVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYV 193
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+M + +EA L +M N KPD+ LS+CA L A+++G+ +H + + G T +
Sbjct: 194 RMGKLDEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLF 252
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
++NALI MYAK G I A +F+++ + V++W ++IA AL+G GREAL +F +ME
Sbjct: 253 VSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEG 312
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V P+E+TF+ ILSAC HVGL++ G + F M Y IEP E Y CM+DLLGRAG L+EA
Sbjct: 313 VAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEA 372
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+L+R M ANA IWG+LL A I+G++EL + A + L++ EPH + NY +LSN+ A
Sbjct: 373 FQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEA 432
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GRW+E ++R++M++ G +K PG S+IE+ RVH F++ D +HP L IL +
Sbjct: 433 GRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTA-- 490
Query: 487 KFAEHLQNEFSGVLESDV 504
H++N LE DV
Sbjct: 491 ----HMRNTGDMPLELDV 504
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 49/279 (17%)
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
+ F+E++ R +V WN MV G+ +VGDLN++ FE + N +SW T++ G+A+ +
Sbjct: 79 QFFEEMAER--DVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKI 136
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA LF +M + NV W NA+
Sbjct: 137 AEARRLFDQMPIRNVV----------------------AW-----------------NAM 157
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
I Y ++ + +A+ +F M K+ I+WTT+I G G EA + ++M R KP++
Sbjct: 158 IAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPY-RNKPDQ 216
Query: 312 ITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
TF LS+C H+ +++G++ +MKS Y + + +I + + G + AE L
Sbjct: 217 STFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN--ALITMYAKCGSISSAELLF 274
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ + + W SL+AA + G+ G AL+ K+E
Sbjct: 275 KDID-HFDVVSWNSLIAAYALNGN---GREALKLFHKME 309
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 134/292 (45%), Gaps = 40/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +R + N +++ ++ +C D A S+F + + + T I + A
Sbjct: 146 MPIRNVVAWNAMIAAYVQNCHV----DEAISLFMEMPEKNSISWTTVINGYVRMGKLDEA 201
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L N++ +PD +F L + L+ +++G+++H + +G +D+ V ALI M
Sbjct: 202 RQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITM 260
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C I A +F ++ ++V WN+++A YA G N R
Sbjct: 261 YAKCGSISSAELLFKDIDH--FDVVSWNSLIAAYALNG---NGR---------------- 299
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
EA+ LF +M+VE V PDE+ + LSAC+ +G ++ G + ++ Y
Sbjct: 300 ------------EALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAY 347
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ + ++D+ ++G++ +A Q+ MK N + W ++ +HG
Sbjct: 348 NIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHG 399
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 256/479 (53%), Gaps = 33/479 (6%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N H+L+ + + G A +F P + I A + AV +
Sbjct: 152 NPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAF 211
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
A+ +RPD+++ VL A +++ + G + G+ V V A + +Y C
Sbjct: 212 ANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKC---- 267
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
G++ AR +F+ M +K+ ++W ++ GYA
Sbjct: 268 -----------------------------GEMAKAREVFDKMRDKDAVAWGAMVGGYASN 298
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
P EA+ LF MQ E V+PD A+ ALSAC +LGA++LG ++ L
Sbjct: 299 GHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 358
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
ALIDMYAK G +A VF+ M+ K +I W MI GL + G + A + +ME++ VK
Sbjct: 359 TALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK 418
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
N+ TFI +L +C H GL++ GRRYF+ M Y I P+IE YGC++DLL RAG LQEA +
Sbjct: 419 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQ 478
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP ANA I G+LL I+ + EL E L LI+LEP NSGNY +LSNIY+ GR
Sbjct: 479 LIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGR 538
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
W ++ K+R M++ GV+K+P CS++E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 539 WEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 597
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 36/321 (11%)
Query: 74 PDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P + +FP LK+ +L + G ++H +++ ++ HV+ +L+ +YA C ++ A++
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFDE+ + W ++ Y GDL
Sbjct: 175 VFDEMPHP--STVSWTALITAYMDAGDL-------------------------------R 201
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ + R ++PD + L+ACA++ + GE + EQ G+ V + A +
Sbjct: 202 EAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAV 261
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
D+Y K G++ KA +VF+ M++K + W M+ G A +G REALD+F M+ V+P+
Sbjct: 262 DLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCY 321
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
LSAC +G ++LGR+ ++ ++ + +ID+ + G EA + ++
Sbjct: 322 AVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTAEAWVVFQQ 380
Query: 373 MPFEANAAIWGSLLAASNIYG 393
M + + +W +++ + G
Sbjct: 381 M-RKKDIIVWNAMILGLGMTG 400
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 123/305 (40%), Gaps = 40/305 (13%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ Q+ + + +D G A +F D + + +P A+ L+
Sbjct: 249 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 308
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYAS 123
+QA +RPD Y+ L A +L ++LGR+ I LD+ V + ALI MYA
Sbjct: 309 LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAK 367
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C +A VF + +R ++ VWN M+ G G
Sbjct: 368 CGSTAEAWVVFQQ--MRKKDIIVWNAMILGLGMTG------------------------- 400
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLN 242
A TL +M+ VK ++ + L +C G ++ G + HN + Y ++
Sbjct: 401 ------HEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHIS 454
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH---GLGREALDM 298
+ ++D+ +++G + +A Q+ ++M + + ++ G +H L L
Sbjct: 455 PRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQ 514
Query: 299 FSRME 303
R+E
Sbjct: 515 LIRLE 519
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 258/435 (59%), Gaps = 5/435 (1%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F D + + + + D + A+ +++ ++ D V+
Sbjct: 217 GMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVV 276
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE-LSLRVW 142
A K I+ G H V GL S V+V LI MY+SC+ + AR++FD SL +
Sbjct: 277 AACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHF 336
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ WN+M++GY K G + +A+ALF++M +K+ +SW+ +IAG +Q +EA+ +F M+
Sbjct: 337 S---WNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMR 393
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+KPD++ +++ +SAC+ L A+E G+ +H YI +Y N + L +LIDMY K G +
Sbjct: 394 AHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCME 453
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK-PNEITFIAILSAC 321
AL+VF+ ++ K W +I GLA++GL +LDMFS ME PNEITF +LSAC
Sbjct: 454 AALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSAC 513
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLVE GR++F +M+++Y I P I YGCM+DLLGRAGY++EAE +++ MP +
Sbjct: 514 RHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPA 573
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
WG+LL A +GD E+GE + L+KL+P + G +LSNIYA G W +R M+
Sbjct: 574 WGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQ 633
Query: 442 MGVKKMPGCSYIEVS 456
V K+ GCS +E S
Sbjct: 634 QHVAKVAGCSMVEPS 648
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 196/429 (45%), Gaps = 71/429 (16%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
++ +F P+ + NT +KA + P LY + A+ PD Y+ P + A
Sbjct: 61 HSLQLFGLVRSPNAFTCNTLLKAALRQGFPHLCFPLYASMPAA---PDTYTHPLLAAACA 117
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ G ++H +V G ++++ AL+ MY++C C+ AR+VFD + VW+ W
Sbjct: 118 ARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFD--AGPVWDAVSW 175
Query: 148 NTMVAGYAKVGDLNNARALFELMTEK-------------------------------NVI 176
NT++A Y + GD+ A +F M E+ +
Sbjct: 176 NTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAF 235
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+WT +++ + + D EA+ +F M+ E DE M++ ++ACA+ G ++ GE H +
Sbjct: 236 TWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLV 295
Query: 237 EQYGLNTIVPLNNALIDMYA-------------------------------KSGKIGKAL 265
+ GL + V + N LI MY+ K+G++ A
Sbjct: 296 VRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAK 355
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
+F+ M +K ++W+ MIAG + EAL++F M +KP+++T ++++SAC ++
Sbjct: 356 ALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLS 415
Query: 326 LVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
+E G+ I K +Y I I +ID+ + G ++ A ++ M E W +
Sbjct: 416 ALEQGKLVHEYIRKYQYNI--TIVLGTSLIDMYMKCGCMEAALEVF-DMLEEKGTPCWNA 472
Query: 385 LLAASNIYG 393
++ + G
Sbjct: 473 VIVGLAMNG 481
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 256/479 (53%), Gaps = 33/479 (6%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N H+L+ + + G A +F P + I A + AV +
Sbjct: 105 NPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAF 164
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
A+ +RPD+++ VL A +++ + G + G+ V V A + +Y C
Sbjct: 165 ANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKC---- 220
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
G++ AR +F+ M +K+ ++W ++ GYA
Sbjct: 221 -----------------------------GEMAKAREVFDKMRDKDAVAWGAMVGGYASN 251
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
P EA+ LF MQ E V+PD A+ ALSAC +LGA++LG ++ L
Sbjct: 252 GHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 311
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
ALIDMYAK G +A VF+ M+ K +I W MI GL + G + A + +ME++ VK
Sbjct: 312 TALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK 371
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
N+ TFI +L +C H GL++ GRRYF+ M Y I P+IE YGC++DLL RAG LQEA +
Sbjct: 372 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQ 431
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP ANA I G+LL I+ + EL E L LI+LEP NSGNY +LSNIY+ GR
Sbjct: 432 LIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGR 491
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
W ++ K+R M++ GV+K+P CS++E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 492 WEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 550
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 36/321 (11%)
Query: 74 PDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P + +FP LK+ +L + G ++H +++ ++ HV+ +L+ +YA C ++ A++
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFDE+ + W ++ Y GDL
Sbjct: 128 VFDEMPHP--STVSWTALITAYMDAGDL-------------------------------R 154
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ + R ++PD + L+ACA++ + GE + EQ G+ V + A +
Sbjct: 155 EAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAV 214
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
D+Y K G++ KA +VF+ M++K + W M+ G A +G REALD+F M+ V+P+
Sbjct: 215 DLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCY 274
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
LSAC +G ++LGR+ ++ ++ + +ID+ + G EA + ++
Sbjct: 275 AVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTAEAWVVFQQ 333
Query: 373 MPFEANAAIWGSLLAASNIYG 393
M + + +W +++ + G
Sbjct: 334 M-RKKDIIVWNAMILGLGMTG 353
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 123/305 (40%), Gaps = 40/305 (13%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ Q+ + + +D G A +F D + + +P A+ L+
Sbjct: 202 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 261
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYAS 123
+QA +RPD Y+ L A +L ++LGR+ I LD+ V + ALI MYA
Sbjct: 262 LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAK 320
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C +A VF + +R ++ VWN M+ G G
Sbjct: 321 CGSTAEAWVVFQQ--MRKKDIIVWNAMILGLGMTG------------------------- 353
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLN 242
A TL +M+ VK ++ + L +C G ++ G + HN + Y ++
Sbjct: 354 ------HEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHIS 407
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALH---GLGREALDM 298
+ ++D+ +++G + +A Q+ ++M + + ++ G +H L L
Sbjct: 408 PRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQ 467
Query: 299 FSRME 303
R+E
Sbjct: 468 LIRLE 472
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 278/501 (55%), Gaps = 35/501 (6%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
+G D ++ + + + G +Y ++F S DV + T I L Q AV
Sbjct: 246 KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQA 305
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ +++ S + P+ Y+F V+ L+ IE G ++H + GL + + V +++ MYA
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + + +F E++ R ++ W+T++AGY + G ++ A FEL+ SW
Sbjct: 366 CGQLTSSSVIFHEMTRR--DIVSWSTIIAGYXQGGHVSEA---FELL------SW----- 409
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
M++E KP E A+ + LSAC + +E G+ +H Y+ GL
Sbjct: 410 -----------------MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEH 452
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ +ALI+MY K G I +A ++F+ +N +++WT MI G A HG RE +D+F ++
Sbjct: 453 TAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIP 512
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
R ++P+ +TFI +LSAC H GLV+LG YFN M +Y I P E YGCMIDLL RAG L
Sbjct: 513 RVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRL 572
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+AE ++ MPF + +W +LL A ++GDVE G + +++LEP+ +G + L+NIY
Sbjct: 573 SDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIY 632
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A G+W E+ IRK+M+ GV K PG S+I+V V FVAGD SHP + +Y +L +
Sbjct: 633 ASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Query: 484 GQMKFAEHLQNEFSGVLESDV 504
+ + A+ +Q +G L D+
Sbjct: 693 SRTELADCVQE--TGFLPYDL 711
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 155/339 (45%), Gaps = 34/339 (10%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F +V + I L + A++ ++++ S + D+Y+F LKA
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ GREIH Q + G D V L MY C
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKC--------------------------- 265
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G L LFE M+ ++V+SWTT+I QM Q A+ F RM+ +V P+E
Sbjct: 266 ------GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEY 319
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
A +S CA L +E GE +H I GL + + N+++ MYAK G++ + +F M
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ +++W+T+IAG G EA ++ S M KP E ++LSAC ++ ++E G+
Sbjct: 380 TRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 439
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+ + S G+E +I++ + G ++EA ++
Sbjct: 440 QLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 163/399 (40%), Gaps = 44/399 (11%)
Query: 6 LDQNNHLLSRF--------IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
L QN H +S+ + G A +F S+ D + T I ++
Sbjct: 37 LSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDS 96
Query: 58 LNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A++L+ ++ S LR D + KA S + G +H V TGL + V V +A
Sbjct: 97 SEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSA 156
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ MY I++ R+V F M +NV+
Sbjct: 157 LLDMYTKNGKIFEGRRV---------------------------------FHEMPMRNVV 183
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SWT +I G + EA+ F M V+ D AL ACA GA+ G IH
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ G + + N L MY K GK+ L +FE M + V++WTT+I L G A+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
F RM + V PNE TF A++S C ++ +E G + ++ G+ + ++ +
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL-HLGLAASLSVENSIMTM 362
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+ G L + + M + W +++A G V
Sbjct: 363 YAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYXQGGHV 400
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 268/468 (57%), Gaps = 6/468 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++ GL ++ SR + C+ G YA + H +P+ +++NT I+AL P
Sbjct: 56 LVKSGLAKDPIAASRAVAFCAGPGRDVSYAERLVRHHPRPNSFMWNTVIRALSDGARPEA 115
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV L+ + S P+ + P +L A +L G +H + GL D +V A I
Sbjct: 116 AVALFVDMLGSPTPPERRTLPSLLAAYARLGRAGDGAALHGMALKLGLAGDAYVRNATIA 175
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYASC +A +F + ++ N+ + A+ G ++ ARA+F+ M E+ V +W+
Sbjct: 176 MYASCARADEALALFGQCP--EFDAVACNSAIVALARAGRVDEARAVFDGMPERTVATWS 233
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+++ YA+ + EA+ LF MQ + V+P+ +++ L CA LGA++ G W+H YI+++
Sbjct: 234 AMVSAYARAARCGEALALFSAMQADGVEPNANVLVSVLGCCASLGALDQGAWVHAYIDRH 293
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS---VITWTTMIAGLALHGLGREAL 296
G+ + AL+DMY K G + A QVF+ +++ + +W +M+ GLA+HG REA+
Sbjct: 294 GVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGSAKLSSWNSMMQGLAVHGQWREAV 353
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+FS + + P+ +TFIA+L+A H G+ + + F M + + +EP IE YGC++D
Sbjct: 354 ALFSELRSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASMATEHSVEPGIEHYGCLVDA 413
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
L RAG L+EAE +R MP +AA+WG+LL+ ++GD ELG A + ++ +P +SG Y
Sbjct: 414 LARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLHGDAELGARAAREAVRCDPRDSGAY 473
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA 464
+ +++ A G +R MR+ GV K+PGCS IEV+ VHEFV+
Sbjct: 474 VLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIEVNGVVHEFVS 521
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 287/502 (57%), Gaps = 10/502 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR N ++S + + G S+ + + +P++ + + + + + +
Sbjct: 1034 MAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVET 1093
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ + + VL V L+ + G+ IH V G ++ + V +LI +
Sbjct: 1094 MELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICL 1153
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF-EL-------MTE 172
Y + AR +F L ++ N+ WN +++ YA +G + A A+F +L M
Sbjct: 1154 YGKHGNVNAARILF--LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 1211
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
NV+SW+ +I G+A Q EA+ LFRRMQ+ VK + + + + LS CA+L A+ LG I
Sbjct: 1212 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 1271
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H ++ + ++ + + N LI+MY KSG + VFE ++NK +I+W TM+AG +HGLG
Sbjct: 1272 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 1331
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
A+ F +M + +P+ +TF+A+LSAC H GLV GR F+ M + +EP++E Y C
Sbjct: 1332 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 1391
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLLGRAG LQEA K+++ MP E NA +WG+LL + ++ + E+ E + L
Sbjct: 1392 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEI 1451
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
+G+Y +LSNIYA GRW +S K+R + G+KK PG S+I+V K+V+ F AG+T H +
Sbjct: 1452 AGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAEL 1511
Query: 473 DRLYQILCKINGQMKFAEHLQN 494
+ +Y+IL + QM+ ++ +
Sbjct: 1512 EEVYRILKDLGLQMEVEGYIPD 1533
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 228/474 (48%), Gaps = 64/474 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP-----DVYLYNTTIKALCQTD 55
+IV G ++ L +R + + G A +F + P ++ L+N+ ++A
Sbjct: 895 IIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF--EVSPIECFSNLLLWNSILRANVAHG 952
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A+ +Y +++ + D ++FP V++A + + +L R +H V G ++HV
Sbjct: 953 YCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGN 1012
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT---- 171
L+ MY + DARKVF+ +++R + WNTMV+GYA D + A +F +M
Sbjct: 1013 ELMGMYGKIGRMDDARKVFERMAVR--SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGL 1070
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
E N+++WT+L++ +A+ Q E + LF RM++ + A+ LS L A + G+
Sbjct: 1071 EPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 1130
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK----------------- 274
IH Y+ + G + + N+LI +Y K G + A +F +K K
Sbjct: 1131 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGW 1190
Query: 275 ----------------------SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
+V++W+ +I G A G G EAL++F RM+ A+VK N +
Sbjct: 1191 CDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSV 1250
Query: 313 TFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
T ++LS C + + LGR + ++++S ++ I +I++ ++G +E +
Sbjct: 1251 TIASVLSVCAELAALHLGREIHGHVVRSL--MDGNILVGNGLINMYTKSGSFKEGNLVFE 1308
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQ---HLIK--LEPHNSGNYAILS 420
++ + W +++A I+G LGE A++ +IK EP A+LS
Sbjct: 1309 KIE-NKDLISWNTMVAGYGIHG---LGENAIRTFDQMIKDGFEPDGVTFVAVLS 1358
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 40/273 (14%)
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+P+N F + + S L ++IH Q + TG + A ++ +YA + DA++
Sbjct: 866 QPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQR 925
Query: 133 VFDELSLRVW-NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF+ + + N+ +WN+++ RA + GY +
Sbjct: 926 VFEVSPIECFSNLLLWNSIL------------RA--------------NVAHGYCE---- 955
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA+ ++ RM+ V D + ACA +G+ +L +H ++ + G + + N L
Sbjct: 956 -EALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNEL 1014
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+ MY K G++ A +VFE M +S ++W TM++G AL+ A +MF M A ++PN
Sbjct: 1015 MGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNL 1074
Query: 312 ITFIAILS--ACC--HVGLVELGRRYFNIMKSR 340
+T+ ++LS A C HV +EL F M+ R
Sbjct: 1075 VTWTSLLSSHARCGQHVETMEL----FGRMRMR 1103
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 222 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVIT 278
Q L + IH+ I G + L ++ +YA G + A +VFE + +++
Sbjct: 881 QCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLL 940
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +++ HG EAL+++ RM + V + TF ++ AC +G +L R +
Sbjct: 941 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHV- 999
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G + + ++ + G+ G + +A K+ RM + + W ++++
Sbjct: 1000 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS-WNTMVSG 1048
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 257/459 (55%), Gaps = 36/459 (7%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L R C S+ + A IF + D+ + I A Q+ N A L +++
Sbjct: 170 LLRMYGKCGSI---NEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGF 226
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+P+ ++ +L A ++ + +H + GL+ DV V AL+QMYA
Sbjct: 227 KPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYA---------- 276
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
K G +++AR +F+ M ++V+SW +I +A+ + +
Sbjct: 277 -----------------------KSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA LF +MQ E KPD I L+ L+ACA GA+E + IH + GL V + AL+
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALV 373
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
MY+KSG I A VF+ MK ++V++W MI+GLA HGLG++AL++F RM VKP+ +
Sbjct: 374 HMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRV 433
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+A+LSAC H GLV+ GR + M YGIEP + CM+DLLGRAG L EA+ +
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN 493
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
M + + A WG+LL + YG+VELGE + +KL+P N+ Y +LSNIYA G+W+
Sbjct: 494 MAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMV 553
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
+R +MR+ G++K PG S+IEV ++H+F+ D+SHP+
Sbjct: 554 SWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPE 592
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 166/343 (48%), Gaps = 38/343 (11%)
Query: 53 QTDNPLNA--VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD 110
QT N L+ V+L N++Q L D++ + VLK +K + +++H + + ++ +
Sbjct: 4 QTANTLSEAIVVLMNRLQ-RGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQN 62
Query: 111 VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
HV+ L+ +Y C G L AR +F+ +
Sbjct: 63 AHVMNNLLHVYIEC---------------------------------GRLQEARCVFDAL 89
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
+K+ SW +IAGY + +A+ LFR M E V+P+ + L ACA L A++ G+
Sbjct: 90 VKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGK 149
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+H I GL + V + AL+ MY K G I +A ++F+N+ N +I+WT MI A G
Sbjct: 150 EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG 209
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
G+EA + +ME+ KPN IT+++IL+AC G ++ +R G+E +
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHR-HALDAGLELDVRVG 268
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
++ + ++G + +A + RM + W ++ A +G
Sbjct: 269 TALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFAEHG 310
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 267/492 (54%), Gaps = 35/492 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + + + I SS G D+A +F DV + I + + A++ +
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYAS 123
+++ + + + + VLKA K+ + GR +H + TG + DV + ++L+ MY
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C DA+KVFDE+ R NV W ++AGY + +R
Sbjct: 253 CSCYDDAQKVFDEMPSR--NVVTWTALIAGYVQ------SRCF----------------- 287
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++ + +F M +V P+E + + LSACA +GA+ G +H Y+ + +
Sbjct: 288 --------DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
LID+Y K G + +A+ VFE + K+V TWT MI G A HG R+A D+F M
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ V PNE+TF+A+LSAC H GLVE GRR F MK R+ +EPK + Y CM+DL GR G L
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA+ L+ RMP E +WG+L + ++ D ELG+ A +IKL+P +SG Y +L+N+Y
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLY 519
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP-DFDRLYQILCKI 482
+ W+E ++RK M+D V K PG S+IEV ++ EF+A D P + D LY+ L +
Sbjct: 520 SESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Query: 483 NGQMKFAEHLQN 494
QM+ + L++
Sbjct: 580 GVQMRLPDELED 591
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 170/386 (44%), Gaps = 40/386 (10%)
Query: 12 LLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNPLNAVILYNKIQ 68
LSR + C + YA + + L+++ I T N + + Y ++
Sbjct: 37 FLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMR 96
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
+ + P ++FP +LKAV KL + H V GLDSD V +LI Y+S
Sbjct: 97 RNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFD 155
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
A ++FD + +V W M+ G+ + G
Sbjct: 156 FASRLFDGAEDK--DVVTWTAMIDGFVRNG------------------------------ 183
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPL 247
+EA+ F M+ V +E+ +++ L A ++ V G +H Y+E + V +
Sbjct: 184 -SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
++L+DMY K A +VF+ M +++V+TWT +IAG + + +F M ++ V
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
PNE T ++LSAC HVG + GRR M + IE +IDL + G L+EA
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYG 393
+ R+ E N W +++ +G
Sbjct: 362 LVFERL-HEKNVYTWTAMINGFAAHG 386
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 282/564 (50%), Gaps = 82/564 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLN 59
M++ G + ++ I+ S ++A SIF+ + +V+ +N I P
Sbjct: 63 MLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEE 122
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
Y K++ + PD ++FP +KA + + I ++IH GL+ DV + +AL+
Sbjct: 123 GFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVN 179
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV---------------------- 157
Y + A+ F+EL +R +V +WN MV GYA++
Sbjct: 180 CYLKFGLMEHAQVAFEELPIR--DVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSR 237
Query: 158 -------------GDLNNAR-----------------------------------ALFEL 169
GDLNN R +FE+
Sbjct: 238 FTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEM 297
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M EK++ SW ++++ + Q + + L RM ++PD + + L AC+ L A+ G
Sbjct: 298 MREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG 357
Query: 230 EWIHNYIEQYGLNTI------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
IH Y+ GL V L NA+IDMYAK G + A VFE M NK V +W MI
Sbjct: 358 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMI 417
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
G +HG G EAL+MFSRM ++KP+E+TF+ +LSAC H G V GR + MKS+Y +
Sbjct: 418 MGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDV 477
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
P IE Y C+ID+LGRAG L EA +L MP EAN +W +LLAA ++ L E A Q
Sbjct: 478 APTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQ 537
Query: 404 HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFV 463
+ +LEP + G+Y ++SN+Y +GR+ E ++R MR V+K PGCS+IE+ VH FV
Sbjct: 538 RVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFV 597
Query: 464 AGDTSHPDFDRLYQILCKINGQMK 487
+ D +HP+ +Y L + +++
Sbjct: 598 SADRAHPEAHSIYAGLNSLTARLR 621
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 268/457 (58%), Gaps = 41/457 (8%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
D + NT ++ + P A+ L+ + A PD +++P +++A +L + G +H
Sbjct: 771 DPFPLNTVLRIAAGSPRPRVALELHRRRLA---LPDTHTYPPLIQACARLLALREGECLH 827
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ G + V V +L+ +Y +C A KVFDE+ +R
Sbjct: 828 AEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVR------------------- 868
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+N++SW +++ +A +PNE +T+F M + PD +++ L+A
Sbjct: 869 ------------GRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTA 916
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVIT 278
CA+ GA+ LG +H Y+E+ GL ++NALID+YAK G + A ++FE M ++V++
Sbjct: 917 CAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVS 976
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
WT++I GLA +G G+EAL++FS MER ++ P EIT + +L AC H GLV+ G RYF+ MK
Sbjct: 977 WTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMK 1036
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
YGI P+IE GCM+DLLGRAG ++EA + MP E NA +W +LL + ++ +ELG
Sbjct: 1037 EDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELG 1096
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
+ A + L++L+P +SG+Y +LSN+YA +G W + +RK M V+K PG S +E+
Sbjct: 1097 KVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNS 1156
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
V+EFV GD SHP+ +++Y++L +I AE L+ E
Sbjct: 1157 VYEFVMGDRSHPESEQIYEMLAEI------AERLRRE 1187
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 272/484 (56%), Gaps = 34/484 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + + + + G A IF + +V + I Q A+ L
Sbjct: 178 GLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELL 237
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q + + P+ +F +L+ + +E G+++H + +G ++ VV +LI MY C
Sbjct: 238 ETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMY--C 295
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
KC G L AR LF + ++V++WT ++ G
Sbjct: 296 KC-------------------------------GGLEEARKLFSDLPHRDVVTWTAMVTG 324
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ+ +EAI LFRRMQ + +KPD++ + L++C+ ++ G+ IH + G N
Sbjct: 325 YAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLD 384
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL-ALHGLGREALDMFSRME 303
V L +AL+ MYAK G + A VF M ++V+ WT +I G A HG REAL+ F +M+
Sbjct: 385 VYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMK 444
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ +KP+++TF ++LSAC HVGLVE GR++F M YGI+P +E Y C +DLLGRAG+L
Sbjct: 445 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 504
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EAE ++ MPF ++WG+LL+A ++ DVE GE A ++++KL+P + G Y LS+IY
Sbjct: 505 EEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIY 564
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A GR+ ++ K+R+VM V K PG S+IEV +VH F D SHP+ +++Y L K+
Sbjct: 565 AAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLT 624
Query: 484 GQMK 487
Q+K
Sbjct: 625 EQIK 628
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 185/385 (48%), Gaps = 37/385 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N +L + + + G A +F ++ + I+A + L A Y
Sbjct: 77 GIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCY 136
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + +PD +F +L A ++LG+++H + V GL+ + V +L+ MYA C
Sbjct: 137 ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC 196
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I AR +FD L + NV W ++AGYA+ G
Sbjct: 197 GDISKARVIFDRLPEK--NVVTWTLLIAGYAQQG-------------------------- 228
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Q + A+ L MQ V P++I + L C A+E G+ +H YI Q G
Sbjct: 229 -----QVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + N+LI MY K G + +A ++F ++ ++ V+TWT M+ G A G EA+++F RM++
Sbjct: 284 LWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP+++TF ++L++C ++ G+R + ++ + Y ++ ++ ++ + + G +
Sbjct: 344 QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSM 401
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAA 388
+A + +M E N W +++
Sbjct: 402 DDASLVFNQMS-ERNVVAWTAIITG 425
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 166/342 (48%), Gaps = 37/342 (10%)
Query: 48 IKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL 107
+ LC+T A+ + N + R + F +L+ +L ++E GRE+H + +G+
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
+ ++ L+ MYA C + DAR+VFD + R
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDR--------------------------- 111
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
N++SWT +I + ++ EA + M++ KPD++ ++ L+A ++
Sbjct: 112 ------NIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQ 165
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
LG+ +H I + GL + +L+ MYAK G I KA +F+ + K+V+TWT +IAG A
Sbjct: 166 LGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYA 225
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPK 346
G AL++ M++A V PN+ITF +IL C +E G++ I++S YG E
Sbjct: 226 QQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELW 285
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ +I + + G L+EA KL +P + W +++
Sbjct: 286 V--VNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMVTG 324
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 20/247 (8%)
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
AG+ KV L N+R + L + + EA+ + M ++ +
Sbjct: 5 AGFRKVETLANSRDVSVL----------------CKTGRLKEALGIMNTMILQGTRVYSD 48
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
L CA+L ++E G +H I + G+ L N L+ MYAK G + A +VF+++
Sbjct: 49 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSI 108
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+++++++WT MI EA + M+ A KP+++TF+++L+A + L++LG+
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 332 R-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ + I+++ +EP++ ++ + + G + +A + R+P E N W L+A
Sbjct: 169 KVHMEIVEAGLELEPRVGT--SLVGMYAKCGDISKARVIFDRLP-EKNVVTWTLLIAGYA 225
Query: 391 IYGDVEL 397
G V++
Sbjct: 226 QQGQVDV 232
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 284/495 (57%), Gaps = 10/495 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR N ++S + + G S+ + + +P++ + + + + + +
Sbjct: 196 MAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVET 255
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ + + VL V L+ + G+ IH V G ++ + V +LI +
Sbjct: 256 MELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICL 315
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF-EL-------MTE 172
Y + AR +F L ++ N+ WN +++ YA +G + A A+F +L M
Sbjct: 316 YGKHGNVNAARILF--LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
NV+SW+ +I G+A Q EA+ LFRRMQ+ VK + + + + LS CA+L A+ LG I
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H ++ + ++ + + N LI+MY KSG + VFE ++NK +I+W TM+AG +HGLG
Sbjct: 434 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 493
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
A+ F +M + +P+ +TF+A+LSAC H GLV GR F+ M + +EP++E Y C
Sbjct: 494 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLLGRAG LQEA K+++ MP E NA +WG+LL + ++ + E+ E + L
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEI 613
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
+G+Y +LSNIYA GRW +S K+R + G+KK PG S+I+V K+V+ F AG+T H +
Sbjct: 614 AGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAEL 673
Query: 473 DRLYQILCKINGQMK 487
+ +Y+IL + QM+
Sbjct: 674 EEVYRILKDLGLQME 688
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 228/474 (48%), Gaps = 64/474 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP-----DVYLYNTTIKALCQTD 55
+IV G ++ L +R + + G A +F + P ++ L+N+ ++A
Sbjct: 57 IIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF--EVSPIECFSNLLLWNSILRANVAHG 114
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A+ +Y +++ + D ++FP V++A + + +L R +H V G ++HV
Sbjct: 115 YCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGN 174
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----T 171
L+ MY + DARKVF+ +++R + WNTMV+GYA D + A +F +M
Sbjct: 175 ELMGMYGKIGRMDDARKVFERMAVR--SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGL 232
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
E N+++WT+L++ +A+ Q E + LF RM++ + A+ LS L A + G+
Sbjct: 233 EPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 292
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK----------------- 274
IH Y+ + G + + N+LI +Y K G + A +F +K K
Sbjct: 293 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGW 352
Query: 275 ----------------------SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
+V++W+ +I G A G G EAL++F RM+ A+VK N +
Sbjct: 353 CDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSV 412
Query: 313 TFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
T ++LS C + + LGR + ++++S ++ I +I++ ++G +E +
Sbjct: 413 TIASVLSVCAELAALHLGREIHGHVVRSL--MDGNILVGNGLINMYTKSGSFKEGNLVFE 470
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQ---HLIK--LEPHNSGNYAILS 420
++ + W +++A I+G LGE A++ +IK EP A+LS
Sbjct: 471 KIE-NKDLISWNTMVAGYGIHG---LGENAIRTFDQMIKDGFEPDGVTFVAVLS 520
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 32/254 (12%)
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+P+N F + + S L ++IH Q + TG + A ++ +YA + DA++
Sbjct: 28 QPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQR 87
Query: 133 VFDELSLRVW-NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF+ + + N+ +WN+++ RA + GY +
Sbjct: 88 VFEVSPIECFSNLLLWNSIL------------RA--------------NVAHGYCE---- 117
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
EA+ ++ RM+ V D + ACA +G+ +L +H ++ + G + + N L
Sbjct: 118 -EALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNEL 176
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+ MY K G++ A +VFE M +S ++W TM++G AL+ A +MF M A ++PN
Sbjct: 177 MGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNL 236
Query: 312 ITFIAILSACCHVG 325
+T+ ++LS+ G
Sbjct: 237 VTWTSLLSSHARCG 250
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 222 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVIT 278
Q L + IH+ I G + L ++ +YA G + A +VFE + +++
Sbjct: 43 QCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLL 102
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W +++ HG EAL+++ RM + V + TF ++ AC +G +L R +
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHV- 161
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G + + ++ + G+ G + +A K+ RM + + W ++++
Sbjct: 162 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS-WNTMVSG 210
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 269/464 (57%), Gaps = 10/464 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + DV +NT + + + A L++ + +R D +++ ++ +
Sbjct: 281 AQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFD---VAPIR-DVFTWTAIVSGYAQ 336
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+E + + D + A++ Y + + +A+++FD + R NVA WN
Sbjct: 337 NGMLEEAKRV----FDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCR--NVASWN 390
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ GYA+ G L+ ARA+F +M +K+ +SW ++A Y+Q+ E + LF+ M
Sbjct: 391 TMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWV 450
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ A LS CA + A+E G +H+ + + G + NAL+ MY K G + +A F
Sbjct: 451 NRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAF 510
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E M+ + V++W TMIAG A HG G+EAL++F M + KP++IT + +L+AC H GLVE
Sbjct: 511 EEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVE 570
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G YF M +G+ K E Y CMIDLLGRAG L EA L++ MPFE ++ +WG+LL A
Sbjct: 571 KGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGA 630
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S I+ + ELG A + + +LEP N+G Y +LSNIYA G+W + K+R +M + GVKK+P
Sbjct: 631 SRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVP 690
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
G S+IEV +VH F GD+ HP+ + +Y L ++ +MK A ++
Sbjct: 691 GFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYV 734
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 202/460 (43%), Gaps = 67/460 (14%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDN-----------PLNAVILYNKIQAS------- 70
A S F +PD + YNT + AL + + P+ + YN + +S
Sbjct: 157 ALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLV 216
Query: 71 ---------ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
A D S+ +L A V+ I+ RE+ + + D AL+ Y
Sbjct: 217 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEAREL----FDSRTEWDAISWNALMAGY 272
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
I +A+K+F+++ R +V WNTMV+GYA+ GD+ AR LF++ ++V +WT +
Sbjct: 273 VQRSQIEEAQKMFNKMPQR--DVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAI 330
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
++GYAQ EA +F M +N ++ A ++A Q +E + + + + +
Sbjct: 331 VSGYAQNGMLEEAKRVFDAMPDKNA----VSWNAMMAAYVQRRMMEEAKELFDAMPCRNV 386
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ N ++ YA++G + +A +F M K ++W M+A + G E L +F
Sbjct: 387 ASW----NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKE 442
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID----- 355
M R N F +LS C + +E G + + ++K+ YG+ GC +
Sbjct: 443 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGV-------GCFVGNALLA 495
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+ + G ++EA M E + W +++A +G G+ AL+ + ++
Sbjct: 496 MYFKCGSMEEAHSAFEEME-ERDVVSWNTMIAGYARHG---FGKEALEVFDTMRKTSTKP 551
Query: 416 YAILSNIYAILGRWNESGKIRK-------VMRDMGVKKMP 448
I + +L + SG + K + RD GV P
Sbjct: 552 DDI--TLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKP 589
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 38/285 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +IF + D + + A Q + L+ ++ + +F VL
Sbjct: 400 GMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVL 459
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
++ +E G ++H + + G V AL+ MY C + +A F+E+ R +
Sbjct: 460 STCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEER--D 517
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V WNTM+AGYA+ G+ + EA+ +F M+
Sbjct: 518 VVSWNTMIAGYAR--------------------------HGFGK-----EALEVFDTMRK 546
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ KPD+I ++ L+AC+ G VE G + ++ +G+ T +ID+ ++G++
Sbjct: 547 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLD 606
Query: 263 KALQVFENMKNKSVIT-WTTMIAGLALH---GLGREALDMFSRME 303
+A+ + ++M + T W ++ +H LGR A + +E
Sbjct: 607 EAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELE 651
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 23/313 (7%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ DA ++F + R + + +NTM+AGYA G L A + F + + S+ TL+
Sbjct: 123 VPDAERLFAAMPRR--STSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALG 180
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ LF M V+ D ++ +S+ A G V L +Y + V
Sbjct: 181 VSSSLADVRALFDEMPVK----DSVSYNVMISSHANHGLVSLAR---HYFDLAPEKDAVS 233
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
N ++ Y ++G+I +A ++F++ I+W ++AG EA MF++M +
Sbjct: 234 W-NGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRD 292
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V +++ ++S G + RR F++ R + + ++ + G L+EA
Sbjct: 293 V----VSWNTMVSGYARRGDMAEARRLFDVAPIR-----DVFTWTAIVSGYAQNGMLEEA 343
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+++ MP + NA W +++AA Y + E A + + N ++ + YA
Sbjct: 344 KRVFDAMP-DKNAVSWNAMMAA---YVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQA 399
Query: 427 GRWNESGKIRKVM 439
G +E+ I +M
Sbjct: 400 GMLDEARAIFGMM 412
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER---- 304
N I + ++G++ A ++F M +S T+ TM+AG A +G +AL F + R
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSF 170
Query: 305 ---------------ARVKP--------NEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
A V+ + +++ ++S+ + GLV L R YF++ +
Sbjct: 171 SYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKD 230
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + M+ R G +QEA +L E +A W +L+A
Sbjct: 231 AV-----SWNGMLAAYVRNGRIQEARELFDSRT-EWDAISWNALMAG 271
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 283/533 (53%), Gaps = 72/533 (13%)
Query: 26 SDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
+ Y+Y +F+H P+++LYN+ I + L+ I+ L ++FP VLKA
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ S+ +LG ++H V G + DV + +L+ +Y+ + DA K+FDE+ R +V
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR--SVV 178
Query: 146 VWNTMVAGYA-----------------------------------KVGDLNNARALFELM 170
W + +GY VGDL++ + + M
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 171 TE----KNVISWTTLIAGYAQMDQPNEA-------------------------------I 195
E KN TTL+ YA+ + +A I
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF +M EN+KPD+ +++ LS+CA LGA++LGEW + I+++ T + + NALIDMY
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + + +VF+ MK K ++ I+GLA +G + + +F + E+ + P+ TF+
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L C H GL++ G R+FN + Y ++ +E YGCM+DL GRAG L +A +L+ MP
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
NA +WG+LL+ + D +L E L+ LI LEP N+GNY LSNIY++ GRW+E+ ++
Sbjct: 479 RPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEV 538
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
R +M G+KK+PG S+IE+ +VHEF+A D SHP D++Y L + +M+
Sbjct: 539 RDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 259/453 (57%), Gaps = 6/453 (1%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P+V +N + L ++ L+AV ++ + PD L AV + + +G++
Sbjct: 115 EPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQ 174
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H V G D VV ALI MY C + +VF E S +VA N +VAG ++
Sbjct: 175 VHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSH--MDVASCNALVAGLSRN 232
Query: 158 GDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
++ A LF E NV+SWT+++A Q + EA+ LFR MQ V+P+ + +
Sbjct: 233 AQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTI 292
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
L A A + A+ G H + + G V + +AL+DMYAK GK A +F+ M +
Sbjct: 293 PCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPS 352
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
++V++W MI G A+HG A+ +F M++ + KP+ +TF +L AC GL E GRRY
Sbjct: 353 RNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRY 412
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
FN M+ +GI P++E Y CM+ LLGR+G L EA L+ MPFE ++ IWGSLL + +YG
Sbjct: 413 FNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYG 472
Query: 394 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
+V L E A + L +LEP N+GNY +LSNIYA W+ ++R M++MG+KK GCS+I
Sbjct: 473 NVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWI 532
Query: 454 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
E+ +VH +AGD SHP + + L ++ +M
Sbjct: 533 EIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEM 565
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 162/371 (43%), Gaps = 46/371 (12%)
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
LY+ ++ + PD + P LK+ L R +H V +GL D V ++L+ Y
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSC---PAQPLARALHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVISW 178
AR VFD + + NV W+ ++AGY+ GD A L E M E NVI+W
Sbjct: 64 RLGATGAARSVFDRMPEK--NVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITW 121
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
L++G + + +A+T RM E PD + ALSA + V +G+ +H Y+ +
Sbjct: 122 NGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVK 181
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK------------------------ 274
G + ALIDMY K G+ + ++VF +
Sbjct: 182 AGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLL 241
Query: 275 -----------SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
+V++WT+++A +G EA+D+F M+ V+PN +T +L A +
Sbjct: 242 FREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFAN 301
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
V + GR + R G + ++D+ + G + A + MP N W
Sbjct: 302 VAALMHGRSA-HCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMP-SRNVVSWN 359
Query: 384 SLLAASNIYGD 394
+++ ++GD
Sbjct: 360 AMIGGYAMHGD 370
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+L+ ++ + PD + +AL +C A L +H GL + ++L+ Y
Sbjct: 6 SLYHFLRHVSFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSY 62
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
+ G G A VF+ M K+V+ W+ +IAG + G A + +M A V+PN IT+
Sbjct: 63 IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWN 122
Query: 316 AILSACCHVGLVELGR 331
++S GL GR
Sbjct: 123 GLVS-----GLNRSGR 133
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 284/517 (54%), Gaps = 39/517 (7%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N L + + + ++ G A ++F + +V YN I++ +A++++ +
Sbjct: 65 ENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDM 124
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
+ PD+Y++P VLKA + +G ++H GLD ++ V LI +Y C C+
Sbjct: 125 VSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCL 184
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA------------------------ 163
+AR V DE+ + +V WN+MVAGYA+ ++A
Sbjct: 185 PEARCVLDEMQSK--DVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLP 242
Query: 164 -------------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+F + +K+++SW +I+ Y + P +++ L+ +M V+PD
Sbjct: 243 AVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDA 302
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
I + L AC L A+ LG IH Y+E+ L + L N+LIDMYA+ G + A +VF+
Sbjct: 303 ITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDR 362
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
MK + V +WT++I+ + G G A+ +F+ M+ + P+ I F+AILSAC H GL+ G
Sbjct: 363 MKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEG 422
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ YF M Y I P IE + C++DLLGR+G + EA ++++MP + N +WG+LL++
Sbjct: 423 KFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCR 482
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
+Y ++++G A L++L P SG Y +LSNIYA GRW E IR +M+ ++KMPG
Sbjct: 483 VYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGI 542
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
S +E++ +VH F+AGDT HP +Y+ L + G+MK
Sbjct: 543 SNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMK 579
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+H+ + + L L+ YA G+ G A VF+ + ++VI + MI + L
Sbjct: 54 VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHL 113
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
+AL +F M P+ T+ +L AC + +G + + + G++ +
Sbjct: 114 YDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAV-FKVGLDLNLFVGN 172
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLE 409
+I L G+ G L EA +L M + W S++A A N+ D L C ++ +
Sbjct: 173 GLIALYGKCGCLPEARCVLDEMQ-SKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQK 231
Query: 410 P 410
P
Sbjct: 232 P 232
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 292/502 (58%), Gaps = 16/502 (3%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L +F SC + + H K D + T + + + A++++ +++ +
Sbjct: 56 LLQFYASCGCAWQARKVFDEIPHSHK-DTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGV 114
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+PD + + +L + +G + H V GL A++ MYA + +AR+
Sbjct: 115 KPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARR 174
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF E+ + +V W ++ G + + N R +F+ M E+N ++WT +IAGY
Sbjct: 175 VFYEM--KGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQ 232
Query: 193 EAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNY---IEQYGLNTIVPLN 248
E+ L R M + ++ + + + + L+AC+Q G + +G W+H Y ++ LN +V
Sbjct: 233 ESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMV--G 290
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
A++DMYAK G+I A + F+ M ++V++W M++GLA+HGLGR ALD+F +M + K
Sbjct: 291 TAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFK-EAK 349
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P+++TF ++LSAC H GLV+ G YF ++S YGI PK+E Y CM+DLLGRAG L+EAE
Sbjct: 350 PDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEI 409
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+R MP N + GSLL + +I+G ++LGE LQ L++L+P N+ + +LSN+YA+ G+
Sbjct: 410 LVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGK 469
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
N + +R+V++ G+KK+PG S I V +VH+F AGD SHP +Y +L ++ +++
Sbjct: 470 QNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRL 529
Query: 489 AEHLQN----EFSGV--LESDV 504
A + N F+G LE D+
Sbjct: 530 AGYAPNTALQTFAGCDSLEDDL 551
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 168/367 (45%), Gaps = 69/367 (18%)
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDS--DVHVVAALIQMYASCKCI 127
+AL + + F+L++ + S++++G +H + TG+ + + AL+Q YASC C
Sbjct: 7 TALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCA 66
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQ 187
+ ARKVFDE+ + K+ + WTTL+ + +
Sbjct: 67 WQARKVFDEIP-------------------------------HSHKDTVDWTTLMGCFVR 95
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
+ +EA+ +F M+ VKPDE+ ++ CA+LG V +G H + + GL +
Sbjct: 96 HNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKA 155
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTT-------------------------- 281
NA++DMYAKSG +G+A +VF MK +SV++WT
Sbjct: 156 CNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNE 215
Query: 282 -----MIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
MIAG GL +E+ + M ++ N +T +IL+AC G + +GR
Sbjct: 216 VAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHA 275
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
E I M+D+ + G + A K ++MP + N W ++L+ ++G
Sbjct: 276 YALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMP-QRNVVSWNAMLSGLAMHG-- 332
Query: 396 ELGECAL 402
LG AL
Sbjct: 333 -LGRAAL 338
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/437 (37%), Positives = 261/437 (59%), Gaps = 5/437 (1%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
SC LG A +F + D+ +N+ + Q + ++ ++ + ++ D +
Sbjct: 124 SCGHLGL---AQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVT 180
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
V+ A L + + ++ DV++ LI MY ++ AR VFD++
Sbjct: 181 MVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQ 240
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
R N+ WN M+ GY K G+L AR LF+ M++++VISWT +I Y+Q Q EA+ LF
Sbjct: 241 WR--NLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLF 298
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
+ M VKPDEI + + LSACA G++++GE H+YI++Y + + + NALIDMY K
Sbjct: 299 KEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKC 358
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G + KAL+VF+ M+ K ++WT++I+GLA++G ALD FSRM R V+P+ F+ IL
Sbjct: 359 GVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGIL 418
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
AC H GLV+ G YF M+ YG++P+++ YGC++DLL R+G LQ A + ++ MP +
Sbjct: 419 LACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPD 478
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
IW LL+AS ++G++ L E A + L++L+P NSGNY + SN YA RW ++ K+R++
Sbjct: 479 VVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMREL 538
Query: 439 MRDMGVKKMPGCSYIEV 455
M V+K G S IE+
Sbjct: 539 MEKSNVQKPSGSSCIEM 555
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 192/411 (46%), Gaps = 69/411 (16%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+++F +P + +N I+ +D P A+ +YN + L +N ++ F+ KA +
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ + G IH + + G +S ++V ALI MY SC + A+KVFDE+ R ++ WN
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPER--DLVSWN 147
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
++V G Y Q + E + +F M+V VK
Sbjct: 148 SLVCG-------------------------------YGQCKRFREVLGVFEAMRVAGVKG 176
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM-------------- 254
D + M+ + AC LG + + + +YIE+ + V L N LIDM
Sbjct: 177 DAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVF 236
Query: 255 -----------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
Y K+G + A ++F+ M + VI+WT MI + G EAL
Sbjct: 237 DQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALR 296
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M ++VKP+EIT ++LSAC H G +++G + ++ +Y ++ I +ID+
Sbjct: 297 LFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQ-KYDVKADIYVGNALIDMY 355
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
+ G +++A ++ + M + ++ W S+++ + G + AL + ++
Sbjct: 356 CKCGVVEKALEVFKEMR-KKDSVSWTSIISGLAVNG---FADSALDYFSRM 402
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 147/312 (47%), Gaps = 16/312 (5%)
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
A LF+ + + W +I G++ DQPNEAI ++ M + + + + L ACA+
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
+ V G IH + + G + + ++NALI+MY G +G A +VF+ M + +++W ++
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSL 149
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
+ G RE L +F M A VK + +T + ++ AC +G + + ++
Sbjct: 150 VCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEEN-N 208
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
+E + +ID+ GR G + A + +M + N W +++ YG A
Sbjct: 209 VEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWR-NLVSWNAMIMG---YGKAGNLVAAR 264
Query: 403 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY-- 452
+ + + ++ + Y+ G++ E+ ++ K M + VK + C++
Sbjct: 265 ELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTG 324
Query: 453 -IEVSKRVHEFV 463
++V + H+++
Sbjct: 325 SLDVGEAAHDYI 336
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 284/476 (59%), Gaps = 11/476 (2%)
Query: 36 KSKPD---VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV---KL 89
K KP+ + ++I C+ +N L A + ++ + + P++ + +L A
Sbjct: 44 KHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSK 103
Query: 90 STIELGREIHCQTVGTGLD-SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++I G +H G +DV V ALI MYA C + AR VFD++ +R N+ WN
Sbjct: 104 TSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVR--NLVSWN 161
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ GY K GD+++A LF+ + KNV+SWT +I G+ + + EA+ FR MQ+ V P
Sbjct: 162 TMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVP 221
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D + ++A +SACA LGA+ LG W+H + + V + N+LIDMYA+ G I A QVF
Sbjct: 222 DFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVF 281
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M +++++W ++I G A++GL +AL F M++ ++PN +++ + L+AC H GL++
Sbjct: 282 DGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLID 341
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G + F +K + P+IE YGC++DL RAG L+EA ++++MP N + GSLLAA
Sbjct: 342 EGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAA 401
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
GDVEL E +++ ++L P NY + SNIYA +G+W+ + K+R+ M++ G++K
Sbjct: 402 CRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNL 461
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 504
S IE+ +H+FV+GD H + D +Y L ++ ++ ++ +FSG ESDV
Sbjct: 462 AFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSFELHLYGYVP-DFSGK-ESDV 515
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 41/270 (15%)
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
N +L +SWT+ I+ + + + +A + F +M V+P+ I ++ LSAC
Sbjct: 38 NQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSAC 97
Query: 221 AQ---LGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGK--------------- 260
A ++ G +H + ++G +N ++ + ALIDMYAK GK
Sbjct: 98 AHSPSKTSITFGAALHTHAFKHGFAMNDVM-VGTALIDMYAKCGKLDYARLVFDQMGVRN 156
Query: 261 ----------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ AL++F+ + K+V++WT +I G EAL+ F M+
Sbjct: 157 LVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQL 216
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
A V P+ +T IAI+SAC ++G + LG +MK + ++ +ID+ R G +
Sbjct: 217 AGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEF--RDNVKVLNSLIDMYARCGCI 274
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ A ++ M + N W S++ + G
Sbjct: 275 ELARQVFDGMS-QRNLVSWNSIIVGFAVNG 303
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 161/393 (40%), Gaps = 103/393 (26%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI------ 67
+ ID + G DYA +F ++ +NT I + + +A+ L++K+
Sbjct: 130 TALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVV 189
Query: 68 -------------------------QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQT 102
Q + + PD + ++ A L + LG +H
Sbjct: 190 SWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLV 249
Query: 103 VGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+ +V V+ +LI MYA C CI AR+VFD +S R N+ WN+++ G+A
Sbjct: 250 MKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQR--NLVSWNSIIVGFA------- 300
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
+ G A ++A++ FR M+ E ++P+ ++ +AL+AC+
Sbjct: 301 -------------------VNGLA-----DKALSFFRSMKKEGLEPNGVSYTSALTACSH 336
Query: 223 LGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 281
G ++ G I I++ N+ + L+D+Y+++G++
Sbjct: 337 AGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRL-------------------- 376
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
+EA D+ +M + PNE+ ++L+AC G VEL + +MK +
Sbjct: 377 -----------KEAWDVIKKMP---MMPNEVVLGSLLAACRTQGDVELAEK---VMKYQV 419
Query: 342 GIEPKIE-QYGCMIDLLGRAGYLQEAEKLLRRM 373
+ P + Y ++ G A K+ R M
Sbjct: 420 ELYPGGDSNYVLFSNIYAAVGKWDGASKVRREM 452
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+ L + + ++WT+ I+ + +A F +M A V+PN IT I +LSAC
Sbjct: 39 QTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACA 98
Query: 323 H----VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
H + + + K + + + +ID+ + G L A + +M N
Sbjct: 99 HSPSKTSITFGAALHTHAFKHGFAMN-DVMVGTALIDMYAKCGKLDYARLVFDQMGVR-N 156
Query: 379 AAIWGSLLAASNIYGDVE 396
W +++ GDV+
Sbjct: 157 LVSWNTMIDGYMKNGDVD 174
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/495 (34%), Positives = 282/495 (56%), Gaps = 34/495 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V GL + L ++ +D ++ G +A +F K +V+L+N I+A + A
Sbjct: 88 LLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVA 147
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY + + PDN+++P LKA L +E GRE+H + +GT D+ V A L+ M
Sbjct: 148 IQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDM 207
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C C+ ++ARA+F+ + ++ + W +
Sbjct: 208 YAKCGCV---------------------------------DDARAVFDRIRVRDSVVWNS 234
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+IA Y Q +P EA++L R M V P +++ +SA A A+ G +H + + G
Sbjct: 235 MIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRG 294
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ L +L+DMYAKSG + A +FE + + +++W MI G +HG EAL +F+
Sbjct: 295 FDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFN 354
Query: 301 RME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M A+V P+ ITF+ +LSAC H G+V+ + +F +M Y I+P ++ + C++D+LG
Sbjct: 355 KMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGH 414
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG +EA L++ MP + ++ IWG+LL I+ +VELGE ALQ LI+LEP ++GNY +L
Sbjct: 415 AGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLL 474
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIYA G+W ++ ++RK+M + G+KK+ GCS+IE+ + H F+ GD SHP +Y+ L
Sbjct: 475 SNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEEL 534
Query: 480 CKINGQMKFAEHLQN 494
++ G M A ++ +
Sbjct: 535 ERLEGLMSDAGYMPD 549
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
+ L +C ++ G +H + GL L L+D+YA G +G A ++F+ M +
Sbjct: 67 SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKR 126
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-Y 333
+V W +I A G A+ ++ M V+P+ T+ L AC + +E GR +
Sbjct: 127 NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVH 186
Query: 334 FNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
++ + +G + + C ++D+ + G + +A + R+ ++ +W S++AA
Sbjct: 187 ERVLGTHWG----EDMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSMIAA 238
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/470 (37%), Positives = 270/470 (57%), Gaps = 7/470 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +R L N+++S F+ S G A +F + DV +NT + Q N A
Sbjct: 108 MHLRNLYSWNNMVSGFVKS----GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ + +++ S ++ + +SF +L A VK ++L ++ H Q + G S+V + ++I
Sbjct: 164 LWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A++ FDE++++ ++ +W T+++GYAK+GD+ A LF M EKN +SWT
Sbjct: 224 YAKCGQMESAKRCFDEMTVK--DIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTA 281
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LIAGY + + A+ LFR+M VKP++ + L A A + ++ G+ IH Y+ +
Sbjct: 282 LIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTN 341
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHGLGREALDMF 299
+ + ++LIDMY+KSG + + +VF +K + W TMI+ LA HGLG +AL M
Sbjct: 342 VRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQML 401
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + RV PN T + IL+AC H GLVE G R+F M ++GI P E Y C+IDLLGR
Sbjct: 402 DDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG +E + MPFE + IW ++L I+G+ ELG+ A + LIKL+P +S Y +L
Sbjct: 462 AGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILL 521
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
S+IYA G+W K+R +M+ V K S+IE+ +V F D SH
Sbjct: 522 SSIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKVKAFTVSDGSH 571
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 185/384 (48%), Gaps = 48/384 (12%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
+++ G+ IH TG +++ LI MY C DA KVFD++ LR N+ WN
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR--NLYSWNN 118
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
MV+G+ K G L AR +F+ M E++V+SW T++ GYAQ +EA+ F+ ++ +K +
Sbjct: 119 MVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFN 178
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E + L+AC + ++L + H + G + V L+ ++ID YAK G++ A + F+
Sbjct: 179 EFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 270 NMKNKSV-------------------------------ITWTTMIAGLALHGLGREALDM 298
M K + ++WT +IAG G G ALD+
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDL 298
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M RVKP + TF + L A + + G++ M R + P +ID+
Sbjct: 299 FRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYM-IRTNVRPNAIVTSSLIDMYS 357
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL---IKLEPH-NSG 414
++G L+ +E++ R + + +W ++++A +G LG ALQ L IK H N
Sbjct: 358 KSGSLEASERVFRICYDKQDCVLWNTMISALAQHG---LGHKALQMLDDMIKFRVHPNRT 414
Query: 415 NYAILSNIYAILG------RWNES 432
++ N + G RW ES
Sbjct: 415 TLVVILNACSHSGLVEEGVRWFES 438
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 121/266 (45%), Gaps = 40/266 (15%)
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+L++ +A + ++A++ + + ++ + + L C +++ G+WIH +++
Sbjct: 16 SLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 240 GL---NTIVPLNNALIDMYAKSGK-------------------------------IGKAL 265
G NT+ L+N LI MY K GK + +A
Sbjct: 76 GFKRPNTL--LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRAR 133
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VF++M + V++W TM+ G A G EAL F + R+ +K NE +F +L+AC
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSR 193
Query: 326 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
++L ++ + ++ + G + +ID + G ++ A++ M + + IW +
Sbjct: 194 QLQLNQQAHGQVLVA--GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTT 250
Query: 385 LLAASNIYGDVELGECALQHLIKLEP 410
L++ GD+E + + + + P
Sbjct: 251 LISGYAKLGDMEAADKLFREMPEKNP 276
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 283/519 (54%), Gaps = 68/519 (13%)
Query: 32 IFTHKSKPD--VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKL 89
IF P +L NT ++A P AV L++ + + D++++ F++KA+
Sbjct: 112 IFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMP----QRDSFTYSFLIKALSSS 167
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---VWNVAV 146
L R +H V G D +V ALI Y+ DA KVF+E+ R WN A+
Sbjct: 168 GLTPL-RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAM 226
Query: 147 --------------------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
WNT++ GY K G + +A LF+ M E+NV+SW+T
Sbjct: 227 AAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWST 286
Query: 181 LIAGY-------------------------------AQMDQPNEAITLFRRMQVENVKPD 209
+++GY AQ EA LF +M+ V+ D
Sbjct: 287 VVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELD 346
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
A+++ L+ACA+ G++ LG+ IH Y+ L + NA+IDM+ K G + +A VF+
Sbjct: 347 VAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFD 406
Query: 270 N-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ K ++W T+I G A+HG G +ALD F++M+ +P+ +T I +LSAC H+G VE
Sbjct: 407 TEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVE 466
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR++F+ M+ YGI P+IE YGCMIDLLGR G ++EA L++ MP++ N IWGSLL+A
Sbjct: 467 EGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSA 526
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++ K R M+ G +K
Sbjct: 527 CRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSA 586
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G S+IE+ + HEF GD H D D++ +++ +++ +K
Sbjct: 587 GSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLSSHVK 625
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 36/266 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A IF ++ + + A Q A L+ +++ +A+ D + +L A
Sbjct: 298 EMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAAC 357
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD-ELSLRVWNVA 145
+ ++ LG+ IH L HV A+I M+ C C+ A VFD E++ + +
Sbjct: 358 AESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEK--DSV 415
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WNT++ G+A G ++A+ F +M+++
Sbjct: 416 SWNTIIGGFAMHG-------------------------------HGDKALDFFAQMKLQG 444
Query: 206 VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+PD + M+ LSAC +G VE G + N YG+ + +ID+ + G I +A
Sbjct: 445 FRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEA 504
Query: 265 LQVFENMK-NKSVITWTTMIAGLALH 289
+ + ++M + + + W ++++ LH
Sbjct: 505 VGLIKSMPWDPNEVIWGSLLSACRLH 530
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 36/348 (10%)
Query: 69 ASALRP-DNYSFPFVLKAVVK-LSTIELG-------REIHCQTVGTGLDSDVHVVAALIQ 119
ASALRP + P + V + L+++ G +E+H Q + GL D + LI
Sbjct: 39 ASALRPAPRWGAPSQRRLVEQHLASLPHGLQHLHHVQELHAQLLKHGLHLDPLAASKLIS 98
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA + + +R++F + NT++ YA + A +LF M +++ +++
Sbjct: 99 SYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQRDSFTYS 158
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVK----PDEIAMLAALSACAQLGAVELGEWIHNY 235
LI + + +T R + VK D A + A ++ G +
Sbjct: 159 FLIKALS-----SSGLTPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKV--- 210
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
E+ V N+A+ M + G++ A ++F+ M +K ++W T++ G G +A
Sbjct: 211 FEEMPRRDTVSWNSAMAAM-VRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDA 269
Query: 296 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
++F M ER N +++ ++S C G +E+ R F+ M ++ + + M+
Sbjct: 270 FELFQCMPER-----NVVSWSTVVSGYCKKGDIEMARVIFDKMPTK-----NLVTWTIMV 319
Query: 355 DLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGE 399
+ G ++EA +L +M E + A S+LAA G + LG+
Sbjct: 320 SACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGK 367
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/426 (37%), Positives = 263/426 (61%), Gaps = 8/426 (1%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F + P ++ +KA P A+ L+ + + D Y+F F L+A
Sbjct: 52 AHQVFDRRPTP----WHALLKAYSHGPFPQEALNLFRDAHRN-MADDTYAFMFSLRACAG 106
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L+ G ++H + G + +V +LI Y C C+ DAR FDE+ ++ NV WN
Sbjct: 107 LAWPWTGAQLHGLVIRKGFEFHAYVHTSLINTYVVCGCLVDARMAFDEMPVK--NVVSWN 164
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
M+ G+A G++ AR LFE M +NV+SWT LI GY + EA+ L RRM E + P
Sbjct: 165 VMITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAEGISP 224
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
EI +LA + A + +G + +GE +H Y E+ GL + + N+LID+YAK G I +L+VF
Sbjct: 225 TEITVLAVVPAISDIGRILMGETLHGYCEKNGLVLDIRVGNSLIDLYAKIGSIQSSLKVF 284
Query: 269 ENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
M N+ ++++WT++I+G A+HGL EA+++F+ M R+ ++PN +TF+++L+AC H GLV
Sbjct: 285 HGMLNRRNLVSWTSIISGFAMHGLSTEAVELFAEMRRSGIRPNRVTFLSVLNACSHGGLV 344
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E G +F M Y I P+I+ +GC+ID+LGRAG L EAE+++ +P E N+ +W +LLA
Sbjct: 345 EQGVEFFKSMVYEYNINPEIKHFGCIIDMLGRAGRLCEAEQVIGGLPMEVNSIVWRTLLA 404
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
+ YG+VE+G+ A++ ++ E + G++ ++SN+ LGR++++ + RK++ + K+
Sbjct: 405 CCSKYGEVEMGKRAMKKILHTERESGGDFVVVSNMLTELGRFSDAERSRKLLDERNAVKV 464
Query: 448 PGCSYI 453
PG + +
Sbjct: 465 PGLALV 470
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 37/283 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+YA +F +V + I ++ + + AV L ++ A + P + V+ A+
Sbjct: 177 EYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAEGISPTEITVLAVVPAI 236
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ I +G +H GL D+ V +LI +YA I + KVF + L N+
Sbjct: 237 SDIGRILMGETLHGYCEKNGLVLDIRVGNSLIDLYAKIGSIQSSLKVFHGM-LNRRNLVS 295
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W ++++G+A G EA+ LF M+ +
Sbjct: 296 WTSIISGFAMHG-------------------------------LSTEAVELFAEMRRSGI 324
Query: 207 KPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+P+ + L+ L+AC+ G VE G E+ + + +Y +N + +IDM ++G++ +A
Sbjct: 325 RPNRVTFLSVLNACSHGGLVEQGVEFFKSMVYEYNINPEIKHFGCIIDMLGRAGRLCEAE 384
Query: 266 QVFENMKNK-SVITWTTMIAGLALHG---LGREALDMFSRMER 304
QV + + + I W T++A + +G +G+ A+ ER
Sbjct: 385 QVIGGLPMEVNSIVWRTLLACCSKYGEVEMGKRAMKKILHTER 427
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/461 (38%), Positives = 269/461 (58%), Gaps = 36/461 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQ-TDNPLN 59
+ + G + N L + I C+ +YA ++F KPD +L+NT I+ T + N
Sbjct: 35 IFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHN 94
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ + ++Q A RPDN++F F+LK + +L + LG+++HC G ++ +V +LI
Sbjct: 95 AIHFFKRMQL-AHRPDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIH 153
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY K I A ++F+E+ N+ WN+++ + G N A LF M +
Sbjct: 154 MYGMLKDIEIAHQLFEEMYQP--NLVSWNSIIDCHVYCGKYNEAIDLFTKMVQ------- 204
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
Q + + L +PD ++ LSAC +G+++ G +H+++
Sbjct: 205 ----------QQHNGMEL---------QPDHATLVVTLSACGAIGSLDFGRKVHSFVRD- 244
Query: 240 GLNTI---VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
G+N+ + + NAL+DMYAK G + +A + F NMK K+V++W MI G A HG G EAL
Sbjct: 245 GVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEAL 304
Query: 297 DMFSRMERARV-KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+F+RM V +P+EITF+ +L AC H GLV+ GRRYF IM Y I+P I+ YGCM+D
Sbjct: 305 ALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVD 364
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG EA +L++ MP E NA IW +LLAA YG+VELGE +HL++LEP +S +
Sbjct: 365 LLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSD 424
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKK-MPGCSYIEV 455
Y +L+N+YA G+WNE K R+ M++ V+K PG S+I +
Sbjct: 425 YVLLANMYASTGQWNEMSKERRSMQERRVRKPEPGNSFIGI 465
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 7/178 (3%)
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E ++ + C+ L ++ IH I G N + L+ +I A S + AL VF+
Sbjct: 12 EQTLMNLFNHCSTLNHLK---QIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFD 68
Query: 270 NMKNKSVITWTTMIAGLALHGL-GREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ W TMI G A+ F RM+ A +P+ TF IL + V
Sbjct: 69 KIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAH-RPDNFTFSFILKIIARLRFVN 127
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
LG++ + ++G E +I + G ++ A +L M ++ N W S++
Sbjct: 128 LGKQ-LHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEM-YQPNLVSWNSII 183
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 279/530 (52%), Gaps = 72/530 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A+ IF + +V L+N + A Q + + ++ ++QA+ + P+ +++P +L+
Sbjct: 297 ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTC 356
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
IELG +IH ++ G +SD++V LI MY+ +C+ ARK+ + L R +V
Sbjct: 357 TCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKR--DVVS 414
Query: 147 WNTMVAGYAKVGDLNNARALFELMTE---------------------------------- 172
W +M+AGY + A A F+ M +
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY 474
Query: 173 -----KNVISWTTLIAGYAQMDQPNEAITLFR---------------------------- 199
++ W TL+ YA+ + EA +LFR
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALM 534
Query: 200 ---RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
+M K + ++A+SA A L ++ G+ +H + G + + NALI +Y
Sbjct: 535 VFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYG 594
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G I A +F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI
Sbjct: 595 KCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIG 654
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L+AC HVGLVE G YF M + YG+ P + Y C++D+LGRAG L A + + MP
Sbjct: 655 VLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPIT 714
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
ANA IW +LL+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ G+W ++R
Sbjct: 715 ANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVR 774
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
K+M+D G++K PG S+IEV VH F GD HP D++Y+ L ++N ++
Sbjct: 775 KMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL 824
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 178/406 (43%), Gaps = 43/406 (10%)
Query: 23 LGFSDY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
LGF + A +F D +NT I Q + A+ +++++Q S LRPD +
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A + ++ G+++H + G+ D +L+ +Y C
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC---------------- 293
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
GD+ A +F L NV+ W ++ Y Q+ ++ +F +
Sbjct: 294 -----------------GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQ 336
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
MQ + P++ L C G +ELGE IH+ + G + + ++ LIDMY+K
Sbjct: 337 MQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRC 396
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ KA ++ E ++ + V++WT+MIAG H EAL F M+ V P+ I + SA
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASA 456
Query: 321 CCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
C + + G + + + S Y + I + +++L R G +EA L R + + +
Sbjct: 457 CAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLFREIDHK-DE 513
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
W L++ +G L E AL +K+ Y + + I AI
Sbjct: 514 ITWNGLISG---FGQSRLYEQALMVFMKMS-QAGAKYNVFTFISAI 555
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 166/387 (42%), Gaps = 35/387 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+VRGL + + + ID + G A +F S D + + Q A
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAF 129
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY+++ +A+ P Y VL A K GR IH Q S+ V ALI +Y
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY 189
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
G A +F M + +++ TL
Sbjct: 190 LG---------------------------------FGSFKLAERVFCDMLFCDRVTFNTL 216
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+G+AQ A+ +F MQ+ ++PD + + + L+ACA +G ++ G+ +H+Y+ + G+
Sbjct: 217 ISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGM 276
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ +L+D+Y K G I A +F +V+ W M+ ++ ++F +
Sbjct: 277 SFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQ 336
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ + PN+ T+ IL C G +ELG + + + + G E + G +ID+ +
Sbjct: 337 MQATGIHPNKFTYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYR 395
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAA 388
L +A K+L + + + W S++A
Sbjct: 396 CLDKARKILEMLE-KRDVVSWTSMIAG 421
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 35/268 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G S+ A+S+F D +N I Q+ A++++ K+ + + + ++F +
Sbjct: 496 GRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAI 555
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A+ L+ I+ G+++H + V TG S+ V ALI +Y C I DA+ +F E+SLR N
Sbjct: 556 SALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR--N 613
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WNT++ ++ G R L EA+ LF +M+
Sbjct: 614 EVSWNTIITSCSQHG-----RGL--------------------------EALDLFDQMKQ 642
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E +KP+++ + L+AC+ +G VE G + + YGLN I ++D+ ++G++
Sbjct: 643 EGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLD 702
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALH 289
+A + + M + + W T+++ +H
Sbjct: 703 RARRFVDEMPITANAMIWRTLLSACKVH 730
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N ++ YAK G + AR +F+ ++ ++ +SW +++GYAQ EA L+ +M V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P + + LSAC + G IH + + + + NALI +Y G A +V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F +M +T+ T+I+G A G G AL +F M+ + ++P+ +T ++L+AC VG +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G++ + + + G+ G ++DL + G ++ A + + N +W +L
Sbjct: 262 QKGKQLHSYLL-KAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLV 319
Query: 388 ASNIYGDV 395
A YG +
Sbjct: 320 A---YGQI 324
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-----IHNYI 236
+A + D P + ++L + + AL AC G W IH
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRG----NRWPLVLEIHATS 69
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
GL + N LID+YAK+G + +A QVF+ + ++ ++W M++G A GLG+EA
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAF 129
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID 355
++S+M V P ++LSAC L GR + + K + E + +I
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN--ALIA 187
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
L G + AE++ M F + + +L++ G GECALQ
Sbjct: 188 LYLGFGSFKLAERVFCDMLF-CDRVTFNTLISGHAQCGH---GECALQ 231
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 266/449 (59%), Gaps = 35/449 (7%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
D + NT ++ + P A+ L+ + A PD +++P +++A +L + G +H
Sbjct: 83 DPFPLNTVLRIAAGSPRPRVALELHRRRLAL---PDTHTYPPLIQACARLLALREGECLH 139
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ G + V V +L+ +Y +C A KVFDE+ +R
Sbjct: 140 AEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVR------------------- 180
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+N++SW +++ +A +PNE +T+F M + PD +++ L+A
Sbjct: 181 ------------GRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTA 228
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVIT 278
CA+ GA+ LG +H Y+E+ GL ++NALID+YAK G + A ++FE M ++V++
Sbjct: 229 CAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVS 288
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
WT++I GLA +G G+EAL++FS MER ++ P EIT + +L AC H GLV+ G RYF+ MK
Sbjct: 289 WTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMK 348
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
YGI P+IE GCM+DLLGRAG ++EA + MP E NA +W +LL + ++ +ELG
Sbjct: 349 EDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELG 408
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
+ A + L++L+P +SG+Y +LSN+YA +G W + +RK M V+K PG S +E+
Sbjct: 409 KVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNS 468
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMK 487
V+EFV GD SHP+ +++Y++L +I +++
Sbjct: 469 VYEFVMGDRSHPESEQIYEMLAEIAERLR 497
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/494 (36%), Positives = 284/494 (57%), Gaps = 8/494 (1%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + ++ + LG A +F + PD Y + I T P+ A +++K+
Sbjct: 38 LACKLVNRYAKLGNPRDAQKVFGYIQDPDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEG 97
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
LRPD++S L A K + G+ +H L ++ V ALI MY I A+
Sbjct: 98 LRPDSHSVVGALSACGKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQ 157
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF ++ ++ +V+ W +++ G+ L +AR +F+ M +N ++WT +I GY + P
Sbjct: 158 LVFKQMGIK--DVSSWTSLLNGFVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMP 215
Query: 192 NEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
+ +FR+M+ E +P I +A LS CA LGA + G+ +H YI + L+ V ++NA
Sbjct: 216 IRGLEMFRQMKAEGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVSNA 275
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
L+DMY+K G + A+++F+ + K V +WTTMI+ + HG G AL++F M + V PN
Sbjct: 276 LMDMYSKGGCVESAMKIFDRLVKKDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPN 335
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
++TF+ +LS C H GL+ + FN M YG EPKIE YGCM+DLL RAG L+EA++L+
Sbjct: 336 DVTFLLVLSGCSHSGLLVEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELI 395
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
MP + +A IW SLL+A ++ L E A + +I+LEPH+ G Y +LSNIY + R
Sbjct: 396 DNMPMDPDAVIWRSLLSACMNQRNLGLAEIAGKKIIELEPHDDGVYVLLSNIYHVANRMK 455
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
++ K+RK+M D V K P CSYIE++ VH+F + +H ++Y +L IN ++
Sbjct: 456 DARKMRKMMGDQKVMKKPACSYIELNGVVHQFHTENATHHASTKIYMLLEMINEHLR--- 512
Query: 491 HLQNEFSGVLESDV 504
L ++S +LE D+
Sbjct: 513 -LDTDYS-LLEMDL 524
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L +CA L ++ IH GL I PL L++ YAK G A +VF +++
Sbjct: 10 LQSCADLVTLK---QIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVFGYIQDPD 66
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
+T+T++I L +A +FS++ ++P+ + + LSAC + L + +
Sbjct: 67 RVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDL-LNGKLVH 125
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
M R+ + +ID+ R G ++ A+ + ++M + + + W SLL
Sbjct: 126 GMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIK-DVSSWTSLL 175
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 285/476 (59%), Gaps = 13/476 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + N +++ + G + A +F D YNT I L + ++ ++
Sbjct: 110 GFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRAGRAGCSMRIF 169
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHC---QTVGTGLDSDVHVVAALIQMY 121
+++ + PD Y+F +L A L +GR +H + +G ++++ +V AL+ MY
Sbjct: 170 AEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENEL-LVNALVDMY 228
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C C+ A +V + + VA W ++V+ YA G++ AR LF+ M E++V+SWT +
Sbjct: 229 AKCGCLEVAERVVRNGNGKS-GVAAWTSLVSAYALRGEVEVARRLFDQMGERDVVSWTAM 287
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE---- 237
I+GY EA+ LF ++ ++PDE+ ++AALSACA+LGA+ELG IH+ +
Sbjct: 288 ISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRIHHKYDRDSW 347
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN--KSVITWTTMIAGLALHGLGREA 295
Q G N A++DMYAK G I AL VF + K+ + ++++GLA HG G A
Sbjct: 348 QCGHNR--GFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGLAHHGRGEHA 405
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F M ++P+E+T++A+L AC H GLV+ G+R F M S YG+ P++E YGCM+D
Sbjct: 406 MALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVD 465
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG+L EA L++ MPF+ANA IW +LL+A + GDVEL A Q L+ +E +
Sbjct: 466 LLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDGDVELARLASQELLAMENDHGAR 525
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
Y +LSN+ ++ + +E+ +R+ + ++G++K PG S++E++ +H+F+AGD SHP+
Sbjct: 526 YVMLSNMLTLMDKHDEAASVRRAIDNVGIQKPPGWSHVEMNGTLHKFLAGDKSHPE 581
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 181/372 (48%), Gaps = 75/372 (20%)
Query: 1 MIVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+V G + L++ I + ++ +++ +FT PD++L+N I+A + P
Sbjct: 1 MVVTGRHHDPFLMTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPH 60
Query: 59 NAVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
NA+ LY K+ +S+ + PD ++FPF+LK+ KLS LG ++H +G +S+V VV A
Sbjct: 61 NALSLYKKMLSSSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNA 120
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+Q+Y +A +VFDE +R + +
Sbjct: 121 LLQVYFVFGDARNACRVFDESPVR---------------------------------DSV 147
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
S+ T+I G + + ++ +F M+ V+PDE +A LSAC+ L +G +H +
Sbjct: 148 SYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLV 207
Query: 237 EQ----YGLNTIVPLNNALIDMYAKS--------------------------------GK 260
+ +G N + L NAL+DMYAK G+
Sbjct: 208 YRKLGCFGENEL--LVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGE 265
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ A ++F+ M + V++WT MI+G G +EAL++F +E ++P+E+ +A LSA
Sbjct: 266 VEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSA 325
Query: 321 CCHVGLVELGRR 332
C +G +ELGRR
Sbjct: 326 CARLGALELGRR 337
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 157/316 (49%), Gaps = 17/316 (5%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN--VKPDEIAMLAAL 217
L+++ LF + ++ + +I ++ P+ A++L+++M + + PD L
Sbjct: 28 LHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFTFPFLL 87
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
+CA+L LG +H ++ + G + V + NAL+ +Y G A +VF+ + +
Sbjct: 88 KSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSV 147
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
++ T+I GL G ++ +F+ M V+P+E TF+A+LSAC + +GR ++
Sbjct: 148 SYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLV 207
Query: 338 KSRYGIEPKIEQY-GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G + E ++D+ + G L+ AE+++R ++ A W SL++A + G+VE
Sbjct: 208 YRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVE 267
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG--------VKKMP 448
+ A + ++ + ++ + + Y G + E+ ++ + D+G V +
Sbjct: 268 V---ARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALS 324
Query: 449 GCSY---IEVSKRVHE 461
C+ +E+ +R+H
Sbjct: 325 ACARLGALELGRRIHH 340
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 284/568 (50%), Gaps = 84/568 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLN 59
M++ G + ++ I+ S ++A SIF+ + +V+ +N I P
Sbjct: 63 MLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEE 122
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
Y K++ + PD ++FP +KA + + I ++IH GL+ DV + +AL+
Sbjct: 123 GFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVN 179
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV---------------------- 157
Y + A+ F+EL +R +V +WN MV GYA++
Sbjct: 180 CYLKFGLMEHAQVAFEELPIR--DVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSR 237
Query: 158 -------------GDLNNAR-----------------------------------ALFEL 169
GDLNN R +FE+
Sbjct: 238 FTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEM 297
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M EK++ SW ++++ + Q + + L RM ++PD + + L AC+ L A+ G
Sbjct: 298 MREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG 357
Query: 230 EWIHNYIEQYGLNTI------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
IH Y+ GL V L NA+IDMYAK G + A VFE M NK V +W MI
Sbjct: 358 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMI 417
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
G +HG G EAL+MFSRM ++KP+E+TF+ +LSAC H G V GR + MKS+Y +
Sbjct: 418 MGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDV 477
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
P IE Y C+ID+LGRAG L EA +L MP EAN +W +LLAA ++ L E A Q
Sbjct: 478 APTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQ 537
Query: 404 HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFV 463
+ +LEP + G+Y ++SN+Y +GR+ E ++R MR V+K PGCS+IE+ VH FV
Sbjct: 538 RVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFV 597
Query: 464 AGDTSHPDFDRLYQILCKINGQMKFAEH 491
+ D +HP+ +Y L + +++ EH
Sbjct: 598 SADRAHPEAHSIYAGLNSLTARLR--EH 623
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 270/539 (50%), Gaps = 72/539 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY +F + D+ +NT + Q AV + ++Q + +PD+ + VL AV
Sbjct: 196 AYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVAD 255
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + +GR IH G + V+V A++ Y C + AR VF +S R NV WN
Sbjct: 256 LKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSR--NVVSWN 313
Query: 149 TMVAGY-----------------------------------AKVGDLNNARALFELMTEK 173
TM+ GY A +GDL R + L+ EK
Sbjct: 314 TMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEK 373
Query: 174 -----------------------------------NVISWTTLIAGYAQMDQPNEAITLF 198
V++W +I GYAQ NEA+ LF
Sbjct: 374 KIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLF 433
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
MQ ++KPD +++ ++A A L +WIH + ++ V + ALID +AK
Sbjct: 434 CEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKC 493
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G I A ++F+ M+ + VITW MI G +G GREALD+F+ M+ VKPNEITF++++
Sbjct: 494 GAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVI 553
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+AC H GLVE G YF MK YG+EP ++ YG M+DLLGRAG L +A K ++ MP +
Sbjct: 554 AACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPG 613
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ G++L A I+ +VELGE L L+P + G + +L+N+YA W++ ++R
Sbjct: 614 ITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTA 673
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFS 497
M G++K PGCS +E+ VH F +G T+HP R+Y L + +MK A ++ + S
Sbjct: 674 MEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNS 732
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 36/342 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDS--CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I++ N HL + S C ++ A + K DV LY+T +K +
Sbjct: 66 LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDV-LYHTMLKGYAKNSTLR 124
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+AV Y +++ + P Y F ++L+ + + GREIH + G S++ + A++
Sbjct: 125 DAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVV 184
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+YA C+ I DA K+F+ + R ++ WNT+VAGYA+
Sbjct: 185 NLYAKCRQIEDAYKMFERMPQR--DLVSWNTVVAGYAQ---------------------- 220
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
G+A+ A+ + +MQ KPD I +++ L A A L A+ +G IH Y +
Sbjct: 221 ----NGFAR-----RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFR 271
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G +V + A++D Y K G + A VF+ M +++V++W TMI G A +G EA
Sbjct: 272 AGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFAT 331
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
F +M V+P ++ + L AC ++G +E GR ++ +
Sbjct: 332 FLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEK 373
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+++ + K + A +FE + K + + T++ GYA+ +A+ + RM+ + V P
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
L + + G IH + G + + A++++YAK +I A ++FE
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M + +++W T++AG A +G R A+ + +M+ A KP+ IT +++L A + + +
Sbjct: 202 RMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRI 261
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
GR R G E + M+D + G ++ A + + M N W +++
Sbjct: 262 GRSIHG-YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMS-SRNVVSWNTMIDGY 319
Query: 390 NIYGDVE 396
G+ E
Sbjct: 320 AQNGESE 326
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 269/473 (56%), Gaps = 1/473 (0%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I + +G A + DV + + I A + D AV + + + + PD+
Sbjct: 119 ISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDD 178
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ VL A +L +ELG +H G+ ++V ALI MYA C AR+VFD
Sbjct: 179 VTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDA 238
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R WN ++ GY K G ++ AR+LF+ M +++I++ ++I GY Q EA+
Sbjct: 239 VG-RGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALL 297
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LF M+ +++ D +++ LSACA LGA+ G +H IE + T + + AL+DMY
Sbjct: 298 LFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM 357
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G++ +A VF+ M + V WT MIAGLA +G+G+ L+ F +M +PN +++IA
Sbjct: 358 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 417
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L+AC H L+ GR YF+ M+ Y I P+IE YGCMIDLLGR+G L EA L++ MP +
Sbjct: 418 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQ 477
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
N+ IW S+L+A ++ ++L +CA +HL+K+EP Y L NI +W ++ KIR
Sbjct: 478 PNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIR 537
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+M + VKK G S + V+ +VH+FV D SHP + +L +I+ ++K A
Sbjct: 538 MLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSA 590
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 205/407 (50%), Gaps = 45/407 (11%)
Query: 41 VYLYNTTIKAL----CQTDNPLNAVILYNKIQASALRPDNYSFPFVLK-AVVKLSTIELG 95
+L++T ++A + +P +L+ +++ +A+RPD ++F F+ K + L
Sbjct: 5 TFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLC 64
Query: 96 REIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY 154
+H + T L S VA +LI MY D R+ FDE+ ++ + W +++G
Sbjct: 65 TMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVK--DAVSWTMVISGL 122
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
AK+G L++AR L ++VISWT+LIA Y++ D+ EA+ F+ M E + PD++ ++
Sbjct: 123 AKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVI 182
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV------- 267
LSAC+QL +ELG +H +++ G++ L ALIDMYAK G G A +V
Sbjct: 183 GVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRG 242
Query: 268 -------------------------FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
F+ M+ + +IT+ +MI G G REAL +F M
Sbjct: 243 RRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNM 302
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R ++ + T +++LSAC +G + GR ++ R +E I ++D+ + G
Sbjct: 303 RRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRL-VETDIYIGTALLDMYMKCGR 361
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ EA + +RM + + W +++A G +G+ L++ ++
Sbjct: 362 VNEATIVFQRMG-KRDVHAWTAMIAGLAFNG---MGKAGLEYFYQMR 404
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 200/456 (43%), Gaps = 37/456 (8%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
+ N L + +D S++G S DV +N+ + + AV
Sbjct: 865 IPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLK 924
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLD-SDVHVVAALIQMYASC 124
++ P SF +L K +LG +IH G S VHV LI MY C
Sbjct: 925 QMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKC 984
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
C +++ A+F + + +LI
Sbjct: 985 CC---------------------------------FDHSLAIFNEIPSIALECCNSLITS 1011
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG--EWIHNYIEQYGLN 242
+ + A+ + M VE V PD++ A + A + + L + +H+ + + G
Sbjct: 1012 SLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFE 1071
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + ++LI YA +G++ + +FE + + +VI +T +I+ A +G G A+++F +M
Sbjct: 1072 MDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQM 1131
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ +KP+ +TF+ ++ C G+ E GR +M++ ++P + CM++LL R G+
Sbjct: 1132 VSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGF 1191
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
++EA +++ + P W SLL + +G+ LG+ A LI + + +SN
Sbjct: 1192 VKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNF 1251
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
+ +G + +I+++ VKK G S IEVS R
Sbjct: 1252 FNDIGDRETALRIKEMTNVKEVKK-SGHSLIEVSHR 1286
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
DV N I + A +Y + AS +R ++F +L ++L H
Sbjct: 699 DVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL----H 754
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ + GL + V +AL+ Y + + A +F EL L+ N A+ N ++ G +G+
Sbjct: 755 GRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQ--NTAMCNVVLRG---LGN 809
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L +TE E I F M+ + ++ + ++ A+
Sbjct: 810 LK--------LTE--------------------ELICCFLDMRRQYLELNGLSYCYAMKG 841
Query: 220 CAQLGA-VELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
C Q G +E G +H + + G + + + L+N+L+D+Y+ G ++ ++ ++ VI
Sbjct: 842 CYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVI 901
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+W ++++ A G +EA+ +M P+ +F+++L+ G +LG + I+
Sbjct: 902 SWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIV 961
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+ +ID+ G+ + + +P
Sbjct: 962 HKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIP 998
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + + S I + + G ++ IF P+V + I A + + A+ L+
Sbjct: 1069 GFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELF 1128
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGR-EIHCQTVGTGLDSDVHVVAALIQMYAS 123
+++ +S L+PDN +F + + E GR I LD D A ++ + +
Sbjct: 1129 DQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSR 1188
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ +A ++ ++ LR + A W++++
Sbjct: 1189 DGFVKEAMEMMEQSPLRHYTKA-WSSLL 1215
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 264/449 (58%), Gaps = 6/449 (1%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE--LGREIHCQ 101
+ + I L + A ++ ++ + + P++ +F +L + LG +H
Sbjct: 39 WTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDLLHGY 98
Query: 102 TVGTGLDSD-VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
GLD + V V A+I MY+ + AR VFD + + N WNTM+ GY + G +
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDK--NSVTWNTMIDGYMRSGQV 156
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
+NA +F+ M E+++ISWT +I G+ EA+ FR MQ+ VKPD +A++AAL+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAALNAC 216
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
LGA+ G W+H Y+ V ++N+LID+Y + G + A QVF+ M+ ++V++W
Sbjct: 217 TNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWN 276
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
++I G A +G E+L F +M+ R KP+ +TF L+AC HVGLVE G RYF IM S
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYFQIMISD 336
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGE 399
Y I P+IE YGC++DL RAG L++A KL++ MP + N + GSLLAA +G + L E
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNHGNNTVLAE 396
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
++HL L + NY ILSN+YA G+W + K+R+ M+ +G+KK PG S IE+
Sbjct: 397 KLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCT 456
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMKF 488
H F+AGD++H + + ++L I+ ++
Sbjct: 457 HVFMAGDSAHVETTNICEVLKLISSNLRL 485
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 35/286 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D+N+ + ID G D A +F + D+ + I A+ + +
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFRE 196
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S ++PD + L A L + G +H + ++V V +LI +Y C C
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VFD++ R V WN+++ G+A G+
Sbjct: 257 VEFARQVFDKMEKRT--VVSWNSVIVGFAANGN--------------------------- 287
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIV 245
+E++ FR+MQ E KPD + AL+AC+ +G VE G + I Y ++ +
Sbjct: 288 ----AHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYFQIMISDYRISPRI 343
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
L+D+Y+++G++ AL++ ++M K + + +++A HG
Sbjct: 344 EHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNHG 389
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 228
T +N +SWT+ I + + EA F M++ V+P+ I +A LS C G+ L
Sbjct: 32 TSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEAL 91
Query: 229 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKS------------ 275
G+ +H Y + GL+ V + A+I MY+K G++ KA VF+ M++K+
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYM 151
Query: 276 -------------------VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
+I+WT MI G G EAL F M+ + VKP+ + IA
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIA 211
Query: 317 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
L+AC ++G + G RY +M + ++ +IDL R G ++ A ++ +M
Sbjct: 212 ALNACTNLGALSFGLWVHRY--VMSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFDKM 267
Query: 374 PFEANAAIWGSLLAA 388
+ W S++
Sbjct: 268 E-KRTVVSWNSVIVG 281
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 44/160 (27%)
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC--- 321
+Q +++ ++WT+ I L +G EA FS M A V+PN ITFIAILS C
Sbjct: 25 IQRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDF 84
Query: 322 ---------------CHVGL--------------------VELGRRYFNIMKSRYGIEPK 346
C +GL V+ R F+ M+ + +
Sbjct: 85 PSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSV--- 141
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ MID R+G + A K+ +MP E + W +++
Sbjct: 142 --TWNTMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAMI 178
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 269/481 (55%), Gaps = 35/481 (7%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I+ GL + L+++ + + ++ Y +F KPD +L+++ I + P
Sbjct: 42 IIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQE 101
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+++ Y ++ + + NY+F V+K+ L+ +G IHC G D +V AAL+
Sbjct: 102 SLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVS 161
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA K G + AR +F+ M EK V++W
Sbjct: 162 FYA---------------------------------KSGHVMIARKVFDKMPEKTVVAWN 188
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++I+GY Q EA+ LF MQ VKPD ++ LSACAQ+GA+ LG W+H YI +
Sbjct: 189 SMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARN 248
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ V L AL++MY++ G + KA +VF++M+ K+++ WT MI+G +HG G +A+++F
Sbjct: 249 CFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELF 308
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+ M +PN +TF+A+LSAC H GLV+ GR+ F MK YG+ P +E CM+D+LGR
Sbjct: 309 NEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGR 368
Query: 360 AGYLQEAEKLLRRM-PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
AG+L EA + ++ P E A+W ++L A ++ + +LG +HL+ +EP N G+Y +
Sbjct: 369 AGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVM 428
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNIYA+ GR + KIR +M +KK G S I+V +V+ F GD SHP +++Y
Sbjct: 429 LSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLY 488
Query: 479 L 479
L
Sbjct: 489 L 489
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 231/352 (65%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++A+ +V Y K G++ +ARA+F+ M K+V++WT +I+ YAQ + + A LF +M+
Sbjct: 266 SLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMR 325
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
V+P+E+ M++ LS CA GA+++G+W H YI++ G+ V L ALIDMYAK G I
Sbjct: 326 DNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDIS 385
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A ++F ++ + TW M+AG +HG G +AL +F+ ME VKPN+ITFI L AC
Sbjct: 386 GAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACS 445
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLV G+ F M +G+ PK+E YGCM+DLLGRAG L EA K++ MP N AIW
Sbjct: 446 HAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIW 505
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G++LAA I+ + +GE A + L+ LEP N G ++SNIYA RWN+ +RK ++D
Sbjct: 506 GAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDT 565
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
G+KK PG S IEV+ VH+F GDT+HP +++ ++L +++ ++K A +L +
Sbjct: 566 GIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPD 617
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 200/354 (56%), Gaps = 16/354 (4%)
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
+P A+ Y ++ + D++ P VLKA ++S +G+EIH +V GL SDV VV
Sbjct: 89 HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
AL+QMY+ C + AR +FD++S R +V W+TM+ Y LF +++++
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSER--DVVSWSTMIRAYI---------TLFYGFSQRSI 197
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT +IAGY + + E LF RM ENV P++I ML+ + +C +GAV+LG+ +H Y
Sbjct: 198 VSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAY 257
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I + G + L AL+DMY K G+I A +F++MKNK V+TWT MI+ A A
Sbjct: 258 ILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYA 317
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+F +M V+PNE+T +++LS C G +++G ++F+ + G+E + +ID
Sbjct: 318 FQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALID 376
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
+ + G + A++L + + W ++A ++G GE AL+ ++E
Sbjct: 377 MYAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMHG---YGEKALKLFTEME 426
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 271/467 (58%), Gaps = 36/467 (7%)
Query: 40 DVYLYNTTIKALCQTDNP---LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR 96
D +L NT I+A + P L A + + SA P+ ++FPF+LKA + G
Sbjct: 107 DAFLANTLIRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACAAFPGV--GV 164
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
+ H + G +D +V LI MY SC G
Sbjct: 165 QAHAAALKFGFTTDQYVSNTLIHMY-SC---------------------------FGGEF 196
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
+GD AR +F+ M + + ++W+ +I GY + ++A+ LFR MQ V+PDE+ M+
Sbjct: 197 LGD---ARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGV 253
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L+A A LGA+EL W+ ++E+ G+ V L NALID AK G + A+ VF+ MK +++
Sbjct: 254 LAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKERTI 313
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
++WT++I LA+ G G+EA+ +F M+ A V+P+++ FI +L+AC H G+V+ G YF
Sbjct: 314 VSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYFES 373
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
M+ YGI+PKIE YGCM+D+ GRAG ++ A + + +MP + N IW +L+AA +G +E
Sbjct: 374 MRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHGRLE 433
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 456
LGE ++L+ P + NY +LSN+YA+ RW E +IR+ M G+KK+PGCS +E+
Sbjct: 434 LGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSLVELD 493
Query: 457 KRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
VHEF+AGD SHP + +Y ++ ++ +++ A H+ +L+ D
Sbjct: 494 GEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVLLDLD 540
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 41/277 (14%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
SC F A ++F +K ++ I ++ +AV L+ ++QAS +RPD +
Sbjct: 190 SCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVT 249
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
VL A L +EL R + G+ V + ALI A C
Sbjct: 250 MIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKC-------------- 295
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
GDL+ A A+F+ M E+ ++SWT++I A + EA+ +F
Sbjct: 296 -------------------GDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVF 336
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDM 254
M+ V+PD++A + L+AC+ G V+ G + Y E YG++ + ++DM
Sbjct: 337 EEMKTAGVRPDDVAFIGVLTACSHAGMVDEG---YGYFESMRMAYGIDPKIEHYGCMVDM 393
Query: 255 YAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
+ ++G + +A++ M K + I W T++A HG
Sbjct: 394 FGRAGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHG 430
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 279/489 (57%), Gaps = 40/489 (8%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL ++ S + +C S G DYA SIF + + +NT ++ + N A+I
Sbjct: 58 GLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALI 117
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
Y ++ ++PDN+++P +LKA +L +E G ++H + GL++DV V +LI M
Sbjct: 118 TYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISM-- 175
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
Y K G++ A+FE M E++V SW+ LI
Sbjct: 176 -------------------------------YGKCGEIGVCCAVFEQMNERSVASWSALI 204
Query: 183 AGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ--Y 239
+A + ++ + L M E + +E +++ LSAC LGA++LG +H ++ +
Sbjct: 205 TAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVS 264
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GLN IV +LI+MY K G + K + +F+ M K+ ++++ MI+GLA+HG GRE L +F
Sbjct: 265 GLNVIV--ETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIF 322
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+ M ++P++I ++ +L+AC H GLV+ G + FN MK +GIEP I+ YGCM+DL+GR
Sbjct: 323 TEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGR 382
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG + EA +L++ MP E N +W SLL+AS ++ +++ GE A + L KL+ + +Y +L
Sbjct: 383 AGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVL 442
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SN+YA RW + K R M G+ + PG S +EV +++H FV+ D HP + +Y++L
Sbjct: 443 SNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEML 502
Query: 480 CKINGQMKF 488
++ Q+KF
Sbjct: 503 YQMEWQLKF 511
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 261/461 (56%), Gaps = 33/461 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY IF + D +N I AL Q + + ++ +N++ ++PD++++ VLKA
Sbjct: 405 AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 464
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++E G +H + + +GL SD V + ++ MY CKC
Sbjct: 465 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY--CKC---------------------- 500
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G ++ A+ L + + + V+SW +++G++ + EA F M +KP
Sbjct: 501 ---------GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 551
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D L CA L +ELG+ IH I + + +++ L+DMYAK G + +L VF
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 611
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL +
Sbjct: 612 EKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFD 671
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 672 DGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSI 731
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK P
Sbjct: 732 CKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEP 791
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
GCS+IEV +H F+ GD +HP LY++L + G+MK +
Sbjct: 792 GCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 832
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 162/360 (45%), Gaps = 35/360 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F PDV +N + CQ +V L+ ++ + PD +F +LK+
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + LG ++H V TGL+ DV +AL+ MY C+
Sbjct: 162 LEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCR----------------------- 198
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
L++A F M E+N +SW IAG Q +Q + LF MQ +
Sbjct: 199 ----------SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 248
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + +A +CA + + G +H + + ++ + A++D+YAK+ + A + F
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF 308
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ N +V T M+ GL GLG EA+ +F M R+ ++ + ++ + SAC
Sbjct: 309 FGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYF 368
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G++ + + + G + I ++DL G+ L EA + + M + ++ W +++AA
Sbjct: 369 QGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 171/373 (45%), Gaps = 48/373 (12%)
Query: 45 NTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
N + L + + A+ L+ + S++R D S V A + G+++HC +
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
+G D D+ V A++ +Y CK + +A +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLI------------------------------- 408
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
F+ M +K+ +SW +IA Q ++ I F M +KPD+ + L ACA L
Sbjct: 409 --FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALR 466
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
++E G +H+ + + GL + + + ++DMY K G I +A ++ + + + V++W +++
Sbjct: 467 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 526
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGI 343
G +L+ EA FS M +KP+ TF +L C ++ +ELG++ + I+K
Sbjct: 527 GFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD 586
Query: 344 EPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ I ++D+ + G + ++ EK+ +R + W +++ ++G LG
Sbjct: 587 DEYISS--TLVDMYAKCGDMPDSLLVFEKVEKR-----DFVSWNAMICGYALHG---LGV 636
Query: 400 CALQHLIKLEPHN 412
AL+ +++ N
Sbjct: 637 EALRMFERMQKEN 649
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 17/315 (5%)
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHC-------QTVGTGLDSDVHVVAALIQM 120
Q + P +F V + S + GRE + V +G V L+QM
Sbjct: 7 QPPPVAPARVTFSRVFQ-----SCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQM 61
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C AR+VFD + R + WNTM+ Y+ GD++ A ALF+ M + +V+SW
Sbjct: 62 YARCAGAACARRVFDAMPRR--DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 119
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
L++GY Q E++ LF M V PD L +C+ L + LG +H + G
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L V +AL+DMY K + AL F M ++ ++W IAG + L++F
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFI 239
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+R + ++ ++ + +C + + GR+ + + +K+++ + + ++D+ +
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGT--AIVDVYAK 297
Query: 360 AGYLQEAEKLLRRMP 374
A L +A + +P
Sbjct: 298 ANSLTDARRAFFGLP 312
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 171/396 (43%), Gaps = 43/396 (10%)
Query: 5 GLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL+ + S +D C SL D A F + + + I Q + + +
Sbjct: 179 GLEIDVRTGSALVDMYGKCRSL---DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++Q L S+ ++ +S + GR++H + SD V A++ +Y
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A K L +AR F + V + +
Sbjct: 296 A---------------------------------KANSLTDARRAFFGLPNHTVETSNAM 322
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ G + EA+ LF+ M +++ D +++ SACA+ G+ +H + G
Sbjct: 323 MVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF 382
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + +NNA++D+Y K + +A +F+ MK K ++W +IA L +G + + F+
Sbjct: 383 DVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNE 442
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRA 360
M R +KP++ T+ ++L AC + +E G + ++KS G + + ++D+ +
Sbjct: 443 MLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS--TVVDMYCKC 500
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
G + EA+KL R+ + W ++L+ ++ + E
Sbjct: 501 GIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESE 535
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL + + S +D G D A + V +N + A
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++++ L+PD+++F VL L+TIELG++IH Q + + D ++ + L+ M
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + D+ VF+++ R + WN M+ GYA G A +FE
Sbjct: 598 YAKCGDMPDSLLVFEKVEKR--DFVSWNAMICGYALHGLGVEALRMFE------------ 643
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
RMQ ENV P+ +A L AC+ +G + G + H Y
Sbjct: 644 -------------------RMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY 684
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIA 284
L + ++D+ +S +A++ +M ++ + W T+++
Sbjct: 685 KLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 269/473 (56%), Gaps = 1/473 (0%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I + +G A + DV + + I A + D AV + + + + PD+
Sbjct: 181 ISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDD 240
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ VL A +L +ELG +H G+ ++V ALI MYA C AR+VFD
Sbjct: 241 VTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDA 300
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R WN ++ GY K G ++ AR+LF+ M +++I++ ++I GY Q EA+
Sbjct: 301 VG-RGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALL 359
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LF M+ +++ D +++ LSACA LGA+ G +H IE + T + + AL+DMY
Sbjct: 360 LFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM 419
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G++ +A VF+ M + V WT MIAGLA +G+G+ L+ F +M +PN +++IA
Sbjct: 420 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 479
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L+AC H L+ GR YF+ M+ Y I P+IE YGCMIDLLGR+G L EA L++ MP +
Sbjct: 480 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQ 539
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
N+ IW S+L+A ++ ++L +CA +HL+K+EP Y L NI +W ++ KIR
Sbjct: 540 PNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIR 599
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+M + VKK G S + V+ +VH+FV D SHP + +L +I+ ++K A
Sbjct: 600 MLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSA 652
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 211/420 (50%), Gaps = 46/420 (10%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKAL----CQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
YA +F + +L++T ++A + +P +L+ +++ +A+RPD ++F F+
Sbjct: 55 YALHLFD-RMPASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLF 113
Query: 84 K-AVVKLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIYDARKVFDELSLRV 141
K + L +H + T L S VA +LI MY D R+ FDE+ ++
Sbjct: 114 KCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVK- 172
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ W +++G AK+G L++AR L ++VISWT+LIA Y++ D+ EA+ F+ M
Sbjct: 173 -DAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNM 231
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E + PD++ ++ LSAC+QL +ELG +H+ +++ G++ L ALIDMYAK G
Sbjct: 232 LSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDF 291
Query: 262 GKALQV--------------------------------FENMKNKSVITWTTMIAGLALH 289
G A +V F+ M+ + +IT+ +MI G
Sbjct: 292 GHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHS 351
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G REAL +F M R ++ + T +++LSAC +G + GR ++ R +E I
Sbjct: 352 GQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRL-VETDIYI 410
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
++D+ + G + EA + +RM + + W +++A G +G+ L++ ++
Sbjct: 411 GTALLDMYMKCGRVNEATIVFQRMG-KRDVHAWTAMIAGLAFNG---MGKAGLEYFYQMR 466
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 201/456 (44%), Gaps = 37/456 (8%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
+ N L + +D S++G S DV +N+ + + AV
Sbjct: 927 IPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLK 986
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLD-SDVHVVAALIQMYASC 124
++ P SF +L K +LG +IH G S VHV LI MY C
Sbjct: 987 QMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKC 1046
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
C +++ A+F + + +LI
Sbjct: 1047 CC---------------------------------FDHSLAIFNEIPSIALECCNSLITS 1073
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG--EWIHNYIEQYGLN 242
+ + + A+ + M VE V PD++ A + A + + L + +H+ + + G
Sbjct: 1074 SLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFE 1133
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + ++LI YA +G++ + +FE + + +VI +T +I+ A +G G A+++F +M
Sbjct: 1134 MDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQM 1193
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ +KP+ +TF+ ++ C G+ E GR +M++ ++P + CM++LL R G+
Sbjct: 1194 VSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGF 1253
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
++EA +++ + P W SLL + +G+ LG+ A LI + + +SN
Sbjct: 1254 VKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNF 1313
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
+ +G + +I+++ VKK G S IEVS R
Sbjct: 1314 FNDIGDRETALRIKEMTNVKEVKK-SGHSLIEVSHR 1348
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
DV N I + A +Y + AS +R ++F +L ++L H
Sbjct: 761 DVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL----H 816
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ + GL + V +AL+ Y + + + +F EL L+ N A+ N ++ G +G+
Sbjct: 817 GRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQ--NTAMCNVVLRG---LGN 871
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L +TE E I F M+ + ++ + ++ A+
Sbjct: 872 LK--------LTE--------------------ELICCFLDMRRQYLELNGLSYCYAMKG 903
Query: 220 CAQLGA-VELGEWIHNYIEQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
C Q G +E G +H + + G + + + L+N+L+D+Y+ G ++ ++ ++ VI
Sbjct: 904 CYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVI 963
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+W ++++ A G +EA+ +M P+ +F+++L+ G +LG + I+
Sbjct: 964 SWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIV 1023
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+ +ID+ G+ + + +P
Sbjct: 1024 HKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIP 1060
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + + S I + + G ++ IF P+V + I A + + A+ L+
Sbjct: 1131 GFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELF 1190
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGR-EIHCQTVGTGLDSDVHVVAALIQMYAS 123
+++ +S L+PDN +F + + E GR I LD D A ++ + +
Sbjct: 1191 DQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSR 1250
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ +A ++ ++ LR + A W++++ G+
Sbjct: 1251 DGFVKEAMEMMEQSPLRHYTKA-WSSLLQSCKAHGE 1285
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 261/461 (56%), Gaps = 33/461 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY IF + D +N I AL Q + + ++ +N++ ++PD++++ VLKA
Sbjct: 405 AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 464
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++E G +H + + +GL SD V + ++ MY CKC
Sbjct: 465 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY--CKC---------------------- 500
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G ++ A+ L + + + V+SW +++G++ + EA F M +KP
Sbjct: 501 ---------GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 551
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D L CA L +ELG+ IH I + + +++ L+DMYAK G + +L VF
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 611
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL +
Sbjct: 612 EKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFD 671
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 672 DGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSI 731
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK P
Sbjct: 732 CKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEP 791
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
GCS+IEV +H F+ GD +HP LY++L + G+MK +
Sbjct: 792 GCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 832
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 162/360 (45%), Gaps = 35/360 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F PDV +N + CQ +V L+ ++ + PD +F +LK+
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + LG ++H V TGL+ DV +AL+ MY C+
Sbjct: 162 LEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCR----------------------- 198
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
L++A F M E+N +SW IAG Q +Q + LF MQ +
Sbjct: 199 ----------SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 248
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + +A +CA + + G +H + + ++ + A++D+YAK+ + A + F
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF 308
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ N +V T M+ GL GLG EA+ +F M R+ ++ + ++ + SAC
Sbjct: 309 FGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYF 368
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G++ + + + G + I ++DL G+ L EA + + M + ++ W +++AA
Sbjct: 369 QGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 149/315 (47%), Gaps = 17/315 (5%)
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHC-------QTVGTGLDSDVHVVAALIQM 120
Q + P +F V + S + GRE + V +G + V L+QM
Sbjct: 7 QPPPVAPARVTFSRVFQ-----SCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQM 61
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C AR+VFD + R + WNTM+ Y+ GD++ A ALF+ M + +V+SW
Sbjct: 62 YARCAGAACARRVFDAMPRR--DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 119
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
L++GY Q E++ LF M V PD L +C+ L + LG +H + G
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L V +AL+DMY K + AL F M ++ ++W IAG + L++F
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFI 239
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+R + ++ ++ + +C + + GR+ + + +K+++ + + ++D+ +
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGT--AIVDVYAK 297
Query: 360 AGYLQEAEKLLRRMP 374
A L +A + +P
Sbjct: 298 ANSLTDARRAFFGLP 312
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 171/373 (45%), Gaps = 48/373 (12%)
Query: 45 NTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
N + L + + A+ L+ + S++R D S V A + G+++HC +
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
+G D D+ V A++ +Y CK + +A +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLI------------------------------- 408
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
F+ M +K+ +SW +IA Q ++ I F M +KPD+ + L ACA L
Sbjct: 409 --FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALR 466
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
++E G +H+ + + GL + + + ++DMY K G I +A ++ + + + V++W +++
Sbjct: 467 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 526
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGI 343
G +L+ EA FS M +KP+ TF +L C ++ +ELG++ + I+K
Sbjct: 527 GFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD 586
Query: 344 EPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ I ++D+ + G + ++ EK+ +R + W +++ ++G LG
Sbjct: 587 DEYISS--TLVDMYAKCGDMPDSLLVFEKVEKR-----DFVSWNAMICGYALHG---LGV 636
Query: 400 CALQHLIKLEPHN 412
AL+ +++ N
Sbjct: 637 EALRMFERMQKEN 649
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 171/396 (43%), Gaps = 43/396 (10%)
Query: 5 GLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL+ + S +D C SL D A F + + + I Q + + +
Sbjct: 179 GLEIDVRTGSALVDMYGKCRSL---DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++Q L S+ ++ +S + GR++H + SD V A++ +Y
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A K L +AR F + V + +
Sbjct: 296 A---------------------------------KANSLTDARRAFFGLPNHTVETSNAM 322
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ G + EA+ LF+ M +++ D +++ SACA+ G+ +H + G
Sbjct: 323 MVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF 382
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + +NNA++D+Y K + +A +F+ MK K ++W +IA L +G + + F+
Sbjct: 383 DVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNE 442
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRA 360
M R +KP++ T+ ++L AC + +E G + ++KS G + + ++D+ +
Sbjct: 443 MLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS--TVVDMYCKC 500
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
G + EA+KL R+ + W ++L+ ++ + E
Sbjct: 501 GIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESE 535
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL + + S +D G D A + V +N + A
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++++ L+PD+++F VL L+TIELG++IH Q + + D ++ + L+ M
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + D+ VF+++ R + WN M+ GYA G A +FE
Sbjct: 598 YAKCGDMPDSLLVFEKVEKR--DFVSWNAMICGYALHGLGVEALRMFE------------ 643
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
RMQ ENV P+ +A L AC+ +G + G + H Y
Sbjct: 644 -------------------RMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY 684
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIA 284
L + ++D+ +S +A++ +M ++ + W T+++
Sbjct: 685 KLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 276/476 (57%), Gaps = 18/476 (3%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
Y ++F + + N ++ L +PL + L+++ + R + +SF F+L ++
Sbjct: 97 YPLALFRRANSTSAFASNNLLRVL---PHPL-PLTLFSRFR----RRNPHSFTFLLASIS 148
Query: 88 KLSTIE---------LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
LG +H V G D+ V AL+ Y + R+VFDEL
Sbjct: 149 NHLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELP 208
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
RV +V WN ++AGY + G + AR +F+ M ++ ISW+TL+ GY + ++ A+ +F
Sbjct: 209 -RVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVF 267
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
R M + V+P++ A++ ALSA A+LG +E G+++HN +++ G+ + + AL+DMYAK
Sbjct: 268 RNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKC 327
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G + A +VF+ M+ + V W MI GLA HGLGR+A+++F R + P +TF+ +L
Sbjct: 328 GCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVL 387
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+ C GLV GRRYF ++ +Y IEP++E YGCM+DLLGRAG + EA +L+ M +
Sbjct: 388 NGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPD 447
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+WG++L++ +G V+LG LI+L+P +SG Y +LS IYA +W+E ++RK+
Sbjct: 448 PVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKL 507
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M G K G S +E +VH+F+ GDT H D ++Y L IN ++ A ++ +
Sbjct: 508 MSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 39/291 (13%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
VR + N +L+ ++ + G A +F D ++T + + + A+
Sbjct: 210 VRDVLTWNEVLAGYVRA----GMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALG 265
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ + +RP+ + L A +L +E G+ +H +G+ ++V AAL+ MYA
Sbjct: 266 VFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYA 325
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C C+ AR+VFD + R +V WN M+ G A G
Sbjct: 326 KCGCVAVAREVFDGMRRR--DVFAWNAMICGLAAHG------------------------ 359
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGL 241
+A+ LF R E + P + + L+ C++ G V G + +E+Y +
Sbjct: 360 -------LGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRI 412
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
+ ++D+ ++G + +A+++ E M + W T+++ HGL
Sbjct: 413 EPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGL 463
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 276/476 (57%), Gaps = 18/476 (3%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
Y ++F + + N ++ L +PL + L+++ + R + +SF F+L ++
Sbjct: 97 YPLALFRRANSTSAFASNNLLRVL---PHPL-PLTLFSRFR----RRNPHSFTFLLASIS 148
Query: 88 KLSTIE---------LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
LG +H V G D+ V AL+ Y + R+VFDEL
Sbjct: 149 NHLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELP 208
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
RV +V WN ++AGY + G + AR +F+ M ++ ISW+TL+ GY + ++ A+ +F
Sbjct: 209 -RVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVF 267
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
R M + V+P++ A++ ALSA A+LG +E G+++HN +++ G+ + + AL+DMYAK
Sbjct: 268 RNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKC 327
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G + A +VF+ M+ + V W MI GLA HGLGR+A+++F R + P +TF+ +L
Sbjct: 328 GCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVL 387
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+ C GLV GRRYF ++ +Y IEP++E YGCM+DLLGRAG + EA +L+ M +
Sbjct: 388 NGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPD 447
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+WG++L++ +G V+LG LI+L+P +SG Y +LS IYA +W+E ++RK+
Sbjct: 448 PVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKL 507
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M G K G S +E +VH+F+ GDT H D ++Y L IN ++ A ++ +
Sbjct: 508 MSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 39/291 (13%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
VR + N +L+ ++ + G A +F D ++T + + + A+
Sbjct: 210 VRDVLTWNEVLAGYVRA----GMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALG 265
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ + +RP+ + L A +L +E G+ +H +G+ ++V AAL+ MYA
Sbjct: 266 VFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYA 325
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C C+ AR+VFD + R +V WN M+ G A G
Sbjct: 326 KCGCVAVAREVFDGMRRR--DVFAWNAMICGLAAHG------------------------ 359
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGL 241
+A+ LF R E + P + + L+ C++ G V G + +E+Y +
Sbjct: 360 -------LGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRI 412
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
+ ++D+ ++G + +A+++ E M + W T+++ HGL
Sbjct: 413 EPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGL 463
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 261/461 (56%), Gaps = 33/461 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY IF + D +N I AL Q + + ++ +N++ ++PD++++ VLKA
Sbjct: 447 AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 506
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++E G +H + + +GL SD V + ++ MY CKC
Sbjct: 507 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY--CKC---------------------- 542
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G ++ A+ L + + + V+SW +++G++ + EA F M +KP
Sbjct: 543 ---------GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 593
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D L CA L +ELG+ IH I + + +++ L+DMYAK G + +L VF
Sbjct: 594 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 653
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E ++ + ++W MI G ALHGLG EAL MF RM++ V PN TF+A+L AC HVGL +
Sbjct: 654 EKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFD 713
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G RYF++M + Y +EP++E + CM+D+LGR+ QEA K + MPF+A+A IW +LL+
Sbjct: 714 DGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSI 773
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I DVE+ E A +++ L+P +S Y +LSN+YA G+W + + R++++ +KK P
Sbjct: 774 CKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEP 833
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
GCS+IEV +H F+ GD +HP LY++L + G+MK +
Sbjct: 834 GCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 874
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 162/360 (45%), Gaps = 35/360 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A ++F PDV +N + CQ +V L+ ++ + PD +F +LK+
Sbjct: 144 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 203
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + LG ++H V TGL+ DV +AL+ MY C+
Sbjct: 204 LEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCR----------------------- 240
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
L++A F M E+N +SW IAG Q +Q + LF MQ +
Sbjct: 241 ----------SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 290
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + +A +CA + + G +H + + ++ + A++D+YAK+ + A + F
Sbjct: 291 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF 350
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ N +V T M+ GL GLG EA+ +F M R+ ++ + ++ + SAC
Sbjct: 351 FGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYF 410
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G++ + + + G + I ++DL G+ L EA + + M + ++ W +++AA
Sbjct: 411 QGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 468
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 171/373 (45%), Gaps = 48/373 (12%)
Query: 45 NTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
N + L + + A+ L+ + S++R D S V A + G+++HC +
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
+G D D+ V A++ +Y CK + +A +
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLI------------------------------- 450
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
F+ M +K+ +SW +IA Q ++ I F M +KPD+ + L ACA L
Sbjct: 451 --FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALR 508
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
++E G +H+ + + GL + + + ++DMY K G I +A ++ + + + V++W +++
Sbjct: 509 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 568
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGI 343
G +L+ EA FS M +KP+ TF +L C ++ +ELG++ + I+K
Sbjct: 569 GFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD 628
Query: 344 EPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ I ++D+ + G + ++ EK+ +R + W +++ ++G LG
Sbjct: 629 DEYISS--TLVDMYAKCGDMPDSLLVFEKVEKR-----DFVSWNAMICGYALHG---LGV 678
Query: 400 CALQHLIKLEPHN 412
AL+ +++ N
Sbjct: 679 EALRMFERMQKEN 691
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 17/315 (5%)
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHC-------QTVGTGLDSDVHVVAALIQM 120
Q + P +F V + S + GRE + V +G V L+QM
Sbjct: 49 QPPPVAPARVTFSRVFQ-----SCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQM 103
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C AR+VFD + R + WNTM+ Y+ GD++ A ALF+ M + +V+SW
Sbjct: 104 YARCAGAACARRVFDAMPRR--DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 161
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
L++GY Q E++ LF M V PD L +C+ L + LG +H + G
Sbjct: 162 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 221
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L V +AL+DMY K + AL F M ++ ++W IAG + L++F
Sbjct: 222 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFI 281
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+R + ++ ++ + +C + + GR+ + + +K+++ + + ++D+ +
Sbjct: 282 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGT--AIVDVYAK 339
Query: 360 AGYLQEAEKLLRRMP 374
A L +A + +P
Sbjct: 340 ANSLTDARRAFFGLP 354
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 171/396 (43%), Gaps = 43/396 (10%)
Query: 5 GLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL+ + S +D C SL D A F + + + I Q + + +
Sbjct: 221 GLEIDVRTGSALVDMYGKCRSL---DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 277
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++Q L S+ ++ +S + GR++H + SD V A++ +Y
Sbjct: 278 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 337
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A K L +AR F + V + +
Sbjct: 338 A---------------------------------KANSLTDARRAFFGLPNHTVETSNAM 364
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ G + EA+ LF+ M +++ D +++ SACA+ G+ +H + G
Sbjct: 365 MVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF 424
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + +NNA++D+Y K + +A +F+ MK K ++W +IA L +G + + F+
Sbjct: 425 DVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNE 484
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRA 360
M R +KP++ T+ ++L AC + +E G + ++KS G + + ++D+ +
Sbjct: 485 MLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS--TVVDMYCKC 542
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
G + EA+KL R+ + W ++L+ ++ + E
Sbjct: 543 GIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESE 577
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL + + S +D G D A + V +N + A
Sbjct: 520 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 579
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++++ L+PD+++F VL L+TIELG++IH Q + + D ++ + L+ M
Sbjct: 580 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 639
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + D+ VF+++ R + WN M+ GYA G A +FE
Sbjct: 640 YAKCGDMPDSLLVFEKVEKR--DFVSWNAMICGYALHGLGVEALRMFE------------ 685
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
RMQ ENV P+ +A L AC+ +G + G + H Y
Sbjct: 686 -------------------RMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY 726
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIA 284
L + ++D+ +S +A++ +M ++ + W T+++
Sbjct: 727 KLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/468 (36%), Positives = 273/468 (58%), Gaps = 35/468 (7%)
Query: 40 DVYLYNTTIKALCQTDNP---LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE-LG 95
D +L NT I+A + P L A + + SA+ P+ ++FPF+LKA L +G
Sbjct: 92 DAFLVNTLIRAHAASPLPSARLRAAAFFPLMLRSAVLPNKFTFPFLLKACAALPGFPGVG 151
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
+ H + G +D +V LI MY SC G
Sbjct: 152 LQAHAAALKFGFATDQYVSNTLIHMY-SC---------------------------FGGE 183
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+GD AR +F+ M + +V++W+ +I GY + ++A+ LFR MQ V+PDE+ ++
Sbjct: 184 FLGD---ARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVTVIG 240
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L+A A LGA+EL W+ ++E+ G+ V L NALID AK G + A+ VF+ M+ ++
Sbjct: 241 VLAAAADLGALELARWVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERT 300
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V++WT++I LA+ G G+EA+ +F M+ A V+P+++ FI +L+AC H G+V+ G YF+
Sbjct: 301 VVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFD 360
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
MK YGI+PKIE YGCM+D+ GRAG ++ A + + MP + N IW +L+AA +G +
Sbjct: 361 SMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTLVAACRAHGRL 420
Query: 396 ELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
ELGE ++L+ P + NY +LSN+YA+ RW E +IR+ M G+KK+PGCS +E+
Sbjct: 421 ELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVEL 480
Query: 456 SKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
VHEF+AGD SHP + +Y ++ ++ ++K H+ +L+ D
Sbjct: 481 DGEVHEFIAGDESHPQWKEIYMMVEEMARELKHVGHISATSEVLLDLD 528
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
SC F A ++F K V ++ I + +AV L+ ++QAS +RPD +
Sbjct: 178 SCFGGEFLGDARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVT 237
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
VL A L +EL R + G+ V + ALI A C
Sbjct: 238 VIGVLAAAADLGALELARWVGRFVEREGIGKSVTLCNALIDALAKC-------------- 283
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
GD++ A A+F+ M E+ V+SWT++I A + EA+ +F
Sbjct: 284 -------------------GDVDGAVAVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVF 324
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAK 257
M+ V+PD++ + L+AC+ G V+ G + ++ +YG++ + ++DM+ +
Sbjct: 325 EAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGR 384
Query: 258 SGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
+G + +A++ M K + I W T++A HG
Sbjct: 385 AGMVERAMEFIHTMPMKPNPIIWRTLVAACRAHG 418
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 274/477 (57%), Gaps = 33/477 (6%)
Query: 15 RFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
RF+ +S F D YS +F + P V YN ++A + +PL + +Y ++ +
Sbjct: 64 RFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGV 123
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
R D S F +K+ +KL ++ G +IH + G +D ++ +++ +Y+ C +A K
Sbjct: 124 RADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACK 183
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FDE+ + +V WN +++ + +A LFE+M +
Sbjct: 184 LFDEVPQK--DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYL---------------- 225
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
+PD++ L L ACA L A+E GE IH YI+Q+G NT L N+LI
Sbjct: 226 -------------CQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLI 272
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
MY++ G++ KA +VF+ M K+V++W+ MI+GL+++G GREA++ F M++ V+P +
Sbjct: 273 SMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDH 332
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF A+LSAC H GLV+ G +F+ M+ + I P + YGC++DLLGRAG L +A +L+
Sbjct: 333 TFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMS 392
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
M +A +W +LL A I+G LGE ++HLI+L+ +G+Y +L NIY+ G W++
Sbjct: 393 MEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKV 452
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++RK+M++ G+ P C+ IE++ VH+F D SHP D++Y+ L +IN Q+K A
Sbjct: 453 TELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIA 509
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 277/476 (58%), Gaps = 18/476 (3%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
Y ++F + + N ++ L +PL + L+++ + R + +SF F+L ++
Sbjct: 97 YPLALFRRANSTSAFASNNLLRVL---PHPL-PLTLFSRFR----RRNPHSFTFLLASIS 148
Query: 88 K---------LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
+ LG +H V G D+ V AL+ Y + R+VFDEL
Sbjct: 149 NHLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELP 208
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
RV +V WN ++AGY + G + AR +F+ M ++ ISW+TL+ GY + ++ A+ +F
Sbjct: 209 -RVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVF 267
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
R M + V+P++ A++ ALSA A+LG +E G+++HN +++ G+ + + AL+DMYAK
Sbjct: 268 RNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKC 327
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G + A +VF+ M+ + V W MI GLA HGLGR+A+++F R + P +TF+ +L
Sbjct: 328 GCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVL 387
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+ C GLV GRRYF ++ +Y IEP++E YGCM+DLLGRAG + EA +L+ M +
Sbjct: 388 NGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPD 447
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+WG++L++ +G V+LG LI+L+P +SG Y +LS IYA +W+E ++RK+
Sbjct: 448 PVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKL 507
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M G K G S +E +VH+F+ GDT H D ++Y L IN ++ A ++ +
Sbjct: 508 MSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 39/291 (13%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
VR + N +L+ ++ + G A +F D ++T + + + A+
Sbjct: 210 VRDVLTWNEVLAGYVRA----GMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALG 265
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ + +RP+ + L A +L +E G+ +H +G+ ++V AAL+ MYA
Sbjct: 266 VFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYA 325
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
C C+ AR+VFD + R +V WN M+ G A G
Sbjct: 326 KCGCVAVAREVFDGMRRR--DVFAWNAMICGLAAHG------------------------ 359
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGL 241
+A+ LF R E + P + + L+ C++ G V G + +E+Y +
Sbjct: 360 -------LGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRI 412
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
+ ++D+ ++G + +A+++ E M + W T+++ HGL
Sbjct: 413 EPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGL 463
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 286/495 (57%), Gaps = 13/495 (2%)
Query: 1 MIVRGLDQNNHL---LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+I RG D + +L L F C L + A +F P+ L+N I Q++
Sbjct: 549 LIKRGFDLDVYLRCALMNFYGRCWGL---EKANQVFHEMPNPEALLWNEAIILNLQSEKL 605
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVV-KLSTIELGREIHCQTVGTGLDSDVHVVAA 116
V L+ K+Q S L+ + + VL+A + +L + +G+E H + G D DV+V +
Sbjct: 606 QKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTS 665
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK--- 173
LI MY + A+ VFD + R N+ WN++V+GY+ G +A L M ++
Sbjct: 666 LIDMYVKNHSLTSAQAVFDNMKNR--NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 723
Query: 174 -NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
++++W +I+GYA EA+ F +MQ E V P+ ++ L ACA L ++ G+ I
Sbjct: 724 PDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEI 783
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H + G V + ALIDMY+KS + A +VF ++NK++ +W MI G A+ GLG
Sbjct: 784 HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLG 843
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
+EA+ +F+ M++ V P+ ITF A+LSAC + GL+ G +YF+ M + Y I P++E Y C
Sbjct: 844 KEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCC 903
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLLGRAGYL EA L+ MP + +A IWG+LL + I+ +++ E A ++L KLEP+N
Sbjct: 904 MVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNN 963
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
S NY ++ N+Y+I RW + +R++M GV+ S+I++++RVH F + + HPD
Sbjct: 964 SANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDA 1023
Query: 473 DRLYQILCKINGQMK 487
++Y L ++ +MK
Sbjct: 1024 GKIYFELYQLVSEMK 1038
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 197/454 (43%), Gaps = 79/454 (17%)
Query: 21 SSLGFSDY-AYSIFTHKSKPDVYL-YNTTIKALCQTDNPLNAVI-LYNKIQASALRPDNY 77
S LGF D+ + ++ + P YL +N+ ++ + L+ V+ ++ ++ + D+
Sbjct: 465 SYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSE 524
Query: 78 SFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL 137
+ LK ++ I LG EIH + G D DV++ AL+ Y C + A +VF E+
Sbjct: 525 VYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM 584
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
N AL W I Q ++ + + L
Sbjct: 585 P-----------------------NPEALL----------WNEAIILNLQSEKLQKGVEL 611
Query: 198 FRRMQVENVKPDEIAMLAALSAC-AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
FR+MQ +K + ++ L A ++LG + +G+ H Y+ + G + V + +LIDMY
Sbjct: 612 FRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 671
Query: 257 KSGKIGKALQVFENMKNKSV-----------------------------------ITWTT 281
K+ + A VF+NMKN+++ +TW
Sbjct: 672 KNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNG 731
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
MI+G A+ G G+EAL F++M++ V PN + +L AC + L++ G+ + + R
Sbjct: 732 MISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKE-IHCLSIRN 790
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 401
G + +ID+ ++ L+ A K+ RR+ A W ++ I+G LG+ A
Sbjct: 791 GFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ-NKTLASWNCMIMGFAIFG---LGKEA 846
Query: 402 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ +++ G AI A+L SG I
Sbjct: 847 ISVFNEMQKVGVGPDAI--TFTALLSACKNSGLI 878
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 10/272 (3%)
Query: 142 WNV-AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY-AQMDQPNEAITLFR 199
WN A +++ Y GD +A +F + +N + W + + + + + + +F+
Sbjct: 453 WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFK 512
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+ + V D AL C ++ + LG IH + + G + V L AL++ Y +
Sbjct: 513 ELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW 572
Query: 260 KIGKALQVFENMKNKSVITWT-TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
+ KA QVF M N + W +I L L ++ +++F +M+ + +K T + +L
Sbjct: 573 GLEKANQVFHEMPNPEALLWNEAIILNLQSEKL-QKGVELFRKMQFSFLKAETATIVRVL 631
Query: 319 SAC-CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
A +G + +G+ + R G + + +ID+ + L A+ + M
Sbjct: 632 QASISELGFLNMGKETHGYV-LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK-NR 689
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
N W SL++ + G + E AL+ L ++E
Sbjct: 690 NIFAWNSLVSGYSFKG---MFEDALRLLNQME 718
>gi|326530063|dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 263/424 (62%), Gaps = 10/424 (2%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL-DSDVHVVAALIQMYASCKCIYDARK 132
P + +FPF+ +A +L++ L +H + GL D++V +L+ MYA+C AR+
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHAHPLRLGLLPWDLYVANSLVHMYAACALPDLARR 117
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FDE+ N+ WN ++ GYAK DL +AR +F M +++V+SW+ +I G + +
Sbjct: 118 LFDEIPRP--NLVSWNALLDGYAKCRDLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHR 175
Query: 193 EAITLFRRMQV----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
EA+ LF M+ V+ +++ M++ L ACA LG + G +H Y++++G + L
Sbjct: 176 EALALFEMMEAAGAGNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLA 235
Query: 249 NALIDMYAKSGKIGKALQVFE--NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+L+DMYAK G I +AL+VF + V+ W +I GLA+HGL E++++F M+ +
Sbjct: 236 TSLVDMYAKCGAISEALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSG 295
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V P+EIT++ +LSAC H GLV R F ++ + G+ P +E Y C++D+LGRAG+L+EA
Sbjct: 296 VVPDEITYLVLLSACVHGGLVGEAWRLFRSLEVQ-GLRPHVEHYACLVDVLGRAGHLEEA 354
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+++ MP E N ++ G+LL A +++G VELGE + L++L+P + G Y LSNIYAI
Sbjct: 355 YGVVKSMPMEPNVSVLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIA 414
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW E+ K RKVM + GVKK+PG S I+V R+H F+A D +H +Y +L I +M
Sbjct: 415 RRWQEAKKARKVMEERGVKKIPGFSEIDVGGRLHRFIAHDKAHSGSREIYALLNLITVEM 474
Query: 487 KFAE 490
K +
Sbjct: 475 KMKD 478
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 252/408 (61%), Gaps = 33/408 (8%)
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
LRPD + ++ A +L +E G+ +H + GLD ++ V A++ MY
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYC--------- 57
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
K D+ +A+ +F + EK+V+SWT++++G A+
Sbjct: 58 ------------------------KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYF 93
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
E++ LFR+MQ+ ++PDEI ++ LSACAQ GA++ G++IH I+++ +N + L AL
Sbjct: 94 QESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETAL 153
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
+DMYAK G I ALQVF M+ ++V TW MI GLA+HG G +A+ +F +ME ++ P++
Sbjct: 154 VDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDD 213
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TFIA+L AC H GLV+ G F MK+++ IEP++E YGC++DLL RA + +A +
Sbjct: 214 VTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIE 273
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP +AN+ +W +LL A G +L E + +I+LEP + G Y +LSN+YA + +W+
Sbjct: 274 NMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDH 333
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ K+RK M++ G++K PGCS+IE++ +H+FVAGD SH +++Y ++
Sbjct: 334 ALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMI 381
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 123/195 (63%), Gaps = 2/195 (1%)
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
+++N++PDE+ M++ + ACAQLG +E G+ +H+Y ++ GL+ + +NNA++DMY K I
Sbjct: 3 KLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDI 62
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A +VF ++ K V++WT+M++GLA G +E+L +F +M+ +++P+EIT + +LSAC
Sbjct: 63 ESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSAC 122
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
G ++ G +Y +++ ++ I + ++D+ + G + A ++ RRM N
Sbjct: 123 AQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFT 180
Query: 382 WGSLLAASNIYGDVE 396
W +++ ++G E
Sbjct: 181 WNAMIGGLAMHGHGE 195
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD+N + + +D + A +F + DV + + + L ++ ++ L+
Sbjct: 41 GLDENLSVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALF 100
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+Q + PD + VL A + ++ G+ IH ++ D+ + AL+ MYA C
Sbjct: 101 RKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKC 160
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I A +VF +RV NV WN M+ G A G
Sbjct: 161 GSIDLALQVFRR--MRVRNVFTWNAMIGGLAMHG-------------------------- 192
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNT 243
+AI+LF +M+ + + PD++ +A L AC+ G V+ G + ++ ++ +
Sbjct: 193 -----HGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEP 247
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAG 285
+ ++D+ ++ K+ AL ENM K+ + W T++
Sbjct: 248 RMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGA 290
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 284/544 (52%), Gaps = 69/544 (12%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q+ ++ + I S S A ++F P+V+LYN I+A + N N++ +
Sbjct: 50 LHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFG 109
Query: 66 ---KIQASALRPDNYSFPFVLKAVVKLST-IELGREIHCQTVGTGLDSDVHVVAALIQMY 121
K+ + DN+++PF+LK S+ + L + +H G D+ V +LI Y
Sbjct: 110 VLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCY 169
Query: 122 ASCKC---------------------------------IYDARKVFDELSLR---VWN-- 143
C+C + A KVFDE+ R WN
Sbjct: 170 --CRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTM 227
Query: 144 ------------------------VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+ W+TMV GY+K GD++ AR LF+ KN++ WT
Sbjct: 228 LDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWT 287
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
T+I+GYA+ Q EA+ L M+ ++ D+ ++ L+ACA+ G + LG+ +H+ +
Sbjct: 288 TIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRS 347
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDM 298
+ N+ IDMYAK G + A +VF MK K +++W +MI G +HG G +++++
Sbjct: 348 RFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIEL 407
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F+ M R KP+ TFI +L AC H GLV GR YF M+ YGI P+IE YGCM+DLLG
Sbjct: 408 FNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLG 467
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G+L+EA L+R MPFE NA I G+LL A ++ DV+L ++L KL P + GN+++
Sbjct: 468 RGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFSL 527
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNIYA G W K+RK M D G +K G S IEV + VHEF D SHP +Y +
Sbjct: 528 LSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNM 587
Query: 479 LCKI 482
+ ++
Sbjct: 588 IDRL 591
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 43/303 (14%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
++IH Q + L D ++ LI Y+ + A VF+++ NV ++N ++ Y+
Sbjct: 39 KQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDP--NVHLYNYLIRAYS 96
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
G+ +N+ F ++ +M V+ V D
Sbjct: 97 LSGNESNSLCAFGVLL----------------------------KMHVDGVLADNFTYPF 128
Query: 216 ALSAC-AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
L C + L + +H ++E+ G + + N+LID Y + G + A++VF M+ +
Sbjct: 129 LLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEER 188
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRY 333
V++W +M+ GL +G AL +F M ER RV N +L G ++ +
Sbjct: 189 DVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWN-----TMLDGFTKAGEMDKAFKL 243
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
F M R I + M+ + G + A L R P + N +W ++++ G
Sbjct: 244 FERMAER-----DIVSWSTMVCGYSKNGDMDMARMLFDRCPVK-NLVLWTTIISGYAEKG 297
Query: 394 DVE 396
V+
Sbjct: 298 QVK 300
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 257/473 (54%), Gaps = 40/473 (8%)
Query: 28 YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLN-----AVILYNKIQASALRPDNYSFPF 81
YA +F P D YNT ++ ++ NP + AV ++ ++ + PD Y+F
Sbjct: 79 YARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVS 138
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+LKA E GR+ H V G +V LI MYA C
Sbjct: 139 LLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAEC----------------- 181
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
GD AR +F V+S+ +IA + +P EA+ LFR M
Sbjct: 182 ----------------GDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREM 225
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
Q + +KP + +++ LSACA LGA+ELG W+H+Y+ + GL ++V ++ ALIDMYAK G +
Sbjct: 226 QGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSL 285
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A+ VF+ M++K W+ MI A HG GREA+ +F M++ +KP++ITF+ +L AC
Sbjct: 286 EDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYAC 345
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV G +YF+ MK +GI P I+ YGC+ DLL R+G L+ A K + +P +
Sbjct: 346 SHSGLVSEGLQYFDDMKD-HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPIL 404
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W +LL+A +GD ELG+ + ++KL+ + G+Y I SN+ A G W E +RK+M +
Sbjct: 405 WRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSE 464
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
GV K+PGCS IE+ VHEF AGD HP +++ ++ Q+K ++ N
Sbjct: 465 KGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPN 517
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 37/303 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G ++++ I+ + G + A +F V YN I A ++ P A++L+
Sbjct: 163 GAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLF 222
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L+P + + VL A L +ELGR +H GL S V V ALI MYA C
Sbjct: 223 REMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKC 282
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA VF + + + W+ M+ YA G
Sbjct: 283 GSLEDAIDVFQGMESK--DRQAWSVMIVAYAN--------------------------HG 314
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + EAI+LF M+ E +KPD+I L L AC+ G V G + ++ +G+
Sbjct: 315 YGR-----EAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIVPG 369
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFS 300
+ + D+ A+SG++ +A + + + N + I W T+++ HG LG+ +
Sbjct: 370 IKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERIL 429
Query: 301 RME 303
+++
Sbjct: 430 KLD 432
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 262/482 (54%), Gaps = 36/482 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL + +L+ I+ SS + A S+ K D +NT I P A+
Sbjct: 123 GLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQ 182
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++++ + D+ + L A + +++G+ H V G + + ++ ++LI MYA
Sbjct: 183 AFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYA 242
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
K G + +AR +F+ M ++N + WT++I
Sbjct: 243 ---------------------------------KCGQVEDARRIFDGMPDRNAVCWTSMI 269
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+GY Q+ Q EAI LFR MQ+ VK D+ + +S+C Q+GA++LG ++H Y + +GL
Sbjct: 270 SGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLG 329
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + N+LIDMY+K G I KA +F M + +WT +I G A +GL EALD+F++M
Sbjct: 330 KDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQM 389
Query: 303 ER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
E V PNEITF+ +L++C H GLVE G R+F+ M S YGI P+IE YGCM+DLLGRA
Sbjct: 390 EEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAK 449
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L EAE+ ++ MP +A +W SLL A G+V L E + + LEP+ G +LS
Sbjct: 450 LLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLST 509
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+YA RW ++ K+R + K PGCS+IEV VHEF AGD SH + + +Y L
Sbjct: 510 VYATTSRWVDANKVRTGIYSGRKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTLLG 569
Query: 482 IN 483
IN
Sbjct: 570 IN 571
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 45/357 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G + N ++ S I + G + A IF + + + I Q A
Sbjct: 222 LVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEA 281
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +Q + ++ D+ + V+ + ++ ++LGR +H GL D+ V +LI M
Sbjct: 282 IKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDM 341
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C GD+ A +F M +++ SWT
Sbjct: 342 YSKC---------------------------------GDIKKAYDIFCGMVKRDNFSWTV 368
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQ 238
+I G+A EA+ LF +M+ E V P+EI L L++C+ G VE G H
Sbjct: 369 IIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSI 428
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALD 297
YG+ + ++D+ ++ + +A Q + M + W +++ A G L
Sbjct: 429 YGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL--FACRTCGEVGLA 486
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP--KIEQYGC 352
+ ++PN+ +LS + R+ + K R GI K +Q GC
Sbjct: 487 EYVAERIQVLEPNKCGGDVLLST-----VYATTSRWVDANKVRTGIYSGRKTKQPGC 538
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 257/475 (54%), Gaps = 34/475 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL + + S FI G D A +F S V +N I Q A+ L+
Sbjct: 554 GLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLF 613
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q PD +F +L A V +E +E+H GL
Sbjct: 614 LQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL----------------- 656
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ LRV N +V Y+K G++ A+ +F+ M E+NV +WT +I G
Sbjct: 657 ------------VDLRVGN-----ALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGG 699
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
AQ ++A + F +M E + PD ++ LSACA GA+E + +HN+ GL +
Sbjct: 700 LAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSD 759
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + NAL+ MYAK G I A VF++M + V +WT MI GLA HG G EALD F +M+
Sbjct: 760 LRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKS 819
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
KPN +++A+L+AC H GLV+ GRR F M YGIEP +E Y CM+DLLGRAG L+
Sbjct: 820 EGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLE 879
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE + MP E + A WG+LL A YG++E+ E A + +KL+P ++ Y +LSNIYA
Sbjct: 880 EAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYA 939
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
G+W + +R +M+ G++K PG S+IEV R+H FV GDTSHP+ +Y L
Sbjct: 940 ATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQL 994
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 163/320 (50%), Gaps = 33/320 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G++QN ++ ++ + G A +F K ++Y++ T I + + +A
Sbjct: 144 IIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDA 203
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ +Y+K++ +P+ ++ +LKA ++ G++IH + +G SDV V AL+ M
Sbjct: 204 MRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNM 263
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C G + +A+ +F+ M E+NVISWT
Sbjct: 264 YVKC---------------------------------GSIEDAQLIFDKMVERNVISWTV 290
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I G A + EA LF +MQ E P+ ++ L+A A GA+E + +H++ G
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L + + NAL+ MYAKSG I A VF+ M + + +WT MI GLA HG G+EA +F
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFL 410
Query: 301 RMERARVKPNEITFIAILSA 320
+M+R PN T+++IL+A
Sbjct: 411 QMQRNGCLPNLTTYLSILNA 430
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 174/386 (45%), Gaps = 39/386 (10%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F DV +N + L Q A ++ ++Q L PD+ ++ +L
Sbjct: 472 GSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+E E+H V TGL SD V +A I MY C I DAR +FD+LS+R +
Sbjct: 532 NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVR--H 589
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V WN M I G AQ EA++LF +MQ
Sbjct: 590 VTTWNAM-------------------------------IGGAAQQRCGREALSLFLQMQR 618
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E PD + LSA A+E + +H++ GL + + NAL+ Y+K G +
Sbjct: 619 EGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDL-RVGNALVHTYSKCGNVKY 677
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A QVF++M ++V TWT MI GLA HG G +A F +M R + P+ T+++ILSAC
Sbjct: 678 AKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAS 737
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G +E + N S G+ + ++ + + G + +A + M E + W
Sbjct: 738 TGALEWVKEVHNHAVSA-GLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWT 795
Query: 384 SLLAASNIYGDVELGECALQHLIKLE 409
++ +G G AL +K++
Sbjct: 796 VMIGGLAQHGR---GLEALDFFVKMK 818
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
IF + +V + I L A L+ ++Q P++Y++ +L A
Sbjct: 276 IFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGA 335
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+E +E+H V GL D+ V AL+ MYA
Sbjct: 336 LEWVKEVHSHAVNAGLALDLRVGNALVHMYA----------------------------- 366
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
K G +++AR +F+ MTE+++ SWT +I G AQ + EA +LF +MQ P+
Sbjct: 367 ----KSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLT 422
Query: 212 AMLAAL--SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
L+ L SA A A+E + +H + E+ G + + + NALI MYAK G I A VF+
Sbjct: 423 TYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFD 482
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
M ++ VI+W M+ GLA +G G EA +F +M++ + P+ T++++L+
Sbjct: 483 GMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN 532
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 156/300 (52%), Gaps = 40/300 (13%)
Query: 35 HKSKPDVYL-YNTTIK-ALCQTDNPLNA----VILYNKIQASALRPDNYSFPFVLKAVVK 88
HK P V + N ++ A QT N + A +L ++Q + D++S+ +L+ +K
Sbjct: 72 HKYLPSVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQ-QGIAIDSFSYVNILQRCLK 130
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
I L +++H + +G++ +++V L+++Y C + AR+VFD+L + N+ +W
Sbjct: 131 QEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKK--NIYIWT 188
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ GYA+ G +A+ ++ +M+ E +P
Sbjct: 189 TMIGGYAEYG-------------------------------HAEDAMRVYDKMRQECGQP 217
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+EI L+ L AC ++ G+ IH +I Q G + V + AL++MY K G I A +F
Sbjct: 218 NEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M ++VI+WT MI GLA +G G+EA +F +M+R PN T+++IL+A G +E
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 138/299 (46%), Gaps = 35/299 (11%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F ++ D++ + I L Q A L+ ++Q + P+ ++ +L
Sbjct: 369 GSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSIL 428
Query: 84 --KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
A+ S +E + +H G SD+ + ALI MYA
Sbjct: 429 NASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYA------------------- 469
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
K G +++AR +F+ M +++VISW ++ G AQ +EA T+F +M
Sbjct: 470 --------------KCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQM 515
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
Q E + PD L+ L+ A+E +H + + GL + + +A I MY + G I
Sbjct: 516 QQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSI 575
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
A +F+ + + V TW MI G A GREAL +F +M+R P+ TFI ILSA
Sbjct: 576 DDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA 634
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
+A+ + + + + D + + L C + + L + +H I + G+ + + N L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
+Y + G++ A QVF+ + K++ WTTMI G A +G +A+ ++ +M + +PNEI
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220
Query: 313 TFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
T+++IL ACC ++ G++ + +I++S + + ++E ++++ + G +++A+ +
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVET--ALVNMYVKCGSIEDAQLIFD 278
Query: 372 RMPFEANAAIWGSLLAASNIYG 393
+M E N W ++ YG
Sbjct: 279 KM-VERNVISWTVMIGGLAHYG 299
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 258/447 (57%), Gaps = 1/447 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A + + +V + + I + P +AV +N + + + PD + L
Sbjct: 183 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGAL 242
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A KL +E GR +H + +V LI MYA C I A+ VFD + R
Sbjct: 243 SACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVG-RGQK 301
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN ++ GY K+G ++ AR+LF+ M ++VI++ ++I GY + +A+ LF +++
Sbjct: 302 PEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRR 361
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
++ D +++ L+ACA LGA+ G +H IEQ + V L AL+DMY K G++ +
Sbjct: 362 HGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDE 421
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF M + V TW+ MIAGLA +G+G +AL+ F +M+R +P +T+IA+L+AC H
Sbjct: 422 ATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSH 481
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
L+ GR++FN M+S + + P+IE YGCMIDLL R+G L EA L++ MP + NA IW
Sbjct: 482 SSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWA 541
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
S+L+A ++ +++L A +HL+KL P Y L NIY +W E+ +IR +M + G
Sbjct: 542 SILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQG 601
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHP 470
VKK G S I V+ +VH+FV D SHP
Sbjct: 602 VKKTAGYSSITVAGQVHKFVVNDQSHP 628
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 205/415 (49%), Gaps = 44/415 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQT----DNPLNAVILYN 65
HLL+ + S+ Y S+F P +L++T ++A Q D+P V++
Sbjct: 35 EHLLNSLTNCLSAPRHLRYVLSLFDRLPHPTTFLHDTALRACLQASAGADHP---VLILR 91
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASC 124
+++ +R ++F FV + + L R +H + T L S +VA LI MYAS
Sbjct: 92 RMRRGGVRMSAFTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASL 151
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
DAR+ FDE+ ++ + VW T++ G + G L+ AR L E+NV+SWT+LIAG
Sbjct: 152 GLTDDARRAFDEVPVK--DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAG 209
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y++ +P +A+ F M + V+PDE+A++ ALSAC++L +E G +H + + +
Sbjct: 210 YSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMT 269
Query: 245 VPLNNALIDMYAKSGKIGKALQV--------------------------------FENMK 272
L LIDMYAK G I +A V F+ M
Sbjct: 270 DKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMG 329
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+ VIT+ +MI G G R+AL +F ++ R ++ + T +++L+AC +G + GR
Sbjct: 330 ARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRA 389
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
++ R +E + ++D+ + G + EA + RM E + W +++A
Sbjct: 390 LHASIEQRI-VEEDVYLVTALVDMYMKCGRVDEATAVFHRMG-ERDVHTWSAMIA 442
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 53/285 (18%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID LG D A S+F DV +N+ I + +A+ L+ +++ +R D
Sbjct: 308 IIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRAD 367
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
N++ +L A L + GR +H ++ DV++V AL+ MY C + +A VF
Sbjct: 368 NFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFH 427
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ R +V W+ M+AG A G MD A+
Sbjct: 428 RMGER--DVHTWSAMIAGLAFNG---------------------------MGMD----AL 454
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW----------IHNYIEQYGLNTIV 245
F +M+ + +P + +A L+AC+ + G +H IE YG
Sbjct: 455 ESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYG----- 509
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ID+ A+SG + +A+ + + M + + W ++++ +H
Sbjct: 510 ----CMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVH 550
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 258/459 (56%), Gaps = 33/459 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F DV +NT I L + A +++++ + PD ++ +L A +
Sbjct: 300 AREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACAR 359
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ G+EIH + V GL SDV ALI MY+
Sbjct: 360 PGGLACGKEIHARAVKDGLVSDVRFGNALINMYS-------------------------- 393
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
K G + +AR +F+ M +++V+SWT L+ GYA Q E+ + F++M + V+
Sbjct: 394 -------KAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEA 446
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++I + L AC+ A++ G+ IH + + G+ + + NAL+ MY K G + A++V
Sbjct: 447 NKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVS 506
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E M + V+TW T+I GLA +G G EAL F M+ ++PN TF+ ++SAC LVE
Sbjct: 507 EGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVE 566
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GRR F M+ YGI P + Y CM+D+L RAG+L EAE ++ MPF+ +AA+WG+LLAA
Sbjct: 567 EGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAA 626
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
+G+VE+GE A + +KLEP N+G Y LS IYA G W + K+RK+M++ GVKK P
Sbjct: 627 CRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEP 686
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
G S+IEV+ VH FVAGD SHP + +Y L + Q+K
Sbjct: 687 GRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIK 725
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 181/391 (46%), Gaps = 35/391 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N ++++ + G + A +F S V +N I A L+
Sbjct: 74 GMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLF 133
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q L PD ++F +L A + + GRE+H + + GL ++ V ALI MYA C
Sbjct: 134 TLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKC 193
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DAR+VFD ++ R + +SWTTL
Sbjct: 194 GSVRDARRVFDAMASR---------------------------------DEVSWTTLTGA 220
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YA+ E++ + M E V+P I + LSAC L A+E G+ IH I + ++
Sbjct: 221 YAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSD 280
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V ++ AL MY K G + A +VFE + N+ VI W TMI GL G EA MF RM +
Sbjct: 281 VRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLK 340
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V P+ +T++AILSAC G + G+ + + G+ + +I++ +AG ++
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKE-IHARAVKDGLVSDVRFGNALINMYSKAGSMK 399
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+A ++ RMP + + W +L+ G V
Sbjct: 400 DARQVFDRMP-KRDVVSWTALVGGYADCGQV 429
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 180/385 (46%), Gaps = 37/385 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL N + + I + G A +F + D + T A ++ ++ Y
Sbjct: 175 GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTY 234
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ + +RP ++ VL A L+ +E G++IH Q V + SDV V AL +MY C
Sbjct: 235 HAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC 294
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G + +AR +FE + ++VI+W T+I G
Sbjct: 295 ---------------------------------GAVKDAREVFECLPNRDVIAWNTMIGG 321
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Q EA +F RM E V PD + LA LSACA+ G + G+ IH + GL +
Sbjct: 322 LVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSD 381
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V NALI+MY+K+G + A QVF+ M + V++WT ++ G A G E+ F +M +
Sbjct: 382 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ 441
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
V+ N+IT++ +L AC + ++ G+ + ++K+ GI + ++ + + G +
Sbjct: 442 QGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA--GIFADLAVANALMSMYFKCGSV 499
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAA 388
++A ++ M + W +L+
Sbjct: 500 EDAIRVSEGMSTR-DVVTWNTLIGG 523
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 172/349 (49%), Gaps = 39/349 (11%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D+Y + +L++ VK + +G+++H + G+ +V+++ L+++Y C + +AR++F
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
D+ S + +V WN M++GYA G EA
Sbjct: 103 DKFSNK--SVVSWNVMISGYAHRG-------------------------------LGQEA 129
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
LF MQ E ++PD+ ++ LSAC+ A+ G +H + + GL + NALI M
Sbjct: 130 FNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISM 189
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
YAK G + A +VF+ M ++ ++WTT+ A G +E+L + M + V+P+ IT+
Sbjct: 190 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITY 249
Query: 315 IAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ +LSAC + +E G++ + I++S + + ++ + + + G +++A ++ +
Sbjct: 250 MNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVST--ALTKMYIKCGAVKDAREVFECL 307
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 420
P + W +++ G +E ++K + P AILS
Sbjct: 308 P-NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILS 355
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 44/307 (14%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL + + I+ S G A +F K DV + + + + +
Sbjct: 377 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTF 436
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+ + + ++ VLKA ++ G+EIH + V G+ +D+ V AL+ MY C
Sbjct: 437 KKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKC 496
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA +V + +S R +V WNT++ G A+ N R L
Sbjct: 497 GSVEDAIRVSEGMSTR--DVVTWNTLIGGLAQ-----NGRGL------------------ 531
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
EA+ F M+ E ++P+ + +SAC VE G + + YG
Sbjct: 532 --------EALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYG--- 580
Query: 244 IVPLNN---ALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG---LGREAL 296
IVP ++D+ A++G +G+A V M K S W ++A HG +G +A
Sbjct: 581 IVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAA 640
Query: 297 DMFSRME 303
+ ++E
Sbjct: 641 EQCLKLE 647
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 253/456 (55%), Gaps = 3/456 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F + + I Q A+ L ++ S + P S +
Sbjct: 367 GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIF 426
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + +E G ++H V G + ALI MY C+ + AR+VF + + +
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK--D 484
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN+ +A + L+ AR F+ M ++ +SWTT+I+ YA +Q NEA+ F+ M
Sbjct: 485 IVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFC 544
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E+ P+ + L C LGA ++G+ IH + G+++ + + NALI MY K G
Sbjct: 545 EHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CAD 603
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
+ ++F+ M+ + + TW T+I G A HGLGREA+ M+ ME A V PNE+TF+ +L+AC H
Sbjct: 604 SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSH 663
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G ++F M YG+ P E Y CM+DLLGR G +Q AE+ + MP E + IW
Sbjct: 664 AGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWS 723
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A I+ + E+G+ A + L ++EP N+GNY +LSNIY+ LG W E ++RK+M+ G
Sbjct: 724 ALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQG 783
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
V K PGCS+ ++ ++H FV GD H + + L
Sbjct: 784 VIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 28/406 (6%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
LG A +F + D+ +N+ I A C P A LY+ I +R
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTG------- 99
Query: 83 LKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
A++ LGR + + V G L+ + A+I Y I AR++FD + R
Sbjct: 100 --AILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR- 156
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+V+ WN+M+ GY + +AR LFE M E+N++SWT +I+GY +++ +A +F +M
Sbjct: 157 -DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E + PD+ +ALSA LG +++ E + + G V + A++++Y++ +
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 262 -GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
A++ FE+M ++ TW+TMIA L+ G A+ ++ ER VK A+++
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSIACR-TALITG 331
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
G ++ R F + EP + + +I + G + EA++L +MPF N
Sbjct: 332 LAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTI 385
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
W ++A G E LQ L H SG LS++ +I
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQEL-----HRSGMLPSLSSLTSIF 426
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI A C I DAR +F+++ + V WN ++ GY + G +N A+ LF+ M +N
Sbjct: 327 ALITGLAQCGRIDDARILFEQIPEPI--VVSWNALITGYMQNGMVNEAKELFDKMPFRNT 384
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISW +IAGYAQ + EA+ L + + + P ++ + AC+ + A+E G +H+
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL 444
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G NALI MY K + A QVF M K +++W + +A L + L EA
Sbjct: 445 AVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504
Query: 296 LDMFSRMERARVKPNEITFIAILSACCH 323
+ F M + +++++ I+SA H
Sbjct: 505 RNTFDNM----LSRDDVSWTTIISAYAH 528
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 174/391 (44%), Gaps = 52/391 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M R + N +L+ + C SL D A ++F + ++ + I + +N A
Sbjct: 153 MPSRDVSSWNSMLTGY---CHSLQMVD-ARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ K+ L PD +F L AV L +++ + + TG + DV + A++ +
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNV 268
Query: 121 YASCKCIYD-ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
Y+ + D A K F+ + R N W+TM+A + G ++ A A++E K++ T
Sbjct: 269 YSRDTSVLDTAIKFFESMIER--NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRT 326
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI G AQ + ++A LF ++ P+ I + W
Sbjct: 327 ALITGLAQCGRIDDARILFEQI------PEPIVV----------------SW-------- 356
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
NALI Y ++G + +A ++F+ M ++ I+W MIAG A +G EAL +
Sbjct: 357 ---------NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLL 407
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC--MIDLL 357
+ R+ + P+ + +I AC ++ +E G + ++ + + + C +I +
Sbjct: 408 QELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK---VGCQFNSFACNALITMY 464
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ ++ A ++ RM + W S LAA
Sbjct: 465 GKCRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
+A I + G++G+A +VF+ M + +I W +MI+ +G+ A D++ + ++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
I +LS +G V RR F+ M R + + MI + G + A +
Sbjct: 98 TGAI----LLSGYGRLGRVLEARRVFDGMLERNTV-----AWNAMISCYVQNGDITMARR 148
Query: 369 LLRRMPFEANAAIWGSLLAA 388
L MP + + W S+L
Sbjct: 149 LFDAMP-SRDVSSWNSMLTG 167
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 253/456 (55%), Gaps = 3/456 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F + + I Q A+ L ++ S + P S +
Sbjct: 367 GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIF 426
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + +E G ++H V G + ALI MY C+ + AR+VF + + +
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK--D 484
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN+ +A + L+ AR F+ M ++ +SWTT+I+ YA +Q NEA+ F+ M
Sbjct: 485 IVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFC 544
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E+ P+ + L C LGA ++G+ IH + G+++ + + NALI MY K G
Sbjct: 545 EHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CAD 603
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
+ ++F+ M+ + + TW T+I G A HGLGREA+ M+ ME A V PNE+TF+ +L+AC H
Sbjct: 604 SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSH 663
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G ++F M YG+ P E Y CM+DLLGR G +Q AE+ + MP E + IW
Sbjct: 664 AGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWS 723
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A I+ + E+G+ A + L ++EP N+GNY +LSNIY+ LG W E ++RK+M+ G
Sbjct: 724 ALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQG 783
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
V K PGCS+ ++ ++H FV GD H + + L
Sbjct: 784 VIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 28/406 (6%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
LG A +F + D+ +N+ I A C P A LY+ I +R
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTG------- 99
Query: 83 LKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
A++ LGR + + V G L+ + A+I Y I AR++FD + R
Sbjct: 100 --AILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR- 156
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+V+ WN+M+ GY + +AR LFE M E+N++SWT +I+GY +++ +A +F +M
Sbjct: 157 -DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E + PD+ +ALSA LG +++ E + + G V + A++++Y++ +
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 262 -GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
A++ FE+M ++ TW+TMIA L+ G A+ ++ ER VK A+++
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSIACR-TALITG 331
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
G ++ R F + EP + + +I + G + EA++L +MPF N
Sbjct: 332 LAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTI 385
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
W ++A G E LQ L H SG LS++ +I
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQEL-----HRSGMLPSLSSLTSIF 426
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI A C I DAR +F+++ + V WN ++ GY + G +N A+ LF+ M +N
Sbjct: 327 ALITGLAQCGRIDDARILFEQIPEPI--VVSWNALITGYMQNGMVNEAKELFDKMPFRNT 384
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISW +IAGYAQ + EA+ L + + + P ++ + AC+ + A+E G +H+
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL 444
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G NALI MY K + A QVF M K +++W + +A L + L EA
Sbjct: 445 AVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504
Query: 296 LDMFSRMERARVKPNEITFIAILSACCH 323
+ F M + +++++ I+SA H
Sbjct: 505 RNTFDNM----LSRDDVSWTTIISAYAH 528
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 174/391 (44%), Gaps = 52/391 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M R + N +L+ + C SL D A ++F + ++ + I + +N A
Sbjct: 153 MPSRDVSSWNSMLTGY---CHSLQMVD-ARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ K+ L PD +F L AV L +++ + + TG + DV + A++ +
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNV 268
Query: 121 YASCKCIYD-ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
Y+ + D A K F+ + R N W+TM+A + G ++ A A++E K++ T
Sbjct: 269 YSRDTSVLDTAIKFFESMIER--NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRT 326
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI G AQ + ++A LF ++ P+ I + W
Sbjct: 327 ALITGLAQCGRIDDARILFEQI------PEPIVV----------------SW-------- 356
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
NALI Y ++G + +A ++F+ M ++ I+W MIAG A +G EAL +
Sbjct: 357 ---------NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLL 407
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC--MIDLL 357
+ R+ + P+ + +I AC ++ +E G + ++ + + + C +I +
Sbjct: 408 QELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK---VGCQFNSFACNALITMY 464
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ ++ A ++ RM + W S LAA
Sbjct: 465 GKCRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
+A I + G++G+A +VF+ M + +I W +MI+ +G+ A D++ + ++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
I +LS +G V RR F+ M R + + MI + G + A +
Sbjct: 98 TGAI----LLSGYGRLGRVLEARRVFDGMLERNTV-----AWNAMISCYVQNGDITMARR 148
Query: 369 LLRRMPFEANAAIWGSLLAA 388
L MP + + W S+L
Sbjct: 149 LFDAMP-SRDVSSWNSMLTG 167
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 273/498 (54%), Gaps = 6/498 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G D + + + I+ G S A +F K D+ +N I + A
Sbjct: 233 IVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEA 292
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY K+ + +F +L A + + GR +H + GLDS+V V AL+ M
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG---DLNNARALFELMTEKNVIS 177
YA C + +ARKVF+ + R + W+T++ YA G D AR +F+ + ++ IS
Sbjct: 353 YAKCGSLEEARKVFNAMKNR--DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTIS 410
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
W +I Y Q A+ +FR M +KPD + +A L ACA LG + + +H I
Sbjct: 411 WNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ L + V + N LI+MYA+ G + +A ++F K K+V++WT M+A + +G EAL
Sbjct: 471 SESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEAL 530
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
D+F M+ VKP+++T+ +IL C H G +E G RYF M + + P + + M+DL
Sbjct: 531 DLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDL 590
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR+G L +A++LL MPFE + W + L A I+G +ELGE A + + +L+P ++ Y
Sbjct: 591 LGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPY 650
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+SNIYA G W + +RK M + G+KK+PG S+IEV ++HEF +G HP D +
Sbjct: 651 IAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEIC 710
Query: 477 QILCKINGQMKFAEHLQN 494
+ L +++G M+ A ++ +
Sbjct: 711 EELTRLHGLMRAAGYVPD 728
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 195/425 (45%), Gaps = 73/425 (17%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD L + + + G A +F D +N I A Q+ + A+ ++
Sbjct: 137 GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ ++P++ ++ V+ + GR+IH + V G D+D+ V ALI MY C
Sbjct: 197 KEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKC 255
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
++AR+VFD++ R ++ WN M+ Y GD
Sbjct: 256 GSSHEAREVFDKMKKR--DMVSWNVMIGCYVLNGDF------------------------ 289
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+EA+ L++++ +E K + ++ L AC+ + A+ G +H++I + GL++
Sbjct: 290 -------HEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSE 342
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG---REALDMFSR 301
V + AL++MYAK G + +A +VF MKN+ + W+T+I A +G G R+A +F R
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402
Query: 302 MER--------------------------------ARVKPNEITFIAILSACCHVG-LVE 328
+ A +KP+ +TFIA+L AC +G L E
Sbjct: 403 LGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE 462
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + I +S +E + +I++ R G L+EAE+L E W +++AA
Sbjct: 463 VKALHAQISESE--LESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAA 519
Query: 389 SNIYG 393
+ YG
Sbjct: 520 FSQYG 524
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 172/356 (48%), Gaps = 41/356 (11%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
+V +N I A Q + A++LY ++ L D+ +F VL A S++ GREIH
Sbjct: 74 NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIH 130
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ +GLDS F L+ N +V YA+ G
Sbjct: 131 NRVFYSGLDS------------------------FQSLA---------NALVTMYARFGS 157
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+ +A+ +F+ + ++ SW +I ++Q + A+ +F+ M+ +VKP+ + +S
Sbjct: 158 VGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISG 216
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+ + G IH I G +T + + ALI+MY K G +A +VF+ MK + +++W
Sbjct: 217 FSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW 276
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
MI L+G EAL+++ +++ K + TF++IL AC V + GR + +
Sbjct: 277 NVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE 336
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 393
R G++ ++ ++++ + G L+EA K+ M +A W +L+ ASN YG
Sbjct: 337 R-GLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYG 390
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 147/322 (45%), Gaps = 37/322 (11%)
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+PDN +F VL + + GR +H + + + D V ALI MY C + DAR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VF+ + R NV WN M+A YA+ G
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNG-------------------------------HST 92
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ L+ RM ++ + D + ++ L AC+ L G IHN + GL++ L NAL+
Sbjct: 93 EALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALV 149
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
MYA+ G +G A ++F++++ + +W +I + G AL +F M + VKPN
Sbjct: 150 TMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNST 208
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T+I ++S ++ GR+ + + G + + +I++ G+ G EA ++ +
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVAN-GFDTDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 373 MPFEANAAIWGSLLAASNIYGD 394
M + + W ++ + GD
Sbjct: 268 MK-KRDMVSWNVMIGCYVLNGD 288
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 265/449 (59%), Gaps = 6/449 (1%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE--LGREIHCQ 101
+ + I L + A ++ + + + P++ +F +L ++ LG +H
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 102 TVGTGLDSD-VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
GLD + V V A+I MY+ AR VFD + + N WNTM+ GY + G +
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK--NSVTWNTMIDGYMRSGQV 156
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
+NA +F+ M E+++ISWT +I G+ + EA+ FR MQ+ VKPD +A++AAL+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
LGA+ G W+H Y+ V ++N+LID+Y + G + A QVF NM+ ++V++W
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
++I G A +G E+L F +M+ KP+ +TF L+AC HVGLVE G RYF IMK
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGE 399
Y I P+IE YGC++DL RAG L++A KL++ MP + N + GSLLAA + +G ++ L E
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
++HL L + NY ILSN+YA G+W + K+R+ M+ +G+KK PG S IE+ +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMKF 488
H F+AGD +H + + ++L I+ ++
Sbjct: 457 HVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 35/286 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D+N+ + ID G D A +F + D+ + I + A++ + +
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S ++PD + L A L + G +H + ++V V +LI +Y C C
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VF + R V WN+++ G+A G+
Sbjct: 257 VEFARQVFYNMEKRT--VVSWNSVIVGFAANGN--------------------------- 287
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIV 245
+E++ FR+MQ + KPD + AL+AC+ +G VE G ++ Y ++ +
Sbjct: 288 ----AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRI 343
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
L+D+Y+++G++ AL++ ++M K + + +++A + HG
Sbjct: 344 EHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 228
T + +SWT+ I + + EA F M + V+P+ I +A LS C G+ L
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 229 GEWIHNYIEQYGLN--------TIVPLN------------------------NALIDMYA 256
G+ +H Y + GL+ I+ + N +ID Y
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
+SG++ A ++F+ M + +I+WT MI G G EAL F M+ + VKP+ + IA
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
L+AC ++G + G + S+ + + +IDL R G ++ A ++ M +
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQ-DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-K 269
Query: 377 ANAAIWGSLLAA 388
W S++
Sbjct: 270 RTVVSWNSVIVG 281
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 34/155 (21%)
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC--- 321
+Q +++ ++WT+ I L +G EA FS M A V+PN ITFIA+LS C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 322 ---------------CHVGL----VELGRRYFNIMKSR-----------YGIEPKIEQYG 351
C +GL V +G + R Y + +
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
MID R+G + A K+ +MP E + W +++
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAMI 178
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 183/484 (37%), Positives = 268/484 (55%), Gaps = 53/484 (10%)
Query: 22 SLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTD--NPLNAVILYNK-IQASALRPDN 76
S FSD YA+ +F +++NT I+A C D A +LY K ++ PD
Sbjct: 70 SSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESSPDK 128
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++FPFVLKA + G+++HCQ V G DV+V LI +Y SC C+ ARKVFDE
Sbjct: 129 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 188
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R ++ WN+M+ + G+ ++ A+
Sbjct: 189 MPER--SLVSWNSMIDALVRFGEYDS-------------------------------ALQ 215
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTIVPLNNALID 253
LFR MQ + +PD M + LSACA LG++ LG W H ++ + + V + N+LI+
Sbjct: 216 LFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 274
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNE 311
MY K G + A QVF+ M+ + + +W MI G A HG EA++ F RM +R V+PN
Sbjct: 275 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 334
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF+ +L AC H G V GR+YF++M Y IEP +E YGC++DL+ RAGY+ EA ++
Sbjct: 335 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 394
Query: 372 RMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHN-------SGNYAILSNIY 423
MP + +A IW SLL A G VEL E +++I + N SG Y +LS +Y
Sbjct: 395 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 454
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A RWN+ G +RK+M + G++K PGCS IE++ HEF AGDTSHP ++YQ L I+
Sbjct: 455 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 514
Query: 484 GQMK 487
+++
Sbjct: 515 DRLR 518
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 265/483 (54%), Gaps = 5/483 (1%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
Q L + I+ G YA +F +V+ + + A A++ + ++
Sbjct: 95 QPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRM 154
Query: 68 QASALRPDNYSFPFVLKAVVKLST--IELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
S RPD +F +L A+ ++ I+ GREIH +GL +V V A+I MY C
Sbjct: 155 YQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCG 214
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ DAR F+EL + N WN M+ Y G A LF M + + + W +IA Y
Sbjct: 215 RLDDARAAFEELQWK--NSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAY 272
Query: 186 AQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
AQ + +A+ L+R M ++ P + + + CA+L A++ G IH + +
Sbjct: 273 AQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDAN 332
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ ++NAL+ MY K G + +AL VF +MK K I+W T+I+ A HG +AL ++ M+
Sbjct: 333 LLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDL 392
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
VKP E+TF+ +LSAC H GLV G YF M+ + I+P + +GC+IDLLGR G L
Sbjct: 393 QGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLA 452
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EAE +L+ MP +ANA W SLL A +GD++ G A ++ P SG Y +LSNIYA
Sbjct: 453 EAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYA 512
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
GRW + KIRK+M GVKK PG S+IE+ VHEFV+GD+SHP + +Y L K+
Sbjct: 513 AAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVE 572
Query: 485 QMK 487
+MK
Sbjct: 573 EMK 575
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 306/566 (54%), Gaps = 74/566 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V GL ++ L+++F+++ ++G YA +F +P V+L+N I+ + +A
Sbjct: 94 LVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDA 153
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIEL-------------------------- 94
+ +Y+++QAS + PD ++ P VLKA + +E+
Sbjct: 154 IEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVAL 213
Query: 95 ----GREIHCQTVGTGLDSDVHVVA--ALIQMYASCKCIYDARKVFDELSLR------VW 142
GR + V GLD D ++V+ ++I Y +A ++F ++ R +
Sbjct: 214 YAKCGRVEQARIVFEGLD-DRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIA 272
Query: 143 NVAVWN-------------------------------TMVAGYAKVGDLNNARALFELMT 171
V+V ++ A YAK G + AR+ F+ M
Sbjct: 273 LVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQME 332
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
NV+ W +I+GYA+ NEA+ LF+ M +N++ D I + +A+ ACAQ+G+++L +W
Sbjct: 333 IPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKW 392
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+ +YI + V +N ALIDM+AK G + A +VF+ +K V+ W+ MI G LHG
Sbjct: 393 MGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGR 452
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
G++A+D+F M++A V PN++TF+ +L+AC H GLVE G F+ MK YGIE + + Y
Sbjct: 453 GQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMK-YYGIEARHQHYA 511
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
C++DLLGR+G+L EA + MP E ++WG+LL A IY V LGE A + L L+P
Sbjct: 512 CVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPF 571
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
N+G+Y LSN+YA W+ K+R +MR+ G+ K G S IE++ ++ F GD SHP
Sbjct: 572 NTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPR 631
Query: 472 FDRLYQILCKINGQMK---FAEHLQN 494
F +++ L + ++K F H+++
Sbjct: 632 FKEIFEELESLERRLKEAGFIPHIES 657
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 283/515 (54%), Gaps = 41/515 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPL 58
+++RGL I S SS YA +IF + +VYL+ T+ + + +P
Sbjct: 31 LLLRGLPLPARAAVTLIASSSS---PQYARAIFDSVPAASANVYLWTATVSSYAKHASPA 87
Query: 59 ---NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A L+ + S RP+ ++ VLK++ KL ++H V GL S +HV A
Sbjct: 88 LAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGLASSLHVGA 147
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
L+ Y + + DAR+VFDE+ NV V N MV+GY K GD+ AR +F+ M E++
Sbjct: 148 TLLDSYGNLCRVKDARRVFDEMPRS--NVVVGNAMVSGYVKAGDVEAARQVFDGMVERDS 205
Query: 176 ISWTTLIAGYA-------------QMDQPN------------------EAITLFRRMQVE 204
ISW TL++GY +M Q N +++ +F +M+
Sbjct: 206 ISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAVFNQMRFM 265
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+ +PD M +SACAQLG + + ++ + + + ++N+L+DM+AK G +A
Sbjct: 266 SFRPDAATMAVLMSACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEA 325
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+F M K V+++ M++ LA HG G++AL +F +M ++P+ +TF+ +LSAC H
Sbjct: 326 HLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAVTFLGVLSACAHA 385
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV+ G+ YF M + Y IE + Y CM+DL GR G ++EA ++ MP + +A IWG+
Sbjct: 386 GLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGA 445
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A + ++++GE A + LI++EP N GNY +LSN A +W+ G +R++MR G+
Sbjct: 446 LLNACRKHCNIDVGEVAARELIRIEPMNPGNYVLLSNTLAWSQQWDAVGDVRQLMRGNGI 505
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K G S++EV VHEF+ GD SHP FD + IL
Sbjct: 506 DKNTGFSWVEVESVVHEFLMGDFSHPSFDEICGIL 540
>gi|224141397|ref|XP_002324059.1| predicted protein [Populus trichocarpa]
gi|222867061|gb|EEF04192.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/498 (36%), Positives = 280/498 (56%), Gaps = 41/498 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
++V GL Q+ +LL+ I CS YA+S+ + S + +N I+ D P
Sbjct: 43 ILVSGLQQDTNLLTELIRFCSLSPSKHLSYAHSLL-YNSLDSLPPWNFLIRGYASGDAPK 101
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
NA+ ++++++ + P+N++FPFVLKA +E G+++H GLD DV+V L+
Sbjct: 102 NAIRVFHRMRKEGVGPNNFTFPFVLKACATCLALEEGKQVHADIFKFGLDCDVYVNNNLV 161
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y SCK I+DA KVFDE+ +R +++SW
Sbjct: 162 HLYGSCKRIWDACKVFDEMPVR---------------------------------SIVSW 188
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
++I Q +AI F +M+ +P+E M+ LS CAQ+G + LG WIH+ + +
Sbjct: 189 NSVITACVQNLWLGDAIWNFVKMKDFGFEPNETTMVIMLSLCAQIGNLSLGRWIHSQVIE 248
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ L AL+DMYAKSG +G A VF+ M+ K+V TW+ MI GLA HG G+E L++
Sbjct: 249 RGMTLNCQLGTALVDMYAKSGDLGYAKLVFDRMEKKNVWTWSAMILGLAQHGFGKEGLEL 308
Query: 299 FSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F +M E + PN +TF+ +L AC H GLV+ G RYF M+ R+GI P + YG M+D+L
Sbjct: 309 FLKMKESVSICPNYVTFLGVLCACSHAGLVDEGFRYFYEMEHRHGIRPMVIHYGAMVDIL 368
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY-GDVELG--ECALQHLIKLEPHNSG 414
GRAG L+EA L +PF+ + +W +LL+A NI+ +V G + + L++LEP S
Sbjct: 369 GRAGNLEEAYNFLMDVPFQPDPILWRTLLSACNIHNANVSDGLVDKVRKKLLELEPRRSE 428
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
N+ I++N+YA G W + +R+ MRD G+KK+ G S I + +H+F +G S D +
Sbjct: 429 NFVIIANMYADAGMWETATNVRRTMRDGGLKKIGGESCIVLEGSIHQFFSG-CSKDDHES 487
Query: 475 LYQILCKINGQMKFAEHL 492
+ +L +N MK L
Sbjct: 488 IELLLDGLNLNMKMVNSL 505
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 261/478 (54%), Gaps = 45/478 (9%)
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI 127
Q L P P K+ + LGR+IH T GLD +V V + I MYA C
Sbjct: 4 QGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRP 63
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAGYAKVG----------------------------- 158
DA ++F+E+ R +V WN M++G+A G
Sbjct: 64 DDAYQMFEEMQYR--DVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASIL 121
Query: 159 ---------DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
D+ + +F+ M K +ISW ++A Y + EA+ LF RMQ + ++PD
Sbjct: 122 PSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPD 181
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ + L +C ++ A+ LG+ IH I++ + + + L NAL+DMYA G + +A VF+
Sbjct: 182 AVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFD 241
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
+M + V++WT++I+ HG GREA+D+F +M ++P+ I F+AIL+AC H GL+++
Sbjct: 242 SMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDM 301
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G+ YF M S + I PK+E Y CM+DLLGRAG ++EA + MP + N +WG+LL A
Sbjct: 302 GKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGAC 361
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
I+ ++++G A L++L P +G Y +LSNIYA GRW + +R VM G+KK+PG
Sbjct: 362 RIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPG 421
Query: 450 CSYIEVSKRVHEFVAGDTSHPD----FDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
S E+ RVH F GDTSHP + +L ++L +I +M + ++ V E D
Sbjct: 422 VSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIR-EMGYNPEVEATLHDVEEED 478
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 188/484 (38%), Positives = 269/484 (55%), Gaps = 53/484 (10%)
Query: 22 SLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTD--NPLNAVILYNK-IQASALRPDN 76
S FSD YA+ +F +++NT I+A C D A +LY K ++ PD
Sbjct: 74 SSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESAPDK 132
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++FPFVLKA + + G+++HCQ V G DV+V LI Y SC C+ ARKVFDE
Sbjct: 133 HTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDE 192
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R ++ WN+M+ +VG+ ++ A+
Sbjct: 193 MPER--SLVSWNSMIDALVRVGEYDS-------------------------------ALQ 219
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTIVPLNNALID 253
LFR MQ ++ +PD M + LSACA LG++ LG W H ++ + + V + N+LI+
Sbjct: 220 LFRDMQ-KSFEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIE 278
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNE 311
MY K G + A QVF+ M+ + +W MI G A HG EA++ F M E VKPN
Sbjct: 279 MYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNS 338
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF+A+L AC H G+V GR+YF++M YGIEP +E YGC+IDLL RAGY+ EA ++
Sbjct: 339 VTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMVM 398
Query: 372 RMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHN-------SGNYAILSNIY 423
MP + +A IW SLL A G VEL E +++I N SG Y +LS +Y
Sbjct: 399 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVY 458
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A RWN+ G +RK+M D G++K PGCS IE++ +EF AGDTSHP ++YQ L I+
Sbjct: 459 ASANRWNDVGIVRKLMSDHGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVID 518
Query: 484 GQMK 487
+++
Sbjct: 519 DRLR 522
>gi|225456719|ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 529
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 282/527 (53%), Gaps = 73/527 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL---GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI G N L S+ + S +S+ G + A I D Y +NT I+ + ++P
Sbjct: 1 MITNGHLHNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDP 60
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+++YN ++ L+ D Y+ FV+KA I G +IH Q G + +V + AL
Sbjct: 61 EEAILVYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTAL 120
Query: 118 IQM-------------------------------YASCKCIYDARKVFDEL--------- 137
+ + YA C Y R+V ++
Sbjct: 121 LNLYGLFDEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNG 180
Query: 138 -----------SLRV-----------------WNVAVWNTMVAGYAKVGDLNNARALFEL 169
SLR ++V V N ++ Y+K G + +A +F+L
Sbjct: 181 VTAVSILSVCSSLRALREGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQL 240
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M +NV+SWT+LI GY+ + PNEA+ F++M+ EN++PDEI +L + C++L + ELG
Sbjct: 241 MPMRNVVSWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELG 300
Query: 230 EWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
EWI Y+ + GL P + NAL+DM+AK G I +A Q+F+ M+ K++++WT MI GLA+
Sbjct: 301 EWISQYVVKIGLLKESPAIANALMDMHAKCGNINRACQIFDGMEEKTIVSWTIMIQGLAM 360
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
HG G AL F +M+R KP+ + F+++LSAC H GLV+ G R F+ M++ Y I P +E
Sbjct: 361 HGHGLSALVRFCQMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHISPWME 420
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
YGCM+D+L RAG + EA K ++ MP + + +W +LL A + G++ L + +L +L
Sbjct: 421 HYGCMVDILCRAGLVDEAFKFVQNMPIKPDMIVWRTLLGACHTQGNISLANQVMNYLCEL 480
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGCSYIE 454
P S +Y +LSN++A W+ G++RK M D GV K PGCS+IE
Sbjct: 481 GPKKSEDYVLLSNLFASNAEWDNVGEVRKEMGDRGVTKQDPGCSFIE 527
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 226/339 (66%), Gaps = 3/339 (0%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A+I Y C + ARK+FDE+ R NV + TM+ GYAK GD+ +AR +FE E++V
Sbjct: 225 AIISGYVKCGDLRSARKMFDEMPHR--NVVSFTTMIDGYAKSGDMASARFVFEEAPERDV 282
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++W+ LI+GY Q QPNEA+ +F M NVKPDE M++ +SAC+Q+G++EL +W+ +Y
Sbjct: 283 VAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDY 342
Query: 236 IEQYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
+ + ++ + ALIDM AK G + +A ++FE M + +I++ +M+ GL++HG G +
Sbjct: 343 VRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQ 402
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ +FSRM + P+++ F IL+AC GLV+ G YF MK+ Y I P + Y CM+
Sbjct: 403 AVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMV 462
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRAG L+EA +LL+ MP E +A WG+LL A ++ D+ELGE L +LEP N+G
Sbjct: 463 DLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAG 522
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
NY +LSNIYA +W + +R MR+ G++K+PGCS+I
Sbjct: 523 NYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 187/393 (47%), Gaps = 42/393 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +GL Q++ ++S+F+ C+SL Y S+F S P L+NT IK + +
Sbjct: 48 IIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLT 107
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ +++ S PD +++P ++KA K+ ++ G H V G+ DV V+ +LI +
Sbjct: 108 VSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDL 167
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C I ARKVFDE+ R NV W M+AGYA DL AR LF+ M EKN +SW
Sbjct: 168 YGKCGEILCARKVFDEMGER--NVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNA 225
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I+GY + A +F M NV
Sbjct: 226 IISGYVKCGDLRSARKMFDEMPHRNVVS-------------------------------- 253
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ID YAKSG + A VFE + V+ W+ +I+G +G EA+ +F
Sbjct: 254 -------FTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFL 306
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M VKP+E ++++SAC +G +EL + + ++ + +ID+ +
Sbjct: 307 EMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKC 366
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G + A KL MP + + + S++ +I+G
Sbjct: 367 GSMDRATKLFEEMP-KRDLISYCSMMQGLSIHG 398
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 127/283 (44%), Gaps = 42/283 (14%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
+ ID + G A +F + DV ++ I Q P AV ++ ++ + +
Sbjct: 254 FTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNV 313
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLD-SDVHVVAALIQMYASCKCIYDAR 131
+PD + ++ A ++ ++EL + + + +D HV+AALI M A C
Sbjct: 314 KPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKC------- 366
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
G ++ A LFE M ++++IS+ +++ G +
Sbjct: 367 --------------------------GSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCG 400
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-TIVPLNN- 249
+A++LF RM E + PD++A L+AC++ G V+ G + Y E + +IVP +
Sbjct: 401 PQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCY---YFESMKTDYSIVPSPDH 457
Query: 250 --ALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
++D+ ++G++ +A ++ ++M W ++ LH
Sbjct: 458 YACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLH 500
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 256/449 (57%), Gaps = 29/449 (6%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L Q+N +LS FI C +L YA +F P++ L+N+ IK N+++L++
Sbjct: 37 LHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGPSENSLLLFS 96
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ + PD ++F +LK+ + +G+ +H + G + + +I +Y SC
Sbjct: 97 QMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCG 156
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ DA+KVFDE+ L M +++V+SW ++IAG
Sbjct: 157 RMEDAKKVFDEM----------------------------LDRDMRDRSVVSWNSMIAGL 188
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTI 244
Q + EA+ LFR M +PD+ ++ L CA+LGAV++GEWIH+Y E L
Sbjct: 189 EQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDF 248
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + N+L+D Y K G + A +VF M K+V++W MI+GL +G G D+F M
Sbjct: 249 ISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMIN 308
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V+PN+ TF+ +LS C H GLVE GR F M + +EPK+E +GCM+DLL R G ++
Sbjct: 309 KGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCME 368
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA L+R MP NA +WGSLL+A GDV+ ECA++ LI+LEP NSGNY +LSN+YA
Sbjct: 369 EARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYA 428
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
G+W+E K+R +M++ ++K PG S +
Sbjct: 429 EDGKWDEVEKVRALMKEKNIRKNPGQSMV 457
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 38/206 (18%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH +I ++ L+ + + I + K+G A VF +N +++ + +MI G +L G
Sbjct: 28 IHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGP 87
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACC--------------------------HVG 325
+L +FS+M+ + P+E TF +L +C +G
Sbjct: 88 SENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIG 147
Query: 326 LVEL---------GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM--- 373
+++L ++ F+ M R + + + MI L ++G EA +L R M
Sbjct: 148 IIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDH 207
Query: 374 PFEANAAIWGSLLAASNIYGDVELGE 399
FE + A ++L G V++GE
Sbjct: 208 GFEPDDATVVTILPVCARLGAVDVGE 233
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 257/427 (60%), Gaps = 9/427 (2%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCK 125
+ A+ PD + V+ A L+ GR++H V L D+ + AL+ MYA C
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
++AR +FD + R +V +++AGYAK ++ +A+ +F M EKNVI+W LIA Y
Sbjct: 61 RTWEARCIFDSMPSR--SVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAY 118
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ------Y 239
AQ + EAI LF +++ +++ P L+AC + ++LG+ H ++ + +
Sbjct: 119 AQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDF 178
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + V + N+L+DMY K+G I +VFE M + ++W MI G A +G ++AL +F
Sbjct: 179 GPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLF 238
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
RM + P+ +T I +LSAC H GLV+ GRR+F+ M +GI P + Y CM+DLLGR
Sbjct: 239 ERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGR 298
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG+L+EAE+L++ MP E ++ +W SLL A ++ +VELGE L +L+P NSG Y +L
Sbjct: 299 AGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLL 358
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SN+YA +G+W + ++R+ M+D GV K PGCS+IE+ +++ F+A D HP + ++ L
Sbjct: 359 SNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 418
Query: 480 CKINGQM 486
I +M
Sbjct: 419 RIIQMEM 425
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 41/269 (15%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F+ + +V +N I A Q A+ L+ +++ ++ P +Y++ VL A
Sbjct: 96 AQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 155
Query: 89 LSTIELGREIHCQTVGTGL------DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
++ ++LG++ H + G +SDV V +L+ MY I D KVF+ ++ R
Sbjct: 156 IAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARD- 214
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
NV+ WN M+ GYA+ N RA +A+ LF RM
Sbjct: 215 NVS-WNAMIVGYAQ-----NGRA--------------------------KDALHLFERML 242
Query: 203 VENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
N PD + M+ LSAC G V+ G H E +G+ ++D+ ++G +
Sbjct: 243 CSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHL 302
Query: 262 GKALQVFENMKNK-SVITWTTMIAGLALH 289
+A ++ ++M + + W +++ LH
Sbjct: 303 KEAEELIKDMPTEPDSVLWASLLGACRLH 331
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 263/470 (55%), Gaps = 36/470 (7%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C L + A+++ K D+ +N I Q + A+ L+ ++ + + +
Sbjct: 380 CDLLEDARMAFNLLPEK---DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTL 436
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
+LK+ L + + R++H +V +G SD++VV +LI Y C + DA ++F+E +
Sbjct: 437 STILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT- 495
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+GDL +S+T++I YAQ Q EA+ LF
Sbjct: 496 -----------------IGDL---------------VSFTSMITAYAQYGQGEEALKLFL 523
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
MQ +KPD + L+ACA L A E G+ +H +I +YG + N+L++MYAK G
Sbjct: 524 EMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCG 583
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
I A + F + + +++W+ MI GLA HG GR+AL +F++M + V PN IT +++L
Sbjct: 584 SIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLG 643
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLV + YF M+ +G +P E Y CMIDLLGRAG + EA +L+ +MPFEANA
Sbjct: 644 ACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANA 703
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
++WG+LL A+ I+ DVELG A + L LEP SG + +L+NIYA G+W ++R++M
Sbjct: 704 SVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLM 763
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
RD VKK PG S+IEV +V+ F+ GD SH +Y L +++ M A
Sbjct: 764 RDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKA 813
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 45/339 (13%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
NHL++ + C G YA + S+PD+ ++ I Q A++ ++++
Sbjct: 95 NHLINLY-SKCRXFG---YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
++ + ++F VLKA + + +G+++H V +G + DV V L+ MYA C D
Sbjct: 151 LGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD 210
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
++++FDE+ R NV WN L + Y Q D
Sbjct: 211 SKRLFDEIPER--NVVSWN-------------------------------ALFSCYVQXD 237
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
EA+ LF M + +KP+E ++ + ++AC L G+ IH Y+ + G + N
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA---- 305
AL+DMYAK G + A+ VFE +K +++W +IAG LH +AL++ +M+R
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSS 357
Query: 306 ----RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
++ + + ++ L+E R FN++ +
Sbjct: 358 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK 396
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 201/449 (44%), Gaps = 56/449 (12%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F + +V +N Q D AV L+ ++ S ++P+ +S ++ A L
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
G+ IH + G D D AL+ MYA + DA VF+++ + ++ WN ++
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI--KQPDIVSWNAVI 331
Query: 152 AG-------------------------------------------YAKVGDLNNARALFE 168
AG Y+K L +AR F
Sbjct: 332 AGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFN 391
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
L+ EK++I+W +I+GY+Q + EA++LF M E + ++ + L + A L V +
Sbjct: 392 LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHV 451
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
+H + G ++ + + N+LID Y K + A ++FE ++++T+MI A
Sbjct: 452 CRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQ 511
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKI 347
+G G EAL +F M+ +KP+ ++L+AC ++ E G++ + +I+K YG I
Sbjct: 512 YGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK--YGFVLDI 569
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
++++ + G + +A + + E W +++ +G G ALQ +
Sbjct: 570 FAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQHGH---GRQALQLFNQ 625
Query: 408 -LEPHNSGNYAILSNIYAILGRWNESGKI 435
L+ S N+ L ++LG N +G +
Sbjct: 626 MLKEGVSPNHITL---VSVLGACNHAGLV 651
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 163/365 (44%), Gaps = 47/365 (12%)
Query: 54 TDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHV 113
+++P IL N I P + S+ +L ++ G +IH +GL D +
Sbjct: 35 SEDPQTTAIL-NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSI 93
Query: 114 VAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK 173
LI +Y+ C+ GYA R L + +E
Sbjct: 94 RNHLINLYSKCRXF-------------------------GYA--------RKLVDESSEP 120
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
+++SW+ LI+GYAQ A+ F M + VK +E + L AC+ + + +G+ +H
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ G V + N L+ MYAK + + ++F+ + ++V++W + +
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCG 240
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR---YFNIMKSRYGIEPKIEQY 350
EA+ +F M + +KPNE + ++++AC GL + R + ++K Y +P
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPF--SA 296
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL--IKL 408
++D+ + G L +A + ++ + + W +++A ++ E E AL+ L +K
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH---EHHEQALELLGQMKR 352
Query: 409 EPHNS 413
+ H+S
Sbjct: 353 QLHSS 357
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 42/309 (13%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++++ IDS + A IF + D+ + + I A Q A+ L+
Sbjct: 463 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 522
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L+PD + +L A LS E G+++H + G D+ +L+ MYA C
Sbjct: 523 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC 582
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I DA + F EL+ R + W+ M+ G A+ G
Sbjct: 583 GSIDDAGRAFSELTER--GIVSWSAMIGGLAQHG-------------------------- 614
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-ELGEWIHNYIEQYGLNT 243
+A+ LF +M E V P+ I +++ L AC G V E + + E +G
Sbjct: 615 -----HGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKP 669
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK---NKSVITWTTMIAGLALHG---LGREALD 297
+ +ID+ ++GKI +A+++ M N SV W ++ +H LGR A +
Sbjct: 670 MQEHYACMIDLLGRAGKINEAVELVNKMPFEANASV--WGALLGAARIHKDVELGRRAAE 727
Query: 298 MFSRMERAR 306
M +E +
Sbjct: 728 MLFILEPEK 736
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI Q + + + + N P ++ LS C ++ G IH +I + G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L+ + N LI++Y+K G A ++ + +++W+ +I+G A +GLG AL F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M VK NE TF ++L AC V + +G++ ++ G E + ++ + +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEGDVFVANTLVVMYAKC 205
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLA 387
++++L +P E N W +L +
Sbjct: 206 DEFLDSKRLFDEIP-ERNVVSWNALFS 231
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 269/474 (56%), Gaps = 62/474 (13%)
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+++ F++KA+ + R H V G D V ALI Y+ + + DA+KVFD
Sbjct: 202 TFTYSFLIKALAAAGLTPV-RGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFD 260
Query: 136 ELSLR---VWNVAV--------------------------WNTMVAGYAKVGDLNNARAL 166
E++ R WN A+ WNTM+ GYAK G+ A L
Sbjct: 261 EMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFEL 320
Query: 167 FELMTEKNVISWTTLIAGY-------------------------------AQMDQPNEAI 195
F+ M +NV+SW+T+++ Y AQ EA
Sbjct: 321 FQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAG 380
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF M ++ D IA+++ L+ACA+ G++ LG+ IH ++ Q L+ + NAL+DM+
Sbjct: 381 RLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMF 440
Query: 256 AKSGKIGKALQVFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
K G + +A +F+ + K +++W +I G A+HG G +AL++F++M++ P+ +T
Sbjct: 441 CKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTL 500
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
I +LSAC H+GLVE GRR+F M++ YGI+P+IE YGCM+DLLGR G ++EA +++RMP
Sbjct: 501 INVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMP 560
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
+E N IWGSLL+A ++ +VE E A+ L L+P ++GNYA+LSNIYA G+W++ K
Sbjct: 561 WEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAK 620
Query: 435 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
R M+ G +K G S+IE+++ HEF GD HP+ D++ ++ +++ +KF
Sbjct: 621 ARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVKF 674
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 67/308 (21%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA------ 69
+D + G ++ A+ +F +V ++T + A C+ + A ++++K+ A
Sbjct: 304 MLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTW 363
Query: 70 -------------------------SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
+A+ D + +L A + ++ LG+ IH
Sbjct: 364 TIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQ 423
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
L V AL+ M+ C C+ A +FD + ++ WN ++ G+A
Sbjct: 424 RKLSRSTLVCNALMDMFCKCGCVNRADYIFDT-EIVEKDLVSWNIIIGGFA--------- 473
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNE-AITLFRRMQVENVKPDEIAMLAALSACAQL 223
M P E A+ LF +M+ + PD + ++ LSAC +
Sbjct: 474 -----------------------MHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHM 510
Query: 224 GAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTT 281
G VE G + N YG+ + ++D+ + G I +A+ + + M + + W +
Sbjct: 511 GLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGS 570
Query: 282 MIAGLALH 289
+++ LH
Sbjct: 571 LLSACRLH 578
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 155/387 (40%), Gaps = 85/387 (21%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYA------SCKCIYDAR------------------ 131
+E+H Q + GL D H + LI YA +C+C++ A
Sbjct: 115 QELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTLLTKT 174
Query: 132 ---------------KVFDELSLRVWNVAVWNTMVAGYAKVG--DLNNARA-LFELMTEK 173
VF ++ LR ++ ++ A G + A A + +L + +
Sbjct: 175 LLRAYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKLGSAE 234
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
+ LI Y++ ++A +F M +V ++ A++A + G V+ +
Sbjct: 235 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDV----VSWNTAMAAMVRQGEVDAARSMF 290
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV----------------- 276
+ + + + N ++D YAK+G+ KA ++F+ M ++V
Sbjct: 291 DEMPEKDTVSW----NTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDME 346
Query: 277 --------------ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+TWT M++ A GL EA +F+ M A ++ + I ++IL+AC
Sbjct: 347 MARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACA 406
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
G + LG+R ++ R + ++D+ + G + A+ + E + W
Sbjct: 407 ESGSLALGKRIHRHVRQRK-LSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSW 465
Query: 383 GSLLAASNIYGDVELGECALQHLIKLE 409
++ ++G GE AL+ +++
Sbjct: 466 NIIIGGFAMHGP---GEKALELFAQMK 489
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 184/523 (35%), Positives = 274/523 (52%), Gaps = 82/523 (15%)
Query: 13 LSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
LS+ ID C F D YA + P VY++N+ I+ + NP +++LY ++ +
Sbjct: 39 LSKLIDFCVDSEFGDINYADLVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIEN 98
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC------ 124
PD+++FPFVLKA ++ + G+ IH V +G ++D + L+ MY SC
Sbjct: 99 GYSPDHFTFPFVLKACCVIADQDCGKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSG 158
Query: 125 ---------------KCI----------YDARKVFDELSLRVWNV-----AVWNTMVAG- 153
C+ Y+A KVF+++S WNV + N ++A
Sbjct: 159 LKVFDNIPKWNVVAWTCLIAGYVKNNQPYEALKVFEDMSH--WNVEPNEITMVNALIACA 216
Query: 154 ----------------------------------------YAKVGDLNNARALFELMTEK 173
YAK G L AR LF M ++
Sbjct: 217 HSRDIDTGRWVHQRIRKAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQR 276
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
N++SW ++I Y Q ++ EA+ LF M V PD+ L+ LS CA A+ LG+ +H
Sbjct: 277 NIVSWNSMINAYNQYERHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVH 336
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
Y+ + G+ T + L AL+DMYAK+G++G A ++F +++ K V+ WT+MI GLA+HG G
Sbjct: 337 AYLLKTGIATDISLATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGN 396
Query: 294 EALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
EAL MF M E + + P+ IT+I +L AC HVGLVE +++F +M YG+ P E YGC
Sbjct: 397 EALSMFQTMQEDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGC 456
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
M+DLL RAG+ +EAE+L+ M + N AIWG+LL I+ +V + L +LEP
Sbjct: 457 MVDLLSRAGHFREAERLMETMTVQPNIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQ 516
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
SG + +LSNIYA GRW E RKVM+ + K G S +E+
Sbjct: 517 SGVHILLSNIYAKAGRWEEVNVTRKVMKHKRITKTIGHSSVEM 559
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 254/449 (56%), Gaps = 36/449 (8%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N I+ +D+P A+ L+ +++ +RP+N +FPF+LKA L+T++ G++ H +
Sbjct: 99 WNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAI 158
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
GLD DV+V LI Y SCK ++ A
Sbjct: 159 KCGLDLDVYVRNTLINFYGSCK---------------------------------RMSGA 185
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
R +F+ MTE+ ++SW +I + +EAI F +M +PDE M+ LSACA+L
Sbjct: 186 RKVFDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAEL 245
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
G + LG W+H+ + G+ V L A +DMYAKSG +G A VF +K KSV TW+ MI
Sbjct: 246 GNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMI 305
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
GLA HG EA+++F+ M + + PN +TFI +L AC H GLV+ YFN+M+ YGI
Sbjct: 306 LGLAQHGFANEAIELFTNMTSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGI 365
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS---NIYGDVELGEC 400
+P + YG M+D+LGRAG ++EA +L+ MP E + +W +LL+A ++ G E+ E
Sbjct: 366 KPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEE 425
Query: 401 ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVH 460
A + L++LEP GN +++N +A LG W ++ R+ M+D G+KKM G S IE+ +
Sbjct: 426 ARKRLLELEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIELGGSLR 485
Query: 461 EFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+F +G S D +Y +L +N M+
Sbjct: 486 KFFSGFDSRAAPDGIYDLLDGLNLHMQLT 514
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 225
LF + W +I GY+ D P EAI+LF M+ V+P+ + L ACA L
Sbjct: 87 LFHCHFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLAT 146
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
++ G+ H + GL+ V + N LI+ Y ++ A +VF+ M +++++W +I
Sbjct: 147 LQEGKQFHAIAIKCGLDLDVYVRNTLINFYGSCKRMSGARKVFDEMTERTLVSWNAVITA 206
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
+ EA+D F +M +P+E T + ILSAC +G + LGR + + R G+
Sbjct: 207 CVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGR-GMVL 265
Query: 346 KIEQYGCMIDLLGRAG 361
++ +D+ ++G
Sbjct: 266 NVQLGTAFVDMYAKSG 281
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 35/282 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + ++ + I+ S A +F ++ + +N I A + A+ +
Sbjct: 161 GLDLDVYVRNTLINFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAIDYF 220
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+ PD + +L A +L + LGR +H Q VG G+ +V + A + MYA
Sbjct: 221 LKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYAKS 280
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR VF+ L + +V W+ M+ G A+ G
Sbjct: 281 GDVGCARHVFNCLKQK--SVWTWSAMILGLAQ--------------------------HG 312
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNT 243
+A NEAI LF M + P+ + + L AC+ G V+ N +E+ YG+
Sbjct: 313 FA-----NEAIELFTNMTSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKP 367
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIA 284
++ +++D+ ++G++ +A ++ +M I W T+++
Sbjct: 368 MMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLS 409
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 183/484 (37%), Positives = 268/484 (55%), Gaps = 53/484 (10%)
Query: 22 SLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTD--NPLNAVILYNK-IQASALRPDN 76
S FSD YA+ +F +++NT I+A C D A +LY K ++ PD
Sbjct: 150 SSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESSPDK 208
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++FPFVLKA + G+++HCQ V G DV+V LI +Y SC C+ ARKVFDE
Sbjct: 209 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 268
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R ++ WN+M+ + G+ ++ A+
Sbjct: 269 MPER--SLVSWNSMIDALVRFGEYDS-------------------------------ALQ 295
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTIVPLNNALID 253
LFR MQ + +PD M + LSACA LG++ LG W H ++ + + V + N+LI+
Sbjct: 296 LFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 354
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNE 311
MY K G + A QVF+ M+ + + +W MI G A HG EA++ F RM +R V+PN
Sbjct: 355 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 414
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF+ +L AC H G V GR+YF++M Y IEP +E YGC++DL+ RAGY+ EA ++
Sbjct: 415 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 474
Query: 372 RMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHN-------SGNYAILSNIY 423
MP + +A IW SLL A G VEL E +++I + N SG Y +LS +Y
Sbjct: 475 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 534
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A RWN+ G +RK+M + G++K PGCS IE++ HEF AGDTSHP ++YQ L I+
Sbjct: 535 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 594
Query: 484 GQMK 487
+++
Sbjct: 595 DRLR 598
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 269/474 (56%), Gaps = 62/474 (13%)
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+++ F++KA+ + R H V G D V ALI Y+ + + DA+KVFD
Sbjct: 130 TFTYSFLIKALAAAGLTPV-RGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFD 188
Query: 136 ELSLR---VWNVAV--------------------------WNTMVAGYAKVGDLNNARAL 166
E++ R WN A+ WNTM+ GYAK G+ A L
Sbjct: 189 EMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFEL 248
Query: 167 FELMTEKNVISWTTLIAGY-------------------------------AQMDQPNEAI 195
F+ M +NV+SW+T+++ Y AQ EA
Sbjct: 249 FQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAG 308
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF M ++ D IA+++ L+ACA+ G++ LG+ IH ++ Q L+ + NAL+DM+
Sbjct: 309 RLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMF 368
Query: 256 AKSGKIGKALQVFEN-MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
K G + +A +F+ + K +++W +I G A+HG G +AL++F++M++ P+ +T
Sbjct: 369 CKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTL 428
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
I +LSAC H+GLVE GRR+F M++ YGI+P+IE YGCM+DLLGR G ++EA +++RMP
Sbjct: 429 INVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMP 488
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
+E N IWGSLL+A ++ +VE E A+ L L+P ++GNYA+LSNIYA G+W++ K
Sbjct: 489 WEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAK 548
Query: 435 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
R M+ G +K G S+IE+++ HEF GD HP+ D++ ++ +++ +KF
Sbjct: 549 ARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVKF 602
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 67/308 (21%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA------ 69
+D + G ++ A+ +F +V ++T + A C+ + A ++++K+ A
Sbjct: 232 MLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTW 291
Query: 70 -------------------------SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
+A+ D + +L A + ++ LG+ IH
Sbjct: 292 TIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQ 351
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
L V AL+ M+ C C+ A +FD + ++ WN ++ G+A
Sbjct: 352 RKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEK-DLVSWNIIIGGFA--------- 401
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNE-AITLFRRMQVENVKPDEIAMLAALSACAQL 223
M P E A+ LF +M+ + PD + ++ LSAC +
Sbjct: 402 -----------------------MHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHM 438
Query: 224 GAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTT 281
G VE G + N YG+ + ++D+ + G I +A+ + + M + + W +
Sbjct: 439 GLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGS 498
Query: 282 MIAGLALH 289
+++ LH
Sbjct: 499 LLSACRLH 506
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 155/387 (40%), Gaps = 85/387 (21%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYA------SCKCIYDAR------------------ 131
+E+H Q + GL D H + LI YA +C+C++ A
Sbjct: 43 QELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTLLTKT 102
Query: 132 ---------------KVFDELSLRVWNVAVWNTMVAGYAKVG--DLNNARA-LFELMTEK 173
VF ++ LR ++ ++ A G + A A + +L + +
Sbjct: 103 LLRAYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKLGSAE 162
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
+ LI Y++ ++A +F M +V ++ A++A + G V+ +
Sbjct: 163 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDV----VSWNTAMAAMVRQGEVDAARSMF 218
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV----------------- 276
+ + + + N ++D YAK+G+ KA ++F+ M ++V
Sbjct: 219 DEMPEKDTVSW----NTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDME 274
Query: 277 --------------ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+TWT M++ A GL EA +F+ M A ++ + I ++IL+AC
Sbjct: 275 MARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACA 334
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
G + LG+R ++ R + ++D+ + G + A+ + E + W
Sbjct: 335 ESGSLALGKRIHRHVRQRK-LSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSW 393
Query: 383 GSLLAASNIYGDVELGECALQHLIKLE 409
++ ++G GE AL+ +++
Sbjct: 394 NIIIGGFAMHGP---GEKALELFAQMK 417
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 279/530 (52%), Gaps = 72/530 (13%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A+ IF + +V L+N + A Q + + ++ ++QA+ + P+ +++P +L+
Sbjct: 297 ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTC 356
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
IELG +IH ++ G +SD++V LI MY+ C+ ARK+ + L R +V
Sbjct: 357 TCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKR--DVVS 414
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNV------------------------------- 175
W +M+AGY + A A F+ M + V
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY 474
Query: 176 -------IS-WTTLIAGYAQMDQPNEAITLFR---------------------------- 199
IS W TL+ YA+ + EA +LFR
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALM 534
Query: 200 ---RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
+M K + ++A+SA A L ++ G+ +H + G + + NALI +Y
Sbjct: 535 VFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYG 594
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G I A +F M ++ ++W T+I + HG G EALD+F +M++ +KPN++TFI
Sbjct: 595 KCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIG 654
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L+AC HVGLVE G YF M + YG+ P + Y C++D+LGRAG L A + + MP
Sbjct: 655 VLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPIT 714
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
ANA IW +LL+A ++ ++E+GE A +HL++LEPH+S +Y +LSN YA+ G+W ++R
Sbjct: 715 ANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVR 774
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
K+M+D G++K PG S+IEV VH F GD HP D++Y+ L ++N ++
Sbjct: 775 KMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL 824
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 179/406 (44%), Gaps = 43/406 (10%)
Query: 23 LGFSDY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
LGF + A +F D +NT I Q + A+ +++++Q S LRPD +
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A + ++ G+++H + G+ D +L+ +Y C
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC---------------- 293
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
GD+ A +F L NV+ W ++ Y Q+ ++ +F +
Sbjct: 294 -----------------GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQ 336
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
MQ + P++ L C G +ELGE IH+ + G + + ++ LIDMY+K G
Sbjct: 337 MQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGC 396
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ KA ++ E ++ + V++WT+MIAG H EAL F M+ V P+ I + SA
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASA 456
Query: 321 CCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
C + + G + + + S Y + I + +++L R G +EA L R + + +
Sbjct: 457 CAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLFREIEHK-DE 513
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
W L++ +G L + AL +K+ Y + + I AI
Sbjct: 514 ITWNGLISG---FGQSRLYKQALMVFMKM-GQAGAKYNVFTFISAI 555
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 168/387 (43%), Gaps = 35/387 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+VRGL + + + ID + G A +F S D + + Q+ A
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAF 129
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY+++ +A+ P Y VL A K GR IH Q S+ V ALI +Y
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY 189
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
G A +F M + +++ TL
Sbjct: 190 LG---------------------------------FGSFKLAERVFCDMLFCDRVTFNTL 216
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+G+AQ A+ +F MQ+ ++PD + + + L+ACA +G ++ G+ +H+Y+ + G+
Sbjct: 217 ISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGM 276
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ +L+D+Y K G I A +F +V+ W M+ ++ ++F +
Sbjct: 277 SFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQ 336
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ + PN+ T+ IL C G +ELG + + + + G E + G +ID+ + G
Sbjct: 337 MQATGIHPNQFTYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYG 395
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAA 388
L +A K+L + + + W S++A
Sbjct: 396 CLDKARKILEMLE-KRDVVSWTSMIAG 421
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 35/268 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G S+ A+S+F D +N I Q+ A++++ K+ + + + ++F +
Sbjct: 496 GRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAI 555
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A+ L+ I+ G+++H + V TG S+ V ALI +Y C I DA+ +F E+SLR N
Sbjct: 556 SALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR--N 613
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WNT++ ++ G R L EA+ LF +M+
Sbjct: 614 EVSWNTIITSCSQHG-----RGL--------------------------EALDLFDQMKQ 642
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E +KP+++ + L+AC+ +G VE G + + YGLN I ++D+ ++G++
Sbjct: 643 EGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLD 702
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALH 289
+A + + M + + W T+++ +H
Sbjct: 703 RARRFVDEMPITANAMIWRTLLSACKVH 730
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N ++ YAK G + AR +F+ ++ ++ +SW +++GYAQ EA L+ +M V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P + + LSAC + G IH + + + + NALI +Y G A +V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F +M +T+ T+I+G A G G AL +F M+ + ++P+ +T ++L+AC VG +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G++ + + + G+ G ++DL + G ++ A + + N +W +L
Sbjct: 262 QKGKQLHSYLL-KAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLV 319
Query: 388 ASNIYGDV 395
A YG +
Sbjct: 320 A---YGQI 324
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-----IHNYI 236
+A + D P + ++L + + AL AC G W IH
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRG----NRWPLVLEIHATS 69
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
GL + N LID+YAK+G + +A QVF+ + ++ ++W M++G A GLG+EA
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAF 129
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID 355
++S+M V P ++LSAC L GR + + K + E + +I
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN--ALIA 187
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
L G + AE++ M F + + +L++ G GECALQ
Sbjct: 188 LYLGFGSFKLAERVFCDMLF-CDRVTFNTLISGHAQCGH---GECALQ 231
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 260/454 (57%), Gaps = 6/454 (1%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P+V +N + L ++ +AV+ ++ PD L AV + + +G +
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQ 177
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H V G D V ALI MY C + +VFDE S +VA N +VAG ++
Sbjct: 178 LHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSH--MDVASCNALVAGLSRN 235
Query: 158 GDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
++ A LF E NV+SWT+++A Q + EA+ LFR MQ E ++P+ + +
Sbjct: 236 AQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTI 295
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
L A A + A+ G H + + G + + + +AL+DMYAK G++ A +FE M
Sbjct: 296 PCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPY 355
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
++V++W MI G A+HG A+ +F M+ ++ KP+ +TF +L AC G E GR Y
Sbjct: 356 RNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSY 415
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
FN M+ ++GI P++E Y CM+ LLGRAG L +A ++ +MPFE + IWGSLL + ++G
Sbjct: 416 FNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHG 475
Query: 394 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
+V L E A ++L +LEP N+GNY +LSNIYA W+ ++R +M+ +G+KK GCS+I
Sbjct: 476 NVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWI 535
Query: 454 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
E+ +VH +AGD+SHP + + L + +M+
Sbjct: 536 EIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMR 569
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 46/371 (12%)
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N ++ + PD P LK+ S + L R +H G+ D V ++L+ Y
Sbjct: 12 NFLRHVSFPPDPRLLPSALKSC---SALRLARALHAAAAVAGVSRDAFVASSLLHAYLRF 68
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVISWTT 180
DAR V D + R V W+ ++A +A GD A L E M E NVI+W
Sbjct: 69 GATADARSVLDGMPHRT--VVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNG 126
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
L++G + + +A+ RM E PD + ALSA +G V +GE +H Y+ + G
Sbjct: 127 LVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAG 186
Query: 241 LNTIVPLNNALIDMYAKSGK-------------------------------IGKALQVFE 269
+ ALIDMY K G+ + +AL++F
Sbjct: 187 CRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFR 246
Query: 270 NMKNK----SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
+ +V++WT+++A +G EA+D+F M+ ++PN +T +L A ++
Sbjct: 247 EFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIA 306
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ GR + R G I ++D+ + G +++A + MP+ N W ++
Sbjct: 307 ALMHGRSA-HCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAM 364
Query: 386 LAASNIYGDVE 396
+ ++G+ E
Sbjct: 365 IGGYAMHGEAE 375
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 279/516 (54%), Gaps = 39/516 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNPL 58
++VRGL I S S G + + + +VYL+ TI A + + +P
Sbjct: 13 LLVRGLPLPARAAVSLIASSHSPGHARAVFDNAVPTACENVYLWTATIAAYARHASSSPS 72
Query: 59 ---NAVILYN-KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
A+ L+ ++ RP+ ++ V++ L + +G ++H V GL HV
Sbjct: 73 VAEGALTLFRLMLRHGVPRPNAFTASSVVRCCSALRAVRVGIQVHGFLVNAGLGRAEHVR 132
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AAL+ MY + + DAR+VFDE+S +V + NTMVA Y + GD+ + R +F+ M E++
Sbjct: 133 AALVDMYGNHGRVADARRVFDEMSAT--SVVLGNTMVACYVRAGDVESGRVVFDRMVERD 190
Query: 175 VISWTTL-------------------------------IAGYAQMDQPNEAITLFRRMQV 203
+ISW TL IA Y+Q +A+ +F RM++
Sbjct: 191 LISWNTLMMGYLRQGGAGVARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRL 250
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+PD M +SACAQLG++ + +H + + + + N+LIDMYAK G I +
Sbjct: 251 ARFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQ 310
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +F K +++ MI LA HG GR+AL +F M + R++P+ +T + +LSAC H
Sbjct: 311 AHLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDEMSKERLQPDAVTLLGVLSACAH 370
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV G+ YF MK+ Y IE + Y CM+DL GRAG ++EA +L R MP E +A +WG
Sbjct: 371 AGLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAGLIKEAYELARAMPMEPHAGVWG 430
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+L+ A + +VE+G+ A + LI +EP N G Y +L+N A +W + + MR G
Sbjct: 431 ALINACRKHCNVEVGKVAARELIAIEPRNPGTYVLLANTLARGQQWEFVETVWQSMRGKG 490
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
++K GCS++EV VHEF+ G++SHP+ D +Y IL
Sbjct: 491 IEKTAGCSWLEVENVVHEFLMGESSHPNSDEIYSIL 526
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 269/482 (55%), Gaps = 2/482 (0%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L+ N +++ +D G D A IF ++ LYNT + + + +
Sbjct: 271 LEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLG 330
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
++ RPD + + A +L + G+ H + GL+ +V A+I MY C
Sbjct: 331 EMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCG 390
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
A +VFD + L V+ WN+++AG+ + GD+ +A +F M + +++SW T+I
Sbjct: 391 KQEMACRVFDRM-LNKTRVS-WNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGAL 448
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
Q EAI LFR MQ E + D++ M+ SAC LGA++L +WIH YI++ ++ +
Sbjct: 449 VQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDM 508
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
L AL+DM+A+ G A+QVF M + V WT I +A+ G G A+++F M +
Sbjct: 509 HLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQ 568
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+KP+ + F+A+L+A H GLVE G F MK YGI P+ YGCM+DLLGRAG L E
Sbjct: 569 GIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSE 628
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A L+ M E N IWGSLLAA ++ +V++ A + + +L+P +G + +LSNIYA
Sbjct: 629 ALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYAS 688
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
GRW++ K+R +++ G KMPG S IE++ ++ EF GD SHP+ + +L +I +
Sbjct: 689 AGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCR 748
Query: 486 MK 487
++
Sbjct: 749 LR 750
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 43/400 (10%)
Query: 5 GLDQNNHLLSRFIDSCSSLG------FSDYAYSIFTHKSK--PDVYLYNTTIKALCQTDN 56
GL+ + L+ I SC+ +G ++ A +F + Y++++ I+
Sbjct: 60 GLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGL 119
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
A++++ ++ PDN++FPFVL A K + + G ++H V G + D+ V +
Sbjct: 120 GYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENS 179
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI Y C I R+VFD++S R NV W +++ GYAK G
Sbjct: 180 LIHFYGECGEIDCMRRVFDKMSER--NVVSWTSLIGGYAKRGCY---------------- 221
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
EA++LF M ++P+ + M+ +SACA+L ++LGE + I
Sbjct: 222 ---------------KEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCI 266
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ L + NAL+DMY K G I KA ++F+ +K+++ + T+++ GL RE L
Sbjct: 267 GELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVL 326
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+ M + +P+ IT ++ +SAC + V G ++ + R G+E +I++
Sbjct: 327 AVLGEMLKHGPRPDRITMLSAVSACSELDDVSCG-KWCHGYVLRNGLEGWDNVCNAIINM 385
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G + A ++ RM + + W SL+A GD+E
Sbjct: 386 YMKCGKQEMACRVFDRMLNKTRVS-WNSLIAGFVRNGDME 424
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 194/438 (44%), Gaps = 70/438 (15%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G +++ + + I G D +F S+ +V + + I + AV L+
Sbjct: 169 GFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLF 228
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYAS 123
++ +RP++ + V+ A KL ++LG ++ C +G L+ + +V AL+ MY
Sbjct: 229 FEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQV-CTCIGELELEVNALMVNALVDMYMK 287
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C I ARK+FDE +KN++ + T+++
Sbjct: 288 CGAIDKARKIFDEC---------------------------------VDKNLVLYNTIMS 314
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
Y + E + + M +PD I ML+A+SAC++L V G+W H Y+ + GL
Sbjct: 315 NYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEG 374
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG------------- 290
+ NA+I+MY K GK A +VF+ M NK+ ++W ++IAG +G
Sbjct: 375 WDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMP 434
Query: 291 ------------------LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+ +EA+++F M+ + +++T + + SAC ++G ++L +
Sbjct: 435 DSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKW 494
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAAS 389
+K + I + ++D+ R G Q A ++ +M A A G++
Sbjct: 495 IHGYIKKK-DIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEG 553
Query: 390 NIYGDVELGECALQHLIK 407
N G +EL + LQ IK
Sbjct: 554 NGTGAIELFDEMLQQGIK 571
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 274/471 (58%), Gaps = 14/471 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N LL + + +LG AY +F + DV +N+ I A +A+ L +K+
Sbjct: 113 NSLLGFYANCSENLG---SAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPE 169
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ N V+ + K +EL + Q L ++V ++I Y +
Sbjct: 170 RNIVTWNS----VVCGLSKAGNMELAHSVFEQM---PLRNEVSW-NSMISGYVRIGDVRA 221
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A+ +F ++ + V W M++GYA GDL +A +F M KNV+SW +I+GY
Sbjct: 222 AQSIFYQMPEKT--VVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNH 279
Query: 190 QPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
+ ++A+ +F M + +PD+ +++ LSACA LG++E G+WI++YI++ L+ +PL
Sbjct: 280 EFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLG 339
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
NALIDM+AK G + A +VF +M + +ITWTTM++GLA++G REA+++F +M K
Sbjct: 340 NALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTK 399
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P+++ FIA+LSAC H GLVE G+R F+ M +GI+P+IE YGCM+DLLGRAG L+EA +
Sbjct: 400 PDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVR 459
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
RM + NA IW +LL I+G+ +L + + ++ EP N ++SN+ A GR
Sbjct: 460 FTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGR 519
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
W + R MR ++K+PGCS I+V RVHEF+A DT H +Y+ L
Sbjct: 520 WEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRAL 570
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ ++ RM+ V+ + L A+E G IH I + G + V + N+L+
Sbjct: 57 EALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLL 116
Query: 253 DMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPN 310
YA S +G A +VFE M + VI+W +MI+ G + A+ + +M ER N
Sbjct: 117 GFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPER-----N 171
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+T+ +++ G +EL F M R + + MI R G ++ A+ +
Sbjct: 172 IVTWNSVVCGLSKAGNMELAHSVFEQMPLRNEV-----SWNSMISGYVRIGDVRAAQSIF 226
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+MP E W ++++ GD++ E H+
Sbjct: 227 YQMP-EKTVVSWTAMISGYATNGDLKSAENIFNHM 260
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 270/452 (59%), Gaps = 12/452 (2%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV----KLSTIELGREI 98
L+N + AL +PL + L P +++ F + +L+ L +
Sbjct: 52 LHNRLLHALAAARHPLLLPCFARAHRLRLLTPLSFTLLFSSPSSSTTTTRLAHALLSKSG 111
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + G D ++ +AL+ YA + ++R+VFDEL + A N +++ YA+ G
Sbjct: 112 HAASSG-----DPYLASALVASYARSGHLAESRRVFDELPPHS-DAAARNALLSAYARCG 165
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAAL 217
+++A +LF M ++NVISWT +++GYAQ + EA+ F M + V+P+E+ + + L
Sbjct: 166 RVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSSVL 225
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSV 276
ACA +GA+ LG + Y G+ T V + NAL++MYAK G I +A VF + K + +
Sbjct: 226 PACAAVGALALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQRDL 285
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+W +MI A+HGL RE L +F ++ KP+ ITF+ ++ AC H GLV+ G+ FN
Sbjct: 286 CSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNS 345
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
M+ +G++P+IE YGCM+DLLGRAG L+EA+ L+ MP E +A IWG+LL A + +G++E
Sbjct: 346 MREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNLE 405
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVS 456
L E A++ L++LEP N+ N ILSNIYA G+W+ ++ K++++ KK G S+IE+
Sbjct: 406 LAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHKKSAGYSFIELD 465
Query: 457 KRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
R+H+F+ D SHP ++ +Y L I MK
Sbjct: 466 GRMHKFLVEDKSHPIYEMVYDTLDSITLIMKL 497
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 269/500 (53%), Gaps = 44/500 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD-----YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPL 58
GL + ++R + C+ G YA +F P DV YNT ++ +
Sbjct: 57 GLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGGGG 116
Query: 59 NAVI----LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
++ ++ + PD Y+F +LKA E GR+ H V G +V
Sbjct: 117 GGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
LI MYA C GD+ AR +F+ M +
Sbjct: 177 PTLINMYAEC---------------------------------GDVRAARVMFDRMDGEC 203
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V+S+ +I + P EA+ LFR MQ + +KP + +++ LSACA LGA+ELG WIH+
Sbjct: 204 VVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHD 263
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
YI + L+++V +N ALIDMYAK G + A+ VF++M+++ W+ M+ A HG GRE
Sbjct: 264 YIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGRE 323
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ MF M++ +KP+++TF+ +L AC H G+V G +YF+ M+ YGI I+ YGC+
Sbjct: 324 AISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVT 382
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLL R+G L+ A K + +P + A +W +LL+A +GDV++G+ + +++L+ + G
Sbjct: 383 DLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGG 442
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
+Y I SN+ A GRW E +RK+M + GV K+PGCS IE+ VHEF AGD SHP
Sbjct: 443 DYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQE 502
Query: 475 LYQILCKINGQMKFAEHLQN 494
+++ ++ Q+K ++ N
Sbjct: 503 ARRMVDEVIEQLKLVGYVPN 522
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 254/466 (54%), Gaps = 33/466 (7%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F +V + I + + A+ + K+ L+PD++S VL A
Sbjct: 166 DDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAAC 225
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L G I +G+ +V V +L+ MY C
Sbjct: 226 ARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC---------------------- 263
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
G+L A +F M EK+++SW+T+I GYA P +A+ LF +MQ EN+
Sbjct: 264 -----------GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KPD M+ LSACA LGA++LG W + +++ + L ALIDMY+K G + +A +
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F MK K + W M+ GL+++G + +FS +E+ ++P+E TFI +L C H G
Sbjct: 373 IFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V GR++FN MK + + P IE YGCM+DLLGRAG L EA +L+ MP + NA +WG+LL
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
++ D L E L+ LI+LEP NSGNY LSNIY+ RW E+ KIR M++ ++K
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQK 552
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
+ CS+IE+ VHEF+ GD SH +++Y L ++ ++K H+
Sbjct: 553 IRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHV 598
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 205/389 (52%), Gaps = 37/389 (9%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
LDQ+N+LL+ + G ++Y+ +F+ +P+++L+NT I+ L D +A+ LY
Sbjct: 44 LDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYG 103
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
++ P+N++ PFVLKA + + LG +IH V G D DV V +L+ +Y C
Sbjct: 104 SMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD 163
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ ++A +F+ + +KNV+SWT +I GY
Sbjct: 164 ---------------------------------NFDDALKVFDDIPDKNVVSWTAIITGY 190
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
EAI F+++ +KPD +++ L+ACA+LG GEWI YI G+ V
Sbjct: 191 ISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV 250
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+ +L+DMY K G + +A +F M K +++W+TMI G A +GL ++ALD+F +M+
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSE 310
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+KP+ T + +LSAC +G ++LG ++M ++ + P + +ID+ + G +
Sbjct: 311 NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGT--ALIDMYSKCGSVT 368
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+A ++ M + + +W +++ ++ G
Sbjct: 369 QAWEIFTAMK-KKDRVVWNAMMVGLSMNG 396
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
G N ++ +F + E N+ W T+I G D ++AI L+ M+ P+ + L
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
ACA+ V LG IH+ + + G + V + +L+ +Y K AL+VF+++ +K+V+
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+WT +I G G REA+ F ++ +KP+ + + +L+AC +G G + +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWIDRY 240
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
S G+ + ++D+ + G L+ A + MP E + W +++ G L
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQGYAFNG---L 296
Query: 398 GECALQHLIKLEPHN 412
+ AL +++ N
Sbjct: 297 PQQALDLFFQMQSEN 311
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ +N + + +D G + A IF+ + D+ ++T I+ P A+ L+
Sbjct: 245 GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLF 304
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q+ L+PD Y+ VL A L ++LG S+ + ALI MY+ C
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC 364
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A ++F + + + VWN M+ G + G +A+A+F
Sbjct: 365 GSVTQAWEIFTAMKKK--DRVVWNAMMVGLSMNG---HAKAVF----------------- 402
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNT 243
+LF ++ ++PDE + L C G V G N +++ + L
Sbjct: 403 -----------SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
+ ++D+ ++G + +A Q+ NM K + + W ++ G LH
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 184/491 (37%), Positives = 271/491 (55%), Gaps = 53/491 (10%)
Query: 22 SLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTD--NPLNAVILYNK-IQASALRPDN 76
S FSD YA+ +F +++NT I+A C D A +LY K ++ PD
Sbjct: 93 SSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESSPDK 151
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++FPFVLKA + G+++HCQ V G DV+V LI +Y SC C+ ARKVFDE
Sbjct: 152 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 211
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R ++ WN+M+ + G+ ++ A+
Sbjct: 212 MPER--SLVSWNSMIDALVRFGEYDS-------------------------------ALQ 238
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTIVPLNNALID 253
LFR MQ + +PD M + LSACA LG++ LG W H ++ + + V + N+LI+
Sbjct: 239 LFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNE 311
MY K G + A QVF+ M+ + + +W MI G A HG EA++ F RM +R V+PN
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF+ +L AC H G V GR+YF++M Y IEP +E YGC++DL+ RAGY+ EA ++
Sbjct: 358 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 372 RMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHN-------SGNYAILSNIY 423
MP + +A IW SLL A G VEL E +++I + N SG Y +LS +Y
Sbjct: 418 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 477
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A RWN+ G +RK+M + G++K PGCS IE++ HEF AGDTSHP ++YQ L I+
Sbjct: 478 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 537
Query: 484 GQMKFAEHLQN 494
+++ +L +
Sbjct: 538 DRLRSIGYLPD 548
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 254/466 (54%), Gaps = 33/466 (7%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F +V + I + + A+ + K+ L+PD++S VL A
Sbjct: 166 DDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAAC 225
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L G I +G+ +V V +L+ MY C
Sbjct: 226 ARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC---------------------- 263
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
G+L A +F M EK+++SW+T+I GYA P +A+ LF +MQ EN+
Sbjct: 264 -----------GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KPD M+ LSACA LGA++LG W + +++ + L ALIDMY+K G + +A +
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F MK K + W M+ GL+++G + +FS +E+ ++P+E TFI +L C H G
Sbjct: 373 IFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V GR++FN MK + + P IE YGCM+DLLGRAG L EA +L+ MP + NA +WG+LL
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
++ D L E L+ LI+LEP NSGNY LSNIY+ RW E+ KIR M++ ++K
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQK 552
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
+ CS+IE+ VHEF+ GD SH +++Y L ++ ++K H+
Sbjct: 553 IRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHV 598
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 204/389 (52%), Gaps = 37/389 (9%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
LDQ+N+LL+ + G ++Y+ +F+ +P+++L+NT I+ L D +A+ LY
Sbjct: 44 LDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYG 103
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
++ P+N++ PFVLKA + + LG +IH V G D DV V +L+ +Y C
Sbjct: 104 SMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD 163
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ ++A +F+ + +KNV+SWT +I GY
Sbjct: 164 ---------------------------------NFDDALKVFDDIPDKNVVSWTAIITGY 190
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
EAI F+++ +KPD +++ L+ACA+LG GEWI YI G+ V
Sbjct: 191 ISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV 250
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+ +L+DMY K G + +A +F M K +++W+TMI G A +GL ++ALD+F +M+
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSE 310
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+KP+ T + +LSAC +G ++LG ++M ++ + P + +ID+ + G +
Sbjct: 311 NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGT--ALIDMYSKCGSVT 368
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+A ++ M + +W +++ ++ G
Sbjct: 369 QAWEIFTAMK-RKDRVVWNAMMVGLSMNG 396
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
G N ++ +F + E N+ W T+I G D ++AI L+ M+ P+ + L
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
ACA+ V LG IH+ + + G + V + +L+ +Y K AL+VF+++ +K+V+
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+WT +I G G REA+ F ++ +KP+ + + +L+AC +G G + +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWIDRY 240
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
S G+ + ++D+ + G L+ A + MP E + W +++ G L
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQGYAFNG---L 296
Query: 398 GECALQHLIKLEPHN 412
+ AL +++ N
Sbjct: 297 PQQALDLFFQMQSEN 311
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ +N + + +D G + A IF+ + D+ ++T I+ P A+ L+
Sbjct: 245 GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLF 304
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q+ L+PD Y+ VL A L ++LG S+ + ALI MY+ C
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC 364
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A ++F + + + VWN M+ G + G +A+A+F
Sbjct: 365 GSVTQAWEIFTAMKRK--DRVVWNAMMVGLSMNG---HAKAVF----------------- 402
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNT 243
+LF ++ ++PDE + L C G V G N +++ + L
Sbjct: 403 -----------SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
+ ++D+ ++G + +A Q+ NM K + + W ++ G LH
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 261/468 (55%), Gaps = 10/468 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA ++F+ S PD +L ++ T PL +++ ++ A + PF +
Sbjct: 90 YALNVFSAVSPPDPFLAAALLRFAFLTQPPLLPFRVFSHLR-RAHGAELPFLPFAFSTLA 148
Query: 88 KLSTIELG-----REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
K +T + G D V +LI Y +C + ARKVFDE+ +
Sbjct: 149 KSATASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEK-- 206
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V W ++V Y + GD+ +A +F K++++WT ++ GYAQ P +A+ +F RM
Sbjct: 207 DVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMA 266
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ DE+++ A+SACAQLGA+ W+ E+ G V + + L+DMYAK G I
Sbjct: 267 ELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLID 326
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSAC 321
+A +VF M+ K+V T+++MIAGLA HG EA+ +F M RA V+PN +TFI +L+AC
Sbjct: 327 EASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTAC 386
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H G+V GR YF MK +YGI P + Y CM+DLLGRAG + EA L+R M + +
Sbjct: 387 SHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGV 446
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
WG+LL A I+G E+ + +HL KLEP + GNY +LSNI A G+W E K+R +MR
Sbjct: 447 WGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRK 506
Query: 442 MGVKKMPGCSYIE-VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+KK P S E VH+F AGD +HP + + L ++ ++K
Sbjct: 507 QRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKL 554
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 168/438 (38%), Positives = 267/438 (60%), Gaps = 14/438 (3%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S GF++ A +F D+ + T I + + A+++Y + ++ L P +
Sbjct: 138 SKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRLMVSTGLGPSEVTMI 197
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD-ELSL 139
++ A + I G+++HC V T D V A +I Y++C I +A F E +
Sbjct: 198 DLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEA--CFQLEFGM 255
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ +VA N ++AG+ + ++ AR LF M E++V SW+T+I+GY Q DQP A+ LF
Sbjct: 256 KD-HVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALELFH 314
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN----ALIDMY 255
RM ++P+E+ M++ SA A LG ++ G W H Y+ N+I PLN+ ++IDMY
Sbjct: 315 RMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVH---YNSI-PLNDNLSASIIDMY 370
Query: 256 AKSGKIGKALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
AK G I AL+VF +++K +V W T+I GLA HG + +L+++S ++R +K + IT
Sbjct: 371 AKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDLQRRHIKLSAIT 430
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
FI +LSACCH GLV LG+ YF MKS+Y I+P I YGCM+DLLG+AG L+E E+L+R M
Sbjct: 431 FIGVLSACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVDLLGKAGRLEEVEELIRSM 490
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P +A+ IWG LL+A + ++ +GE A ++L KL+P + + +LSN+YA +GRW ++
Sbjct: 491 PMKADVVIWGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRILLSNLYADVGRWEDAF 550
Query: 434 KIRKVMRDMGVKKMPGCS 451
+R+VM+ + ++PG S
Sbjct: 551 LVRRVMQSHRMHRLPGYS 568
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 197/408 (48%), Gaps = 45/408 (11%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F + Y T I + D A+ +Y ++++ + P+ + V+ A
Sbjct: 12 DDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPNEVTMASVISAC 71
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
++ I R +H + D V V L+ MY + + +AR +FDE+ + NV
Sbjct: 72 CRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFDEMQEK--NVVS 129
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN M+ GY+K G N A+ +FE++ +K+++SW T+I GY ++++ EA+ ++R M +
Sbjct: 130 WNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRLMVSTGL 189
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIH-----------NYIE------------------ 237
P E+ M+ +SAC + A+ G+ +H ++++
Sbjct: 190 GPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACF 249
Query: 238 --QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++G+ V NALI + ++ I +A ++F M + V +W+TMI+G A
Sbjct: 250 QLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMA 309
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-----RYFNIMKSRYGIEPKIEQY 350
L++F RM + ++PNE+T +++ SA +G ++ GR ++N + + I
Sbjct: 310 LELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASI--- 366
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANA-AIWGSLLAASNIYGDVEL 397
ID+ + G + A ++ ++ +A+ + W +++ +G +L
Sbjct: 367 ---IDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKL 411
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 31/203 (15%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
M++GY K G+L++AR LFE+M +K +S+TT+I G+ + D EAI +++ M+ V P+
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
E+ M + +SAC ++G + +H + + + V ++ L++MY S +G+A +F+
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 270 NMKNKSVITWTTMIAGLALHGLG-------------------------------REALDM 298
M+ K+V++W M+ G + G REAL M
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMM 180
Query: 299 FSRMERARVKPNEITFIAILSAC 321
+ M + P+E+T I ++SAC
Sbjct: 181 YRLMVSTGLGPSEVTMIDLISAC 203
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
+I Y KSG + A ++FE M K +++TTMI G + EA+ ++ M V PN
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 311 EITFIAILSACCHVGLV 327
E+T +++SACC VG +
Sbjct: 61 EVTMASVISACCRVGRI 77
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 269/500 (53%), Gaps = 44/500 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSD-----YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPL 58
GL + ++R + C+ G YA +F P DV YNT ++ +
Sbjct: 57 GLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVIWYNTLLRGYARGGGGG 116
Query: 59 NAVI----LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
++ ++ + PD Y+F +LKA E GR+ H V G +V
Sbjct: 117 GGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
LI MYA C GD+ AR +F+ M +
Sbjct: 177 PTLINMYAEC---------------------------------GDVRAARVMFDRMDGEC 203
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
V+S+ +I + P EA+ LFR MQ + +KP + +++ LSACA LGA+ELG WIH+
Sbjct: 204 VVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHD 263
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
YI + L+++V +N ALIDMYAK G + A+ VF++M+++ W+ M+ A HG GRE
Sbjct: 264 YIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGRE 323
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ MF M++ +KP+++TF+ +L AC H G+V G +YF+ M+ YGI I+ YGC+
Sbjct: 324 AISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVT 382
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLL R+G L+ A K + +P + A +W +LL+A +GDV++G+ + +++L+ + G
Sbjct: 383 DLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGG 442
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
+Y I SN+ A GRW E +RK+M + GV K+PGCS IE+ VHEF AGD SHP
Sbjct: 443 DYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQE 502
Query: 475 LYQILCKINGQMKFAEHLQN 494
+++ ++ Q+K ++ N
Sbjct: 503 ARRMVDEVIEQLKLVGYVPN 522
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 274/498 (55%), Gaps = 38/498 (7%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L NN LL D S G + A +F + V + + I + +V L++
Sbjct: 286 LTLNNCLL----DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ + PD ++ +L A +E G+++H + SD+ V AL+ MYA C
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKC- 400
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
G + +A ++F M K+++SW T+I GY
Sbjct: 401 --------------------------------GSMGDAHSVFSEMQVKDIVSWNTMIGGY 428
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
++ PNEA+ LF MQ N KP+ I M L ACA L A+E G+ IH +I + G +
Sbjct: 429 SKNSLPNEALNLFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDR 487
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+ NAL+DMY K G +G A +F+ + K +++WT MIAG +HG G EA+ F+ M +
Sbjct: 488 HVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNS 547
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
++P+E++FI+IL AC H GL++ G +FN+M++ IEPK E Y C++DLL RAG L +
Sbjct: 548 GIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSK 607
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A K ++ MP E +A IWG+LL IY DV+L E +H+ +LEP N+G Y +L+NIYA
Sbjct: 608 AYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAE 667
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
+W E K+R+ + G++K PGCS+IE+ +VH FV GD+SHP +++ +L K +
Sbjct: 668 AEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTR 727
Query: 486 MKFAEHLQNEFSGVLESD 503
MK H ++++D
Sbjct: 728 MKEEGHFPKMRYALIKAD 745
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 207/427 (48%), Gaps = 31/427 (7%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S SC+++G S K + YN I C+ N A+ L N+ L
Sbjct: 45 SNLYHSCATIGTSVLPSETIDCK----ITDYNIEICRFCELGNLRRAMELINQSPKPDLE 100
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
Y VL+ L +I+ GR IH ++ D + + L+ MY +C + + R++
Sbjct: 101 LRTYCS--VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGD------------------LNNARALFELMTEKNV 175
FD+++ V +WN ++ GYAK+G+ + +AR LF+ + +++V
Sbjct: 159 FDKVANE--KVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDV 216
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISW ++I+GY + + LF +M + + D M++ ++ C+ G + LG +H Y
Sbjct: 217 ISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGY 276
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + LNN L+DMY+KSG + A+QVFE M +SV++WT+MIAG A GL +
Sbjct: 277 AIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMS 336
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F ME+ + P+ T IL AC GL+E G+ N +K ++ + ++D
Sbjct: 337 VRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKEN-KMQSDLFVSNALMD 395
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+ + G + +A + M + + W +++ Y L AL ++++ ++ N
Sbjct: 396 MYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG---YSKNSLPNEALNLFVEMQYNSKPN 451
Query: 416 YAILSNI 422
++ I
Sbjct: 452 SITMACI 458
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 294/517 (56%), Gaps = 69/517 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +GL+Q++ ++S F+ +S+ Y+ SIF P +LYN +K + ++
Sbjct: 32 IIHKGLEQDHFIISHFLSISTSVS---YSTSIFNRLLNPSTFLYNILLKIFSKNSQFIDT 88
Query: 61 VILYNKIQASALR-PDNYSFPFVLKAV-----VKLSTIELGREIHCQT-----VGTGLDS 109
L+ +++ S D Y++P ++K +K I G I C VG+ L S
Sbjct: 89 FSLFYRMKQSEYALSDKYTYPLLIKVCSNELRLKEGEIVHGSAIRCGVSDDVYVGSSLIS 148
Query: 110 -------------------DVHVVA--ALIQMYAS------CKCIYD------------- 129
+ +VV+ A++ YAS K +++
Sbjct: 149 FYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPERNLPSWNAM 208
Query: 130 ------------ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
ARKVFDE+ R NV + M+ GYAKVGD+ +ARALF+ EK+V++
Sbjct: 209 ISGLGKAGDLSGARKVFDEMVER--NVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVA 266
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W+ LI+GY++ +QPNEA+ +F M NVKPDE M++ +SAC+QLG +L +W+ +Y+
Sbjct: 267 WSALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLS 326
Query: 238 QYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
Q ++T + ALIDM+AK G + KA+++F++M ++ +I ++I GL++HG G EA+
Sbjct: 327 QTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAV 386
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++F+RM + P+ + F IL+AC GL+E G +F+ MK++Y + P Y CM+DL
Sbjct: 387 ELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDL 446
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
L RAG L+ A LL+ MP + +A WG+LL A ++GDVEL E L++LEP +G+Y
Sbjct: 447 LSRAGQLRAAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEVANRLLELEPEKAGSY 506
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
+LSNIYA +W + +R M++ G++K+PGCSYI
Sbjct: 507 VLLSNIYASANQWLDVSIVRDEMKERGIRKIPGCSYI 543
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/484 (37%), Positives = 268/484 (55%), Gaps = 53/484 (10%)
Query: 22 SLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTD--NPLNAVILYNK-IQASALRPDN 76
S FSD YA+ +F +++NT I+A C D A +LY K ++ PD
Sbjct: 84 SSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESSPDK 142
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++FPFVLKA + G+++HCQ V G DV+V LI +Y SC C+ ARKVFDE
Sbjct: 143 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 202
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R ++ WN+M+ + G+ ++ A+
Sbjct: 203 MPER--SLVSWNSMIDALVRFGEYDS-------------------------------ALQ 229
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTIVPLNNALID 253
LFR MQ + +PD M + LSACA LG++ LG W H ++ + + V + N+LI+
Sbjct: 230 LFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 288
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNE 311
MY K G + A QVF+ M+ + + +W MI G A HG EA++ F RM +R V+PN
Sbjct: 289 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 348
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF+ +L AC H G V GR+YF++M Y IEP +E YGC++DL+ RAGY+ EA ++
Sbjct: 349 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 408
Query: 372 RMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHN-------SGNYAILSNIY 423
MP + +A IW SLL A G VEL E +++I + N SG Y +LS +Y
Sbjct: 409 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 468
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A RWN+ G +RK+M + G++K PGCS IE++ HEF AGDTSHP ++YQ L I+
Sbjct: 469 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 528
Query: 484 GQMK 487
+++
Sbjct: 529 DRLR 532
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 257/463 (55%), Gaps = 47/463 (10%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA+ +F KP V+LYN I+A LY ++ P+ +SF F+ A
Sbjct: 34 YAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACA 93
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
LS+ + GR +H V +G DV + AL+ MYA + ARK FDE+++R +V W
Sbjct: 94 SLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVR--DVPTW 151
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-V 206
N+M+AGYA+ GDL A LF LM +NV SWT +I+GYAQ Q +A+++F M+ E +
Sbjct: 152 NSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
+P+E+ + + L ACA LGA+E+GE I Y G + ++NAL++MYA+ G+I KA
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 267 VFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VFE + + ++ +W +MI GLA+HG EA+++F +M R P+++TF+ +L AC H G
Sbjct: 272 VFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+V G+ +F M+ + I PK+E YGCM+DLLG
Sbjct: 332 MVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGPGA------------------------ 367
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L +LEP N GNY ILSNIYA GRW+ ++RK+M+ +
Sbjct: 368 -------------------LFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKIT 408
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
K G S+IE +H+F+ D SH D +Y +L +++ +MK
Sbjct: 409 KAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKL 451
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++ ++ + A LF+ + + V + LI Y+ ++ +L+ +M ++ P+
Sbjct: 22 LIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPN 81
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK------------ 257
E + SACA L + + G +H + + G V AL+DMYAK
Sbjct: 82 EHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFD 141
Query: 258 -------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G + AL++F M ++V +WT MI+G A +G +AL M
Sbjct: 142 EMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSM 201
Query: 299 FSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F M E ++PNE+T ++L AC ++G +E+G R + G + ++++
Sbjct: 202 FLMMEEETEMRPNEVTLASVLPACANLGALEVGER-IEVYARGNGYFKNLYVSNALLEMY 260
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
R G + +A + + N W S++ ++G
Sbjct: 261 ARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHG 296
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I+ Y L + LI + I A ++F+ + +V + +I + HG +
Sbjct: 7 IQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQC 66
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 354
++++M PNE +F + SAC + + GR + + +KS +G + + ++
Sbjct: 67 FSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCD--VFALTALV 124
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP-HNS 413
D+ + G L A K M + W S++A GD+ E AL+ L +L P N
Sbjct: 125 DMYAKLGLLSLARKQFDEMTVR-DVPTWNSMIAGYARCGDL---EGALE-LFRLMPARNV 179
Query: 414 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKK---------MPGCS---YIEVSKRVHE 461
++ + + YA G++ ++ + +M + + +P C+ +EV +R+
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 462 FVAGD 466
+ G+
Sbjct: 240 YARGN 244
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 280/495 (56%), Gaps = 29/495 (5%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN- 59
+I GL + LS I S YA+ IF + S P ++LYNT I +L N
Sbjct: 172 IITTGLSFQTYCLSHLIKISSKFNLP-YAFKIFNYISNPTIFLYNTLISSLINQTNQNQI 230
Query: 60 --AVILYNKIQASA-LRPDNYSFPFVLKAVVK-LSTIELGREIHCQTVG-TGLDSDVHVV 114
A LYNKI + L+P++++FP + KA S G +H + D V
Sbjct: 231 HLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQ 290
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
A+L+ YA + +R +FD ++ ++A WN ++ YA+ ++ F+
Sbjct: 291 ASLLNFYAKYGKMCVSRYIFDRINEP--DLATWNVILNAYARSSSYHSYSNSFD------ 342
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
D E++ LFR MQV ++P+E+ ++A +SAC+ LGAV G W+H
Sbjct: 343 ------------DADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHC 390
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM--KNKSVITWTTMIAGLALHGLG 292
++ + + + A +DMY+K G + A QVF+ M ++ +T MI G A+HG G
Sbjct: 391 FVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYG 450
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
+AL+++ +M+ + P+ TF+ + AC HVGLVE G F MK +G+EPK+E YGC
Sbjct: 451 NQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGC 510
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
+IDLLGRAG L+EAE+ L MP + NA +W SLL A+ I+G++ +GE AL LI+LEP
Sbjct: 511 LIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPET 570
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
SGNY +LSN+YA +GR N+ ++RK+M+ GV K+PG S +E+ +HEF+ GD SHP
Sbjct: 571 SGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFS 630
Query: 473 DRLYQILCKINGQMK 487
+Y + +IN +++
Sbjct: 631 KEIYLKIAEINSRLE 645
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 140/324 (43%), Gaps = 56/324 (17%)
Query: 72 LRPDNYSF--PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
++P N+ F P + K + ++IH Q + TGL + ++ LI++ + Y
Sbjct: 140 MKPKNHIFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKISSKFNLPY- 198
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A K+F+ +S + ++NT+++ L+ + N +
Sbjct: 199 AFKIFNYISNPT--IFLYNTLISS---------------LINQTN-------------QN 228
Query: 190 QPNEAITLFRRMQV-ENVKPDEIAMLAALSA-CAQLGAVELGEWIHNYIEQYGLNTIVPL 247
Q + A +L+ ++ +N++P+ + A C+ G +H ++ ++ P
Sbjct: 229 QIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKF---LQPPF 285
Query: 248 NN----ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH-------------G 290
+N +L++ YAK GK+ + +F+ + + TW ++ A
Sbjct: 286 DNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDAD 345
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
E+L +F M+ ++PNE+T +A++SAC ++G V G + + R I+
Sbjct: 346 FSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQG-FWVHCFVLRNKIKMNRFVG 404
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMP 374
+D+ + G L A ++ +MP
Sbjct: 405 TAFVDMYSKCGCLNLACQVFDKMP 428
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 240/377 (63%), Gaps = 4/377 (1%)
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
+ D+ + ++ Y + +AR +FD++ R +V WNT++ GYA +GD+ +F
Sbjct: 84 ERDIVLWNTMVAGYIEMGNMMEARSLFDQMPCR--DVMSWNTVLEGYANIGDMEACERVF 141
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAV 226
+ M E+NV SW LI GYAQ + +E + F+RM E +V P++ + LSACA+LGA
Sbjct: 142 DEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGAF 201
Query: 227 ELGEWIHNYIEQYGLNTI-VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ G+ +H Y E G N + V + NALIDMY K G I A++VF+ +K + +I+W TMI G
Sbjct: 202 DFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 261
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
LA HG G EALD+F M+ + P+++TF+ +L AC H+GLVE G YFN M + + I P
Sbjct: 262 LAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITP 321
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+IE GC++DLL RAG+L +A + + +MP +A+A IW +LL AS +Y V+ GE AL+ L
Sbjct: 322 QIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDTGELALKEL 381
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
IKLEP N N+ +LSNIY GR++++ +++ MRD G KK G S+IE + +F +
Sbjct: 382 IKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGISWIETDDGLVKFYSS 441
Query: 466 DTSHPDFDRLYQILCKI 482
HP + L +IL ++
Sbjct: 442 GEKHPRTEELQRILGEL 458
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 42/253 (16%)
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
++ + + A KVF E+ + NV +W +M+ GY DL +AR F+L E++++ W
Sbjct: 34 LFGTLCSMVSANKVFCEMVEK--NVVIWTSMINGYLLNKDLVSARRYFDLSPERDIVLWN 91
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
T++AGY +M EA +LF +M +V W
Sbjct: 92 TMVAGYIEMGNMMEARSLFDQMPCRDVMS----------------------W-------- 121
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
N +++ YA G + +VF+ M ++V +W +I G A +G E L F
Sbjct: 122 ---------NTVLEGYANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSF 172
Query: 300 SRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
RM + V PN+ T +LSAC +G + G+R ++ + + +ID+ G
Sbjct: 173 KRMVDEGSVFPNDATLTLVLSACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYG 232
Query: 359 RAGYLQEAEKLLR 371
+ G ++ A ++ +
Sbjct: 233 KCGAIEIAMEVFK 245
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 275/529 (51%), Gaps = 65/529 (12%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA SIF + + +NT IK + + ++L++++ L PDN++ P V+K
Sbjct: 65 YARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCA 123
Query: 88 KLSTIELGREIHCQTVGTG-------------------------------LDSDVHVVAA 116
+L ++ G++IH + G +D DV + +
Sbjct: 124 RLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNS 183
Query: 117 LIQMYASC-----------------------------KC--IYDARKVFDELSLRVWNVA 145
LI YA C KC + ARK+FD++ R N+
Sbjct: 184 LIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCR--NLV 241
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WN M+ GY K GD ++A LF M ++++W +IAGY Q +A+ +F M
Sbjct: 242 SWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 301
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+P +++ LSA + L + G WIH+Y+E+ G L +LI+MYAK G I AL
Sbjct: 302 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESAL 361
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VF ++ K V WT +I GL +HG+ AL +F M + +KPN I FI +L+AC H G
Sbjct: 362 TVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAG 421
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
LV+ GR+YF++M + Y IEP +E YGC++D+L RAG+L+EA+ + MP N IW SL
Sbjct: 422 LVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSL 481
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L S +G +++GE A Q +I++ P G Y +LSN+YA G W + +R++M G +
Sbjct: 482 LGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFR 541
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
K PGCS +E +HEF+ GD SHP +Y + ++ ++K H+ +
Sbjct: 542 KDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPD 590
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 17/283 (6%)
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
K+ DL AR++F+ + +++I W T+I Y + ++ I LF + V PD +
Sbjct: 59 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPC 117
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
+ CA+LG V+ G+ IH + G + V + +L++MY+K G+I A +VF+ M +K
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V+ W ++I G A G AL +F M + + ++ ++ G VE R+ F+
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFD 233
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
M R + + MI+ ++G A +L +MP + W ++A + G
Sbjct: 234 QMPCR-----NLVSWNAMINGYMKSGDFDSALELFYQMPI-WDLVTWNLMIAGYELNGQF 287
Query: 396 ELGECALQHLIKL--EPHNSGNYAILSNI--YAIL--GRWNES 432
++KL P ++ ++LS + A+L GRW S
Sbjct: 288 MDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHS 330
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 119/292 (40%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M R L N +++ ++ S G D A +F D+ +N I ++A
Sbjct: 235 MPCRNLVSWNAMINGYMKS----GDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDA 290
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V ++ + RP + + VL AV L+ + GR IH G + D + +LI+M
Sbjct: 291 VKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEM 350
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C CI A VF + + V W ++ G
Sbjct: 351 YAKCGCIESALTVFRAIQKK--KVGHWTAIIVGLG------------------------- 383
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
I G A N A+ LF M +KP+ I + L+AC G V+ G ++ + +Y
Sbjct: 384 -IHGMA-----NHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEY 437
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ + L+D+ ++G + +A ENM + + + W +++ G HG
Sbjct: 438 KIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/480 (36%), Positives = 277/480 (57%), Gaps = 45/480 (9%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
S S LG +A ++F S D ++ NT I+A T PL A+++YN++Q + D+++
Sbjct: 42 SLSPLGSLPHACALFQETSMDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFT 101
Query: 79 FPFVLKAVVK-LSTIEL-------------GREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ FVL+A + + E+ G EIH + + G D D HV +L+ +Y+
Sbjct: 102 YNFVLRACARAIKCTEMDDQCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGS 161
Query: 125 KCIYDARKVFDELSLRV---WNVAV--------------------------WNTMVAGYA 155
+ AR +F+E++++ WN+ + WNT++A Y
Sbjct: 162 GLVGFARLIFNEMTVKTAVSWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYI 221
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
++ +L AR +FE M E++V+SW ++I+GY + A+ LF M+ N++ E+ ++
Sbjct: 222 RLNNLVAARKVFEEMPERDVVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFIS 281
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L ACA+LGA+E+G+ IH+ +++ L NA++DMYAK G++G AL+VF M+ K
Sbjct: 282 ILGACAELGALEIGKKIHDSLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKP 341
Query: 276 VITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVGLVELGRRY 333
V W MI GLA+HG AL+MF M E KPN ITFIA+L AC H GL+ GR +
Sbjct: 342 VSCWNAMIMGLAVHGHCERALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHF 401
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
F++M ++Y I P ++ YGCMIDLL R G+L+EA +++ PF + + +W +LL ++
Sbjct: 402 FSLMVTKYKIMPDLKHYGCMIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHR 461
Query: 394 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
VELGE + + L +LEP G+Y +LSNIYA RW++ ++RK M + GV K G S++
Sbjct: 462 HVELGEESFRKLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMINYGVCKKAGSSHV 521
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 268/476 (56%), Gaps = 6/476 (1%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G A +F S+ + +N+ I + AV+++ ++Q L PD ++ +L
Sbjct: 183 GLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLL 242
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
K +LGR +H V TG++ D V AL+ MYA C + A+ VFD++ + +
Sbjct: 243 SVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDK--D 300
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V W M+ YA G ++ A F M KNV+SW ++I + Q EA+ LF RM
Sbjct: 301 VVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCD 360
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
V ++ ++A LS+C+ +G + LG+ H+YI + L NA+IDMYAK G +
Sbjct: 361 SGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQT 420
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A+ VF M K+ ++W +I LALHG G+EA++MF +M+ + V P+EITF +LSAC H
Sbjct: 421 AMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSH 480
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV+ G+ YF IM +GI P +E Y CM+DLLGR G L EA L+++MP + + +W
Sbjct: 481 SGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWS 540
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A YG++ +G+ ++ L++L +NSG Y +LSN+Y+ RW++ I K++ G
Sbjct: 541 ALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNG 600
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA----EHLQNE 495
+KK S+IE+ ++F+ D H +Y +L ++ +K A +HL E
Sbjct: 601 IKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHLKSAGYPCKHLDVE 656
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 201/424 (47%), Gaps = 66/424 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ GL L + + S L YA+ +F +P+ +++N IK + +P+ +
Sbjct: 59 IILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKS 118
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++LY ++ + P+ ++ PFVLKA S LG +H Q+ G+ S V A++ +
Sbjct: 119 LLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNI 178
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y +C I AR+VFD++S R + WN+M+ GY+K+G
Sbjct: 179 YVACGLITSARRVFDDISER--TLVSWNSMINGYSKMG---------------------- 214
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+ EA+ +FR MQ ++PD ++ LS + G +LG ++H ++ G
Sbjct: 215 ---------RSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTG 265
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL--------- 291
+ + NAL+DMYAK G + A VF+ M +K V++WT MI A HGL
Sbjct: 266 IEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFN 325
Query: 292 ---GR-------------------EALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
G+ EA+D+F RM + V N+ T +AILS+C H+G + L
Sbjct: 326 QMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLAL 385
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G++ + + I +ID+ + G LQ A + MP E NA W ++ A
Sbjct: 386 GKQAHSYIFDN-NITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWNVIIGAL 443
Query: 390 NIYG 393
++G
Sbjct: 444 ALHG 447
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 157/325 (48%), Gaps = 16/325 (4%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+V+ ++ DL A LF+ + + N + LI GY+ P +++ L+RRM + + P+
Sbjct: 74 LVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPN 133
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ + L ACA LG +H + G+ + + NA++++Y G I A +VF+
Sbjct: 134 QFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFD 193
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
++ +++++W +MI G + G EA+ MF M+ ++P+ T + +LS G +L
Sbjct: 194 DISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDL 253
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G R+ ++ GIE ++D+ + G L+ A+ + +M + + W ++
Sbjct: 254 G-RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM-LDKDVVSWTCMI--- 308
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--- 446
N Y + L +CAL+ ++ N ++ + + G + E+ + M D GV
Sbjct: 309 NAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDT 368
Query: 447 -----MPGCSY---IEVSKRVHEFV 463
+ CS+ + + K+ H ++
Sbjct: 369 TLVAILSSCSHMGDLALGKQAHSYI 393
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 2/162 (1%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + ID + G A +F + + +N I AL A+ ++ K+QAS
Sbjct: 404 LCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASG 463
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
+ PD +F +L A ++ G+ + G+ DV A ++ + + +A
Sbjct: 464 VCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEA 523
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
+ ++ ++ +V VW+ ++ G+L + + + + E
Sbjct: 524 ISLIKKMPVKP-DVVVWSALLGACRTYGNLAIGKQIMKQLLE 564
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 268/462 (58%), Gaps = 17/462 (3%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F + D++ +N + + + A L+ ++ D S+ +L
Sbjct: 12 DLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER----DIVSWNAMLSGY 67
Query: 87 VKLSTIELGREI-HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ ++ REI + + G+ + L+ Y I DA+++F+ S W +
Sbjct: 68 AQNGFVDEAREIFYKMPLKNGISWN-----GLLAAYVQNGRIEDAKRLFE--SKMDWTLV 120
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WN ++ G+ + R LF+ M +++ ISW+ +IAGY+Q EA+ F MQ +
Sbjct: 121 SWNCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDC 175
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+ + + ALS C+ + A+ELG +H + + G T + NAL+ MY K G I +A
Sbjct: 176 ERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEAR 235
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
F+ + K V++W TMI G A HG G EAL +F M+ ++P++ T +++L+AC H G
Sbjct: 236 DAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
LV+ G YF M YGI K+ Y CM+DLLGRAG L+EA+ L++ MPFE +AA WG+L
Sbjct: 296 LVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGAL 355
Query: 386 LAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVK 445
L AS I+G+ ELGE A Q + ++EPHNSG Y +LS +YA GRW+++GK+R MR+ GVK
Sbjct: 356 LGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVK 415
Query: 446 KMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K+PG S++EV ++H F GDTSHP D++Y L +++ ++K
Sbjct: 416 KVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLK 457
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 38/290 (13%)
Query: 19 SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYS 78
+C GF ++F + + D ++ I Q A+ + ++Q R + S
Sbjct: 123 NCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSS 182
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
F L ++ +ELGR++HC+ V G + +V AL+ MY C I +AR F E+
Sbjct: 183 FTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEIL 242
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
+ +V WNTM+ GYA+ G+ + EA+T+F
Sbjct: 243 EK--DVVSWNTMIHGYAR--------------------------HGFGE-----EALTVF 269
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAK 257
M+ ++PD+ M++ L+AC+ G V+ G E+ ++ YG+ + ++D+ +
Sbjct: 270 ELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGR 329
Query: 258 SGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
+G++ +A + +NM TW ++ +HG LG +A + ME
Sbjct: 330 AGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEME 379
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
M++GY + + AR LF+ M E+++ SW ++ GY + A LF RM ++
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI--- 57
Query: 210 EIAMLAALSACAQLGAV-ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++ A LS AQ G V E E + + G++ N L+ Y ++G+I A ++F
Sbjct: 58 -VSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISW-----NGLLAAYVQNGRIEDAKRLF 111
Query: 269 E--------------------------NMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
E NM + I+W+ MIAG + +G EAL F M
Sbjct: 112 ESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEM 171
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
+R + N +F LS C ++ +ELGR+ + ++K+ Y + ++ + + G
Sbjct: 172 QRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGN--ALLAMYCKCG 229
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+ EA + + E + W +++ A + +G+ L L + P ++ ++L
Sbjct: 230 SIDEARDAFQEI-LEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVL 288
Query: 420 S 420
+
Sbjct: 289 A 289
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 257/464 (55%), Gaps = 34/464 (7%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
F D A +F S DV +NT I+ + A ++++ + PD ++ VL
Sbjct: 280 AFKD-AREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + + G+EIH + GL SDV ALI MY+
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYS--------------------- 377
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
K G + +AR +F+ M +++V+SWTTL+ YA DQ E+ T F++M
Sbjct: 378 ------------KAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ 425
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ VK ++I + L AC+ A++ G+ IH + + GL + + NAL+ MY K G +
Sbjct: 426 QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVED 485
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A++VFE M + V+TW T+I GL +G G EAL + M+ ++PN TF+ +LSAC
Sbjct: 486 AIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRV 545
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
LVE GRR F M YGI P + Y CM+D+L RAG+L+EAE ++ +P + +AA+WG
Sbjct: 546 CNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWG 605
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LLAA I+ +VE+GE A +H +KLEP N+G Y LS IYA G W + K+RK M++ G
Sbjct: 606 ALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERG 665
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
VKK PG S+IE++ VH FVA D SHP +Y L + QMK
Sbjct: 666 VKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMK 709
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 172/383 (44%), Gaps = 35/383 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N ++ + + + G + A +F S V +N I A L+
Sbjct: 58 GVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLF 117
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q L PD ++F +L A + + GREIH + + GL +D V ALI MY
Sbjct: 118 TLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMY--- 174
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
AK G + +AR +F+ M ++ +SWTTL
Sbjct: 175 ------------------------------AKCGSVRDARRVFDAMASRDEVSWTTLTGA 204
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YA+ E++ + M E V+P I + LSAC L A+E G+ IH +I + ++
Sbjct: 205 YAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSD 264
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V ++ AL MY K G A +VFE + + VI W TMI G G EA F RM
Sbjct: 265 VRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLE 324
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
V P+ T+ +LSAC G + G+ + ++ G+ + +I++ +AG ++
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKE-IHARAAKDGLVSDVRFGNALINMYSKAGSMK 383
Query: 365 EAEKLLRRMPFEANAAIWGSLLA 387
+A ++ RMP + + W +LL
Sbjct: 384 DARQVFDRMP-KRDVVSWTTLLG 405
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 170/349 (48%), Gaps = 39/349 (11%)
Query: 75 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134
D+Y + +L++ VK + +G+++H + G+ +V++
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYIT-------------------- 66
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
NT++ YA G +N AR LF+ + K+V+SW +I+GYA EA
Sbjct: 67 -------------NTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEA 113
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
LF MQ E ++PD+ ++ LSAC+ + G IH + + GL + NALI M
Sbjct: 114 FNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISM 173
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
YAK G + A +VF+ M ++ ++WTT+ A G G E+L + M + RV+P+ IT+
Sbjct: 174 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITY 233
Query: 315 IAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ +LSAC + +E G++ + +I++S Y + ++ + + + G ++A ++ +
Sbjct: 234 MNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST--ALTKMYMKCGAFKDAREVFECL 291
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIK--LEPHNSGNYAILS 420
+ + W +++ G +E +++ + P + +LS
Sbjct: 292 SYR-DVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLS 339
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 175/385 (45%), Gaps = 37/385 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL + + + I + G A +F + D + T A ++ ++ Y
Sbjct: 159 GLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTY 218
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ + +RP ++ VL A L+ +E G++IH V + SDV V AL +MY C
Sbjct: 219 HAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC 278
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G +AR +FE ++ ++VI+W T+I G
Sbjct: 279 ---------------------------------GAFKDAREVFECLSYRDVIAWNTMIRG 305
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+ Q EA F RM E V PD LSACA+ G + G+ IH + GL +
Sbjct: 306 FVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSD 365
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V NALI+MY+K+G + A QVF+ M + V++WTT++ A E+ F +M +
Sbjct: 366 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ 425
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
VK N+IT++ +L AC + ++ G+ + ++K+ G+ + ++ + + G +
Sbjct: 426 QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKA--GLLADLAVTNALMSMYFKCGSV 483
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAA 388
++A ++ M + W +L+
Sbjct: 484 EDAIRVFEGMSMR-DVVTWNTLIGG 507
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL + + I+ S G A +F K DV + T + D + + +
Sbjct: 361 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTF 420
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ ++ + ++ VLKA ++ G+EIH + V GL +D+ V AL+ MY C
Sbjct: 421 KQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKC 480
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA +VF+ +S+R +V WNT++ G + N R L
Sbjct: 481 GSVEDAIRVFEGMSMR--DVVTWNTLIGGLGQ-----NGRGL------------------ 515
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNT 243
EA+ + M+ E ++P+ + LSAC VE G ++ + YG+
Sbjct: 516 --------EALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVP 567
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
++D+ A++G + +A V + K S W ++A +H
Sbjct: 568 TEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIH 614
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 262/465 (56%), Gaps = 6/465 (1%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A ++ V +N I L A+ ++ K+ ++ D +++ VL A
Sbjct: 242 DAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSAC 301
Query: 87 VKLSTIELGREIHCQTVGT----GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
G+++H + T LD + V AL +Y C + +AR+VF+++ ++
Sbjct: 302 ANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-- 359
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ WN +++GY G ++ A++ FE M E+N+++WT +I+G AQ E++ LF RM+
Sbjct: 360 DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMK 419
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E +P + A A+ ACA L A+ G +H + + G ++ + NALI MYAK G +
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVE 479
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A +F M ++W MIA L HG G +AL++F M + + P+ ITF+ +LS C
Sbjct: 480 AAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCS 539
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLVE G RYF M YGI P + Y MIDLL RAG EA+ ++ MP E IW
Sbjct: 540 HAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIW 599
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
+LLA I+G+++LG A + L +L P + G Y +LSN+YA +GRW++ K+RK+MRD
Sbjct: 600 EALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDK 659
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
GVKK PGCS+IEV +VH F+ D HP+ +Y L ++ +M+
Sbjct: 660 GVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMR 704
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 51/427 (11%)
Query: 14 SRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+ I + SS G S+ A IF T D YN I ++ A+ L+ + +
Sbjct: 85 TTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNG 144
Query: 72 LRPDNYSFPFVLKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASCKC---- 126
RPDN++F VL A+ + E ++IHC V +G V+ AL+ ++ C
Sbjct: 145 FRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLV 204
Query: 127 -----IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ ARK+FDE++ R + W TM+AGY + G+L+ AR + MTEK V++W +
Sbjct: 205 SSSSLMAAARKLFDEMTER--DELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAM 262
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI----E 237
I+GY EA+ +FR+M + ++ DE + LSACA G G+ +H YI
Sbjct: 263 ISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEP 322
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQV------------------------------ 267
+ L+ + +NNAL +Y K GK+ +A QV
Sbjct: 323 RPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKS 382
Query: 268 -FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
FE M ++++TWT MI+GLA +G G E+L +F+RM+ +P + F + AC +
Sbjct: 383 FFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAA 442
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ GR+ + R G + + +I + + G ++ A L MP+ ++ W +++
Sbjct: 443 LMHGRQ-LHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMI 500
Query: 387 AASNIYG 393
AA +G
Sbjct: 501 AALGQHG 507
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 128/295 (43%), Gaps = 45/295 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M V+ L N +LS ++++ G D A S F + ++ + I L Q +
Sbjct: 356 MPVKDLVSWNAILSGYVNA----GRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEES 411
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+N++++ P +Y+F + A L+ + GR++H Q V G DS + ALI M
Sbjct: 412 LKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITM 471
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A +F L++ + WN M+A + G A LFELM +++++
Sbjct: 472 YAKCGVVEAAHCLF--LTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDIL---- 525
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY- 239
PD I L LS C+ G VE G H Y +
Sbjct: 526 ---------------------------PDRITFLTVLSTCSHAGLVEEG---HRYFKSMS 555
Query: 240 GLNTIVPLNN---ALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
GL I P + +ID+ ++GK +A + E M W ++AG +HG
Sbjct: 556 GLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHG 610
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 147/344 (42%), Gaps = 49/344 (14%)
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
+ + R +H + +G +++ LI +Y + A +FDE +R ++ T+
Sbjct: 30 SYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDE--IRQPDIVARTTL 87
Query: 151 VAGYAKVGDLNNARALF--ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+A ++ G+ N AR +F + ++ + + +I GY+ + AI LFR + +P
Sbjct: 88 IAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRP 147
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDM------------- 254
D + L A A + E + IH + + G + + NAL+ +
Sbjct: 148 DNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSS 207
Query: 255 ---------------------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
Y ++G++ A Q + M K V+ W MI+G
Sbjct: 208 SLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYV 267
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR---YFNIMKSRYGIE 344
HG EAL+MF +M ++ +E T+ ++LSAC + G G++ Y + R ++
Sbjct: 268 HHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLD 327
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + L + G + EA ++ +MP + + W ++L+
Sbjct: 328 FSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSG 370
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 254/479 (53%), Gaps = 33/479 (6%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N H+L+ + + G A +F P + I A + AV +
Sbjct: 105 NPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAF 164
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
A+ +RPD+++ VL A +++ + G + G+ V V A + +Y C
Sbjct: 165 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKC---- 220
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
G++ AR +F+ M K+ ++W ++ GYA
Sbjct: 221 -----------------------------GEMAKAREVFDKMRHKDAVAWGAMVGGYASN 251
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
P EA+ LF MQ E +KPD A+ ALSAC +LGA++LG ++ L
Sbjct: 252 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 311
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
ALIDMYAK G +A VF+ M+ K +I W MI GL + G + A + +ME++ VK
Sbjct: 312 TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 371
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
N+ TFI +L +C H GL++ GRRYF+ M Y I P+IE YGCM+DLL RAG LQEA +
Sbjct: 372 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQ 431
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP ANA I G+LL I+ + EL E L+ LI LEP NSGNY +LSNIY+ GR
Sbjct: 432 LVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGR 491
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
W ++ K+R M+ GV+K+P CS++E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 492 WEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 550
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 152/321 (47%), Gaps = 36/321 (11%)
Query: 74 PDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P + + P LK+ +L + G ++H +++ ++ HV+ +L+ +YA C ++ A++
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFDE+ + W ++ Y GDL
Sbjct: 128 VFDEMPHP--STVPWTALITAYMDAGDL-------------------------------R 154
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ + R ++PD + L+ACA++ + GE + EQ G+ V + A +
Sbjct: 155 EAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAV 214
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
D+Y K G++ KA +VF+ M++K + W M+ G A +G REALD+F M+ +KP+
Sbjct: 215 DLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCY 274
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
LSAC +G ++LGR+ ++ ++ + +ID+ + G EA + ++
Sbjct: 275 AVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQ 333
Query: 373 MPFEANAAIWGSLLAASNIYG 393
M + + +W +++ + G
Sbjct: 334 M-RKKDIIVWNAMILGLGMTG 353
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ Q+ + + +D G A +F D + + +P A+ L+
Sbjct: 202 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 261
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYAS 123
+QA ++PD Y+ L A +L ++LGR+ I LD+ V + ALI MYA
Sbjct: 262 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAK 320
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C +A VF + +R ++ VWN M+ G G
Sbjct: 321 CGSTVEAWVVFQQ--MRKKDIIVWNAMILGLGMTG------------------------- 353
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLN 242
A L +M+ VK ++ + L +C G ++ G + HN + Y ++
Sbjct: 354 ------HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHIS 407
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALH 289
+ ++D+ +++G + +A Q+ ++M + + ++ G +H
Sbjct: 408 PRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 455
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 259/461 (56%), Gaps = 42/461 (9%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
D +N+ I A Q A+ L+ ++ L D ++ VL A L + G + H
Sbjct: 204 DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFH 263
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
Q + TG + HV + LI +Y+ C G
Sbjct: 264 GQLIKTGFHQNSHVGSGLIDLYSKCG--------------------------------GG 291
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQ-PNEAITLFRRMQVENVKPDEIAMLAALS 218
+++ R +FE +TE +++ W T+++GY+Q ++ +A+ FR+MQ +P++ + + +S
Sbjct: 292 MSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKIGKALQVFENMKN 273
AC+ L + G+ IH+ L + +P N NALI MY+K G + A ++F+ M
Sbjct: 352 ACSNLSSPSQGKQIHSL----ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+ ++ +MIAG A HG+ E+L +F M ++ P ITFI++LSAC H G VE G Y
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
FN+MK ++ IEP+ E Y CMIDLLGRAG L EAE L+ RMPF + W SLL A +G
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Query: 394 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
++EL A +++LEP N+ Y +LSN+YA GRW E +RK MRD GVKK PGCS+I
Sbjct: 528 NIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
Query: 454 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
EV KR+H FVA D+SHP +Y+ L +++G+MK A ++ +
Sbjct: 588 EVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 18/393 (4%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
+ + + FI S G +A F S P+V+ +N I A + PL A L+++I
Sbjct: 42 STYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIP 101
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
PD S+ ++ A + GLD D ++A+I C
Sbjct: 102 ----EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVIT-----ACCD 152
Query: 129 DARKVFDELSLRVWN-----VAVWNTMVAGYAKVGDLNNARALFELMTE-KNVISWTTLI 182
D + S+ V + V+V N ++ Y K GDL++A+ +F M ++ +SW ++I
Sbjct: 153 DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
Y Q + ++A+ LF+ M + D + + L+A L + G H + + G +
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272
Query: 243 TIVPLNNALIDMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFS 300
+ + LID+Y+K G + +VFE + ++ W TM++G + + +AL+ F
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+M+ +PN+ +F+ ++SAC ++ G++ ++ +I +I + +
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G LQ+A +L RM E N S++A +G
Sbjct: 393 GNLQDARRLFDRMA-EHNTVSLNSMIAGYAQHG 424
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I G QN+H+ S ID S G SD +F ++PD+ L+NT + Q + L
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSD-CRKVFEEITEPDLVLWNTMVSGYSQNEEFL 324
Query: 59 -NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD-VHVVAA 116
+A+ + ++Q RP++ SF V+ A LS+ G++IH + + + S+ + V A
Sbjct: 325 EDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNA 384
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI MY+ C + DAR++FD ++ N N+M+AGYA+ G E+
Sbjct: 385 LIAMYSKCGNLQDARRLFDRMAEH--NTVSLNSMIAGYAQHG--------IEM------- 427
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
E++ LF+ M + P I ++ LSACA G VE G W NY
Sbjct: 428 ----------------ESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-W--NYF 468
Query: 237 ----EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG- 290
E++ + + +ID+ ++GK+ +A + M N I W +++ HG
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 291 --LGREALDMFSRMERARVKP 309
L +A + ++E + P
Sbjct: 529 IELAVKAANQVLQLEPSNAAP 549
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
F +LK + + G+ +H + + + + I +Y+ C + ARK F ++S
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
NV +N ++A YAK A LF+ + E +++S+ TLI+ YA + A+ LF
Sbjct: 71 DP--NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
M+ + D + A ++AC V L +H+ G ++ V +NNAL+ Y K+
Sbjct: 129 SGMREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 259 GKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + A +VF M + ++W +MI H G +AL +F M R + + T ++
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 318 LSACCHVGLVEL-GRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPF 375
L+A L +L G F+ + G +IDL + G + + K+ +
Sbjct: 247 LTA--FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT- 303
Query: 376 EANAAIWGSLLAA 388
E + +W ++++
Sbjct: 304 EPDLVLWNTMVSG 316
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 266/492 (54%), Gaps = 35/492 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + + + I SS G D+A +F DV + I + + A++ +
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYAS 123
+++ + + + + VLKA K+ + GR +H + TG + DV + ++L+ MY
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C DA+KVFDE+ R NV W ++AGY + +R
Sbjct: 253 CSCYDDAQKVFDEMPSR--NVVTWTALIAGYVQ------SRCF----------------- 287
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++ + +F M +V P+E + + LSACA +GA+ G +H Y+ + +
Sbjct: 288 --------DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
LID+Y K G + +A+ VFE + K+V TWT MI G A HG R+A D+F M
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ V PNE+TF+A+LSAC H GLVE GRR F MK R+ +E K + Y CM+DL GR G L
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLL 459
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA+ L+ RMP E +WG+L + ++ D ELG+ A +IKL+P +SG Y +L+N+Y
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLY 519
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP-DFDRLYQILCKI 482
+ W+E ++RK M+D V K PG S+IEV ++ EF+A D P + D LY+ L +
Sbjct: 520 SESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Query: 483 NGQMKFAEHLQN 494
QM+ + L++
Sbjct: 580 GVQMRLPDELED 591
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 170/386 (44%), Gaps = 40/386 (10%)
Query: 12 LLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNPLNAVILYNKIQ 68
LSR + C + YA + + L+++ I T N + + Y ++
Sbjct: 37 FLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMR 96
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
+ + P ++FP +LKAV KL + H V GLDSD V +LI Y+S
Sbjct: 97 RNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFD 155
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
A ++FD + +V W M+ G+ + G
Sbjct: 156 FASRLFDGAEDK--DVVTWTAMIDGFVRNG------------------------------ 183
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPL 247
+EA+ F M+ V +E+ +++ L A ++ V G +H Y+E + V +
Sbjct: 184 -SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
++L+DMY K A +VF+ M +++V+TWT +IAG + + +F M ++ V
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
PNE T ++LSAC HVG + GRR M + IE +IDL + G L+EA
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYG 393
+ R+ E N W +++ +G
Sbjct: 362 LVFERL-HEKNVYTWTAMINGFAAHG 386
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 279/495 (56%), Gaps = 34/495 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V GL + L ++ +D ++ G +A +F K +V+L+N I+A + A
Sbjct: 88 LLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAA 147
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V LY + + PDN+++P VLKA L +E GRE+H + GT DV V A ++ M
Sbjct: 148 VRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDM 207
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA K G +++ARA+F+ + ++ + W +
Sbjct: 208 YA---------------------------------KCGCVDDARAVFDGIAVRDAVVWNS 234
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+IA Y Q +P EA+ L R M + P +++A+SA A A+ G +H + + G
Sbjct: 235 MIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRG 294
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L +L+DMYAKSG + A +FE + + +++W MI G +HG EAL +F+
Sbjct: 295 FGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFN 354
Query: 301 RME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+M+ A+V P+ ITF+ +LSAC H G+VE + +F +M + Y I+P ++ Y C+ID+LG
Sbjct: 355 KMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGH 414
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G +EA L++ M E ++ IWG+LL I+ +VELGE ALQ LI+LEP ++GNY L
Sbjct: 415 TGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHL 474
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SNIYA G+W ++ ++RK+M + G+KK+ CS+IE+ + H F+ GD SHP D +Y L
Sbjct: 475 SNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGEL 534
Query: 480 CKINGQMKFAEHLQN 494
++ G M A ++ +
Sbjct: 535 ERLEGLMSDAGYVPD 549
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 42/308 (13%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
+L++ V ++ GR++H + + +GL D + L+ +YA+C + AR++FD + R
Sbjct: 68 ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR- 126
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE-AITLFRR 200
NV +WN ++ YA+ G P E A+ L+R
Sbjct: 127 -NVFLWNVLIRAYAREG--------------------------------PREAAVRLYRG 153
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M V+PD L ACA L +E G +H + V + ++DMYAK G
Sbjct: 154 MVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGC 213
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ A VF+ + + + W +MIA +G EAL + M + P T ++ +SA
Sbjct: 214 VDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSA 273
Query: 321 CCHVGLVELGRRYFNIMKSR-YGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPF 375
+ GR R +G++ K++ ++D+ ++G++Q A E+L++R
Sbjct: 274 AADAAALPRGRELHGFGWRRGFGLQDKLKT--SLVDMYAKSGWVQVARVLFEQLMKRELV 331
Query: 376 EANAAIWG 383
NA I G
Sbjct: 332 SWNAMICG 339
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L +C G++ G +H + GL L+ L+D+YA G++G A ++F+ M ++V
Sbjct: 69 LQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNV 128
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFN 335
W +I A G A+ ++ M V+P+ T+ +L AC + +E GR +
Sbjct: 129 FLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQR 188
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ +R+G + + ++D+ + G + +A + + +A +W S++AA
Sbjct: 189 VSGTRWGQD--VFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAA 238
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 259/461 (56%), Gaps = 42/461 (9%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
D +N+ I A Q A+ L+ ++ L D ++ VL A L + G + H
Sbjct: 204 DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFH 263
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
Q + TG + HV + LI +Y+ C G
Sbjct: 264 GQLIKTGFHQNSHVGSGLIDLYSKCG--------------------------------GG 291
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQ-PNEAITLFRRMQVENVKPDEIAMLAALS 218
+++ R +FE +TE +++ W T+++GY+Q ++ +A+ FR+MQ +P++ + + +S
Sbjct: 292 MSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLN-----NALIDMYAKSGKIGKALQVFENMKN 273
AC+ L + G+ IH+ L + +P N NALI MY+K G + A ++F+ M
Sbjct: 352 ACSNLSSPSQGKQIHSL----ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
+ ++ +MIAG A HG+ E+L +F M ++ P ITFI++LSAC H G VE G Y
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
FN+MK ++ IEP+ E Y CMIDLLGRAG L EAE L+ RMPF + W SLL A +G
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Query: 394 DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
++EL A +++LEP N+ Y +LSN+YA GRW E +RK MRD GVKK PGCS+I
Sbjct: 528 NIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
Query: 454 EVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
EV KR+H FVA D+SHP +Y+ L +++G+MK A ++ +
Sbjct: 588 EVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 18/393 (4%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
+ + + FI S G +A F S P+V+ +N I A + PL A L+++I
Sbjct: 42 STYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIP 101
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
PD S+ ++ A + GLD D ++A+I C
Sbjct: 102 ----EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVIT-----ACCD 152
Query: 129 DARKVFDELSLRVWN-----VAVWNTMVAGYAKVGDLNNARALFELMTE-KNVISWTTLI 182
D + S+ V + V+V N ++ Y K GDL++A+ +F M ++ +SW ++I
Sbjct: 153 DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
Y Q + ++A+ LF+ M + D + + L+A L + G H + + G +
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272
Query: 243 TIVPLNNALIDMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFS 300
+ + LID+Y+K G + +VFE + ++ W TM++G + + +AL+ F
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+M+ +PN+ +F+ ++SAC ++ G++ ++ +I +I + +
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G LQ+A +L RM E N S++A +G
Sbjct: 393 GNLQDARRLFDRMA-EHNTVSLNSMIAGYAQHG 424
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I G QN+H+ S ID S G SD +F ++PD+ L+NT + Q + L
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSD-CRKVFEEITEPDLVLWNTMVSGYSQNEEFL 324
Query: 59 -NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD-VHVVAA 116
+A+ + ++Q RP++ SF V+ A LS+ G++IH + + + S+ + V A
Sbjct: 325 EDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNA 384
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI MY+ C + DAR++FD ++ N N+M+AGYA+ G E+
Sbjct: 385 LIAMYSKCGNLQDARRLFDRMAEH--NTVSLNSMIAGYAQHG--------IEM------- 427
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
E++ LF+ M + P I ++ LSACA G VE G W NY
Sbjct: 428 ----------------ESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-W--NYF 468
Query: 237 ----EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG- 290
E++ + + +ID+ ++GK+ +A + M N I W +++ HG
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 291 --LGREALDMFSRMERARVKP 309
L +A + ++E + P
Sbjct: 529 IELAVKAANQVLQLEPSNAAP 549
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 79 FPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELS 138
F +LK + + G+ +H + + + + I +Y+ C + ARK F ++S
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
NV +N ++A YAK A LF+ + E +++S+ TLI+ YA + A+ LF
Sbjct: 71 DP--NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
M+ + D + A ++AC V L +H+ G ++ V +NNAL+ Y K+
Sbjct: 129 SGMREMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 259 GKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + A +VF M + ++W +MI H G +AL +F M R + + T ++
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 318 LSACCHVGLVEL-GRRYFNIMKSRYGIEPKIEQYGCMIDLLGR-AGYLQEAEKLLRRMPF 375
L+A L +L G F+ + G +IDL + G + + K+ +
Sbjct: 247 LTA--FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT- 303
Query: 376 EANAAIWGSLLAA 388
E + +W ++++
Sbjct: 304 EPDLVLWNTMVSG 316
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 265/460 (57%), Gaps = 38/460 (8%)
Query: 2 IVR-GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
I+R G DQN ++ + ID C S G +YA +F D +L+NT I+ + L
Sbjct: 78 IIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLL 137
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A Y ++ + DN++F F+LK +L +I LG+++H + GLDS V+V LI
Sbjct: 138 MAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLI 197
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY K + AR +FDEL + ++++W
Sbjct: 198 HMYGRLKDVNIARNLFDELP---------------------------------KTDLVAW 224
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+I + NEA+ LF +M V+PDE ++ +SAC+ LGA++ G W+H+++
Sbjct: 225 NAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNS 284
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+ + N+LIDMYAK G + A ++F + K+++TW TMI GLA HG +AL +
Sbjct: 285 NDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTL 344
Query: 299 FSRMERARVK-PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
FS M RV+ P+ +TF+A+L AC + G VE GRRYF++M + I+P ++ YG M+D+L
Sbjct: 345 FSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDIL 404
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG+++EA +L++ MP E NA IW +LLAA ++G+VELGE H++++ +S +Y
Sbjct: 405 GRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYV 464
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKK-MPGCSYIEVS 456
+L+N+YA G+WNE K RK M GV+K PG SY+E++
Sbjct: 465 LLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 504
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 254/449 (56%), Gaps = 36/449 (8%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N I+ +D+P A+ L+ +++ +RP+N +FPF+LKA L+T++ G++ H +
Sbjct: 99 WNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAI 158
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
GLD DV+V LI Y SCK ++ A
Sbjct: 159 KCGLDLDVYVRNTLIYFYGSCK---------------------------------RMSGA 185
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
R +F+ MTE+ ++SW +I + +EAI F +M +PDE M+ LSACA+L
Sbjct: 186 RKVFDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAEL 245
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
G + LG W+H+ + G+ V L A +DMYAKSG +G A VF +K KSV TW+ MI
Sbjct: 246 GNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMI 305
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
GLA HG EA+++F+ M + + PN +TFI +L AC H GLV+ YFN+M+ YGI
Sbjct: 306 LGLAQHGFANEAIELFTNMMSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGI 365
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS---NIYGDVELGEC 400
+P + YG M+D+LGRAG ++EA +L+ MP E + +W +LL+A ++ G E+ E
Sbjct: 366 KPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEE 425
Query: 401 ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVH 460
A + L++LEP GN +++N +A LG W ++ R+ M+D G+KKM G S IE+ +
Sbjct: 426 ARKRLLELEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIELGGSLR 485
Query: 461 EFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+F +G S D +Y +L +N M+
Sbjct: 486 KFFSGFDSRAAPDGIYDLLDGLNLHMQLT 514
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 225
LF + W +I GY+ D P EAI+LF M+ V+P+ + L ACA L
Sbjct: 87 LFHCHFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLAT 146
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
++ G+ H + GL+ V + N LI Y ++ A +VF+ M +++++W +I
Sbjct: 147 LQEGKQFHAIAIKCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWNAVITA 206
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
+ EA+D F +M +P+E T + ILSAC +G + LGR + + R G+
Sbjct: 207 CVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGR-GMVL 265
Query: 346 KIEQYGCMIDLLGRAG 361
++ +D+ ++G
Sbjct: 266 NVQLGTAFVDMYAKSG 281
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 41/285 (14%)
Query: 5 GLDQNNHL---LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GLD + ++ L F SC + A +F ++ + +N I A + A+
Sbjct: 161 GLDLDVYVRNTLIYFYGSCKRM---SGARKVFDEMTERTLVSWNAVITACVENFCFDEAI 217
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ K+ PD + +L A +L + LGR +H Q VG G+ +V + A + MY
Sbjct: 218 DYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMY 277
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A + AR VF+ L + +V W+ M+ G A+
Sbjct: 278 AKSGDVGCARHVFNCLKQK--SVWTWSAMILGLAQ------------------------- 310
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YG 240
G+A NEAI LF M + P+ + + L AC+ G V+ N +E+ YG
Sbjct: 311 -HGFA-----NEAIELFTNMMSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYG 364
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIA 284
+ ++ +++D+ ++G++ +A ++ +M I W T+++
Sbjct: 365 IKPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLS 409
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 295/557 (52%), Gaps = 71/557 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V GL + L+++ I + SS G +A +F +P ++ +N I+ + ++ +A
Sbjct: 44 LLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDA 103
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+++Y+ +Q + + PD+++FP +LKA LS +++GR +H Q G D+DV V LI +
Sbjct: 104 LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL 163
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV-ISWT 179
YA C+ + AR VF+ L L + W +V+ YA+ G+ A +F M + +V W
Sbjct: 164 YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWV 223
Query: 180 TLIA--------------------------------------GYAQMDQPNEAITLFRRM 201
L++ YA+ Q A LF +M
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 202 QVEN-------------------------------VKPDEIAMLAALSACAQLGAVELGE 230
+ N V+PD I++ +A+SACAQ+G++E
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
++ Y+ + V +++ALIDM+AK G + A VF+ ++ V+ W+ MI G LHG
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
REA+ ++ MER V PN++TF+ +L AC H G+V G +FN+M + + I P+ + Y
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADHKINPQQQHY 462
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
C+IDLLGRAG+L +A ++++ MP + +WG+LL+A + VELGE A Q L ++P
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
N+G+Y LSN+YA W+ ++R M++ G+ K GCS++EV R+ F GD SHP
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 471 DFDRLYQILCKINGQMK 487
++ + + + I ++K
Sbjct: 583 RYEEIERQVEWIESRLK 599
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + GL L LI + G I A QVF+++ + W +I G + +
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
++AL M+S M+ ARV P+ TF +L AC + +++G R+ + R G + +
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVFVQN 158
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPF-EANAAIWGSLLAA 388
+I L + L A + +P E W ++++A
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>gi|218186152|gb|EEC68579.1| hypothetical protein OsI_36919 [Oryza sativa Indica Group]
Length = 586
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 254/441 (57%), Gaps = 4/441 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNP-LNAVILYNKIQASALRPDNYSFPFVLKAVV 87
A +F + D+Y+Y++ + A+ + +P L IL + A AL PD++ V
Sbjct: 33 ALHLFDETPRRDIYIYSSLLTAISHSASPELALPILRCMLSADALHPDHFVISSVASVFA 92
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+L + LGR++H V + + D V ++L+ MY C D RKVFD +S + N VW
Sbjct: 93 RLRSRRLGRQLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK--NSVVW 150
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+V+GYA G A LF M +N+ +WT LI+G + A+ LF M+ + V+
Sbjct: 151 TALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVR 210
Query: 208 PDEIAMLA-ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D+ +L+ + A A L A LG +H + G + + + NALIDMY+K I A +
Sbjct: 211 IDDAFVLSIVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMYSKCSDILSARE 270
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VFE + + VI+WTTM+ G A HG EAL ++ RM A KPNE+TF+ ++ AC H GL
Sbjct: 271 VFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGL 330
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ GR+ F MK+ YGI P+++ Y C +DLL R+G+L EAE+L+ MP+E + A WG+LL
Sbjct: 331 VQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALL 390
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+A Y D E+ L++L P +S Y +LSN+YA+ G+W+ K+RK M + ++K
Sbjct: 391 SACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRK 450
Query: 447 MPGCSYIEVSKRVHEFVAGDT 467
PG S+IE + F AG+
Sbjct: 451 EPGYSWIEAGREFRLFHAGEV 471
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 42/237 (17%)
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H + + GL AAL+ YA + + DA +FDE R
Sbjct: 1 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRR----------------- 43
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAA 216
++ +++L+ + P A+ + R M + + PD + +
Sbjct: 44 ----------------DIYIYSSLLTAISHSASPELALPILRCMLSADALHPDHFVISSV 87
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
S A+L + LG +H + N + ++L+DMY K G +VF++M K+
Sbjct: 88 ASVFARLRSRRLGRQLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNS 147
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH----VGLVEL 329
+ WT +++G A +G EAL +F R+ N + A++S + VG VEL
Sbjct: 148 VVWTALVSGYASNGRSEEALQLF----RSMPGRNLFAWTALISGLVNTGESVGAVEL 200
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 272/486 (55%), Gaps = 37/486 (7%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
R L N LL +++ G + A +F SK Y ++ + + N + +
Sbjct: 83 RNLAVANKLLYMYVER----GALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWM 138
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ ++ S D+YS P V++A L ++ GR IHC T+ GLD V A L+ MYA
Sbjct: 139 FRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYAR 198
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
CK + DA + +F M ++++ +WT +I
Sbjct: 199 CKVVEDAHQ---------------------------------IFVKMWKRDLATWTVMIG 225
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
A+ P E++ F RM+ + + PD++A++ + ACA+LGA+ + IH YI G +
Sbjct: 226 ALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSL 285
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V L A+IDMYAK G + A +F+ M+ ++VITW+ MIA HG G +AL++F M
Sbjct: 286 DVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMML 345
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
R+ + PN ITF+++L AC H GL+E G+R+F+ M YG+ P ++ Y CM+DLLGRAG L
Sbjct: 346 RSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRL 405
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
EA +++ MP E + +WG+LL A I+ ++L E + L+KL+ G+Y +LSNIY
Sbjct: 406 DEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIY 465
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A G+W + K R +M G++K+PG ++IEV +++++F GD +HP + +Y++L ++
Sbjct: 466 ANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLG 525
Query: 484 GQMKFA 489
+++ A
Sbjct: 526 EKLEVA 531
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 40/309 (12%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R++H Q G ++ V L+ MY + DA+++FD +S R + W+ +V GYA
Sbjct: 70 RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKR--HPYSWSVIVGGYA 127
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
KVG+ + +FR + D+ +
Sbjct: 128 KVGNFFS-------------------------------CFWMFRELLRSGAPLDDYSAPV 156
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
+ AC L ++ G IH + GL+ + L+DMYA+ + A Q+F M +
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRD 216
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YF 334
+ TWT MI LA G+ E+L F RM + P+++ + ++ AC +G + + +
Sbjct: 217 LATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
I + Y ++ + MID+ + G ++ A + RM N W +++AA +G
Sbjct: 277 YINGTGYSLDVILGT--AMIDMYAKCGSVESARWIFDRMQVR-NVITWSAMIAAYGYHGQ 333
Query: 395 VELGECALQ 403
GE AL+
Sbjct: 334 ---GEKALE 339
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
++L +C L V +H I G + + N L+ MY + G + A ++F+ M +
Sbjct: 58 SSLLSCRNLFQVRQ---VHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKR 114
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+W+ ++ G A G MF + R+ ++ + ++ AC + ++ G R
Sbjct: 115 HPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCG-RLI 173
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + + G++ ++D+ R +++A ++ +M ++ + A W ++ A
Sbjct: 174 HCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKM-WKRDLATWTVMIGA 226
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 269/487 (55%), Gaps = 37/487 (7%)
Query: 31 SIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
++F S D YNT I A+ + ++Q +Y+ VL A +L
Sbjct: 110 AVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLL 169
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
I+ G++IH + V T L V V AL MYA C + AR +FD + + NV WN+M
Sbjct: 170 DIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNK--NVVSWNSM 227
Query: 151 VAGYAKVGD-----------------------------------LNNARALFELMTEKNV 175
++GY + G ++ A F + EK+
Sbjct: 228 ISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDK 287
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+ WTT++ G AQ + +A+ LFR M +ENV+PD + + +S+CA+L ++ G+ +H
Sbjct: 288 VCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGK 347
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+G++ + +++AL+DMY+K G+ A VF+ M ++VI+W +MI G A +G EA
Sbjct: 348 AVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEA 407
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L ++ M +KP+ ITF+ +LSAC H GLVE G+ YF + +G+ P + Y CMI+
Sbjct: 408 LALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMIN 467
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAGY+ +A L++ M FE N IW +LL+ I DV GE A +HL +L+PHN+G
Sbjct: 468 LLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGP 527
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA GRW + +R +M++ +KK S+IE+ +VH+FVA D +H + +++
Sbjct: 528 YIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQI 587
Query: 476 YQILCKI 482
Y+ L ++
Sbjct: 588 YEELNRL 594
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 145/268 (54%), Gaps = 7/268 (2%)
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
+D + L+ +YA + DAR +FD++S R +V WN M++ Y+K G++ + RA+F+
Sbjct: 56 TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRR--DVFSWNAMLSAYSKSGNVEDLRAVFD 113
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
M+ + +S+ T+IAG++ ++A+ F RMQ E + + ++ L AC+QL ++
Sbjct: 114 QMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKR 173
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
G+ IH I L V + NAL +MYAK G + +A +F+ M NK+V++W +MI+G
Sbjct: 174 GKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQ 233
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+G +F M+ + + P+++T ILSA G ++ + F +K + +
Sbjct: 234 NGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTM 293
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
GC + G ++A L R M E
Sbjct: 294 MVGC-----AQNGKEEDALLLFREMLLE 316
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 137/287 (47%), Gaps = 37/287 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M GL + +S + + G+ D A F + D + T + Q +A
Sbjct: 247 MQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDA 306
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++L+ ++ +RPDN++ V+ + +L+++ G+ +H + V G+D D+ V +AL+ M
Sbjct: 307 LLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDM 366
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG-DLNNARALFELMTEKNVISWT 179
Y+ C DA VF + R NV WN+M+ GYA+ G DL
Sbjct: 367 YSKCGETADAWIVFKRMLTR--NVISWNSMILGYAQNGKDL------------------- 405
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQ 238
EA+ L+ M EN+KPD I + LSAC G VE G+ + ++ +
Sbjct: 406 -------------EALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKI 452
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIA 284
+G+N + +I++ ++G + KA+ + ++M + + W+T+++
Sbjct: 453 HGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
++ G+D + + S +D S G + A+ +F +V +N+ I Q L A+
Sbjct: 349 VIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEAL 408
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGR-------EIHCQTVGTGLDSDVHVV 114
LY ++ L+PDN +F VL A + +E G+ +IH G++
Sbjct: 409 ALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIH------GMNPTFDHY 462
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN----ARALFEL 169
+ +I + + A + ++ N +W+T+++ D+NN AR LFEL
Sbjct: 463 SCMINLLGRAGYMDKAVDLIKSMTFEP-NCLIWSTLLSVCRINCDVNNGEMAARHLFEL 520
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 277/497 (55%), Gaps = 4/497 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ N+ ++S +D D A +F ++ L N + A+ ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + S +RPD S + + +L I G+ H + G +S ++ ALI MY C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
A ++FD +S + V WN++VAGY + G+++ A FE M EKN++SW T+I+G
Sbjct: 386 HRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 185 YAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
Q EAI +F MQ E V D + M++ SAC LGA++L +WI+ YIE+ G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V L L+DM+++ G A+ +F ++ N+ V WT I +A+ G A+++F M
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP+ + F+ L+AC H GLV+ G+ F M +G+ P+ YGCM+DLLGRAG L
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA +L+ MP E N IW SLLAA + G+VE+ A + + L P +G+Y +LSN+Y
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 683
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A GRWN+ K+R M++ G++K PG S I++ + HEF +GD SHP+ + +L +++
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Query: 484 GQMKFAEHLQNEFSGVL 500
+ H+ + S VL
Sbjct: 744 QRASHLGHVP-DLSNVL 759
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 192/401 (47%), Gaps = 45/401 (11%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLN 59
+GLD + +++ + LG + +A +F + +S ++YN+ I+ +
Sbjct: 58 QGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNE 117
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A++L+ ++ S + PD Y+FPF L A K G +IH V G D+ V
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV------ 171
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
N++V YA+ G+L++AR +F+ M+E+NV+SWT
Sbjct: 172 ---------------------------QNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 180 TLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
++I GYA+ D +A+ LF RM + E V P+ + M+ +SACA+L +E GE ++ +I
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ + +AL+DMY K I A ++F+ ++ M + GL REAL +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F+ M + V+P+ I+ ++ +S+C + + G+ + R G E +ID+
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL-RNGFESWDNICNALIDMYM 383
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ A ++ RM W S++A G VE GE
Sbjct: 384 KCHRQDTAFRIFDRMS-NKTVVTWNSIVA-----GYVENGE 418
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 262/445 (58%), Gaps = 7/445 (1%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKL--STIELGRE 97
++++YN+ I+ + +P A++ Y + L +NY+FP ++KA L S+ +G
Sbjct: 348 NIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIGCL 407
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H V G D D VV+ALI+ Y+ + AR +FD + R +V +W M+ GY K+
Sbjct: 408 VHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNR--DVVLWTAMIDGYGKM 465
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
GD+ +AR LFE M E+N ISW+ ++A Y+++ E + LFRRMQ P+E +++ L
Sbjct: 466 GDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVL 525
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
+ACA LGA+ G W+H+Y +Q ++ L AL+DMY+K G + AL F+ + NK
Sbjct: 526 TACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAG 585
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
W MI+G+A++G ++L++F++M +P E TF+A+L+AC H LV G + F M
Sbjct: 586 AWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLFEQM 645
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIYGD 394
S YG+EP+ E Y C++DL+ RAG L EAEK + +A +WG+ L A YG+
Sbjct: 646 SSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLGACRTYGN 705
Query: 395 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
+E+G + L + + G + + N+Y G E+ ++R+++ + G+KK PGCS IE
Sbjct: 706 IEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKKKPGCSIIE 765
Query: 455 VSKRVHEFVAGDTSHPDFDRLYQIL 479
V V EF+AGD SH ++ + L
Sbjct: 766 VDGTVEEFLAGDLSHSQAPQICKTL 790
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE-- 227
++ +N+ + ++I GY P AI + M + + + AC LG+
Sbjct: 344 LSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKL 403
Query: 228 LGEWIHNYIEQYGL-------------------------------NTIVPLNNALIDMYA 256
+G +H ++ +G N V L A+ID Y
Sbjct: 404 IGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYG 463
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G + A +FE+M ++ I+W+ ++A + G +E L +F RM+ A PNE ++
Sbjct: 464 KMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVS 523
Query: 317 ILSACCHVGLVELGRRYFNIMKS-RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L+AC H+G + G + K + P + ++D+ + G ++ A + +P
Sbjct: 524 VLTACAHLGALAQGLWVHSYAKQCNFDSNPILAT--ALVDMYSKCGCVESALSTFQGIP- 580
Query: 376 EANAAIWGSLLAASNIYGD 394
+A W ++++ + GD
Sbjct: 581 NKDAGAWNAMISGVAMNGD 599
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 117/322 (36%), Gaps = 65/322 (20%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + ID +G ++A +F + + ++ + A + + + L+ ++Q +
Sbjct: 454 LWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAG 513
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
P+ VL A L + G +H DS+ + AL+ MY+ C C+ A
Sbjct: 514 TMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESAL 573
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
F + + + WN M++G A GD +W +L
Sbjct: 574 STFQGIPNK--DAGAWNAMISGVAMNGD-----------------AWKSL---------- 604
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNA 250
LF +M +P E +A L+AC V G + YG+
Sbjct: 605 ----ELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLFEQMSSNYGVEPQXEHYAC 660
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
L+D+ A++G + +A + E + GLGR +++
Sbjct: 661 LVDLMARAGMLAEAEKFIEE----------------KMGGLGRGDANVWG---------- 694
Query: 311 EITFIAILSACCHVGLVELGRR 332
A L AC G +E+G R
Sbjct: 695 -----AXLGACRTYGNIEVGNR 711
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 254/479 (53%), Gaps = 33/479 (6%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N H+L+ + + G A +F P + I A + AV +
Sbjct: 584 NPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAF 643
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
A+ +RPD+++ VL A +++ + G + G+ V V A + +Y C
Sbjct: 644 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKC---- 699
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
G++ AR +F+ M K+ ++W ++ GYA
Sbjct: 700 -----------------------------GEMAKAREVFDKMRHKDAVAWGAMVGGYASN 730
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
P EA+ LF MQ E +KPD A+ ALSAC +LGA++LG ++ L
Sbjct: 731 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 790
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
ALIDMYAK G +A VF+ M+ K +I W MI GL + G + A + +ME++ VK
Sbjct: 791 TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 850
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
N+ TFI +L +C H GL++ GRRYF+ M Y I P+IE YGCM+DLL RAG LQEA +
Sbjct: 851 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQ 910
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP ANA I G+LL I+ + EL E L+ LI LEP NSGNY +LSNIY+ GR
Sbjct: 911 LVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGR 970
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
W ++ K+R M+ GV+K+P CS++E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 971 WEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 1029
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 152/321 (47%), Gaps = 36/321 (11%)
Query: 74 PDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P + + P LK+ +L + G ++H +++ ++ HV+ +L+ +YA C ++ A++
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFDE+ + W ++ Y GDL
Sbjct: 607 VFDEMPHP--STVPWTALITAYMDAGDL-------------------------------R 633
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ + R ++PD + L+ACA++ + GE + EQ G+ V + A +
Sbjct: 634 EAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAV 693
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
D+Y K G++ KA +VF+ M++K + W M+ G A +G REALD+F M+ +KP+
Sbjct: 694 DLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCY 753
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
LSAC +G ++LGR+ ++ ++ + +ID+ + G EA + ++
Sbjct: 754 AVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQ 812
Query: 373 MPFEANAAIWGSLLAASNIYG 393
M + + +W +++ + G
Sbjct: 813 M-RKKDIIVWNAMILGLGMTG 832
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ Q+ + + +D G A +F D + + +P A+ L+
Sbjct: 681 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 740
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYAS 123
+QA ++PD Y+ L A +L ++LGR+ I LD+ V + ALI MYA
Sbjct: 741 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAK 799
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C +A VF + +R ++ VWN M+ G G
Sbjct: 800 CGSTVEAWVVFQQ--MRKKDIIVWNAMILGLGMTG------------------------- 832
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLN 242
A L +M+ VK ++ + L +C G ++ G + HN + Y ++
Sbjct: 833 ------HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHIS 886
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALH 289
+ ++D+ +++G + +A Q+ ++M + + ++ G +H
Sbjct: 887 PRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 934
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 254/479 (53%), Gaps = 33/479 (6%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N H+L+ + + G A +F P + I A + AV +
Sbjct: 560 NPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAF 619
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
A+ +RPD+++ VL A +++ + G + G+ V V A + +Y C
Sbjct: 620 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKC---- 675
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
G++ AR +F+ M K+ ++W ++ GYA
Sbjct: 676 -----------------------------GEMAKAREVFDKMRHKDAVAWGAMVGGYASN 706
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
P EA+ LF MQ E +KPD A+ ALSAC +LGA++LG ++ L
Sbjct: 707 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 766
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
ALIDMYAK G +A VF+ M+ K +I W MI GL + G + A + +ME++ VK
Sbjct: 767 TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 826
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
N+ TFI +L +C H GL++ GRRYF+ M Y I P+IE YGCM+DLL RAG LQEA +
Sbjct: 827 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQ 886
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
L+ MP ANA I G+LL I+ + EL E L+ LI LEP NSGNY +LSNIY+ GR
Sbjct: 887 LVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGR 946
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
W ++ K+R M+ GV+K+P CS++E +VHEF GD SHP D++Y+ L ++ +MK
Sbjct: 947 WEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 1005
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 152/321 (47%), Gaps = 36/321 (11%)
Query: 74 PDNYSFPFVLKAVVKLS-TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P + + P LK+ +L + G ++H +++ ++ HV+ +L+ +YA C ++ A++
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFDE+ + W ++ Y GDL
Sbjct: 583 VFDEMPHP--STVPWTALITAYMDAGDL-------------------------------R 609
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ + R ++PD + L+ACA++ + GE + EQ G+ V + A +
Sbjct: 610 EAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAV 669
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
D+Y K G++ KA +VF+ M++K + W M+ G A +G REALD+F M+ +KP+
Sbjct: 670 DLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCY 729
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
LSAC +G ++LGR+ ++ ++ + +ID+ + G EA + ++
Sbjct: 730 AVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQ 788
Query: 373 MPFEANAAIWGSLLAASNIYG 393
M + + +W +++ + G
Sbjct: 789 M-RKKDIIVWNAMILGLGMTG 808
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ Q+ + + +D G A +F D + + +P A+ L+
Sbjct: 657 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 716
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGRE-IHCQTVGTGLDSDVHVVAALIQMYAS 123
+QA ++PD Y+ L A +L ++LGR+ I LD+ V + ALI MYA
Sbjct: 717 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAK 775
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C +A VF + +R ++ VWN M+ G G
Sbjct: 776 CGSTVEAWVVFQQ--MRKKDIIVWNAMILGLGMTG------------------------- 808
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLN 242
A L +M+ VK ++ + L +C G ++ G + HN + Y ++
Sbjct: 809 ------HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHIS 862
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALH 289
+ ++D+ +++G + +A Q+ ++M + + ++ G +H
Sbjct: 863 PRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 910
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 277/497 (55%), Gaps = 4/497 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ N+ ++S +D D A +F ++ L N + A+ ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + S +RPD S + + +L I G+ H + G +S ++ ALI MY C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
A ++FD +S + V WN++VAGY + G+++ A FE M EKN++SW T+I+G
Sbjct: 386 HRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 185 YAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
Q EAI +F MQ E V D + M++ SAC LGA++L +WI+ YIE+ G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V L L+DM+++ G A+ +F ++ N+ V WT I +A+ G A+++F M
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP+ + F+ L+AC H GLV+ G+ F M +G+ P+ YGCM+DLLGRAG L
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA +L+ MP E N IW SLLAA + G+VE+ A + + L P +G+Y +LSN+Y
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 683
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A GRWN+ K+R M++ G++K PG S I++ + HEF +GD SHP+ + +L +++
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Query: 484 GQMKFAEHLQNEFSGVL 500
+ H+ + S VL
Sbjct: 744 QRASHLGHVP-DLSNVL 759
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 192/401 (47%), Gaps = 45/401 (11%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLN 59
+GLD + +++ + LG + +A +F + +S ++YN+ I+ +
Sbjct: 58 QGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNE 117
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A++L+ ++ S + PD Y+FPF L A K G +IH V G D+ V
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV------ 171
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
N++V YA+ G+L++AR +F+ M+E+NV+SWT
Sbjct: 172 ---------------------------QNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 180 TLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
++I GYA+ D +A+ LF RM + E V P+ + M+ +SACA+L +E GE ++ +I
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ + +AL+DMY K I A ++F+ ++ M + GL REAL +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F+ M + V+P+ I+ ++ +S+C + + G+ + R G E +ID+
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL-RNGFESWDNICNALIDMYM 383
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ A ++ RM W S++A G VE GE
Sbjct: 384 KCHRQDTAFRIFDRMS-NKTVVTWNSIVA-----GYVENGE 418
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 268/492 (54%), Gaps = 42/492 (8%)
Query: 36 KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ--ASALRPDNYSFPFVLKAVVKLSTIE 93
+S+ +N I+AL + +A++L+ ++ A PD+Y++P LK+ +
Sbjct: 81 RSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLL 140
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
LG +IH LD +V+V + I MY+ C DA +VFD + R +V WN M+AG
Sbjct: 141 LGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHR--DVVSWNAMIAG 198
Query: 154 YAKVG--------------------------------------DLNNARALFELMTEKNV 175
+A+VG D+ R +F+ M K +
Sbjct: 199 FARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKEL 258
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISW ++A YA + +A+ LF M+ + V+PD I + L C +L A +G+ IH
Sbjct: 259 ISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEI 318
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I++ + + L NAL+DMYA G + A ++F+ M + VI+WT++I+ HG GREA
Sbjct: 319 IKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREA 378
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+D+F +M ++P+ I F+A+L+AC H GL+ G+ YF+ M SRY I PK E Y CM+D
Sbjct: 379 VDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVD 438
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG + EA + M E N +WG+LL A I+ ++++G A +L L P +G
Sbjct: 439 LLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGY 498
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN+YA GRW + +R VM + G+KK PG S +E+ +VH F GD HP + +
Sbjct: 499 YVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMI 558
Query: 476 YQILCKINGQMK 487
Y L ++ G+++
Sbjct: 559 YHKLDELLGKIR 570
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 39/266 (14%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
+ +F + ++ +N + + + AV L+ ++ + PD+ + VL
Sbjct: 245 FVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCG 304
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+LS +G+ IH + ++ + AL+ MYASC C+ DAR++FD +S R +V W
Sbjct: 305 ELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSAR--DVISW 362
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++++ Y K G EA+ LF +M + ++
Sbjct: 363 TSIISAYGKHG-------------------------------HGREAVDLFEKMLGQGLE 391
Query: 208 PDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
PD IA +A L+AC+ G + G+ + + +Y + ++D+ ++G I +A
Sbjct: 392 PDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYD 451
Query: 267 VFENM---KNKSVITWTTMIAGLALH 289
M N+ V W ++ +H
Sbjct: 452 FITTMLIEPNERV--WGALLQACRIH 475
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 233/355 (65%), Gaps = 7/355 (1%)
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
D+ L+VW NT G ++A LF M ++V+SW +++A YAQ +PNEA
Sbjct: 146 DKGVLKVWMHNNKNTF-------GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEA 198
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ LF +M+ VKP E +++ LSACA LGA++ G +H YI + + AL+DM
Sbjct: 199 LALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDM 258
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
YAK GKI A QVF M++K V+ W T+IAG+A+HG +EA +F M+ A V+PN+ITF
Sbjct: 259 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITF 318
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+A+LSAC H G+V+ G++ + M S YGIEPK+E YGC+IDLL RAG L+EA +L+ MP
Sbjct: 319 VAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMP 378
Query: 375 FEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGK 434
E N G+LL I+G+ ELGE + LI L+P +SG Y +LSNIYA +W+++ K
Sbjct: 379 MEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARK 438
Query: 435 IRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+R +M+ G+ K+PG S IE+ VH FVAGD SHP+ +++Y+ L +I+ ++K A
Sbjct: 439 VRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 493
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 35/272 (12%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
++ G D A+ +F+ DV +N+ + Q P A+ L+++++A ++P +
Sbjct: 159 NTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVV 218
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L A L ++ G +H ++ + V AL+ MYA C I A +VF+ + +
Sbjct: 219 SLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK 278
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V WNT++AG A G + A+ LF+ M E AG
Sbjct: 279 --DVLAWNTIIAGMAIHGHVKEAQRLFKEMKE----------AG---------------- 310
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSG 259
V+P++I +A LSAC+ G V+ G+ + + + YG+ V +ID+ A++G
Sbjct: 311 -----VEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAG 365
Query: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ +A+++ M + ++ G +HG
Sbjct: 366 LLEEAMELIGTMPMEPNPCALGALLGGCRIHG 397
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 259/432 (59%), Gaps = 6/432 (1%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD----VHVVA 115
A+ L K++ ++ D+ ++ ++ A + + ++G+++H + L+ + + V
Sbjct: 273 ALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSN 332
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI +Y + +ARK+F + +R N+ WN +++GY G + A++ FE M KN+
Sbjct: 333 ALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++ T +I+G AQ +E + LF++M+++ +P + A AL+AC+ LGA+E G +H
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G + + + NA+I MYAK G + A VF M + +++W +MIA L HG G +A
Sbjct: 451 LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKA 510
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+++F +M + V P+ ITF+ +L+AC H GLVE GR YFN M YGI P + Y M+D
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVD 570
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
L RAG A ++ MP + A +W +LLA I+G+++LG A + L KL P N G
Sbjct: 571 LFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGT 630
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA +GRWNE K+RK+MRD V+K P CS+IEV +VH F+ D HP+ +
Sbjct: 631 YVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSV 690
Query: 476 YQILCKINGQMK 487
Y+ L ++ +MK
Sbjct: 691 YRYLEQLGLEMK 702
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 211/472 (44%), Gaps = 84/472 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDS-CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN--- 56
MI G H L+R ++ C S YA +F PD T I A C N
Sbjct: 39 MIASGFKPRGHFLNRLLEMYCKSSNLV-YARQLFEEIPNPDAIARTTLITAYCALGNLEL 97
Query: 57 --------PL--------NAVI--------------LYNKIQASALRPDNYSFPFVLKAV 86
PL NA+I L+ ++ RPD+++F VL A+
Sbjct: 98 GREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSAL 157
Query: 87 VKLSTIELG-REIHCQTVGTGLDS-DVHVVAALIQMYA--------SCKCIYDARKVFDE 136
V E ++HC V TG+ V+ AL+ +Y SC + ARK+FDE
Sbjct: 158 VLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDE 217
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R + W TM+ GY + DLN AR +FE M E +W +I+GY EA+T
Sbjct: 218 MPKR--DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALT 275
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT----IVPLNNALI 252
L R+M+ ++ D+I +SACA +G+ ++G+ +H YI + LN + ++NALI
Sbjct: 276 LCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALI 335
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITW-------------------------------TT 281
+Y K+ K+ +A ++F M +++ITW T
Sbjct: 336 TLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTV 395
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
MI+GLA +G G E L +F +M +P + F L+AC +G +E GR+ +
Sbjct: 396 MISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ-LHAQLVHL 454
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G E + MI + + G ++ AE + MP + W S++AA +G
Sbjct: 455 GYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHG 505
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 42/307 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N +LS ++++ G + A S F ++ I L Q
Sbjct: 354 MPVRNIITWNAILSGYVNA----GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEG 409
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ P +++F L A L +E GR++H Q V G +S + V A+I M
Sbjct: 410 LKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISM 469
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A VF +++ ++ WN+M
Sbjct: 470 YAKCGVVEAAESVF--VTMPSVDLVSWNSM------------------------------ 497
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
IA Q +AI LF +M E V PD I L L+AC+ G VE G + ++ +E Y
Sbjct: 498 -IAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG---LGREA 295
G+ ++D++ ++G A V ++M +K W ++AG +HG LG EA
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616
Query: 296 LDMFSRM 302
+ ++
Sbjct: 617 AEQLFKL 623
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 156/347 (44%), Gaps = 53/347 (15%)
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
++ L R +H + +G H + L++MY + AR++F+E+ + T
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP--DAIARTT 84
Query: 150 MVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ Y +G+L R +F + ++ + + +I GYA + A+ LFR M+ ++ +
Sbjct: 85 LITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFR 144
Query: 208 PDEIAMLAALSACAQ-LGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAK-SGKIG-- 262
PD+ + LSA +G + +H + + G+ + + NAL+ +Y K + ++G
Sbjct: 145 PDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIS 204
Query: 263 -----KALQVFENMKNKSVITWTTMIAGLALH---------------------------- 289
A ++F+ M + +TWTTMI G +
Sbjct: 205 CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264
Query: 290 ---GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEP 345
G +EAL + +M ++ ++IT+ I+SAC +VG ++G++ + I+K+ + P
Sbjct: 265 VHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNE--LNP 322
Query: 346 K----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ +I L + + EA K+ MP N W ++L+
Sbjct: 323 NHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSG 368
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A S+F D+ +N+ I AL Q + + A+ L++++ + PD +F VL
Sbjct: 474 GVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVL 533
Query: 84 KAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
A +E GR + + G+ A ++ ++ AR V D + +
Sbjct: 534 TACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKP- 592
Query: 143 NVAVWNTMVAGYAKVGDLN----NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
VW ++AG G+++ A LF+LM + N ++ L YA + + NE +
Sbjct: 593 GAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ-NDGTYVLLSNIYADVGRWNEVAKVR 651
Query: 199 RRMQVENVKPD 209
+ M+ + V+ +
Sbjct: 652 KLMRDQAVRKE 662
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 286/510 (56%), Gaps = 73/510 (14%)
Query: 15 RFIDSCSSLGFSDYAYSIFTHKSKPDVYLY--------NTTIKALCQTDNPLNAVILYNK 66
RF+ SLG +F ++P +L+ N T+K Q+ N + V+L+ +
Sbjct: 2 RFLRRFPSLG--RRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSN-TSKVLLFFR 58
Query: 67 I--QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
I + + D++S F LKA S++ G+++H + G + + + +LI MY++
Sbjct: 59 ILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSA- 117
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G++ +A +F+ + KN+ISWT++I+
Sbjct: 118 --------------------------------TGNVADAHNMFDEIPSKNLISWTSVISA 145
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y +PN+A+ LFR+MQ+++V+PD + + ALSACA LGA+++GEWIH YI GL+T
Sbjct: 146 YVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTD 205
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-- 302
+ LNN+LI+MY+K G+IG A ++F+ + K V TWT+MI G ALHG EAL +F+ M
Sbjct: 206 LCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKE 265
Query: 303 --ERAR------------VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+RAR V PN++TF+ +L AC H GLVE G+++F MK Y + P+I
Sbjct: 266 TNKRARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRIS 325
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD--------VELGEC 400
+GCM+DLL RAG L EA + + +MP NA +W +LL A ++ GD +++
Sbjct: 326 HFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIYSE 385
Query: 401 ALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVH 460
A + L++LEP + G+ I+SN+YA G W++ +R ++ ++ PGCS IEV +
Sbjct: 386 ARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQ---RRDPGCSSIEVGIDIK 442
Query: 461 EFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
EFVA D HP ++Y+IL + M+ ++
Sbjct: 443 EFVAADDQHPCMPQIYEILDHLTRTMRASD 472
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 19/281 (6%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
L + I S+ G A+++F ++ + + I A P A+ L+ ++Q
Sbjct: 107 LQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDD 166
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
++PD + L A L +++G IH GLD+D+ + +LI MY+ C I AR
Sbjct: 167 VQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR 226
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
++FD + +V W +M+ G+A G A LF M E N A+ ++
Sbjct: 227 RLFDGTQKK--DVTTWTSMIVGHALHGQAEEALQLFTEMKETN---------KRARKNKR 275
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNA 250
N + V P+++ + L AC+ G VE G + + E Y L +
Sbjct: 276 NG------EHESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 329
Query: 251 LIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
++D+ ++G + +A + M + + W T++ +L G
Sbjct: 330 MVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQG 370
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 278/479 (58%), Gaps = 20/479 (4%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
Y S+F S + N ++ L +PL + L+ ++ R + +SF F+L ++
Sbjct: 78 SYPLSLFRCASCASAFASNHLLRVL---PHPL-PLRLFPRLP----RRNPHSFTFLLASL 129
Query: 87 -----------VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
V +++ +G +H V G D++V ALI Y C + RKVFD
Sbjct: 130 SNHLDADPAVAVSIASRLMGAHVHALAVKAGAAGDLYVRNALIHFYGVCGDVAAMRKVFD 189
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
EL L V +V WN ++AGY + G + AR +F+ M ++ +SW+T++ GY + + A+
Sbjct: 190 ELPL-VRDVVTWNAVLAGYVRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVAL 248
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F+ M V+ VK +E A++ ALSA AQLG +E G+++H I++ G+ + L AL+DMY
Sbjct: 249 GVFKNMVVQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMY 308
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
+K G + A +VF+ M + V W +MI GLA HGLG +A+ +F + P ITF+
Sbjct: 309 SKCGSVAAAKEVFDAMPWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFV 368
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L+AC GLV+ GR YF +M +YGIE ++E YGCM+DLL RAG +QEA +L+ M
Sbjct: 369 GVLNACSRTGLVDEGRWYFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHI 428
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ +WG++L+A +G V+LG LI+L+P + G Y +L++IYA +W+E K+
Sbjct: 429 PPDPVLWGTVLSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKV 488
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
RK+M + G K G S +E VH+F+ GD H D ++Y +LC I+ ++ A ++ +
Sbjct: 489 RKLMSNRGTSKSAGWSLMEAHGIVHKFLVGDMDHKDSVQIYNMLCMIDRRLAEAGYVPD 547
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+VR + N +L+ ++ + G A +F D ++T + + A+
Sbjct: 193 LVRDVVTWNAVLAGYVRA----GMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVAL 248
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
++ + ++ + + L A +L +E G+ +H G+ +++ AAL+ MY
Sbjct: 249 GVFKNMVVQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMY 308
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ C + A++VFD + R +V WN+M+ G A G
Sbjct: 309 SKCGSVAAAKEVFDAMPWR--DVFAWNSMICGLATHG----------------------- 343
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYG 240
++A+ LF + E P I + L+AC++ G V+ G W + E+YG
Sbjct: 344 --------LGHDAVQLFEKFVSEGFCPTNITFVGVLNACSRTGLVDEGRWYFKLMAEKYG 395
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
+ + + ++D+ +++G + +A+++ E M + W T+++ HGL
Sbjct: 396 IESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIPPDPVLWGTVLSACKRHGL 447
>gi|356567046|ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 271/496 (54%), Gaps = 45/496 (9%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
V GL Q+ +LS + CS + +A S H + P +N I+ +D+PL A
Sbjct: 41 VSGLYQDTRVLSELVYFCSLSPSKNLRHARSFVHHAATPSPISWNILIRGYAASDSPLEA 100
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++ K++ P+ +FPF+LK+ S + G+++H V GLDSDV+V LI
Sbjct: 101 FWVFRKMRERGAMPNKLTFPFLLKSCAVASALFEGKQVHADAVKCGLDSDVYVGNNLINF 160
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y CK I DARK +F M E+ V+SW +
Sbjct: 161 YGCCKKIVDARK---------------------------------VFGEMPERTVVSWNS 187
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
++ + + I F RM +PDE +M+ LSACA+LG + LG W+H+ + G
Sbjct: 188 VMTACVESLWLGDGIGYFFRMWGCGFEPDETSMVLLLSACAELGYLSLGRWVHSQLVLRG 247
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V L AL+DMY KSG +G A VFE M+N++V TW+ MI GLA HG G EAL++F+
Sbjct: 248 MVLSVQLGTALVDMYGKSGALGYARDVFERMENRNVWTWSAMILGLAQHGFGEEALELFA 307
Query: 301 RMERAR-----VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
M ++PN +T++ +L AC H G+V+ G +YF+ M+ +GI+P + YG M+D
Sbjct: 308 IMNNNNNDNRDIRPNYVTYLGVLCACSHAGMVDEGYQYFHDMECVHGIKPLMTHYGAMVD 367
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE----LGECALQHLIKLEPH 411
+LGRAG L+EA + ++ MP E + +W +LL+A ++ DV +GE + L+ EP
Sbjct: 368 VLGRAGRLEEAYEFIQSMPIEPDPVVWRTLLSACTVH-DVHDHTGIGERVSKKLLLKEPR 426
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
GN I++N+YA +G W E+ +R+VMRD G+KK+ G S +++ +H F AG PD
Sbjct: 427 RGGNLVIVANMYAEVGMWEEAANVRRVMRDGGMKKVAGESCVDLGGSMHRFFAGYDPCPD 486
Query: 472 FDRLYQILCKINGQMK 487
+Y +L +N +K
Sbjct: 487 LVPVYHLLDGLNLHLK 502
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 265/472 (56%), Gaps = 34/472 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D S G + A +F + + +TI A + +A+ L++++Q+ +RPD
Sbjct: 612 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPD 671
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
Y+ ++ A S+++ GR++H + G+ S++ V ALI MY
Sbjct: 672 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMY-------------- 717
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
AK G + AR +F + K+++SW T+I GY+Q PNEA+
Sbjct: 718 -------------------AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEAL 758
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF MQ + KPD+I M L ACA L A++ G IH +I + G + + + AL+DMY
Sbjct: 759 ELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMY 817
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + A +F+ + K +I+WT MIAG +HG G EA+ F+ M A ++P+E +F
Sbjct: 818 AKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFS 877
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
IL+AC H GL+ G ++FN M++ G+EPK+E Y C++DLL R G L +A K + MP
Sbjct: 878 VILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPI 937
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ + IWG LL+ I+ DV+L E +H+ +LEP N+ Y +L+N+YA +W E K+
Sbjct: 938 KPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKL 997
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
RK M+ G K+ PGCS+IEV + + FVAG++ HP R+ +L K+ QM+
Sbjct: 998 RKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQ 1049
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 212/440 (48%), Gaps = 41/440 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G N +++ I + G + A+++F S+PDV +N+ I N + ++
Sbjct: 500 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF 559
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ + D + VL A + + LGR +H G G+
Sbjct: 560 IQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALH----GFGV----------------- 598
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ F E V NT++ Y+K G+LN A +F M + ++SWT+ IA
Sbjct: 599 ------KACFSE------EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAA 646
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + ++AI LF MQ + V+PD + + + ACA +++ G +H+Y+ + G+ +
Sbjct: 647 YVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 706
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+P+ NALI+MYAK G + +A VF + K +++W TMI G + + L EAL++F M++
Sbjct: 707 LPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK 766
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ KP++IT +L AC + ++ GR + +I+ R G + ++D+ + G L
Sbjct: 767 -QFKPDDITMACVLPACAGLAALDKGREIHGHIL--RRGYFSDLHVACALVDMYAKCGLL 823
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNI--YGDVELGECALQHLIKLEPHNSGNYAILSN 421
A+ L +P + + W ++A + +G+ + + +EP S +++++ N
Sbjct: 824 VLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDES-SFSVILN 881
Query: 422 IYAILGRWNESGKIRKVMRD 441
+ G NE K MR+
Sbjct: 882 ACSHSGLLNEGWKFFNSMRN 901
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 166/370 (44%), Gaps = 47/370 (12%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C S F++ +S+ ++ N I C+ + NA+ L K ++ L ++Y
Sbjct: 323 CVSPSFTNTTHSVTQNQ--------NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCS 374
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
VL+ + ++E G+ +H + G+ D + A L+ MY +C + RK+FD++
Sbjct: 375 --VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMN 432
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
V +WN +++ YAK+G+ E+++LF+
Sbjct: 433 D--KVFLWNLLMSEYAKIGNF-------------------------------RESVSLFK 459
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+MQ V + L A LG V+ + +H Y+ + G + + N+LI Y K G
Sbjct: 460 KMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFG 519
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A +F+ + V++W +MI G ++G L++F +M V+ + T +++L
Sbjct: 520 GVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLV 579
Query: 320 ACCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
A ++G + LGR +K+ + E ++D+ + G L A ++ +M +
Sbjct: 580 AWANIGNLSLGRALHGFGVKACFSEEVVFSNT--LLDMYSKCGNLNGATEVFVKMG-DTT 636
Query: 379 AAIWGSLLAA 388
W S +AA
Sbjct: 637 IVSWTSTIAA 646
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 261/432 (60%), Gaps = 10/432 (2%)
Query: 64 YNKIQASALRPDNYSFPFVLKAV----VKLSTIELGREIHCQTVGTGLDSDVHVVA---- 115
+ ++ + ++ D Y++ ++ A K+ GR++H + T ++ H V
Sbjct: 271 FRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNN 330
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI Y + +AR+VFD++ +R ++ WN +++GY + A ++F M E+NV
Sbjct: 331 ALITFYTKYDRMIEARRVFDKMPVR--DIISWNAVLSGYVNAQRIEEANSIFSEMPERNV 388
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++WT +I+G AQ E + LF +M+ E ++P + A A++AC+ LG+++ G+ IH+
Sbjct: 389 LTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQ 448
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + G ++ + NALI MY++ G + A VF M ++W MIA LA HG G +A
Sbjct: 449 VIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKA 508
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+++F +M + + P+ ITF+ IL+AC H GL++ GR YF+ M +RYGI P + Y +ID
Sbjct: 509 IELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLID 568
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LL RAG +A+ +++ MPFEA A IW +LLA I+G++ELG A L++L P G
Sbjct: 569 LLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGT 628
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y ILSN+YA LG+W+E ++R +MR+ GVKK PGCS++EV VH F+ D HP+ +
Sbjct: 629 YIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAV 688
Query: 476 YQILCKINGQMK 487
Y L ++ +MK
Sbjct: 689 YTYLQQLVNEMK 700
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 208/476 (43%), Gaps = 86/476 (18%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN--- 56
++ G N +L+R I+ C S + YA +F KPD+ T + A + N
Sbjct: 31 ILTSGFKPNTFILNRLINIYCKSSNIT-YARKLFDKIPKPDIVARTTLLSAYSSSGNVKL 89
Query: 57 --------PL--------NAVI--------------LYNKIQASALRPDNYSFPFVLKAV 86
PL NA+I L+ +++ PD ++F VL A+
Sbjct: 90 AQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSAL 149
Query: 87 VKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASC---------KCIYDARKVFDE 136
++ E + +HC+ + G V AL+ Y C + + ARKVFDE
Sbjct: 150 SLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDE 209
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
W TM+AGY + DL AR L + +T ++W +I+GY + EA
Sbjct: 210 TPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFD 269
Query: 197 LFRRMQVENVKPDEIAMLAALSACA----QLGAVELGEWIHNYIEQYGLNT----IVPLN 248
FRRM ++ DE + +SAC ++G G +H YI + + ++ +N
Sbjct: 270 TFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVN 329
Query: 249 NALIDMYAK-------------------------------SGKIGKALQVFENMKNKSVI 277
NALI Y K + +I +A +F M ++V+
Sbjct: 330 NALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVL 389
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
TWT MI+GLA +G G E L +F++M+ ++P + F ++AC +G ++ G++ + +
Sbjct: 390 TWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQV 449
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
R G + + +I + R G ++ AE + MP+ ++ W +++AA +G
Sbjct: 450 -IRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAALAQHG 503
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N +LS ++++ + A SIF+ + +V + I L Q
Sbjct: 352 MPVRDIISWNAVLSGYVNAQRI----EEANSIFSEMPERNVLTWTVMISGLAQNGFGEEG 407
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+N++++ L P +Y+F + A L +++ G++IH Q + G DS + ALI M
Sbjct: 408 LKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITM 467
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + A VF L++ + WN M+A A+ G
Sbjct: 468 YSRCGVVESAESVF--LTMPYVDSVSWNAMIAALAQHG---------------------- 503
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
+AI LF +M E++ PD I L L+AC G ++ G + +Y
Sbjct: 504 ---------HGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRY 554
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG---LGREA 295
G+ LID+ ++G KA V ++M ++ W ++AG +HG LG +A
Sbjct: 555 GITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQA 614
Query: 296 LD 297
D
Sbjct: 615 AD 616
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 152/352 (43%), Gaps = 57/352 (16%)
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
+T + R +H + +G + ++ LI +Y I ARK+FD++ ++ T
Sbjct: 19 TTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKP--DIVARTT 76
Query: 150 MVAGYAKVGDLNNARALFEL--MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+++ Y+ G++ A+ LF +T ++ +S+ +I Y+ + + A+ LF +M+
Sbjct: 77 LLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFL 136
Query: 208 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMY--------AKS 258
PD + LSA + + E + +H + + G I + NAL+ Y KS
Sbjct: 137 PDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKS 196
Query: 259 GKI-GKALQVFENMKNKSVI--TWTTMIAGLALH-------------------------- 289
++ A +VF+ + +WTTMIAG +
Sbjct: 197 SQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMIS 256
Query: 290 -----GLGREALDMFSRMERARVKPNEITFIAILSAC--CH--VGLVELGRRYFNIMKSR 340
GL EA D F RM ++ +E T+ +++SAC C+ +G+ GR+ + R
Sbjct: 257 GYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYIL-R 315
Query: 341 YGIEPK----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+EP + +I + + EA ++ +MP + W ++L+
Sbjct: 316 TVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSG 366
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 15/212 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL N L++ + S G + A S+F D +N I AL Q + + A+ L+
Sbjct: 457 GLSAGNALITMY----SRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELF 512
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGR---EIHCQTVGTGLDSDVHVVAALIQMY 121
++ + PD +F +L A I+ GR + C G D + A LI +
Sbjct: 513 EQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHY--ARLIDLL 570
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL----NNARALFELMTEKNVIS 177
A+ V + +W ++AG G++ A L EL+ ++ +
Sbjct: 571 CRAGMFLKAQSVIKSMPFEA-GAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDG-T 628
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+ L YA + Q +E + M+ VK +
Sbjct: 629 YIILSNMYAALGQWDEVARVRLLMRERGVKKE 660
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 277/506 (54%), Gaps = 42/506 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G ++ LL++ + + G Y +F S PD +L+N+ IKA + L+A
Sbjct: 33 LVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDA 92
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V+ Y ++ S + P Y+F V+KA LS + +G +H +G SD V AALI
Sbjct: 93 VLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAF 152
Query: 121 YA-SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA SC + RV AR +F+ M ++++++W
Sbjct: 153 YAKSC-------------TPRV---------------------ARKVFDEMPQRSIVAWN 178
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++I+GY Q NEA+ +F +M+ V+PD ++ LSAC+QLG+++ G W+H+ I
Sbjct: 179 SMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGS 238
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G+ V L +L++M+++ G +G+A VF +M +V+ WT MI+G +HG G EA+++F
Sbjct: 239 GITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVF 298
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
RM+ V PN +TF+A+LSAC H GL++ GR F MK YG+ P +E + CM+D+ GR
Sbjct: 299 HRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGR 358
Query: 360 AGYLQEAEKLLRRM-PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
G L EA + ++ + E A+W ++L A ++ + +LG ++LI EP N G+Y +
Sbjct: 359 GGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVL 418
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSN+YA+ GR + +R VM G+KK G S I+V R + F GD SHP+ + +Y
Sbjct: 419 LSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCF 478
Query: 479 L------CKINGQMKFAEHLQNEFSG 498
L CK G E +E G
Sbjct: 479 LDELIWRCKDAGYAPVPESAMHELEG 504
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 278/490 (56%), Gaps = 41/490 (8%)
Query: 2 IVRGLDQNNHL-LSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPL 58
I++ QN+ L L + SC + +Y+ +F+ PD YNT I++ + P
Sbjct: 11 IIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSRF-FPS 69
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+++ + ++++ + DN++FPFVLKA +L ++ +H V GLDSD+ V ALI
Sbjct: 70 HSLFYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVKYGLDSDIFVQNALI 126
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y C + A KVFDE+S R + W+T++A + LNN
Sbjct: 127 CVYGYCGSLEMAVKVFDEMSER--DSVSWSTVIASF-----LNN---------------- 163
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
GYA +EA+ LF +MQ+E+ V PDE+ ML+ +SA + LG +ELG W+ +I
Sbjct: 164 -----GYA-----SEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIG 213
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ GL V L ALIDM+++ G I +++ VFE M ++V+TWT +I GL +HG EAL
Sbjct: 214 RLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALA 273
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF M ++ V+P+ +TF +L AC H GLV+ G F ++ Y ++P ++ YGCM+D+L
Sbjct: 274 MFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDIL 333
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L EA + RMP + N+ IW +LL A + ++ L E + K+ +G+
Sbjct: 334 GRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLV 393
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSN+Y GRW E IR MR+ + K PGCS I V + +HEFV+GD SHP + + +
Sbjct: 394 LLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITK 453
Query: 478 ILCKINGQMK 487
L I G ++
Sbjct: 454 FLSSIIGDLR 463
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 256/462 (55%), Gaps = 33/462 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F SK + + I A +N V L+ K+ + P+ + ++K
Sbjct: 280 YARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECG 339
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ELG+ +H T+ G + + A I MY C
Sbjct: 340 TAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKC----------------------- 376
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
GD+ +AR++F+ K+++ W+ +I+ YAQ + +EA +F M ++
Sbjct: 377 ----------GDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIR 426
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+E M++ L CA+ G++E+G+WIH+YI++ G+ + L + +DMYA G I A ++
Sbjct: 427 PNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRL 486
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F ++ + W MI+G A+HG G AL++F ME V PN+ITFI L AC H GL+
Sbjct: 487 FAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLL 546
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G+R F+ M +G PK+E YGCM+DLLGRAG L EA +L++ MP N A++GS LA
Sbjct: 547 QEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLA 606
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A ++ +++LGE A + + LEPH SG ++SNIYA RW + IR+ M+D G+ K
Sbjct: 607 ACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKE 666
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
PG S IEV+ +HEF+ GD HPD ++Y+++ ++ +++ A
Sbjct: 667 PGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDA 708
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 181/385 (47%), Gaps = 39/385 (10%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L++ L FI + S+ + ++ ++ S ++ + I + + + P +A +Y
Sbjct: 56 LNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAIHSF--LITSYIKNNCPADAAKIYA 113
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
++ + DN+ P VLKA + + LG+E+H V G DV V ALI MY+
Sbjct: 114 YMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYS--- 170
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+VG L AR LF+ + K+V+SW+T+I Y
Sbjct: 171 ------------------------------EVGSLALARLLFDKIENKDVVSWSTMIRSY 200
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL--NT 243
+ +EA+ L R M V VKP EI M++ A+L ++LG+ +H Y+ + G +
Sbjct: 201 DRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKS 260
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
VPL ALIDMY K + A +VF+ + S+I+WT MIA E + +F +M
Sbjct: 261 GVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKML 320
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ PNEIT ++++ C G +ELG + + R G + ID+ G+ G +
Sbjct: 321 GEGMFPNEITMLSLVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDV 379
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAA 388
+ A + + +W +++++
Sbjct: 380 RSARSVFDSFK-SKDLMMWSAMISS 403
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 263/468 (56%), Gaps = 37/468 (7%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C SL + A +F D+ + + I Q D +A++L+ ++ + P+ ++
Sbjct: 122 CGSL---EGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTL 178
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
++K +++ GR+IH G S+V V ++L+ MY
Sbjct: 179 SSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMY------------------ 220
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
A+ G L A +F+ + KN +SW LIAGYA+ + EA+ LF
Sbjct: 221 ---------------ARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFV 265
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
RMQ E +P E A LS+C+ +G +E G+W+H ++ + + + N L+ MYAKSG
Sbjct: 266 RMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSG 325
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
I A +VF+ + V++ +M+ G A HGLG+EA F M R ++PN+ITF+++L+
Sbjct: 326 SIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLT 385
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H L++ G+ YF +M+ +Y IEPK+ Y ++DLLGRAG L +A+ + MP E
Sbjct: 386 ACSHARLLDEGKHYFGLMR-KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTV 444
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
AIWG+LL AS ++ + E+G A Q + +L+P G + +L+NIYA GRW + K+RK+M
Sbjct: 445 AIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIM 504
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+D GVKK P CS++EV VH FVA D +HP ++++++ K+N ++K
Sbjct: 505 KDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIK 552
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 163/310 (52%), Gaps = 40/310 (12%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
I +L PD + +LK +L ++ G+ +H + + D+
Sbjct: 65 IDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDL--------------- 109
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ N+++ YA+ G L AR LF+ M ++++SWT++I GYA
Sbjct: 110 ------------------VIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYA 151
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
Q D+ ++A+ LF RM + +P+E + + + C + + G IH +YG ++ V
Sbjct: 152 QNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVF 211
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ ++L+DMYA+ G +G+A+ VF+ + K+ ++W +IAG A G G EAL +F RM+R
Sbjct: 212 VGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREG 271
Query: 307 VKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYL 363
+P E T+ A+LS+C +G +E G+ + ++MKS K+ Y ++ + ++G +
Sbjct: 272 YRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS----SQKLVGYVGNTLLHMYAKSGSI 327
Query: 364 QEAEKLLRRM 373
++AEK+ ++
Sbjct: 328 RDAEKVFDKL 337
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 105/205 (51%), Gaps = 5/205 (2%)
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+++PD L C QLG ++ G+ +H ++ + + N+L+ MYA+ G + A
Sbjct: 69 SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
++F+ M ++ +++WT+MI G A + +AL +F RM +PNE T +++ C ++
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GR+ + +YG + ++D+ R GYL EA + ++ + N W +
Sbjct: 189 ASYNCGRQ-IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK-NEVSWNA 246
Query: 385 LLAASNIYGDVELGECALQHLIKLE 409
L+A G+ GE AL ++++
Sbjct: 247 LIAGYARKGE---GEEALALFVRMQ 268
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 116/286 (40%), Gaps = 34/286 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G N + S +D + G+ A +F + +N I + A+ L+
Sbjct: 205 GCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALF 264
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q RP +++ +L + + +E G+ +H + + +V L+ MYA
Sbjct: 265 VRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKS 324
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I DA KVFD+L ++V +V N+M+ GYA+ G
Sbjct: 325 GSIRDAEKVFDKL-VKV-DVVSCNSMLIGYAQHG-------------------------- 356
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
EA F M ++P++I L+ L+AC+ ++ G+ + +Y +
Sbjct: 357 -----LGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPK 411
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
V ++D+ ++G + +A E M +V W ++ +H
Sbjct: 412 VSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 273/489 (55%), Gaps = 39/489 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G DQ+ L ++ I S LG DYA +F K +Y++N +AL + + LY
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 65 NKIQASALRPDNYSFPFVLKAVV----KLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
K+ + D +++ +VLKA V + G+EIH G +S V+++ L+ M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDM 226
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C+ A VF+ + +R NV W+ M+A YAK N +A
Sbjct: 227 YARFGCVDYASYVFNGMPVR--NVVSWSAMIACYAK-----NGKAF-------------- 265
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE--NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
EA+ FR M E + P+ + M++ L ACA L A+E G IH YI +
Sbjct: 266 ------------EALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILR 313
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL++I+P+ +AL+ MY + GK+ +VF+ M ++ V++W ++I+ +HG GR+A+ +
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQI 373
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M P +TF+++L AC H GLVE G+R F M +GI+P++E Y CM+DLLG
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLG 433
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RA L EA K+++ M E +WGSLL + I+G+VEL E A + L LEP N+GNY +
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L++IYA W+E +++K++ G++K+PG ++EV ++++ FV+ D +P ++++
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAF 553
Query: 479 LCKINGQMK 487
L K+ MK
Sbjct: 554 LVKLAEDMK 562
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 6/192 (3%)
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
R+ + P + + C ++ G +H +I G + L LI MY+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A +VF+ + +++ W + L L G G E L ++ +M R V+ + T+ +L
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 320 AC----CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
AC C + G+ + +R G + ++D+ R G + A + MP
Sbjct: 187 ACVASECTADHLTKGKE-IHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPV 245
Query: 376 EANAAIWGSLLA 387
N W +++A
Sbjct: 246 R-NVVSWSAMIA 256
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 270/537 (50%), Gaps = 82/537 (15%)
Query: 27 DYAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
++A SIF+ + +V+ +N I P Y K++ + PD ++FP +KA
Sbjct: 9 NFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKA 68
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ + I ++IH GL+ DV + +AL+ Y + A+ F+EL +R +V
Sbjct: 69 CLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR--DVV 123
Query: 146 VWNTMVAGYAKV-----------------------------------GDLNNAR------ 164
+WN MV GYA++ GDLNN R
Sbjct: 124 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFA 183
Query: 165 -----------------------------ALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+FE+M EK++ SW ++ + + Q + +
Sbjct: 184 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTL 243
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI------VPLNN 249
L RM ++PD + + L AC+ L A+ G IH Y+ GL V L N
Sbjct: 244 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKN 303
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
A+IDMYAK G + A VFE M NK V +W MI G +HG G EAL+MFSRM ++KP
Sbjct: 304 AVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKP 363
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+E+TF+ +LSAC H G V GR + MKS+Y + P IE Y C+ID+LGRAG L EA +L
Sbjct: 364 DEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYEL 423
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
MP EAN +W +LLAA ++ L E A Q + +LEP + G+Y ++SN+Y +GR+
Sbjct: 424 ALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRY 483
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
E ++R MR V+K PGCS+IE+ VH FV+ D +HP+ +Y L + ++
Sbjct: 484 EEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSLTARL 540
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 35/290 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + + ID + A IF + D++ +N+ Q + + L
Sbjct: 187 GYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLL 246
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + ++PD + VL A L+ + GREIH + +GL D
Sbjct: 247 DRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD-------------- 292
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
K D++ L+ N ++ YAK G + +A +FE M K+V SW +I G
Sbjct: 293 ------GKDIDDVLLK-------NAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMG 339
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YG 240
Y NEA+ +F RM +KPDE+ + LSAC+ G V G N++ Q Y
Sbjct: 340 YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR---NFLAQMKSKYD 396
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ + +IDM ++G++ +A ++ M + + W ++A LH
Sbjct: 397 VAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 446
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 154 YAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
Y+K +N A ++F T E NV ++ +I+G+ P E +++M+ E V PD+
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFT 61
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
A+ AC L +E+ + IH + ++GL V + +AL++ Y K G + A FE +
Sbjct: 62 FPCAIKAC--LDVLEIKK-IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 118
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+ V+ W M+ G A G L+ F RM V P+ T ILS +G + G R
Sbjct: 119 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG-R 177
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+ + G + + +ID+ G+ +++A ++ M E + W S+ +
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR-EKDIFSWNSIXSVHEQC 236
Query: 393 GD 394
GD
Sbjct: 237 GD 238
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 249/459 (54%), Gaps = 33/459 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + D +N I A Q N + + + S + PD++++ VLKA
Sbjct: 437 ASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAG 496
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ G EIH + + +G+ D V AAL+ MY C I A K+ D
Sbjct: 497 RQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTE---------- 546
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+K ++SW +I+G++ + Q +A F RM V P
Sbjct: 547 -----------------------QKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D A L CA L V LG+ IH I + L + V + + L+DMY+K G + + +F
Sbjct: 584 DNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMF 643
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E N+ +TW M+ G A HGLG EAL +F M+ VKPN TF+++L AC H+GLV+
Sbjct: 644 EKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVD 703
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G YF++M S YG++P+ E Y CM+D+LGR+G + EA L+++MPFEA+A IW +LL+
Sbjct: 704 KGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSV 763
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I+G+VE+ E A + L++L+P +S +LSNIYA G W ++RK+MR +KK P
Sbjct: 764 CKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEP 823
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
GCS+IE+ VH F+ GD HP + +Y+ L + G+M+
Sbjct: 824 GCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQ 862
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 181/355 (50%), Gaps = 23/355 (6%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ L FS +A +F K P + N + A QT P KI+ +F
Sbjct: 12 TRLFFSYHAIPLF--KKIPPIPTNNFSTLAQNQTQPPA-------KIR---------TFS 53
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+ + K +++ G++ H + + G + V L+QMY C + A KVFD++ LR
Sbjct: 54 HIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLR 113
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+V +N++++GYA G+++ AR F M E++V+SW ++I+G+ Q + ++I +F
Sbjct: 114 --DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLE 171
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M V D ++ L AC L ++G +H + ++G + V +AL+ MYAK +
Sbjct: 172 MGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKR 231
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ +L VF + K+ ++W+ MIAG + E L++F M+ V ++ + ++ +
Sbjct: 232 LDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRS 291
Query: 321 CCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
C + + LG+ + + +KS +G + + +D+ + G + +A+K+L MP
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGT--ATLDMYAKCGRMADAQKVLSSMP 344
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 201/476 (42%), Gaps = 57/476 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +R + N ++S + +S G D A F + DV +N+ I Q +
Sbjct: 110 MYLRDVVSYNSIISGY----ASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKS 165
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ ++ + D S VLKA L ++G ++H V G D DV +AL+ M
Sbjct: 166 IDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGM 225
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA CK + D+ VF EL + W +SW+
Sbjct: 226 YAKCKRLDDSLSVFSELPEKNW---------------------------------VSWSA 252
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+IAG Q D+ E + LF+ MQ V + + +CA L A+ LG+ +H++ +
Sbjct: 253 MIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSA 312
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + + A +DMYAK G++ A +V +M S+ ++ +I G A G +AL F
Sbjct: 313 FGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQ 372
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+ + + +EIT L+AC + GR+ + + I ++D+ G+
Sbjct: 373 LLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMS-NICVANAILDMYGKC 431
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI--KLEPHNSGNYAI 418
L EA L M +A W +++AA G+ E +I ++EP ++
Sbjct: 432 KALAEASDLFDMME-RRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPD---DFTY 487
Query: 419 LSNIYAILGR--WNESGKI--RKVMRDMGVKKMPG---------CSYIEVSKRVHE 461
S + A GR N +I R + MG G C IE + ++H+
Sbjct: 488 GSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHD 543
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 161/325 (49%), Gaps = 18/325 (5%)
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKV--FDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
TGL D ++ + AS + + R+V S+ + N+ V N ++ Y K L
Sbjct: 377 TGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAE 436
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
A LF++M ++ +SW +IA Q E + F M ++PD+ + L ACA
Sbjct: 437 ASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAG 496
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
A+ G IH I + G+ + AL+DMY K G I KA ++ + + K++++W +
Sbjct: 497 RQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAI 556
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRY 341
I+G +L +A FSRM V P+ T+ A+L C ++ V LG++ + I+K
Sbjct: 557 ISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ-- 614
Query: 342 GIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
E + + Y C ++D+ + G +Q+++ + + P + W ++L +G LGE
Sbjct: 615 --ELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-NRDFVTWNAMLCGYAHHG---LGE 668
Query: 400 CALQ-----HLIKLEPHNSGNYAIL 419
AL+ L+ ++P+++ ++L
Sbjct: 669 EALKLFESMQLVNVKPNHATFVSVL 693
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G+ ++ + + +D G + A I + + +N I +A
Sbjct: 510 IIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDA 569
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++++ + PDN+++ VL L+T+ LG++IH Q + L SDV++ + L+ M
Sbjct: 570 HKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDM 629
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + D++ +F++ R + WN M+ GYA G
Sbjct: 630 YSKCGNMQDSQLMFEKAPNR--DFVTWNAMLCGYAHHG---------------------- 665
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
EA+ LF MQ+ NVKP+ ++ L ACA +G V+ G + + +Y
Sbjct: 666 ---------LGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEY 716
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
GL+ + ++D+ +SG+I +AL + + M ++ + W +++ +HG
Sbjct: 717 GLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHG 768
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 270/476 (56%), Gaps = 3/476 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ N+ ++S +D D A +F ++ L N + A+ +
Sbjct: 265 GIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVL 324
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + S +RPD S + + +L I G+ H + G +S ++ ALI MY C
Sbjct: 325 NLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 384
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
A ++FD +S + V WN++VAGY + G+++ A F M EKN++SW T+I+
Sbjct: 385 HRQDTAFRIFDRMSNKT--VVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISA 442
Query: 185 YAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
Q + EAI +F MQ E V D + M++ SAC LGA++L +WI+ YIE+ +
Sbjct: 443 LVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQL 502
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V L L+DM+++ G A+ +F ++ N+ V WT I +A+ G A+++F+ M
Sbjct: 503 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMI 562
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP+ + FI L+ACCH GLV+ G+ FN M+ +G+ P+ YGCM+DLLGRAG L
Sbjct: 563 EQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLL 622
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA +L++ MP E N IW SLLAA + G+VE+ A + + L P +G+Y +LSN+Y
Sbjct: 623 EEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVY 682
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
A GRWN+ K+R M++ G++K PG S I++ + HEF +GD SHP+ ++ +L
Sbjct: 683 ASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAML 738
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 196/399 (49%), Gaps = 42/399 (10%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLN 59
+GLD + +++ + LG + +A +F + +S ++YN+ I+ +
Sbjct: 57 QGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKE 116
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A++L+ ++ S + PD Y+FPF L K G +IH GL +I+
Sbjct: 117 AILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIH------GL---------IIK 161
Query: 120 M-YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
M YA ++ V N++V YA+ G+L+ AR +F+ M+E+NV+SW
Sbjct: 162 MDYAK-------------------DLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSW 202
Query: 179 TTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
T++I GYA+ + +A+ LF RM + E+V P+ + M+ +SACA+L +E GE ++++I
Sbjct: 203 TSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIR 262
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
G+ + +AL+DMY K I A ++F+ ++ M + GL +EAL
Sbjct: 263 DSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALG 322
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+ + M + ++P+ I+ ++ +S+C + + G+ + R G E +ID+
Sbjct: 323 VLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVL-RNGFESWDNICNALIDMY 381
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ A ++ RM W S++A G+V+
Sbjct: 382 MKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYIENGEVD 419
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 267/476 (56%), Gaps = 62/476 (13%)
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
R D++++ F++KA+ + R +H V G D V ALI Y+ DARK
Sbjct: 3 RRDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARK 61
Query: 133 V-------------------------------FDELSLR---VWN--------------- 143
V FDE+ + WN
Sbjct: 62 VFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAA 121
Query: 144 -----------VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
V W+TMV+GY K GDL AR +F+ M KN+++WT +++ AQ +
Sbjct: 122 FELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVD 181
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA LF +M+ +V+ D A+++ L+ACA+ G++ LG+ IH Y+ + L + NALI
Sbjct: 182 EAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALI 241
Query: 253 DMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
DM+ K G + +A VF+ K ++W ++I G A+HG G +AL++F++M++ P+
Sbjct: 242 DMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDA 301
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+T I +LSAC H+G V+ GRR+F+ M+ YGI P+IE YGCMIDLLGR G ++EA L++
Sbjct: 302 VTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIK 361
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP+E N IWGSLL+A ++ +VE E A+ L KL+P N+GNYA+LSNIYA G+W++
Sbjct: 362 SMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSD 421
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K R M+ G +K G S++E+++ HEF GD H D D++ +++ +++ +K
Sbjct: 422 MAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 477
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 34/265 (12%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A IF ++ + + A Q A L+ +++ +++ D + +L A
Sbjct: 150 EMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAAC 209
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ ++ LG+ IH L HV ALI M+ C C+ A VFD +++ +V+
Sbjct: 210 AESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVS- 268
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN+++ G+A G ++A+ LF +M+ +
Sbjct: 269 WNSIIGGFAMHG-------------------------------HGDKALELFAQMKQQGF 297
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKAL 265
PD + M+ LSAC +G V+ G + +E+ YG+ + +ID+ + G I +A+
Sbjct: 298 NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAV 357
Query: 266 QVFENMK-NKSVITWTTMIAGLALH 289
+ ++M + + W ++++ LH
Sbjct: 358 DLIKSMPWEPNEVIWGSLLSACRLH 382
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 220/341 (64%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
N+ + N M+ Y K G A+ +F+ + ++++SWT +I G Q D P +++ LF M+
Sbjct: 236 NLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMR 295
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ PD I + + LSACA LG ++ G W+H YI Q G+ + + A++DMYAK G I
Sbjct: 296 TLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIE 355
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
AL++F +M ++ TW ++ GLA+HGL EAL++F M + VKPNEITF+AIL+ACC
Sbjct: 356 MALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACC 415
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLV+ GR+YF+ M Y + PK+E YGCMIDL RAG L+EA +L R MP + + IW
Sbjct: 416 HCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIW 475
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G LL A G++EL ++++L+ +SG + +LSNI AI RW+ ++R++M+D
Sbjct: 476 GLLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDR 535
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
GV+K PG S IEV + HEFV GD SH + +Y++L IN
Sbjct: 536 GVRKAPGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLIN 576
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 197/399 (49%), Gaps = 43/399 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSS-LGFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPL 58
++ GL ++ + S+ ++ ++ + + DYA ++ + +N+ I + P
Sbjct: 28 LVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLGSFPFNSLINGYVGGEFPQ 87
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
AV +Y ++ PD ++FP +LKA S GR++H V GL +D +V +LI
Sbjct: 88 MAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLI 147
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+ Y +C GD + A +F+ M ++V+SW
Sbjct: 148 RCYGAC---------------------------------GDFSCAGKVFDEMLVRDVVSW 174
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE- 237
+LI+G+ + +EAI++F RM VE P +++ L+ACA+ G + G+ IH IE
Sbjct: 175 NSLISGFMKAGHFDEAISVFFRMDVE---PSMTTLVSVLAACARNGDLCTGKGIHGVIER 231
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
++ +N + L NA++DMY K+G +A +F+ + + +++WT MI GL +++L+
Sbjct: 232 RFKVNLV--LGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLE 289
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+FS M + P+ I ++LSAC +G ++ G + R GI+ I ++D+
Sbjct: 290 LFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQR-GIKWDIHIGTAIVDMY 348
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G ++ A K+ M + N W +LL ++G V
Sbjct: 349 AKCGCIEMALKIFYSMS-QRNTFTWNALLCGLAMHGLVH 386
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 35/257 (13%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +IF D+ + I L Q+D+P ++ L++ ++ + PD VL A
Sbjct: 256 AKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACAS 315
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L T++ G +H G+ D+H+ A++ MYA C CI A K+F +S R N WN
Sbjct: 316 LGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQR--NTFTWN 373
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
++ G A G + +EA+ LF M + VKP
Sbjct: 374 ALLCGLAMHGLV-------------------------------HEALNLFEVMIISGVKP 402
Query: 209 DEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+EI LA L+AC G V+ G ++ N + Y L + +ID++ ++G + +A+++
Sbjct: 403 NEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVEL 462
Query: 268 FENMKNK-SVITWTTMI 283
M K V+ W ++
Sbjct: 463 ARTMPMKPDVLIWGLLL 479
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 285/509 (55%), Gaps = 23/509 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYL-YNTTIKALCQTDNPLN 59
++V G + L+ F+ S +S YA + + P L +N I+AL + P
Sbjct: 29 LVVSGRLASPSHLAAFLASLASSNHLSYARLVLPQR--PATLLAHNAFIRALARGPRPCL 86
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVV---------KLSTIELGREI-----HCQTVGT 105
A + + L PD+YS F+++A K + E+ + H V
Sbjct: 87 AFAAFRDLP---LPPDHYSLNFLVRAATALVASAAEEKHVSAEVNARLQAVSAHGAAVRW 143
Query: 106 GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARA 165
G +D HV + ++ MYA+ + +R F E++ +V MVA A GD++ AR
Sbjct: 144 GHAADPHVQSGVLSMYAALGDVASSRAAFAEIACP--DVVCVTAMVAALAAGGDVDAARD 201
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 225
LF+ M +++ ++W+ +IAGY + + EA+ LF M E +++ L+ACAQ+G
Sbjct: 202 LFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGT 261
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
++ G+W+H Y+ G+ + L AL+DMY+K G + A++VFE+M ++V TWT+ ++G
Sbjct: 262 LDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSG 321
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
LA++G+G E L +F RME A ++PN ++F+A+L C GLV+ GR F+ M +YG++P
Sbjct: 322 LAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM-DKYGVDP 380
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
E YGCM+DL GRAG L +A + MP E + +WG+LL AS I+ V+LG+ AL L
Sbjct: 381 WPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKL 440
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
+ +E N + LSNIYA W ++R +M+ GVKK+PG S IEV +VHEF G
Sbjct: 441 LAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVG 500
Query: 466 DTSHPDFDRLYQILCKINGQMKFAEHLQN 494
HP ++ + +L +++ +++ + N
Sbjct: 501 GRLHPRYNEIELMLAEMDRRLRLQGYTAN 529
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 257/461 (55%), Gaps = 33/461 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY +F + D +N I AL Q + + + N++ + PD++++ VLKA
Sbjct: 392 AYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAG 451
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++E G +H + + +GL D V + ++ MY CKC
Sbjct: 452 LQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMY--CKC---------------------- 487
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G + A+ L + + + ++SW ++I+G++ Q EA F M VKP
Sbjct: 488 ---------GMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKP 538
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D L CA L +ELG+ IH I + + +++ L+DMYAK G + +L +F
Sbjct: 539 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMF 598
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E + ++W MI G ALHG G EAL+MF RM++A V PN TF+A+L AC HVGL++
Sbjct: 599 EKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLD 658
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G RYF +M SRY +EP++E + CM+D+LGR+ QEA K +R MP EA+A IW +LL+
Sbjct: 659 DGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSI 718
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I DVE+ E A ++++L+P +S Y +LSN+YA G+W + + R++MR +KK P
Sbjct: 719 CKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEP 778
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
GCS+IEV +H F+AGD HP +Y++L + +MK +
Sbjct: 779 GCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLS 819
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 5/300 (1%)
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+S + L A S + G+ H + + +G V L+QMYA C AR VFD
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ R + WNTM+ YA GD A +LF M + +V+SW L++GY Q +++
Sbjct: 64 VMPHR--DTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSV 121
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L M V PD + L AC L + LG IH + GL V +AL+DMY
Sbjct: 122 GLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMY 181
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K + AL+ F M ++ ++W IAG + L++F +M+R + ++ +
Sbjct: 182 GKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYA 241
Query: 316 AILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
++ +C + + R+ + + +K+++ + + ++D+ +A L +A + +P
Sbjct: 242 SVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGT--AIVDVYAKADSLVDARRAFFSLP 299
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 164/366 (44%), Gaps = 37/366 (10%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A S+F PDV +N + CQ ++V L ++ + PD + +L
Sbjct: 84 GDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLL 143
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
KA L + LG +IH V TGL+ DV +AL+ MY C+ + DA +
Sbjct: 144 KACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALR----------- 192
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
F M E+N +SW IAG Q +Q + LF +MQ
Sbjct: 193 ----------------------FFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQR 230
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ + A + +CA + + +H + + + + A++D+YAK+ +
Sbjct: 231 LGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVD 290
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A + F ++ N +V M+ GL GLG EAL +F M R+ + + ++ + SAC
Sbjct: 291 ARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAE 350
Query: 324 V-GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
V G ++ + + +KS + ++ + ++DL G+ L EA + + M + ++ W
Sbjct: 351 VKGYLQGLQVHCLAIKSGFDVDVCVRN--AILDLYGKCKALVEAYLVFQEME-QRDSVSW 407
Query: 383 GSLLAA 388
+++AA
Sbjct: 408 NAIIAA 413
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 33/288 (11%)
Query: 45 NTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
N + L +T A+ L+ + S + D S V A ++ G ++HC +
Sbjct: 307 NAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK 366
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
+G D DV V A++ +Y CK + +A V
Sbjct: 367 SGFDVDVCVRNAILDLYGKCKALVEAYLV------------------------------- 395
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
F+ M +++ +SW +IA Q + + I M ++PD+ + L ACA L
Sbjct: 396 --FQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQ 453
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
++E G +H + GL +++ ++DMY K G I +A ++ + + + +++W ++I+
Sbjct: 454 SLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIIS 513
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
G +L+ EA FS M VKP+ T+ +L C ++ +ELG++
Sbjct: 514 GFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQ 561
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 158/373 (42%), Gaps = 42/373 (11%)
Query: 5 GLDQNNHLLSRFID---SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL+ + S +D C SL + A F + + + I Q + +
Sbjct: 166 GLEMDVRAGSALVDMYGKCRSL---EDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGL 222
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++Q L ++ V ++ ++ + R++H + +D V A++ +Y
Sbjct: 223 ELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVY 282
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A + DAR+ F SL V N M+ G + G A LF+ MT +
Sbjct: 283 AKADSLVDARRAF--FSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGI------ 334
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
G+ D +++ SACA++ G +H + G
Sbjct: 335 --GF-----------------------DVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGF 369
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ V + NA++D+Y K + +A VF+ M+ + ++W +IA L + + + +
Sbjct: 370 DVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNE 429
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M R ++P++ T+ ++L AC + +E G + +KS G++ + ++D+ +
Sbjct: 430 MLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSS--TVVDMYCKC 487
Query: 361 GYLQEAEKLLRRM 373
G + EA+KL R+
Sbjct: 488 GMITEAQKLHDRI 500
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 35/285 (12%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I GL + + S +D G A + ++ +N+ I A
Sbjct: 466 IKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQ 525
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
++++ ++PD++++ VL L+TIELG++IH Q + + D ++ + L+ MY
Sbjct: 526 KFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMY 585
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C + D+ +F++ + + WN M+ GYA G A +FE
Sbjct: 586 AKCGNMPDSLLMFEK--AQKLDFVSWNAMICGYALHGQGFEALEMFE------------- 630
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYG 240
RMQ NV P+ +A L AC+ +G ++ G + + +Y
Sbjct: 631 ------------------RMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYK 672
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIA 284
L + ++D+ +S +AL+ +M + W T+++
Sbjct: 673 LEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 258/437 (59%), Gaps = 4/437 (0%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNP-LNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
+F + D++LY++ + A+ +++P L +L + A ALRPD++ + A +L
Sbjct: 60 LFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRPDHFVLASIASATARLR 119
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
++ LG+++H V + SD V ++LI MY C DARKVFD + + N +W +
Sbjct: 120 SLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAK--NSVMWTAL 177
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
++GY G + A LF M + + +WT LI+G+ + + A+ LF M+ + V D+
Sbjct: 178 ISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDD 237
Query: 211 IAMLA-ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+L+ A+ A L A LG +H+ + G ++ + + NA++DMY+K I A +VFE
Sbjct: 238 AFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFE 297
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
+ + +I+WTTM+ G A HG EA ++ RM A VKPNE+TF+ ++ AC H GLV+
Sbjct: 298 EITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQK 357
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
GR+ F+ MK YGI P+++ Y C +DLL R+G+L EAE+L+ MP+ + A W SLL+A
Sbjct: 358 GRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSAC 417
Query: 390 NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPG 449
Y + E+ +L++L P Y +LSN+YA+ G+W+ +RK+M DM ++K PG
Sbjct: 418 KKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPG 477
Query: 450 CSYIEVSKRVHEFVAGD 466
S+IEV + F AG+
Sbjct: 478 YSWIEVGREFRLFHAGE 494
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKP 208
+V+ YAK L + R LF+ +++ +++L+A + + P + L RRM + ++P
Sbjct: 44 LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRP 103
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D + + SA A+L ++ LG+ +H + ++ + ++LIDMY K G A +VF
Sbjct: 104 DHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVF 163
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+++ K+ + WT +I+G L+G EAL++F M
Sbjct: 164 DSIVAKNSVMWTALISGYVLNGRSDEALELFRSM 197
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 273/482 (56%), Gaps = 42/482 (8%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
DYA SIF +P + +NT I+ N NA+ LYN + + PDN+++P VLKA
Sbjct: 83 DYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKAC 142
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L+ I+ G +IH GL+ DV+V +LI MY
Sbjct: 143 ARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYG------------------------ 178
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
K D+ + A+F M +K+V SW+ +IA +A + E + LF M E
Sbjct: 179 ---------KCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGC 229
Query: 207 -KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSGKI 261
+ +E ++ LSAC LGA LG H + L I LN +L+DMY K G +
Sbjct: 230 WRAEESILVNVLSACTHLGAFHLGRCAHGSL----LKNITELNVAVMTSLMDMYVKCGSL 285
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
K L +F+NM K+ ++++ +I+GL LHG GR+AL +FS M ++P+++T++++LSAC
Sbjct: 286 QKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSAC 345
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV+ G F+ MK Y IEP ++ YGCM+DL GRAG L+EA +L++ MP +AN +
Sbjct: 346 SHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVL 405
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W SLL+A ++ +++LGE A ++L +L HN +Y +LSN+YA +W + KIR M +
Sbjct: 406 WRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMIN 465
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 501
G+ + PG S +EV +V++FV+ D S+ +Y+++ ++ Q++F ++ + +L+
Sbjct: 466 RGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLD 525
Query: 502 SD 503
D
Sbjct: 526 VD 527
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 44/342 (12%)
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
V K ++E +++H Q + GL D ++++ A+C ++
Sbjct: 39 VKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVL---ATCA------------------LS 77
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
WN+M + A ++F+ + E + T+I GY AI L+ M
Sbjct: 78 DWNSM----------DYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQRE 127
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
V+PD L ACA+L ++ G IH ++ + GL V + N+LI+MY K I +
Sbjct: 128 VEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSC 187
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV-KPNEITFIAILSACCHV 324
+F M+ KSV +W+ +IA A + E L +F M R + E + +LSAC H+
Sbjct: 188 AIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHL 247
Query: 325 GLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G LGR + +++K+ E + ++D+ + G LQ+ L + M N +
Sbjct: 248 GAFHLGRCAHGSLLKNI--TELNVAVMTSLMDMYVKCGSLQKGLCLFQNMT-RKNQLSYS 304
Query: 384 SLLAASNIYGDVELGECALQHLIK-----LEPHNSGNYAILS 420
+++ ++G G ALQ + LEP + ++LS
Sbjct: 305 VIISGLGLHG---YGRQALQIFSEMVEEGLEPDDVTYVSVLS 343
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 258/444 (58%), Gaps = 3/444 (0%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
YN I A+ + ++ +S + D +++P V++A ++LG+++H +
Sbjct: 254 YNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVL 313
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
D H +L+ +Y C +AR +F+++ + ++ WN +++GY G + A
Sbjct: 314 RRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK--DLVSWNALLSGYVSSGHIGEA 370
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+ +F+ M EKN++SW +I+G A+ E + LF M+ E +P + A A+ +CA L
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
GA G+ H + + G ++ + NALI MYAK G + +A QVF M ++W +I
Sbjct: 431 GAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALI 490
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
A L HG G EA+D++ M + ++P+ ITF+ +L+AC H GLV+ GR+YFN M++ Y I
Sbjct: 491 AALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRI 550
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
P + Y +IDLL R+G EAE ++ +PF+ A IW +LL+ ++G++ELG A
Sbjct: 551 PPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAAD 610
Query: 404 HLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFV 463
L L P + G Y +LSN+YA G+W E ++RK+MRD GVKK CS+IE+ +VH F+
Sbjct: 611 KLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFL 670
Query: 464 AGDTSHPDFDRLYQILCKINGQMK 487
DTSHP+ + +Y+ L + +M+
Sbjct: 671 VDDTSHPEAEAVYKYLQDLGKEMR 694
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 208/462 (45%), Gaps = 73/462 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP--------------------- 39
+I G + H+L+R ID DYA +F S+P
Sbjct: 40 IITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALA 99
Query: 40 ------------DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
D +YN I ++ +A+ L+ K++ +PD++++ VL +
Sbjct: 100 RSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLA 159
Query: 88 KLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASC----KCIYDARKVFDELSLRVW 142
+ E + H + +G V AL+ +Y+ C ++ ARKVFD++ +
Sbjct: 160 LVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEK-- 217
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ W TM+ GY K G + + L + M E ++++ +I+GY EA+ + RRM
Sbjct: 218 DERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRM 277
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI---EQYGL---NTIVPLN------- 248
++ DE + + ACA ++LG+ +H Y+ E + N++V L
Sbjct: 278 VSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFN 337
Query: 249 -----------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
NAL+ Y SG IG+A +F+ MK K++++W MI+GLA +G
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
G E L +FS M+R +P + F + +C +G G++ F+ + G + +
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-FHAQLVKIGFDSSLSAGN 456
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+I + + G ++EA+++ R MP ++ W +L+AA +G
Sbjct: 457 ALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQHG 497
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 157/350 (44%), Gaps = 62/350 (17%)
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
++ ++++L R +H + G H++ LI +Y + AR++FDE+S +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP--DKIA 82
Query: 147 WNTMVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
TMV+GY GD+ AR++FE ++ ++ + + +I G++ + AI LF +M+ E
Sbjct: 83 RTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 205 NVKPDEIAMLAALSA----------CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
KPD+ + L+ C Q A L + G + ++NAL+ +
Sbjct: 143 GFKPDDFTYASVLAGLALVVDDEKQCVQFHAAAL---------KSGAGYVTSVSNALVSV 193
Query: 255 YAKSGK----IGKALQVFENMKNKSVITWTTMIAGLALH--------------------- 289
Y++ + A +VF+++ K +WTTM+ G +
Sbjct: 194 YSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVA 253
Query: 290 -----------GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
GL +EAL+M RM + ++ +E T+ +++ AC + L++LG++ +
Sbjct: 254 YNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVL 313
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
R + ++ L + G EA + +MP + + W +LL+
Sbjct: 314 RREDFSFHFDN--SLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSG 360
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M + L N LLS ++ S G A IF + ++ + I L +
Sbjct: 346 MPAKDLVSWNALLSGYVSS----GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L++ ++ P +Y+F +K+ L G++ H Q V G DS + ALI M
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITM 461
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + +A++VF ++ + WN
Sbjct: 462 YAKCGVVEEAQQVFR--TMPCLDSVSWN-------------------------------A 488
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-Y 239
LIA Q EA+ ++ M + ++PD I L L+AC+ G V+ G N +E Y
Sbjct: 489 LIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVY 548
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT-WTTMIAGLALHG 290
+ LID+ +SGK +A + E++ K W +++G +HG
Sbjct: 549 RIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHG 600
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 15/214 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + + I + G + A +F D +N I AL Q + + AV +Y
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVY 506
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH-----CQTVGTGLDSDVHVVAALIQ 119
++ +RPD +F VL A ++ GR+ + G D A LI
Sbjct: 507 EEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADH----YARLID 562
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLN----NARALFELMTEKNV 175
+ +A + + L + +W +++G G++ A LF L+ E +
Sbjct: 563 LLCRSGKFSEAESIIESLPFKP-TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG 621
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++ L YA Q E + + M+ VK +
Sbjct: 622 -TYMLLSNMYAATGQWEEVARVRKLMRDRGVKKE 654
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 294/557 (52%), Gaps = 71/557 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V GL + L+++ I + SS G +A +F +P ++ +N I+ + ++ +A
Sbjct: 44 LLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDA 103
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+++Y+ +Q + + PD+++FP +LKA LS +++GR +H Q G D+DV V LI +
Sbjct: 104 LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL 163
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV-ISWT 179
YA C+ + AR VF+ L L + W +V+ YA+ G+ A +F M + +V W
Sbjct: 164 YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWV 223
Query: 180 TLIA--------------------------------------GYAQMDQPNEAITLFRRM 201
L++ YA+ Q A LF +M
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 202 QVEN-------------------------------VKPDEIAMLAALSACAQLGAVELGE 230
+ N V+PD I++ +A+SACAQ+G++E
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
++ Y+ + V +++ALIDM+AK G + A VF+ ++ V+ W+ MI G LHG
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
REA+ ++ MER V PN++TF+ +L AC H G+V G +FN M + + I P+ + Y
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHY 462
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
C+IDLLGRAG+L +A ++++ MP + +WG+LL+A + VELGE A Q L ++P
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
N+G+Y LSN+YA W+ ++R M++ G+ K GCS++EV R+ F GD SHP
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 471 DFDRLYQILCKINGQMK 487
++ + + + I ++K
Sbjct: 583 RYEEIERQVEWIESRLK 599
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + GL L LI + G I A QVF+++ + W +I G + +
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
++AL M+S M+ ARV P+ TF +L AC + +++G R+ + R G + +
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVFVQN 158
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPF-EANAAIWGSLLAA 388
+I L + L A + +P E W ++++A
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 242/403 (60%), Gaps = 3/403 (0%)
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A + +E G+++H V G + +V ALI +Y + I R++FD ++++ +
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVK--DT 484
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+N+ ++ + + AR +F M +V+SWTT+I+ AQ DQ NEA+ +FR M E
Sbjct: 485 VSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHE 544
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
P+ + L LGA +LG+ IH + G+++ + + NAL+ MY K +
Sbjct: 545 RELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADS 603
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
L+VF++M+ + + TW T+I G A HGLGREA+ M+ M A V PNE+TF+ +L AC H
Sbjct: 604 LKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHS 663
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GLV+ G ++F M S YG+ P +E Y CM+DLLGRAG +Q AE + MP E ++ IW +
Sbjct: 664 GLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSA 723
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A I+ +VE+G A + L +EP N+GNY +LSNIY+ G W+E K+RK+M++ GV
Sbjct: 724 LLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGV 783
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K PGCS++++ ++H FV GD H +Y L ++ +K
Sbjct: 784 NKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLK 826
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 174/389 (44%), Gaps = 31/389 (7%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
LG A +F D+ +N+ I A C P L + I LR +
Sbjct: 46 LGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGT----IL 101
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L + + R + G G+ + V A++ Y I ARK+FD + R
Sbjct: 102 LSGYARAGRVRDARRVF---DGMGVRNTV-AWNAMVTCYVQNGDITLARKLFDAMPSR-- 155
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+V+ WNTM+ GY + AR LFE M E+N +SWT +I+GY ++Q A +FR M
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS-GKI 261
E + P++ +++ LSA LG + E IH + + G V + A+++ Y K +
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A++ FE M ++ TW+T+IA L+ G +A ++ R V + ++L+
Sbjct: 276 DSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSMLTGL 331
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ-----EAEKLLRRMPFE 376
G ++ + F+ + EP + + MI GY+Q EAE L RMPF
Sbjct: 332 ARYGRIDDAKILFDQIH-----EPNVVSWNAMI-----TGYMQNEMVDEAEDLFNRMPFR 381
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHL 405
N W ++A G E +LQ L
Sbjct: 382 -NTISWAGMIAGYARNGRSEQALVSLQAL 409
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
I DA+ +FD++ NV WN M+ GY + ++ A LF M +N ISW +IAGYA
Sbjct: 337 IDDAKILFDQIHEP--NVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYA 394
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ + +A+ + + + + P ++ ++ AC+ + A+E G+ +H+ + G
Sbjct: 395 RNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSY 454
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ NALI +Y K IG Q+F+ M K +++ + ++ L + L EA D+F+ M
Sbjct: 455 VCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP--- 511
Query: 307 VKPNEITFIAILSACCH 323
P+ +++ I+SAC
Sbjct: 512 -SPDVVSWTTIISACAQ 527
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 33/168 (19%)
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL---GREALD------- 297
+A I + G++ +A +VF++M + +I W +MI +G+ GR D
Sbjct: 36 QSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNL 95
Query: 298 -----MFSRMERA-RVKP-----------NEITFIAILSACCHVGLVELGRRYFNIMKSR 340
+ S RA RV+ N + + A+++ G + L R+ F+ M SR
Sbjct: 96 RTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSR 155
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + M+ + ++EA L RMP E N W +++
Sbjct: 156 -----DVSSWNTMLTGYCHSQLMEEARNLFERMP-ERNGVSWTVMISG 197
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 279/491 (56%), Gaps = 5/491 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL ++ + + + + ++ A F S+ D+ +N + A ++ + V L
Sbjct: 319 GLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLL 378
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL---DSDVHVVAALIQMY 121
+ + +RPD+ + +++ +S ++ +E H ++ GL D+ + ++ Y
Sbjct: 379 HWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAY 438
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C + A +F LS + NV N+M++GY ++A A+F M+E ++ +W +
Sbjct: 439 AKCGNMKYAVNIFGSLSEKR-NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLM 497
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ YA+ D P++A++LF +Q + +KPD + +++ L ACA + +V + H Y+ +
Sbjct: 498 VRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF 557
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
N V LN A IDMY+K G + A ++F + K ++ +T M+ G A+HG+G EAL +FS
Sbjct: 558 ND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSY 616
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M VKP+ + A+L AC H GLV+ G + FN ++ +G +P +EQY C++DLL R G
Sbjct: 617 MLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGG 676
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
+++A + RMP EANA IWG+LL A + +VELG HL K+E N GNY ++SN
Sbjct: 677 RIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSN 736
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+YA RW+ +IR++MR +KK GCS+IEV +R + F+AGD+SHP +Y+ L
Sbjct: 737 LYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLST 796
Query: 482 INGQMKFAEHL 492
++ MK H
Sbjct: 797 LDQLMKEPFHF 807
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 37/295 (12%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY+ F DV +N I + A L++ + ++P+ + +L
Sbjct: 135 AYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCAS 194
Query: 89 L---STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
L + G+E+HC HV+ + EL V +V+
Sbjct: 195 LEENAGYRYGKEVHC-----------HVLRRM------------------EL---VEDVS 222
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR-MQVE 204
V N++++ Y ++G + A LF M ++++SW +IAGYA + +A+ LF + +E
Sbjct: 223 VINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLE 282
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-GLNTIVPLNNALIDMYAKSGKIGK 263
+KPD + +++ L ACA + +++ + IH YI ++ GL + NAL+ YAK
Sbjct: 283 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 342
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
ALQ F + K +I+W ++ G +++ M R ++P+ IT + I+
Sbjct: 343 ALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTII 397
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 155/350 (44%), Gaps = 40/350 (11%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI-LYNKIQ-ASALRPDNYSFPF 81
G DY +F + D ++N + L + V+ L+ + + +P++ +
Sbjct: 27 GALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAI 86
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL +L + G+ +H + +GL+S ALI MYA C +
Sbjct: 87 VLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLV-------------- 131
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++A A F + K+V+SW +IAG+++ EA LF M
Sbjct: 132 ------------------CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAM 173
Query: 202 QVENVKPDEIAMLAALSACAQL---GAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAK 257
++P+ + + L CA L G+ +H ++ + L V + N+L+ Y +
Sbjct: 174 LKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLR 233
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR-MERARVKPNEITFIA 316
G++ KA +F NMK++ +++W +IAG A +G +AL++FS + +KP+ +T ++
Sbjct: 234 IGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVS 293
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+L AC HV +++ + + G+ ++ + Y Q A
Sbjct: 294 VLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAA 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVEN-VKPDEI 211
YAK G L+ LF M +++ + W +++G A E + LFR M + N KP+ +
Sbjct: 23 YAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSV 82
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI-GKALQVFEN 270
+ L CA+L + G+ +H+Y+ + GL + NALI MYAK G + A F
Sbjct: 83 TIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNR 141
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV---GLV 327
++ K V++W +IAG + + EA +F M + ++PN T +IL C +
Sbjct: 142 IEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGY 201
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
G+ + R + + ++ R G +++AE L R M + W +++A
Sbjct: 202 RYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMK-SRDLVSWNAIIA 260
Query: 388 --ASN 390
ASN
Sbjct: 261 GYASN 265
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA-LHGLGREALDMFSRMERA 305
L L+++YAKSG + ++F M + + W +++GLA E + +F M
Sbjct: 15 LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMV 74
Query: 306 -RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL- 363
KPN +T +L C L E + + + G+E +I + + G +
Sbjct: 75 NEAKPNSVTIAIVLPVCAR--LREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVC 132
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ--HLIKLEPHNSGNYAILSN 421
+A R+ F+ + W +++A + + + E A + H + P NYA +++
Sbjct: 133 SDAYAAFNRIEFK-DVVSWNAVIAG---FSENKFTEEAFKLFHAMLKGPIQP-NYATIAS 187
Query: 422 IYAILGRWNESGKIR 436
I + E+ R
Sbjct: 188 ILPVCASLEENAGYR 202
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 255/438 (58%), Gaps = 24/438 (5%)
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
+RPD S VL A + G+ +H V +G D+ V AL+ MYA C + +A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN----VISWTTLIAGYAQ 187
KVFD + + +V WN MV GY+++G +A LFE M E+N V+SW+ +IA +AQ
Sbjct: 69 KVFDRIKEK--DVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQ 126
Query: 188 MDQPNEAITLFRRMQVEN-----------------VKPDEIAMLAALSACAQLGAVELGE 230
E + +FR MQ VKP+ + AL ACA+L A+ LG
Sbjct: 127 RGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGR 186
Query: 231 WIHNYIEQYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
IH YI + ++ + + N LIDMYAKSG I A VF+N+K K+ ++WT+++ G +H
Sbjct: 187 QIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMH 246
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ 349
G G+EAL++F M R ++P+ +T + +L AC H G+++ G +FN M +G+ P E
Sbjct: 247 GRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEH 306
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
Y CM+DLLGRAG L EA +L+ M E ++ +W +LL+ I+ +VELGE A + L++L
Sbjct: 307 YACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELN 366
Query: 410 PHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
N G+Y +LSNIYA RW + ++R +M++ G++K PGCS+++ K F D +H
Sbjct: 367 SENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTH 426
Query: 470 PDFDRLYQILCKINGQMK 487
P ++Y+IL + ++K
Sbjct: 427 PQSKQIYEILRSLTQRIK 444
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 53/241 (21%)
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+++PD ++++ L ACA +GA G+ +H + G + + NAL+DMYAK G + +A
Sbjct: 8 DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67
Query: 265 LQVFENMKNKSVITWTTM-----------------------------------IAGLALH 289
+VF+ +K K V++W M IA A
Sbjct: 68 SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127
Query: 290 GLGREALDMFSRMERAR-----------------VKPNEITFIAILSACCHVGLVELGRR 332
GLG E LD+F M+ VKPN T L AC + + LGR+
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+ + + C+ID+ ++G + A + + + N W SL+ ++
Sbjct: 188 IHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK-QKNFVSWTSLMTGYGMH 246
Query: 393 G 393
G
Sbjct: 247 G 247
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 68 QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD-VHVVAALIQMYASCKC 126
Q ++P+ ++ L A +L+ + LGR+IH + DS ++V LI MYA
Sbjct: 158 QDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGD 217
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
I AR VFD L + N W +++ GY G
Sbjct: 218 IDVARFVFDNLKQK--NFVSWTSLMTGYGMHG---------------------------- 247
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIV 245
+ EA+ +F M+ ++PD + +L L AC+ G ++ G E+ ++ +++G+
Sbjct: 248 ---RGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQ 304
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
++D+ ++G++ +A+++ E M+ S I W +++G +H
Sbjct: 305 EHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIH 349
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 286/524 (54%), Gaps = 45/524 (8%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIF----THKSKPDVYLYNTTIKALCQTDNPLNAVI 62
++N + I S ++LGF + A+S+F + KPD+ +N + +
Sbjct: 297 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 356
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
+ ++Q +P++ S VL+A+ +L + +G+E H + G D DV+V +LI MY
Sbjct: 357 ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 416
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK--------- 173
+ A+ VFD + R N+ WN++V+GY+ G +A L M ++
Sbjct: 417 KNHSLTSAQAVFDNMKNR--NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTW 474
Query: 174 ------------------------------NVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
NV+SWT LI+G +Q +++ F +MQ
Sbjct: 475 NGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQ 534
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E V P+ ++ L ACA L ++ G+ IH + G V + ALIDMY+KS +
Sbjct: 535 EGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKN 594
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +VF ++NK++ +W MI G A+ GLG+EA+ +F+ M++ V P+ ITF A+LSAC +
Sbjct: 595 AHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 654
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL+ G +YF+ M + Y I P++E Y CM+DLLGRAGYL EA L+ MP + +A IWG
Sbjct: 655 SGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWG 714
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL + I+ +++ E A ++L KLEP+NS NY ++ N+Y+I RW + +R++M G
Sbjct: 715 ALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAG 774
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
V+ S+I++++RVH F + + HPD ++Y L ++ +MK
Sbjct: 775 VRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMK 818
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 203/384 (52%), Gaps = 13/384 (3%)
Query: 1 MIVRGLDQNNHL---LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
+I RG D + +L L F C L + A +F P+ L+N I Q++
Sbjct: 159 LIKRGFDLDVYLRCALMNFYGRCWGL---EKANQVFHEMPNPEALLWNEAIILNLQSEKL 215
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
V L+ K+Q S L+ + + VL+A K+ + ++IH GLDSDV + L
Sbjct: 216 QKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 275
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF-ELMT---EK 173
I MY+ + AR+VFD + R N + WN+M++ YA +G LN+A +LF EL + +
Sbjct: 276 ISMYSKNGKLELARRVFDSMENR--NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 333
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
++++W L++G+ E + + +RMQ E KP+ +M + L A ++LG + +G+ H
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETH 393
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
Y+ + G + V + +LIDMY K+ + A VF+NMKN+++ W ++++G + G+
Sbjct: 394 GYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 453
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
+AL + ++ME+ +KP+ +T+ ++S G + + KS G+ P + + +
Sbjct: 454 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKS-LGLTPNVVSWTAL 512
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEA 377
I +AG +++ K +M E
Sbjct: 513 ISGSSQAGNNRDSLKFFAQMQQEG 536
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 188/427 (44%), Gaps = 76/427 (17%)
Query: 21 SSLGFSDY-AYSIFTHKSKPDVYL-YNTTIKALCQTDNPLNAVI-LYNKIQASALRPDNY 77
S LGF D+ + ++ + P YL +N+ ++ + L+ V+ ++ ++ + D+
Sbjct: 75 SYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSE 134
Query: 78 SFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL 137
+ LK ++ I LG EIH + G D DV++ AL+ Y C + A +VF E+
Sbjct: 135 VYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM 194
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
N AL W I Q ++ + + L
Sbjct: 195 P-----------------------NPEALL----------WNEAIILNLQSEKLQKGVEL 221
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
FR+MQ +K + ++ L AC ++GA+ + IH Y+ ++GL++ V L N LI MY+K
Sbjct: 222 FRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSK 281
Query: 258 SGKIGKALQVFENMKNKS-----------------------------------VITWTTM 282
+GK+ A +VF++M+N++ ++TW +
Sbjct: 282 NGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCL 341
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
++G LHG E L++ RM+ KPN + ++L A +G + +G+ + R G
Sbjct: 342 LSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVL-RNG 400
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
+ + +ID+ + L A+ + M N W SL++ + G + E AL
Sbjct: 401 FDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK-NRNIFAWNSLVSGYSFKG---MFEDAL 456
Query: 403 QHLIKLE 409
+ L ++E
Sbjct: 457 RLLNQME 463
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 266/441 (60%), Gaps = 9/441 (2%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
SS S A +F P + +KA PL A+ L+ + L D + F
Sbjct: 429 SSTPPSRTALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLFKHARQH-LADDTFVFT 483
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FVLKA L G ++H V G + +V ALI +Y +C+ +ARKVFDE+ ++
Sbjct: 484 FVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVK 543
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
NV WN M+ G+A G++ AR LF+ M +NV+SWT LI GY + EA+TL R
Sbjct: 544 --NVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRH 601
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M + P EI +LA + A + LG + +GE ++ Y E+ G+ + + N+LID+YAK G
Sbjct: 602 MMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGS 661
Query: 261 IGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ +L+VF+ M +++++WT++I+G A+HGL EAL++F+ M RA +KPN ITF+++++
Sbjct: 662 VQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVIN 721
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLVE G +F M Y I+P+I+ +GC+ID+LGRAG L EAE+++ +P E N
Sbjct: 722 ACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNV 781
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+W LL + YG+V +GE A++ + LE + G++A+LSN+ LGR++++ + RK++
Sbjct: 782 TVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLL 841
Query: 440 RDMGVKKMPGCSYIEVSKRVH 460
+ K+ + +E K++H
Sbjct: 842 DQRKIVKLQE-AVMEAVKKLH 861
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 239/416 (57%), Gaps = 2/416 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F DV +N+ I Q + + L+ +QA ++ D + V+ A
Sbjct: 994 ARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTH 1053
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + + ++ DV++ LI Y + A KVF ++ + N N
Sbjct: 1054 LGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDK--NTVTLN 1111
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
M+ YAK G+L +A+ +F+ + K++ISW+++I Y+Q ++++ LFR+MQ VKP
Sbjct: 1112 AMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKP 1171
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D + + + LSACA LGA++LG+WIH+Y+ + + + N+LIDM+AK G + +ALQVF
Sbjct: 1172 DAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVF 1231
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+M+ K ++W ++I GLA +G EALD+F M +PNE+TF+ +L AC + LVE
Sbjct: 1232 TDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVE 1291
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G +F MKS + +EP+++ YGC++D+L RAG L++A + MP + +W LL A
Sbjct: 1292 EGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGA 1351
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
+G+V + E A + L +L+P NS + +LSNIYA RW+++ +R+ D V
Sbjct: 1352 CRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAMNVRRWTADNAV 1407
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 206/419 (49%), Gaps = 69/419 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
++V GL + +S+ I +L SD A+ +F P +L+NT ++ L Q+D P
Sbjct: 864 LVVSGLHNCQYAMSKVI-RLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPK 922
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+A++ Y K Q ++PDN +FPFVLKA K + G ++H + G D+ V +LI
Sbjct: 923 DAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLI 982
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+YA+C + AR VF+E+ ++ +V WN+++ GY
Sbjct: 983 YLYAACGALACARSVFNEMLVK--DVVSWNSLIGGY------------------------ 1016
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+Q ++ E +TLF+ MQ E V+ D++ M+ +SAC LG + + + YIE
Sbjct: 1017 -------SQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEH 1069
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-------------------------- 272
+ V L N LID Y + G++ A +VF MK
Sbjct: 1070 NHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKI 1129
Query: 273 -----NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
NK +I+W++MI + ++L++F +M+RA+VKP+ + ++LSAC H+G +
Sbjct: 1130 FDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGAL 1189
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+LG+ + ++ R I+ +ID+ + G +QEA ++ M E + W S++
Sbjct: 1190 DLGKWIHDYVR-RNNIKADTIMENSLIDMFAKCGCVQEALQVFTDME-EKDTLSWNSII 1246
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 279/491 (56%), Gaps = 5/491 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL ++ + + + + ++ A F S+ D+ +N + A ++ + V L
Sbjct: 380 GLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLL 439
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL---DSDVHVVAALIQMY 121
+ + +RPD+ + +++ +S ++ +E H ++ GL D+ + ++ Y
Sbjct: 440 HWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAY 499
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C + A +F LS + NV N+M++GY ++A A+F M+E ++ +W +
Sbjct: 500 AKCGNMKYAVNIFGSLSEKR-NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLM 558
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ YA+ D P++A++LF +Q + +KPD + +++ L ACA + +V + H Y+ +
Sbjct: 559 VRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF 618
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
N V LN A IDMY+K G + A ++F + K ++ +T M+ G A+HG+G EAL +FS
Sbjct: 619 ND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSY 677
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M VKP+ + A+L AC H GLV+ G + FN ++ +G +P +EQY C++DLL R G
Sbjct: 678 MLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGG 737
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
+++A + RMP EANA IWG+LL A + +VELG HL K+E N GNY ++SN
Sbjct: 738 RIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSN 797
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+YA RW+ +IR++MR +KK GCS+IEV +R + F+AGD+SHP +Y+ L
Sbjct: 798 LYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLST 857
Query: 482 INGQMKFAEHL 492
++ MK H
Sbjct: 858 LDQLMKEPFHF 868
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 37/295 (12%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY+ F DV +N I + A L++ + ++P+ + +L
Sbjct: 196 AYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCAS 255
Query: 89 L---STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
L + G+E+HC HV+ + EL V +V+
Sbjct: 256 LEENAGYRYGKEVHC-----------HVLRRM------------------EL---VEDVS 283
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR-MQVE 204
V N++++ Y ++G + A LF M ++++SW +IAGYA + +A+ LF + +E
Sbjct: 284 VINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLE 343
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY-GLNTIVPLNNALIDMYAKSGKIGK 263
+KPD + +++ L ACA + +++ + IH YI ++ GL + NAL+ YAK
Sbjct: 344 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 403
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
ALQ F + K +I+W ++ G +++ M R ++P+ IT + I+
Sbjct: 404 ALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTII 458
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 155/350 (44%), Gaps = 40/350 (11%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI-LYNKIQ-ASALRPDNYSFPF 81
G DY +F + D ++N + L + V+ L+ + + +P++ +
Sbjct: 88 GALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAI 147
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL +L + G+ +H + +GL+S ALI MYA C +
Sbjct: 148 VLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLV-------------- 192
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++A A F + K+V+SW +IAG+++ EA LF M
Sbjct: 193 ------------------CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAM 234
Query: 202 QVENVKPDEIAMLAALSACAQL---GAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAK 257
++P+ + + L CA L G+ +H ++ + L V + N+L+ Y +
Sbjct: 235 LKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLR 294
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR-MERARVKPNEITFIA 316
G++ KA +F NMK++ +++W +IAG A +G +AL++FS + +KP+ +T ++
Sbjct: 295 IGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVS 354
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+L AC HV +++ + + G+ ++ + Y Q A
Sbjct: 355 VLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAA 404
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 20/300 (6%)
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDAR--KVFDELSLRVWNVAVWNTMVAG----YAKVG 158
G + ++AAL++ SC I R V +L++ +V+ ++ G YAK G
Sbjct: 33 VGYKPNGQILAALLK---SCVAISAIRFGSVLHGYALKLGHVSC-QSLCKGLLNLYAKSG 88
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVEN-VKPDEIAMLAA 216
L+ LF M +++ + W +++G A E + LFR M + N KP+ + +
Sbjct: 89 ALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIV 148
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI-GKALQVFENMKNKS 275
L CA+L + G+ +H+Y+ + GL + NALI MYAK G + A F ++ K
Sbjct: 149 LPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKD 207
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV---GLVELGRR 332
V++W +IAG + + EA +F M + ++PN T +IL C + G+
Sbjct: 208 VVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKE 267
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASN 390
+ R + + ++ R G +++AE L R M + W +++A ASN
Sbjct: 268 VHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMK-SRDLVSWNAIIAGYASN 326
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 14/252 (5%)
Query: 192 NEAITLF-RRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+EA++LF R++ KP+ + A L +C + A+ G +H Y + G + L
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA-LHGLGREALDMFSRMERA-RV 307
L+++YAKSG + ++F M + + W +++GLA E + +F M
Sbjct: 79 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA 138
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL-QEA 366
KPN +T +L C L E + + + G+E +I + + G + +A
Sbjct: 139 KPNSVTIAIVLPVCAR--LREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDA 196
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ--HLIKLEPHNSGNYAILSNIYA 424
R+ F+ + W +++A + + + E A + H + P NYA +++I
Sbjct: 197 YAAFNRIEFK-DVVSWNAVIAG---FSENKFTEEAFKLFHAMLKGPIQP-NYATIASILP 251
Query: 425 ILGRWNESGKIR 436
+ E+ R
Sbjct: 252 VCASLEENAGYR 263
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 281/492 (57%), Gaps = 10/492 (2%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTH--KSKPDVYLYNTTIKALCQ-TDNPLNAVILYN 65
N LL+ +S G + A +F +S DV + T + +L Q P +
Sbjct: 52 NTFLLNALHHLYASCGVTSSARHLFYQIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFK 111
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ + D+ + V ++ + +GR+ V GL V V A++ MY C
Sbjct: 112 EMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCG 171
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ + R+VF E++ R NV W+T++ G K + N R +F+ M E+N + WT +IAGY
Sbjct: 172 LVEEVRRVFCEMNER--NVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGY 229
Query: 186 AQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNT 243
E L M + + + + + + LSACAQ G V +G W+H Y ++ G
Sbjct: 230 VGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREM 289
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM- 302
+ + AL+DMYAK G I A +VF+ + ++V+ W M+ GLA+HG G+ LD+F +M
Sbjct: 290 HIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMI 349
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
E A KP+++TF+A+LSAC H GLV+ G YF ++S YG PKIE Y CM+D+LGRAG+
Sbjct: 350 EEA--KPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGH 407
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L+EA L+++MP N + GSLL + N +G ++LGE LQ LI+++ HN+ + +LSN+
Sbjct: 408 LEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNM 467
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKI 482
Y + G+ +++ +R++++ G++K+PG S I V +H+F AGD SHP +Y L +
Sbjct: 468 YVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNM 527
Query: 483 NGQMKFAEHLQN 494
+++ A ++ N
Sbjct: 528 IQRLRLAGYVPN 539
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 259/427 (60%), Gaps = 10/427 (2%)
Query: 33 FTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA-LRPDNYSFPFVLKAVVKLST 91
F + V +N + Q P + L+N + + ++PD ++ V+ + L
Sbjct: 151 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD 210
Query: 92 IELGREIHCQ-TVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV-WNT 149
L I + G + V AL+ M+A C + A K+F++L + + +V WN
Sbjct: 211 PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 270
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVK 207
M++ YA+VGDL +A+ LF+ M +++ +SW ++IAGY Q + +AI LF M ++ K
Sbjct: 271 MISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRK 330
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PDE+ M++ SAC LG + LG W + ++ + + + N+LI+MY++ G + A+ +
Sbjct: 331 PDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLI 390
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ M + ++++ T+I+G A HG G E++++ S+M+ ++P+ IT+IAIL+AC H GL+
Sbjct: 391 FQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLL 450
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G+R F +K P ++ Y CMID+LGRAG L+EA KL++ MP E +A I+GSLL
Sbjct: 451 DEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLN 505
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A++I+ VELGE A L K+EPHNSGNYA+LSNIYA GRW E K+R MR GVKK
Sbjct: 506 ATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKT 565
Query: 448 PGCSYIE 454
G S++E
Sbjct: 566 TGLSWLE 572
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 174/380 (45%), Gaps = 81/380 (21%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q ++P+ + ++K+ S + L + +G D D +V ++ +YA
Sbjct: 23 LQHCDIKPNASFYSVMMKSAGSESMLFL-----AHVLKSGYDRDHYVRNGILGIYAKYGP 77
Query: 127 IYDARKVFDELSLRV---WNVAV------------------------------WNTMVAG 153
I ARK+FDE+ R WNV + W TM+ G
Sbjct: 78 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITG 137
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIA 212
+AK G+L AR F+ M E++V+SW +++GYAQ P E I LF M NV+PDE
Sbjct: 138 HAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETT 197
Query: 213 MLAALSACAQLGAVELGEWI---------------------------------HNYIEQY 239
+S+C+ LG L E I H EQ
Sbjct: 198 WATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL 257
Query: 240 GL---NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
G+ + VP NA+I YA+ G + A +F+ M + ++W +MIAG +G +A+
Sbjct: 258 GVYKYRSSVPW-NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAI 316
Query: 297 DMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
+F M E +R KP+E+T +++ SAC H+G + LG +I+K + I+ I Y +
Sbjct: 317 KLFEEMISSEDSR-KPDEVTMVSVFSACGHLGELGLGNWAVSILKVNH-IQISISVYNSL 374
Query: 354 IDLLGRAGYLQEAEKLLRRM 373
I++ R G +Q+A + + M
Sbjct: 375 INMYSRCGSMQDAVLIFQEM 394
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 257/453 (56%), Gaps = 43/453 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQ--TDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
A +F + +V + T I A D L +IL + +RP+ +++ VL+A
Sbjct: 109 AEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFR---EGVRPNMFTYSSVLRAC 165
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L + R++HC + TGL+SDV V +ALI +Y+
Sbjct: 166 DGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYS------------------------ 198
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
K DL+NA +F+ M ++++ W ++I G+AQ NEA+ LF+RM+
Sbjct: 199 ---------KWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGF 249
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D+ + + L AC L +ELG +H ++ ++ + I LNNALIDMY K G + A
Sbjct: 250 LADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLI--LNNALIDMYCKCGSLEDANS 307
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
F M K VI+W+TM+AGLA +G R+AL++F M+ + +PN IT + +L AC H GL
Sbjct: 308 AFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGL 367
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G YF MK +G++P E YGC+IDLLGRAG L EA KL+ M E ++ W +LL
Sbjct: 368 VEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLL 427
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A ++ +V+L A + +I+LEP ++G Y +LSNIYA RW + ++RK M + G++K
Sbjct: 428 GACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRK 487
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
PGCS+IEV K++H F+ GDTSHP + + Q L
Sbjct: 488 TPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRL 520
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 152/286 (53%), Gaps = 12/286 (4%)
Query: 106 GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW--NVAVWNTMVAGYAKVGDLNNA 163
G+ +D + LI+ ++ + + ++V + + + + + V NT++ Y K L A
Sbjct: 50 GVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEA 109
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
LF+ M E+NV+SWTT+I+ Y+ ++A+ M E V+P+ + L AC L
Sbjct: 110 EDLFDEMPERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACDGL 168
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
+ +H I + GL + V + +ALID+Y+K + AL VF+ M + ++ W ++I
Sbjct: 169 PNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII 225
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYG 342
G A + G EAL++F RM+RA ++ T ++L AC + L+ELGR+ + +++K
Sbjct: 226 GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK---- 281
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + +ID+ + G L++A RM E + W +++A
Sbjct: 282 FDQDLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAG 326
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 37/291 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I GL+ + + S ID S D A +F D+ ++N+ I Q + A
Sbjct: 178 IIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEA 237
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ + D + VL+A L+ +ELGR++H + D D+ + ALI M
Sbjct: 238 LNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL--KFDQDLILNNALIDM 295
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + DA F + + +V W+TMVAG A+
Sbjct: 296 YCKCGSLEDANSAFSRMVEK--DVISWSTMVAGLAQ------------------------ 329
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-Y 239
GY++ +A+ LF M+ +P+ I +L L AC+ G VE G + +++ +
Sbjct: 330 --NGYSR-----QALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLF 382
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
G++ LID+ ++G++ +A+++ M+ +TW T++ +H
Sbjct: 383 GVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M+ V D I + C+ GAV+ G+ +H +I G + + N L++MY K
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ +A +F+ M ++V++WTTMI+ + + L +AL M R V+PN T+ ++L A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C GL L + + I+K+ G+E + +ID+ + L A + MP +
Sbjct: 165 C--DGLPNLRQLHCGIIKT--GLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR-DLV 219
Query: 381 IWGSLLAA 388
+W S++
Sbjct: 220 VWNSIIGG 227
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 284/508 (55%), Gaps = 21/508 (4%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G + L+ F+ S +S YA + + + +N I+AL + P A
Sbjct: 1234 LVVSGRLASPSHLAAFLASLASSNHLSYARLVLPQRPA-TLLAHNAFIRALARGPRPCLA 1292
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVV---------KLSTIELGREI-----HCQTVGTG 106
+ + L PD+YS F+++A K + E+ + H V G
Sbjct: 1293 FAAFRDL---PLPPDHYSLNFLVRAATALVASAAEEKHVSAEVNARLQAVSAHGAAVRWG 1349
Query: 107 LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARAL 166
+D HV + ++ MYA+ + +R F E++ +V MVA A GD++ AR L
Sbjct: 1350 HAADPHVQSGVLSMYAALGDVASSRAAFAEIACP--DVVCVTAMVAALAAGGDVDAARDL 1407
Query: 167 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV 226
F+ M +++ ++W+ +IAGY + + EA+ LF M E +++ L+ACAQ+G +
Sbjct: 1408 FDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTL 1467
Query: 227 ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 286
+ G+W+H Y+ G+ + L AL+DMY+K G + A++VFE+M ++V TWT+ ++GL
Sbjct: 1468 DRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGL 1527
Query: 287 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
A++G+G E L +F RME A ++PN ++F+A+L C GLV+ GR F+ M +YG++P
Sbjct: 1528 AMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM-DKYGVDPW 1586
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
E YGCM+DL GRAG L +A + MP E + +WG+LL AS I+ V+LG+ AL L+
Sbjct: 1587 PEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLL 1646
Query: 407 KLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGD 466
+E N + LSNIYA W ++R +M+ GVKK+PG S IEV +VHEF G
Sbjct: 1647 AIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGG 1706
Query: 467 TSHPDFDRLYQILCKINGQMKFAEHLQN 494
HP ++ + +L +++ +++ + N
Sbjct: 1707 RLHPRYNEIELMLAEMDRRLRLQGYTAN 1734
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 273/484 (56%), Gaps = 14/484 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N L+S ++ G A +F DV +N + + + + A L++ A
Sbjct: 197 NALMSGYV----QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---A 249
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ +R D +++ V+ + +E R + S +VAA IQ + + +
Sbjct: 250 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR----RMMDE 304
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A+++F+ + R NVA WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q
Sbjct: 305 AKELFNMMPCR--NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
E + LF M + A LS CA + A+E G +H + + G + N
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+ MY K G + A FE M+ + V++W TMIAG A HG G+EAL++F M KP
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++IT + +L+AC H GLVE G YF M +G+ K E Y CMIDLLGRAG L EA L
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
++ MPFE ++ +WG+LL AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++ K+R +M + GVKK+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 490 EHLQ 493
++
Sbjct: 663 GYVS 666
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 178/408 (43%), Gaps = 58/408 (14%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F +PD Y YNT + AL + + +A L++++ D+ ++ ++ +
Sbjct: 88 AASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHAN 143
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ L R + D ++ Y + +AR +F+ S W+V WN
Sbjct: 144 HGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN--SRTEWDVISWN 197
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+++GY + G ++ AR LF+ M ++V+SW +++GYA+ EA LF V +V
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV-- 255
Query: 209 DEIAMLAALSACAQLG----------------AVELGEWIHNYIEQYGLN------TIVP 246
A +S AQ G AV + YI++ ++ ++P
Sbjct: 256 --FTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 313
Query: 247 LN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
N ++ YA++G + +A VF+ M K ++W M+A + G E L +F
Sbjct: 314 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 373
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID----- 355
M R N F +LS C + +E G + + ++++ YG+ GC +
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV-------GCFVGNALLA 426
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
+ + G +++A M E + W +++A +G G+ AL+
Sbjct: 427 MYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 470
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 72/336 (21%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ DA ++F + R + + +N M+AGY+ G L A +LF + + S+ TL+ A
Sbjct: 54 VADAERLFAAMPRR--STSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALA 111
Query: 187 QMDQPNEAITLFRRMQVENV---------------------------KPDEIAMLAALSA 219
+A LF M V + + D ++ L+A
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAA 171
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+ G VE + N ++ + + NAL+ Y + GK+ +A ++F+ M + V++W
Sbjct: 172 YVRNGRVEEARGLFNSRTEWDVISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSW 227
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
M++G A G EA +F + A V+ + T+ A++S G++E RR F+ M
Sbjct: 228 NIMVSGYARRGDMVEARRLF---DAAPVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPE 283
Query: 340 RYGI----------------EPK----------IEQYGCMIDLLGRAGYLQEAEKLLRRM 373
R + E K + + M+ +AG L+EA+ + M
Sbjct: 284 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 374 PFEANAAIWGSLLAASNIYG--------DVELGECA 401
P + +A W ++LAA + G +E+G C
Sbjct: 344 P-QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
+N I + ++G++ A ++F M +S T+ M+AG + +G A +F RA
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----RAIP 96
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+P+ ++ +L A + R F+ M R + Y MI G + A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVSLAR 151
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVE 396
P E +A W +LAA G VE
Sbjct: 152 HYFDLAP-EKDAVSWNGMLAAYVRNGRVE 179
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 259/432 (59%), Gaps = 6/432 (1%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD----VHVVA 115
A+ L K++ ++ D+ ++ ++ A + + ++G+++H + L+ + + V
Sbjct: 273 ALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSN 332
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI +Y + +ARK+F + +R N+ WN +++GY G + A++ FE M KN+
Sbjct: 333 ALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++ T +I+G AQ +E + LF++M+++ +P + A AL+AC+ LGA+E G +H
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G + + + NA+I MYAK G + A VF M + +++W +MIA L HG G +A
Sbjct: 451 LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKA 510
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+++F +M + V P+ ITF+ +L+AC H GLVE GR YFN M YGI P + Y M+D
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVD 570
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
L RAG A ++ MP + A +W +LLA I+G+++LG A + L KL P N G
Sbjct: 571 LFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGT 630
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA +GRWN+ K+RK+MRD V+K P CS+IEV +VH F+ D HP+ +
Sbjct: 631 YVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSV 690
Query: 476 YQILCKINGQMK 487
Y+ L ++ +MK
Sbjct: 691 YRYLEQLGLEMK 702
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 208/471 (44%), Gaps = 82/471 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN---- 56
MI G H L+R ++ YA +F PD T I A C N
Sbjct: 39 MIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELG 98
Query: 57 -------PL--------NAVI--------------LYNKIQASALRPDNYSFPFVLKAVV 87
PL NA+I L+ ++ RPD+++F VL A+V
Sbjct: 99 REIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV 158
Query: 88 KLSTIELG-REIHCQTVGTGLDS-DVHVVAALIQMYAS--------CKCIYDARKVFDEL 137
E ++HC V TG+ V+ AL+ +Y C + ARK+FDE+
Sbjct: 159 LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEM 218
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
R + W TM+ GY + DLN AR +FE M E +W +I+GY EA+TL
Sbjct: 219 PKR--DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTL 276
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT----IVPLNNALID 253
R+M+ ++ D+I +SACA +G+ ++G+ +H YI + LN + ++NALI
Sbjct: 277 CRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALIT 336
Query: 254 MYAKSGKIGKALQVFENMKNKSVITW-------------------------------TTM 282
+Y K+ K+ +A ++F M +++ITW T M
Sbjct: 337 LYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVM 396
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I+GLA +G G E L +F +M +P + F L+AC +G +E GR+ + G
Sbjct: 397 ISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ-LHAQLVHLG 455
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
E + MI + + G ++ AE + MP + W S++AA +G
Sbjct: 456 YESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHG 505
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 42/307 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N +LS ++++ G + A S F ++ I L Q
Sbjct: 354 MPVRNIITWNAILSGYVNA----GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEG 409
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ P +++F L A L +E GR++H Q V G +S + V A+I M
Sbjct: 410 LKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISM 469
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A VF +++ ++ WN+M+A + G
Sbjct: 470 YAKCGVVEAAESVF--VTMPSVDLVSWNSMIAALGQHG---------------------- 505
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
+AI LF +M E V PD I L L+AC+ G VE G + ++ +E Y
Sbjct: 506 ---------HGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG---LGREA 295
G+ ++D++ ++G A V ++M +K W ++AG +HG LG EA
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616
Query: 296 LDMFSRM 302
+ ++
Sbjct: 617 AEQLFKL 623
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 156/347 (44%), Gaps = 53/347 (15%)
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
++ L R +H + +G H + L++MY + AR++F+E+ + T
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNP--DAIARTT 84
Query: 150 MVAGYAKVGDLNNARALFE--LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ Y +G+L R +F + ++ + + +I GYA + A+ LFR M+ ++ +
Sbjct: 85 LITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFR 144
Query: 208 PDEIAMLAALSACAQ-LGAVELGEWIHNYIEQYGLNTI-VPLNNALIDMYAK-SGKIG-- 262
PD+ + LSA +G + +H + + G+ + + NAL+ +Y K + ++G
Sbjct: 145 PDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIP 204
Query: 263 -----KALQVFENMKNKSVITWTTMIAGLALH---------------------------- 289
A ++F+ M + +TWTTMI G +
Sbjct: 205 CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264
Query: 290 ---GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEP 345
G +EAL + +M ++ ++IT+ I+SAC +VG ++G++ + I+K+ + P
Sbjct: 265 VHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE--LNP 322
Query: 346 K----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ +I L + + EA K+ MP N W ++L+
Sbjct: 323 NHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSG 368
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A S+F D+ +N+ I AL Q + + A+ L++++ + PD +F VL
Sbjct: 474 GVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVL 533
Query: 84 KAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
A +E GR + + G+ A ++ ++ AR V D + +
Sbjct: 534 TACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKP- 592
Query: 143 NVAVWNTMVAGYAKVGDLN----NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
VW ++AG G+++ A LF+LM + N ++ L YA + + N+ +
Sbjct: 593 GAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ-NDGTYVLLSNIYADVGRWNDVAKVR 651
Query: 199 RRMQVENVKPD 209
+ M+ + V+ +
Sbjct: 652 KLMRDQAVRKE 662
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 274/492 (55%), Gaps = 66/492 (13%)
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
P +A+ ++ + R D++++ F++KA+ + R +H V G D V A
Sbjct: 114 PRDALAAFSAMP----RRDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNA 168
Query: 117 LIQMYASCKCIYDARKV-------------------------------FDELSLR---VW 142
LI Y+ DARKV FDE+ + W
Sbjct: 169 LIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSW 228
Query: 143 N--------------------------VAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
N V W+TMV+GY K GDL AR +F+ M KN++
Sbjct: 229 NTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLV 288
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+WT +++ AQ +EA LF +M+ +V+ D A+++ L+ACA+ G++ LG+ IH Y+
Sbjct: 289 TWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYV 348
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREA 295
+ L + NALIDM+ K G + +A VF+ K ++W ++I G A+HG G +A
Sbjct: 349 RKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKA 408
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L++F++M++ P+ +T I +LSAC H+G V+ GRR+F+ M+ YGI P+IE YGCMID
Sbjct: 409 LELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMID 468
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGR G ++EA L++ MP+E N IWGSLL+A ++ +VE E A+ L KL+P N+GN
Sbjct: 469 LLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGN 528
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
YA+LSNIYA G+W++ K R M+ G +K G S++E+++ HEF GD H D D++
Sbjct: 529 YAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQI 588
Query: 476 YQILCKINGQMK 487
+++ +++ +K
Sbjct: 589 SEMVDRLSSHVK 600
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 34/265 (12%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A IF ++ + + A Q A L+ +++ +++ D + +L A
Sbjct: 273 EMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAAC 332
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ ++ LG+ IH L HV ALI M+ C C+ A VFD +++ +V+
Sbjct: 333 AESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVS- 391
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN+++ G+A G ++A+ LF +M+ +
Sbjct: 392 WNSIIGGFAMHG-------------------------------HGDKALELFAQMKQQGF 420
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKAL 265
PD + M+ LSAC +G V+ G + +E+ YG+ + +ID+ + G I +A+
Sbjct: 421 NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAV 480
Query: 266 QVFENMK-NKSVITWTTMIAGLALH 289
+ ++M + + W ++++ LH
Sbjct: 481 DLIKSMPWEPNEVIWGSLLSACRLH 505
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 265/436 (60%), Gaps = 9/436 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F + P ++ +KA +P +A+ L+ + A D Y+F F LKA
Sbjct: 47 AHQVFDRRPTP----WHALLKAYSHGPHPQDALQLFRHARWHAA-DDTYAFTFALKACAG 101
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++H V G + +V AL+ +Y C C+ D+R F+E+ ++ N WN
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVK--NAVSWN 159
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
++ G+A G++ AR LFE M +NV+SW+ +I GY + +P EA+ LFRRM E + P
Sbjct: 160 VVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISP 219
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
EI +LA + A + +G + +GE +H Y E+ GL V + N+LID+YAK G I +L+VF
Sbjct: 220 SEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVF 279
Query: 269 ENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
+ M +++++WT++I+G A+HGL +A+++F+ M RA ++PN ITF+++L AC H GLV
Sbjct: 280 DEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLV 339
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E G +F M Y I P ++ +GC+ID+LGRAG L+EAE+++R P E NA +W +LL
Sbjct: 340 EQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLG 399
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM-RDMGVKK 446
+ YG+VE+GE ++ ++ LE G++ +LSN+ L R++++ +RK++ + VK
Sbjct: 400 CCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKS 459
Query: 447 MPGCSYIEVSKRVHEF 462
+E KR+H +
Sbjct: 460 FFNIVRMEAIKRLHAY 475
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 257/429 (59%), Gaps = 2/429 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA S+F DV +N+ I Q + + + L+ +Q ++ D + V+ A
Sbjct: 605 YARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACT 664
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+L + + ++ DV++ L+ + + A KVF +++V N+
Sbjct: 665 RLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVF--FNMKVRNIVTM 722
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+A YAK D+ +AR +F+ + +K++ISW+++I+GY+Q + ++A+ +FR+MQ VK
Sbjct: 723 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 782
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PD I + + +S+CA LGA++LG+W+H Y+ + + + N+LIDMY K G +ALQV
Sbjct: 783 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQV 842
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ MK K ++W ++I GLA +G +E+L++F M +PN +TF+ +L AC + LV
Sbjct: 843 FKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLV 902
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E G +F MK Y +EP+++ YGC++DLLGRAG L++A + + MP + + +W LL
Sbjct: 903 EEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLG 962
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
+ N +GDV + E + L +LEP NSGNY +LSN YA RW+E+ +R+ M D V+K
Sbjct: 963 SCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKS 1022
Query: 448 PGCSYIEVS 456
PGCS +E +
Sbjct: 1023 PGCSAVEAA 1031
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 208/417 (49%), Gaps = 67/417 (16%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
IV GL ++ +S+ + S + L +A+ +F P +L+N I+ L Q+D P +A
Sbjct: 477 IVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADA 536
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y K Q + PDN +FPF+LKA +++ + G ++H GL SD+ V +LI +
Sbjct: 537 IAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHL 596
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA+C + AR VFDE+ ++ +V WN+++ GY++ + ALF+L
Sbjct: 597 YAACGNLCYARSVFDEMVVK--DVVSWNSLICGYSQCNRFKDILALFKL----------- 643
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
MQ E VK D++ M+ +SAC +LG + +++ YIE Y
Sbjct: 644 --------------------MQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYC 683
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK---------------------------- 272
+ V L N L+D + + G++ A +VF NMK
Sbjct: 684 IEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFD 743
Query: 273 ---NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
K +I+W++MI+G + +AL++F +M+RA+VKP+ I +++S+C H+G ++L
Sbjct: 744 QIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDL 803
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
G+ ++ R I+ +ID+ + G +EA ++ + M E + W S++
Sbjct: 804 GKWVHEYVR-RNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMK-EKDTLSWNSII 858
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 37/286 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G +YA +F +V ++ I + P+ AV L+ ++ A + P + V+
Sbjct: 169 GEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVV 228
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A+ + I +G +H GL DV V +LI +YA I ++ +VFDE+ R N
Sbjct: 229 PALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRR-N 287
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ W ++++G+A G +A+ LF M+
Sbjct: 288 LVSWTSIISGFAMHG-------------------------------LSVKAVELFADMRR 316
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
++P+ I L+ L AC+ G VE G + + I +Y +N V +IDM ++G++
Sbjct: 317 AGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLR 376
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALHG---LGREALDMFSRMER 304
+A Q+ + + + W T++ + +G +G + +ER
Sbjct: 377 EAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALER 422
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 273/476 (57%), Gaps = 34/476 (7%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
LL+ ++ + G + A +F D+ + I Q+ A+ L+ K+
Sbjct: 142 LLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLG 201
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
+P+ ++ +LKA + GR++H ++ G D +VHV ++L+ MYA
Sbjct: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYAR-------- 253
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
W M A+ +F + KNV+SW LIAG+A+ +
Sbjct: 254 ---------------WAHM----------REAKVIFNSLAAKNVVSWNALIAGHARKGEG 288
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+ LF +M + +P + +ACA G++E G+W+H ++ + G I + N L
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMYAKSG I A +VF + + +++W ++I+G A HGLG EAL +F +M +A+V+PNE
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 408
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
ITF+++L+AC H GL++ G+ YF +MK ++ IE ++ + ++DLLGRAG L EA K +
Sbjct: 409 ITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 467
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP + AA+WG+LL + ++ +++LG A + + +L+PH+SG + +LSNIYA GR ++
Sbjct: 468 EMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSD 527
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ K+RK+M++ GVKK P CS++E+ VH FVA D SHP + + ++ KI+G++K
Sbjct: 528 AAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 583
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 166/338 (49%), Gaps = 40/338 (11%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
I +L P+ + +L L ++ GR IH + + D+ ++ ++ MYA C
Sbjct: 96 INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC-- 153
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
G L A+ LF+ M K+++SWT LI+GY+
Sbjct: 154 -------------------------------GSLEEAQDLFDKMPTKDMVSWTVLISGYS 182
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
Q Q +EA+ LF +M +P+E + + L A + G +H + +YG + V
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ ++L+DMYA+ + +A +F ++ K+V++W +IAG A G G + +F +M R
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQG 302
Query: 307 VKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+P T+ ++ +AC G +E G+ + +++KS G +P +ID+ ++G +++
Sbjct: 303 FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKS--GGQPIAYIGNTLIDMYAKSGSIKD 360
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
A+K+ RR+ + + W S+++ +G LG ALQ
Sbjct: 361 AKKVFRRL-VKQDIVSWNSIISGYAQHG---LGAEALQ 394
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D N H+ S +D + A IF + +V +N I + + + L+
Sbjct: 236 GYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLF 295
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ P ++++ V A ++E G+ +H + +G ++ LI MYA
Sbjct: 296 LQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 355
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I DA+KVF L + ++ WN++++GYA+ G
Sbjct: 356 GSIKDAKKVFRRLVKQ--DIVSWNSIISGYAQHG-------------------------- 387
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
EA+ LF +M V+P+EI L+ L+AC+ G ++ G++ ++++ +
Sbjct: 388 -----LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ 442
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
V + ++D+ ++G++ +A + E M K + W ++ +H
Sbjct: 443 VAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH 488
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 273/484 (56%), Gaps = 14/484 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N L+S ++ G A +F DV +N + + + + A L++ A
Sbjct: 197 NALMSGYV----QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---A 249
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ +R D +++ V+ + +E R + S +VAA IQ + + +
Sbjct: 250 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR----RMMDE 304
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A+++F+ + R NVA WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q
Sbjct: 305 AKELFNMMPCR--NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
E + LF M + A LS CA + A+E G +H + + G + N
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+ MY K G + A FE M+ + V++W TMIAG A HG G+EAL++F M KP
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++IT + +L+AC H GLVE G YF M +G+ K E Y CMIDLLGRAG L EA L
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
++ MPFE ++ +WG+LL AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++ K+R +M + GVKK+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 490 EHLQ 493
++
Sbjct: 663 GYVS 666
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 179/408 (43%), Gaps = 58/408 (14%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F +PD Y YNT + AL + + +A L++++ D+ ++ ++ +
Sbjct: 88 AASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHAN 143
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ L R + D ++ Y + +AR +F+ S W+V WN
Sbjct: 144 HGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN--SRTEWDVISWN 197
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+++GY + G ++ AR LF+ M ++V+SW +++GYA+ EA LF V +V
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV-- 255
Query: 209 DEIAMLAALSACAQLGAVELGEWIHN----------------YIEQYGLN------TIVP 246
A +S AQ G +E + + YI++ ++ ++P
Sbjct: 256 --FTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 313
Query: 247 LN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
N ++ YA++G + +A VF+ M K ++W M+A + G E L +F
Sbjct: 314 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 373
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID----- 355
M R N F +LS C + +E G + + ++++ YG+ GC +
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV-------GCFVGNALLA 426
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
+ + G +++A M E + W +++A +G G+ AL+
Sbjct: 427 MYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 470
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 72/336 (21%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ DA ++F + R + + +N M+AGY+ G L A +LF + + S+ TL+ A
Sbjct: 54 VADAERLFAAMPRR--STSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALA 111
Query: 187 QMDQPNEAITLFRRMQVENV---------------------------KPDEIAMLAALSA 219
+A LF M V + + D ++ L+A
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAA 171
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+ G VE + N ++ + + NAL+ Y + GK+ +A ++F+ M + V++W
Sbjct: 172 YVRNGRVEEARGLFNSRTEWDVISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSW 227
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
M++G A G EA +F + A V+ + T+ A++S G++E RR F+ M
Sbjct: 228 NIMVSGYARRGDMVEARRLF---DAAPVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPE 283
Query: 340 RYGI----------------EPK----------IEQYGCMIDLLGRAGYLQEAEKLLRRM 373
R + E K + + M+ +AG L+EA+ + M
Sbjct: 284 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 374 PFEANAAIWGSLLAASNIYG--------DVELGECA 401
P + +A W ++LAA + G +E+G C
Sbjct: 344 P-QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
+N I + ++G++ A ++F M +S T+ M+AG + +G A +F RA
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----RAIP 96
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+P+ ++ +L A + R F+ M R + Y MI G + A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVSLAR 151
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVE 396
P E +A W +LAA G VE
Sbjct: 152 HYFDLAP-EKDAVSWNGMLAAYVRNGRVE 179
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 265/449 (59%), Gaps = 21/449 (4%)
Query: 34 THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV--KLST 91
TH + + ++I C+ A ++++Q + +RP++ +F +L A L
Sbjct: 47 THSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEG 106
Query: 92 IELGREIHCQTVGTGLDSD-VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
+ G IH GLD++ V V AL+ MY+ C + A +FDE+ +R N WNTM
Sbjct: 107 LRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR--NSVSWNTM 164
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
+ G + G++ A LF+ M+E++ ISWT++I G+ + +A+ FR MQ+ V+PD
Sbjct: 165 IDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDY 224
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ +++ L+ACA LGA+ LG WI+ ++ + + ++N+LIDMY++ G I A QVFE
Sbjct: 225 VTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQ 284
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M +S+++W +MI G AL+G EAL+ F+ M + H GLV+ G
Sbjct: 285 MPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEG----------------HSGLVDEG 328
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
++F+IMK I P+IE YGC++DL RAG L++A ++ MP + N + GSLLAA
Sbjct: 329 LQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACR 388
Query: 391 IYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC 450
+GDV L E +++L +++P + NY +LSNIYA +GRW+ + K+RK M+ +G+ K PG
Sbjct: 389 THGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGF 448
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
S IE+ +HEFVAGD +H + +Y +L
Sbjct: 449 SSIEMDGSIHEFVAGDKTHVETQNIYAML 477
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
ID C G A +F S+ D + + I + A+ + ++Q + + PD
Sbjct: 165 IDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDY 224
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ VL A L + LG I+ + ++ + +LI MY+ C CI AR+VF++
Sbjct: 225 VTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQ 284
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN---------------------- 174
+ R ++ WN+M+ G+A G A F LM ++
Sbjct: 285 MPKR--SLVSWNSMIVGFALNGHAEEALEFFNLMRKEGHSGLVDEGLQFFDIMKRTRKIS 342
Query: 175 --VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
+ + L+ Y++ + +A+ + M +KP+E+ + + L+AC G V L E +
Sbjct: 343 PRIEHYGCLVDLYSRAGRLEDALNVIANMP---MKPNEVVLGSLLAACRTHGDVGLAERL 399
Query: 233 HNYIEQYGLNTIVPLNNA----LIDMYAKSGKIGKALQVFENMK 272
Y L + P +++ L ++YA G+ A +V + MK
Sbjct: 400 MKY-----LCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMK 438
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 278/493 (56%), Gaps = 39/493 (7%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
++R D +H LSR S +Y+ +F+ + P + NT I+A + P
Sbjct: 39 LIRNSDVFHHFLSRLALSLIPRDI-NYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGF 97
Query: 62 ILYNKIQASALRPDN-YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L+ ++ ++ P N S F LK +K + G +IH + G SD ++ L+ +
Sbjct: 98 RLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDL 157
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y++C+ DA KVFDE+ +++ +SW
Sbjct: 158 YSTCENSTDACKVFDEIP---------------------------------KRDTVSWNV 184
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE---NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
L + Y + + + + LF +M+ + VKPD + L AL ACA LGA++ G+ +H++I+
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ GL+ + L+N L+ MY++ G + KA QVF M+ ++V++WT +I+GLA++G G+EA++
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIE 304
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS-RYGIEPKIEQYGCMIDL 356
F+ M + + P E T +LSAC H GLV G +F+ M+S + I+P + YGC++DL
Sbjct: 305 AFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDL 364
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRA L +A L++ M + ++ IW +LL A ++GDVELGE + HLI+L+ +G+Y
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY 424
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+L N Y+ +G+W + ++R +M++ + PGCS IE+ VHEF+ D SHP + +Y
Sbjct: 425 VLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY 484
Query: 477 QILCKINGQMKFA 489
++L +IN Q+K A
Sbjct: 485 KMLAEINQQLKIA 497
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 262/466 (56%), Gaps = 35/466 (7%)
Query: 26 SDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
+ Y+ F S P V YNT I+A +D+P ++LY ++ + D S F +K+
Sbjct: 54 ASYSQRFFGQLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKS 113
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
++ + G ++HC G D ++ A++ +Y+ C+ DA KVFDE
Sbjct: 114 CIRFLYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDE--------- 164
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
M ++ ++W +I+ + ++ +A++LF MQ +
Sbjct: 165 ------------------------MPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQGSS 200
Query: 206 VK--PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
K PD++ L L ACA L A+E GE IH YI + G + L N+LI MY++ G + K
Sbjct: 201 YKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGCLDK 260
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +VF+ M NK+V++W+ MI+GLA++G GREA++ F M R V P++ TF +LSAC +
Sbjct: 261 AYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSY 320
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G+V+ G +F+ M +G+ P + YGCM+DLLGRAG L +A +L+ M + ++ +W
Sbjct: 321 SGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWR 380
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A I+G V LGE + HLI+L+ +G+Y +L NIY+ G W + ++RK+M++
Sbjct: 381 TLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKS 440
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++ PGCS IE+ VHEFV D SH +Y+ L +IN Q++ A
Sbjct: 441 IQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIA 486
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 115/239 (48%), Gaps = 6/239 (2%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
D + ++ F ++ V + T+I + D P + + L+R M+ + D ++ A+
Sbjct: 53 DASYSQRFFGQLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVK 112
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
+C + + G +H I + G L A++D+Y+ + G A +VF+ M ++ +
Sbjct: 113 SCIRFLYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVA 172
Query: 279 WTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAILSACCHVGLVELGRRYFNI 336
W MI+ + R+AL +F M+ + + +P+++T + +L AC H+ +E G R
Sbjct: 173 WNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGY 232
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYG 393
+ R G + +I + R G L +A ++ + M N W ++++ A N YG
Sbjct: 233 IMER-GYRDALNLCNSLISMYSRCGCLDKAYEVFKGMG-NKNVVSWSAMISGLAMNGYG 289
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 262/482 (54%), Gaps = 37/482 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL + +L+ I+ SS + A S+ K D +NT I P A+
Sbjct: 123 GLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQ 182
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++++ + D+ + L A + +++G+ H V G + + ++ ++LI MYA
Sbjct: 183 AFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYA 242
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
K G + +AR +F+ M ++N + WT++I
Sbjct: 243 ---------------------------------KCGQVEDARRIFDGMPDRNAVCWTSMI 269
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
+GY Q+ Q EAI LFR MQ+ VK D+ + +S+C Q+GA++LG ++H Y + +GL
Sbjct: 270 SGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLG 329
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + N+LIDMY+K G I KA +F M + +WT +I G A +GL EALD+F++M
Sbjct: 330 KDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWT-VIMGFAANGLSGEALDLFAQM 388
Query: 303 ER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
E V PNEITF+ +L++C H GLVE G R+F+ M S YGI P+IE YGCM+DLLGRA
Sbjct: 389 EEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAK 448
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L EAE+ ++ MP +A +W SLL A G+V L E + + LEP+ G +LS
Sbjct: 449 LLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLST 508
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+YA RW ++ K+R + K PGCS+IEV VHEF AGD SH + + +Y L
Sbjct: 509 VYATTSRWVDANKVRTGIYSGRKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTLLG 568
Query: 482 IN 483
IN
Sbjct: 569 IN 570
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 46/357 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G + N ++ S I + G + A IF + + + I Q A
Sbjct: 222 LVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEA 281
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +Q + ++ D+ + V+ + ++ ++LGR +H GL D+ V +LI M
Sbjct: 282 IKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDM 341
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C GD+ A +F M +++ SW T
Sbjct: 342 YSKC---------------------------------GDIKKAYDIFCGMVKRDNFSW-T 367
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQ 238
+I G+A EA+ LF +M+ E V P+EI L L++C+ G VE G H
Sbjct: 368 VIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSI 427
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALD 297
YG+ + ++D+ ++ + +A Q + M + W +++ A G L
Sbjct: 428 YGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL--FACRTCGEVGLA 485
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP--KIEQYGC 352
+ ++PN+ +LS + R+ + K R GI K +Q GC
Sbjct: 486 EYVAERIQVLEPNKCGGDVLLST-----VYATTSRWVDANKVRTGIYSGRKTKQPGC 537
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 273/484 (56%), Gaps = 14/484 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N L+S ++ G A +F DV +N + + + + A L++ A
Sbjct: 197 NALMSGYV----QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---A 249
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ +R D +++ V+ + +E R + S +VAA IQ + + +
Sbjct: 250 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR----RMMDE 304
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A+++F+ + R NVA WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q
Sbjct: 305 AKELFNMMPCR--NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
E + LF M + A LS CA + A+E G +H + + G + N
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+ MY K G + A FE M+ + V++W TMIAG A HG G+EAL++F M KP
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++IT + +L+AC H GLVE G YF M +G+ K E Y CMIDLLGRAG L EA L
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
++ MPFE ++ +WG+LL AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++ K+R +M + GVKK+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 490 EHLQ 493
++
Sbjct: 663 GYVS 666
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 178/408 (43%), Gaps = 58/408 (14%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A S+F +PD Y YNT + AL + + +A L++++ D+ ++ ++ +
Sbjct: 88 AASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHAN 143
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ L R + D ++ Y + +AR +F+ S W+ WN
Sbjct: 144 HGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN--SRTEWDAISWN 197
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+++GY + G ++ AR LF+ M ++V+SW +++GYA+ EA LF V +V
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV-- 255
Query: 209 DEIAMLAALSACAQLGAVELGEWIHN----------------YIEQYGLN------TIVP 246
A +S AQ G +E + + YI++ ++ ++P
Sbjct: 256 --FTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 313
Query: 247 LN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
N ++ YA++G + +A VF+ M K ++W M+A + G E L +F
Sbjct: 314 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 373
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID----- 355
M R N F +LS C + +E G + + ++++ YG+ GC +
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV-------GCFVGNALLA 426
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
+ + G +++A M E + W +++A +G G+ AL+
Sbjct: 427 MYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 470
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 72/336 (21%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ DA ++F + R + + +N M+AGY+ G L A +LF + + S+ TL+ A
Sbjct: 54 VADAERLFAAMPRR--STSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALA 111
Query: 187 QMDQPNEAITLFRRMQVENV---------------------------KPDEIAMLAALSA 219
+A LF M V + + D ++ L+A
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAA 171
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+ G VE + N ++ + NAL+ Y + GK+ +A ++F+ M + V++W
Sbjct: 172 YVRNGRVEEARGLFNSRTEWDAISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSW 227
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
M++G A G EA +F + A V+ + T+ A++S G++E RR F+ M
Sbjct: 228 NIMVSGYARRGDMVEARRLF---DAAPVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPE 283
Query: 340 RYGI----------------EPK----------IEQYGCMIDLLGRAGYLQEAEKLLRRM 373
R + E K + + M+ +AG L+EA+ + M
Sbjct: 284 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 374 PFEANAAIWGSLLAASNIYG--------DVELGECA 401
P + +A W ++LAA + G +E+G C
Sbjct: 344 P-QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
+N I + ++G++ A ++F M +S T+ M+AG + +G A +F RA
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----RAIP 96
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+P+ ++ +L A + R F+ M R + Y MI G + A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVSLAR 151
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVE 396
P E +A W +LAA G VE
Sbjct: 152 HYFDLAP-EKDAVSWNGMLAAYVRNGRVE 179
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 297/556 (53%), Gaps = 70/556 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDS-CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALC-QTDNPL 58
+IV GL Q+ + I CS A +F H PD + NT I+A + D P
Sbjct: 30 LIVSGLSQHPLFATSAIKKLCSHSVTFPRATFLFDHLHHPDAFHCNTIIRAYARKPDFPA 89
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
Y K+ A ++ P++Y+FP ++K + + G + H + V G SD+ +LI
Sbjct: 90 ALRFYYCKMLARSVPPNHYTFPLLIKVCTDIGSFREGLKGHARIVKFGFGSDLFARNSLI 149
Query: 119 QMYA------SCKCIYD-------------------------ARKVFDELSLRVWNVAVW 147
+MY+ + + ++D ARKVF+E+ R +V W
Sbjct: 150 RMYSVFGRIGNARMVFDESCWLDLVSYNSMIDGYVKNGEIGAARKVFNEMPDR--DVLSW 207
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ--VEN 205
N ++AGY VGDL+ A LFE + E++ +SW +I G A++ + A+ F RM V N
Sbjct: 208 NCLIAGYVGVGDLDAANELFETIPERDAVSWNCMIDGCARVGNVSLAVKFFDRMPAAVRN 267
Query: 206 VK--------------------------------PDEIAMLAALSACAQLGAVELGEWIH 233
V P+E +++ L+ACA LG + +G W+H
Sbjct: 268 VVSWNSVLALHARVKNYGECLMLFGKMVEGREAVPNEATLVSVLTACANLGKLSMGMWVH 327
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
++I + V L L+ MYAK G + A VF+ M +SV++W +MI G LHG+G
Sbjct: 328 SFIRSNNIKPDVLLLTCLLTMYAKCGAMDLAKGVFDEMPVRSVVSWNSMIMGYGLHGIGD 387
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCM 353
+AL++F ME+A +PN+ TFI++LSAC H G+V G YF++M+ Y IEPK+E YGCM
Sbjct: 388 KALELFLEMEKAGQQPNDATFISVLSACTHAGMVMEGWWYFDLMQRVYKIEPKVEHYGCM 447
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNS 413
+DLL RAG ++ +E+L+R +P +A +AIWG+LL+ + + D ELGE + I+LEP +
Sbjct: 448 VDLLARAGLVENSEELIRMVPVKAGSAIWGALLSGCSNHLDSELGEIVAKRFIELEPQDI 507
Query: 414 GNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFD 473
G Y +LSN+YA GRW++ +R ++++ G++K S + + ++V ++ +
Sbjct: 508 GPYILLSNMYAAKGRWDDVEHVRLMIKEKGLQKEAASSLVHLEDFESKYVKNNSGYRK-K 566
Query: 474 RLYQILCKINGQMKFA 489
+Y +L ++ QMK +
Sbjct: 567 IMYSMLSELGTQMKLS 582
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 295/582 (50%), Gaps = 100/582 (17%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S SC+++G S K + YN I C+ N A+ L N+ L
Sbjct: 45 SNLYHSCATIGTSVLPSETIDCK----ITDYNIEICRFCELGNLRRAMELINQSPKPDLE 100
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC------KCI 127
Y VL+ L +I+ GR IH ++ D + + L+ MY +C + I
Sbjct: 101 LRTYCS--VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158
Query: 128 YD-------------------------------------------ARKVFDELSLRVWNV 144
+D ARK+FDEL R +V
Sbjct: 159 FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDR--DV 216
Query: 145 AVWNTMVAGY-------------------------------------------AKVGDLN 161
WN+M++GY +K G+LN
Sbjct: 217 ISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLN 276
Query: 162 NARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA 221
+A +FE M E++V+SWT++IAGYA+ + ++ LF M+ E++ P+ I M L ACA
Sbjct: 277 SAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACA 336
Query: 222 QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTT 281
L A+E G+ IH +I + G + + NAL+DMY K G +G A +F+ + K +++WT
Sbjct: 337 SLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTV 396
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
MIAG +HG G EA+ F+ M + ++P+E++FI+IL AC H GL++ G +FN+M++
Sbjct: 397 MIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNC 456
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 401
IEPK E Y C++DLL RAG L +A K ++ MP E +A IWG+LL IY DV+L E
Sbjct: 457 CIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKV 516
Query: 402 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 461
+H+ +LEP N+G Y +L+NIYA +W E K+R+ + G++K PGCS+IE+ +VH
Sbjct: 517 AEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHI 576
Query: 462 FVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
FV GD+SHP +++ +L K +MK H ++++D
Sbjct: 577 FVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKAD 618
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 43/293 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ L NN LL D S G + A +F + V + + I + +
Sbjct: 254 MVSVELTLNNCLL----DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMS 309
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+++++ L P++ + +L A L+ +E G+EIH + G D HV AL+ M
Sbjct: 310 VRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDM 369
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C + AR +FD + + ++ W M+AGY
Sbjct: 370 YLKCGALGLARLLFDMIPEK--DLVSWTVMIAGYG------------------------- 402
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+ GY +EAI F M+ ++PDE++ ++ L AC+ G ++ G N +
Sbjct: 403 -MHGYG-----SEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNC 456
Query: 241 LNTIVPLNN---ALIDMYAKSGKIGKALQVFENMKNKSVIT-WTTMIAGLALH 289
I P + ++D+ A++G + KA + + M + T W ++ G ++
Sbjct: 457 --CIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIY 507
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 283/504 (56%), Gaps = 12/504 (2%)
Query: 8 QNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKI 67
+N H + I + S G + A+++ KP++ YN+ I L ++ ++ +
Sbjct: 78 KNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTM 137
Query: 68 --QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
Q S + D ++ ++ + L EL R++H + GL+S++ + ALI Y C
Sbjct: 138 LKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCG 197
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ +F + R +V W +MVA YA+ L +A LF M EKN +SWT LIAG+
Sbjct: 198 EPDISFSIFSRMPER--DVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGF 255
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-----YG 240
AQ + +EA+ LF +M+ E + P + LSACA L + G+ IH +I + Y
Sbjct: 256 AQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYF 315
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
N + NALIDMY K G++ A +F+ M K +++W ++I G A +G G E+L +F
Sbjct: 316 CNIFIL--NALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFE 373
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
RM A ++PN +TF+ +LSACCH GLV G R + M+ YG+ P+ + Y MIDLLGR
Sbjct: 374 RMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRN 433
Query: 361 GYLQEAEKLLRRMPFEAN-AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
L+EA L++R P ++ +WG+LL A I+G+++L A + L +LEP N+ Y ++
Sbjct: 434 NRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMV 493
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
NIYA RW+E+ ++R++M + G++K CS+IEV H+FVA + SH + +Y+++
Sbjct: 494 YNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVI 553
Query: 480 CKINGQMKFAEHLQNEFSGVLESD 503
+ QM + +L S + E D
Sbjct: 554 HNLVDQMYDSGYLPCHSSFLPEED 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 50/371 (13%)
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
S+L P + + ++ + ++LG+ +H + T L + LI Y+ C I
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQS 67
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A KVF L ++ N WN +++ Y++ G N A L + M + N++S+ +LI+G
Sbjct: 68 AHKVFHVLPVK--NTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHG 125
Query: 190 QPNEAITLFRRM--QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
E++ +F+ M Q NV DE +++ + +CA LGA EL +H GLN+ + +
Sbjct: 126 FRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIII 185
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM------------------------- 282
NALID Y K G+ + +F M + V++WT+M
Sbjct: 186 GNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNT 245
Query: 283 ------IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
IAG A +G G EAL +F +M + P+ TF ++LSAC + L+ G+
Sbjct: 246 VSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHG- 304
Query: 337 MKSRYGIEPKIEQYGC-------MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA-- 387
+ I Y C +ID+ + G ++ A L + M E + W SL+
Sbjct: 305 ----HIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLITGF 359
Query: 388 ASNIYGDVELG 398
A N +G+ L
Sbjct: 360 AQNGHGEESLA 370
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 141/342 (41%), Gaps = 73/342 (21%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I+ GL+ N + + ID+ G D ++SIF+ + DV + + + A Q +A
Sbjct: 175 IIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAH 234
Query: 62 ILYNKIQ-------------------------------ASALRPDNYSFPFVLKAVVKLS 90
L++++Q + P ++F VL A L+
Sbjct: 235 WLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLA 294
Query: 91 TIELGREIHCQTV-GTGLD--SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
I G+EIH + T +D ++ ++ ALI MY C + A +F + + ++ W
Sbjct: 295 LIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEK--DIVSW 352
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N+++ G+A+ G E++ +F RM +++
Sbjct: 353 NSLITGFAQNG-------------------------------HGEESLAVFERMIEADIR 381
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQ 266
P+ + L LSAC G V G I + +E+ YG+ +ID+ ++ ++ +A+
Sbjct: 382 PNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMG 441
Query: 267 VFENMKNKS--VITWTTMIAGLALHG---LGREALDMFSRME 303
+ + S V W ++ +HG L R A ++ ++E
Sbjct: 442 LIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLE 483
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 275/489 (56%), Gaps = 39/489 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G DQ+ L ++ I S LG DYA +F K +Y++N +AL + + LY
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 65 NKIQASALRPDNYSFPFVLKAVV----KLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
K+ + D +++ +VLKA V ++ + G+EIH G S V+++ L+ M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C+ A VF + +R NV W+ M+A YAK N +A
Sbjct: 227 YARFGCVDYASYVFGGMPVR--NVVSWSAMIACYAK-----NGKAF-------------- 265
Query: 181 LIAGYAQMDQPNEAITLFRRM--QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
EA+ FR M + ++ P+ + M++ L ACA L A+E G+ IH YI +
Sbjct: 266 ------------EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL++I+P+ +AL+ MY + GK+ +VF+ M ++ V++W ++I+ +HG G++A+ +
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M P +TF+++L AC H GLVE G+R F M +GI+P+IE Y CM+DLLG
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RA L EA K+++ M E +WGSLL + I+G+VEL E A + L LEP N+GNY +
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L++IYA W+E +++K++ G++K+PG ++EV ++++ FV+ D +P ++++
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553
Query: 479 LCKINGQMK 487
L K+ MK
Sbjct: 554 LVKLAEDMK 562
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 10/216 (4%)
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
IS LI + + +AI + + + + E+ +L C ++ +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILC----CGHRSSLSDALRVHRH 102
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I G + L LI MY+ G + A +VF+ + +++ W + L L G G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 296 LDMFSRMERARVKPNEITFIAILSAC----CHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
L ++ +M R V+ + T+ +L AC C V + G+ + +R G +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE-IHAHLTRRGYSSHVYIMT 221
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
++D+ R G + A + MP N W +++A
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 258/458 (56%), Gaps = 35/458 (7%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L R C S+ + H+ D+ + T I+A + AV + ++ L
Sbjct: 152 LMRLYSVCGSIHDVQKVFDECPHR---DLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRL 208
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
R D + VL A L + LG+++H + I+ Y K
Sbjct: 209 RADGRTLVVVLSACSNLGDLNLGQKVH----------------SYIRHYIDMKA------ 246
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+V V N ++ Y K DLN+A +F+ M KNV++W +I+G A +
Sbjct: 247 ----------DVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYR 296
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ FR MQ + VKPDE+ ++ L++CA LG +E+G+W+H Y+ + + + NAL+
Sbjct: 297 EALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALL 356
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G I +A +VFE+MK + V ++T MI GLALHG A +FS M R ++PNE+
Sbjct: 357 DMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEV 416
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +L AC H GLV G++YF M +Y + P+ E YGCMIDLLGRAG ++EAE+++ +
Sbjct: 417 TFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHK 476
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
M + G+LL A I+G+V++GE +Q L +L+P G Y +++N+Y+ + RW ++
Sbjct: 477 MEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDA 536
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
KIRK M++ ++K PGCS IEV VHEF GD SHP
Sbjct: 537 LKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHP 574
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 183/355 (51%), Gaps = 38/355 (10%)
Query: 34 THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE 93
+H ++ + L N I+++ + L+ + N++ L PD ++ P VLKA+ + I
Sbjct: 68 SHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIR 127
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
G++IH +++ TG+ +NV V NT++
Sbjct: 128 EGQQIHARSIKTGMVG--------------------------------FNVYVSNTLMRL 155
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
Y+ G +++ + +F+ ++++SWTTLI + + + A+ F M ++ D +
Sbjct: 156 YSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTL 215
Query: 214 LAALSACAQLGAVELGEWIHNYIEQY-GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ LSAC+ LG + LG+ +H+YI Y + V + NAL+DMY K + A +VF+ M
Sbjct: 216 VVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMP 275
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
K+V+TW MI+GLA G REALD F M+ VKP+E+T + +L++C ++G++E+G+
Sbjct: 276 VKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKW 335
Query: 333 YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA----EKLLRRMPFEANAAIWG 383
M+ + + K ++D+ + G + EA E + RR + A I+G
Sbjct: 336 VHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFG 389
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 259/427 (60%), Gaps = 10/427 (2%)
Query: 33 FTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA-LRPDNYSFPFVLKAVVKLST 91
F + V +N + Q P + L+N + + ++PD ++ V+ + L
Sbjct: 208 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD 267
Query: 92 IELGREIHCQ-TVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV-WNT 149
L I + G + V AL+ M+A C + A K+F++L + + +V WN
Sbjct: 268 PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 327
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVENVK 207
M++ YA+VGDL +A+ LF+ M +++ +SW ++IAGY Q + +AI LF M ++ K
Sbjct: 328 MISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRK 387
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PDE+ M++ SAC LG + LG W + ++ + + + N+LI+MY++ G + A+ +
Sbjct: 388 PDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLI 447
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ M + ++++ T+I+G A HG G E++++ S+M+ ++P+ IT+IAIL+AC H GL+
Sbjct: 448 FQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLL 507
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G+R F +K P ++ Y CMID+LGRAG L+EA KL++ MP E +A I+GSLL
Sbjct: 508 DEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLN 562
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A++I+ VELGE A L K+EPHNSGNYA+LSNIYA GRW E K+R MR GVKK
Sbjct: 563 ATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKT 622
Query: 448 PGCSYIE 454
G S++E
Sbjct: 623 TGLSWLE 629
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 201/449 (44%), Gaps = 84/449 (18%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSS-LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNP 57
++ L NH + + C+ L S Y IF + PDV ++ +K Q +
Sbjct: 11 LVHHSLHHQNHWVVLLLTQCTRFLAPSSYTCHIFHAATHPDVRVFTFMLKYYSQIGVHSQ 70
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+ + + +Q ++P+ + ++K+ S + L + +G D D +V +
Sbjct: 71 VFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLA-----HVLKSGYDRDHYVRNGI 125
Query: 118 IQMYASCKCIYDARKVFDELSLRV---WNVAV---------------------------- 146
+ +YA I ARK+FDE+ R WNV +
Sbjct: 126 LGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNV 185
Query: 147 --WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QV 203
W TM+ G+AK G+L AR F+ M E++V+SW +++GYAQ P E I LF M
Sbjct: 186 ITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 245
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWI------------------------------- 232
NV+PDE +S+C+ LG L E I
Sbjct: 246 GNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLE 305
Query: 233 --HNYIEQYGL---NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
H EQ G+ + VP NA+I YA+ G + A +F+ M + ++W +MIAG
Sbjct: 306 AAHKIFEQLGVYKYRSSVPW-NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYT 364
Query: 288 LHGLGREALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
+G +A+ +F M E +R KP+E+T +++ SAC H+G + LG +I+K + I+
Sbjct: 365 QNGESFKAIKLFEEMISSEDSR-KPDEVTMVSVFSACGHLGELGLGNWAVSILKVNH-IQ 422
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
I Y +I++ R G +Q+A + + M
Sbjct: 423 ISISVYNSLINMYSRCGSMQDAVLIFQEM 451
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 264/442 (59%), Gaps = 6/442 (1%)
Query: 53 QTDNPLNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG---LD 108
+ D P A L + + +A P++ + VL A + L R +
Sbjct: 44 EGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARPLALSLHALAAKLFP 103
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
S + + L + Y + + + A ++F +++R ++ +NTM+ G + G + AR +F+
Sbjct: 104 SHLLLCTCLARFYLASRLPHLALQLFGSMTVR--SLVTYNTMITGLMRNGLVAAAREVFD 161
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
M E + +SWT LI G + + +EAI F M ++ V+PD + ++AA+SACA++GA+ L
Sbjct: 162 GMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAAISACAEVGALGL 221
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
G W+H + + L + + N+LIDMYA+ G++ A QVF++M+N++V++W +MI G A
Sbjct: 222 GMWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQVFDSMRNRTVVSWNSMIVGFAA 281
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+G +A++ F M R +P+ +TF +L+AC H GL + G RY+ M++ +GI ++E
Sbjct: 282 NGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGLTDEGLRYYKAMRAEHGITARME 341
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
YGC++DLLGRAG L EA ++ MP N + G+LLA ++GDV++ E +QHL++
Sbjct: 342 HYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLAGCRMHGDVDMAEQLMQHLLEQ 401
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
+P NY +LSNIYA G+W+ +GK+R +M+ GVKK PG S +E+ VHEFV GD S
Sbjct: 402 DPGGDSNYVLLSNIYAATGKWDGAGKVRGLMKARGVKKRPGRSAVEIDGDVHEFVCGDRS 461
Query: 469 HPDFDRLYQILCKINGQMKFAE 490
HP D ++ +L ++ +M E
Sbjct: 462 HPQADEVFDMLGLLSHEMAGRE 483
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR L N +++ + + G A +F +PD + I + A
Sbjct: 132 MTVRSLVTYNTMITGLMRN----GLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEA 187
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ + + PD + + A ++ + LG +H L+ ++ + +LI M
Sbjct: 188 IDCFHAMLLDGVEPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEGNIRIANSLIDM 247
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + AR+VFD S+R V WN+M+ G+A G +A FE M K
Sbjct: 248 YARCGQVEFARQVFD--SMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKG------ 299
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QY 239
FR PD + L+AC+ G + G + + ++
Sbjct: 300 -----------------FR--------PDAVTFTGVLTACSHAGLTDEGLRYYKAMRAEH 334
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
G+ + ++D+ ++G++G+A+ V M + + + ++AG +HG
Sbjct: 335 GITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLAGCRMHG 386
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 37/236 (15%)
Query: 174 NVISWTTLIAGYA-QMDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELG-- 229
+V+SWT IA A + D P A L + P+++ +L LSACA + L
Sbjct: 30 DVVSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARP 89
Query: 230 ------------------------------EWIHNYIEQYGLNTIVPL--NNALIDMYAK 257
H ++ +G T+ L N +I +
Sbjct: 90 LALSLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMR 149
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
+G + A +VF+ M ++WT +I G +G EA+D F M V+P+ +T +A
Sbjct: 150 NGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAA 209
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+SAC VG + LG + + + +R +E I +ID+ R G ++ A ++ M
Sbjct: 210 ISACAEVGALGLG-MWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQVFDSM 264
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 265/483 (54%), Gaps = 34/483 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL + + S F+ G D A IF + +V +N I + Q A+ L+
Sbjct: 365 GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLF 424
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ PD +F +L A V +E +E+H + GL D+ V AL+ MYA
Sbjct: 425 LQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYA-- 481
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
K G+ A+ +F+ M E+NV +WT +I+G
Sbjct: 482 -------------------------------KCGNTMYAKQVFDDMVERNVTTWTVMISG 510
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
AQ +EA +LF +M E + PD ++ LSACA GA+E + +H++ GL +
Sbjct: 511 LAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD 570
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + NAL+ MYAK G + A +VF++M + V +WT MI GLA HG G +ALD+F +M+
Sbjct: 571 LRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKL 630
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
KPN +F+A+LSAC H GLV+ GRR F + YGIEP +E Y CM+DLLGRAG L+
Sbjct: 631 EGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLE 690
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA+ + MP E A WG+LL A YG++E+ E A + +KL+P ++ Y +LSNIYA
Sbjct: 691 EAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYA 750
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
G W + +R +M+ G++K PG S+IEV ++H FV GDTSHP+ +Y L +
Sbjct: 751 ATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIK 810
Query: 485 QMK 487
++K
Sbjct: 811 RLK 813
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 148/309 (47%), Gaps = 37/309 (11%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C S+ D A +F DV +N I L Q A ++ K+Q PD+ ++
Sbjct: 282 CGSI---DDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTY 338
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
+L V E +E+H V GL SD+ V +A + MY C I DA+ +FD+L++
Sbjct: 339 LSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV 398
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
R NV WN M I G AQ EA++LF
Sbjct: 399 R--NVTTWNAM-------------------------------IGGVAQQKCGREALSLFL 425
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+M+ E PD + LSA A+E + +H+Y GL + + NAL+ MYAK G
Sbjct: 426 QMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDL-RVGNALVHMYAKCG 484
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
A QVF++M ++V TWT MI+GLA HG G EA +F +M R + P+ T+++ILS
Sbjct: 485 NTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILS 544
Query: 320 ACCHVGLVE 328
AC G +E
Sbjct: 545 ACASTGALE 553
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 183/392 (46%), Gaps = 44/392 (11%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+A+ +Y++++ +P+ ++ +LKA +++ G++IH + +G SDV V AL+
Sbjct: 13 DAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALV 72
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY C G +++A+ +F+ M E+NVISW
Sbjct: 73 NMYVKC---------------------------------GSIDDAQLIFDKMVERNVISW 99
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T +I G A + EA F +MQ E P+ ++ L+A A GA+E + +H++
Sbjct: 100 TVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN 159
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL + + NAL+ MYAKSG I A VF+ M + + +WT MI GLA HG G+EA +
Sbjct: 160 AGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSL 219
Query: 299 FSRMERARVKPNEITFIAIL--SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
F +MER PN T+++IL SA G +E + + G + +I +
Sbjct: 220 FLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHK-HAGKAGFISDLRVGNALIHM 278
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH----N 412
+ G + +A + M + + W +++ G G A +K++ +
Sbjct: 279 YAKCGSIDDARLVFDGMC-DRDVISWNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPD 334
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
S Y L N + G W ++ K ++G+
Sbjct: 335 STTYLSLLNTHVSTGAWEWVKEVHKHAVEVGL 366
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 194/458 (42%), Gaps = 79/458 (17%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + D++ + I L Q A L+ +++ P+ ++ +L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 84 KAVVKLST--IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
A ST +E +E+H G SD+ V ALI MYA
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYA------------------- 280
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
K G +++AR +F+ M +++VISW +I G AQ +EA T+F +M
Sbjct: 281 --------------KCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKM 326
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
Q E PD L+ L+ GA E + +H + + GL + + + +A + MY + G I
Sbjct: 327 QQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSI 386
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA- 320
A +F+ + ++V TW MI G+A GREAL +F +M R P+ TF+ ILSA
Sbjct: 387 DDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSAN 446
Query: 321 ---------------CCHVGLVELGRRYFNIMKSRYG---------------IEPKIEQY 350
GLV+L R N + Y +E + +
Sbjct: 447 VGEEALEWVKEVHSYAIDAGLVDL--RVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTW 504
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEA---NAAIWGSLLAASNIYGDVELGECALQHLIK 407
MI L + G EA L +M E +A + S+L+A G +E + H +
Sbjct: 505 TVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAV- 563
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKI---RKVMRDM 442
N+G + L A++ + + G + R+V DM
Sbjct: 564 ----NAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM 597
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 167/390 (42%), Gaps = 37/390 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G + + + ++ G D A IF + +V + I L A
Sbjct: 56 IIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEA 115
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++Q P++Y++ +L A +E +E+H V GL D+ V AL+ M
Sbjct: 116 FHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHM 175
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA I DAR VFD + R ++ W M+ G A+ G
Sbjct: 176 YAKSGSIDDARVVFDGMVER--DIFSWTVMIGGLAQHG---------------------- 211
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACA--QLGAVELGEWIHNYIEQ 238
+ EA +LF +M+ P+ L+ L+A A GA+E + +H + +
Sbjct: 212 ---------RGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGK 262
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G + + + NALI MYAK G I A VF+ M ++ VI+W MI GLA +G G EA +
Sbjct: 263 AGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTI 322
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F +M++ P+ T++++L+ G E + G+ + + +
Sbjct: 323 FLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK-HAVEVGLVSDLRVGSAFVHMYI 381
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
R G + +A+ + ++ N W +++
Sbjct: 382 RCGSIDDAQLIFDKLAVR-NVTTWNAMIGG 410
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 89/148 (60%)
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I GYA+ +A+ ++ +M+ E +P+EI L+ L AC +++ G+ IH +I Q G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V + AL++MY K G I A +F+ M ++VI+WT MI GLA +G G+EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 301 RMERARVKPNEITFIAILSACCHVGLVE 328
+M+R PN T+++IL+A G +E
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALE 148
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSR 340
MI G A +G +A+ ++S+M R +PNEIT+++IL ACC ++ G++ + +I++S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 400
+ + ++E ++++ + G + +A+ + +M E N W ++ YG G+
Sbjct: 61 FQSDVRVET--ALVNMYVKCGSIDDAQLIFDKM-VERNVISWTVMIGGLAHYGR---GQE 114
Query: 401 ALQHLIKLEPH----NSGNYAILSNIYAILG 427
A ++++ NS Y + N A G
Sbjct: 115 AFHRFLQMQREGFIPNSYTYVSILNANASAG 145
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 258/461 (55%), Gaps = 33/461 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY +F + D +N I AL Q + + + N++ S + PD++++ VLKA
Sbjct: 407 AYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAG 466
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++E G +H + + +GL D V + ++ MY CKC
Sbjct: 467 LQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMY--CKC---------------------- 502
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G + A+ L + + + ++SW ++I+G++ Q EA F M VKP
Sbjct: 503 ---------GAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKP 553
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D L CA L +ELG+ IH I + + +++ L+DMYAK G + +L +F
Sbjct: 554 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMF 613
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
E + ++W MI G ALHG G EAL+MF RM+RA V PN TF+A+L AC HVGL++
Sbjct: 614 EKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLD 673
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G +YF++M SRY + P++E + CM+D+LGR+ QEA + +R MP EA+A +W +LL+
Sbjct: 674 DGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSI 733
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
I DVE+ E A ++++L+P ++ Y +LSN+YA G+W + + R++MR ++K P
Sbjct: 734 CKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEP 793
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
GCS+IEV +H F+ GD HP +Y++L + G+MK +
Sbjct: 794 GCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLS 834
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 49/384 (12%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N +L+ ++ + G +D A S+F PDV +NT I CQ N+V L ++
Sbjct: 89 NTMLTAYVHA----GDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSR 144
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ D + +LK+ L + LG +IH V TGL++DV +AL+ MY C+ + D
Sbjct: 145 RGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDD 204
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A + F M E+N +SW IAG Q +
Sbjct: 205 ALR---------------------------------FFHGMGERNSVSWGAAIAGCVQNE 231
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
Q + LF +MQ + + A +A +CA + + +H + + ++ +
Sbjct: 232 QYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGT 291
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
A++D+YAK+G + A + F + + +V T M+ GL GLG EA+ +F M R+ V
Sbjct: 292 AIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGF 351
Query: 310 NEITFIAILSACCHVGLVELGRRYF-----NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ I+ + SAC V + YF + + + G + + ++DL G+ L
Sbjct: 352 DVISLSGVFSACAEV------KGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALV 405
Query: 365 EAEKLLRRMPFEANAAIWGSLLAA 388
EA + + M + ++ W +++AA
Sbjct: 406 EAYLVFQEME-QRDSVSWNAIIAA 428
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 5/300 (1%)
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+S + L A S + G+ H + + +G V L+QMYA C A VFD
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ R + WNTM+ Y GD + A +LF M + +V+SW TLI+GY Q ++
Sbjct: 79 TMPHR--DTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSV 136
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L M V D + L +C L + LG IH + GL T V +AL+DMY
Sbjct: 137 GLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMY 196
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
K + AL+ F M ++ ++W IAG + +++F +M+R + ++ +
Sbjct: 197 GKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYA 256
Query: 316 AILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
+ +C + + R+ + + +K+ + + + ++D+ +AG L +A + +P
Sbjct: 257 SAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGT--AIVDVYAKAGNLVDARRAFIGLP 314
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 157/353 (44%), Gaps = 43/353 (12%)
Query: 45 NTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
N + L +T A+ L+ + S + D S V A ++ G ++HC V
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVK 381
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
+G D DV V A++ +Y CK + +A V
Sbjct: 382 SGFDVDVCVRNAILDLYGKCKALVEAYLV------------------------------- 410
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
F+ M +++ +SW +IA Q + + I M ++PD+ + L ACA L
Sbjct: 411 --FQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQ 468
Query: 225 AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIA 284
++E G +H + GL +++ ++DMY K G I +A ++ + + + +++W ++I+
Sbjct: 469 SLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIIS 528
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGI 343
G +L EA FS M VKP+ T+ +L C ++ +ELG++ + I+K
Sbjct: 529 GFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLG 588
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLL---RRMPFEANAAIWGSLLAASNIYG 393
+ I ++D+ + G + ++ + R++ F + W +++ ++G
Sbjct: 589 DEYISS--TLVDMYAKCGNMPDSLLMFEKARKLDFVS----WNAMICGYALHG 635
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 173/387 (44%), Gaps = 27/387 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M RG+ + L+ + SC G D A + H +K +TD +
Sbjct: 142 MSRRGVALDRTTLAVLLKSCG--GLDDLALGVQIHA---------LAVKTGLETDVRAGS 190
Query: 61 VI--LYNKIQA--SALR-------PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDS 109
+ +Y K ++ ALR ++ S+ + V+ G E+ Q GL
Sbjct: 191 ALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGV 250
Query: 110 DVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV--AVWNTMVAGYAKVGDLNNARALF 167
A+ + A+ C+ AR++ V++ V +V YAK G+L +AR F
Sbjct: 251 SQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAF 310
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
+ NV + ++ G + EA+ LF+ M V D I++ SACA++
Sbjct: 311 IGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYF 370
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
G +H + G + V + NA++D+Y K + +A VF+ M+ + ++W +IA L
Sbjct: 371 QGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALE 430
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPK 346
+ + + + M R+ ++P++ T+ ++L AC + +E G + +KS G++
Sbjct: 431 QNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF 490
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ ++D+ + G + EA+KL R+
Sbjct: 491 VSS--TVVDMYCKCGAITEAQKLHDRI 515
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I GL + + S +D G A + ++ +N+ I T A
Sbjct: 481 IKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQ 540
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
++++ ++PD++++ VL L+TIELG++IH Q + + D ++ + L+ MY
Sbjct: 541 RFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMY 600
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C + D+ +F++ R + WN M+ GYA G
Sbjct: 601 AKCGNMPDSLLMFEK--ARKLDFVSWNAMICGYALHG----------------------- 635
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYG 240
Q EA+ +F RMQ NV P+ +A L AC+ +G ++ G ++ H +Y
Sbjct: 636 --------QGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYK 687
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIA 284
L + ++D+ +S +AL+ +M + W T+++
Sbjct: 688 LVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLS 732
>gi|356570151|ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 262/446 (58%), Gaps = 43/446 (9%)
Query: 14 SRFIDSCSSLGFSDY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
SR SC+ F D A+ IF +P+ +++NT I+A QT P +A+ LY ++ S
Sbjct: 55 SRLFFSCALSPFGDLSLAFRIFHSTPRPNSFMWNTLIRA--QTHAP-HALSLYVAMRRSN 111
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA-SCKCIYDA 130
+ P ++FPF+LKA ++ + +++H + GLD D HVV AL++ Y+ S C+
Sbjct: 112 VLPGKHTFPFLLKACARVRSFTASQQVHVHVIKFGLDFDSHVVDALVRCYSVSGHCV--- 168
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
+AR +F+ EK WTT++ GYAQ
Sbjct: 169 -------------------------------SARQVFDETPEKISSLWTTMVCGYAQNFC 197
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY--IEQYGLNTIVPLN 248
NEA+ LF M E +P + + LSACA+ G +ELGE IH + ++ GL V L
Sbjct: 198 SNEALRLFEDMVGEGFEPGGATLASVLSACARSGCLELGERIHEFMKVKGVGLGEGVILG 257
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARV 307
AL+ MYAK+G+I A ++F+ M ++V+TW MI GL +G +AL +F +M++ V
Sbjct: 258 TALVYMYAKNGEIAMARRLFDEMPERNVVTWNAMICGLGAYGYVDDALGLFEKMKKEGVV 317
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
PN +TF+ +LSACCH GL+++GR F MKS YGIEPKIE YGC++DLLGR G+L EA
Sbjct: 318 VPNGVTFVGVLSACCHAGLIDVGREIFRSMKSVYGIEPKIEHYGCLVDLLGRGGWLLEAV 377
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILG 427
+L++ MP++A+ I G+LLAAS I G+ E+ E ++ ++ LEP N G + LSN+YA G
Sbjct: 378 ELVKGMPWKADVVILGTLLAASRISGNTEVAERVVKDILALEPQNHGVHVALSNMYAEAG 437
Query: 428 RWNESGKIRKVMRDMGVKKMPGCSYI 453
+W E ++RK M++ +KK PG S +
Sbjct: 438 QWQEVLRLRKTMKEERLKKAPGWSLV 463
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD ++H++ + S G A +F + L+ T + Q A+ L+
Sbjct: 146 GLDFDSHVVDALVRCYSVSGHCVSARQVFDETPEKISSLWTTMVCGYAQNFCSNEALRLF 205
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH--CQTVGTGLDSDVHVVAALIQMYA 122
+ P + VL A + +ELG IH + G GL V + AL+ MYA
Sbjct: 206 EDMVGEGFEPGGATLASVLSACARSGCLELGERIHEFMKVKGVGLGEGVILGTALVYMYA 265
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
I AR++FDE+ R NV WN M+ G G +++A LFE M ++ V
Sbjct: 266 KNGEIAMARRLFDEMPER--NVVTWNAMICGLGAYGYVDDALGLFEKMKKEGV------- 316
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGL 241
V P+ + + LSAC G +++G I ++ YG+
Sbjct: 317 -----------------------VVPNGVTFVGVLSACCHAGLIDVGREIFRSMKSVYGI 353
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
+ L+D+ + G + +A+++ + M K+ V+ T++A + G
Sbjct: 354 EPKIEHYGCLVDLLGRGGWLLEAVELVKGMPWKADVVILGTLLAASRISG 403
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 273/484 (56%), Gaps = 14/484 (2%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N L+S ++ G A +F DV +N + + + + A L++ A
Sbjct: 72 NALMSGYV----QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---A 124
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ +R D +++ V+ + +E R + S +VAA IQ + + +
Sbjct: 125 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR----RMMDE 179
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A+++F+ + R NVA WNTM+ GYA+ G L A+A+F+ M +K+ +SW ++A Y+Q
Sbjct: 180 AKELFNMMPCR--NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 237
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
E + LF M + A LS CA + A+E G +H + + G + N
Sbjct: 238 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 297
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+ MY K G + A FE M+ + V++W TMIAG A HG G+EAL++F M KP
Sbjct: 298 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 357
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
++IT + +L+AC H GLVE G YF M +G+ K E Y CMIDLLGRAG L EA L
Sbjct: 358 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 417
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
++ MPFE ++ +WG+LL AS I+ + ELG A + + +LEP N+G Y +LSNIYA G+W
Sbjct: 418 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 477
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++ K+R +M + GVKK+PG S+IEV +VH F AGD HP+ +++Y L ++ +MK A
Sbjct: 478 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 537
Query: 490 EHLQ 493
++
Sbjct: 538 GYVS 541
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 50/321 (15%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
++ Y + +AR +F+ S W+V WN +++GY + G ++ AR LF+ M ++V
Sbjct: 42 GMLAAYVRNGRVEEARGLFN--SRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV 99
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG----------- 224
+SW +++GYA+ EA LF V +V A +S AQ G
Sbjct: 100 VSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDA 155
Query: 225 -----AVELGEWIHNYIEQYGLN------TIVPLN-----NALIDMYAKSGKIGKALQVF 268
AV + YI++ ++ ++P N ++ YA++G + +A VF
Sbjct: 156 MPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVF 215
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M K ++W M+A + G E L +F M R N F +LS C + +E
Sbjct: 216 DTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALE 275
Query: 329 LGRR-YFNIMKSRYGIEPKIEQYGCMID-----LLGRAGYLQEAEKLLRRMPFEANAAIW 382
G + + ++++ YG+ GC + + + G +++A M E + W
Sbjct: 276 CGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVSW 327
Query: 383 GSLLAASNIYGDVELGECALQ 403
+++A +G G+ AL+
Sbjct: 328 NTMIAGYARHG---FGKEALE 345
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 59/293 (20%)
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
+I +A+ + AR FD + + WN M+A Y + G + AR LF TE +VI
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEK--DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 69
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
SW L++GY Q + +EA LF RM +V W
Sbjct: 70 SWNALMSGYVQWGKMSEARELFDRMPGRDVV----------------------SW----- 102
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
N ++ YA+ G + +A ++F+ + V TWT +++G A +G+ EA
Sbjct: 103 ------------NIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEAR 150
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+F M + N +++ A+++A +++ + FN+M R + + M+
Sbjct: 151 RVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-----NVASWNTMLTG 201
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG--------DVELGECA 401
+AG L+EA+ + MP + +A W ++LAA + G +E+G C
Sbjct: 202 YAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 253
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 282/477 (59%), Gaps = 14/477 (2%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C F YA IF + + ++++YN+ I+ + P A++ Y + + Y+F
Sbjct: 54 CDRDSFFSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTF 113
Query: 80 PFVLKA--VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD---ARKVF 134
P ++KA +V +G +H + G ++D VV+AL++ Y+ ++D AR +F
Sbjct: 114 PPLIKACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYS----LFDLKVARVLF 169
Query: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194
D+ S + +V VW MV GY KVGD+ +AR LF+ M E+NVISW+ ++A Y+++ E
Sbjct: 170 DKSSGK--DVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREV 227
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ LFR+MQ +N+ P++ + + L+ACA LGA+ G W+H+Y ++YGL++ L AL+DM
Sbjct: 228 LCLFRQMQKKNIVPNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDM 287
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
Y+K G I AL+VFE + NK W MI+G A+ G ++L++F +M + + E TF
Sbjct: 288 YSKCGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATF 347
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL-RRM 373
++IL+AC H +VE G +F+ M Y ++P+ E Y C++DL+ RAG +++AEK + +M
Sbjct: 348 VSILAACTHAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKM 407
Query: 374 PFEAN--AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
+N A +WG++L+A Y ++E+G+ L L + G + NI++ GR
Sbjct: 408 GGFSNVDANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMA 467
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+ ++RK + KK+PGCS I V V EF+AGD SHP + ++L ++ +K+
Sbjct: 468 AKEVRKKFSEARSKKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKW 524
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
+D +G + A +F + +V ++ + A + + + L+ ++Q + P++
Sbjct: 184 VDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPND 243
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
VL A L I G +H GLDS+ + AL+ MY+ C I A +VF+
Sbjct: 244 SVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEG 303
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVISWTTLIAGYAQMDQPN 192
+S + + WN M++G+A G++ + LF+ M T+ ++ +++A
Sbjct: 304 ISNK--DAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVE 361
Query: 193 EAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGE 230
+ F +M V V+P + A+ G VE E
Sbjct: 362 RGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAE 400
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 265/472 (56%), Gaps = 34/472 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D S G + A +F + + + I A + +A+ L++++Q+ +RPD
Sbjct: 337 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPD 396
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
Y+ ++ A S+++ GR++H + G+ S++ V ALI MY
Sbjct: 397 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMY-------------- 442
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
AK G + AR +F + K+++SW T+I GY+Q PNEA+
Sbjct: 443 -------------------AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEAL 483
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF MQ + KPD+I M L ACA L A++ G IH +I + G + + + AL+DMY
Sbjct: 484 ELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMY 542
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + A +F+ + K +I+WT MIAG +HG G EA+ F+ M A ++P+E +F
Sbjct: 543 AKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFS 602
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
AIL+AC H GL+ G ++FN M++ G+EPK+E Y C++DLL R G L +A K + MP
Sbjct: 603 AILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPI 662
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ + IWG LL+ I+ DV+L E +H+ +LEP N+ Y +L+N+YA +W E K+
Sbjct: 663 KPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKL 722
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
RK M+ G K+ PGCS+IEV + + FVAG++ HP ++ +L K+ QM+
Sbjct: 723 RKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQ 774
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 212/483 (43%), Gaps = 80/483 (16%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
IF V+L+N + + N +V L+ K+Q + + Y+F VLK L
Sbjct: 151 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 210
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
++ + +H + G S+ VV +LI Y + A +FDELS +V WN+M+
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP--DVVSWNSMI 268
Query: 152 AG-----------------------------------YAKVGDLNNARALFEL-----MT 171
G A +G+L+ RAL +
Sbjct: 269 NGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFS 328
Query: 172 EKNVISWTTL------------------------------IAGYAQMDQPNEAITLFRRM 201
E+ V S T L IA Y + ++AI LF M
Sbjct: 329 EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEM 388
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
Q + V+PD + + + ACA +++ G +H+Y+ + G+ + +P+ NALI+MYAK G +
Sbjct: 389 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 448
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A VF + K +++W TMI G + + L EAL++F M++ + KP++IT +L AC
Sbjct: 449 EEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPAC 507
Query: 322 CHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
+ ++ GR + +I+ R G + ++D+ + G L A+ L +P + +
Sbjct: 508 AGLAALDKGREIHGHIL--RRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLI 564
Query: 381 IWGSLLAASNI--YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
W ++A + +G+ + + +EP S AIL N + G NE K
Sbjct: 565 SWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAIL-NACSHSGLLNEGWKFFNS 623
Query: 439 MRD 441
MR+
Sbjct: 624 MRN 626
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 168/370 (45%), Gaps = 47/370 (12%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C S F++ +S+ ++ N I C+ + NA+ L K ++ L ++Y
Sbjct: 48 CVSPSFTNTTHSVTQNQ--------NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCS 99
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
VL+ + ++E G+ +H + G+ D + A L+ MY +C + RK+FD++
Sbjct: 100 --VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMN 157
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
V +WN +++ YAK+G+ E+++LF+
Sbjct: 158 D--KVFLWNLLMSEYAKIGNF-------------------------------RESVSLFK 184
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+MQ V + L A LG V+ + +H Y+ + G + + N+LI Y K G
Sbjct: 185 KMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFG 244
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A +F+ + V++W +MI G ++G L++F +M V+ + T +++L
Sbjct: 245 GVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLV 304
Query: 320 ACCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
AC ++G + LGR +K+ + E ++D+ + G L A ++ +M +
Sbjct: 305 ACANIGNLSLGRALHGFGVKACFSEEVVFSNT--LLDMYSKCGNLNGATEVFVKMG-DTT 361
Query: 379 AAIWGSLLAA 388
W S++AA
Sbjct: 362 IVSWTSIIAA 371
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 253/440 (57%), Gaps = 4/440 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNP-LNAVILYNKIQASALRPDNYSFPFVLKAVV 87
A +F + D+Y+Y++ + A+ + +P L IL + A AL PD++ V
Sbjct: 57 ALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFA 116
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+L + LGR++H V + + D V ++L+ MY C D RKVFD +S + N VW
Sbjct: 117 RLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK--NSVVW 174
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+V+GYA G A LF M +N+ +WT LI+G + A+ LF M+ + V+
Sbjct: 175 TALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVR 234
Query: 208 PDEIAMLA-ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D+ +L+ + A L A LG +H + G + + + NALIDMY+K I A +
Sbjct: 235 IDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSARE 294
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VFE + + VI+WTTM+ G A HG EAL ++ RM A KPNE+TF+ ++ AC H GL
Sbjct: 295 VFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGL 354
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ GR+ F MK+ YGI P+++ Y C +DLL R+G+L EAE+L+ MP+E + A WG+LL
Sbjct: 355 VQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALL 414
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+A Y D E+ L++L P +S Y +LSN+YA+ G+W+ K+RK M + ++K
Sbjct: 415 SACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRK 474
Query: 447 MPGCSYIEVSKRVHEFVAGD 466
PG S+IE + F AG+
Sbjct: 475 EPGYSWIEAGREFRLFHAGE 494
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 34/208 (16%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + + GL AAL+ YA + + DA +FDE R
Sbjct: 23 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRR--------------- 67
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAML 214
++ +++L+ + P A+ + R M + + PD +
Sbjct: 68 ------------------DIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVIS 109
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
+ S A+L + LG +H + N + ++L+DMY K G +VF++M K
Sbjct: 110 SVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK 169
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRM 302
+ + WT +++G A +G EAL +F M
Sbjct: 170 NSVVWTALVSGYASNGRSEEALQLFRSM 197
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 274/492 (55%), Gaps = 66/492 (13%)
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
P +A+ ++ + R D++++ F++KA+ + R +H V G D V A
Sbjct: 421 PRDALAAFSAMP----RRDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNA 475
Query: 117 LIQMYASCKCIYDARKV-------------------------------FDELSLR---VW 142
LI Y+ DARKV FDE+ + W
Sbjct: 476 LIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSW 535
Query: 143 N--------------------------VAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
N V W+TMV+GY K GDL AR +F+ M KN++
Sbjct: 536 NTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLV 595
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+WT +++ AQ +EA LF +M+ +V+ D A+++ L+ACA+ G++ LG+ IH Y+
Sbjct: 596 TWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYV 655
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREA 295
+ L + NALIDM+ K G + +A VF+ K ++W ++I G A+HG G +A
Sbjct: 656 RKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKA 715
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L++F++M++ P+ +T I +LSAC H+G V+ GRR+F+ M+ YGI P+IE YGCMID
Sbjct: 716 LELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMID 775
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGR G ++EA L++ MP+E N IWGSLL+A ++ +VE E A+ L KL+P N+GN
Sbjct: 776 LLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGN 835
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
YA+LSNIYA G+W++ K R M+ G +K G S++E+++ HEF GD H D D++
Sbjct: 836 YAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQI 895
Query: 476 YQILCKINGQMK 487
+++ +++ +K
Sbjct: 896 SEMVDRLSSHVK 907
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 34/265 (12%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A IF ++ + + A Q A L+ +++ +++ D + +L A
Sbjct: 580 EMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAAC 639
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ ++ LG+ IH L HV ALI M+ C C+ A VFD +++ +V+
Sbjct: 640 AESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVS- 698
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN+++ G+A G ++A+ LF +M+ +
Sbjct: 699 WNSIIGGFAMHG-------------------------------HGDKALELFAQMKQQGF 727
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKAL 265
PD + M+ LSAC +G V+ G + +E+ YG+ + +ID+ + G I +A+
Sbjct: 728 NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAV 787
Query: 266 QVFENMK-NKSVITWTTMIAGLALH 289
+ ++M + + W ++++ LH
Sbjct: 788 DLIKSMPWEPNEVIWGSLLSACRLH 812
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 290/531 (54%), Gaps = 45/531 (8%)
Query: 3 VRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
+R L+ L I C+ +G A IF+ S +V YNT I C+ N A
Sbjct: 173 LRVLELGRQLHGVVIKRCADMG---SALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKE 229
Query: 63 LYNKIQ----------------------------------ASALRPDNYSFPFVLKAVVK 88
L+++++ + D+++ VL A
Sbjct: 230 LFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACAD 289
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++++ G+E+H Q V GL + V AL++MY+ C+ + A+ FD ++ R + A WN
Sbjct: 290 MASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTER--DTATWN 347
Query: 149 TMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+++GYA L N + L + M E NV +W +I+G+ + A+ LF MQ
Sbjct: 348 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 407
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+++PD + L ACA+L + G+ +H + + G V + AL+DMYAK G I A
Sbjct: 408 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHA 467
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+QV+ + N ++++ M+ A+HG G E + +F M +P+ +TF+++LS+C H
Sbjct: 468 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA 527
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G VE G +F++M + Y + P ++ Y C++DLL RAG L EA +L++++P + ++ +WG+
Sbjct: 528 GAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGA 586
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL I+G+VELGE A + LI+LEP+N+GNY +L+N+YA GRW++ + R++++D G+
Sbjct: 587 LLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGM 646
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA-EHLQN 494
K PGCS+IE + +H F++ D SH + +Y L +N M+ EH+ N
Sbjct: 647 HKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMRTGLEHVYN 697
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 208/475 (43%), Gaps = 31/475 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + ++ + G D A +F + ++Y + + A+ L+
Sbjct: 89 GFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLF 148
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+Q + + + FP VLK L +ELGR++H + C
Sbjct: 149 EKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVI------------------KRC 190
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLI 182
+ A K+F S++ NV +NTM+ GY + G++ A+ LF+ M K+ ISW ++I
Sbjct: 191 ADMGSALKIFSGFSVK--NVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMI 248
Query: 183 AGYAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+GYA +EA+++FR + + E ++ D + + L+ACA + ++ G+ +H GL
Sbjct: 249 SGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGL 308
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + AL++MY+K + A F+ + + TW +I+G A ++ +
Sbjct: 309 HWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQK 368
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ +PN T+ I+S G EL R F M++ + P I G ++ R
Sbjct: 369 MKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS-SLRPDIYTVGIILPACARLA 427
Query: 362 YLQEAEKLLR---RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
+ +++ R +E + I +L+ ++Y + A+Q ++ N +
Sbjct: 428 TIARGKQVHAHSIRQGYELDVHIGAALV---DMYAKCGSIKHAMQVYNRISNPNLVSQNA 484
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFD 473
+ YA+ G +E + + M G + +++ V A +T H FD
Sbjct: 485 MLTAYAMHGHGDEGIALFRNMLGNGFRP-DHVTFLSVLSSCVHAGAVETGHEFFD 538
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D + L +C L LG+ +H + + G + + L+ MY + G + A VF
Sbjct: 61 DSSTYASLLESCRTL---NLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVF 117
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
M +++ +WT +++ HG EAL +F +++ + F +L C + ++E
Sbjct: 118 VKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLE 177
Query: 329 LGRRYFNIMKSR-----------YGIEPK-IEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
LGR+ ++ R G K + Y MI G +++A++L +M
Sbjct: 178 LGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELV 237
Query: 377 ANAAI-WGSLLA--ASNIYGDVEL 397
I W S+++ A N+ D L
Sbjct: 238 GKDTISWNSMISGYADNLLFDEAL 261
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 43/97 (44%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I +G + + H+ + +D + G +A ++ S P++ N + A + +
Sbjct: 440 IRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGI 499
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
L+ + + RPD+ +F VL + V +E G E
Sbjct: 500 ALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEF 536
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 259/494 (52%), Gaps = 33/494 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI D ++++ +D + G D A +F + D+ L+N I +
Sbjct: 331 MIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGES 390
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ + + VLK+ L I ++H G SD HVV LI
Sbjct: 391 LSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDS 450
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C C+ A KV FE + N+I++T+
Sbjct: 451 YWKCNCLRYANKV---------------------------------FEEHSSDNIIAFTS 477
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I +Q D +AI LF M + ++PD + + L+ACA L A E G+ +H ++ +
Sbjct: 478 MITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRK 537
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
T V NAL+ YAK G I A F + +K V++W+ MI GLA HG G+ ALD+F
Sbjct: 538 FMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFR 597
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
RM R+ PN IT ++L AC H GLV+ + YF+ MK +GI+ E Y CMIDLLGRA
Sbjct: 598 RMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRA 657
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L +A +L+ MPFEANAA+WG+LLAAS ++ D ELG+ A + L LEP SG + +L+
Sbjct: 658 GKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLA 717
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N YA G W+E K+RK+M+D VKK P S++E+ RVH F+ GD SHP +Y L
Sbjct: 718 NTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLE 777
Query: 481 KINGQMKFAEHLQN 494
++ M A ++ N
Sbjct: 778 ELGDLMSKAGYVPN 791
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 41/310 (13%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
NHLLS F C G A +F P +++ + A P A+ + ++A
Sbjct: 41 NHLLS-FYSKCRLPG---SARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRA 96
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+R + ++ P VLK LG ++H V TGL D+ V AL+ M
Sbjct: 97 RGVRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGLSGDIFVANALVAM--------- 144
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQM 188
Y G ++ AR +F E ++N +SW +++ + +
Sbjct: 145 ------------------------YGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
D+ ++A+ LF M V+P+E ++AC +E G +H + + G + V
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
NAL+DMY+K G I A VF + V++W I+G LHG + AL++ +M+ + +
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 309 PNEITFIAIL 318
PN T +IL
Sbjct: 301 PNVFTLSSIL 310
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 36/301 (11%)
Query: 23 LGFSDYAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
GF D A +F ++ + +N + A + D +AV L+ ++ S +RP+ + F
Sbjct: 148 FGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSC 207
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
V+ A +E GR++H V TG D DV AL+ MY+
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYS------------------- 248
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
K+GD++ A +F + + +V+SW I+G A+ L +M
Sbjct: 249 --------------KLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQM 294
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELG--EWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+ + P+ + + L ACA GA IH ++ + ++ + AL+DMYAK G
Sbjct: 295 KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYG 354
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A +VFE + K ++ W +I+G + G E+L +F RM + N T A+L
Sbjct: 355 LLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLK 414
Query: 320 A 320
+
Sbjct: 415 S 415
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 257/426 (60%), Gaps = 9/426 (2%)
Query: 33 FTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA-LRPDNYSFPFVLKAVVKLST 91
F + V +N + Q P + L+N + + ++PD ++ V+ + L
Sbjct: 223 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGD 282
Query: 92 IELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV-WNT 149
L I + T G + V AL+ M+A C + A K+F++L + + +V WN
Sbjct: 283 PCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 342
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKP 208
M++ YA+VGDL +AR LF+ M +++ +SW ++IAGY Q + +AI LF M E+ KP
Sbjct: 343 MISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKP 402
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
DE+ M++ SAC LG + LG W + +++ + + + N+LI MY++ G + A+ +F
Sbjct: 403 DEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIF 462
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M + ++++ T+I+G A HG G E++++ +M+ ++P+ IT+IAIL+AC H GL+
Sbjct: 463 QEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLG 522
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+R F +K P ++ Y CMID+LGRAG L+EA KL++ MP E +A I+GSLL A
Sbjct: 523 EGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNA 577
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
++I+ VELGE A L K+EPHNSGNY +LSNIYA GRW + K+R MR GVKK
Sbjct: 578 TSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTT 637
Query: 449 GCSYIE 454
G S++E
Sbjct: 638 GLSWLE 643
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 198/447 (44%), Gaps = 81/447 (18%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL-GFSDYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNP 57
++ L NH + + C+ L S Y IF + PDV ++ +K Q
Sbjct: 26 LVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVRVFTFMLKYYSQIGVRAQ 85
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+ + + ++ ++P+ + ++K+ S + L + +G D D +V +
Sbjct: 86 VPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLA-----HVLKSGYDRDHYVRNGI 140
Query: 118 IQMYASCKCIYDARKVFDELSLRV---WNVAV---------------------------- 146
+ +YA I ARK+FDE+ R WNV +
Sbjct: 141 LGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNV 200
Query: 147 --WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QV 203
W TM+ G+AK G+L AR F+ M E++V+SW +++GYAQ P E I LF M
Sbjct: 201 ITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 260
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWI------------------------------- 232
NV+PDE + +S+C+ LG L E I
Sbjct: 261 GNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLE 320
Query: 233 --HNYIEQYGL---NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
H EQ G+ + VP NA+I YA+ G + A +F+ M + ++W +MIAG
Sbjct: 321 AAHKIFEQLGVYKYRSSVPW-NAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYT 379
Query: 288 LHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
+G +A+ +F M + KP+E+T +++ SAC H+G + LG +I+K + I+
Sbjct: 380 QNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENH-IQIS 438
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRM 373
I Y +I + R G +Q+A + + M
Sbjct: 439 ISVYNSLISMYSRCGSMQDAVLIFQEM 465
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 252/445 (56%), Gaps = 34/445 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA+SI P+ + +N+ I+A + P A+ ++ ++ + PD YSF FVLKA
Sbjct: 92 YAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA 151
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
E GR+IH + +GL +DV V L+ +Y ARKV D + +R + W
Sbjct: 152 AFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR--DAVSW 209
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV- 206
N++++ Y + G ++ ARALF+ M E+NV SW +I+GYA EA +F M V +V
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV 269
Query: 207 -------------------------------KPDEIAMLAALSACAQLGAVELGEWIHNY 235
KPD +++ LSACA LG++ GEW+H Y
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVY 329
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I+++G+ L AL+DMY+K GKI KAL+VF + V TW ++I+ L++HGLG++A
Sbjct: 330 IDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDA 389
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L++FS M KPN ITFI +LSAC HVG+++ R+ F +M S Y +EP IE YGCM+D
Sbjct: 390 LEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVD 449
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGR G ++EAE+L+ +P + + + SLL A +G +E E L++L +S
Sbjct: 450 LLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSG 509
Query: 416 YAILSNIYAILGRWNESGKIRKVMR 440
YA +SN+YA GRW + R+ MR
Sbjct: 510 YAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
T ++I A AL +F M V P++ +F +L AC E GR+ +
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G+ + ++++ GR+GY + A K+L RMP +A W SLL+A Y +
Sbjct: 166 F-IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA---YLEKG 220
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM--------- 447
L + A ++E N ++ + + YA G E+ ++V M V+ +
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEA---KEVFDSMPVRDVVSWNAMVTA 277
Query: 448 ---PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
GC Y EV + ++ + T PD L +L
Sbjct: 278 YAHVGC-YNEVLEVFNKMLDDSTEKPDGFTLVSVL 311
>gi|356507694|ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 535
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 268/486 (55%), Gaps = 44/486 (9%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
F + S +G +A+S+F S + ++ NT I+A + PL A+ +YN + + + D
Sbjct: 45 FFSALSPMGNLSHAHSLFLQTSMHNSFICNTMIRAFANSSYPLQALYIYNHMHTTNVVSD 104
Query: 76 NYSFPFVLKAVVK-------------LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++++ FVLKA + I G E+HC + GLD D + +L+ MY+
Sbjct: 105 HFTYNFVLKACSRAHKFAQEFVKCDEFIIISKGGEVHCTVLKLGLDQDPSIQNSLLCMYS 164
Query: 123 SCKCIYDARKVFDELSLRV---WNVAV--------------------------WNTMVAG 153
C ++ A+ +FDE+S R WN+ + WNT++
Sbjct: 165 QCGLVHVAQHLFDEISNRSLVSWNIMISAYDRVNDSKSADYLLESMPHKNVVSWNTVIGR 224
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAM 213
Y ++GD+ AR +F++M +++ +SW +LIAG + A+ LF MQ V+P E+ +
Sbjct: 225 YIRLGDIEGARRVFQIMPQRDAVSWNSLIAGCVSVKDYEGAMGLFSEMQNAEVRPTEVTL 284
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
++ L ACA+ GA+E+G IH ++ G L NAL++MY+K GK+ A +VF M+
Sbjct: 285 ISVLGACAETGALEMGSKIHESLKACGHKIEGYLGNALLNMYSKCGKLNSAWEVFNGMRI 344
Query: 274 KSVITWTTMIAGLALHGLGREALDMFSRMERA--RVKPNEITFIAILSACCHVGLVELGR 331
K++ W MI GLA+HG EAL +FS ME V+PN +TF+ +L AC H GLV+ R
Sbjct: 345 KTLSCWNAMIVGLAVHGYCEEALQLFSEMESGLDTVRPNRVTFLGVLIACSHKGLVDKAR 404
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
F+ M +Y I P I+ YGC++DLL R G L+EA ++++ P + +A +W +LL A
Sbjct: 405 WNFDHMAKQYKILPDIKHYGCIVDLLSRFGLLEEAHQMIKTAPLQNSAILWRTLLGACRT 464
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
G+VEL + + Q L KL G+Y +LSNIYA RW+E ++R M + V K S
Sbjct: 465 QGNVELAKVSFQQLAKLGRLTDGDYVLLSNIYAEAERWDEVERVRSEMIGLHVPKQVAYS 524
Query: 452 YIEVSK 457
I++++
Sbjct: 525 QIDMTE 530
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/490 (36%), Positives = 277/490 (56%), Gaps = 41/490 (8%)
Query: 2 IVRGLDQNNHL-LSRFIDSCSSLGFSDYAYS--IFTHKSKPDVYLYNTTIKALCQTDNPL 58
I++ QN+ L L + SC + +Y+ +F+ PD YNT I++ + P
Sbjct: 11 IIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSRF-FPS 69
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
+++ + ++++ + DN++FPFVLKA +L ++ +H V GL SD+ V ALI
Sbjct: 70 HSLSYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVKYGLGSDIFVQNALI 126
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+Y C + A KVFDE+S R + W+T++A + LNN
Sbjct: 127 CVYGYCGSLEMAVKVFDEMSER--DSVSWSTVIASF-----LNN---------------- 163
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
GYA +EA+ LF +MQ+E+ V PDE+ ML+ +SA + LG +ELG W+ +I
Sbjct: 164 -----GYA-----SEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIG 213
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ G V L ALIDM+++ G I +++ VFE M ++V+TWT +I GL +HG EAL
Sbjct: 214 RLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALA 273
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF M ++ V+P+ +TF +L AC H GLV+ G F ++ YG++P ++ YGCM+D+L
Sbjct: 274 MFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDIL 333
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L EA + RMP + N+ IW +LL A + ++ L E + K+ +G+
Sbjct: 334 GRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLV 393
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
+LSN+Y GRW E IR MR+ + K PGCS I V + +HEFV+GD SHP + + +
Sbjct: 394 LLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITK 453
Query: 478 ILCKINGQMK 487
L I G ++
Sbjct: 454 FLSSIIGDLR 463
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 250/463 (53%), Gaps = 33/463 (7%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F D +N I A Q N + L+ + S + PD +++ VLKA
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 492
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ G EIH + + + L D V ALI MY+ C
Sbjct: 493 LNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKC--------------------------- 525
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G + A L + + E+ V+SW +I+G++ Q EA F +M V PD
Sbjct: 526 ------GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 579
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
L CA L VELG+ IH I + L + +++ L+DMY+K G + +FE
Sbjct: 580 TYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKA 639
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
N+ +TW M+ G A HGLG EAL +F M+ VKPN TF+A+L AC H+GLVE G
Sbjct: 640 PNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL 699
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
YF+ M S YG++P++E Y C++D++GR+G + +A +L+ MPFEA+A IW +LL+ I
Sbjct: 700 HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKI 759
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+G+VE+ E A +++LEP +S Y +LSNIYA G WNE K+RK+MR G+KK PGCS
Sbjct: 760 HGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 819
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
+IE+ VH F+ GD +HP +Y+ L + +MK+ ++ +
Sbjct: 820 WIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 862
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 161/325 (49%), Gaps = 9/325 (2%)
Query: 53 QTDNPLNAVIL--YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD 110
Q+ +P + + ++ QA+ + +S F + + G++ H + + T
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIF--QECSDRKALCPGKQAHARMILTEFKPT 76
Query: 111 VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
V V LIQMY C + A KVFD + R + WN M+ GYA GD+ A+ LF+ M
Sbjct: 77 VFVTNCLIQMYIKCSDLEFAFKVFDGMPQR--DTVSWNAMLFGYAGRGDIGVAQKLFDAM 134
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
E++V+SW +LI+GY + I +F +M D L +C+ L G
Sbjct: 135 PERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGI 194
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
IH + G + V +AL+DMYAK K+ ++Q F +M K+ ++W+ +IAG +
Sbjct: 195 QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQND 254
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQ 349
R L++F M++A V ++ TF ++ +C + + LG + + + +K+ +G + I
Sbjct: 255 DLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGT 314
Query: 350 YGCMIDLLGRAGYLQEAEKLLRRMP 374
+D+ + L +A+KL +P
Sbjct: 315 --ATLDMYMKCNNLSDAQKLFNSLP 337
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 181/396 (45%), Gaps = 39/396 (9%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D + F + + ++ I Q D+ + L+ ++Q + + +F V ++
Sbjct: 226 DCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSC 285
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
LS + LG ++H + T +DV + A + MY C
Sbjct: 286 AGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCN--------------------- 324
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
+L++A+ LF + N+ S+ +I GYA+ D+ EA+ +FR +Q +
Sbjct: 325 ------------NLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
DE+++ A ACA + G +H + + + + NA++DMY K G + +A
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 432
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VFE M ++ ++W +IA +G + L +F M ++ ++P+E T+ ++L AC
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 492
Query: 327 VELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ G N I+KSR G++ + +ID+ + G +++AEKL R+ E W ++
Sbjct: 493 LNCGMEIHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAI 549
Query: 386 LAASNIYGDVELGECALQHLIKL--EPHNSGNYAIL 419
++ ++ E + ++++ +P N IL
Sbjct: 550 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 585
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 183/399 (45%), Gaps = 49/399 (12%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F ++ YN I ++D + A+ ++ +Q S L D S +A
Sbjct: 329 AQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAV 388
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ G ++H ++ + S++ V A++ MY C + +A VF+E+ R + WN
Sbjct: 389 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR--DAVSWN 446
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
++A + + G+ + ++LF M ++P
Sbjct: 447 AIIAAHEQNGN-------------------------------EEKTLSLFVWMLQSGMEP 475
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
DE + L ACA A+ G IHN I + GL++ V + ALIDMY+K G + KA +
Sbjct: 476 DEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAEK 533
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+ + + ++V++W +I+G +L EA FS+M V P+ T+ IL C ++
Sbjct: 534 LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT 593
Query: 327 VELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
VELG++ + I+K + I ++D+ + G +Q+ + + + P + W ++
Sbjct: 594 VELGKQIHAQIIKKELQSDAYISS--TLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNAM 650
Query: 386 LAASNIYGDVELGECALQ-----HLIKLEPHNSGNYAIL 419
+ +G LGE AL+ L ++P+++ A+L
Sbjct: 651 VCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVL 686
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 35/277 (12%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID S G + A + ++ V +N I A ++K+ + PD
Sbjct: 518 LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 577
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
N+++ +L L T+ELG++IH Q + L SD ++ + L+ MY+ C + D + +F+
Sbjct: 578 NFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFE 637
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ R + WN MV GYA+ G EA+
Sbjct: 638 KAPNR--DFVTWNAMVCGYAQHG-------------------------------LGEEAL 664
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDM 254
+F MQ+ENVKP+ LA L AC +G VE G + H+ + YGL+ + + ++D+
Sbjct: 665 KIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDI 724
Query: 255 YAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
+SG++ KAL++ E M ++ + W T+++ +HG
Sbjct: 725 MGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHG 761
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 157/369 (42%), Gaps = 37/369 (10%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + DV +N+ I + + ++ ++ D +F VLK+
Sbjct: 127 AQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSS 186
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L G +IH V G D DV +AL+ MYA CK
Sbjct: 187 LEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK----------------------- 223
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
L+ + F M EKN +SW+ +IAG Q D + LF+ MQ V
Sbjct: 224 ----------KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGV 273
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + +CA L A+ LG +H + + T V + A +DMY K + A ++F
Sbjct: 274 SQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLF 333
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV-GLV 327
++ N ++ ++ +I G A G EAL MF ++++ + +E++ AC + G +
Sbjct: 334 NSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDL 393
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E + + MKS + I ++D+ G+ G L EA + M +A W +++A
Sbjct: 394 EGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIA 450
Query: 388 ASNIYGDVE 396
A G+ E
Sbjct: 451 AHEQNGNEE 459
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 47/242 (19%)
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
I+ F Q K + + C+ A+ G+ H + V + N LI M
Sbjct: 29 ISPFSSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86
Query: 255 YAKS-------------------------------GKIGKALQVFENMKNKSVITWTTMI 283
Y K G IG A ++F+ M + V++W ++I
Sbjct: 87 YIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLI 146
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC----HVGLVELGRRYFNIMKS 339
+G +G R+ +D+F +M R + TF +L +C H G +++ + +
Sbjct: 147 SGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI-----HGLAV 201
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA----SNIYGDV 395
+ G + + ++D+ + L + + MP E N W +++A ++ G +
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 396 EL 397
EL
Sbjct: 261 EL 262
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 253/440 (57%), Gaps = 4/440 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNP-LNAVILYNKIQASALRPDNYSFPFVLKAVV 87
A +F + D+Y+Y++ + A+ + +P L IL + A AL PD++ V
Sbjct: 139 ALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFA 198
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+L + LGR++H V + + D V ++L+ MY C D RKVFD +S + N VW
Sbjct: 199 RLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK--NSVVW 256
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+V+GYA G A LF M +N+ +WT LI+G + A+ LF M+ + V+
Sbjct: 257 TALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVR 316
Query: 208 PDEIAMLA-ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D+ +L+ + A L A LG +H + G + + + NALIDMY+K I A +
Sbjct: 317 IDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSARE 376
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VFE + + VI+WTTM+ G A HG EAL ++ RM A KPNE+TF+ ++ AC H GL
Sbjct: 377 VFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGL 436
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ GR+ F MK+ YGI P+++ Y C +DLL R+G+L EAE+L+ MP+E + A WG+LL
Sbjct: 437 VQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALL 496
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+A Y D E+ L++L P +S Y +LSN+YA+ G+W+ K+RK M + ++K
Sbjct: 497 SACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRK 556
Query: 447 MPGCSYIEVSKRVHEFVAGD 466
PG S+IE + F AG+
Sbjct: 557 EPGYSWIEAGREFRLFHAGE 576
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 38/210 (18%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + + GL AAL+ YA + + DA +FDE R
Sbjct: 105 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRR--------------- 149
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAML 214
++ +++L+ + P A+ + R M + + PD +
Sbjct: 150 ------------------DIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVIS 191
Query: 215 AALSACAQLGAVELGEWIHNY--IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ S A+L + LG +H + + Y + +V ++L+DMY K G +VF++M
Sbjct: 192 SVASVFARLRSRRLGRQLHAHFVVSPYNGDDVV--KSSLVDMYCKCGSPDDGRKVFDSMS 249
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRM 302
K+ + WT +++G A +G EAL +F M
Sbjct: 250 AKNSVVWTALVSGYASNGRSEEALQLFRSM 279
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 266/481 (55%), Gaps = 42/481 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHK------SKPDVYLYNTTIKALCQTDNPL 58
G+D N + + ID S G A SIF + P +N I ++
Sbjct: 302 GVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAP----WNAMISGYLRSGFNE 357
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ L+ K+ + + D+Y++ V A+ L + LG+++H + + +GL+
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLE---------- 407
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
V V++ N + YAK G L + R +F M ++++ISW
Sbjct: 408 ----------------------VNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISW 445
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T+L+ Y+Q + ++AI +F M+ E + P++ + L +CA L +E G+ +H I +
Sbjct: 446 TSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICK 505
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL+ + +AL+DMYAK G +G A +VF + N ++WT +IAG A HG+ +AL +
Sbjct: 506 VGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQL 565
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F RM + V+PN +TF+ +L AC H GLVE G +YF +MK YG+ P++E Y C++DLL
Sbjct: 566 FRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLS 625
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G+L +A + + RMP E N +W +LL A ++G+VELGE A Q ++ + NS Y +
Sbjct: 626 RVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVL 685
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSN Y G + + +R VM++ GVKK PGCS+I V+ +H+F AGD HP+ D++Y
Sbjct: 686 LSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAK 745
Query: 479 L 479
L
Sbjct: 746 L 746
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 210/477 (44%), Gaps = 83/477 (17%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
NH+ + CS + D A +F S+ + + + I L + L+ + ++Q+
Sbjct: 109 NHVAHAY-SKCSDI---DAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQS 164
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ PD +++ +L+ + L +IELG +H Q V G S V AL+ MYA + I D
Sbjct: 165 QGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIED 224
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAK--------------------------------- 156
+ KVF+ ++ NV WN M+ G+
Sbjct: 225 SYKVFNTMT--EVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAI 282
Query: 157 --VGDLNNARAL----FELMTEKNVISWTTLI---------------------------- 182
+ D+N A+ + EL + N + T LI
Sbjct: 283 GMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAP 342
Query: 183 -----AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
+GY + +A+ LF +M ++ D + +A A L + LG+ +H
Sbjct: 343 WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAI 402
Query: 238 QYGLNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ GL V ++NA+ + YAK G + +VF M+++ +I+WT+++ + +A+
Sbjct: 403 KSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAI 462
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FS M + PN+ TF ++L +C ++ L+E G++ I+ + G++ ++D+
Sbjct: 463 EIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGII-CKVGLDMDKCIESALVDM 521
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL--EPH 411
+ G L +A+K+ R+ A+ W +++A +G V+ + +++L EP+
Sbjct: 522 YAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ + N + Y+K D++ A LF+ M+++N SWT LIAG A+ + F MQ
Sbjct: 104 SLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQ 163
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ + PD+ A L C L ++ELG +H I G + ++ AL++MYAK +I
Sbjct: 164 SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIE 223
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+ +VF M +V++W MI G + L +A D+F RM V P+ TFI + A
Sbjct: 224 DSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA-- 281
Query: 323 HVGLVELGRRYFNIMK--SRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLR----- 371
+G++ R N K S Y +E ++ +ID+ + G LQEA +
Sbjct: 282 -IGML----RDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFIT 336
Query: 372 -RMPFEANAAIWGSLLAASN 390
R NA I G L + N
Sbjct: 337 CRFNAPWNAMISGYLRSGFN 356
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 248/463 (53%), Gaps = 33/463 (7%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A S+F DV + + A + + L+ ++Q + PD ++ L
Sbjct: 589 EQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC 648
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ +T+ LG+ IH GL++D+ V AL+ MY++C
Sbjct: 649 LASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNC---------------------- 686
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
GD A + FE M ++++SW + A YAQ EA+ LFR+MQ+E V
Sbjct: 687 -----------GDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGV 735
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KPD++ L+ V G+ H + GL++ V + L+ +YAK GK+ +A+
Sbjct: 736 KPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMS 795
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F + +V+ +I LA HG EA+ MF +M++ V+P+ T ++I+SAC H G+
Sbjct: 796 LFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGM 855
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G F MK +GI P +E Y C +DLLGRAG L+ AE+++R+MPFE N +W SLL
Sbjct: 856 VEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+ GD ELGE Q +++L+PHNS + +LSNIY G+W ++ RK M D VK
Sbjct: 916 GTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKN 975
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
PG S+ E+ K+VHEFVAGD SHP D +Y +L K+ M+ A
Sbjct: 976 APGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRA 1018
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 156/360 (43%), Gaps = 55/360 (15%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C S+ ++ + S+ V +N + A Q D A ++ + PD SF
Sbjct: 486 CGSISEAELVFKEMPLPSRSLV-TWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSF 544
Query: 80 PFVLKA--------VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
VL + V+++ +E G C + ALI M+ C+ + AR
Sbjct: 545 TSVLSSCYCSQEAQVLRMCILESGYRSAC------------LETALISMHGRCRELEQAR 592
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VF+E M +V+SWT +++ A+
Sbjct: 593 SVFNE---------------------------------MDHGDVVSWTAMVSATAENRDF 619
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
E LFRRMQ+E V PD+ + L C + LG+ IH + + GL + + NAL
Sbjct: 620 KEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENAL 679
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
++MY+ G +AL FE MK + +++W M A A GL +EA+ +F +M+ VKP++
Sbjct: 680 LNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDK 739
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF L+ LV G + F+ + + G++ + ++ L + G L EA L R
Sbjct: 740 LTFSTTLNVSGGSALVSDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFR 798
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 175/391 (44%), Gaps = 39/391 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+Q+ L + I+ G + A++IF+ + +V + I A Q A L+
Sbjct: 55 GLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALF 114
Query: 65 NK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ S+ P++Y+ +L A + +GR IH GL+ A L+
Sbjct: 115 RTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLER-ASTTATLVG---- 169
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
N M+ YAK G L +A A+F + EK+V+SWT +
Sbjct: 170 ------------------------NAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAG 205
Query: 184 GYAQMDQ--PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
YAQ + P+ A+ +FR M ++ + P+ I + AL AC L G W+H+ + + L
Sbjct: 206 AYAQERRFYPD-ALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEASL 261
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVITWTTMIAGLALHGLGREALDM 298
+NALI+MY K G A VF+ M ++ +++W MI+ G +A+ +
Sbjct: 262 GFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F R+ ++PN +T I IL+A G+ R F+ G + +I +
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYA 381
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
+ G+ A + RR+ ++ + W ++L AS
Sbjct: 382 KCGFFSAAWAVFRRIRWKCDVISWNTMLGAS 412
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 168/377 (44%), Gaps = 63/377 (16%)
Query: 29 AYSIF---THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
AYS+F + + D+ +N I A + +A+ ++ +++ +RP++ + +L A
Sbjct: 284 AYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNA 343
Query: 86 VVKLSTIELG--REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ S ++ G R H + +G DV + A+I M
Sbjct: 344 LAA-SGVDFGAARGFHGRIWESGYLRDVVIGNAIISM----------------------- 379
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
YAK G + A A+F + K +VISW T++ + + F M
Sbjct: 380 ----------YAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML 429
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKS 258
+ + P++++ +A L+AC+ A++ G IH+ I Y +++ + L+ MY K
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM---LVSMYGKC 486
Query: 259 GKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
G I +A VF+ M ++S++TW M+ A + +EA M + V P+ ++F +
Sbjct: 487 GSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTS 546
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRR 372
+LS+C ++ R I++S Y + C +I + GR L++A +
Sbjct: 547 VLSSCYCSQEAQVLR--MCILESGY-------RSACLETALISMHGRCRELEQARSVFNE 597
Query: 373 MPFEANAAIWGSLLAAS 389
M + W ++++A+
Sbjct: 598 MD-HGDVVSWTAMVSAT 613
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 144/352 (40%), Gaps = 38/352 (10%)
Query: 24 GFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
GF A+++F + K DV +NT + A + V ++ + + + P+ SF +
Sbjct: 384 GFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAI 443
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLD-SDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
L A ++ GR+IH + D + V L+ MY C I +A VF E+ L
Sbjct: 444 LNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPS 503
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++ WN M+ YAQ D+ EA M
Sbjct: 504 RSLVTWNVML-------------------------------GAYAQNDRSKEAFGALMEM 532
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
V PD ++ + LS+C + + + I + G + L ALI M+ + ++
Sbjct: 533 LQGGVLPDALSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC-LETALISMHGRCREL 588
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A VF M + V++WT M++ A + +E ++F RM+ V P++ T L C
Sbjct: 589 EQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC 648
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ LG + + + G+E I ++++ G +EA M
Sbjct: 649 LASTTLGLG-KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + + + ++ S+ G A S F D+ +N A Q AV+L+
Sbjct: 668 GLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLF 727
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q ++PD +F L + + G+ H +GLDSDV V L+++YA C
Sbjct: 728 RQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKC 787
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G L+ A +LF + V+ +I
Sbjct: 788 ---------------------------------GKLDEAMSLFRGACDWTVVLLNAIIGA 814
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
AQ EA+ +F +MQ E V+PD +++ +SAC G VE G E +G++
Sbjct: 815 LAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISP 874
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ +D+ ++G++ A Q+ M + + WT+++ L G
Sbjct: 875 TLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
A L +C + G+ H I GL + L N LI+MY + G + +A +F M+ +
Sbjct: 30 ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRY 333
+V++WT +I+ A G A +F M + PN T +A+L+AC + + +GR
Sbjct: 90 NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS- 148
Query: 334 FNIMKSRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ M G+E MI++ + G L++A + +P E + W ++ A
Sbjct: 149 IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP-EKDVVSWTAMAGA 206
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 275/506 (54%), Gaps = 64/506 (12%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQT 102
L NT ++A P A+ ++ + + D +++ F++KA+ + R H
Sbjct: 174 LANTLLRAYALNSLPHAALAVF--VDMPLRQRDTFTYSFLIKALATAGVTPV-RAAHTHV 230
Query: 103 VGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---VWNVAV------------- 146
G D V ALI Y+ + DA+KVFDE++ R WN A+
Sbjct: 231 FKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAAR 290
Query: 147 -------------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY-------- 185
WNTM+ GYAK G+ A LF+ M +NV+SW+T+++ Y
Sbjct: 291 SMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEM 350
Query: 186 -----------------------AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
AQ EA LF M+ ++ D +A+++ L+ACA+
Sbjct: 351 ARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAE 410
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN-MKNKSVITWTT 281
G + LG+ IH ++ Q L + NAL+DM+ K G + +A +F+ + K ++W
Sbjct: 411 SGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNI 470
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRY 341
+I G A+HG G +AL++F++M++ P+ +T I +LSAC H+GLVE GRR+F M++ Y
Sbjct: 471 IIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDY 530
Query: 342 GIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECA 401
GI+P+IE YGCM+DLLGR G ++EA +++ MP+E N IWGSLL+A ++ +VE E A
Sbjct: 531 GIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELA 590
Query: 402 LQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 461
L L+P N+GNYA+LSNIYA G+W++ K R M+ G +K G S+IE+ + HE
Sbjct: 591 ANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHE 650
Query: 462 FVAGDTSHPDFDRLYQILCKINGQMK 487
F GD HP+ D++ ++ +++ +K
Sbjct: 651 FTVGDRKHPESDQISDMIDRLSSHVK 676
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 34/268 (12%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A IF ++ + + A Q A L+ +++ +A+ D + +L
Sbjct: 346 GDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSIL 405
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + + LG+ IH L V AL+ M+ C C+ A +FD + +
Sbjct: 406 AACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDS 465
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V+ WN ++ G+A + G+ + +A+ LF +M+
Sbjct: 466 VS-WNIIIGGFA--------------------------MHGHGE-----KALNLFTQMKQ 493
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ PD + ++ LSAC +G VE G + N YG+ + ++D+ + G I
Sbjct: 494 QGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIK 553
Query: 263 KALQVFENMK-NKSVITWTTMIAGLALH 289
+A+ + ++M + + W ++++ LH
Sbjct: 554 EAVDMIKSMPWEPNEVIWGSLLSACRLH 581
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 138/352 (39%), Gaps = 90/352 (25%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYA------SCKCIYDARKVFDELSLRVWNVAVWNT 149
+E+H Q + GL D + LI YA +C+C++ A + NT
Sbjct: 121 QELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAAAAPPFAPS---TALLANT 177
Query: 150 MVAGYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++ YA + A A+F M +++ +++ LI A +T R
Sbjct: 178 LLRAYALNSLPHAALAVFVDMPLRQRDTFTYSFLIKALA-----TAGVTPVR-------- 224
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS--------- 258
AA + +LG+VE +T V NALID Y+K+
Sbjct: 225 -------AAHTHVFKLGSVE--------------DTFV--GNALIDAYSKNDGLSDAKKV 261
Query: 259 ----------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
G++ A +F+ M K ++W TM+ G A G EA
Sbjct: 262 FDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAF 321
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++F RM V +++ ++SA C G +E+ R F+ M ++ + + M+
Sbjct: 322 ELFQRMPGRNV----VSWSTVVSAYCKKGDMEMARVIFDKMPAK-----NLVTWTIMVSA 372
Query: 357 LGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ G + EA +L M E + S+LAA G + LG+ +H+
Sbjct: 373 CAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALGKRIHRHV 424
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 269/493 (54%), Gaps = 41/493 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKP----DVYLYNTTIKALCQTDNPLNA 60
GL + +L+ I+ SS + A + S P D +NT I + P A
Sbjct: 123 GLVSDTFVLNSLINMYSSCSYPATARQVL--DSAPQGACDTVSWNTIISGYLRGGMPNKA 180
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ + ++ + D+ + L A K +++GR H V G + ++ ++LI M
Sbjct: 181 LQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAGINCYMGSSLISM 240
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA K G + +AR +F M E+NV+ WT+
Sbjct: 241 YA---------------------------------KCGLVEDARKVFHGMHERNVVCWTS 267
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I+GY Q+ + EA+ LFR MQ+ +K D+ + +S+CAQ+GA++LG ++H Y + +G
Sbjct: 268 MISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHG 327
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L + + N+LIDMY+K G I KA ++F + + V +WT MI G ++GL EALD+F+
Sbjct: 328 LGKELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFA 387
Query: 301 RME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+ME +V PNE+TF+ +L++C H GLVE G YF M Y + P+IE YGCM+DLLGR
Sbjct: 388 QMEGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGR 447
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
A L EAE+ ++ MP + +W SLL A G+V L E + +++LEP + +L
Sbjct: 448 AKLLTEAEQFIKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLL 507
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SN+YA RW + ++R M + + K PGCS+IEV VHEF AGD SH + + +Y IL
Sbjct: 508 SNVYATTSRWVDVNELRTSMDNSRMSKQPGCSFIEVDGCVHEFFAGDESHLETEAIYNIL 567
Query: 480 CKINGQMKFAEHL 492
I+ ++ AE L
Sbjct: 568 LGIS-ELLVAESL 579
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 133/322 (41%), Gaps = 38/322 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G N ++ S I + G + A +F + +V + + I Q A
Sbjct: 222 VVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEA 281
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+ +Q + ++ D+ + V+ + ++ ++LGR +H GL ++ V +LI M
Sbjct: 282 VNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDM 341
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C I A ++F L+ R +V W M+ G+ G
Sbjct: 342 YSKCGDINKAHEIFCGLTKR--DVFSWTAMIMGFTVNG---------------------- 377
Query: 181 LIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQ 238
+EA+ LF +M+ E V P+E+ L L++C+ G VE G +
Sbjct: 378 ---------LCSEALDLFAQMEGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMV 428
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALD 297
Y L + ++D+ ++ + +A Q +NM V+ W +++ A G L
Sbjct: 429 YKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVVVWRSLL--FACRACGEVGLA 486
Query: 298 MFSRMERARVKPNEITFIAILS 319
F ++P + +LS
Sbjct: 487 EFVAERILELEPKKCAGHVLLS 508
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/489 (34%), Positives = 272/489 (55%), Gaps = 38/489 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D S D A + K D+ +N I Q + L+AV L++K+ + + +
Sbjct: 325 LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ VLK+V L I++ ++IH ++ +G+ SD +V+ +L+ Y C I
Sbjct: 385 QTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHI-------- 436
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ A +FE T ++++++T++I Y+Q EA+
Sbjct: 437 -------------------------DEASKIFEERTWEDLVAYTSMITAYSQYGDGEEAL 471
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L+ +MQ ++KPD + L+ACA L A E G+ +H + ++G + +N+L++MY
Sbjct: 472 KLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMY 531
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G I A + F + N+ +++W+ MI G A HG G+EAL +F++M R V PN IT +
Sbjct: 532 AKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLV 591
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
++L AC H GLV G++YF M+ +GI+P E Y CMIDLLGR+G L EA +L+ +PF
Sbjct: 592 SVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPF 651
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
EA+ +WG+LL A+ I+ ++ELG+ A + L LEP SG + +L+NIYA G W K+
Sbjct: 652 EADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKV 711
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
RK M+D VKK PG S+IE+ +V+ F+ GD SH D +Y L ++ + A
Sbjct: 712 RKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKA-----G 766
Query: 496 FSGVLESDV 504
+S ++E D+
Sbjct: 767 YSSIVEIDI 775
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 182/385 (47%), Gaps = 39/385 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
NHL++ + C G YA + S+ DV +++ + Q A++++N++
Sbjct: 20 NHLVTLY-SKCRRFG---YARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCL 75
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
++ + ++FP VLKA + +GR++H V TG +SD V L+ MYA C + D
Sbjct: 76 LGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDD 135
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
+R++F + R NV WN L + Y Q +
Sbjct: 136 SRRLFGGIVER--NVVSWN-------------------------------ALFSCYVQSE 162
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
EA+ LF+ M + P+E ++ L+ACA L +LG IH + + GL+ N
Sbjct: 163 LCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSAN 222
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+DMY+K+G+I A+ VF+++ + V++W +IAG LH AL + M+ + +P
Sbjct: 223 ALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRP 282
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
N T + L AC +G ELGR+ + + G ++D+ + + +A +
Sbjct: 283 NMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG-LVDMYSKCEMMDDARRA 341
Query: 370 LRRMPFEANAAIWGSLLAASNIYGD 394
MP + + W +L++ + GD
Sbjct: 342 YDSMP-KKDIIAWNALISGYSQCGD 365
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 183/374 (48%), Gaps = 34/374 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ GLD + + +D S G + A ++F + PDV +N I D A
Sbjct: 209 MLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLA 268
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
++L ++++ S RP+ ++ LKA + ELGR++H + SD+ L+ M
Sbjct: 269 LMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDM 328
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C+ + DAR+ ++ M +K++I+W
Sbjct: 329 YSKCEMMDDARRA---------------------------------YDSMPKKDIIAWNA 355
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI+GY+Q +A++LF +M E++ ++ + L + A L A+++ + IH + G
Sbjct: 356 LISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSG 415
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ + + N+L+D Y K I +A ++FE + ++ +T+MI + +G G EAL ++
Sbjct: 416 IYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYL 475
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+M+ A +KP+ ++L+AC ++ E G++ ++ ++G I ++++ +
Sbjct: 476 QMQDADIKPDPFICSSLLNACANLSAYEQGKQ-LHVHAIKFGFMCDIFASNSLVNMYAKC 534
Query: 361 GYLQEAEKLLRRMP 374
G +++A++ +P
Sbjct: 535 GSIEDADRAFSEIP 548
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 183/408 (44%), Gaps = 38/408 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+V G + + + + + + G D + +F + +V +N Q++ AV
Sbjct: 109 VVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAV 168
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++ S + P+ +S +L A L +LGR+IH + GLD D AL+ MY
Sbjct: 169 GLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMY 228
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
+ I A VF +++ +V+SW +
Sbjct: 229 SKAGEIEGAVAVFQDIA---------------------------------HPDVVSWNAI 255
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
IAG D + A+ L M+ +P+ + +AL ACA +G ELG +H+ + +
Sbjct: 256 IAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDA 315
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
++ + L+DMY+K + A + +++M K +I W +I+G + G +A+ +FS+
Sbjct: 316 HSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSK 375
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M + N+ T +L + + +++ ++ I + GI ++D G+
Sbjct: 376 MFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTI-SIKSGIYSDFYVINSLLDTYGKCN 434
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
++ EA K+ +E A + S++ A + YGD GE AL+ ++++
Sbjct: 435 HIDEASKIFEERTWEDLVA-YTSMITAYSQYGD---GEEALKLYLQMQ 478
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 38/307 (12%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G+ + ++++ +D+ D A IF ++ D+ Y + I A Q + A+
Sbjct: 412 IKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEAL 471
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY ++Q + ++PD + +L A LS E G+++H + G D+ +L+ MY
Sbjct: 472 KLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMY 531
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C I DA + F E+ R + W+ M+ GYA+ G
Sbjct: 532 AKCGSIEDADRAFSEIPNR--GIVSWSAMIGGYAQHG----------------------- 566
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYG 240
EA+ LF +M + V P+ I +++ L AC G V G+ +E +G
Sbjct: 567 --------HGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFG 618
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV-ITWTTMIAGLALHG---LGREAL 296
+ +ID+ +SGK+ +A+++ ++ ++ W ++ +H LG++A
Sbjct: 619 IKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAA 678
Query: 297 DMFSRME 303
M +E
Sbjct: 679 KMLFDLE 685
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 97 EIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAK 156
E+H + G D + L+ +Y+ C+ ARK+ DE S +V W+++++GY +
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESS--ELDVVSWSSLLSGYVQ 59
Query: 157 VGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAA 216
G + EA+ +F M + VK +E +
Sbjct: 60 NGFV-------------------------------EEALLVFNEMCLLGVKCNEFTFPSV 88
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L AC+ + +G +H G + + N L+ MYAK G + + ++F + ++V
Sbjct: 89 LKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNV 148
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
++W + + L EA+ +F M R+ + PNE + IL+AC + +LGR+ +
Sbjct: 149 VSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGL 208
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
M + G++ ++D+ +AG ++ A + + + + W +++A
Sbjct: 209 ML-KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIAG 258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 18/252 (7%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
+H ++ ++G + L N L+ +Y+K + G A ++ + V++W+++++G +G
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
EAL +F+ M VK NE TF ++L AC + +GR+ M G E
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHG-MAVVTGFESDGFVAN 121
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL-GECA--LQHLIK- 407
++ + + G L ++ +L + E N W +L + Y EL GE + +++
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALFSC---YVQSELCGEAVGLFKEMVRS 177
Query: 408 -LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG--VKKMPGCSYIEVSKRVHEF-- 462
+ P N + +I+ N A L + KI +M MG + + + +++ + E
Sbjct: 178 GIMP-NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEG 236
Query: 463 ---VAGDTSHPD 471
V D +HPD
Sbjct: 237 AVAVFQDIAHPD 248
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 256/410 (62%), Gaps = 7/410 (1%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGRE----IHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
P++ + VL A + L R +H + + S + + L++ Y + + +
Sbjct: 65 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 123
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A ++FD + +R + +NT+++G + G + A +F+ M + +SWT LI G +
Sbjct: 124 ALQLFDAMPVR--SAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNG 181
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+ +EAI FR M ++ V+PD + ++A +SACA++GA+ LG W+H + + GL V + N
Sbjct: 182 RHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIAN 241
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+LIDMYA+ G++ A QVF M+ ++V++W +MI G A +G +A++ F M R KP
Sbjct: 242 SLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKP 301
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ +TF +L+AC H GL + G RY+++M++ YGI ++E YGC++DLLGR+G L+EA ++
Sbjct: 302 DAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRV 361
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ MP N + G+LLA ++GDV + E +QHL++L+P NY +LSNIYA +G+W
Sbjct: 362 VTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKW 421
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ +GK+R +M+ G++K PG S +E+ VHEFV+GD SHP + + Q+L
Sbjct: 422 DGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 471
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G A+ +F PD + I + A+ + + + PD + V+
Sbjct: 150 GLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIAVI 209
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A ++ + LG +H V GL+ +V + +LI MYA C + AR+VF +R
Sbjct: 210 SACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFS--GMRKRT 267
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V WN+M+ G+A G +A FE M RR
Sbjct: 268 VVSWNSMIVGFAANGRCADAVEHFEAM----------------------------RR--- 296
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIG 262
E KPD + L+AC+ G + G ++ + +YG+ + ++D+ +SG++
Sbjct: 297 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLE 356
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALHG 290
+A++V M + + + ++AG +HG
Sbjct: 357 EAMRVVTTMPMRPNEVVLGALLAGCRMHG 385
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 24/270 (8%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTE------KNVISWTTLIAGYAQMDQPNEAIT 196
+VA W + +A AK GDL A A M N ++ T+++ A D P+
Sbjct: 29 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACA--DSPSS--P 84
Query: 197 LFRRMQVENVKPDEIAMLAA---LSACAQ--LGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
L RR+ + +V + + + LS C A L + + + V N +
Sbjct: 85 LARRLAL-SVHARVLKLFPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNT-V 142
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
I ++G + A +VF+ M ++WT +I G +G EA++ F M V+P+
Sbjct: 143 ISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDY 202
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+T IA++SAC VG + LG + + + R G+E + +ID+ R G ++ A ++
Sbjct: 203 VTLIAVISACAEVGALGLG-MWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFS 261
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECA 401
M + W S+ I G G CA
Sbjct: 262 GM-RKRTVVSWNSM-----IVGFAANGRCA 285
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 263/523 (50%), Gaps = 81/523 (15%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
+V+ +N I P Y K++ + PD ++FP +KA + + I ++IH
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIH 159
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV-- 157
GL+ DV + +AL+ Y + A+ F+EL +R +V +WN MV GYA++
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR--DVVLWNAMVNGYAQIGQ 217
Query: 158 ---------------------------------GDLNNAR-------------------- 164
GDLNN R
Sbjct: 218 FEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 277
Query: 165 ---------------ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+FE+M EK++ SW ++++ + Q + + L RM ++PD
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI------VPLNNALIDMYAKSGKIGK 263
+ + L AC+ L A+ G IH Y+ GL V L NA+IDMYAK G +
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VFE M NK V +W MI G +HG G EAL+MFSRM ++KP+E+TF+ +LSAC H
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 457
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G V GR + MKS+Y + P IE Y C+ID+LGRAG L EA +L MP EAN +W
Sbjct: 458 AGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LLAA ++ L E A Q + +LEP + G+Y ++SN+Y +GR+ E ++R MR
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 577
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
V+K PGCS+IE+ VH FV+ D +HP+ +Y L + ++
Sbjct: 578 VRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARL 620
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 35/290 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + + ID + A IF + D++ +N+ + Q + + L
Sbjct: 267 GYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLL 326
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + ++PD + VL A L+ + GREIH + +GL D
Sbjct: 327 DRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD-------------- 372
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
K D++ L+ N ++ YAK G + +A +FE M+ K+V SW +I G
Sbjct: 373 ------GKDIDDVLLK-------NAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMG 419
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ----YG 240
Y NEA+ +F RM +KPDE+ + LSAC+ G V G N++ Q Y
Sbjct: 420 YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR---NFLVQMKSKYD 476
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ + +IDM ++G++ +A ++ M + + W ++A LH
Sbjct: 477 VAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
E NV ++ +I+G+ P E +++M+ E V PD+ A+ AC L +E+ +
Sbjct: 101 EINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKAC--LDVLEIKK- 157
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + ++GL V + +AL++ Y K G + A FE + + V+ W M+ G A G
Sbjct: 158 IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ 217
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
L+ F RM V P+ T LS +G + G R + + G + +
Sbjct: 218 FEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNG-RIIHGFAMKMGYDSGVAVSN 276
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ID+ G+ +++A ++ M E + W S+++ GD
Sbjct: 277 SLIDMYGKCKCIEDALEIFEMMR-EKDIFSWNSIVSVHEQCGD 318
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 256/410 (62%), Gaps = 7/410 (1%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGRE----IHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
P++ + VL A + L R +H + + S + + L++ Y + + +
Sbjct: 99 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 157
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A ++FD + +R + +NT+++G + G + A +F+ M + +SWT LI G +
Sbjct: 158 ALQLFDAMPVR--SAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNG 215
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+ +EAI FR M ++ V+PD + ++A +SACA++GA+ LG W+H + + GL V + N
Sbjct: 216 RHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIAN 275
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+LIDMYA+ G++ A QVF M+ ++V++W +MI G A +G +A++ F M R KP
Sbjct: 276 SLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKP 335
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ +TF +L+AC H GL + G RY+++M++ YGI ++E YGC++DLLGR+G L+EA ++
Sbjct: 336 DAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRV 395
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ MP N + G+LLA ++GDV + E +QHL++L+P NY +LSNIYA +G+W
Sbjct: 396 VTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKW 455
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ +GK+R +M+ G++K PG S +E+ VHEFV+GD SHP + + Q+L
Sbjct: 456 DGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 505
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G A+ +F PD + I + A+ + + + PD + V+
Sbjct: 184 GLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVI 243
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A ++ + LG +H V GL+ +V + +LI MYA C + AR+VF +R
Sbjct: 244 SACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFS--GMRKRT 301
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V WN+M+ G+A G +A FE M RR
Sbjct: 302 VVSWNSMIVGFAANGRCADAVEHFEAM----------------------------RR--- 330
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIG 262
E KPD + L+AC+ G + G ++ + +YG+ + ++D+ +SG++
Sbjct: 331 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLE 390
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALHG 290
+A++V M + + + ++AG +HG
Sbjct: 391 EAMRVVTTMPMRPNEVVLGALLAGCRMHG 419
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 24/270 (8%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTE------KNVISWTTLIAGYAQMDQPNEAIT 196
+VA W + +A AK GDL A A M N ++ T+++ A D P+
Sbjct: 63 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACA--DSPSS--P 118
Query: 197 LFRRMQVENVKPDEIAMLAA---LSACAQ--LGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
L RR+ + +V + + + LS C A L + + + V N +
Sbjct: 119 LARRLAL-SVHARVLKLFPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNT-V 176
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
I ++G + A +VF+ M ++WT +I G +G EA+D F M V+P+
Sbjct: 177 ISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDY 236
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+T IA++SAC VG + LG + + + R G+E + +ID+ R G ++ A ++
Sbjct: 237 VTLIAVISACAEVGALGLG-MWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFS 295
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECA 401
M + W S+ I G G CA
Sbjct: 296 GM-RKRTVVSWNSM-----IVGFAANGRCA 319
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 256/410 (62%), Gaps = 7/410 (1%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGRE----IHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
P++ + VL A + L R +H + + S + + L++ Y + + +
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 68
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A ++FD + +R + +NT+++G + G + A +F+ M + +SWT LI G +
Sbjct: 69 ALQLFDAMPVR--SAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNG 126
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+ +EAI FR M ++ V+PD + ++A +SACA++GA+ LG W+H + + GL V + N
Sbjct: 127 RHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIAN 186
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+LIDMYA+ G++ A QVF M+ ++V++W +MI G A +G +A++ F M R KP
Sbjct: 187 SLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKP 246
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ +TF +L+AC H GL + G RY+++M++ YGI ++E YGC++DLLGR+G L+EA ++
Sbjct: 247 DAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRV 306
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ MP N + G+LLA ++GDV + E +QHL++L+P NY +LSNIYA +G+W
Sbjct: 307 VTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKW 366
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ +GK+R +M+ G++K PG S +E+ VHEFV+GD SHP + + Q+L
Sbjct: 367 DGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 416
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G A+ +F PD + I + A+ + + + PD + V+
Sbjct: 95 GLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVI 154
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A ++ + LG +H V GL+ +V + +LI MYA C + AR+VF +R
Sbjct: 155 SACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFS--GMRKRT 212
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V WN+M+ G+A G + +A+ F M+
Sbjct: 213 VVSWNSMIVGFAANG-------------------------------RCADAVEHFEAMRR 241
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIG 262
E KPD + L+AC+ G + G ++ + +YG+ + ++D+ +SG++
Sbjct: 242 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLE 301
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALHG 290
+A++V M + + + ++AG +HG
Sbjct: 302 EAMRVVTTMPMRPNEVVLGALLAGCRMHG 330
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 264/445 (59%), Gaps = 5/445 (1%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L RF + S LG YA+ +F P + YNT I+A + P + + +N ++ + +
Sbjct: 45 LFRFA-AVSPLGDLRYAHRMFDQMPHPTTFFYNTLIRAHAHSTTPSLSSLSFNLMRQNNV 103
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD +SF F+LK+ + + + ++H + G +HV LI YA+ AR+
Sbjct: 104 APDQFSFNFLLKSRSRTTPLTHHNDVHGAVLKFGFCRHLHVQNGLIHFYANRGMTLLARR 163
Query: 133 VFD---ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
VF+ +L L V +V W+ ++ + K G+L AR +F+ M +++V+SWT ++ GY+Q
Sbjct: 164 VFEDVLQLGLEV-DVVSWSGLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAK 222
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+P EA+ LF M+ V PDE+ M++ +SACA LG +E G +H ++E+ G +V L N
Sbjct: 223 RPREALELFGEMRRSGVWPDEVTMVSLVSACASLGDMETGMMVHRFVEENGFGWMVALCN 282
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
ALIDMY K G + +A +VF M KS+ITW TM+ A +G EA +F M + V P
Sbjct: 283 ALIDMYGKCGCLEEAWRVFHGMTRKSLITWNTMVTVCANYGNADEAFRLFEWMVCSGVVP 342
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ +T +A+L A H GLV+ G R F M YG+EP+IE YG +ID+LGRAG LQEA L
Sbjct: 343 DSVTLLALLVAYAHKGLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDL 402
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
L +P N A+WG+LL A I+GDVE+GE ++ L++L+P G Y +L +IY G+
Sbjct: 403 LTNIPIPCNDAVWGALLGACRIHGDVEMGEKLIKKLLELKPDEGGYYILLRDIYVAAGQT 462
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIE 454
E+ + R+ M +K PGCS++E
Sbjct: 463 VEANETRQAMLASRARKNPGCSWVE 487
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 267/479 (55%), Gaps = 41/479 (8%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L F C G A +F DV + I + AV L+ ++ +
Sbjct: 75 LVHFYSVCKRFG---DASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMD---V 128
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P+ +F VL A + + +G+ IH + + + V AL+ MY C C
Sbjct: 129 EPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGC------ 182
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
L A+ +F+ + EK+++SWT++I+G Q + P
Sbjct: 183 ---------------------------LPGAKQVFDELAEKDIVSWTSIISGLVQCNCPK 215
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ LF+ MQ ++PD I + + LSACA+LGA++ G W+H +I++ + + + A++
Sbjct: 216 EALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMV 275
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G I ++Q+F M +K+V+TW ++ GLA+HG + L++F M R ++PNE+
Sbjct: 276 DMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEV 335
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKS-RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
TF+AIL+ACCH GLV GR+YFN MK +Y + P++E YGCM+DLL RA L EA +L +
Sbjct: 336 TFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTK 395
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP + I G+LL+A G+ EL + L ++L+ H+SG Y +LSNI+AI RW++
Sbjct: 396 AMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDD 455
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
+IR++M++ G+KK PG + IE+ + HEF+ GDT HP D+ ++L KI F E
Sbjct: 456 VTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVGDTRHPQ-DKRIRLLLKILSDQIFLE 513
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 175/350 (50%), Gaps = 38/350 (10%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N + D P A ++Y +I PD ++FP VLK+ K I GR++H +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
G +++V +L+ Y+ CK + GD A
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCK------------------------------RFGD---A 88
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+F+ M ++V+SWT +I+GY + +EA+ LF RM VE P+ ++ L AC +
Sbjct: 89 SRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDVE---PNAATFVSVLVACGRK 145
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
G + +G+ IH + + ++NAL+DMY K G + A QVF+ + K +++WT++I
Sbjct: 146 GYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSII 205
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
+GL +EAL++F M+ + ++P+ I ++LSAC +G ++ G R+ + R I
Sbjct: 206 SGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYG-RWVHEHIDRKAI 264
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ I+ M+D+ + G ++ + ++ MP + N W +LL ++G
Sbjct: 265 KWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK-NVLTWNALLNGLAMHG 313
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 136/305 (44%), Gaps = 43/305 (14%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ +N L+ ++ C L A +F ++ D+ + + I L Q + P A+ L+
Sbjct: 166 GLEVSNALMDMYV-KCGCL---PGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELF 221
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q+S + PD VL A +L ++ GR +H + D+ + A++ MYA C
Sbjct: 222 QDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKC 281
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
CI + ++F+ + + NV WN ++ G A + G
Sbjct: 282 GCIEMSMQIFNGMPHK--NVLTWNALLNGLA--------------------------MHG 313
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLN 242
+A + + LF M ++P+E+ LA L+AC G V G N++ +QY L
Sbjct: 314 HAY-----KVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLP 368
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDM 298
+ ++D+ ++ + +AL++ + M + V +++ +G L +E LD
Sbjct: 369 PRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDR 428
Query: 299 FSRME 303
F ++
Sbjct: 429 FVELD 433
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 255/494 (51%), Gaps = 33/494 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+ D +N++ +D + G D A +F + D+ L+N I A
Sbjct: 329 MVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEA 388
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ + + VLK+ L I R++H G SD HVV LI
Sbjct: 389 LSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDS 448
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y C C LN A +FE ++I++T+
Sbjct: 449 YWKCDC---------------------------------LNYAYRVFEKHGSYDIIAFTS 475
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I +Q D +AI LF M + + PD + + L+ACA L A E G+ +H ++ +
Sbjct: 476 MITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V NAL+ YAK G I A F + K V++W+ MI GLA HG G+ ALD+F
Sbjct: 536 FMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFH 595
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
RM + PN IT ++L AC H GLV+ +RYFN MK +GIE E Y CMIDLLGRA
Sbjct: 596 RMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRA 655
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L +A +L+ MPF+ NAA+WG+LLAAS ++ D ELG A + L LEP SG + +L+
Sbjct: 656 GKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLA 715
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
N YA G W++ K+RK+M+D VKK P S++E+ +VH F+ GD SHP +Y L
Sbjct: 716 NTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLD 775
Query: 481 KINGQMKFAEHLQN 494
++ M A ++ N
Sbjct: 776 ELGDLMTKAGYVPN 789
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 41/379 (10%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
NHLLS F C G A +F P +++ + A P +A+ + +++
Sbjct: 41 NHLLS-FYSKCRLPG---SARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRS 96
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
++R + + P VLK G ++H + TGL D+ V AL+ MY + +
Sbjct: 97 CSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDE 153
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
AR VFDE AG E+N +SW L++ Y + D
Sbjct: 154 ARMVFDE---------------AG-----------------CERNTVSWNGLMSAYVKND 181
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
+ + A+ +F M V+P+E ++AC +E G +H + + G + V N
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+DMY+K G I A VF + V++W I+G LHG + AL++ +M+ + + P
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
N T +IL AC G LGR+ M +G ++D+ + G L +A+K+
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDAKKV 360
Query: 370 LRRMPFEANAAIWGSLLAA 388
+P + + +W +L++
Sbjct: 361 FDWIP-QRDLVLWNALISG 378
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 200/443 (45%), Gaps = 45/443 (10%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
M++R G D++ + +D S LG A +F + DV +N I + +
Sbjct: 227 MVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQH 286
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ L ++++S L P+ ++ +LKA LGR+IH V DSD ++ L+
Sbjct: 287 ALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVD 346
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA K G L++A+ +F+ + +++++ W
Sbjct: 347 MYA---------------------------------KHGLLDDAKKVFDWIPQRDLVLWN 373
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
LI+G + Q EA++LF RM+ E + + A L + A L A+ +H E+
Sbjct: 374 ALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKL 433
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + + N LID Y K + A +VFE + +I +T+MI L+ G +A+ +F
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLF 493
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLG 358
M R + P+ ++L+AC + E G++ + +++K ++ + ++
Sbjct: 494 MEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDVFAGNALVYTYA 551
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL-EPHNSGNYA 417
+ G +++A+ +P E W +++ +G G+ AL ++ + H S N+
Sbjct: 552 KCGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQHGH---GKRALDVFHRMVDEHISPNHI 607
Query: 418 ILSNIYAILGRWNESGKIRKVMR 440
++ ++L N +G + + R
Sbjct: 608 TMT---SVLCACNHAGLVDEAKR 627
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 34/299 (11%)
Query: 23 LGFSDYAYSIFTHKS-KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
GF D A +F + + +N + A + D +AV ++ ++ ++P+ + F
Sbjct: 148 FGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSC 207
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
V+ A +E GR++H + TG D DV AL+ M
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDM--------------------- 246
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
Y+K+GD+ A +F + E +V+SW I+G A+ L +M
Sbjct: 247 ------------YSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQM 294
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
+ + P+ + + L ACA GA LG IH ++ + ++ + L+DMYAK G +
Sbjct: 295 KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLL 354
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
A +VF+ + + ++ W +I+G + EAL +F RM + N T A+L +
Sbjct: 355 DDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 8/283 (2%)
Query: 113 VVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW-NTMVAGYAKVGDLNNARALFELMT 171
+ L+ YA+ + + + L L+ AV+ N +++ Y+K +AR +F+ +
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHL-LKSGLFAVFRNHLLSFYSKCRLPGSARRVFDEIP 64
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
+ +SW++L+ Y+ P +A+ FR M+ +V+ +E + L G G
Sbjct: 65 DPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQ 121
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+H GL + + NAL+ MY G + +A VF+ ++ ++W +++ +
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKND 181
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
A+ +F M V+PNE F +++AC +E GR+ + M R G + +
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRK-VHAMVIRTGYDKDVFTA 240
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
++D+ + G ++ A + ++P E + W + ++ ++G
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLHG 282
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 264/447 (59%), Gaps = 1/447 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A + + +V + + I + P +AV +N + + + PD + L
Sbjct: 185 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGAL 244
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A KL ++LGR +H + ++V ALI MYA C I A+ VFD + R
Sbjct: 245 SACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVG-RGQK 303
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN ++ GY K+G ++ AR+LF+ M ++VI++ ++I GY + +A+ LF +M+
Sbjct: 304 PEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRR 363
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
++ D +++ L+ACA LGA+ G +H IEQ + V L AL+DMY K G++ +
Sbjct: 364 HGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDE 423
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF M + V TWT MIAGLA +G+G++AL+ F +M+R +P +T+IA+L+AC H
Sbjct: 424 ATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSH 483
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
L++ GR +FN M+S + + P++E YGCMIDLL R+G L EA L++ MP + NA IWG
Sbjct: 484 SSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWG 543
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
S+L+A ++ +++L A +HL+KL P Y L NIY +W ++ ++R +M + G
Sbjct: 544 SILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERG 603
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHP 470
VKK G S I V+ +VH+FVA D SHP
Sbjct: 604 VKKTAGYSSITVAGQVHKFVANDQSHP 630
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 215/439 (48%), Gaps = 49/439 (11%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQT----DNPLNAVILYN 65
HLLS ++ S+ Y S+F +L++T ++A Q D+P V+L
Sbjct: 35 EHLLSSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDTALRACLQASAGADHP---VLLLR 91
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIE--LGREIHCQTVGTGLDSDVHVVA-ALIQMYA 122
++++ +R ++F FV + + L +H + T L S +VA LI MYA
Sbjct: 92 RMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACLRTMLPSAAPLVANPLIHMYA 151
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
S DAR+ FDE+ + + VW T++ G + G L+ AR L E+NV+SWT+LI
Sbjct: 152 SMGLTDDARRAFDEIPAK--DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLI 209
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
AGY++ +P +A+ F M + V PDE+A++ ALSAC++L ++LG +H + Q +
Sbjct: 210 AGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIR 269
Query: 243 TIVPLNNALIDMYAKSGKIGKALQV--------------------------------FEN 270
L ALIDMYAK G I +A V F+
Sbjct: 270 MTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQ 329
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M + VIT+ +MI G G R+AL +F +M R ++ + T +++L+AC +G + G
Sbjct: 330 MGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHG 389
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
R ++ R +E + ++D+ + G + EA + RM E + W +++A
Sbjct: 390 RALHASIEQRI-VEEDVYLGTALLDMYMKCGRVDEATAVFHRMG-ERDVHTWTAMIAGLA 447
Query: 391 IYGDVELGECALQHLIKLE 409
G +G+ AL+ +++
Sbjct: 448 FNG---MGKDALESFCQMK 463
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 121/287 (42%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G Q + ID LG D A S+F DV +N+ I + +A+ L+
Sbjct: 299 GRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLF 358
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ +R DN++ +L A L + GR +H ++ DV++ AL+ MY C
Sbjct: 359 MQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKC 418
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +A VF + R +V W M+AG A G
Sbjct: 419 GRVDEATAVFHRMGER--DVHTWTAMIAGLAFNG-------------------------- 450
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNT 243
+A+ F +M+ + +P + +A L+AC+ ++ G N + + L+
Sbjct: 451 -----MGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHP 505
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
V +ID+ A+SG + +A+ + + M + + W ++++ +H
Sbjct: 506 QVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVH 552
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 295/560 (52%), Gaps = 77/560 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V GL + L+++ I + SS G +A +F +P V+ +N I+ + ++ +A
Sbjct: 44 LLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDA 103
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+++Y+K+Q + + PD+++FP +LKA LS +++GR +H Q G ++DV V LI +
Sbjct: 104 LLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIAL 163
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV----- 175
YA C+ + AR VF+ L L + W +V+ YA+ G+ A +F M + +V
Sbjct: 164 YAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCV 223
Query: 176 -------------------------------------ISWTTLIAGYAQMDQPNEAITLF 198
IS T+ YA+ Q A LF
Sbjct: 224 ALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTM---YAKCGQVATAKILF 280
Query: 199 RRMQVEN-------------------------------VKPDEIAMLAALSACAQLGAVE 227
+M+ N V+PD I++ +A+SACAQ+G++E
Sbjct: 281 DKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
W+ Y+ + V +++ALIDM+AK G + A VF+ ++ V+ W+ MI G
Sbjct: 341 QARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYG 400
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
LHG REA+ ++ MER V PN++TF+ +L AC H G+V G +FN M + + I P+
Sbjct: 401 LHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHKINPQQ 459
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
+ Y C+IDLLGRAG+L +A ++++ MP + +WG+LL+A + VELG+ A Q L
Sbjct: 460 QHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFS 519
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT 467
++P N+G+Y LSN+YA W+ ++R M++ G+ K GCS++EV R+ F GD
Sbjct: 520 IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDK 579
Query: 468 SHPDFDRLYQILCKINGQMK 487
SHP ++ + + + I ++K
Sbjct: 580 SHPRYEEIERQVEWIESRLK 599
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + GL L LI + G I A QVF+++ V W +I G + +
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNH 99
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
++AL M+S+M+ ARV P+ TF +L AC + +++G R+ + R G E +
Sbjct: 100 FQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG-RFVHAQVFRLGFEADVFVQN 158
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPF-EANAAIWGSLLAASNIYGD-VELGECALQ-HLIKL 408
+I L + L A + +P E W ++++A G+ VE E Q + +
Sbjct: 159 GLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDV 218
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
+P ++L N + L + I + MG++ P
Sbjct: 219 KPDCVALVSVL-NAFTCLQDLEQGRSIHASVMKMGLETEP 257
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 270/483 (55%), Gaps = 37/483 (7%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L RF S S LG ++A + + K +V +N I++ D+P A+ Y ++++ +
Sbjct: 57 LLRFCAS-SPLGNLNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGI 115
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD +FP +LKA +S GR+I + GLD
Sbjct: 116 SPDKLTFPILLKACAXISAFNEGRKIQVDVMKHGLDC----------------------- 152
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
NV V NTM+ Y + +AR +F+ M+ + V+SW +++ + N
Sbjct: 153 ----------NVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLN 202
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
++ LF +M+ PDE M+ LSAC++LG + G W+H+ + + G+ L AL+
Sbjct: 203 DSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALV 262
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G + +A VF M ++V TW+ MI GLA HG +EAL++F +M+++ + PN +
Sbjct: 263 DMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYV 322
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +L AC H GLV+ G R+F+ M+ +GIEP + YG M+D+L RAG L+EA +
Sbjct: 323 TFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILN 382
Query: 373 MPFEANAAIWGSLLAASNIYG---DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
MP EA+ +W +LL+A I+G + +G+ + L++LEP SGN+ +++N+YA +G+W
Sbjct: 383 MPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKW 442
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+++ +R+ M+D G+KKM G S IEV +H F +GD D + + Q+L +N MK
Sbjct: 443 DKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLDCEDVLQLLDGLNLHMKTV 502
Query: 490 EHL 492
+L
Sbjct: 503 SNL 505
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 35/289 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD N ++ + I S A +F S V +N + A + ++ L+
Sbjct: 149 GLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLF 208
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K++ S PD + +L A +L + GR +H Q + G+ + + AL+ MYA C
Sbjct: 209 VKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKC 268
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +A VF + R NV W+ M+ G A+ G
Sbjct: 269 GAVCEASLVFHRMLER--NVWTWSAMILGLAQ--------------------------HG 300
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+A+ EA+ LF +M+ ++ P+ + L L AC+ G V+ G + H+ +G+
Sbjct: 301 FAK-----EALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEP 355
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
++ A++D+ +++G++ +A NM + W T+++ +HG+
Sbjct: 356 MMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGI 404
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 279/513 (54%), Gaps = 43/513 (8%)
Query: 2 IVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
IV GL NN+ +S+ I C S+ G YA IF+ P+++ YNT I+A ++ P
Sbjct: 28 IVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQNPNLFAYNTLIRAYSRSSTPQL 87
Query: 60 AVILYN-KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL-DSDVHVVAAL 117
A+ + + + PD ++FPF++ A + LG++IH + G+ SD HV AL
Sbjct: 88 ALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTAL 147
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
++ YA C +GD AR LF+ + +V+
Sbjct: 148 VRFYAEC------------------------------CAMGD---ARKLFDEIPNLDVVQ 174
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI- 236
W L+ GY + EA+ FR M V V+PDE + AL CAQLGA++ G+WIH Y+
Sbjct: 175 WNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVT 234
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
++ L V + AL+DMYAK G I ++++VFE M ++V +W+ MI G ALHG R+A+
Sbjct: 235 KRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAM 294
Query: 297 DMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
RM+ ++P+ + + ++ AC H GL E G+ M++RYGI PK E Y CM+D
Sbjct: 295 QCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVD 354
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL----EPH 411
LL RAG L EA KL+RRMP + AA+WG+LL+ + +V+L E A + L+ +
Sbjct: 355 LLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTE 414
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
G Y LSNIY + ++ +IR+++ D +K PGCS IEV V++FV+GD SHP
Sbjct: 415 EDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPC 474
Query: 472 FDRLYQILCKINGQMKFAEHLQNEFSGVLESDV 504
+++++L ++ Q + +S E ++
Sbjct: 475 LAQIHEMLDLVSLQHSYKLAFHTTWSSCDEMEL 507
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 258/484 (53%), Gaps = 33/484 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD N + + +D + G A IF D +N I A Q ++ + L+
Sbjct: 402 GLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALF 461
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ S + PD+Y+F V+KA + G E+H + + +G+ D V +A+I MY C
Sbjct: 462 VSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMY--C 519
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
KC G L A + E + E+ +SW ++I+G
Sbjct: 520 KC-------------------------------GMLVEAEKIHERLEERTTVSWNSIISG 548
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
++ Q A++ F RM V PD L CA L VELG+ IH I + L++
Sbjct: 549 FSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSD 608
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + + ++DMY+K G + + +FE + +TW+ MI A HGLG +A+ +F M+
Sbjct: 609 VYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQL 668
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
VKPN FI++L AC H+G V+ G YF M+S YG++P++E Y CM+DLLGR+G +
Sbjct: 669 QNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVN 728
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA +L+ MPFEA+ IW +LL + G+VE+ E A L++L+P +S Y +LSN+YA
Sbjct: 729 EALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYA 788
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
I G W E KIR M++ +KK PGCS+I+V VH F+ GD +HP + +YQ +
Sbjct: 789 IAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVD 848
Query: 485 QMKF 488
+MK+
Sbjct: 849 EMKW 852
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 184/408 (45%), Gaps = 40/408 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G D + + +D S+ D+A++IF + + ++ I + D +
Sbjct: 197 IQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGL 256
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY + + +F ++ LS ELG ++H + T D V A + MY
Sbjct: 257 KLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMY 316
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C + DARKVF+ N R S L
Sbjct: 317 AKCDRMVDARKVFNTFP----------------------NPTRQ-----------SHNAL 343
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I GYA+ DQ EA+ +FR +Q + DEI++ AL+AC+ + G +H + GL
Sbjct: 344 IVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGL 403
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + + N ++DMYAK G + +A +F++M+ K ++W +IA + E L +F
Sbjct: 404 DFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVS 463
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M R+ ++P++ TF +++ AC + G + ++KS G++ + +ID+ +
Sbjct: 464 MLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG--SAIIDMYCKC 521
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
G L EAEK+ R+ E W S+++ + + GE AL + ++
Sbjct: 522 GMLVEAEKIHERLE-ERTTVSWNSIISG---FSSEKQGENALSYFSRM 565
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 151/312 (48%), Gaps = 6/312 (1%)
Query: 65 NKIQASALRP-DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ I ++ + P +F + + L I G++ H Q TG V V L+Q Y
Sbjct: 26 HSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCK 85
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + A VFD++ R +V WNTM+ GYA VG++ A+ LF+ M E++V+SW ++++
Sbjct: 86 CLNLNYAFNVFDKMPQR--DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLS 143
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
Y Q ++I +F +M++ ++ D L AC + LG +H Q G ++
Sbjct: 144 CYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDS 203
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V AL+DMY+ K+ A +F M ++ + W+ +IAG + E L ++ M
Sbjct: 204 DVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVML 263
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
+ ++ TF + +C + ELG + + +K+ +G + + +D+ +
Sbjct: 264 DEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGT--ATLDMYAKCDR 321
Query: 363 LQEAEKLLRRMP 374
+ +A K+ P
Sbjct: 322 MVDARKVFNTFP 333
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ +G ++A +F + DV +N+ + Q ++ ++ K++ ++ D +F
Sbjct: 115 AGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFA 174
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VLKA + LG ++HC + G DSDV AL+ MY++CK + A +F E+ R
Sbjct: 175 VVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPER 234
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N W+ ++AGY + D+ E + L++
Sbjct: 235 --NSVCWSAVIAGYVR-------------------------------NDRFTEGLKLYKV 261
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKS 258
M E + + +A +CA L A ELG +H Y +G + IV A +DMYAK
Sbjct: 262 MLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIV--GTATLDMYAKC 319
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
++ A +VF N + + +I G A EAL++F ++++ + +EI+ L
Sbjct: 320 DRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGAL 379
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+AC + G + + + + G++ I ++D+ + G L EA + M + +
Sbjct: 380 TACSAIKGYLEGIQ-LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-D 437
Query: 379 AAIWGSLLAA 388
A W +++AA
Sbjct: 438 AVSWNAIIAA 447
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 250/463 (53%), Gaps = 33/463 (7%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F D +N I A Q N + L+ + S + PD +++ VLKA
Sbjct: 370 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 429
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ G EIH + + + + D V ALI MY+ C
Sbjct: 430 LNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKC--------------------------- 462
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
G + A L + + E+ V+SW +I+G++ Q EA F +M V PD
Sbjct: 463 ------GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 516
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
L CA L VELG+ IH I + L + +++ L+DMY+K G + +FE
Sbjct: 517 TYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKA 576
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
N+ +TW M+ G A HGLG EAL +F M+ VKPN TF+A+L AC H+GLVE G
Sbjct: 577 PNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL 636
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
YF+ M S YG++P++E Y C++D++GR+G + +A +L+ MPFEA+A IW +LL+ I
Sbjct: 637 HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKI 696
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+G+VE+ E A +++LEP +S Y +LSNIYA G WNE K+RK+MR G+KK PGCS
Sbjct: 697 HGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 756
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
+IE+ VH F+ GD +HP +Y+ L + +MK+ ++ +
Sbjct: 757 WIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 799
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 204/444 (45%), Gaps = 48/444 (10%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N L+ +I CS LGF A+ +F + D +N + + A L++ +
Sbjct: 80 TNCLIQMYI-KCSDLGF---AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP 135
Query: 69 ASALRP---------------DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHV 113
+ D +F VLK+ L G +IH V G D DV
Sbjct: 136 GTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVT 195
Query: 114 VAALIQMYASCKCIY--DAR---KVFDEL-------------SLRV---WNVAVWNTMVA 152
+AL+ MYA C C+ D R ++F E+ +L+ +V + +
Sbjct: 196 GSALLDMYAKC-CVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLD 254
Query: 153 GYAKVGDLNN-ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
Y K +L++ + LF + N+ S+ +I GYA+ D+ EA+ +FR +Q + DE+
Sbjct: 255 MYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEV 314
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
++ A ACA + G +H + + + + NA++DMY K G + +A VFE M
Sbjct: 315 SLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM 374
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
++ ++W +IA +G + L +F M ++ ++P+E T+ ++L AC + G
Sbjct: 375 VSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGM 434
Query: 332 RYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
N I+KSR G++ + +ID+ + G +++AEKL R+ E W ++++ +
Sbjct: 435 EIHNRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFS 491
Query: 391 IYGDVELGECALQHLIKL--EPHN 412
+ E + ++++ +P N
Sbjct: 492 LQKQSEEAQKTFSKMLEMGVDPDN 515
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 189/408 (46%), Gaps = 51/408 (12%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C++L SD + +F ++ YN I ++D + A+ ++ +Q S L D S
Sbjct: 259 CNNL--SDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 316
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
+A + G ++H ++ + S++ V A++ MY C + +A VF+E+
Sbjct: 317 SGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 376
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
R + WN ++A + + G+ + ++LF
Sbjct: 377 R--DAVSWNAIIAAHEQNGN-------------------------------EEKTLSLFV 403
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAK 257
M ++PDE + L ACA A+ G IHN I + GL++ V + ALIDMY+K
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYSK 461
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + KA ++ + + ++V++W +I+G +L EA FS+M V P+ T+ I
Sbjct: 462 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 521
Query: 318 LSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
L C ++ VELG++ + I+K + I ++D+ + G +Q+ + + + P
Sbjct: 522 LDTCANLVTVELGKQIHAQIIKKELQSDAYISS--TLVDMYSKCGNMQDFQLIFEKAP-N 578
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQ-----HLIKLEPHNSGNYAIL 419
+ W +++ +G LGE AL+ L ++P+++ A+L
Sbjct: 579 RDFVTWNAMVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVL 623
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 35/277 (12%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID S G + A + ++ V +N I A ++K+ + PD
Sbjct: 455 LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 514
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
N+++ +L L T+ELG++IH Q + L SD ++ + L+ MY+ C + D + +F+
Sbjct: 515 NFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFE 574
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ R + WN MV GYA+ G EA+
Sbjct: 575 KAPNR--DFVTWNAMVCGYAQHG-------------------------------LGEEAL 601
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDM 254
+F MQ+ENVKP+ LA L AC +G VE G + H+ + YGL+ + + ++D+
Sbjct: 602 KIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDI 661
Query: 255 YAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
+SG++ KAL++ E M ++ + W T+++ +HG
Sbjct: 662 MGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHG 698
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 162/389 (41%), Gaps = 56/389 (14%)
Query: 53 QTDNPLNAVIL--YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD 110
Q+ +P + + ++ QA+ + +S F + + G++ H + + T
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIF--QECSDRKALCPGKQAHARMILTEFKPT 76
Query: 111 VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
V V LIQMY C + A KVFD + R + WN M+ GYA GD+ A+ LF+ M
Sbjct: 77 VFVTNCLIQMYIKCSDLGFAFKVFDGMPQR--DTVSWNAMLFGYAGRGDIGVAQKLFDAM 134
Query: 171 -------------------TEKNVISWTTLIAGYAQMDQPNEAIT---LFRRMQVENVKP 208
T + ++ ++ + ++ I L +M +
Sbjct: 135 PGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVV 194
Query: 209 DEIAMLAALSAC-------------------AQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
A+L + C A +GA++L H + + T V +
Sbjct: 195 TGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQL----HGHALKTDFGTDVVIGT 250
Query: 250 ALIDMYAKSGKIGK-ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
A +DMY K + + Q+F ++ N ++ ++ +I G A G EAL MF ++++ +
Sbjct: 251 ATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLG 310
Query: 309 PNEITFIAILSACCHV-GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
+E++ AC + G +E + + MKS + I ++D+ G+ G L EA
Sbjct: 311 LDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEAC 368
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ M +A W +++AA G+ E
Sbjct: 369 LVFEEM-VSRDAVSWNAIIAAHEQNGNEE 396
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 257/419 (61%), Gaps = 37/419 (8%)
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
++ + LG IH + +G S ++V +L+ +YA+C
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC------------------------ 36
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M + +KP
Sbjct: 37 ---------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 87
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D +++ LSACA++GA+ LG+ +H Y+ + GL + +N L+D+YA+ G++ +A +F
Sbjct: 88 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHVGLV 327
+ M +K+ ++WT++I GLA++G G+EA+++F ME + P EITF+ IL AC H G+V
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 207
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YF M+ Y IEP+IE +GCM+DLL RAG +++A + ++ MP + N IW +LL
Sbjct: 208 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 267
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GVKK+
Sbjct: 268 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 327
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLESD 503
PG S +EV RVHEF+ GD SHP D +Y L ++ G+++ + + N + V E +
Sbjct: 328 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
AY +F + D+ +N+ I + P A+ LY ++ + ++PD ++ +L A K
Sbjct: 42 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 101
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ + LG+ +H + GL ++H L+ +YA C + +A+ +FDE
Sbjct: 102 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE------------ 149
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ-VENVK 207
M +KN +SWT+LI G A EAI LF+ M+ E +
Sbjct: 150 ---------------------MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 188
Query: 208 PDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
P EI + L AC+ G V+ G E+ E+Y + + ++D+ A++G++ KA +
Sbjct: 189 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 248
Query: 267 VFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
++M +V+ W T++ +H G L F+R++ +++PN +LS
Sbjct: 249 YIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNHSGDYVLLS 300
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 247/463 (53%), Gaps = 33/463 (7%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+ A S+F DV + + A + + L+ ++Q + PD ++ L
Sbjct: 589 EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ +T+ LG+ IH GL++D+ V AL+ MY++C
Sbjct: 649 LDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNC---------------------- 686
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
GD A + FE M ++++SW + A YAQ EA+ LFR MQ+E V
Sbjct: 687 -----------GDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGV 735
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KPD++ L+ V G+ H + GL++ V + L+ +YAK GK+ +A+
Sbjct: 736 KPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAIS 795
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F +V+ +I LA HG EA+ MF +M++ V+P+ T ++I+SAC H G+
Sbjct: 796 LFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGM 855
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G F MK +GI P +E Y C +DLLGRAG L+ AE+++R+MPFE N +W SLL
Sbjct: 856 VEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+ GD ELGE Q +++L+PHNS + +LSNIY G+W ++ RK + D VK
Sbjct: 916 GTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKN 975
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
PG S++E+ K+VHEFVAGD SHP D +Y +L K+ M+ A
Sbjct: 976 APGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRA 1018
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 132/259 (50%), Gaps = 6/259 (2%)
Query: 116 ALIQMYASCKCIYDA---RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
+ + +SC C +A R E R + + +++ + + +L AR++F+ M
Sbjct: 543 SFTSVLSSCYCSQEAQVLRMCILESGYR--SACLETALISMHGRCRELEQARSVFDEMDH 600
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
+V+SWT +++ A+ E LFRRMQ+E V PD+ + L C + LG+ I
Sbjct: 601 GDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKII 660
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H + + GL + + NAL++MY+ G +AL FE MK + +++W M A A GL
Sbjct: 661 HACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLA 720
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
+EA+ +F M+ VKP+++TF L+ LV G + F+ + + G++ +
Sbjct: 721 KEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATG 779
Query: 353 MIDLLGRAGYLQEAEKLLR 371
++ L + G L EA L R
Sbjct: 780 LVKLYAKCGKLDEAISLFR 798
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 176/391 (45%), Gaps = 39/391 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+Q+ L + I+ G + A++IF+ + +V + I A Q+ A L+
Sbjct: 55 GLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALF 114
Query: 65 NK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ S+ P++Y+ +L A + +GR IH GL+ + A L+
Sbjct: 115 RTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERE-STTATLVG---- 169
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
N M+ YAK G +A A+F + EK+V+SWT +
Sbjct: 170 ------------------------NAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAG 205
Query: 184 GYAQMDQ--PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
YAQ + P+ A+ +FR M ++ + P+ I + AL AC L G W+H+ + + GL
Sbjct: 206 AYAQERRFYPD-ALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAGL 261
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNK---SVITWTTMIAGLALHGLGREALDM 298
NALI+MY K G A VF+ M ++ +++W MI+ G +A+ +
Sbjct: 262 GFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F R+ ++PN +T I IL+A G+ R F+ G + +I +
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYA 381
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
+ G+ A + RR+ ++ + W ++L AS
Sbjct: 382 KCGFFSAAWTVFRRIRWKCDVISWNTMLGAS 412
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 143/301 (47%), Gaps = 19/301 (6%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NV 206
N ++ Y + G L A A+F M E+NV+SWT LI+ AQ A LFR M +E +
Sbjct: 64 NCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSA 123
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL----NTIVPLNNALIDMYAKSGKIG 262
P+ ++A L+ACA + +G IH I + GL T + NA+I+MYAK G
Sbjct: 124 APNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPE 183
Query: 263 KALQVFENMKNKSVITWTTMIAGLALH-GLGREALDMFSRMERARVKPNEITFIAILSAC 321
A+ VF + K V++WT M A +AL +F M + PN ITFI L AC
Sbjct: 184 DAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC 243
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF--EANA 379
L + + + ++ G +P +I++ G+ G + A + + M E +
Sbjct: 244 --TSLRDGTWLHSLLHEAGLGFDPLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDL 299
Query: 380 AIWGSLLAAS---NIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
W ++++AS +GD A+ ++LE + +++ + A+ + G R
Sbjct: 300 VSWNAMISASVEAGRHGDA----MAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355
Query: 437 K 437
K
Sbjct: 356 K 356
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 144/352 (40%), Gaps = 38/352 (10%)
Query: 24 GFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFV 82
GF A+++F + K DV +NT + A + V ++ + + + P+ SF +
Sbjct: 384 GFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAI 443
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLD-SDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
L A ++ GR+IH + D + V L+ MY C I +A VF E+ L
Sbjct: 444 LNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPS 503
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
++ WN M+ YAQ D+ EA M
Sbjct: 504 RSLVTWNVML-------------------------------GAYAQNDRSKEAFGALMEM 532
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
V PD ++ + LS+C + + + I + G + L ALI M+ + ++
Sbjct: 533 LQGGVLPDALSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC-LETALISMHGRCREL 588
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A VF+ M + V++WT M++ A + +E +F RM+ V P++ T L C
Sbjct: 589 EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
+ LG + + + G+E I ++++ G +EA M
Sbjct: 649 LDSTTLGLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 167/377 (44%), Gaps = 63/377 (16%)
Query: 29 AYSIF---THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
AY +F + + D+ +N I A + +A+ ++ +++ +RP++ + +L A
Sbjct: 284 AYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNA 343
Query: 86 VVKLSTIELG--REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ S ++ G R+ H + +G DV V A+I M
Sbjct: 344 LAA-SGVDFGAARKFHGRIWESGYLRDVVVGNAIISM----------------------- 379
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEK-NVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
YAK G + A +F + K +VISW T++ + + F M
Sbjct: 380 ----------YAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML 429
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYI----EQYGLNTIVPLNNALIDMYAKS 258
+ + P++++ +A L+AC+ A++ G IH+ I Y +++ + L+ MY K
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM---LVSMYGKC 486
Query: 259 GKIGKALQVFENM--KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
G I +A VF+ M ++S++TW M+ A + +EA M + V P+ ++F +
Sbjct: 487 GSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTS 546
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC----MIDLLGRAGYLQEAEKLLRR 372
+LS+C ++ R I++S Y + C +I + GR L++A +
Sbjct: 547 VLSSCYCSQEAQVLR--MCILESGY-------RSACLETALISMHGRCRELEQARSVFDE 597
Query: 373 MPFEANAAIWGSLLAAS 389
M + W ++++A+
Sbjct: 598 MD-HGDVVSWTAMVSAT 613
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 119/288 (41%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ + + + ++ S+ G A S F D+ +N A Q AV+L+
Sbjct: 668 GLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLF 727
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q ++PD +F L + + G+ H +GLDSDV V L+++YA C
Sbjct: 728 RHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKC 787
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G L+ A +LF + V+ +I
Sbjct: 788 ---------------------------------GKLDEAISLFRGACQWTVVLLNAIIGA 814
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
AQ EA+ +F +MQ E V+PD +++ +SAC G VE G E +G++
Sbjct: 815 LAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISP 874
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ +D+ ++G++ A Q+ M + + WT+++ L G
Sbjct: 875 TLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
A L +C + G+ H I GL + L N LI+MY + G + +A +F M+ +
Sbjct: 30 ALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRY 333
+V++WT +I+ A G A +F M + PN T +A+L+AC + + +GR
Sbjct: 90 NVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS- 148
Query: 334 FNIMKSRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ M G+E + MI++ + G ++A + +P E + W ++ A
Sbjct: 149 IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP-EKDVVSWTAMAGA 206
>gi|357140545|ref|XP_003571826.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Brachypodium distachyon]
Length = 489
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 259/424 (61%), Gaps = 10/424 (2%)
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL-DSDVHVVAALIQMYASCKCIYDARK 132
P + +FPF+ +A +L++ L +H + GL D+H+ + + MYA+C AR+
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHSHPLRLGLLPCDLHIANSFVHMYAACALPDLARR 117
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FDE+ N WN ++ GYAK DL+ AR +F+ M ++V+SW+ +I G + +
Sbjct: 118 LFDEIPRP--NPVSWNALLDGYAKCRDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYR 175
Query: 193 EAITLFRRMQV----ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
EA+ LF M+ V+ +++ M++ L ACA LG + G +H Y+++ G + L
Sbjct: 176 EALALFEMMEAAATGHGVRANDVTMISMLGACAHLGDLRRGRQMHRYLQERGFLLNLRLA 235
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKS--VITWTTMIAGLALHGLGREALDMFSRMERAR 306
+L+DMYAK G I +AL+VF + S V+ W MI GLA+HG+G E +++F M+ +
Sbjct: 236 TSLVDMYAKCGAISEALEVFRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSG 295
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V P+EIT++ +LSAC H GLV+ R+F ++++ G+ P +E Y C++D+L RAG L+EA
Sbjct: 296 VVPDEITYLGLLSACVHGGLVDEAWRFFCSLEAQ-GLRPHVEHYACLVDVLSRAGRLEEA 354
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+++ MP E + ++ G++L A +++G VELGE + L++L+P + G Y LSNIYA+
Sbjct: 355 YGVVKSMPMEPSVSVLGAILNACHLHGWVELGEVVGRQLVRLQPDHDGRYIGLSNIYAVA 414
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
RW E+ K RKVM + G+KK+PG S I+V R F+A D +H +Y +L I M
Sbjct: 415 KRWQEAKKARKVMSERGLKKIPGFSEIDVGGRPCRFIAQDKTHSGSTDIYALLDLIAMDM 474
Query: 487 KFAE 490
K +
Sbjct: 475 KMKD 478
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 270/467 (57%), Gaps = 10/467 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQT-----DNPLNAVILYNK-IQASALRPDNYSFPF 81
YA +F P+V+LY+ + A ++ +++ L+ + ++ P+ + +P
Sbjct: 61 YARRLFDATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPL 120
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL+A + ++L R IHC G + +L+ Y+ + DARK+FD L+ R
Sbjct: 121 VLRAACAIG-VQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDR- 178
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
NV W +V+GYA+ G + +A LFE M +++V +W +IAG Q EA+ +FRRM
Sbjct: 179 -NVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRM 237
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E +P+ + LSAC LG +++G+ IH Y + + + N LIDMY K G +
Sbjct: 238 VDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNL 297
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A +F+ ++ + TW ++I LALHG A+ +F+ M V+P+E+TF+ +L+AC
Sbjct: 298 MEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNAC 357
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H G V+ G RYF +M +GIEP+IE YGC++DLL RAG Q+A + M + + I
Sbjct: 358 THGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVI 417
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR- 440
WGSLL A I+ +EL E A+++L+ L P N+ +L+N+Y+ G W E K+RK+M+
Sbjct: 418 WGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKE 477
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
D+ KK+PGCS+IEV ++ F +GD HP+ + +Y L K+ M+
Sbjct: 478 DVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLATTME 524
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 272/486 (55%), Gaps = 5/486 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTD-NPLNAVIL 63
G+ Q L + ++ G + +A +F D + + + AL Q + + +
Sbjct: 33 GIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVF 92
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ +S LRPD++ F ++KA L +I+ GR++HC + + +D V ++L+ MYA
Sbjct: 93 SSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAK 152
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + A+ VFD S+RV N W MV+GYAK G A LF ++ KN+ SWT LI+
Sbjct: 153 CGLLNSAKAVFD--SIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALIS 210
Query: 184 GYAQMDQPNEAITLFRRMQVENVKP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
G+ Q + EA ++F M+ E V D + + + + ACA L A G +H + G +
Sbjct: 211 GFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD 270
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ V ++NALIDMYAK + A +F M+++ V++WT++I G+A HG +AL ++ M
Sbjct: 271 SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM 330
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
VKPNE+TF+ ++ AC HVG VE GR F M YGI P ++ Y C++DLLGR+G
Sbjct: 331 VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGL 390
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI-KLEPHNSGNYAILSN 421
L EAE L+ MPF + W +LL+A G ++G HL+ + + Y +LSN
Sbjct: 391 LDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSN 450
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
IYA W + + R+ + +M V+K PG S +EV K F AG+TSHP + ++++L K
Sbjct: 451 IYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKK 510
Query: 482 INGQMK 487
+ +M+
Sbjct: 511 LEEEMR 516
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
L L CA+ + + +H +I + G+ PL N L+++Y K G ALQVF+ M +
Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 274 KSVITWTTMIAGLALHGL-GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+ I W +++ L L G+ S + ++P++ F A++ AC ++G ++ GR+
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 333 -YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + + S Y + ++ ++D+ + G L A+ + + + N W ++++
Sbjct: 127 VHCHFIVSEYANDEVVKS--SLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG 180
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 270/518 (52%), Gaps = 82/518 (15%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
+V+ YN I + Y ++++ + PD ++FP V++A + + R+IH
Sbjct: 41 NVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEV---RKIH 97
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG- 158
GL+ +V V +AL+ Y DA KVF+EL R +V +WN M+ GY K+G
Sbjct: 98 GCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPER--DVVLWNAMINGYTKIGH 155
Query: 159 ----------------------------------DLNNARAL------------------ 166
D+NN RA+
Sbjct: 156 LNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNA 215
Query: 167 -----------------FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
FE++ EK++ SW ++I+ + Q D + + LF +M V PD
Sbjct: 216 LIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPD 275
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT-----IVPLNNALIDMYAKSGKIGKA 264
I + A L AC+ L A+ G IH Y+ GL V LNNA++DMYAK G + A
Sbjct: 276 VITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNA 335
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+F+ M+NK V +W MI G A+HG G EALDMF RM A++KP+ +TF+ +LSAC H
Sbjct: 336 DIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHA 395
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G V GR + M+ +G+ P IE Y C+ID+LGRAG+L EA L +R+P E N +W +
Sbjct: 396 GFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMA 455
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHN--SGNYAILSNIYAILGRWNESGKIRKVMRDM 442
LL A ++G+ ELG + + +LEP + SG+Y ++S++Y ++GR+ E+ ++R+ M++
Sbjct: 456 LLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQ 515
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILC 480
VKK PGCS+IE+ ++ F GD +H + + L LC
Sbjct: 516 NVKKTPGCSWIELKDGLYVFSMGDRTHHELNALINCLC 553
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 148 NTMVAGYAKVGDLNNARALF-ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
+++ Y++ + A +F + E+NV ++ +IAG+ + ++RM+ V
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
PD+ + AC + V IH + + GL V + +AL++ Y K A +
Sbjct: 74 MPDKFTFPCVVRACCEFMEVR---KIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEK 130
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VFE + + V+ W MI G G +A+ +F RM + + T +ILS +G
Sbjct: 131 VFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGD 190
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ GR I+ ++ G + +ID+ G+ + ++A ++ M E + W S++
Sbjct: 191 INNGRAIHGIV-TKMGYSSCVAVSNALIDMYGKCKHTEDA-LMIFEMINEKDLFSWNSII 248
Query: 387 AA 388
+A
Sbjct: 249 SA 250
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 267/481 (55%), Gaps = 35/481 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN-PLN 59
+IV G ++ LL++ ++ + G Y IF PD +L+ + IK+ ++ N +
Sbjct: 35 IIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIY 94
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
++ Y+++ S + P NY+F V+K+ LS ++ GR +H + G DV+V AAL+
Sbjct: 95 SLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVA 154
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+Y K GDL NAR +F+ + E+++++W
Sbjct: 155 LYG---------------------------------KCGDLINARKVFDKIRERSIVAWN 181
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++I+GY Q EAI LF RM+ V+PD ++ LSACA LGA LG W+H YI
Sbjct: 182 SMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGN 241
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL+ V L +LI+MY + G + KA +VF++MK ++V+ WT MI+G +G G +A+++F
Sbjct: 242 GLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELF 301
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M R + PN ITF+A+LSAC H GLV GRR F ++ Y + P +E C++D+LGR
Sbjct: 302 HEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGR 361
Query: 360 AGYLQEAEKLLR-RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
AG L EA ++ +P AI ++L A ++ + +LG +HL+ EP N +Y I
Sbjct: 362 AGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVI 421
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNIYA+ GR ++ +R M +KK G S +EV ++ + F GD SH + + +Y
Sbjct: 422 LSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHY 481
Query: 479 L 479
L
Sbjct: 482 L 482
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/402 (41%), Positives = 240/402 (59%), Gaps = 30/402 (7%)
Query: 108 DSDVHVVAALIQMYASCKCIYDARKVFD---ELSLRVWNVAV------------------ 146
D +V A++ + +C + AR++FD + + +WNV V
Sbjct: 22 DKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYIELGDMVAARELFDR 81
Query: 147 --------WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
WNT+++GYA G++ +FE M +NV SW LI GY + EA+ F
Sbjct: 82 MPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECF 141
Query: 199 RRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
+RM V+ V P++ ++A LSAC++LG +E+G+W+H Y + G + + NALIDMYAK
Sbjct: 142 KRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAK 201
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G I KAL VF+ + K +ITW T+I LA+H +AL +F M+RA +P+ +TF+ I
Sbjct: 202 CGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGI 261
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
LSAC H+GLV G +F M Y I P+IE YGCM+DLLGRAG + +A ++R+MP E
Sbjct: 262 LSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEP 321
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
+ IW +LL A Y +VE+ E ALQ LI+LEP+N GN+ +LSNIY LGR + +++
Sbjct: 322 DVVIWAALLGACRXYKNVEMAELALQRLIELEPNNPGNFVMLSNIYKDLGRSQDVARLKV 381
Query: 438 VMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
MRD G +K+PGCS I + V EF + D HP+ D +Y+ L
Sbjct: 382 AMRDTGFRKVPGCSVIGCNDSVVEFYSLDERHPETDSIYRAL 423
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 43/241 (17%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ DA KVF E+ R NV W +VA + D+ +AR LF+L + +V+ W +++GY
Sbjct: 10 VADAYKVFAEM--RDKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYI 67
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
++ A LF RM PD ++ W
Sbjct: 68 ELGDMVAARELFDRM------PD----------------CDVMSW--------------- 90
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERA 305
N ++ YA +G++ ++VFE M ++V +W +I G +GL +EAL+ F RM
Sbjct: 91 --NTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDG 148
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
V PN+ T +A+LSAC +G +E+G ++ ++ G + + +ID+ + G +++
Sbjct: 149 VVVPNDYTVVAVLSACSRLGDLEIG-KWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEK 207
Query: 366 A 366
A
Sbjct: 208 A 208
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 38/257 (14%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR-PDNYSFPFVLKAVVKLS 90
+F +VY +N I + A+ + ++ + P++Y+ VL A +L
Sbjct: 109 VFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLG 168
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
+E+G+ +H G ++ V ALI MYA C I A VFD L ++ ++ WN
Sbjct: 169 DLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVK--DIITWN-- 224
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
T+I A +A++LF M+ +PD
Sbjct: 225 -----------------------------TIINSLAMHXHAADALSLFEGMKRAGERPDG 255
Query: 211 IAMLAALSACAQLGAVELGEWIH--NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + LSAC +G V G ++H + ++ Y + + ++D+ ++G I +A+ +
Sbjct: 256 VTFVGILSACTHMGLVRNG-FLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIV 314
Query: 269 ENMK-NKSVITWTTMIA 284
M V+ W ++
Sbjct: 315 RKMPMEPDVVIWAALLG 331
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 266/493 (53%), Gaps = 44/493 (8%)
Query: 12 LLSRFIDSCSSLGFSD----YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNA-----V 61
L++R + C+ G YA +F ++P D YNT ++ ++ + ++ V
Sbjct: 59 LVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAV 118
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
++ ++ + PD Y+F +LKA E GR+ H V G +V LI MY
Sbjct: 119 RVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMY 178
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C GD AR F V+S+ +
Sbjct: 179 AEC---------------------------------GDARAARVTFGRADGDCVVSYNAM 205
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
IA + +P EA+ LFR MQ + + P + +++ LSACA LGA++LG W+H+Y+ + GL
Sbjct: 206 IAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGL 265
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
++V ++ AL+DMYAK G + A+ VF+ M+++ W+ MI A HG GREA+ +F
Sbjct: 266 GSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEE 325
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M++ +KP++ITF+ +L AC H GLV G RYF+ MK +GI P I+ YGC+ DLL R+G
Sbjct: 326 MKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKD-HGIVPGIKHYGCVTDLLARSG 384
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L+ A K + +P +W +LL+A +GDVELG+ + +++L+ + G+Y I SN
Sbjct: 385 QLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSN 444
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+ A G W E ++RK+M D GV K+PGCS IE+ VHEF AGD HP +++ +
Sbjct: 445 LCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDE 504
Query: 482 INGQMKFAEHLQN 494
+ Q+K ++ +
Sbjct: 505 VIDQLKLVGYIPD 517
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 270/467 (57%), Gaps = 35/467 (7%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
SLG +A F+ P +N I+ Q+ NP NA Y + + + + D + F
Sbjct: 51 SLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSF 110
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VLKA ++ +IH V G +D + L+ +YA
Sbjct: 111 VLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYA------------------- 151
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
KVG++++A +F+ M ++++ SW LI+G+AQ +P EA++LF+RM
Sbjct: 152 --------------KVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRM 197
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
+++ KP+EI++L ALSACAQLG + GE IH YI+ + + N +IDMYAK G +
Sbjct: 198 EIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFV 257
Query: 262 GKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
KA VFE+M K ++TW TMI A+HG G +AL++F +M+++ V P++++++A+L A
Sbjct: 258 DKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCA 317
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H GLVE G R FN M++ G++P ++ YG ++DLLGRAG L EA ++ MP +
Sbjct: 318 CNHGGLVEEGFRLFNSMEN-CGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIV 376
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+W +LL AS + +VE+ E + L+++ ++ G++ +LSN+YA RW + G++R+ M+
Sbjct: 377 LWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMK 436
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ VKK+PG SYIE + +H+F D SH + +Y L +I ++K
Sbjct: 437 NRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVK 483
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 33/290 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ +G + L + +D + +G D A +F K D+ +N I Q P A
Sbjct: 131 IVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEA 190
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ +++ +P+ S L A +L + G +IH D + V +I M
Sbjct: 191 LSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDM 250
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A VF+ +S R ++ WNTM+ +A G+ A LFE
Sbjct: 251 YAKCGFVDKAYLVFESMSCRK-DIVTWNTMIMAFAMHGEGCKALELFE------------ 297
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+MDQ V PD+++ LA L AC G VE G + N +E G
Sbjct: 298 ------KMDQ-------------SGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCG 338
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALH 289
+ V +++D+ ++G++ +A + +M ++ W T++ H
Sbjct: 339 VKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTH 388
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 266/481 (55%), Gaps = 42/481 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHK------SKPDVYLYNTTIKALCQTDNPL 58
G+D N + + ID S G A SIF + P +N I ++
Sbjct: 302 GVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAP----WNAMISGYLRSGFNE 357
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A+ L+ K+ + + D+Y++ V A+ L + LG+++H + + +GL+
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLE---------- 407
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
V V++ N + YAK G L + R +F M ++++ISW
Sbjct: 408 ----------------------VNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISW 445
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T+L+ Y+Q + ++AI +F M+ E + P++ + L +CA L +E G+ +H I +
Sbjct: 446 TSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICK 505
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL+ + +AL+DMYAK G +G A +VF + N ++WT +IAG A HG+ +AL +
Sbjct: 506 VGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQL 565
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F RM + V+PN +TF+ +L AC H GLVE G +YF +MK YG+ P++E Y C++DLL
Sbjct: 566 FRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLS 625
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G+L +A + + RMP E N +W +LL A ++G+VELGE A Q ++ + NS Y +
Sbjct: 626 RVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVL 685
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSN Y G + + +R +M++ GVKK PGCS+I V+ +H+F AGD HP+ D++Y
Sbjct: 686 LSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAK 745
Query: 479 L 479
L
Sbjct: 746 L 746
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 196/414 (47%), Gaps = 36/414 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+++RG + + + ++ + L + +Y +F ++ +V +N I D L+A
Sbjct: 197 IVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDA 256
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L+ ++ + PD +F V KA+ L + +E+ + G+DS+ V ALI M
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
+ C + +AR +F+ + A WN M++GY + G EK
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG-----------FNEK------- 358
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
A+ LF +M ++ D + +A A L + LG+ +H + G
Sbjct: 359 -------------ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSG 405
Query: 241 LNT-IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
L V ++NA+ + YAK G + +VF M+++ +I+WT+++ + +A+++F
Sbjct: 406 LEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIF 465
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
S M + PN+ TF ++L +C ++ L+E G++ I+ + G++ ++D+ +
Sbjct: 466 SNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGII-CKVGLDMDKCIESALVDMYAK 524
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL--EPH 411
G L +A+K+ R+ A+ W +++A +G V+ + +++L EP+
Sbjct: 525 CGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
++ + N + Y+K D++ A LF+ M+++N SWT LIAG A+ + F MQ
Sbjct: 104 SLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQ 163
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ + PD+ A L C L ++ELG +H I G + ++ AL++MYAK +I
Sbjct: 164 SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIE 223
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+ +VF M +V++W MI G + L +A D+F RM V P+ TFI + A
Sbjct: 224 DSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA-- 281
Query: 323 HVGLVELGRRYFNIMK--SRYGIEPKIEQY----GCMIDLLGRAGYLQEAEKLLR----- 371
+G++ R N K S Y +E ++ +ID+ + G LQEA +
Sbjct: 282 -IGML----RDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFIT 336
Query: 372 -RMPFEANAAIWGSLLAASN 390
R NA I G L + N
Sbjct: 337 CRFNAPWNAMISGYLRSGFN 356
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 255/425 (60%), Gaps = 7/425 (1%)
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGR----EIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+A P++ + VL A S+ L R +H V ++ + L + Y + +
Sbjct: 62 AAPPPNDVTLLTVLSACAGDSSSALARPLALSLHALAVKL-FPCNLLLCTCLARFYLASR 120
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ A K+FD + R +V +NTM+ G + G + AR +F+ M + +SWT LI G
Sbjct: 121 LPHLAIKLFDSMPDR--SVVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGC 178
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
+ + +EAI F M + V+PD + ++AA+SACA++GA+ LG W+H ++ L V
Sbjct: 179 VKNGRHDEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNV 238
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
+ N+LIDMYA+ G++ A QVF ++ ++V++W +MI G A +G +A++ F M R
Sbjct: 239 RVANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRRE 298
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
KP+ +TF +L+AC H GL + G RY++ M++ +GI ++E YGC++DLLGRAG L E
Sbjct: 299 GFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLGE 358
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A +++ MP N + G+LLA ++GDV+L E +QHL++ +P NY +LSNIYA
Sbjct: 359 AMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIYAA 418
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
+G+W +GK+R +M+ GVKK PG S +E+ VHEFV GD SHP ++++L + +
Sbjct: 419 VGKWGGAGKVRSLMKSRGVKKRPGQSTVEIDGEVHEFVCGDRSHPQAREVFEVLGLLTHE 478
Query: 486 MKFAE 490
M E
Sbjct: 479 MAGCE 483
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 35/269 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G A +F PD + I + A+ ++ + + PD + +
Sbjct: 151 GLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYVTLVAAI 210
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A ++ + LG +H V L+ +V V +LI MYA C + AR+VF + R
Sbjct: 211 SACAEVGALGLGMWVHRFVVDKRLEHNVRVANSLIDMYARCGQVDFARQVFGRIRKR--T 268
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
V WN+M+ G+A G Q +A+ F M+
Sbjct: 269 VVSWNSMIVGFAANG-------------------------------QYADAVEHFEAMRR 297
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMYAKSGKIG 262
E KPD + L+AC+ G + G ++ + ++G+ + ++D+ ++G++G
Sbjct: 298 EGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLG 357
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALHG 290
+A++V E+M + + + ++AG +HG
Sbjct: 358 EAMRVVESMPMRPNEVVLGALLAGCRMHG 386
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 12/261 (4%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELM------TEKNVISWTTLIAGYAQMDQPNEAIT 196
+V W + +A A+ GDL A A M N ++ T+++ A A
Sbjct: 30 DVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLSACAGDSSSALARP 89
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
L + VK +L A L + ++V N +I
Sbjct: 90 LALSLHALAVKLFPCNLLLCTCLARFYLASRLPHLAIKLFDSMPDRSVVTYNT-MITGLM 148
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
++G + A +VF+ M ++WT +I G +G EA+D F M R V+P+ +T +A
Sbjct: 149 RNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYVTLVA 208
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+SAC VG + LG + + +E + +ID+ R G + A ++ R+ +
Sbjct: 209 AISACAEVGALGLGMWVHRFVVDKR-LEHNVRVANSLIDMYARCGQVDFARQVFGRI-RK 266
Query: 377 ANAAIWGSLL---AASNIYGD 394
W S++ AA+ Y D
Sbjct: 267 RTVVSWNSMIVGFAANGQYAD 287
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 259/428 (60%), Gaps = 3/428 (0%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+ I Q +V L+N+++A + D ++ ++ + LGR++H +
Sbjct: 359 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 418
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
+G V V +LI MYA C + A +F ++ + ++ W +M+ Y++VG++ A
Sbjct: 419 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK--DIVSWTSMITAYSQVGNVAKA 476
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQ 222
R F+ M+EKNVI+W ++ Y Q + + +++ M E V+PD + + CA
Sbjct: 477 REFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCAD 536
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
LGA +LG+ I + GL + NA+I MY+K G+I +A +VF+ + K +++W M
Sbjct: 537 LGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAM 596
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I G + HG+G++A+++F + + KP+ I+++A+LS C H GLV+ G+ YF++MK +
Sbjct: 597 ITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHN 656
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
I P +E + CM+DLLGRAG+L EA+ L+ MP + A +WG+LL+A I+G+ EL E A
Sbjct: 657 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAA 716
Query: 403 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEF 462
+H+ +L+ +SG+Y +++ IYA G+ ++S +IRK+MRD G+KK PG S++EV +VH F
Sbjct: 717 KHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVF 776
Query: 463 VAGDTSHP 470
A D SHP
Sbjct: 777 KADDVSHP 784
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 187/377 (49%), Gaps = 7/377 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR-PDNYSF 79
+ LG A +F DV +NT + Q+ L ++ + + S P+ ++
Sbjct: 102 AKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTL 161
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
+K+ L L ++ D V AAL+ M+ C + A ++F + +
Sbjct: 162 ACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF--VRI 219
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ + N+M+AGY K +++A LF+ M E++V+SW +++ +Q + EA+ +
Sbjct: 220 KEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVV 279
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKS 258
MQ + V+ D ++L+ACA+L ++ G+ +H + + L I P + +AL+++YAKS
Sbjct: 280 DMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPHIDPYVASALVELYAKS 338
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G +A VF ++ +++ + WT +I+G +G E++++F++M + ++ ++
Sbjct: 339 GCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLI 398
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
S CC + LGR+ ++ I+ + +I + + LQ AE + R M E +
Sbjct: 399 SGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMN-EKD 456
Query: 379 AAIWGSLLAASNIYGDV 395
W S++ A + G+V
Sbjct: 457 IVSWTSMITAYSQVGNV 473
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 154/328 (46%), Gaps = 37/328 (11%)
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + V GL S V + L+ Y SC + DAR++ + + NV N M+ GYAK+G
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLL-LMDIAHPNVITHNVMLNGYAKLG 105
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAAL 217
L++A LF M ++V SW TL++GY Q Q ++ F M + P+ + A+
Sbjct: 106 RLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 165
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK----------------- 260
+C LG L + ++++ + AL+DM+ + G
Sbjct: 166 KSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 225
Query: 261 --------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ AL++F++M + V++W M++ L+ G REALDM M+
Sbjct: 226 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 285
Query: 307 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
V+ + T+ + L+AC + + G++ + ++++ I+P + +++L ++G +E
Sbjct: 286 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS--ALVELYAKSGCFKE 343
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYG 393
A+ + + N A W L++ YG
Sbjct: 344 AKGVFNSLHDRNNVA-WTVLISGFLQYG 370
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 270/467 (57%), Gaps = 10/467 (2%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQT-----DNPLNAVILYNK-IQASALRPDNYSFPF 81
YA +F P+V+LY+ + A ++ +++ L+ + ++ P+ + +P
Sbjct: 279 YARRLFDATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPL 338
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL+A + ++L R IHC G + +L+ Y+ + DARK+FD L+ R
Sbjct: 339 VLRAACAIG-VQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDR- 396
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
NV W +V+GYA+ G + +A LFE M +++V +W +IAG Q EA+ +FRRM
Sbjct: 397 -NVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRM 455
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
E +P+ + LSAC LG +++G+ IH Y + + + N LIDMY K G +
Sbjct: 456 VDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNL 515
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+A +F+ ++ + TW ++I LALHG A+ +F+ M V+P+E+TF+ +L+AC
Sbjct: 516 MEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNAC 575
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H G V+ G RYF +M +GIEP+IE YGC++DLL RAG Q+A + M + + I
Sbjct: 576 THGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVI 635
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR- 440
WGSLL A I+ +EL E A+++L+ L P N+ +L+N+Y+ G W E K+RK+M+
Sbjct: 636 WGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKE 695
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
D+ KK+PGCS+IEV ++ F +GD HP+ + +Y L K+ M+
Sbjct: 696 DVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLATTME 742
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 259/428 (60%), Gaps = 3/428 (0%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+ I Q +V L+N+++A + D ++ ++ + LGR++H +
Sbjct: 339 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 398
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
+G V V +LI MYA C + A +F ++ + ++ W +M+ Y++VG++ A
Sbjct: 399 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK--DIVSWTSMITAYSQVGNVAKA 456
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQ 222
R F+ M+EKNVI+W ++ Y Q + + +++ M E V+PD + + CA
Sbjct: 457 REFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCAD 516
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
LGA +LG+ I + GL + NA+I MY+K G+I +A +VF+ + K +++W M
Sbjct: 517 LGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAM 576
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I G + HG+G++A+++F + + KP+ I+++A+LS C H GLV+ G+ YF++MK +
Sbjct: 577 ITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHN 636
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
I P +E + CM+DLLGRAG+L EA+ L+ MP + A +WG+LL+A I+G+ EL E A
Sbjct: 637 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAA 696
Query: 403 QHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEF 462
+H+ +L+ +SG+Y +++ IYA G+ ++S +IRK+MRD G+KK PG S++EV +VH F
Sbjct: 697 KHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVF 756
Query: 463 VAGDTSHP 470
A D SHP
Sbjct: 757 KADDVSHP 764
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 187/377 (49%), Gaps = 7/377 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR-PDNYSF 79
+ LG A +F DV +NT + Q+ L ++ + + S P+ ++
Sbjct: 82 AKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTL 141
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
+K+ L L ++ D V AAL+ M+ C + A ++F + +
Sbjct: 142 ACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF--VRI 199
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ + N+M+AGY K +++A LF+ M E++V+SW +++ +Q + EA+ +
Sbjct: 200 KEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVV 259
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKS 258
MQ + V+ D ++L+ACA+L ++ G+ +H + + L I P + +AL+++YAKS
Sbjct: 260 DMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPHIDPYVASALVELYAKS 318
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G +A VF ++ +++ + WT +I+G +G E++++F++M + ++ ++
Sbjct: 319 GCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLI 378
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
S CC + LGR+ ++ I+ + +I + + LQ AE + R M E +
Sbjct: 379 SGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMN-EKD 436
Query: 379 AAIWGSLLAASNIYGDV 395
W S++ A + G+V
Sbjct: 437 IVSWTSMITAYSQVGNV 453
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 154/328 (46%), Gaps = 37/328 (11%)
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + V GL S V + L+ Y SC + DAR++ + + NV N M+ GYAK+G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLL-LMDIAHPNVITHNVMLNGYAKLG 85
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAAL 217
L++A LF M ++V SW TL++GY Q Q ++ F M + P+ + A+
Sbjct: 86 RLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 145
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK----------------- 260
+C LG L + ++++ + AL+DM+ + G
Sbjct: 146 KSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 205
Query: 261 --------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ AL++F++M + V++W M++ L+ G REALDM M+
Sbjct: 206 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265
Query: 307 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
V+ + T+ + L+AC + + G++ + ++++ I+P + +++L ++G +E
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS--ALVELYAKSGCFKE 323
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYG 393
A+ + + N A W L++ YG
Sbjct: 324 AKGVFNSLHDRNNVA-WTVLISGFLQYG 350
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 273/476 (57%), Gaps = 35/476 (7%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
LL+ ++ + G + A +F D+ + I Q+ A+ L+ K+
Sbjct: 142 LLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLG 201
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
+P+ ++ +LKA + GR++H ++ G D +VHV ++L+ MYA
Sbjct: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYAR-------- 253
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
W M A+ +F + KNV+SW LIAG+A+ +
Sbjct: 254 ---------------WAHM----------REAKVIFNSLAAKNVVSWNALIAGHARKGEG 288
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+ LF +M + +P + L ACA G++E G+W+H ++ + G I + N L
Sbjct: 289 EHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 347
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMYAKSG I A +VF + + +++W ++I+G A HGLG EAL +F +M +A+V+PNE
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 407
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
ITF+++L+AC H GL++ G+ YF +MK ++ IE ++ + ++DLLGRAG L EA K +
Sbjct: 408 ITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 466
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP + AA+WG+LL A ++ +++LG A + + +L+PH+SG + +LSNIYA GR ++
Sbjct: 467 EMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSD 526
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ K+RK+M++ GVKK P CS++E+ VH FVA D SHP + + ++ KI+G++K
Sbjct: 527 AAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 582
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 41/338 (12%)
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
I +L P+ + +L L ++ GR IH + + D+ ++ ++ MYA C
Sbjct: 96 INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC-- 153
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
G L A+ LF+ M K+++SWT LI+GY+
Sbjct: 154 -------------------------------GSLEEAQDLFDKMPTKDMVSWTVLISGYS 182
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
Q Q +EA+ LF +M +P+E + + L A + G +H + +YG + V
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ ++L+DMYA+ + +A +F ++ K+V++W +IAG A G G + +F +M R
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQG 302
Query: 307 VKPNEITFIAILSACCHVGLVELGR-RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+P T+ ++L AC G +E G+ + +++KS G +P +ID+ ++G +++
Sbjct: 303 FEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKS--GGQPIAYIGNTLIDMYAKSGSIKD 359
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
A+K+ RR+ + + W S+++ +G LG ALQ
Sbjct: 360 AKKVFRRL-VKQDIVSWNSIISGYAQHG---LGAEALQ 393
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D N H+ S +D + A IF + +V +N I + + + L+
Sbjct: 236 GYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLF 295
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++ P ++++ VL A ++E G+ +H + +G ++ LI MYA
Sbjct: 296 XQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 354
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I DA+KVF L + ++ WN++++GYA+ G
Sbjct: 355 GSIKDAKKVFRRLVKQ--DIVSWNSIISGYAQHG-------------------------- 386
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
EA+ LF +M V+P+EI L+ L+AC+ G ++ G++ ++++ +
Sbjct: 387 -----LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ 441
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALH 289
V + ++D+ ++G++ +A + E M K + W ++ +H
Sbjct: 442 VAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH 487
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 246/455 (54%), Gaps = 35/455 (7%)
Query: 27 DYAYSIFTHK--SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
D A +F S+ YN + AV+L+ ++ + ++ + ++
Sbjct: 101 DNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIP 160
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A V +ELG +HC T+ G DSDV VV I MY
Sbjct: 161 ACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYM---------------------- 198
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
K G +N A+ LF+ M K +ISW +++GYAQ + L+R M +
Sbjct: 199 -----------KCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMN 247
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
V PD + ++ LS+CA LGA +G + I+ G + LNNALI+MYA+ G + KA
Sbjct: 248 GVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKA 307
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
VF+ M +++++WT +I G +HG G A+ +F M R+ ++P+ F+ +LSAC H
Sbjct: 308 QAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHA 367
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GL + G YF +MK Y +EP E Y CM+DLLGRAG L+EA+ L+ MP + + A+WG+
Sbjct: 368 GLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 427
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A I+ +VEL E A + +I+LEP N G Y +LSNIY+ +IR +M++ +
Sbjct: 428 LLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKL 487
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
KK PGCSY+E+ RVH F+ GD +H D +Y++L
Sbjct: 488 KKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 522
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 179/380 (47%), Gaps = 37/380 (9%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+NT ++ L + L A+ LY ++ RP+ ++FPF LK+ LS LG + H Q
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
G + V LI MY + +ARKVF+E +N +V+GY ++N+
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGY-----VSNS 131
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+ +EA+ LFR+M E V + + +L + AC
Sbjct: 132 KC--------------------------SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSP 165
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
+ELG +H +YG ++ V + N I MY K G + A ++F+ M K +I+W M+
Sbjct: 166 INLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 225
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY-FNIMKSRYG 342
+G A +GL L+++ M+ V P+ +T + +LS+C ++G +G F I S +
Sbjct: 226 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFT 285
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
P + +I++ R G L +A+ + MP E W +++ ++G E+
Sbjct: 286 SNPFLNN--ALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLF 342
Query: 403 QHLIK--LEPHNSGNYAILS 420
+ +I+ +EP + +LS
Sbjct: 343 KEMIRSGIEPDGTAFVCVLS 362
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 127/317 (40%), Gaps = 37/317 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + +++ FI G +YA +F + +N + Q N + LY
Sbjct: 182 GFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELY 241
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ + + PD + VL + L +G E+ + +G S+ + ALI MYA C
Sbjct: 242 RNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARC 301
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A+ VFD + R + W ++ GY + G
Sbjct: 302 GNLTKAQAVFDGMPERT--LVSWTAIIGGYG--------------------------MHG 333
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+ ++ A+ LF+ M ++PD A + LSAC+ G + G E+ Y L
Sbjct: 334 HGEI-----AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEP 388
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRM 302
+ ++D+ ++G++ +A + E+M K W ++ +H A F R+
Sbjct: 389 GPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERV 448
Query: 303 ERARVKPNEITFIAILS 319
++P I + +LS
Sbjct: 449 --IELEPENIGYYVLLS 463
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 286/499 (57%), Gaps = 17/499 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR L NH+L+ + + LG + A +F + DV +NT + A + A
Sbjct: 124 MSVRNLYSWNHMLAGY----AKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEA 179
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY + + + +SF VL VKL ++L +++H Q + G S++ + ++++
Sbjct: 180 IGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDA 239
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + AR +FDE+ ++ ++ W T+V+GYAK GD+N+A LF M EKN +SW+
Sbjct: 240 YAKCGEMRCARTLFDEMLVK--DIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSA 297
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-- 238
LI+GYA+ +EA+ F +M + P++ + L ACA + A++ G+ +H Y+ +
Sbjct: 298 LISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTY 357
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHGLGREALD 297
+ NTIV ++LIDMY+K G + + VF M NK V+ W TMI+ LA +G G +A+
Sbjct: 358 FRCNTIVV--SSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQ 415
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF+ M + +KP+ ITFI ILSAC H GLV+ G R+F M +G+ P E Y C+IDLL
Sbjct: 416 MFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLL 475
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG E L M + + +W +LL I+ ++ELG + +I+L+P +S Y
Sbjct: 476 GRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYV 535
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
L+++YA LG+W K+R++M + ++K G S+I+V + H F+A D HP + +Y
Sbjct: 536 SLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYL 595
Query: 478 ILCKINGQMKFAEHLQNEF 496
+L + A H + +F
Sbjct: 596 LL------EQLARHTEEDF 608
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 69/361 (19%)
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
TG+ D+ + A + + KC++ K + V N ++ Y + G AR
Sbjct: 62 TGIFVDLLRLCAKAKYFKGGKCVHLHLK---HTGFKRPTTIVANHLIGMYFECGRDVEAR 118
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA--------- 215
+F+ M+ +N+ SW ++AGYA++ N A LF RM ++V +LA
Sbjct: 119 KVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNE 178
Query: 216 ----------------------ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
L C +L ++L + +H + G + + L+++++D
Sbjct: 179 AIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVD 238
Query: 254 MYAKSGK-------------------------------IGKALQVFENMKNKSVITWTTM 282
YAK G+ + A ++F M K+ ++W+ +
Sbjct: 239 AYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSAL 298
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I+G A + LG EALD F++M + + P + TF + L AC + ++ G++ + Y
Sbjct: 299 ISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTY- 357
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
+ID+ + G L+ + + M + + +W ++++A G GE A+
Sbjct: 358 FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGH---GEKAM 414
Query: 403 Q 403
Q
Sbjct: 415 Q 415
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL---NTIVPLNN 249
EA++ R+ V+ + L CA+ + G+ +H +++ G TIV N
Sbjct: 45 EALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVA--N 102
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR-MERARVK 308
LI MY + G+ +A +VF+ M +++ +W M+AG A G A +F R ME+ V
Sbjct: 103 HLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVS 162
Query: 309 PNEITFIAILSACCH--VGLVELGRR 332
N I C + +GL RR
Sbjct: 163 WNTIVLAYAKQGCFNEAIGLYRDFRR 188
>gi|414879991|tpg|DAA57122.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 868
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 259/428 (60%), Gaps = 8/428 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
SS S A +F P + +KA PL A+ L+ + L D + F
Sbjct: 429 SSTPPSRTALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLFKHARQH-LADDTFVFT 483
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FVLKA L G ++H V G + +V ALI +Y +C+ +ARKVFDE+ ++
Sbjct: 484 FVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVK 543
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
NV WN M+ G+A G++ AR LF+ M +NV+SWT LI GY + EA+TL R
Sbjct: 544 --NVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRH 601
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M + P EI +LA + A + LG + +GE ++ Y E+ G+ + + N+LID+YAK G
Sbjct: 602 MMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGS 661
Query: 261 IGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ +L+VF+ M +++++WT++I+G A+HGL EAL++F+ M RA +KPN ITF+++++
Sbjct: 662 VQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVIN 721
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLVE G +F M Y I+P+I+ +GC+ID+LGRAG L EAE+++ +P E N
Sbjct: 722 ACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNV 781
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+W LL + YG+V +GE A++ + LE + G++A+LSN+ LGR++++ + RK++
Sbjct: 782 TVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLL 841
Query: 440 RDMGVKKM 447
+ K+
Sbjct: 842 DQRKIVKL 849
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 246/418 (58%), Gaps = 4/418 (0%)
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
LRPD++ F ++KA L +I+LG+++HC + + +D V ++L+ MYA C+ + A+
Sbjct: 38 LRPDDFVFSALVKACANLGSIKLGKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAK 97
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
VFD S+RV N W MV+GYAK G A LF + KN+ SWT LI+G+ Q +
Sbjct: 98 AVFD--SIRVKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKG 155
Query: 192 NEAITLFRRMQVENVKP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
EA ++F M+ E V D + + + + ACA L A G +H + G ++ V ++NA
Sbjct: 156 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNA 215
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
LIDMYAK + A +F M+++ V++WT++I G+A HG +AL ++ M VKPN
Sbjct: 216 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPN 275
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
E+TF+ ++ AC HVG V GR F M YGI P ++ Y C++DLLGR+G L EAE L+
Sbjct: 276 EVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 335
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI-KLEPHNSGNYAILSNIYAILGRW 429
MPF + W +LL+A G ++G HL+ +P + Y +LSNIYA W
Sbjct: 336 HTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASASLW 395
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ + R+ + DM V+K PG S +EV K F AG+TSH + ++++L K+ +M+
Sbjct: 396 GKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHALKEDIFRLLKKLEEEMR 453
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 274/487 (56%), Gaps = 36/487 (7%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL ++ S + SC S G +YA SIF +P + YNT I+ + + A++
Sbjct: 58 GLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALL 117
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
LY ++ + PDN+++PFVLKA L ++ G +IH GL+ DV V LI MY
Sbjct: 118 LYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYG 177
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
K G + +A +FE M EK+V SW+++I
Sbjct: 178 ---------------------------------KCGAIEHAGVVFEQMDEKSVASWSSII 204
Query: 183 AGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+A ++ +E + L M E + +E +++ALSAC LG+ LG IH + +
Sbjct: 205 GAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNIS 264
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V + +LIDMY K G + K L VF+NM +K+ ++T MIAGLA+HG GREAL +FS
Sbjct: 265 ELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSD 324
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M + P+++ ++ +LSAC H GLV+ G + FN M+ + I+P I+ YGCM+DL+GRAG
Sbjct: 325 MLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAG 384
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L+EA L++ MP + N +W SLL+A ++ ++E+GE A ++ KL HN G+Y +L+N
Sbjct: 385 MLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLAN 444
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+YA +W +IR M + + + PG S +E ++ V++FV+ D S P + +Y ++ +
Sbjct: 445 MYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQ 504
Query: 482 INGQMKF 488
+ Q+KF
Sbjct: 505 MEWQLKF 511
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 271/497 (54%), Gaps = 23/497 (4%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L +HL + + + ++LG +A +F P + +A + A+ ++
Sbjct: 43 LHAGSHLPTALLSAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFG 102
Query: 66 KIQASALRPDNY-------------SFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH 112
+ A + PDN SFP L G+ +H V +G+ DV
Sbjct: 103 DMLADGVLPDNVALAVALAACHGTGSFPAALGMAAARRP---GKMVHALIVTSGIVPDVF 159
Query: 113 VVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
V LI++Y + +R++FD + ++ + WN MV Y + ++ +A LF M +
Sbjct: 160 VSTELIRLYGEYGELLVSRRLFDAMPVK--STVSWNAMVHQYIRHSNVGDAYELFLAMPK 217
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN---VKPDEIAMLAALSACAQLGAVELG 229
++V+SW T+IAGY + + EA+ LFR+M + V P+ + L+ACA G +E G
Sbjct: 218 RDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETG 277
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLAL 288
W+H YI++ +N L+ +LIDMYAK G I KALQVFE K + +WTT+I GLA+
Sbjct: 278 IWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAM 337
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
HG +AL MF M+ ++P+++T + +L+AC H GLV+ G +F ++ +Y I PKIE
Sbjct: 338 HGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHGGLVDEGLHHFYSLE-KYAITPKIE 396
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
YGC+IDLLGR G LQEA ++R M + NA IWG+ L A ++ +VELGE A L +L
Sbjct: 397 HYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRL 456
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTS 468
+P + +LS++YA W+ + R+ M + +KK PGCS IE+ VHEFVAG
Sbjct: 457 DPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQMKKTPGCSSIELDGEVHEFVAGSFQ 516
Query: 469 HPDFDRLYQILCKINGQ 485
HP + +L + Q
Sbjct: 517 HPQHGEICTVLENVEAQ 533
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 265/475 (55%), Gaps = 5/475 (1%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
ID + G D A +F + D +N+ I + +A+IL+N+++ S++ D
Sbjct: 319 LIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLD 378
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ P +L G +H T+ +G+ S V A+I MYA C A VF
Sbjct: 379 EFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFR 438
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ LR N W M+ +++ GD+ AR F++M E+N+++W ++++ Y Q E +
Sbjct: 439 LMPLR--NTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGL 496
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L+ M+ V+PD I ++ ACA L V+LG + + ++GL+ V + N+++ MY
Sbjct: 497 KLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMY 556
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
++ G I +A F+++ +K +I+W M+A A +GLG + +D F M + KPN I+++
Sbjct: 557 SRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYV 616
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
++LS C H+GLV G+ YF+ M +GI P E + CM+DLLGRAG L++A+ L+ MPF
Sbjct: 617 SVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPF 676
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ NA +W +LL + ++ D+ L E A + L++L+ S Y +LSN+Y+ G + +
Sbjct: 677 KPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADM 736
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
RK+M+ G++ GCS+IEV RVH F +TSHP +Y K+ MK E
Sbjct: 737 RKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVY---LKLEEMMKMIE 788
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 193/433 (44%), Gaps = 43/433 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ GLD + LL+ + S+ G + A+ +F +++ +NT I+AL + +A
Sbjct: 34 LILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDA 93
Query: 61 VILYNKIQASA-----------------------------LRPDN--------YSFPFVL 83
L++++ +R N +SF V+
Sbjct: 94 EKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVM 153
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
KA L L ++H G + + +++ MY C + A VF ++ +
Sbjct: 154 KACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERP--S 211
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ WN+M+ GY+++ A +F M E++ +SW TLI+ ++Q + + +F M
Sbjct: 212 LFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCN 271
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ P+ + + LSACA ++ G +H I + + + N LIDMYAK G +
Sbjct: 272 QGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDL 331
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +VF++++ I+W ++I G+ GLG +AL +F++M R+ V +E IL C
Sbjct: 332 AKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSG 391
Query: 324 VGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
G +KS G + +I + + G +A+ + R MP N W
Sbjct: 392 PDYASTGELLHGYTIKSGMGSSAPVGN--AIITMYAKCGDTDKADLVFRLMPLR-NTISW 448
Query: 383 GSLLAASNIYGDV 395
+++ A + GD+
Sbjct: 449 TAMITAFSRSGDI 461
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 161/348 (46%), Gaps = 46/348 (13%)
Query: 93 ELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVA 152
+ R++H Q + +GLDS + ++ L+ MY++C +DA +VF E R N+ WNTM+
Sbjct: 25 HIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHR--NIFTWNTMIR 82
Query: 153 GYAKVGDLNNARALFELMT--EKNVISWTTLIAGYAQ---MDQPNEAITLFRRMQVENVK 207
+++A LF+ M K+ +SWTT+I+GY+Q + E +L R + K
Sbjct: 83 ALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGK 142
Query: 208 P-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG---- 262
D + + + AC LG L +H + + G + N+++ MY K G +
Sbjct: 143 NYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202
Query: 263 ---------------------------KALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
KALQ+F M + ++W T+I+ + HG G +
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQC 262
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMI 354
L MF M PN +T+ ++LSAC ++ G + I++ + ++ +I
Sbjct: 263 LAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGN--GLI 320
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
D+ + G L A+++ + + E + W SL+ +G LGE AL
Sbjct: 321 DMYAKCGCLDLAKRVFKSLR-EHDHISWNSLITGVVHFG---LGEDAL 364
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 270/483 (55%), Gaps = 37/483 (7%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L RF S S LG ++A + + K +V +N I++ D+P A+ Y ++++ +
Sbjct: 698 LLRFCAS-SPLGNLNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGI 756
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
PD +FP +LKA +S GR+I + GLD
Sbjct: 757 SPDKLTFPILLKACAAISAFNEGRKIQVDVMKHGLDC----------------------- 793
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
NV V NTM+ Y + +AR +F+ M+ + V+SW +++ + N
Sbjct: 794 ----------NVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLN 843
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
++ LF +M+ PDE M+ LSAC++LG + G W+H+ + + G+ L AL+
Sbjct: 844 DSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALV 903
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMYAK G + +A VF M ++V TW+ MI GLA HG +EAL++F +M+++ + PN +
Sbjct: 904 DMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYV 963
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +L AC H GLV+ G R+F+ M+ +GIEP + YG M+D+L RAG L+EA +
Sbjct: 964 TFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILN 1023
Query: 373 MPFEANAAIWGSLLAASNIYG---DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
MP EA+ +W +LL+A I+G + +G+ + L++LEP SGN+ +++N+YA +G+W
Sbjct: 1024 MPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKW 1083
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+++ +R+ M+D G+KKM G S IEV +H F +GD D + + Q+L +N MK
Sbjct: 1084 DKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLDCEDVLQLLDGLNLHMKTV 1143
Query: 490 EHL 492
+L
Sbjct: 1144 SNL 1146
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 35/289 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD N ++ + I S A +F S V +N + A + ++ L+
Sbjct: 790 GLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLF 849
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K++ S PD + +L A +L + GR +H Q + G+ + + AL+ MYA C
Sbjct: 850 VKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKC 909
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +A VF + R NV W+ M+ G A+ G
Sbjct: 910 GAVCEASLVFHRMLER--NVWTWSAMILGLAQ--------------------------HG 941
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+A+ EA+ LF +M+ ++ P+ + L L AC+ G V+ G + H+ +G+
Sbjct: 942 FAK-----EALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEP 996
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGL 291
++ A++D+ +++G++ +A NM + W T+++ +HG+
Sbjct: 997 MMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGI 1045
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 262/457 (57%), Gaps = 34/457 (7%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
D +N+ I A Q L A+ LY + D ++ VL + + G + H
Sbjct: 205 DEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFH 264
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKC-IYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
+ + TG + + HV + LI MYA C + ++RKVF+E+ ++ VWNTM++GY++
Sbjct: 265 AKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS--DLVVWNTMISGYSQNK 322
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+L+ EA+ FR+MQ PD+ + + A+S
Sbjct: 323 ELS------------------------------VEALECFRQMQRAGYWPDDCSFVCAIS 352
Query: 219 ACAQLGAVELGEWIHNYIEQYGL-NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVI 277
AC+ L + G+ H + + + + +NNAL+ MY+K G + A ++F+ M + +
Sbjct: 353 ACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTV 412
Query: 278 TWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
T ++IAG A HG+G E+L++F +M A + P IT ++ILSAC H G VE G++YFN+M
Sbjct: 413 TLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMM 472
Query: 338 KSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVEL 397
K +GIEP+ E Y CMIDLLGRAG L EAE+L+ MPF +A W +LL A YG++EL
Sbjct: 473 KDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMEL 532
Query: 398 GECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
E A ++LEP N+ Y +L+++Y+ +W E+ +IRK+MRD G++K PGCS+IE++K
Sbjct: 533 AEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNK 592
Query: 458 RVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
RVH FVA D SHP ++ L ++ +MK A ++ +
Sbjct: 593 RVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPD 629
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 189/420 (45%), Gaps = 43/420 (10%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F +PD+ +NT I A + L+A+ L+ +++ L D ++F V+ A
Sbjct: 93 AHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACC- 151
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ + L R++H +G DS V V +L+ Y+ + +A VF+ + V + WN
Sbjct: 152 -NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWN 210
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+M I Y Q + +A+ L+R M +
Sbjct: 211 SM-------------------------------IVAYGQHKRGLKALALYRDMVHRGFEI 239
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK-IGKALQV 267
D + + L+ + + + G H + G N + + LIDMYAK G + ++ +V
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKV 299
Query: 268 FENMKNKSVITWTTMIAGLALHG-LGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
FE + ++ W TMI+G + + L EAL+ F +M+RA P++ +F+ +SAC ++
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSS 359
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
G+++ + +I ++ + + G LQ+A KL +RMP + N S++
Sbjct: 360 PSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP-QHNTVTLNSII 418
Query: 387 AASNIYG----DVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
A +G + L E L + P + +ILS A GR E K +M+D+
Sbjct: 419 AGYAQHGIGTESLNLFEQMLA--ASIAPTSITLVSILSAC-AHTGRVEEGKKYFNMMKDI 475
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 151/331 (45%), Gaps = 11/331 (3%)
Query: 78 SFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL 137
SF +LK+ + + G+ +H + + + S ++ I +Y+ C + A F++
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 138 SLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITL 197
NV +N ++A YAK ++ A LF+ + + +++S+ TLI YA A++L
Sbjct: 70 HEP--NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
F M+ + D ++AC V L +H+ G ++ V + N+L+ Y+K
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSK 185
Query: 258 SGKIGKALQVFENMKN--KSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
+G + +A VF M + ++W +MI H G +AL ++ M + + T
Sbjct: 186 NGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLA 245
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY-LQEAEKLLRRMP 374
++L+ V + G + F+ + G +ID+ + G + E+ K+ +
Sbjct: 246 SVLTTFSCVEDLSGGLQ-FHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEIC 304
Query: 375 FEANAAIWGSLLA--ASNIYGDVELGECALQ 403
++ +W ++++ + N VE EC Q
Sbjct: 305 -GSDLVVWNTMISGYSQNKELSVEALECFRQ 334
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 276/484 (57%), Gaps = 19/484 (3%)
Query: 18 DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNY 77
D SS S Y S+F H + + N ++ L +PL + N R + +
Sbjct: 76 DEASS---SSYPLSLFRHSASASAFASNHLLRVL---PHPLPLRLFPN-----LPRRNLH 124
Query: 78 SFPFVLKAVVK-------LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
SF F+L ++ ++ LG +H V G D++V AL Y C +
Sbjct: 125 SFTFLLASISNHLDATDHRASSFLGSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAM 184
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
R VFDEL RV +V WN ++AGY + G + AR +FE M ++ +SW+TL+ GY + +
Sbjct: 185 RTVFDELP-RVRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGE 243
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
+ A+ +FR M + V+ +E A++ ALSA AQ+G +E G ++H +++ G+ V + A
Sbjct: 244 LDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAA 303
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
L+DM++K G + A +VF+ M + V W MI GLA HGLG++A+++F R + P
Sbjct: 304 LVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPT 363
Query: 311 EITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
+ITF+ +L+AC GLV GRRYF +M +Y IEP++E YGCM+DLLGRAG + EA +L+
Sbjct: 364 DITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELI 423
Query: 371 RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWN 430
M + +WG++L+A + V+LG LI+LEP + G+Y +L++IYA +W+
Sbjct: 424 EGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWD 483
Query: 431 ESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAE 490
E ++RK+M G K G S +E +H+F+ GD H D ++Y +L IN ++ A
Sbjct: 484 EVREVRKLMSSRGTGKSAGWSLMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAG 543
Query: 491 HLQN 494
++ +
Sbjct: 544 YVPD 547
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 247/455 (54%), Gaps = 35/455 (7%)
Query: 27 DYAYSIFTHK--SKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLK 84
D A +F S+ YN + +AV+L+ ++ + ++ + ++
Sbjct: 92 DNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIP 151
Query: 85 AVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNV 144
A V +ELG +HC T+ G DSDV VV I MY
Sbjct: 152 ACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYM---------------------- 189
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
K G +N A+ LF+ M K +ISW +++GYAQ + L+R M +
Sbjct: 190 -----------KCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMN 238
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
V PD + ++ LS+CA LGA +G + ++ G + LNNALI+MYA+ G + KA
Sbjct: 239 GVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKA 298
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
VF+ M +++++WT +I G +HG G A+ +F M R+ ++P+ F+ +LSAC H
Sbjct: 299 QAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHA 358
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
GL + G YF +MK Y +EP E Y CM+DLLGRAG L+EA+ L+ MP + + A+WG+
Sbjct: 359 GLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 418
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A I+ +VEL E A + +I+LEP N G Y +LSNIY+ +IR +M++ +
Sbjct: 419 LLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKL 478
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
KK PGCSY+E+ RVH F+ GD +H D +Y++L
Sbjct: 479 KKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 513
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 37/380 (9%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+NT ++ L + L A+ LY ++ RP+ ++FPF LK+ LS LG + H Q
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
G + V LI MY + +ARKVF+E +N +V+GY ++N+
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGY-----VSNS 122
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+ ++A+ LFR+M E V + + +L + AC
Sbjct: 123 KC--------------------------SDAVLLFRQMNEEGVPVNSVTLLGLIPACVSP 156
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
+ELG +H +YG ++ V + N I MY K G + A ++F+ M K +I+W M+
Sbjct: 157 INLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 216
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY-FNIMKSRYG 342
+G A +GL L+++ M+ V P+ +T + +LS+C ++G +G F + S +
Sbjct: 217 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFT 276
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
P + +I++ R G L +A+ + MP E W +++ ++G E+
Sbjct: 277 SNPFLNN--ALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLF 333
Query: 403 QHLIK--LEPHNSGNYAILS 420
+ +I+ +EP + +LS
Sbjct: 334 KEMIRSGIEPDGTAFVCVLS 353
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 127/317 (40%), Gaps = 37/317 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G D + +++ FI G +YA +F + +N + Q N + LY
Sbjct: 173 GFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELY 232
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ + + PD + VL + L +G E+ + +G S+ + ALI MYA C
Sbjct: 233 RNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARC 292
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A+ VFD + R + W ++ GY + G
Sbjct: 293 GNLTKAQAVFDGMPERT--LVSWTAIIGGYG--------------------------MHG 324
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+ ++ A+ LF+ M ++PD A + LSAC+ G + G E+ Y L
Sbjct: 325 HGEI-----AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEP 379
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMFSRM 302
+ ++D+ ++G++ +A + E+M K W ++ +H A F R+
Sbjct: 380 GPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERV 439
Query: 303 ERARVKPNEITFIAILS 319
++P I + +LS
Sbjct: 440 --IELEPENIGYYVLLS 454
>gi|356528208|ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 444
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/451 (35%), Positives = 257/451 (56%), Gaps = 35/451 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
LD + +S+F+ S++ A + + P ++ +NT I+A T P +++ L+
Sbjct: 27 SLDHHPFFISQFLLQSSTISLPFAASFFHSLPTLPPLFAWNTLIRAFAATPTPFHSLTLF 86
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+Q S L PDN+++PFVLKA + S++ LG +H T+ TG S HV AL+ MYA C
Sbjct: 87 RLLQTSPLNPDNFTYPFVLKACARSSSLPLGGTLHSLTLKTGFRSHRHVGNALLNMYAEC 146
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR VFDE++ R +V+SW++LIA
Sbjct: 147 YAVMSARMVFDEMTDR---------------------------------DVVSWSSLIAA 173
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + P +A +FR M +EN +P+ + +++ LSAC + + +GE IH+Y+ G+
Sbjct: 174 YVASNSPLDAFYVFREMGMENEQPNSVTLVSLLSACTKTLNLRVGESIHSYVTSNGIEMD 233
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V L AL +MYAK G+I KAL VF +M +K++ + T MI+ LA HG ++ + +F++ME
Sbjct: 234 VALGTALFEMYAKCGEIDKALLVFNSMGDKNLQSCTIMISALADHGREKDVISLFTQMED 293
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++ + ++F ILSAC H+GLV+ G+ YF+ M YGI+P +E YGCM+DLLGRAG++Q
Sbjct: 294 GGLRLDSLSFAVILSACSHMGLVDEGKMYFDRMVRVYGIKPSVEHYGCMVDLLGRAGFIQ 353
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA +++ MP E N I S L A +G V L +LE NY + +N+++
Sbjct: 354 EAYDIIKGMPMEPNDVILRSFLGACRNHGWVP--SLDDDFLSELESELGANYVLTANVFS 411
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
W ++ +R M+ G+KK+PGCS++EV
Sbjct: 412 TCASWKDANDLRVAMKLKGLKKVPGCSWVEV 442
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 269/489 (55%), Gaps = 43/489 (8%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
IV GL NN+ +S+ I C S+ G YA IF+ P+++ YNT I+A ++ P
Sbjct: 27 FIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQNPNLFAYNTLIRAYSRSSTPQ 86
Query: 59 NAVILYN-KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGL-DSDVHVVAA 116
A+ + + + PD ++FPF++ A + LG++IH + G+ SD HV A
Sbjct: 87 LALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTA 146
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L++ YA C +GD AR LF+ + +V+
Sbjct: 147 LVRFYAEC------------------------------CAMGD---ARKLFDEIPNLDVV 173
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
W L+ GY + EA+ FR M V V+PDE + AL CAQLGA++ G+WIH Y+
Sbjct: 174 QWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYV 233
Query: 237 EQYG-LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ L V + AL+DMYAK G I ++++VFE M ++V +W+ MI G ALHG R+A
Sbjct: 234 TKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKA 293
Query: 296 LDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
+ RM+ ++P+ + + ++ AC H GL E G+ M++RYGI PK E Y CM+
Sbjct: 294 MQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMV 353
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL----EP 410
DLL RAG L EA KL+RRMP + AA+WG+LL+ + +V+L E A + L+ +
Sbjct: 354 DLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGT 413
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
G Y LSNIY + ++ +IR+++ D +K PGCS IEV V++FV+GD SHP
Sbjct: 414 EEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHP 473
Query: 471 DFDRLYQIL 479
+++++L
Sbjct: 474 CLAQIHEML 482
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 257/429 (59%), Gaps = 2/429 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA S+F DV +N+ I Q + + + L+ +Q ++ D + V+ A
Sbjct: 140 YARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACT 199
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+L + + ++ DV++ L+ + + A KVF +++V N+
Sbjct: 200 RLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVF--FNMKVRNIVTM 257
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+A YAK D+ +AR +F+ + +K++ISW+++I+GY+Q + ++A+ +FR+MQ VK
Sbjct: 258 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 317
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PD I + + +S+CA LGA++LG+W+H Y+ + + + N+LIDMY K G +ALQV
Sbjct: 318 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQV 377
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ MK K ++W ++I GLA +G +E+L++F M +PN +TF+ +L AC + LV
Sbjct: 378 FKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLV 437
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E G +F MK Y +EP+++ YGC++DLLGRAG L++A + + MP + + +W LL
Sbjct: 438 EEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLG 497
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
+ N +GDV + E + L +LEP NSGNY +LSN YA RW+E+ +R+ M D V+K
Sbjct: 498 SCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKS 557
Query: 448 PGCSYIEVS 456
PGCS +E +
Sbjct: 558 PGCSAVEAA 566
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 208/417 (49%), Gaps = 67/417 (16%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
IV GL ++ +S+ + S + L +A+ +F P +L+N I+ L Q+D P +A
Sbjct: 12 IVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADA 71
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y K Q + PDN +FPF+LKA +++ + G ++H GL SD+ V +LI +
Sbjct: 72 IAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHL 131
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA+C + AR VFDE+ ++ +V WN+++ GY++ + ALF+L
Sbjct: 132 YAACGNLCYARSVFDEMVVK--DVVSWNSLICGYSQCNRFKDILALFKL----------- 178
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
MQ E VK D++ M+ +SAC +LG + +++ YIE Y
Sbjct: 179 --------------------MQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYC 218
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK---------------------------- 272
+ V L N L+D + + G++ A +VF NMK
Sbjct: 219 IEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFD 278
Query: 273 ---NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
K +I+W++MI+G + +AL++F +M+RA+VKP+ I +++S+C H+G ++L
Sbjct: 279 QIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDL 338
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
G+ ++ R I+ +ID+ + G +EA ++ + M E + W S++
Sbjct: 339 GKWVHEYVR-RNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMK-EKDTLSWNSII 393
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 2/230 (0%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
DL A +F+ + W LI G AQ D P +AI +++ Q + PD + L
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 95
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
ACA++ A+ GE +HN+I + GL + + ++N+LI +YA G + A VF+ M K V++
Sbjct: 96 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 155
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W ++I G + ++ L +F M+ VK +++T I ++SAC +G + ++
Sbjct: 156 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE 215
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
Y IE + ++D GR G LQ AEK+ M N +++AA
Sbjct: 216 D-YCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAA 263
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 256/455 (56%), Gaps = 5/455 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + + S ++ + LG D+A +F + + L+N ++ + AV L
Sbjct: 76 GFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVALA 135
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ S PD + + A + + LGR I G + V AL+ MY
Sbjct: 136 EEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGV-FGFSLPVANALLDMYTKN 194
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +A K+F ++ R N+ W +V+GYA G L+ AR LF T+K++I WT +I
Sbjct: 195 GYLEEAVKMFQQMPER--NIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINA 252
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Q EA+TLFR MQ++ V+PD+ ++ L+ CA +GA++ GEWIH Y E +
Sbjct: 253 CVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKID 312
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
L ALI+MY+K G + K+LQ+F M+ + WT +I GLA +G +AL++F M+R
Sbjct: 313 AVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQR 372
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++ KP+ ITFI +L+ACCH GLV+ GRR+F MK Y IEP+IE Y C+++LLG AG L
Sbjct: 373 SKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLY 432
Query: 365 EAEKLLRRMPFEANA-AIWGSLLAASNIYGDVELGECALQHLIKLE-PHNSGNYAILSNI 422
EAEKL+R MP + ++G+LL A YG+VE+ E + + K + N ++SN+
Sbjct: 433 EAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDVNVLMSNV 492
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSK 457
YA RW ES ++R M VKK GCS IEV +
Sbjct: 493 YATASRWEESIRVRSKMTHPAVKKTAGCSMIEVKE 527
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 179/376 (47%), Gaps = 73/376 (19%)
Query: 45 NTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
N I+ L + + + +Y ++A L D+Y++PFVL+A+ + GR++H V
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAVK 74
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
TG D + ++L++MY + ARKVFDE+ R + +WN M+ Y + G A
Sbjct: 75 TGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRF--LVLWNMMMRCYIRCGRFTAAV 132
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
AL E M+ PD + ++ A++AC++ G
Sbjct: 133 ALAE-------------------------------EMERSGATPDRVTLVTAVTACSRAG 161
Query: 225 AVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
+ LG I Y++ +G + +P+ NAL+DMY K+G + +A+++F+ M +++I+WT ++
Sbjct: 162 DLSLGRRIRAYMDGVFGFS--LPVANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILV 219
Query: 284 AGLAL-------------------------------HGLGREALDMFSRMERARVKPNEI 312
+G A+ HG EAL +F M+ RV+P++
Sbjct: 220 SGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKF 279
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLL 370
T + +L+ C ++G ++ G + R KI+ +I++ + G++ ++ ++
Sbjct: 280 TVVTLLTCCANIGALDQGEWIHQYAEGR---NMKIDAVLGTALIEMYSKCGHVDKSLQIF 336
Query: 371 RRMPFEANAAIWGSLL 386
RM +AA W +++
Sbjct: 337 GRMQGR-DAAAWTAII 351
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 261/449 (58%), Gaps = 6/449 (1%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKL--STIELGREIHCQ 101
+ + I L + A ++ ++ S + P++ +F +L + L +H
Sbjct: 30 WTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLSNLLHGY 89
Query: 102 TVGTGLD-SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
GLD + V V A+I MY+ + AR VFD + N WNTM+ GY + G +
Sbjct: 90 ACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFD--YMEDINSVTWNTMIDGYMRSGQV 147
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
+NA +F+ M E+++ISWT +I G+ + EA+ FR MQ+ V+PD +A++AAL+AC
Sbjct: 148 DNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNAC 207
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
LGA+ G W+H Y+ V ++N+LID+Y + G + A +VF+ M+ ++V++W
Sbjct: 208 TNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWN 267
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
++I G A +G E+L F +M+ KP+ +TF L+AC HVGLVE G RYF MK
Sbjct: 268 SVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRD 327
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGE 399
YGI P+IE YGC++DL RAG L++A K++ MP + N + GSLLAA +G + L E
Sbjct: 328 YGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTHGNNTVLAE 387
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
++HL L + NY ILSN+YA G+W + ++R+ M+ +G+KK PG S IE+
Sbjct: 388 RLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFSSIEIDDCT 447
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMKF 488
H F+AGD++H + + ++L ++ ++
Sbjct: 448 HVFMAGDSAHVETAIIREVLELVSSDLRL 476
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 35/286 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D N+ + ID G D A +F + D+ + I + A++ + +
Sbjct: 128 DINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFRE 187
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S +RPD + L A L + G +H + ++V V +LI +Y C C
Sbjct: 188 MQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGC 247
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VFD++ R V WN+++ G+A G+
Sbjct: 248 VEFAREVFDKMEKRT--VVSWNSVIVGFAANGN--------------------------- 278
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIV 245
+E++ FR+MQ E KPD + AL+AC+ +G VE G + YG++ +
Sbjct: 279 ----AHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRI 334
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
L+D+Y+++G++ AL+V E+M K + + +++A HG
Sbjct: 335 EHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTHG 380
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
G K+ LN + T + +SWT+ I + + EA F M++ V+P+ I
Sbjct: 12 GXPKIQRLNQS-------TSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHIT 64
Query: 213 MLAALSACAQL--GAVELGEWIHNYIEQYGLN-TIVPLNNALIDMYAK------------ 257
+A LS C G+ L +H Y + GL+ T V + A+I MY+K
Sbjct: 65 FIALLSGCGDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFD 124
Query: 258 -------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
SG++ A+++F+ M + +I+WT MI G G EAL
Sbjct: 125 YMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVW 184
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMID 355
F M+ + V+P+ + IA L+AC ++G + G RY +M + ++ +ID
Sbjct: 185 FREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRY--VMNQDFKNNVRVSN--SLID 240
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
L R G ++ A ++ +M + W S++
Sbjct: 241 LYCRCGCVEFAREVFDKME-KRTVVSWNSVIVG 272
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+Q +++ ++WT+ I L +G EA FS M + V+PN ITFIA+LS C
Sbjct: 16 IQRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGC--- 72
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCM-----IDLLGRAGYLQEAEKLLRRMPFEANA 379
G G + + Y + +++ M I + + G++++A + M + N+
Sbjct: 73 GDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYME-DINS 131
Query: 380 AIWGSLLAASNIYGDVE 396
W +++ G V+
Sbjct: 132 VTWNTMIDGYMRSGQVD 148
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 168/461 (36%), Positives = 263/461 (57%), Gaps = 10/461 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + N + + +D + G ++A +F + DV +N I Q +A+ L+
Sbjct: 193 GFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLF 252
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+I + D ++ ++ + +E E+ + L S ++A +Q +
Sbjct: 253 QEIP----KRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGS-- 306
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +A K+F + R NV WN +++G+A+ G + A LF+ M E NV+SW +IAG
Sbjct: 307 --VKEAFKLFQIMPER--NVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAG 362
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y+Q Q A+ LF +MQ+ ++KP+ L ACA L +E G H + + G +
Sbjct: 363 YSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSD 422
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + N L+ MYAK G I A +VF+ M+ + + + MI G A++G +E+L++F +M+
Sbjct: 423 VLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQF 482
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+KP+ +TF+ +LSACCH GLV+ GR+YF+IM Y I P +E YGCMIDLLGRAG
Sbjct: 483 TGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFD 542
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA L+ +MP + +A +WGSLL+A + +++LGE QHLI L P N Y +LSNIYA
Sbjct: 543 EANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYA 602
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
GRW++ G +R M+D VKK GCS+I + K+VH F+ G
Sbjct: 603 AAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLVG 643
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 16/318 (5%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDEL---S 138
++K++ K + I V G+ +L+Q + K + DA+ + +
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
++++ N +V+ Y K+G L AR +F+ M KNV+SWT +IA YA+ + EA+ F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
MQ ++P+ + L AC L LGE+ H+ I + G + V + N L+DMYAK
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEV--LGEF-HDEIVKGGFESNVFVGNGLVDMYAKR 211
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G I A ++F+ M + V++W MIAG +GL +AL +F + + V IT+ ++
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----ITWNTMM 267
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
+ G VE F M E + + MI + G ++EA KL + MP E N
Sbjct: 268 AGYAQCGDVENAVELFEKMP-----EQNLVSWNTMIAGYVQNGSVKEAFKLFQIMP-ERN 321
Query: 379 AAIWGSLLAASNIYGDVE 396
W ++++ G VE
Sbjct: 322 VISWNAVISGFAQNGQVE 339
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 276/536 (51%), Gaps = 82/536 (15%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
CS + S ++ TH +K +V+ YN I P A+ LYN+++ + PD ++F
Sbjct: 77 CSLIDHSLRVFNFPTHHNK-NVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTF 135
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
P V++A + +IH GL+ DV V +AL+ Y + + +A +VF+EL +
Sbjct: 136 PCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPV 195
Query: 140 RVWNVAVWNTMVAGYAKV-----------------------------------GDLNNAR 164
R +V +WN MV G+A++ GD +N R
Sbjct: 196 R--DVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGR 253
Query: 165 ALFELMT----EKNVISWTTLIAGYAQMDQPNEAITLF---------------------- 198
A+ +T E V+ LI Y + +A+++F
Sbjct: 254 AVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCG 313
Query: 199 ----------RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI--------EQYG 240
R M V+PD + + L AC L A+ G IH Y+ E +
Sbjct: 314 DHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHD 373
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
+ V LNNAL+DMYAK G + A VF NM+ K V +W MI G +HG G EALD+FS
Sbjct: 374 VFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFS 433
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
RM +A++ PNEI+F+ +LSAC H G+V+ G + + M+S+YG+ P IE Y C+ID+L RA
Sbjct: 434 RMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRA 493
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G L EA L+ MPF+A+ W SLLAA ++ D +L E A +I+LEP + GNY ++S
Sbjct: 494 GQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMS 553
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
N+Y ++GR+ E + R M+ VKK PGCS+IE+ VH F+ GD +HP + +Y
Sbjct: 554 NVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIY 609
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 33/312 (10%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L++ + + G+E+H + + +LI MY+ C I + SLRV+
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLI--------DHSLRVF 87
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
N F KNV ++ LIAG+ P A+ L+ +M+
Sbjct: 88 N-----------------------FPTHHNKNVFAYNALIAGFLANALPQRALALYNQMR 124
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ PD+ + AC + IH + + GL V + +AL++ Y K +G
Sbjct: 125 HLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVG 184
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+A +VFE + + V+ W M+ G A G EAL +F RM V P T +LS
Sbjct: 185 EAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFS 244
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
+G + GR + ++ G E + +ID+ G+ + +A + M E + W
Sbjct: 245 VMGDFDNGRAVHGFV-TKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMD-EIDIFSW 302
Query: 383 GSLLAASNIYGD 394
S+++ GD
Sbjct: 303 NSIMSVHERCGD 314
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 267/464 (57%), Gaps = 3/464 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D + LG + A + + + + T + Q N AV LY+++ A RP+
Sbjct: 318 LLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPN 377
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
F VL A L + GR+IH QT+ ++V V +ALI MY CK + DA+ +F
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
L + N+ WN++++GY+ + A LF+ M +NV SW ++I+GYAQ Q +A+
Sbjct: 438 SLPQK--NIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDAL 495
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
F M P EI + L ACA L ++E+G+ +H I + G+ + + AL DMY
Sbjct: 496 KSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMY 555
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AKSG + + +VF M ++ + WT MI GLA +G E++ +F M A + PNE TF+
Sbjct: 556 AKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFL 615
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
AIL AC H GLVE YF +M++ GI PK + Y CM+D+L RAG+L EAE LL ++
Sbjct: 616 AILFACSHSGLVEHAMHYFEMMQA-CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIES 674
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
++ A W +LL+A NIY + E+GE A + L +L+ N+ Y +LSN+YA G+W ++ ++
Sbjct: 675 KSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEM 734
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
R +M+ + +KK GCS++++ + F + +T HP +Y++L
Sbjct: 735 RILMKGINLKKDGGCSWVQIRGQYQAFFSWETKHPLLPDVYEML 778
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 183/379 (48%), Gaps = 38/379 (10%)
Query: 41 VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHC 100
V + I + P +A+ +++++ + + P+ + V+KA + +L I
Sbjct: 210 VPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVG 269
Query: 101 QTVGTGL-DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ + L D ++ V +LI +Y AR++FDE+ +R +V W ++ YA++GD
Sbjct: 270 LAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR--DVVSWTALLDVYAELGD 327
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L AR + + M E+N +SW TL+A + Q EA++L+ +M + +P+ + L A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
CA L + G IHN + + V +++ALIDMY K ++ A +F ++ K+++ W
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCW 447
Query: 280 TTMIAGLALHGLGREALDMFSRMERARV-------------------------------K 308
++I+G + + EA ++F +M V
Sbjct: 448 NSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQS 507
Query: 309 PNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
P EITF ++L AC + +E+G+ + I+K GI+ I + D+ ++G L ++
Sbjct: 508 PGEITFSSVLLACASLCSLEMGKMVHAKIIK--LGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 368 KLLRRMPFEANAAIWGSLL 386
++ MP + N W +++
Sbjct: 566 RVFYEMP-KRNDVAWTAMI 583
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
I AR++FD + R +V + TMV K G + +A L+ +V +T +IAG+
Sbjct: 164 IVSARRLFDGMPER--SVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFV 221
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL----- 241
+ P +A+ +F M V P+EI +++ + AC G +L I + L
Sbjct: 222 LNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNL 281
Query: 242 ---NTIVPLN------------------------NALIDMYAKSGKIGKALQVFENMKNK 274
N+++ L AL+D+YA+ G + A +V + M +
Sbjct: 282 GVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPER 341
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+ ++W T++A G +EA+ ++S+M +PN F ++L AC + + GR+
Sbjct: 342 NEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
N + + +ID+ + L +A+ + +P + N W SL++
Sbjct: 402 N-QTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP-QKNIVCWNSLIS 452
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 42/182 (23%)
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPN 310
++D K G + A++++ SV +T MIAG L+ L ++AL +F M V PN
Sbjct: 185 MVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPN 244
Query: 311 EITFIAILSACCHVGLVEL------------------------------------GRRYF 334
EIT ++++ AC G +L RR F
Sbjct: 245 EITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMF 304
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ M+ R + + ++D+ G L+ A ++L MP E N WG+L+A G+
Sbjct: 305 DEMEVR-----DVVSWTALLDVYAELGDLEGARRVLDEMP-ERNEVSWGTLVARHEQKGN 358
Query: 395 VE 396
+
Sbjct: 359 AK 360
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 266/468 (56%), Gaps = 37/468 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPL---NAVILYNK-IQASALRPDNYSFPFVL 83
YA ++F +P + YN+ I+AL + V++Y + ++A + P++++ F L
Sbjct: 79 YARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFAL 138
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
KA + + GR++H Q GL+ +V L+ +YA C+ + AR VFD + + N
Sbjct: 139 KACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGM-VGDKN 197
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+A W+ M+ GY++VG +N EA+ LFR MQ
Sbjct: 198 LAAWSAMIGGYSRVGMVN-------------------------------EALGLFREMQA 226
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+V PDE+ M++ +SACA+ GA++LG W+H +I++ G+ + L+ ALIDMYAK G I +
Sbjct: 227 ADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIER 286
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VF+ M + W+ MI GLA+HGL AL +FSRM +V+PN +TFI +LSAC H
Sbjct: 287 AKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAH 346
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GLV GRRY++ M+ GI+P +E YGCM+DL R+ L EA + M N+ IW
Sbjct: 347 SGLVNEGRRYWSTMQE-LGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWR 405
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL AS ++ + A + L++LEP N NY +LSN+YA +W+ +RK M++
Sbjct: 406 TLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENN 465
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEH 491
V + GCS IE++ +H+FV D SHP+ + +L +I ++ A H
Sbjct: 466 VNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGH 513
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 292/524 (55%), Gaps = 37/524 (7%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
++ G++ +L S I+ S +G + A S+F+ + DV +N I Q A+
Sbjct: 227 VICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKAL 286
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ + ++ LR D+ + ++ A + ++LG+E HC + L+SDV VV++++ MY
Sbjct: 287 NMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMY 346
Query: 122 ASCKCIYDARKVFDE---LSLRVWN------------------------------VAVWN 148
A C+ I AR+VF+ L +WN V WN
Sbjct: 347 AKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWN 406
Query: 149 TMVAGYAKVGDLNNARALF----ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
+++ G+ G +N A+ +F L + N+++WTTLI+G A+ EAI F+RMQ
Sbjct: 407 SLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEA 466
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
VKP+ ++++ L AC L ++++G +H Y+ ++ L +P+ +L+DMYAK G +A
Sbjct: 467 GVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQA 526
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHV 324
+VF+ + +K + + MI+G ALHG EAL ++ ++ +KP+ ITF L AC H
Sbjct: 527 KRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHA 586
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
+V G F M S + I P IE YGCM+ LL R G L EA L+ MP++ + I GS
Sbjct: 587 MMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGS 646
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LLAA + +EL E L+KL+P NSGNY +SN YA GRW+E K+R++M++ G+
Sbjct: 647 LLAACREHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGL 706
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
+K+PGCS+I+V + ++ FVAGD SHP+ + +Y L + ++ F
Sbjct: 707 RKIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTLALLLMEISF 750
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 47/302 (15%)
Query: 31 SIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
S+F +V+ + I C+ A++ + ++Q + L PDN+ P VLKA L
Sbjct: 68 SLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLE 127
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTM 150
I +G+ +H GL S C Y VW
Sbjct: 128 WIRIGKVVH------GLVS----------------CGY-----------------VW--- 145
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
K+ + M ++N ++W ++I GY Q EAI +F M+ E V+P +
Sbjct: 146 -----KMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQ 200
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFEN 270
+ + + LSA A LGA++ G+ H G+ L ++LI+ Y+K G I A VF
Sbjct: 201 VTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSR 260
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG 330
M K V+TW +I+G G +AL+M M ++ + +T ++SA + ++LG
Sbjct: 261 MLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLG 320
Query: 331 RR 332
+
Sbjct: 321 KE 322
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 25/304 (8%)
Query: 112 HVVAALIQMYASCKCIYDARKVFDEL----SLRVWNVAVWNTMVAGYAKVGDLNNARALF 167
V L+Q + ++ R++ ++ ++ N + +V YAK + + +LF
Sbjct: 11 EVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLF 70
Query: 168 ELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
+ KNV SW +I + EA+ F+ MQ + PD + L AC L +
Sbjct: 71 RRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIR 130
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
+G+ +H + K G + M ++ + W +MI G
Sbjct: 131 IGKVVHGLVS--------------CGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYV 176
Query: 288 LHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+GL EA+++F M V+P ++T + LSA ++G ++ G++ I GIE
Sbjct: 177 QNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAI-AVICGIEMTT 235
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE--LGECALQHL 405
+I+ + G +++AE + RM E + W L++ G+V+ L C HL
Sbjct: 236 NLGSSLINFYSKVGLIEDAESVFSRM-LEKDVVTWNLLISGYVQIGEVDKALNMC---HL 291
Query: 406 IKLE 409
++LE
Sbjct: 292 MRLE 295
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/432 (36%), Positives = 259/432 (59%), Gaps = 6/432 (1%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA---- 115
A L ++ + ++ D Y++ V+ A +GR++H + T + H V
Sbjct: 258 AFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNN 317
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI +Y C + +AR+VFD++ ++ ++ WN +++G + A ++F M +++
Sbjct: 318 ALITLYTRCGKLVEARRVFDKMPVK--DLVSWNAILSGCVNARRIEEANSIFREMPVRSL 375
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
++WT +I+G AQ E + LF +M++E ++P + A A+++C+ LG+++ G+ +H+
Sbjct: 376 LTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQ 435
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I Q G ++ + + NALI MY++ G + A VF M ++W MIA LA HG G +A
Sbjct: 436 IIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQA 495
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ ++ +M + + P+ ITF+ ILSAC H GLV+ GR YF+ M+ YGI P+ + Y +ID
Sbjct: 496 IQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLID 555
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LL RAG EA+ + MPFE A IW +LLA I+G++ELG A L++L P G
Sbjct: 556 LLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGT 615
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y LSN+YA LG+W+E ++RK+MR+ GVKK PGCS+IEV VH F+ D HP+ +
Sbjct: 616 YISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAV 675
Query: 476 YQILCKINGQMK 487
Y+ L ++ +M+
Sbjct: 676 YRYLEQLVHEMR 687
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 203/427 (47%), Gaps = 49/427 (11%)
Query: 14 SRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+ + + S+ G A+ +F T S D YN I A + + A+ L+ +++
Sbjct: 66 TTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLG 125
Query: 72 LRPDNYSFPFVLKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASC------ 124
PD ++F VL A+ ++ E +++HC+ G S V+ AL+ Y SC
Sbjct: 126 FVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLV 185
Query: 125 -KCIY--DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C+ ARK+FDE + W T++AGY + DL AR L E MT+ ++W +
Sbjct: 186 NSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAM 245
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY----IE 237
I+GY EA L RRM ++ DE + +SA + G +G +H Y +
Sbjct: 246 ISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVV 305
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK----------------------- 274
Q + ++ +NNALI +Y + GK+ +A +VF+ M K
Sbjct: 306 QPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANS 365
Query: 275 --------SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
S++TWT MI+GLA +G G E L +F++M+ ++P + + +++C +G
Sbjct: 366 IFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGS 425
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
++ G++ + + + G + + +I + R G ++ A+ + MP+ ++ W +++
Sbjct: 426 LDNGQQLHSQI-IQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY-VDSVSWNAMI 483
Query: 387 AASNIYG 393
AA +G
Sbjct: 484 AALAQHG 490
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M V+ L N +LS C + + A SIF + + I L Q
Sbjct: 339 MPVKDLVSWNAILS----GCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEG 394
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+N+++ L P +Y++ + + L +++ G+++H Q + G DS + V ALI M
Sbjct: 395 LKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITM 454
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + A VF L++ + WN M+A A+ G
Sbjct: 455 YSRCGLVEAADTVF--LTMPYVDSVSWNAMIAALAQHG---------------------- 490
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-Y 239
+AI L+ +M E++ PD I L LSAC+ G V+ G + + Y
Sbjct: 491 ---------HGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCY 541
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREA 295
G+ + LID+ ++G +A V E+M W ++AG +HG LG +A
Sbjct: 542 GITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQA 601
Query: 296 LD 297
D
Sbjct: 602 AD 603
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 53/354 (14%)
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ + +LS R +H + +G ++ LI Y I AR +FD++ +
Sbjct: 4 RYLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKP--D 61
Query: 144 VAVWNTMVAGYAKVGDLNNARALFEL--MTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ TM++ Y+ G++ A LF M+ ++ +S+ +I ++ + A+ LF +M
Sbjct: 62 IVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQM 121
Query: 202 QVENVKPDEIAMLAALSA----------CAQL-------GAVELGEWIHNYIEQYGLNTI 244
+ PD + L A C QL GA+ + ++ + Y
Sbjct: 122 KRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCAS 181
Query: 245 VPLNNALIDM--------------------------YAKSGKIGKALQVFENMKNKSVIT 278
PL N+ + M Y ++ + A ++ E M + +
Sbjct: 182 SPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVA 241
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W MI+G G EA D+ RM ++ +E T+ +++SA + GL +GR+ +
Sbjct: 242 WNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVL 301
Query: 339 SRYGIEPK----IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
R ++P + +I L R G L EA ++ +MP + + W ++L+
Sbjct: 302 -RTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSG 353
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/380 (41%), Positives = 237/380 (62%), Gaps = 6/380 (1%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
++I C + +A +F+++ R +V W MV GYAK+G+++ AR LF+ M E++V
Sbjct: 258 SMIDGCVKCGKMENAHHLFNQMPKR--DVVSWANMVDGYAKLGEIDIARGLFDEMPERDV 315
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
IS ++AGY Q EA+ F M + + PD +L LSA AQLG + G +H
Sbjct: 316 ISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHC 375
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
YIE G + L ALIDMYAK G I AL VFE++ +KS+ W +I GLA+HGLG
Sbjct: 376 YIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEV 435
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A ++F ME+ VKP++ITFI +L+AC H GLV+ G F +M+ + +EPK++ YGCM+
Sbjct: 436 AFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMV 495
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
D+LGRAG+++EA+K + +MP E N +W +LL+A + + +GE +HLI ++ +N
Sbjct: 496 DILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPS 555
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
+Y +LSNIYA G WN+ +IR +M+ +KK+PGCS IE+ VHEF D SHP
Sbjct: 556 SYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVRE 615
Query: 475 LYQI---LCKINGQMKFAEH 491
+Y + L +N ++ + +H
Sbjct: 616 IYSMLDSLSALNSEVAYCKH 635
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 208/424 (49%), Gaps = 31/424 (7%)
Query: 1 MIVRGLDQNNHLLSRFI---DSCSSLGFSDYAYSIF-------THKSKPDVYLYNTTIKA 50
+I G N L +R I S S ++A +F H+ + + +L+N IK+
Sbjct: 37 LITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKS 96
Query: 51 LCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSD 110
++P A +++N + + + D +SF VLKA +L I+ G +IH + SD
Sbjct: 97 FSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSD 156
Query: 111 VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
V + L+ +Y C C+ AR++FD + R + +N+M+ GY K G + +AR LF++M
Sbjct: 157 VFLQNCLMCLYLRCGCLGIARQLFDRMMKR--DSVSFNSMIDGYVKHGMVKSARELFDVM 214
Query: 171 T--EKNVISWTTLIAGYAQMDQP-NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVE 227
+KN+ISW ++I+GYA+ ++ A LF M K D I+ + + C + G +E
Sbjct: 215 PMEQKNLISWNSMISGYARSEEGLRVAWELFEEMP----KRDLISWNSMIDGCVKCGKME 270
Query: 228 LGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA 287
H+ Q +V N ++D YAK G+I A +F+ M + VI+ M+AG
Sbjct: 271 NA---HHLFNQMPKRDVVSWAN-MVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYV 326
Query: 288 LHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEP 345
+G EAL+ F M R + P+ T + LSA +G + G + I + + +
Sbjct: 327 QNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSE 386
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
K+ +ID+ + G + A + + + + W +++ I+G LGE A +
Sbjct: 387 KLGV--ALIDMYAKCGSIDNALSVFEDID-DKSIDHWNAIIGGLAIHG---LGEVAFELF 440
Query: 406 IKLE 409
+++E
Sbjct: 441 MEME 444
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 275/489 (56%), Gaps = 4/489 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP-LN 59
+I G+DQ L + I+ G A ++F D + + + A Q + P L
Sbjct: 29 IIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLT 88
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ + L+PD+Y F ++KA L ++ G+++H + + + D V ++L+
Sbjct: 89 LSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVD 148
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA C R VFD +S + N W M++GYA+ G +A LF+ M KN++SWT
Sbjct: 149 MYAKCGLPDIGRVVFDSISSK--NSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWT 206
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVK-PDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
LI+G Q ++ LF M+ + + D + + + A A L + LG+ IH +
Sbjct: 207 ALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVIL 266
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G + + ++NAL+DMYAK + A ++F M + +++WT++I G A HGL EAL +
Sbjct: 267 LGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSL 326
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
++RM +KPNE+TF+ ++ AC HVGLV GR +FN M YGI P ++ Y C++DLL
Sbjct: 327 YNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLS 386
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R+G+L+EAE L++ MPF+ + A W +LL+A N + + +G HL+ L+P + Y +
Sbjct: 387 RSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYIL 446
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSNIYA W K+R++M M VKK PG S I + K F+AG+TSHP + ++ +
Sbjct: 447 LSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGL 506
Query: 479 LCKINGQMK 487
L +++ +MK
Sbjct: 507 LEELDAEMK 515
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 43/251 (17%)
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+ L+A + + +G+++HC + TG+D + LI MY C I DA +F++L R
Sbjct: 8 YQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR 67
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+ ISW +++ Q + P+ +++F
Sbjct: 68 ---------------------------------DPISWASILTANNQANLPHLTLSMFPA 94
Query: 201 M-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M + + ++PD + ACA LGA++ G+ +H ++ + ++L+DMYAK G
Sbjct: 95 MFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCG 154
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
VF+++ +K+ I+WT MI+G A G +A+ +F +M VK N +++ A++S
Sbjct: 155 LPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMP---VK-NLLSWTALIS 210
Query: 320 ACCHVGLVELG 330
GLV+ G
Sbjct: 211 -----GLVQSG 216
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 12/232 (5%)
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L ACA+ + +G+ +H +I + G++ L+N LI+MY K G I AL +F + ++
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 277 ITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
I+W +++ L L MF M ++ ++P+ F ++ AC +G ++ G++
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQ--- 126
Query: 336 IMKSRYGIEPKIEQ---YGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+ + + + P + ++D+ + G L + +++ N+ W ++++ Y
Sbjct: 127 -VHATFIVSPVSDDDVVKSSLVDMYAKCG-LPDIGRVVFDSISSKNSISWTAMISG---Y 181
Query: 393 GDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
A+Q K+ N ++ L + G W +S + MR G+
Sbjct: 182 AQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGI 233
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 286/499 (57%), Gaps = 17/499 (3%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR L NH+L+ + + LG + A +F + DV +NT + A + A
Sbjct: 124 MSVRNLYSWNHMLAGY----AKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEA 179
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY + + + +SF VL VKL ++L +++H Q + G S++ + ++++
Sbjct: 180 IGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDA 239
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + AR +FDE+ ++ ++ W T+V+GYAK GD+N+A LF M EKN +SW+
Sbjct: 240 YSKCGEMRCARTLFDEMLVK--DIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSA 297
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-- 238
LI+GYA+ +EA+ F +M + P++ + L ACA + A++ G+ +H Y+ +
Sbjct: 298 LISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTY 357
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHGLGREALD 297
+ NTIV ++LIDMY+K G + + VF M NK V+ W TMI+ LA +G G +A+
Sbjct: 358 FRCNTIVV--SSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQ 415
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
MF+ M + +KP+ ITFI ILSAC H GLV+ G R+F M +G+ P E Y C+IDLL
Sbjct: 416 MFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLL 475
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG E L M + + +W +LL I+ ++ELG + +I+L+P +S Y
Sbjct: 476 GRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYV 535
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
L+++YA LG+W K+R++M + ++K G S+I+V + H F+A D HP + +Y
Sbjct: 536 SLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYL 595
Query: 478 ILCKINGQMKFAEHLQNEF 496
+L + A H + +F
Sbjct: 596 LL------EQLARHTEEDF 608
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 152/361 (42%), Gaps = 69/361 (19%)
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
TG+ D+ + A + + KC++ K + V N ++ Y + G AR
Sbjct: 62 TGIFVDLLRLCAKAKYFKGGKCVHLHLK---HTGFKRPTTIVANHLIGMYFECGRDVEAR 118
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA--------- 215
+F+ M+ +N+ SW ++AGYA++ N A LF RM ++V +LA
Sbjct: 119 KVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNE 178
Query: 216 ----------------------ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALID 253
L C +L ++L + +H + G + + L+++++D
Sbjct: 179 AIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVD 238
Query: 254 MYAKSGK-------------------------------IGKALQVFENMKNKSVITWTTM 282
Y+K G+ + A ++F M K+ ++W+ +
Sbjct: 239 AYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSAL 298
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG 342
I+G A + LG EALD F++M + + P + TF + L AC + ++ G++ + Y
Sbjct: 299 ISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTY- 357
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECAL 402
+ID+ + G L+ + + M + + +W ++++A G GE A+
Sbjct: 358 FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGH---GEKAM 414
Query: 403 Q 403
Q
Sbjct: 415 Q 415
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL---NTIVPLNN 249
EA++ R+ ++ + L CA+ + G+ +H +++ G TIV N
Sbjct: 45 EALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVA--N 102
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR-MERARVK 308
LI MY + G+ +A +VF+ M +++ +W M+AG A G A +F R ME+ V
Sbjct: 103 HLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVS 162
Query: 309 PNEITFIAILSACCH--VGLVELGRR 332
N I C + +GL RR
Sbjct: 163 WNTIVLAYAKQGCFNEAIGLYRDFRR 188
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 272/466 (58%), Gaps = 7/466 (1%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P + + AL + +PL+A+ Y +++ AL D + L A KL L ++
Sbjct: 76 PHSHKDSVDYTALIRCSHPLDALRFYLQMRQRALPLDGVALICALGACSKLGDSNLVPQM 135
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H V G V+ ++ Y C + +AR+VF+E+ +V W ++ G K
Sbjct: 136 HVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEP--SVVSWTVVLEGVVKCE 193
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE---NVKPDEIAMLA 215
+ + + +F+ M E+N ++WT LI GY EA L + M + I + +
Sbjct: 194 GVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCS 253
Query: 216 ALSACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
LSAC+Q G V +G W+H Y ++ G + V + +L+DMYAK G+I AL VF +M +
Sbjct: 254 VLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMPRR 313
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+V+ W M+ GLA+HG+G+ ++MF+ M VKP+ +TF+A+LS+C H GLVE G +YF
Sbjct: 314 NVVAWNAMLCGLAMHGMGKVVVEMFACMVE-EVKPDAVTFMALLSSCSHSGLVEQGWQYF 372
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ ++ YGI P+IE Y CM+DLLGRAG L+EAE L++++P N + GSLL A +G
Sbjct: 373 HDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVLGSLLGACYAHGK 432
Query: 395 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
+ LGE ++ L++++P N+ + +LSN+YA+ G+ +++ +RKV+++ G++K+PG S I
Sbjct: 433 LRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMSSIY 492
Query: 455 VSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 500
V ++H F+AGD SHP +Y L + +++ A ++ N VL
Sbjct: 493 VDGQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGYVPNTNCQVL 538
>gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1014
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 240/393 (61%), Gaps = 4/393 (1%)
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
++ +++ + D Y++ +LK+ LS + G+ +H + + TG V ++++Y
Sbjct: 611 FFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGEVIRTGFHRLGKVRIGVVELYT 670
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
S + DA+KVFDE+ R NV VWN MV G+ GD+ + F+ M+E++++SW ++I
Sbjct: 671 SGGRMGDAQKVFDEMPER--NVVVWNLMVRGFCDSGDVQRGLSFFKQMSERSIVSWNSMI 728
Query: 183 AGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL- 241
+ ++ + EA+ LF M + PDE ++ L A LG ++ G+WIH+ E GL
Sbjct: 729 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTMLPISASLGVLDTGKWIHSTAESNGLI 788
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ + NAL+D Y KSG + A +F M+ ++V++W TMI+G A++G G +D+F
Sbjct: 789 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTMISGSAVNGKGESGIDLFDA 848
Query: 302 M-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M E +V PNE TF+ +L+ C + G VE G F +M R+ +EP+ E YG M+DL+ R+
Sbjct: 849 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEPRTEHYGAMVDLMSRS 908
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G ++EA + LR MP ANAA+WGSLL+A +GDV+L E A L+K+EP NSGNY +LS
Sbjct: 909 GRIREAFEFLRNMPVNANAAMWGSLLSACRSHGDVKLAELAAMELVKIEPGNSGNYVLLS 968
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
N+YA GRW + K+R +M+ ++K G S I
Sbjct: 969 NLYAEEGRWQDVEKVRTLMKKNCLRKTTGQSTI 1001
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 111/257 (43%), Gaps = 32/257 (12%)
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
K ++ W + M ++++ F M+ + DE L +C+ L + G+ +
Sbjct: 587 KQMLKWLPANQRHLHMAAGPKSLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 646
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT------------ 280
H + + G + + + ++++Y G++G A +VF+ M ++V+ W
Sbjct: 647 HGEVIRTGFHRLGKVRIGVVELYTSGGRMGDAQKVFDEMPERNVVVWNLMVRGFCDSGDV 706
Query: 281 -------------------TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+MI+ L+ G REAL++F M P+E T + +L
Sbjct: 707 QRGLSFFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTMLPIS 766
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
+G+++ G+ + +S I+ I ++D ++G L+ A + R+M N
Sbjct: 767 ASLGVLDTGKWIHSTAESNGLIKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVS 825
Query: 382 WGSLLAASNIYGDVELG 398
W ++++ S + G E G
Sbjct: 826 WNTMISGSAVNGKGESG 842
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 41/303 (13%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N ++ F DS G S F S+ + +N+ I +L + A+ L+ ++
Sbjct: 694 NLMVRGFCDS----GDVQRGLSFFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID 749
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA-ALIQMYASCKCIY 128
PD + +L L ++ G+ IH GL D V AL+ Y +
Sbjct: 750 QGFDPDEATVVTMLPISASLGVLDTGKWIHSTAESNGLIKDFITVGNALVDFYCKSGDLE 809
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
A +F ++ R NV WNTM++G A G + LF+ M E+
Sbjct: 810 AATAIFRKMQRR--NVVSWNTMISGSAVNGKGESGIDLFDAMIEEG-------------- 853
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY-IEQYGLNTIVPL 247
V P+E L L+ C+ G VE GE + +E++ L
Sbjct: 854 ----------------KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEPRTEH 897
Query: 248 NNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
A++D+ ++SG+I +A + NM N + W ++++ HG + L + ME +
Sbjct: 898 YGAMVDLMSRSGRIREAFEFLRNMPVNANAAMWGSLLSACRSHGDVK--LAELAAMELVK 955
Query: 307 VKP 309
++P
Sbjct: 956 IEP 958
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 255/487 (52%), Gaps = 68/487 (13%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAV-ILYNKIQASALRPDNYSFPFVLKAVVKLS 90
+F P YL+N IK V IL ++ RPD Y+FP V+K
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---VW----- 142
+ +G +H + G D DV V + + Y CK ++ ARKVF E+ R W
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 143 ---------------------NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS---- 177
N+ WN +V G K GDL NA+ LF+ M ++++IS
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 178 ---------------------------WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
W+ LI GYAQ QPNEA +F M +NVKPDE
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDMYAKSGKIGKALQ 266
M+ +SAC+Q+G EL E + +Y+ Q + + +VP ALIDM AK G + +A +
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP---ALIDMNAKCGHMDRAAK 361
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+FE M + ++++ +M+ G+A+HG G EA+ +F +M + P+E+ F IL C L
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G RYF +M+ +Y I + Y C+++LL R G L+EA +L++ MPFEA+A+ WGSLL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+++G+ E+ E +HL +LEP ++G+Y +LSNIYA L RW + +R M + G+ K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 447 MPGCSYI 453
+ G S+I
Sbjct: 542 ICGRSWI 548
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 45/291 (15%)
Query: 83 LKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
L+ + KL E+ +IH + + GL+ D ++++ I +
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSS------------------- 53
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT-LFRR 200
+ L+ + ++FE + W LI GY+ E ++ L R
Sbjct: 54 -------------SSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRM 100
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M+ +PDE + C+ G V +G +H + + G + V + + +D Y K
Sbjct: 101 MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKD 160
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILS 319
+ A +VF M ++ ++WT ++ G EA MF M ER N ++ A++
Sbjct: 161 LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER-----NLGSWNALVD 215
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
G + ++ F+ M R I Y MID + G + A L
Sbjct: 216 GLVKSGDLVNAKKLFDEMPKR-----DIISYTSMIDGYAKGGDMVSARDLF 261
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 261/468 (55%), Gaps = 33/468 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D + G ++ +F K DV ++ I Q++ AV L+ +++ + + P+
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPN 242
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++F VL++ + ++LG+++HC + GLD +V V AL+ +YA C + ++ K+F
Sbjct: 243 QFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFM 302
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
EL R N WNTM+ GY + GD ++A+
Sbjct: 303 ELPNR--NEVTWNTMIVGYVQSGD-------------------------------GDKAL 329
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+L++ M V+ E+ + L ACA L A+ELG IH+ + + V + NALIDMY
Sbjct: 330 SLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMY 389
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G I A VF+ + + I+W MI+G ++HGL EAL F M+ PN++TF+
Sbjct: 390 AKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFV 449
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+ILSAC + GL+++G+ YF M YGIEP +E Y CM+ LLGR+G+L +A KL+ +P
Sbjct: 450 SILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPL 509
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
E N +W +LL A I+ DV+LG + Q +++++P + + +LSNIYA RWN +
Sbjct: 510 EPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASV 569
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
RK M++ GVKK PG S+IE VH F GDTSHPD + +L +N
Sbjct: 570 RKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLN 617
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 208/419 (49%), Gaps = 39/419 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + N + + ID+ + G + A F + D+ + + + D +++ L+
Sbjct: 71 GHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLF 130
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ P++++F VLKA + L +G+ +H + T + D++V L+ +Y
Sbjct: 131 AEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKF 190
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
D +VF+E+ +V W+ M I+
Sbjct: 191 GDANDVLRVFEEMPKH--DVIPWSFM-------------------------------ISR 217
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ +Q EA+ LF +M+ V P++ + L +CA + ++LG+ +H ++ + GL+
Sbjct: 218 YAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGN 277
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V ++NAL+D+YAK G++ ++++F + N++ +TW TMI G G G +AL ++ M
Sbjct: 278 VFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLE 337
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+V+ +E+T+ ++L AC + +ELG + ++ +K+ Y + + +ID+ + G +
Sbjct: 338 CQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIY--DKDVVVGNALIDMYAKCGSI 395
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE--PHNSGNYAILS 420
+ A +L+ M E + W ++++ +++G V A Q + + E P+ +ILS
Sbjct: 396 KNA-RLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILS 453
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 162/352 (46%), Gaps = 37/352 (10%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+ T I+ Q+ V L++++ + + F +LK +V + EL +H
Sbjct: 9 FVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIY 68
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
G +S+ V ALI YA C G +N+A
Sbjct: 69 KLGHESNAFVGTALIDAYAVC---------------------------------GSVNSA 95
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
R F+ + K+++SWT ++A YA+ D+ +++ LF M++ P+ L AC L
Sbjct: 96 RQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGL 155
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
A +G+ +H + + + + L+D+Y K G L+VFE M VI W+ MI
Sbjct: 156 EAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMI 215
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYG 342
+ A REA+++F +M RA V PN+ TF ++L +C + ++LG++ + +++K G
Sbjct: 216 SRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLK--VG 273
Query: 343 IEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
++ + ++D+ + G L + KL +P N W +++ GD
Sbjct: 274 LDGNVFVSNALMDVYAKCGRLDNSMKLFMELP-NRNEVTWNTMIVGYVQSGD 324
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD N + + +D + G D + +F + +NT I Q+ + A+ LY
Sbjct: 273 GLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLY 332
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ ++ VL+A L+ +ELG +IH ++ T D DV V ALI MYA C
Sbjct: 333 KNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKC 392
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I +AR VFD LS R + WN M++GY+ G + A F++M E +
Sbjct: 393 GSIKNARLVFDMLSER--DEISWNAMISGYSMHGLVGEALKAFQMMQETECV-------- 442
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNT 243
P+++ ++ LSAC+ G +++G+ + + ++ YG+
Sbjct: 443 -----------------------PNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEP 479
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ ++ + +SG + KA+++ E + +V W ++ +H
Sbjct: 480 CMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIH 526
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M ++N +S+ TLI GY Q Q +E + LF R+ E + + L + EL
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+H I + G + + ALID YA G + A Q F+ + K +++WT M+A A +
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 290 GLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI------ 343
+++L +F+ M PN TF +L AC +G F++ KS +G
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKAC-------IGLEAFSVGKSVHGCVLKTCY 173
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
E + ++DL + G + ++ MP
Sbjct: 174 EMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 266/474 (56%), Gaps = 8/474 (1%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV-ILYNKIQ-----ASALRPDNYSFP 80
D A +F DV +N+ I A+ I Y I+ + +PD +
Sbjct: 167 DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTIT 226
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L+A L +E G+ +H + +G + D LI MYA C + +++VF + +
Sbjct: 227 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 286
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+ WN+M+ Y + G + ++ +FE M +++I+W T+IA + N + + R
Sbjct: 287 --DSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISR 344
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M+ E V PD ML+ L C+ L A G+ IH I + GL + VP+ N LI+MY+K G
Sbjct: 345 MRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGS 404
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ + QVF+ MK K V+TWT +I+ ++G G++A+ F ME A + P+ + F+AI+ A
Sbjct: 405 LRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFA 464
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H GLVE G YF+ MK Y IEP+IE Y C++DLL R+ L +AE + MP + +++
Sbjct: 465 CSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSS 524
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
IWG+LL+A + GD E+ E + +I+L P ++G Y ++SNIYA LG+W++ IRK ++
Sbjct: 525 IWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIK 584
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
G+KK PGCS++E+ +V+ F G F+ + ++L + G M ++ N
Sbjct: 585 ARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIAN 638
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 189/398 (47%), Gaps = 61/398 (15%)
Query: 29 AYSIFTHKSKPD-VYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
++S+F S + VYL+N+ I+AL A+ LY++ Q L+PD Y+FP V+ A
Sbjct: 67 SFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA 126
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L E+ + IH + + G SD+++ ALI MY + ARKVF+E+ LR +V W
Sbjct: 127 GLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR--DVVSW 184
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N++++GY G N A ++ ++I LF M V K
Sbjct: 185 NSLISGYNANGYWNEALEIYY------------------------QSIKLFMEM-VNQFK 219
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK---------- 257
PD + + + L AC LG +E G+++H+Y+ G +N LI+MYAK
Sbjct: 220 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 279
Query: 258 ---------------------SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+GK+G +L+VFENMK + +ITW T+IA L
Sbjct: 280 FSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 339
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
M SRM V P+ T ++IL C + G+ + + G+E + +I++
Sbjct: 340 RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI-FKLGLESDVPVGNVLIEM 398
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
+ G L+ + ++ + M + + W +L++A +YG+
Sbjct: 399 YSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE 435
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 131/250 (52%), Gaps = 12/250 (4%)
Query: 150 MVAGYAKVGDLNNARALFELMT-EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
++A YA D ++ ++F L + NV W ++I +EA++L+ Q ++P
Sbjct: 54 LIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQP 113
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D + ++ACA L E+ + IH+ + G + + + NALIDMY + + KA +VF
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF 173
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSR-----MERA-RVKPNEITFIAILSACC 322
E M + V++W ++I+G +G EAL+++ + ME + KP+ +T +IL AC
Sbjct: 174 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACG 233
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H+G +E G+ + M + G E +I++ + G L ++++ M + ++ W
Sbjct: 234 HLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-DSVSW 291
Query: 383 GSLLAASNIY 392
S++ N+Y
Sbjct: 292 NSMI---NVY 298
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 268/481 (55%), Gaps = 36/481 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V G ++ LL++ + + G Y +F S PD +L+N+ IKA L+A
Sbjct: 33 LVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDA 92
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V Y ++ S + P Y+F V+KA LS + LG +H +G S+ V AAL+
Sbjct: 93 VFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTF 152
Query: 121 YA-SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
YA SC + RV AR +F+ M ++++I+W
Sbjct: 153 YAKSC-------------TPRV---------------------ARKVFDEMPQRSIIAWN 178
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++I+GY Q +EA+ +F +M+ +PD ++ LSAC+QLG+++LG W+H I
Sbjct: 179 SMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGT 238
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G+ V L +L++M+++ G +G+A VF++M +V++WT MI+G +HG G EA+++F
Sbjct: 239 GIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVF 298
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
RM+ V PN +T++A+LSAC H GL+ GR F MK YG+ P +E + CM+D+ GR
Sbjct: 299 HRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGR 358
Query: 360 AGYLQEAEKLLRRMPFEA-NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
G L EA + +R + E A+W ++L A ++ + +LG ++LI EP N G+Y +
Sbjct: 359 GGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVL 418
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
LSN+YA+ GR + +R VM G+KK G S I+V R + F GD SHP+ + +Y
Sbjct: 419 LSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCY 478
Query: 479 L 479
L
Sbjct: 479 L 479
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 253/437 (57%), Gaps = 2/437 (0%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
+V +NT I Q A L+ +++ + D ++F +L K +E+GR +H
Sbjct: 173 NVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVH 232
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
C + +G D+ + AL+ MY C ++ A + FD + ++ NV W +M+ AK G
Sbjct: 233 CHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIK--NVVSWTSMLCALAKHGS 290
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
++ AR FE M E+N+ISW +I+ Y Q + E + L+ RM+ + PDE+ + LS
Sbjct: 291 VDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSV 350
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
Q G + G IH YI+ + V + N+LIDMYA+ G++ ++ +F M NK+ I+W
Sbjct: 351 HGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISW 410
Query: 280 TTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS 339
+I LA+HG +EA+ F M P+EITF+ +LSAC H GL+E G+ YF M+
Sbjct: 411 NVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRH 470
Query: 340 RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
Y ++P++E Y CM+DLLGR G+L +A L++ MP + + +WG+L+ A I+G VE+G+
Sbjct: 471 IYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGK 530
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
A++ L++LE N G + ++SN+ +W + ++RK+MRD G KK G S IE++ +
Sbjct: 531 LAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSI 590
Query: 460 HEFVAGDTSHPDFDRLY 476
HEF D H ++Y
Sbjct: 591 HEFGVEDIRHESSSQIY 607
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 65/400 (16%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
+A +F PD + YN+ I+A + P A+ L+ + + P+ ++ PFVLKA
Sbjct: 59 HARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACS 118
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ E H + G V V AL+ AS + D+R++F E++ NV W
Sbjct: 119 RARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPH-RNVVSW 177
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
NTM+ G A+ G+ + A A LFR M+ + V
Sbjct: 178 NTMIGGCAQAGETSEACA-------------------------------LFREMRRQGVL 206
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D ++ L C++ G +E+G +H ++ G + L NAL+DMY K G + A +
Sbjct: 207 ADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRC 266
Query: 268 FENMKNKSVITWTTMIAGLALHGL-----------------------------GR--EAL 296
F+ M K+V++WT+M+ LA HG GR E L
Sbjct: 267 FDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETL 326
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+++RM+ + P+E+T +LS G + GR ++ + +P + +ID+
Sbjct: 327 GLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFS-DPGVTVLNSLIDM 385
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
R G + + L MP N W ++ A ++G +
Sbjct: 386 YARCGQVDTSISLFTEMP-NKNTISWNVIIGALAMHGRAQ 424
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 144/307 (46%), Gaps = 12/307 (3%)
Query: 145 AVWNTMVAGY----AKVGD--LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
+V +VA Y + GD L +AR +F+ + + + ++ +LI Y+ P EA+ L
Sbjct: 36 SVVPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLH 95
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
R + + P+E + L AC++ A E H + G V + NAL+ A +
Sbjct: 96 RDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASA 155
Query: 259 GKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
G + + ++F M +++V++W TMI G A G EA +F M R V + TF+++
Sbjct: 156 GSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSL 215
Query: 318 LSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA 377
L C G +E+GR M + G + ++D+ G+ G L A + MP +
Sbjct: 216 LLVCSKEGNLEVGRLVHCHMLAS-GSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIK- 273
Query: 378 NAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRK 437
N W S+L A +G V + A ++ N ++ + + Y GR+ E+ +
Sbjct: 274 NVVSWTSMLCALAKHGSV---DAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYN 330
Query: 438 VMRDMGV 444
M+ +G+
Sbjct: 331 RMKSLGL 337
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A F + ++ +N I Q + LYN++++ L PD + VL
Sbjct: 289 GSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVL 348
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ + GR IHC + D V V+ +LI MYA C
Sbjct: 349 SVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARC------------------- 389
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
G ++ + +LF M KN ISW +I A + EA+ FR M
Sbjct: 390 --------------GQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVS 435
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIG 262
+ PDEI + LSAC+ G +E G++ + Y + V ++D+ + G +
Sbjct: 436 DAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLA 495
Query: 263 KALQVFENMKNK-SVITWTTMIAGLALHG---LGREALDMFSRME 303
KA+ + ++M K V+ W +I +HG +G+ A+ +E
Sbjct: 496 KAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELE 540
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 263/449 (58%), Gaps = 6/449 (1%)
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE--LGREIHCQTVGTGLD-SDVHVVA 115
N ++ ++ + + P++ +F +L + LG +H GLD + V V
Sbjct: 1 NGAQGFSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGT 60
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A++ MY+ AR +FD + + N WNTM+ GY + G +N A LF+ M +++
Sbjct: 61 AILGMYSKRGRFRKARLIFDYMEDK--NSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDL 118
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
ISWT ++ G+ + EA++ FR MQ+ VKPD +A++AAL+AC LGA+ G WIH Y
Sbjct: 119 ISWTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRY 178
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ V ++N+LID+Y + G + A QVF+ M+ ++V++W ++I G A +G E+
Sbjct: 179 VMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHES 238
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L F +M+ KP+ +TF L+AC HVGLVE G RYF MK Y I P+IE YGC++D
Sbjct: 239 LFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVD 298
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHNSG 414
L RAG L++A K+++ MP + N + GSLLAA +G + L E ++HL L +
Sbjct: 299 LYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHS 358
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
NY ILSN+YA G+W + K+R+ M+ +G+KK PG S IE+ + H F+AGD++H +
Sbjct: 359 NYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETAN 418
Query: 475 LYQILCKINGQMKFAEHLQNEFSGVLESD 503
+ +IL ++ ++ + +G L +D
Sbjct: 419 IREILGLMSSDLRLQGCVVETLAGDLLND 447
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D+N+ + ID G + A +F D+ + + + A+ + +
Sbjct: 84 DKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHEEALSWFRE 143
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S ++PD + L A L + G IH + ++V V +LI +Y C C
Sbjct: 144 MQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSNSLIDLYCRCGC 203
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VFD++ R V WN+++ G+A G+
Sbjct: 204 VEFARQVFDKMEKRT--VVSWNSVIVGFAANGN--------------------------- 234
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIV 245
+E++ FR+MQ E KPD + AL+AC+ +G VE G + Y ++ +
Sbjct: 235 ----AHESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRI 290
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
++D+Y+++G++ AL+V ++M K + + +++A HG
Sbjct: 291 EHYGCIVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHG 336
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 267/490 (54%), Gaps = 33/490 (6%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++ + +D S G A IF + V +N+ I Q +P A+ ++
Sbjct: 306 GFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIF 365
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K+ + N + L A L +E GR +H
Sbjct: 366 QKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVH------------------------- 400
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
K+ D+L L +V+V N++++ Y+K ++ A +FE + K ++SW +I G
Sbjct: 401 -------KLLDQLELGS-DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ + NEAI F +MQ++N+KPD M++ + A A+L + +WIH + + L+
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKN 512
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + AL+DMYAK G + A ++F+ M + V TW MI G HGLG+ AL++F +M++
Sbjct: 513 VFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+KPNE+TF+ +LSAC H GLVE G +YF MK YG+EP ++ YG M+DLLGRA L
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLN 632
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA +++MP E +++G++L A I+ +VELGE A + L+P + G + +L+NIYA
Sbjct: 633 EAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYA 692
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
W++ ++R M G++K PG S +E+ VH F +G TSHP ++Y L +
Sbjct: 693 TASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGN 752
Query: 485 QMKFAEHLQN 494
++K A ++ +
Sbjct: 753 RIKAAGYMPD 762
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 203/409 (49%), Gaps = 38/409 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+IV G N ++ ++ + + AY +F + D+ +NT I Q A
Sbjct: 201 LIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTA 260
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L ++Q RPD+ + +L AV + ++ +GR IH ++ G +S V+V AL+ M
Sbjct: 261 LELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDM 320
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + AR +FD ++ + V WN+M+ GY + GD
Sbjct: 321 YSKCGSVGTARLIFDRMTGK--TVVSWNSMIDGYVQNGD--------------------- 357
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
P A+ +F++M E V+ + ++ AL ACA LG VE G ++H ++Q
Sbjct: 358 ----------PGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLE 407
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L + V + N+LI MY+K ++ A ++FEN+++K++++W MI G A +G EA+D F
Sbjct: 408 LGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFC 467
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+M+ +KP+ T ++++ A + ++ ++ + + R ++ + ++D+ +
Sbjct: 468 KMQLQNIKPDSFTMVSVIPALAELSVLPQA-KWIHGLVIRTCLDKNVFVATALVDMYAKC 526
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE 409
G + A KL M E + W +++ YG LG+ AL+ K++
Sbjct: 527 GAVHTARKLFDMMD-ERHVTTWNAMIDG---YGTHGLGKAALELFEKMK 571
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 151/289 (52%), Gaps = 33/289 (11%)
Query: 43 LYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQT 102
LY+T +K + + +AV + +++ +RP Y+F ++LK + + G+EIHCQ
Sbjct: 142 LYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQL 201
Query: 103 VGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+ G S+V + ++ MYA C+ + +A K
Sbjct: 202 IVNGFASNVFAMTGVVNMYAKCRLVEEAYK------------------------------ 231
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
+F+ M E++++ W T+I+GYAQ A+ L RMQ E +PD I +++ L A A
Sbjct: 232 ---MFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVAD 288
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
+G++ +G IH Y + G + V ++ AL+DMY+K G +G A +F+ M K+V++W +M
Sbjct: 289 VGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSM 348
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
I G +G A+++F +M +V+ +T + L AC +G VE GR
Sbjct: 349 IDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 2/245 (0%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+V+ + K G L+ A +F+ + +K + T++ GYA+ ++A++ F RM+ + V+P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPV 174
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
L C + G+ IH + G + V +++MYAK + +A ++F+
Sbjct: 175 VYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFD 234
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M + ++ W T+I+G A +G G+ AL++ RM+ +P+ IT ++IL A VG + +
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
GR R G E + ++D+ + G + A + RM + + W S++
Sbjct: 295 GRSIHG-YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVS-WNSMIDGY 352
Query: 390 NIYGD 394
GD
Sbjct: 353 VQNGD 357
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 260/470 (55%), Gaps = 36/470 (7%)
Query: 20 CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSF 79
C L + A+++ K D+ +N I Q + A+ L+ ++ + + +
Sbjct: 407 CDLLEDARMAFNLLPEK---DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTL 463
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
+LK+ L + + R++H +V +G SD++VV
Sbjct: 464 STILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV------------------------- 498
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
N+++ Y K + +A +FE T +++S+T++I YAQ Q EA+ LF
Sbjct: 499 --------NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFL 550
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
MQ +KPD + L+ACA L A E G+ +H +I +YG + N+L++MYAK G
Sbjct: 551 EMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCG 610
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
I A + F + + +++W+ MI GLA HG GR+AL +F++M + V PN IT +++L
Sbjct: 611 SIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLG 670
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLV + YF M+ +G +P E Y CMIDLLGRAG + EA +L+ +MPFEANA
Sbjct: 671 ACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANA 730
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
++WG+LL A+ I+ DVELG A + L LEP SG + +L+NIYA G+W ++R++M
Sbjct: 731 SVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLM 790
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
RD VKK PG S+IEV +V+ F+ GD SH +Y L +++ M A
Sbjct: 791 RDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKA 840
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 214/465 (46%), Gaps = 68/465 (14%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
NHL++ + C + G YA + S+PD+ ++ I Q A++ ++++
Sbjct: 95 NHLINLY-SKCRNFG---YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
++ + ++F VLKA + + +G+++H V +G + DV V L+ MYA C D
Sbjct: 151 LGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD 210
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
++++FDE+ R NV WN L + Y Q+D
Sbjct: 211 SKRLFDEIPER--NVVSWN-------------------------------ALFSCYVQID 237
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
EA+ LF M + +KP+E ++ + ++AC L G+ IH Y+ + G + N
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
AL+DMYAK G + A+ VFE +K +++W +IAG LH +AL++ +M+R+ + P
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICP 357
Query: 310 NEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
N T + L AC +GL ELGR+ + ++MK +E + ++D+ + L++A
Sbjct: 358 NIFTLSSALKACAGMGLKELGRQLHSSLMK--MDMESDLFVSVGLVDMYSKCDLLEDARM 415
Query: 369 LLRRMPFEANAAIWGSLLAA-SNIYGDVELGECALQHLIKLEPHNSG-NYAILSNIYAIL 426
+P E + W ++++ S + D+E AL +++ G N LS I
Sbjct: 416 AFNLLP-EKDLIAWNAIISGYSQYWEDME----ALSLFVEMHKEGIGFNQTTLSTI---- 466
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
+K G + V ++VH H D
Sbjct: 467 -----------------LKSTAGLQVVHVCRQVHGLSVKSGFHSD 494
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 200/437 (45%), Gaps = 44/437 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G D + + +D + +G A S+F +PD+ +N I ++ A
Sbjct: 284 LIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQA 343
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L +++ S + P+ ++ LKA + ELGR++H + ++SD+ V L+ M
Sbjct: 344 LELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDM 403
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C + DAR F+ L + ++ WN +++GY++ W
Sbjct: 404 YSKCDLLEDARMAFNLLPEK--DLIAWNAIISGYSQY--------------------WED 441
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+ EA++LF M E + ++ + L + A L V + +H + G
Sbjct: 442 M-----------EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG 490
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
++ + + N+LID Y K + A ++FE ++++T+MI A +G G EAL +F
Sbjct: 491 FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFL 550
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+ +KP+ ++L+AC ++ E G++ + +I+K YG I ++++ +
Sbjct: 551 EMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK--YGFVLDIFAGNSLVNMYAK 608
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK-LEPHNSGNYAI 418
G + +A + + E W +++ +G G ALQ + L+ S N+
Sbjct: 609 CGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNHIT 664
Query: 419 LSNIYAILGRWNESGKI 435
L ++LG N +G +
Sbjct: 665 L---VSVLGACNHAGLV 678
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 170/378 (44%), Gaps = 38/378 (10%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F + +V +N Q D AV L+ ++ S ++P+ +S ++ A L
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
G+ IH + G D D AL+ MY
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMY------------------------------ 303
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
AKVGDL +A ++FE + + +++SW +IAG + +A+ L +M+ + P+
Sbjct: 304 ---AKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIF 360
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ +AL ACA +G ELG +H+ + + + + + ++ L+DMY+K + A F +
Sbjct: 361 TLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLL 420
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K +I W +I+G + + EAL +F M + + N+ T IL + + +V + R
Sbjct: 421 PEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCR 480
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
+ + + G I +ID G+ ++++AE++ + + S++ A
Sbjct: 481 QVHG-LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTSMITAYAQ 538
Query: 392 YGDVELGECALQHLIKLE 409
YG GE AL+ ++++
Sbjct: 539 YGQ---GEEALKLFLEMQ 553
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 147/338 (43%), Gaps = 42/338 (12%)
Query: 54 TDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHV 113
+ +P IL N I P + S+ +L ++ G +IH +GL D +
Sbjct: 35 SQDPQTTAIL-NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSI 93
Query: 114 VAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK 173
LI +Y+ C+ + AR L + +E
Sbjct: 94 RNHLINLYSKCR---------------------------------NFGYARKLVDESSEP 120
Query: 174 NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH 233
+++SW+ LI+GYAQ A+ F M + VK +E + L AC+ + + +G+ +H
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ G V + N L+ MYAK + + ++F+ + ++V++W + +
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCG 240
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR---YFNIMKSRYGIEPKIEQY 350
EA+ +F M + +KPNE + ++++AC GL + R + ++K Y +P
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPF--SA 296
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
++D+ + G L +A + ++ + + W +++A
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAG 333
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LI Q Q + + + N P ++ LS C ++ G IH +I + G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L+ + N LI++Y+K G A ++ + +++W+ +I+G A +GLG AL F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
M VK NE TF ++L AC V + +G++ ++ G E + ++ + +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEGDVFVANTLVVMYAKC 205
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLA 387
++++L +P E N W +L +
Sbjct: 206 DEFLDSKRLFDEIP-ERNVVSWNALFS 231
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 266/503 (52%), Gaps = 47/503 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFS-----DYAYSIFTHKSKP-DVYLYNTTIK--ALCQTDN 56
GL + ++R + C+ G + YA +F P DV YNT ++ A C
Sbjct: 58 GLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAG 117
Query: 57 PL-----NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDV 111
A ++ ++ + PD Y+F +LKA E GR+ H V G
Sbjct: 118 GARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHE 177
Query: 112 HVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT 171
+V+ LI MYA C GD AR +F +
Sbjct: 178 YVLPTLINMYAEC---------------------------------GDARAARTMFGRVD 204
Query: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
+ V+S+ +I + +P EA+ LFR MQ + +K + +++ LSACA LGA+ELG W
Sbjct: 205 GECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRW 264
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH Y+ + L+++V +N ALIDMY K G + A+ VF+ M+++ W+ MI A H
Sbjct: 265 IHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSY 324
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
GREA+ +F M++ +KP+++TF+ +L AC H GLV G +YF+ M+ +G+ P I+ YG
Sbjct: 325 GREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMRE-FGLVPGIKHYG 383
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
C+ DLL R+G L A + + +P + A +W +LL+A GD +LG+ + +++L+
Sbjct: 384 CVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDS 443
Query: 412 NSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD 471
+ G+Y I SN+ A GRW E ++RK+M + GV K+PGCS IEV RVHEF AGD HP
Sbjct: 444 HGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPK 503
Query: 472 FDRLYQILCKINGQMKFAEHLQN 494
+++ + Q+K A ++ N
Sbjct: 504 SLDARRMVDGVIEQLKLAGYVPN 526
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/460 (38%), Positives = 259/460 (56%), Gaps = 3/460 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF + + ++ I Q+ A+ L++K+ +P+ F L A+
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALAS 328
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + G IH G+D DV + ++LI +Y C D R VFD + + NV WN
Sbjct: 329 LRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK--NVVCWN 386
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+MV GY+ G L LFEL+ EKN +SW T+IAGY + +Q + + +F + V P
Sbjct: 387 SMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTP 446
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++ + L ACA + +++ G +H I + G+ + + AL DMYAK G IG + QVF
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLV 327
E M K+ I+WT MI GLA G E+L +F MER + V PNE+ +++L AC H GLV
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLV 566
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YFN M+ YGI+PK + Y C++DLL R+G L EAE+ +R +PF+ A W +LL+
Sbjct: 567 DKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
Y D ++ E + L +L +NS Y +LSNIYA GRW + IRK+MR+ G+KK
Sbjct: 627 GCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKS 686
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
GCS++EV +VH F + D SH + +Y L + +MK
Sbjct: 687 GGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 179/379 (47%), Gaps = 37/379 (9%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
+V + I + A+ L+ ++ S +RP++ +F V++A +L LG I
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
V G + + V +LI + I AR+VFD + R +V W ++ Y + GD
Sbjct: 208 GLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR--DVVSWTAILDAYVETGD 265
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L AR +F+ M E+N ISW+ +IA Y+Q EA+ LF +M E KP+ LSA
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
A L A+ G IH ++ + G++ V + ++LID+Y K GK VF+ + K+V+ W
Sbjct: 326 LASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCW 385
Query: 280 TTMIAGLALHGLG-------------------------------REALDMFSRMERARVK 308
+M+ G +++G + L++F+ + +
Sbjct: 386 NSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT 445
Query: 309 PNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
PN+ TF ++L AC + ++ G + I+K GI+ I + D+ + G + ++
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKIIK--LGIQYDIFVGTALTDMYAKCGDIGSSK 503
Query: 368 KLLRRMPFEANAAIWGSLL 386
++ RMP E N W ++
Sbjct: 504 QVFERMP-EKNEISWTVMI 521
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 39/318 (12%)
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
SD+ V +I Y + AR +FDE+ R N W+ +++G K G + + FE
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMPER--NEVSWSALISGLMKYGRVEESMWYFE 142
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
+NV+SWT I+G+ + EA+ LF R+ V+P+++ + + AC +LG L
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 229 GEWIHNYIEQYGLNTIVPLNNALI-------------------------------DMYAK 257
G I + + G + ++N+LI D Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
+G + +A ++F+ M ++ I+W+ MIA + G EAL +FS+M + KPN F
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 318 LSACCHVGLVELGRRYFNIMK--SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
LSA + + G NI ++ GI+ + +IDL + G + +L+ +
Sbjct: 323 LSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLIL 378
Query: 376 EANAAIWGSLLAASNIYG 393
E N W S++ +I G
Sbjct: 379 EKNVVCWNSMVGGYSING 396
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 272/469 (57%), Gaps = 34/469 (7%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
++ +NT Q+ N A+ L + +++ + D+ + L A + I+LGREIH
Sbjct: 294 NIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIH 353
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
+ + D +V ALI MY+ CK
Sbjct: 354 GSAIRSFYDGVDNVKNALITMYSRCKY--------------------------------- 380
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L +A LF+ KN+I+W ++++GY MD+ EA LFR M + ++P+ + + + L
Sbjct: 381 LRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPL 440
Query: 220 CAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
CA++ ++ G+ H YI + G + L N+L+DMYA+SGK+ +A ++F+++ + +T
Sbjct: 441 CARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVT 500
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
+T++IAG + G GREAL +F M++ +KP+ +T +A+LSAC H GLV G + F +M
Sbjct: 501 YTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMP 560
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
S YGI P++E + CM+DL GRAG L +A++++ RMP+ ++A+W +LL A I+G+ E+G
Sbjct: 561 SAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIG 620
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 458
E A + L+++ P NSG Y +++N+YA G W++ K+R MRD+GV+K PGC++++V
Sbjct: 621 EWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGSG 680
Query: 459 VHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESDVASM 507
F+ DTS P ++LY +L + MK AE++ E G ++ + ++
Sbjct: 681 FFPFLVDDTSKPHVNKLYPLLEGLTELMKDAEYVGKENVGSVDDVIEAI 729
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 196/398 (49%), Gaps = 7/398 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G +Q+ ++ + + ++ A++I + + +N I + + A
Sbjct: 119 IISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEA 178
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y ++ +RPD +++P VLKA + I G+++H + L ++ V +L+ M
Sbjct: 179 LSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSM 238
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVI 176
YA + AR +F+ + R + WNTM++GYA G A LF M E N+I
Sbjct: 239 YAKTGELSTARCLFENMLER--DDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNII 296
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+W T+ G Q EA+ L M+ + D +A + L AC+ +GA++LG IH
Sbjct: 297 TWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSA 356
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ + + + NALI MY++ + A +F++ + K++ITW +M++G EA
Sbjct: 357 IRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEAS 416
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+F M + ++PN +T +IL C V ++ G+ + + R G + + + ++D+
Sbjct: 417 FLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDM 476
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
R+G + EA++L + + + SL+A I G+
Sbjct: 477 YARSGKVLEAKRLFDSIS-RRDEVTYTSLIAGYGIQGE 513
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 34/256 (13%)
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++ G+++H + G + +V L+ Y + + DA + +
Sbjct: 106 LKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITE------------- 152
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
N+ L L W LI+ Y + EA++ +++M + ++P
Sbjct: 153 -------------NSNILHPL-------PWNLLISSYVRNGLHGEALSAYKQMTHKGIRP 192
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D+ + L AC + + G+ +H I L + ++N+L+ MYAK+G++ A +F
Sbjct: 193 DKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLF 252
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
ENM + ++W TMI+G A G+ +EA ++F +M ++ N IT+ I C G E
Sbjct: 253 ENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFE 312
Query: 329 LGRRYFNIMKSRYGIE 344
+ M+S YGI+
Sbjct: 313 EALELLSHMRS-YGID 327
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 270/491 (54%), Gaps = 35/491 (7%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTD-NPLNAVILY 64
L+ ++H + I S L A +F DV +N +KA + N +L
Sbjct: 159 LNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLR 218
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ A+ P+ + VL A + LGR + + G+++D V +AL+ MY C
Sbjct: 219 DMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKC 278
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G++ AR +F+ + +K+V++W +I G
Sbjct: 279 ---------------------------------GEIAEARRVFDSIIDKDVVAWNAMITG 305
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ NEAI+LF M+ V PD+I + LSAC+ +GA+ELG + Y GL
Sbjct: 306 YAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNN 365
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + AL+DMYAK G + KA++VF M+ K+V +W +I GLA +G G EA+ F M
Sbjct: 366 VYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRN 425
Query: 305 AR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP++ITFI +LSAC H GLV+ G+R+FN + S + I PKIE Y CM+DLL R+G+L
Sbjct: 426 EDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHL 485
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+E + ++P + +A + G+LLAA +VE+GE + +I+LEP NS NY + S IY
Sbjct: 486 EEVWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIY 545
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A GR ++S K+R MR+ GV K PGCS++E+S +V EF AGD D +YQ+L +
Sbjct: 546 ASSGRLDDSAKMRGPMRERGVNKTPGCSWVEISGKVLEFYAGDEPQHGADDMYQVLDLLV 605
Query: 484 GQMKFAEHLQN 494
+M+ ++ N
Sbjct: 606 DEMRLEGYVPN 616
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 35/272 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ ++ + S + G A +F DV +N I Q A+ L+
Sbjct: 260 GMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLF 319
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ + + PD + VL A + +ELG E+ YASC
Sbjct: 320 HNMKKAGVCPDKITLAGVLSACSAVGALELGSEL--------------------DGYASC 359
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +Y+ NV V +V YAK GDL+ A +F M KNV SW LI G
Sbjct: 360 RGLYN-------------NVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICG 406
Query: 185 YAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLN 242
A Q +EAI F M+ E+ +KPD+I + LSAC G V+ G+ W ++ ++ +
Sbjct: 407 LAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQII 466
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
+ + ++D+ A+SG + + E + +K
Sbjct: 467 PKIEHYSCMVDLLARSGHLEEVWDFIEKIPDK 498
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H +E+ LN+ ++LI +Y+ G A +VF + ++ V++W M+ G+
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 293 REALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
E M M + V PN +T +L+AC G + LGR KS G+E
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSA-GMETDSLVGS 269
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
++ + + G + EA ++ + + + W +++
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSI-IDKDVVAWNAMITG 305
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 255/475 (53%), Gaps = 36/475 (7%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L R +C S+ + A +F + DV + I+ + N +A L+ +Q +
Sbjct: 300 LIRMYTTCGSI---EGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGI 356
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
+PD ++ ++ A + + REIH Q G +D+ V AL+ MYA C
Sbjct: 357 QPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKC-------- 408
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
G + +AR +F+ M ++V+SW+ +I Y +
Sbjct: 409 -------------------------GAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGT 443
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA F M+ N++PD + + L+AC LGA+++G I+ + L + VPL NALI
Sbjct: 444 EAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALI 503
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
M AK G + +A +F+ M + VITW MI G +LHG REAL +F RM + R +PN +
Sbjct: 504 IMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSV 563
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
TF+ +LSAC G V+ GRR+F + GI P ++ YGCM+DLLGRAG L EAE L++
Sbjct: 564 TFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKS 623
Query: 373 MPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNES 432
MP + ++IW SLL A I+G++++ E A + + ++P++ Y LS++YA G W
Sbjct: 624 MPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENV 683
Query: 433 GKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
K+RKVM G++K GC++IEV+ +VH FV D SHP +Y L ++ +K
Sbjct: 684 AKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIK 738
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 210/474 (44%), Gaps = 74/474 (15%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F DV +N + ++ + A L+ ++Q L+P+ SF +L
Sbjct: 207 GSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSIL 266
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ G+ +H Q + GL D+ V +LI+MY +C
Sbjct: 267 DGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTC------------------- 307
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
G + AR +F+ M ++V+SWT +I GYA+ +A LF MQ
Sbjct: 308 --------------GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
E ++PD I + ++ACA + IH+ ++ G T + ++ AL+ MYAK G I
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD 413
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A QVF+ M + V++W+ MI +G G EA + F M+R+ ++P+ +T+I +L+AC H
Sbjct: 414 ARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGH 473
Query: 324 VGLVELGRRYFN------------------IMKSRYG------------IEPKIEQYGCM 353
+G +++G + IM +++G + + + M
Sbjct: 474 LGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAM 533
Query: 354 IDLLGRAGYLQEAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIK--- 407
I G +EA L RM F N+ + +L+A + G V+ G +L++
Sbjct: 534 IGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRG 593
Query: 408 LEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGC-SYIEVSKRVH 460
+ P + + +LGR E + +++ M VK S + V+ R+H
Sbjct: 594 IVP----TVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIH 643
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 186/413 (45%), Gaps = 40/413 (9%)
Query: 2 IVRGLDQ-NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
I++G Q N + L+ I S G A IF V +N I Q + A
Sbjct: 83 IIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEA 142
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L+ ++ L P +F VL A + + G+E+H Q V G SD + AL+ M
Sbjct: 143 FALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSM 202
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y + DAR+VFD L +R +V+ +N MV GYAK GD W
Sbjct: 203 YVKGGSMDDARQVFDGLHIR--DVSTFNVMVGGYAKSGD------------------W-- 240
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+A LF RMQ +KP++I+ L+ L C A+ G+ +H G
Sbjct: 241 -----------EKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAG 289
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
L + + +LI MY G I A +VF+NMK + V++WT MI G A +G +A +F+
Sbjct: 290 LVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFA 349
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+ ++P+ IT++ I++AC + R + + + +G + + ++ + +
Sbjct: 350 TMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVST--ALVHMYAK 407
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAA--SNIYGDVELGECALQHLIKLEP 410
G +++A ++ MP + W +++ A N YG L +EP
Sbjct: 408 CGAIKDARQVFDAMP-RRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEP 459
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 121/223 (54%), Gaps = 10/223 (4%)
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDA---RKVFDEL--SLRVWNVAVWNTMVAGYAKVG 158
G +DS +V +++ C + DA ++V D + R N+ NT++ Y+ G
Sbjct: 52 GNHIDSRTYV-----KLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICG 106
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
++ AR +F+ + K V++W LIAGYAQ+ EA LFR+M E ++P I L+ L
Sbjct: 107 NVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLD 166
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
AC+ + G+ +H + G + + AL+ MY K G + A QVF+ + + V T
Sbjct: 167 ACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVST 226
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+ M+ G A G +A ++F RM++ +KPN+I+F++IL C
Sbjct: 227 FNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC 269
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 258/459 (56%), Gaps = 3/459 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF + + ++ I Q+ A+ L++K+ +P+ F L A+
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALAS 328
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + G IH G+D DV + ++LI +Y C D R VFD + + NV WN
Sbjct: 329 LRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK--NVVCWN 386
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+MV GY+ G L LFEL+ EKN +SW T+IAGY + +Q + + +F + V P
Sbjct: 387 SMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTP 446
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++ + L ACA + +++ G +H I + G+ + + AL DMYAK G IG + QVF
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLV 327
E M K+ I+WT MI GLA G E+L +F MER + V PNE+ +++L AC H GLV
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLV 566
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YFN M+ YGI+PK + Y C++DLL R+G L EAE+ +R +PF+ A W +LL+
Sbjct: 567 DKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
Y D ++ E + L +L +NS Y +LSNIYA GRW + IRK+MR+ G+KK
Sbjct: 627 GCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKS 686
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GCS++EV +VH F + D SH + +Y L + +M
Sbjct: 687 GGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 178/382 (46%), Gaps = 37/382 (9%)
Query: 33 FTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTI 92
F +V + I + A+ L+ ++ S +RP++ +F V++A +L
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 93 ELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVA 152
LG I V G + + V +LI + I AR+VFD + R +V W ++
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR--DVVSWTAILD 258
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
Y + GDL AR +F+ M E+N ISW+ +IA Y+Q EA+ LF +M E KP+
Sbjct: 259 AYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISC 318
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
LSA A L A+ G IH ++ + G++ V + ++LID+Y K GK VF+ +
Sbjct: 319 FACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLIL 378
Query: 273 NKSVITWTTMIAGLALHGLG-------------------------------REALDMFSR 301
K+V+ W +M+ G +++G + L++F+
Sbjct: 379 EKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNT 438
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+ + PN+ TF ++L AC + ++ G + I+K GI+ I + D+ +
Sbjct: 439 LLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIK--LGIQYDIFVGTALTDMYAKC 496
Query: 361 GYLQEAEKLLRRMPFEANAAIW 382
G + ++++ RMP E N W
Sbjct: 497 GDIGSSKQVFERMP-EKNEISW 517
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 39/318 (12%)
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
SD+ V +I Y + AR +FDE+ R N W+ +++G K G + + FE
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMPER--NEVSWSALISGLMKYGRVEESMWYFE 142
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
+NV+SWT I+G+ + EA+ LF R+ V+P+++ + + AC +LG L
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 229 GEWIHNYIEQYGLNTIVPLNNALI-------------------------------DMYAK 257
G I + + G + ++N+LI D Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
+G + +A ++F+ M ++ I+W+ MIA + G EAL +FS+M + KPN F
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 318 LSACCHVGLVELGRRYFNIMK--SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
LSA + + G NI ++ GI+ + +IDL + G + +L+ +
Sbjct: 323 LSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLIL 378
Query: 376 EANAAIWGSLLAASNIYG 393
E N W S++ +I G
Sbjct: 379 EKNVVCWNSMVGGYSING 396
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 269/464 (57%), Gaps = 2/464 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+ S +S G + F +V +N+ I Q + L+ +++ D
Sbjct: 153 LLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLED 212
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ +L A + +E+GR +HC+ + +G D+ + +AL+ MY C ++ AR+ F+
Sbjct: 213 EFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFE 272
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ ++ +V W +M+ K G +N AR F+ M E+N++SW +I+ Y Q Q +EA+
Sbjct: 273 MMPIK--SVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEAL 330
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L+ +MQ + + PDEI ++A LSA ++G + +G+ +H YI N V L N+L+DMY
Sbjct: 331 DLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMY 390
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G++ A+ +F M N++V++W +I GLA+HG + + F M P+ ITF+
Sbjct: 391 AKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFV 450
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
A+LSAC H GL+E G+ YF M+ Y ++ ++E Y CM+DLLGR G+L++A L++ MP
Sbjct: 451 ALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPM 510
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ + +WG+LL A I+G+V++G ++ L++LE + G + ++SN+ +W + ++
Sbjct: 511 KPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRL 570
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
RK+M++ G +K G S IE++ +HEF D H +Y ++
Sbjct: 571 RKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSSEIYAVV 614
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 175/398 (43%), Gaps = 68/398 (17%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
+A +F PD +YNT I+A C + P A+ L+ + + P+ ++ PFV+KA
Sbjct: 64 HARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACT 123
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
E +H + GL V V AL+ YAS + D+R+ FDE+ R NV W
Sbjct: 124 IAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDR--NVVSW 181
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N+M+ GYA+ GD E +LF M+ +
Sbjct: 182 NSMIGGYAQAGD-------------------------------TREVCSLFGEMRRQGFL 210
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
DE +++ L AC+Q G +E+G +H + G + L +AL+DMY K G + A +
Sbjct: 211 EDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRC 270
Query: 268 FENMKNKSVITWTTMIAGLALH-------------------------------GLGREAL 296
FE M KSV++WT+M+ H G EAL
Sbjct: 271 FEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEAL 330
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMID 355
D++++M+ + P+EIT +A+LSA +G + +G+ + I + Y P + ++D
Sbjct: 331 DLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIY--NPDVSLVNSLLD 388
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + G + A L M N W ++ ++G
Sbjct: 389 MYAKCGQVDTAISLFSEM-CNRNVVSWNVIIGGLAMHG 425
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 170/366 (46%), Gaps = 14/366 (3%)
Query: 112 HVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY---AKVGD--LNNARAL 166
H + +L ++ C+ I ++ L + A + ++A Y AK G L +AR L
Sbjct: 9 HHLPSLQKLLRQCRSIQRLNQLHAHLLVHGSLSAASDLLLASYCALAKAGHGVLCHARRL 68
Query: 167 FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV 226
F+ + + + + T+I Y P EA+ L R M + P+E + + AC A
Sbjct: 69 FDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAR 128
Query: 227 ELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 286
E +H + GL V + NAL+ YA +G +G + + F+ M +++V++W +MI G
Sbjct: 129 EHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGY 188
Query: 287 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEP 345
A G RE +F M R +E T +++L AC G +E+GR + ++ S ++
Sbjct: 189 AQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDL 248
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+E ++D+ G+ G L A + MP ++ + W S+L A +G V C H
Sbjct: 249 ILES--ALVDMYGKCGDLWMARRCFEMMPIKSVVS-WTSMLCAQTKHGSVNAARCWFDH- 304
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV--KKMPGCSYIEVSKRVHEFV 463
+ N ++ + + Y G+ +E+ + M+ G+ ++ + + S R+ +
Sbjct: 305 --MPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLT 362
Query: 464 AGDTSH 469
G H
Sbjct: 363 VGKMVH 368
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 270/493 (54%), Gaps = 16/493 (3%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L HL + + + ++LG +A +F P + +A + A+ ++
Sbjct: 43 LHAGAHLPTALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFR 102
Query: 66 KIQASALRPDNYSFPFV---------LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ A + PDN + L A + G+ +H V +G+ DV V
Sbjct: 103 DMIADGVLPDNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTE 162
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI++Y + +R++FD + +R + WN MV Y + ++ +A LF M ++V+
Sbjct: 163 LIRVYGEYGELALSRRLFDAMPVR--STVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVV 220
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVEN---VKPDEIAMLAALSACAQLGAVELGEWIH 233
SW T+IAGY+ + + EA+ L R+M + V P+ M L+ACA G +E G W+H
Sbjct: 221 SWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVH 280
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHGLG 292
++++ +N L+ +LIDMY K G I KALQVFE + + +WTTMI GLA+HG
Sbjct: 281 AFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHGRA 340
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
+AL MF M+ + P+++T + +L+AC H GLV+ G R+F ++ +Y I PKIE YGC
Sbjct: 341 ADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDEGLRHFYSLE-KYAITPKIEHYGC 399
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
+IDLLGR G LQEA ++R M + NA IWG+ L A ++ +VELGE A L +L+P +
Sbjct: 400 VIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPGD 459
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
+LS++YA L WN + R+ M ++ +KK PGCS IE+ VHEFVAG HP
Sbjct: 460 PWAKVMLSSLYAKLQDWNSLARERREMNNLQIKKTPGCSSIELDGEVHEFVAGGFQHPQH 519
Query: 473 DRLYQILCKINGQ 485
+ +L + Q
Sbjct: 520 GEICTVLENVEAQ 532
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 80/342 (23%)
Query: 97 EIHCQTVGTGL-DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
EIH GL + H+ AL+ YA+
Sbjct: 32 EIHGLLFKEGLLHAGAHLPTALLSAYAA-------------------------------- 59
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA--- 212
+G +AR LF+ M + ++S T + +A Q +A+ +FR M + V PD +A
Sbjct: 60 -LGRPRHARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAV 118
Query: 213 ------MLAALSACAQLGAVELGEWIHNYI-------------------EQYG------- 240
A+L A A G+ +H I +YG
Sbjct: 119 ALAACHTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRR 178
Query: 241 LNTIVPLN-----NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
L +P+ NA++ Y + +G A ++F M + V++W TMIAG +L G EA
Sbjct: 179 LFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEA 238
Query: 296 LDMFSRM---ERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQYG 351
L++ +M V PN T +L+AC G +E G + + ++R + +++
Sbjct: 239 LELSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDR-- 296
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G +++A ++ + P + W +++ ++G
Sbjct: 297 SLIDMYVKCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHG 338
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 255/468 (54%), Gaps = 34/468 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA-LRPDNYSFPFVLKAVV 87
A +F V + T I Q D P AV L++++ S ++P+ + VL A
Sbjct: 139 ARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACA 198
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+ + + + IH G V + L+ +Y C C+
Sbjct: 199 RARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV-------------------- 238
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
AR LF+ EKN+ SW +I G+ + EA+ LFR MQ + +K
Sbjct: 239 -------------QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIK 285
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D++ M + L AC LGA+ELG+W+H YI++ ++ V L AL+DMYAK G I A+QV
Sbjct: 286 GDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQV 345
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F M K V+TWT +I GLA+ G AL F M VKP+ ITF+ +L+AC H G V
Sbjct: 346 FHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFV 405
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G +FN M YGI+P IE YG ++D+LGRAG + EAE+L++ MP + + G LL
Sbjct: 406 DEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLG 465
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A I+G++E E A + L++++P++SG Y +LSNIY +W E+ + R++M + G++K
Sbjct: 466 ACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKP 525
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
PGCS IEV VHEFV GD+SH + ++L + ++K A ++ ++
Sbjct: 526 PGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDK 573
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 194/399 (48%), Gaps = 41/399 (10%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS--SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+ GL + S+ + CS G YA +F+ P Y N+ I+ +
Sbjct: 11 MLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQ 70
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
A++ Y ++ L PD Y+FP + K+ S G++IHC + G SD + L+
Sbjct: 71 EALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLM 127
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY++C C+ ARKVFD++ + V W TM+ +
Sbjct: 128 NMYSNCGCLVSARKVFDKMEDKT--VVSWATMIGVH------------------------ 161
Query: 179 TTLIAGYAQMDQPNEAITLFRR-MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
AQ DQPNEA+ LF R M+ ENVKP+E+ ++ L+ACA+ + + + IH YI+
Sbjct: 162 -------AQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYID 214
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
++G V LN L+D+Y K G + A +F+ + K++ +W MI G EAL
Sbjct: 215 EHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALL 274
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M+ +K +++T ++L AC H+G +ELG+ +K + I+ + ++D+
Sbjct: 275 LFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQR-IDVDVALGTALVDMY 333
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G ++ A ++ MP E + W +L+ + G E
Sbjct: 334 AKCGSIETAIQVFHEMP-EKDVMTWTALILGLAMCGQAE 371
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 34/257 (13%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D G A +F + +++ +N I + N A++L+ ++Q ++ D
Sbjct: 228 LMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGD 287
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ +L A L +ELG+ +H +D DV + AL+ MYA C I A +VF
Sbjct: 288 KVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFH 347
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
E+ + +V W ++ G A G Q A+
Sbjct: 348 EMPEK--DVMTWTALILGLAMCG-------------------------------QAENAL 374
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDM 254
F M ++ VKPD I + L+AC+ G V+ G ++ + YG+ + L+D+
Sbjct: 375 QYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDI 434
Query: 255 YAKSGKIGKALQVFENM 271
++G+I +A ++ ++M
Sbjct: 435 LGRAGRIAEAEELIKSM 451
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/459 (38%), Positives = 251/459 (54%), Gaps = 27/459 (5%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F DV + T I Q A+ +Y + + P+ ++
Sbjct: 265 GLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLV 324
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC-----KCIYDARKVFDELS 138
A + + I G ++H V G D + +I YA+C C+ V D L
Sbjct: 325 SACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLE 384
Query: 139 LRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLF 198
WN + AG+ K G +++A F+ M ++V SW+T+I+GYAQ + P A+ LF
Sbjct: 385 -------SWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELF 437
Query: 199 RRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS 258
+M +KP+E+ M++ SA A LG ++ G+ H Y+ + L ALIDMYAK
Sbjct: 438 HKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKC 497
Query: 259 GKIGKALQVFENMKNK--SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
G I ALQ F ++++ SV W +I GLA HG L++FS M+R +KPN ITFI
Sbjct: 498 GSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIG 557
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+LSACCH GLVE G+R F MKS Y +EP I+ YGCMID+LGRAG L+EAE+++R MP E
Sbjct: 558 VLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPME 617
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
A+ IWG+LLAA +G+V +GE A ++L +L P + G +LSNIYA G+W E +R
Sbjct: 618 ADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVR 677
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
VM+ + + PG S FVAG D DR+
Sbjct: 678 SVMQGQTMDREPGYS---------GFVAGS----DLDRM 703
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 35/403 (8%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D A +F Y T I Q A+ ++ +++ + P++ + V+ A
Sbjct: 136 DNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISAC 195
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
L + R +H V + V V L+ Y C + +AR++FDE+ R N+
Sbjct: 196 SHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPER--NLVT 253
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
WN M+ GYAK G ++ AR LF+ + +K+VISW T+I GY Q + EA+ ++R M
Sbjct: 254 WNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGH 313
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN-------TIVPLN----------- 248
P+E+ ++ +SAC + A+ G +H + + G + TI+
Sbjct: 314 GPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACL 373
Query: 249 -------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
NAL + K+G + AL+ F+ M + V +W+TMI+G A + A
Sbjct: 374 QFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMA 433
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L++F +M +KPNE+T +++ SA +G ++ G+ M+S I +ID
Sbjct: 434 LELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSE-SIPFNDNLRAALID 492
Query: 356 LLGRAGYLQEAEKLLRRMPFE-ANAAIWGSLLAASNIYGDVEL 397
+ + G + A + ++ E ++ + W +++ +G +
Sbjct: 493 MYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASM 535
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 35/271 (12%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
LK+ LS I GR+IH GL + + +LI MYA C I +A+ +FD +
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFA--TL 117
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
+ N MV+GY + G ++NAR LF++M K +S+TT+I G+ Q EA+ +F+ M+
Sbjct: 118 DSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMR 177
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY---GLNTIVPLN----------- 248
V P+++ ++ +SAC+ LG V +H + + GL IV N
Sbjct: 178 SCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGL-VIVSTNLMHAYCLCSGV 236
Query: 249 ------------------NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
N +++ YAK+G + +A ++F+ + +K VI+W TMI G G
Sbjct: 237 REARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKG 296
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSAC 321
REAL+++ M + PNE+ + ++SAC
Sbjct: 297 RLREALEIYRAMLQTGHGPNEVMIVNLVSAC 327
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 191 PNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
P I +F + +N E+A+++AL +C+ L + G IH+ I + GL+ + N
Sbjct: 33 PQHFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQN 92
Query: 250 ALIDMYAK-------------------------------SGKIGKALQVFENMKNKSVIT 278
+LI+MYAK +G+I A ++F+ M NK ++
Sbjct: 93 SLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVS 152
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
+TTMI G +G REAL++F M V PN++T + ++SAC H+G V R ++
Sbjct: 153 YTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVV 212
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
+ + I M +G ++EA +L MP E N W +L N Y L
Sbjct: 213 KMFVVGLVIVSTNLMHAYCLCSG-VREARRLFDEMP-ERNLVTWNVML---NGYAKTGLV 267
Query: 399 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+ A + + + ++ + + Y GR E+ +I + M G
Sbjct: 268 DEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTG 312
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 256/441 (58%), Gaps = 4/441 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNP-LNAVILYNKIQASALRPDNYSFPFVLKAVV 87
A F + D++LY+ + A+ + +P L +L + ALRPD++ + A
Sbjct: 55 ARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRPDHFVLASLASAAG 114
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+L ++ LGR++H + +D V ++LI MY C DARKVFD S+ V N VW
Sbjct: 115 RLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFD--SIGVKNSVVW 172
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+++GYA G A LF+ M + +WT LI+G+ + A+ LF M+ ++++
Sbjct: 173 TALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIR 232
Query: 208 -PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D + + A L A+ LG +H ++ + G + + + NAL+DMY+K I A +
Sbjct: 233 IHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSARE 292
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VFE + + VI+WTT++ G A HG E +++RM A +KPNE+TF+ ++ AC H GL
Sbjct: 293 VFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGL 352
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ GR+ F+ MK YG++P ++ Y C +DLL R+GYL EAEKL+ MP+E + A WG+LL
Sbjct: 353 VQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALL 412
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+A + D ++ +L++L P + Y +LSN+YA+ +W+ K+RK+M +M ++K
Sbjct: 413 SACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRK 472
Query: 447 MPGCSYIEVSKRVHEFVAGDT 467
+PG S++E + F AG+
Sbjct: 473 VPGYSWVEAGRESRIFHAGEV 493
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 257/459 (55%), Gaps = 3/459 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF + + ++ I Q+ A+ L++K+ +P+ F L A+
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALAS 328
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L + G IH G+D DV + ++LI +Y C D R VFD + + NV WN
Sbjct: 329 LRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK--NVVCWN 386
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
+MV GY+ G L LFEL+ EKN SW T+JAGY + +Q + + +F + V P
Sbjct: 387 SMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTP 446
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++ + L ACA + +++ G +H I + G+ + + AL DMYAK G IG + QVF
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLV 327
E M K+ I+WT MI GLA G E+L +F MER + V PNE+ +++L AC H GLV
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLV 566
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YFN M+ YGI+PK + Y C++DLL R+G L EAE+ +R +PF+ A W +LL+
Sbjct: 567 DKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
Y D ++ E + L +L +NS Y +LSNIYA GRW + IRK+MR+ G+KK
Sbjct: 627 GCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKS 686
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
GCS++EV +VH F + D SH D +Y L + +M
Sbjct: 687 GGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 178/382 (46%), Gaps = 37/382 (9%)
Query: 33 FTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTI 92
F +V + I + A+ L+ ++ S +RP++ +F V++A +L
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 93 ELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVA 152
LG I V G + + V +LI + I AR+VFD + R +V W ++
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR--DVVSWTAILD 258
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
Y + GDL AR +F+ M E+N ISW+ +IA Y+Q EA+ LF +M E KP+
Sbjct: 259 AYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISC 318
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
LSA A L A+ G IH ++ + G++ V + ++LID+Y K GK VF+ +
Sbjct: 319 FACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLIL 378
Query: 273 NKSVITWTTMIAGLALHGLG-------------------------------REALDMFSR 301
K+V+ W +M+ G +++G + L++F+
Sbjct: 379 EKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNT 438
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+ + PN+ TF ++L AC + ++ G + I+K GI+ I + D+ +
Sbjct: 439 LLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIK--LGIQYDIFVGTALTDMYAKC 496
Query: 361 GYLQEAEKLLRRMPFEANAAIW 382
G + ++++ RMP E N W
Sbjct: 497 GDIGSSKQVFERMP-EKNEISW 517
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 39/318 (12%)
Query: 109 SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE 168
SD+ V +I Y + AR +FDE+ R N W+ +++G K G + + FE
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMPER--NEVSWSALISGLMKYGRVEESMWYFE 142
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
+NV+SWT I+G+ + EA+ LF R+ V+P+++ + + AC +LG L
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 229 GEWIHNYIEQYGLNTIVPLNNALI-------------------------------DMYAK 257
G I + + G + ++N+LI D Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 258 SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAI 317
+G + +A ++F+ M ++ I+W+ MIA + G EAL +FS+M + KPN F
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 318 LSACCHVGLVELGRRYFNIMK--SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
LSA + + G NI ++ GI+ + +IDL + G + +L+ +
Sbjct: 323 LSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLIL 378
Query: 376 EANAAIWGSLLAASNIYG 393
E N W S++ +I G
Sbjct: 379 EKNVVCWNSMVGGYSING 396
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 231/357 (64%), Gaps = 9/357 (2%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N +V YAK G + A +FE MT+K+VISWT+L+ G EA+ LF M++ +
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PD+I + A LSACA+L +E G+ +H + GL + + ++N+L+ MYAK G I A +V
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F++M+ + VITWT +I G A +G GRE+L+ ++ M + VKP+ ITFI +L AC H GLV
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLV 185
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E GR YF M+ YGI+P E Y CMIDLLGR+G L EA++LL +M + +A +W +LLA
Sbjct: 186 EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLA 245
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A ++G+VELGE A +L +LEP N+ Y +LSN+Y+ G+W E+ K R++M+ GV K
Sbjct: 246 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKE 305
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ------ILCKING---QMKFAEHLQNE 495
PGCS+IE+S +VH F++ D SHP +Y IL K G M FA H +E
Sbjct: 306 PGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDE 362
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 155/360 (43%), Gaps = 72/360 (20%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+D + G+ DYA+ +F + DV + + + + A+ L+ +++ + PD
Sbjct: 8 LVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPD 67
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
VL A +L+ +E G+++H + +GL S
Sbjct: 68 QIVIAAVLSACAELTVLEFGKQVHANFLKSGLGS-------------------------- 101
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+++V N++V+ YAK G + +A +F+ M ++VI+WT LI GYAQ + E++
Sbjct: 102 -------SLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESL 154
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLNTIVPLNNALIDM 254
+ M VKPD I + L AC+ G VE G + + E YG+ +ID+
Sbjct: 155 NFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDL 214
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
+SGK+ +A ++ M V+P+ +
Sbjct: 215 LGRSGKLMEAKELLNQMA----------------------------------VQPDATVW 240
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPK-IEQYGCMIDLLGRAGYLQEAEKLLRRM 373
A+L+AC G VELG R N + + +EPK Y + +L AG +EA K R M
Sbjct: 241 KALLAACRVHGNVELGERAANNL---FELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLM 297
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+NNAL+DMYAK G A VFE M +K VI+WT+++ G +G EAL +F M
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 307 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ P++I A+LSAC + ++E G++ + N +KS G ++ ++ + + G +++
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKCGCIED 121
Query: 366 AEKLLRRMPFEANAAIWGSLL 386
A K+ M + + W +L+
Sbjct: 122 ANKVFDSMEIQ-DVITWTALI 141
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 13/210 (6%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L +N L+S + + G + A +F DV + I Q ++ YN
Sbjct: 103 LSVDNSLVSMY----AKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYN 158
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT--GLDSDVHVVAALIQMYAS 123
+ AS ++PD +F +L A +E GR + Q++ G+ A +I +
Sbjct: 159 BMIASGVKPDFITFIGLLFACSHAGLVEHGRS-YFQSMEEVYGIKPGPEHYACMIDLLGR 217
Query: 124 CKCIYDARKVFDELSLR----VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
+ +A+++ ++++++ VW + V G ++G+ A LFEL KN + +
Sbjct: 218 SGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGE-RAANNLFEL-EPKNAVPYV 275
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
L Y+ + EA R M++ V +
Sbjct: 276 LLSNLYSAAGKWEEAAKTRRLMKLRGVSKE 305
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 272/476 (57%), Gaps = 39/476 (8%)
Query: 5 GLDQNNHLLSRFIDS---CSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
GL N + + FI + C +L S+ + + K+ V +N + Q +P A+
Sbjct: 337 GLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKT---VSSWNALLCGYAQNSDPRKAL 393
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY ++ S L PD ++ +L A ++ ++ G EIH + GL D + +L+ +Y
Sbjct: 394 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY 453
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G A+ LF+ M ++++SW +
Sbjct: 454 ICC---------------------------------GKPFAAQVLFDGMEHRSLVSWNVM 480
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
IAGY+Q P+EAI LFR+M + ++P EIA++ AC+QL A+ LG+ +H + + L
Sbjct: 481 IAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHL 540
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ +++++IDMYAK G IG + ++F+ ++ K V +W +IAG +HG G+EAL++F +
Sbjct: 541 TEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEK 600
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M R +KP++ TF IL AC H GLVE G YFN M + + IEPK+E Y C++D+LGRAG
Sbjct: 601 MLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAG 660
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
+ +A +L+ MP + ++ IW SLL++ I+G++ LGE L++LEP NY ++SN
Sbjct: 661 RIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISN 720
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQ 477
++A G+W++ ++R M+D+G++K GCS+IEV +VH F+ GD P+ + + +
Sbjct: 721 LFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRE 776
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 172/388 (44%), Gaps = 52/388 (13%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK-IQAS 70
L +R I S G + +F + +++ +N + A + + +A+ ++++ I +
Sbjct: 36 LNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVT 95
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
+PDN++ P V+KA L + LG+ IH L SDV V ALI MY C + +A
Sbjct: 96 EHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA 155
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
KVF+ + R N+ WN+++ G+++ G L
Sbjct: 156 VKVFEHMPER--NLVSWNSIICGFSENGFL------------------------------ 183
Query: 191 PNEAITLFRRMQV--ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
E+ FR M V E+ PD ++ L CA +E G +H + GLN + +N
Sbjct: 184 -QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERAR 306
N+LIDMY+K + +A +F+ K++++W +MI G A + +M E A+
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKS------RYGIEPKIEQYGCMIDLLGRA 360
+K +E T + +L C L R +K R+G++ I R
Sbjct: 303 MKADEFTILNVLPVC-------LERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRC 355
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G L +E++ M + ++ W +LL
Sbjct: 356 GALCSSERVFDLMDTKTVSS-WNALLCG 382
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 146/329 (44%), Gaps = 38/329 (11%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK--IQASALRPDNYSFPF 81
G + A +F H + ++ +N+ I + + + + + + PD +
Sbjct: 150 GLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVT 209
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL IE G +H V GL+ ++ V +LI MY+ C+
Sbjct: 210 VLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRF--------------- 254
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
L+ A+ LF+ +KN++SW ++I GYA+ + L ++M
Sbjct: 255 ------------------LSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKM 296
Query: 202 QVEN--VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
Q E+ +K DE +L L C + ++ + +H Y ++GL + + NA I Y + G
Sbjct: 297 QTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCG 356
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ + +VF+ M K+V +W ++ G A + R+ALD++ +M + + P+ T ++L
Sbjct: 357 ALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 416
Query: 320 ACCHVGLVELGRRYFNI-MKSRYGIEPKI 347
AC + + G +++ ++P I
Sbjct: 417 ACSRMKSLHYGEEIHGFALRNGLAVDPFI 445
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 114 VAALIQMYASCKCIYDARKVFDELS--LRVWNVAVWNT-MVAGYAKVGDLNNARALFELM 170
+ L+Q K I R++ + +S + N V NT ++ Y+ G +++R +F+ +
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELG 229
KN+ W +++ Y + + +A+++F + V KPD + + ACA L + LG
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 230 EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALH 289
+ IH + L + V + NALI MY K G + +A++VFE+M +++++W ++I G + +
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180
Query: 290 GLGREALDMFSRM---ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPK 346
G +E+ + F M E + V P+ T + +L C +E G + + G+ +
Sbjct: 181 GFLQESFNAFREMLVGEESFV-PDVATLVTVLPVCAGEEDIEKGMAVHG-LAVKLGLNEE 238
Query: 347 IEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ +ID+ + +L EA+ L + + N W S++
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGG 279
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 262/473 (55%), Gaps = 1/473 (0%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I + +G D A + +V + I + AV +N + + + PD
Sbjct: 178 ISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDE 237
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ +L A +L + G +H + +V ALI MYA C AR+VFD
Sbjct: 238 VTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDA 297
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
L R WN M+ GY KVG ++ AR+LF+ M + +VI++ +LI GY + EA+
Sbjct: 298 LG-RGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALL 356
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
LF +M+ + D M+ L+A A LGA+ G +H IEQ + V L AL+DMY
Sbjct: 357 LFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYM 416
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K G++ +A+ F+ M + V TW+ MI GLA +G+G+ AL+ F M+ N +T+IA
Sbjct: 417 KCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIA 476
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
+L+AC H L++ GR YF+ M+ + I P+IE YGCMIDLLGR+G L EA L++ MP +
Sbjct: 477 VLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQ 536
Query: 377 ANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIR 436
NA IW S+L+A ++ +V+L + A HL+KLEP Y + NIY +W ++ KIR
Sbjct: 537 PNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIR 596
Query: 437 KVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++M GVKK G S I V+ +VH+F+ GD SHP + ++ +I ++K A
Sbjct: 597 RLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSA 649
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 204/414 (49%), Gaps = 43/414 (10%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQ-TDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA S+F + +L++T ++A + + P +ILY ++ + PD ++F F+ K
Sbjct: 55 YALSLFD-RMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCC 113
Query: 87 VKLST-IELGREIHCQTVGTGLDSDVHVVAA-LIQMYASCKCIYDARKVFDELSLRVWNV 144
+ + LGR +H T L S V ++A+ +I MYA DAR+ FDE S++ +V
Sbjct: 114 ARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVK--DV 171
Query: 145 AVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE 204
W T+++G AK+G L++AR L +NV++WT LI+GY++ + EA+ F M +
Sbjct: 172 VAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSD 231
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKA 264
+ PDE+ ++ LSAC QL + G +H + + L ALIDMYAK G G+A
Sbjct: 232 GIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRA 291
Query: 265 LQV--------------------------------FENMKNKSVITWTTMIAGLALHGLG 292
+V F+ M++ VIT+ ++I G G
Sbjct: 292 REVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRL 351
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
REAL +F++M R + + T + +L+A +G + GR ++ R +E +
Sbjct: 352 REALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRL-VERDVYLGTA 410
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI 406
++D+ + G ++EA ++M + W +++ G +G+ AL+H
Sbjct: 411 LLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMIGGLAFNG---MGKAALEHFF 460
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 39/319 (12%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L A +LF+ M + T L A + P+ I L+RRM +V PD
Sbjct: 53 LRYALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKC 112
Query: 220 CAQLGA-VELGEWIHNYIEQYGLNTIVPL-NNALIDMYAKSGKIGKALQVFENMKNKSVI 277
CA+ GA V LG +H + L + VPL + +I MYA+ G G A + F+ K V+
Sbjct: 113 CARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVV 172
Query: 278 TWTTMIAGLALHGL-----------------------------GR--EALDMFSRMERAR 306
WTT+I+GLA GL GR EA+D F+ M
Sbjct: 173 AWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDG 232
Query: 307 VKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ P+E+T I +LSAC + + G + + R + K+ +ID+ + G
Sbjct: 233 IAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKL--VVALIDMYAKCGDTGR 290
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A ++ + W +++ G V++ ++E H+ + L Y
Sbjct: 291 AREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFD---QMEDHDVITFNSLITGYIH 347
Query: 426 LGRWNESGKIRKVMRDMGV 444
GR E+ + MR G+
Sbjct: 348 GGRLREALLLFTKMRRHGL 366
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 275/478 (57%), Gaps = 42/478 (8%)
Query: 15 RFIDSCSSLGFSDYAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
R +S S + YA ++ P D + YN I+ + P A+ L++ + + +
Sbjct: 37 RCANSSSPPDTARYAAAVLLRFPIPGDPFPYNAVIRHVA-LHAPSLALALFSHMHRTNVP 95
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKV 133
D+++FP +LK+ KL+ HC +H + + ++
Sbjct: 96 FDHFTFPLILKSS-KLNP-------HC----------IHTLVLKLGFHS----------- 126
Query: 134 FDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE 193
N+ V N ++ Y G L+ + LF+ M +++ISW++LI+ +A+ P+E
Sbjct: 127 ---------NIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDE 177
Query: 194 AITLFRRMQVE--NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
A+TLF++MQ++ ++ PD + ML+ +SA + LGA+ELG W+H +I + G+N V L +AL
Sbjct: 178 ALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSAL 237
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMY++ G I ++++VF+ M +++V+TWT +I GLA+HG GREAL+ F M + +KP+
Sbjct: 238 IDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDR 297
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
I F+ +L AC H GLVE GRR F+ M S YGIEP +E YGCM+DLLGRAG + EA +
Sbjct: 298 IAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVE 357
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
M N+ IW +LL A + + L E A + + +L+PH+ G+Y +LSN Y +G W +
Sbjct: 358 GMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVK 417
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
+R MR+ + K PG S + + + HEFV+GD SHP ++ + + L + +K
Sbjct: 418 KEGVRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLG 475
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 283/493 (57%), Gaps = 7/493 (1%)
Query: 2 IVRGLDQ-NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++R L Q + ++ S I+ + G A +F + + I Q + +
Sbjct: 286 VIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS 345
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+N+++A + D ++ ++ + LGR++H + +G + + V +LI +
Sbjct: 346 VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISL 405
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + +A VF +S R ++ W +M+ Y+++G++ AR F+ M +N I+W
Sbjct: 406 YAKCGDLQNAEFVFSSMSER--DIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNA 463
Query: 181 LIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++ Y Q + + ++ M ++V PD + + CA +GA +LG+ I + +
Sbjct: 464 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA 523
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL V + NA I MY+K G+I +A ++F+ + K V++W MI G + HG+G++A F
Sbjct: 524 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 583
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M KP+ I+++A+LS C H GLV+ G+ YF++M +GI P +E + CM+DLLGR
Sbjct: 584 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 643
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG+L EA+ L+ +MP + A +WG+LL+A I+G+ EL E A +H+ +L+ +SG+Y +L
Sbjct: 644 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLL 703
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ IY+ G+ ++S ++RK+MRD G+KK PG S++EV +VH F A D SHP ++ I
Sbjct: 704 AKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHP---QVIAIR 760
Query: 480 CKINGQMKFAEHL 492
K++ M+ HL
Sbjct: 761 NKMDELMEKIAHL 773
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 66/376 (17%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D+A F ++ DV +N I AL Q+ A+ L ++ +R D+ ++ L A
Sbjct: 211 DHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTAC 270
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L ++ G+++H + + + D +V +ALI++YA C +A++VF+ L
Sbjct: 271 ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-------- 322
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
++N +SWT LI G Q + ++++ LF +M+ E +
Sbjct: 323 -------------------------DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 357
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D+ A+ +S C + LG +H+ + G N + ++N+LI +YAK G + A
Sbjct: 358 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 417
Query: 267 VFENMKNKSVITWTTMIA----------------GLAL---------------HGLGREA 295
VF +M + +++WT+MI G+A HG +
Sbjct: 418 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 477
Query: 296 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
L M+S M + V P+ +T++ + C +G +LG + + G+ + I
Sbjct: 478 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVSVANAAI 536
Query: 355 DLLGRAGYLQEAEKLL 370
+ + G + EA+KL
Sbjct: 537 TMYSKCGRISEAQKLF 552
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 201/399 (50%), Gaps = 25/399 (6%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N LL ++ SC +L SD + +P+V +N + + + +A L++++
Sbjct: 58 QNTLLHAYL-SCGAL--SDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP 114
Query: 69 ASALRPDNYSFPFVLKAVVK-----LSTIELG-REIHCQTVGT----GLDSDVHVVAALI 118
R D S+ ++ + +S LG RE+ Q +G D V AL+
Sbjct: 115 ----RRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 170
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
M+ C + A ++F ++ + N+M+AGYAK+ +++A FE M E++V+SW
Sbjct: 171 DMFVRCGYVDFASRLFSQIERP--TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 228
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
+IA +Q + EA+ L M + V+ D ++L+ACA+L ++ G+ +H + +
Sbjct: 229 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 288
Query: 239 YGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
L I P + +ALI++YAK G +A +VF ++++++ ++WT +I G + ++++
Sbjct: 289 -SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVE 347
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI-MKSRYGIEPKIEQYGCMIDL 356
+F++M + ++ ++S C + + LGR+ ++ +KS G I +I L
Sbjct: 348 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKS--GHNRAIVVSNSLISL 405
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDV 395
+ G LQ AE + M E + W S++ A + G++
Sbjct: 406 YAKCGDLQNAEFVFSSMS-ERDIVSWTSMITAYSQIGNI 443
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 25/311 (8%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + V GL S V + L+ Y SC + DAR++ ++ NV N M+ GYA
Sbjct: 40 RALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLL-RADIKEPNVITHNIMMNGYA 98
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQ-------------MDQPNEAITLFRRMQ 202
K G L++A LF+ M ++V SW TL++ ++ + + + LF +
Sbjct: 99 KQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFD 158
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
E A++ C G V+ + + IE+ + N+++ YAK I
Sbjct: 159 FWGDPDVETALVDMFVRC---GYVDFASRLFSQIER----PTIFCRNSMLAGYAKLYGID 211
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
A++ FE+M + V++W MIA L+ G REAL + M R V+ + T+ + L+AC
Sbjct: 212 HAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACA 271
Query: 323 HVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
+ + G++ + +++S I+P + +I+L + G +EA+++ + + N+
Sbjct: 272 RLFSLGWGKQLHAKVIRSLPQIDPYVAS--ALIELYAKCGSFKEAKRVFNSLQ-DRNSVS 328
Query: 382 WGSLLAASNIY 392
W L+ S Y
Sbjct: 329 WTVLIGGSLQY 339
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 281/496 (56%), Gaps = 12/496 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N ++S + + SLG S + +P+ + + + + +
Sbjct: 193 MFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDET 252
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ ++ + + VL ++ ++ G+EIH V G + + V ALI
Sbjct: 253 LELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGT 312
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK------- 173
Y + + DA KVF E+ + N+ WN +++ YA+ G + A A F M +
Sbjct: 313 YGKHQHMGDAHKVFLEIKNK--NLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSL 370
Query: 174 ---NVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
NVISW+ +I+G+A + +++ LFR+MQ+ V + + + + LS CA+L A+ LG
Sbjct: 371 VRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGR 430
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+H Y + ++ + + N LI+MY K G + VF+N++ + +I+W ++I G +HG
Sbjct: 431 ELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHG 490
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
LG AL F+ M RAR+KP+ ITF+AILSAC H GLV GR F+ M + + IEP +E Y
Sbjct: 491 LGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHY 550
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
CM+DLLGRAG L+EA ++R MP E N +WG+LL + +Y D+++ E ++ L+
Sbjct: 551 ACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKS 610
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+G++ +LSNIYA GRW++S ++R R G+KK+PG S+IEV K+V+ F AG+ H
Sbjct: 611 KITGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHF 670
Query: 471 DFDRLYQILCKINGQM 486
+ +Y IL ++N M
Sbjct: 671 GLEDIYVILEELNLHM 686
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 217/463 (46%), Gaps = 62/463 (13%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTH---KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
L +R I + F +A +F +S + L+N+ I+A +A+ LY +++
Sbjct: 65 LAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMR 124
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
PD ++ P V++A L + L R +HC + G + +HVV L+ MY +
Sbjct: 125 KLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRME 184
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT----EKNVISWTTLIAG 184
DAR++FD + +R ++ WNTMV+GYA D A +F+ M + N ++WT+L++
Sbjct: 185 DARQLFDGMFVR--SIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSS 242
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+A+ +E + LF+ M+ ++ A+ LS CA + V+ G+ IH Y+ + G
Sbjct: 243 HARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDY 302
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNK------------------------------ 274
+ + NALI Y K +G A +VF +KNK
Sbjct: 303 LFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEK 362
Query: 275 -----------SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
+VI+W+ +I+G A G G ++L++F +M+ A+V N +T ++LS C
Sbjct: 363 SDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAE 422
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI-W 382
+ + LGR + R + I +I++ + G +E + + E I W
Sbjct: 423 LAALNLGRE-LHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNI--EGRDLISW 479
Query: 383 GSLLAASNIYGDVELGECALQHL-----IKLEPHNSGNYAILS 420
SL+ ++G LGE AL+ +++P N AILS
Sbjct: 480 NSLIGGYGMHG---LGENALRTFNEMIRARMKPDNITFVAILS 519
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 129/258 (50%), Gaps = 9/258 (3%)
Query: 107 LDSDVH---VVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW--NTMVAGYAKVGDLN 161
L S VH ++ + + C + AR++ +L L + + ++A YA+ L+
Sbjct: 21 LISHVHNDELIYSFHAFFQRCFTLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLS 80
Query: 162 NARALFE---LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+AR +F+ L + +++ W ++I A+ L+ M+ PD + +
Sbjct: 81 HARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIR 140
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
AC+ LG+ L +H + Q G + + N L+ MY K G++ A Q+F+ M +S+++
Sbjct: 141 ACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVS 200
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
W TM++G AL+ A +F RME ++PN +T+ ++LS+ GL + F +M+
Sbjct: 201 WNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMR 260
Query: 339 SRYGIEPKIEQYGCMIDL 356
+R GIE E ++ +
Sbjct: 261 TR-GIEIGAEALAVVLSV 277
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 273/502 (54%), Gaps = 35/502 (6%)
Query: 1 MIVR-GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
IVR G+D + + + ++ S L D +F + DV YNT I Q+ +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYED 189
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A+ + ++ S L+PD ++ VL + + G+EIH + G+DSDV++ ++L+
Sbjct: 190 ALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVD 249
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA K + ++ +F + ++ ISW
Sbjct: 250 MYA---------------------------------KSARIEDSERVFSHLYRRDSISWN 276
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+L+AGY Q + NEA+ LFR+M V+P +A + + ACA L + LG+ +H Y+ +
Sbjct: 277 SLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 336
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + + +AL+DMY+K G I A ++F+ M ++WT +I G ALHG G EA+ +F
Sbjct: 337 GFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLF 396
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M+R VKPN++ F+A+L+AC HVGLV+ YFN M YG+ ++E Y + DLLGR
Sbjct: 397 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 456
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L+EA + +M E ++W +LL++ +++ ++EL E + + ++ N G Y ++
Sbjct: 457 AGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLM 516
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
N+YA GRW E K+R +R G++K P CS+IE+ + H FV+GD SHP DR+ + L
Sbjct: 517 CNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFL 576
Query: 480 CKINGQMKFAEHLQNEFSGVLE 501
+ QM+ E + SGVL
Sbjct: 577 KAVMEQME-KEGYVADTSGVLH 597
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 181/364 (49%), Gaps = 39/364 (10%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPL--NAVILYNKIQASALRPDNYSFPFVLKAVVKL 89
+F P V + + I+ C TD L A+ + +++AS PD+ FP VLK+ +
Sbjct: 61 VFKTLESPPVLAWKSVIR--CFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMM 118
Query: 90 STIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNT 149
+ G +H V G+D D++ AL+ MY+ I RKVF+ + + +V +NT
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRK--DVVSYNT 176
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
++AGYA+ G ++E +A+ + R M ++KPD
Sbjct: 177 VIAGYAQSG-------MYE------------------------DALRMVREMGTSDLKPD 205
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ + L ++ V G+ IH Y+ + G+++ V + ++L+DMYAKS +I + +VF
Sbjct: 206 AFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 265
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
++ + I+W +++AG +G EAL +F +M A+V+P + F +++ AC H+ + L
Sbjct: 266 HLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHL 325
Query: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389
G++ + R G I ++D+ + G +Q A K+ RM + W +++
Sbjct: 326 GKQLHGYVL-RGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVS-WTAIIMGH 383
Query: 390 NIYG 393
++G
Sbjct: 384 ALHG 387
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Query: 150 MVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
+++ Y + L+ A +F+ + V++W ++I + + A+ F M+ PD
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ L +C + + GE +H +I + G++ + NAL++MY+K I +VFE
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE 164
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
M K V+++ T+IAG A G+ +AL M M + +KP+ T ++L +
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLP---------I 215
Query: 330 GRRYFNIMKS--------RYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
Y +++K R GI+ + ++D+ ++ ++++E++ + + ++
Sbjct: 216 FSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHL-YRRDSIS 274
Query: 382 WGSLLAA 388
W SL+A
Sbjct: 275 WNSLVAG 281
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 265/448 (59%), Gaps = 6/448 (1%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
+N L+ + C LGF A +F S+ D+ +N+ I + ++++ +++
Sbjct: 833 SNALIHGYAGFCE-LGF---ARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMR 888
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
+ ++ D + V+ A L + + ++ DV++ LI MY +
Sbjct: 889 MADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVD 948
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
AR+VFD + R N+ WN M+ GY K G+L AR LF+ M ++VISWT++I+ Y+Q
Sbjct: 949 LARRVFDRMRDR--NMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQA 1006
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN 248
Q +A+ LF+ M V VKPDEI + + LSACA +GA+++GE +H YI +Y +N + +
Sbjct: 1007 GQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVG 1066
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
NALIDMY K G + K L VFE M + ++WT++IAGLA++G AL++FS M R V+
Sbjct: 1067 NALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVR 1126
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P TF+ +L AC H G+V+ G YF M+ YG+ P+++ YGC++DLL R+G L A +
Sbjct: 1127 PTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYE 1186
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGR 428
++RMP + + +W LL+AS ++G++ L E A + L++ +P NSGNY + SN YA R
Sbjct: 1187 FIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNR 1246
Query: 429 WNESGKIRKVMRDMGVKKMPGCSYIEVS 456
W + K+R++M + V K S +E++
Sbjct: 1247 WEDVIKMRRLMEESNVHKPSASSSVEIN 1274
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 191/399 (47%), Gaps = 67/399 (16%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F +P + +N I+ QT+ P+ A+ YN + + AL +N ++PF+LKA +
Sbjct: 749 ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACAR 808
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+S + +H + + G DSD+ V ALI
Sbjct: 809 ISNVSCT-TVHARVLKLGFDSDLFVSNALIH----------------------------- 838
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
GYA +L AR +F+ M+E++++SW +LI GY + + +E + +F M++ +VK
Sbjct: 839 ----GYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKG 894
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM-------------- 254
D + M+ + AC LG + + + YIE+ + V L N LIDM
Sbjct: 895 DAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVF 954
Query: 255 -----------------YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
Y K+G + A ++F++M ++ VI+WT+MI+ + G +A+
Sbjct: 955 DRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVR 1014
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
+F M +VKP+EIT ++LSAC H+G +++G ++ +Y + I +ID+
Sbjct: 1015 LFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIR-KYDVNADIYVGNALIDMY 1073
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G +++ + M + ++ W S++A + G +
Sbjct: 1074 CKCGAVEKGLSVFEEMG-KRDSVSWTSVIAGLAVNGSAD 1111
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 157/338 (46%), Gaps = 31/338 (9%)
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
++++N + + ++ A LF + + W +I G++Q +QP EAI + M
Sbjct: 730 ISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYS 789
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ + + + L ACA++ V +H + + G ++ + ++NALI YA ++G
Sbjct: 790 QALFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFDSDLFVSNALIHGYAGFCELGF 848
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +VF+ M + +++W ++I G E L +F M A VK + +T + ++ AC
Sbjct: 849 ARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTV 908
Query: 324 V---GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
+ G+V+ Y K +E + +ID+ GR + A ++ RM + N
Sbjct: 909 LGEWGVVDAMIEYIEENK----VEVDVYLGNTLIDMYGRRSMVDLARRVFDRMR-DRNMV 963
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSG-NYAILSNIYAILGRWNESGKIRKVM 439
W +++ G++ A + L PH ++ + + Y+ G++ GK ++
Sbjct: 964 SWNAMIMGYGKAGNL----VAARKLFDDMPHRDVISWTSMISSYSQAGQF---GKAVRLF 1016
Query: 440 RDMGVKK-----------MPGCSYI---EVSKRVHEFV 463
++M V K + C++I +V + VHE++
Sbjct: 1017 QEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYI 1054
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 251/420 (59%), Gaps = 6/420 (1%)
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKL--STIELGREIHCQTVGTGLD-SDVHVVAALIQM 120
++ ++ + + P++ +F +L L + LG +H GLD + V V A++ M
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGM 61
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ AR VFD + + N WNTM+ GY + G +++A LF+ M E+++ISWT
Sbjct: 62 YSKRGRFRKARLVFDYMEEK--NSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTA 119
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+I G+ + EA+ FR MQ+ VKPD +A++AAL+AC LGA+ G WIH Y+
Sbjct: 120 MINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQD 179
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFS 300
V ++N+LID+Y + G + A QVF+ M+ ++V++W ++I G A +G E+L F
Sbjct: 180 FKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFR 239
Query: 301 RMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+M+ KPN +TF L+AC HVGLVE G RYF MK Y I P+IE YGC++DL RA
Sbjct: 240 KMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRA 299
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHNSGNYAIL 419
G L++A K+++ MP + N + GSLLAA G + L E ++HL L + NY IL
Sbjct: 300 GRLEDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVIL 359
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
SN+YA G+W + K+R+ M+ +G+KK PG S IE+ H F+AGD +H + + ++L
Sbjct: 360 SNMYAADGKWEGASKMRRKMKGLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIREVL 419
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 34/269 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
++N+ + ID G D A +F + D+ + I + A+ + +
Sbjct: 80 EKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFRE 139
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S ++PD + L A L + G IH V ++V V +LI +Y C C
Sbjct: 140 MQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGC 199
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VFD++ R V WN+++ G+A G
Sbjct: 200 VEFARQVFDKMEKRT--VVSWNSVIVGFAANG---------------------------- 229
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIV 245
+E++ FR+MQ E KP+ + AL+AC +G VE G + + Y ++ +
Sbjct: 230 ---HAHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRI 286
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK 274
L+D+Y+++G++ AL+V ++M K
Sbjct: 287 EHYGCLVDLYSRAGRLEDALKVVQSMPMK 315
>gi|147797709|emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 277/527 (52%), Gaps = 73/527 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL---GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI G N L S+ + S +S+ G + A I D Y +NT I+ + ++P
Sbjct: 1 MITNGHLHNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDP 60
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+++YN ++ L+ D Y+ FV+KA I G +IH Q G + +V + AL
Sbjct: 61 EEAILIYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTAL 120
Query: 118 IQM-------------------------------YASCKCIYDARKV-FDELSLRV---- 141
+ M YA C Y R+V +D +S V
Sbjct: 121 LSMYGLFDEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVSSNVKPNG 180
Query: 142 --------------------------------WNVAVWNTMVAGYAKVGDLNNARALFEL 169
+V V N ++ Y+K G + +A +F+L
Sbjct: 181 VTAVSILSVCSSLRALREGKAVHGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQVFQL 240
Query: 170 MTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG 229
M +NV+SWT+LI GY+ + PNEA+ F++M+ EN++PDEI +L + C++L + ELG
Sbjct: 241 MPMRNVVSWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELG 300
Query: 230 EWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
EWI Y+ + GL P + N L+DM+AK G I +A Q+F+ M+ K++++WT MI GLA+
Sbjct: 301 EWISQYVVKTGLVKESPAIANVLMDMHAKCGNIKRACQIFDGMEEKTIVSWTIMIQGLAM 360
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIE 348
+G G AL F +M+R KP+ + F+++LSAC H GLV+ G R F+ M++ Y I P +E
Sbjct: 361 YGHGLSALVRFCQMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHIXPWME 420
Query: 349 QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKL 408
YGCM+D+L RAG + EA K ++ MP + + +W +LL A G++ L + L +L
Sbjct: 421 HYGCMVDILCRAGLVDEAFKFVQNMPIKPDMIVWRTLLGACXXQGNISLANQVMNXLCEL 480
Query: 409 EPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGCSYIE 454
P S +Y +LSN++A W+ ++RK M D GV K PGCS+IE
Sbjct: 481 GPKKSEDYVLLSNLFASNAEWDNVXEVRKEMGDRGVTKQDPGCSFIE 527
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 274/497 (55%), Gaps = 38/497 (7%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIF--THKSKPDVYLYNTTIKALCQTDNPLN 59
I GLD + + + +I + S G A +F K+ +N+ I ++
Sbjct: 180 IETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVD 239
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV Y + +PD + +L + + + G IH G DSD+ ++
Sbjct: 240 AVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLI----- 294
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
NT+++ Y++ GD+++A LF+ M+ + +SWT
Sbjct: 295 ----------------------------NTLISMYSRCGDISSATILFDGMSIRTCVSWT 326
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I+GY+++ + ++A+ LF M+ KPD + +L+ +S C + GA+ LG WI NY +
Sbjct: 327 AMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLH 386
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
L V + NALIDMYAK G + A ++F ++ N++V++WT MIA AL+G REALD+F
Sbjct: 387 ELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLF 446
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
S + + ++PN ITF+A+L ACCH G +E GR F +M RYGI P ++ Y CMIDLLGR
Sbjct: 447 SLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGR 506
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
G L EA ++++ MP + + IWG+LL A I+ ++E+GE ++L +L+P + ++ +
Sbjct: 507 KGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEM 566
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+NIYA +GRW+E +RK MR ++K PG S ++V+ H F D SH D +Y+ L
Sbjct: 567 ANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEAL 626
Query: 480 CKINGQMK---FAEHLQ 493
+ QMK F+ H Q
Sbjct: 627 GNLAMQMKQKEFSSHAQ 643
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 190/407 (46%), Gaps = 39/407 (9%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
+D G D AY++F ++ +N I Q + L+ ++ RPD
Sbjct: 94 VDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDA 153
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ + +AV+ ++ + +H + TGLD+D
Sbjct: 154 ATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADT------------------------- 188
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM--TEKNVISWTTLIAGYAQMDQPNEA 194
+V NT +A Y+K G+L A+ +F + T ++ +SW +LIA YA + +A
Sbjct: 189 --------SVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
Query: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254
+ ++ + + KPD +++ LS+C Q A+ G IH + Q G ++ + L N LI M
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
Query: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
Y++ G I A +F+ M ++ ++WT MI+G + G +AL +F+ ME KP+ +T
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP 374
++++S C G + LG + + S + ++ + +ID+ + G L +A ++ +P
Sbjct: 361 LSLISGCGKTGALGLG-HWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLP 419
Query: 375 FEANAAIWGSLLAASNIYGDVE--LGECALQHLIKLEPHNSGNYAIL 419
W +++AA + G+ L +L +EP+N A+L
Sbjct: 420 -NRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVL 465
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 163/360 (45%), Gaps = 47/360 (13%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N++I+ N A+ L+++++ + L+P+N++FPF+ KA KLS + + IH V
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA 163
+ SD++V A++ MY C + DA +FD++ +R N+A WN M+ G++++G L
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVR--NIASWNAMIIGFSQIGSL--- 134
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
+ LF M++ +PD ++ A
Sbjct: 135 ----------------------------DRVFNLFMGMRLVGTRPDAATVIGLTRAVISA 166
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN--KSVITWTT 281
++ + +H + GL+ ++N I Y+K G++ A VF ++ +S ++W +
Sbjct: 167 KSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNS 226
Query: 282 MIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH-----VGLVELGRRYFNI 336
+IA A G +A+ + + KP+ T I++LS+C G + G +
Sbjct: 227 LIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGF--- 283
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G + I +I + R G + A L M + W ++++ + G V+
Sbjct: 284 ---QLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVS-WTAMISGYSEVGRVD 339
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG-LVELG 330
K ++ W + I G G +AL +F +++ ++PN TF + AC + L
Sbjct: 13 KLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQ 72
Query: 331 RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASN 390
+ +++KS + + ++ M+D+ + G + +A L +MP N A W +++ +
Sbjct: 73 IIHTHVVKSPFYSDIYVQT--AMVDMYVKCGKVDDAYNLFDKMPVR-NIASWNAMIIGFS 129
Query: 391 IYGDVE 396
G ++
Sbjct: 130 QIGSLD 135
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 273/471 (57%), Gaps = 4/471 (0%)
Query: 2 IVRGLDQ-NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++R L Q + ++ S I+ + G A +F + + I Q + +
Sbjct: 296 VIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS 355
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+N+++A + D ++ ++ + LGR++H + +G + + V +LI +
Sbjct: 356 VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISL 415
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + +A VF +S R ++ W +M+ Y+++G++ AR F+ M +N I+W
Sbjct: 416 YAKCGDLQNAEFVFSSMSER--DIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNA 473
Query: 181 LIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++ Y Q + + ++ M ++V PD + + CA +GA +LG+ I + +
Sbjct: 474 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA 533
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL V + NA I MY+K G+I +A ++F+ + K V++W MI G + HG+G++A F
Sbjct: 534 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 593
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M KP+ I+++A+LS C H GLV+ G+ YF++M +GI P +E + CM+DLLGR
Sbjct: 594 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 653
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG+L EA+ L+ +MP + A +WG+LL+A I+G+ EL E A +H+ +L+ +SG+Y +L
Sbjct: 654 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLL 713
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+ IY+ G+ ++S ++RK+MRD G+KK PG S++EV +VH F A D SHP
Sbjct: 714 AKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHP 764
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 187/370 (50%), Gaps = 9/370 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR-PDNYSFPFVLKAVV 87
A +F + DV +NT + Q L+ + + + S P+ ++F V+K+
Sbjct: 90 AEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCG 149
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L EL ++ D V AL+ M+ C + A ++F ++ +
Sbjct: 150 ALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP--TIFCR 207
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N+M+AGYAK+ +++A FE M E++V+SW +IA +Q + EA+ L M + V+
Sbjct: 208 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 266
D ++L+ACA+L ++ G+ +H + + L I P + +ALI++YAK G +A +
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIR-SLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF ++++++ ++WT +I G + +++++F++M + ++ ++S C +
Sbjct: 327 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMD 386
Query: 327 VELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ LGR+ ++ +KS G I +I L + G LQ AE + M E + W S+
Sbjct: 387 LCLGRQLHSLCLKS--GHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSM 443
Query: 386 LAASNIYGDV 395
+ A + G++
Sbjct: 444 ITAYSQIGNI 453
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 66/376 (17%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D+A F ++ DV +N I AL Q+ A+ L ++ +R D+ ++ L A
Sbjct: 221 DHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTAC 280
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L ++ G+++H + + + D +V +ALI++YA C +A++VF+ L
Sbjct: 281 ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-------- 332
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
++N +SWT LI G Q + ++++ LF +M+ E +
Sbjct: 333 -------------------------DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D+ A+ +S C + LG +H+ + G N + ++N+LI +YAK G + A
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427
Query: 267 VFENMKNKSVITWTTMIA----------------GLAL---------------HGLGREA 295
VF +M + +++WT+MI G+A HG +
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 487
Query: 296 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
L M+S M + V P+ +T++ + C +G +LG + + G+ + I
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVSVANAAI 546
Query: 355 DLLGRAGYLQEAEKLL 370
+ + G + EA+KL
Sbjct: 547 TMYSKCGRISEAQKLF 562
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 37/330 (11%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + V GL S V + L+ Y SC + DAR++ ++ NV N M+ GYA
Sbjct: 24 RALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLL-RADIKEPNVITHNIMMNGYA 82
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAML 214
K G L++A LF+ M ++V SW TL++GY Q + + + F M + P+
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG--------------- 259
+ +C LG EL + ++ + AL+DM+ + G
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 260 ----------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
I A++ FE+M + V++W MIA L+ G REAL + M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R V+ + T+ + L+AC + + G++ + +++S I+P + +I+L + G
Sbjct: 263 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS--ALIELYAKCGS 320
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+EA+++ + + N+ W L+ S Y
Sbjct: 321 FKEAKRVFNSLQ-DRNSVSWTVLIGGSLQY 349
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 36/196 (18%)
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE-N 270
A+ AL +C GA+ +H + GL + V L N L+ Y G + A ++ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK---------------------- 308
+K +VIT M+ G A G +A ++F RM R V
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 309 ----------PNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLL 357
PN TF ++ +C +G EL + + K + +P +E ++D+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET--ALVDMF 183
Query: 358 GRAGYLQEAEKLLRRM 373
R GY+ A +L ++
Sbjct: 184 VRCGYVDFASRLFSQI 199
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 271/465 (58%), Gaps = 21/465 (4%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F + +V + + I+ + + L A +L+ ++ D S+ ++
Sbjct: 182 GRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMP----EKDLASWKVMV 237
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC----IYDARKVFDELSL 139
A + + + R + +H V M + C C + A++ FD +
Sbjct: 238 SAYMSVGNLVAARNLFELM-------PIHDVGTWNLMISGC-CKAGEMDAAKEFFDRMQE 289
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
R NVA W ++ GY KVGD++ AR++F+ M EKN+++W+T+I GYA+ P ++ L++
Sbjct: 290 R--NVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYK 347
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+ + +KPDE L +SAC+QLG + E + L + + +LIDMYAK G
Sbjct: 348 TFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCG 407
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
I +A+QVFE + K + ++T+I A HGL +A+ +FS M++A +KP+ + F+ +L+
Sbjct: 408 NIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLT 467
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GLV GRR F M YGI+P + Y CM+D+LGRAG L+EA L+ MP NA
Sbjct: 468 ACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNA 527
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
+WG+LL+A ++ +V+L E A L ++EP+NSGNY +L NIYA G+W++ K+R ++
Sbjct: 528 TVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMI 587
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY---QILCK 481
R+ V+K G S+IE+ +HEFV GD SH D +R++ ++LCK
Sbjct: 588 RENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLELLCK 632
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 186/387 (48%), Gaps = 38/387 (9%)
Query: 13 LSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASAL 72
L++ + S G YA+ +F +P+ +L+ I + + NA + K+ +
Sbjct: 39 LNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENI 98
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
P N++ VLKAV +L I+ G ++ V G + D+ V +I+++ C + AR+
Sbjct: 99 VPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQ 158
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FDE+ R + WN+M+ GY G ++ AR LF+ M E+NVISWT++I GY +
Sbjct: 159 MFDEMEER--DAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLL 216
Query: 193 EAITLFRRMQVENVKPDEIAMLA---------------------------ALSACAQLGA 225
EA LF RM +++ ++ + A +S C + G
Sbjct: 217 EARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGE 276
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
++ + + +++ + + V +ID Y K G + A VF+ M K+++ W+TMI G
Sbjct: 277 MDAAKEFFDRMQERNVASWV----MIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGG 332
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYG--I 343
A G +L ++ + +KP+E + I+SAC +G+ + +++ G +
Sbjct: 333 YAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAE---SVICDFVGPSL 389
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLL 370
P ++ +ID+ + G ++ A ++
Sbjct: 390 FPNLQVVTSLIDMYAKCGNIERAVQVF 416
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 36/325 (11%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N ++ Y+K G ++ A LF+ E N WT LI G+ + +Q A F +M EN+
Sbjct: 40 NKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIV 99
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P + + L A ++LG ++ G+ ++ + G + + N +I+++ + G++G A Q+
Sbjct: 100 PLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQM 159
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRME---------------------RAR 306
F+ M+ + ++W +MI G +G A +F RME AR
Sbjct: 160 FDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEAR 219
Query: 307 V------KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
V + + ++ ++SA VG + R F +M + + MI +A
Sbjct: 220 VLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIH-----DVGTWNLMISGCCKA 274
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
G + A++ RM E N A W ++ GDV+ ++ N ++ +
Sbjct: 275 GEMDAAKEFFDRMQ-ERNVASWVMIIDGYIKVGDVDAARSVFD---QMPEKNLVAWSTMI 330
Query: 421 NIYAILGRWNESGKIRKVMRDMGVK 445
YA G S K+ K ++ G+K
Sbjct: 331 GGYAKTGHPYSSLKLYKTFKEQGIK 355
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 35/275 (12%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
ID +G D A S+F + ++ ++T I +T +P +++ LY + ++PD
Sbjct: 299 IDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDE 358
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++ A +L + + C VG L ++ VV +LI MYA C
Sbjct: 359 TFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKC------------ 406
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
G++ A +FE++ +K++ ++T+I +A +AI+
Sbjct: 407 ---------------------GNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAIS 445
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI-HNYIEQYGLNTIVPLNNALIDMY 255
LF MQ N+KPD +A L L+AC G V G + I++YG+ ++D+
Sbjct: 446 LFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDIL 505
Query: 256 AKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
++G + +A + +M + W +++ +H
Sbjct: 506 GRAGCLEEAHSLICSMPVAPNATVWGALLSACRVH 540
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 9 NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQ 68
N +++ ID + G + A +F + D++ Y+T I A +A+ L++++Q
Sbjct: 392 NLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQ 451
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYASCKCI 127
+ ++PD +F VL A + GR + Q + G+ A ++ + C+
Sbjct: 452 KANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCL 511
Query: 128 YDARKVFDELSLRVWNVAVWNTMVAG 153
+A + + + N VW +++
Sbjct: 512 EEAHSLICSMPVAP-NATVWGALLSA 536
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/491 (35%), Positives = 270/491 (54%), Gaps = 35/491 (7%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTD-NPLNAVILY 64
L+ ++H + I S L A +F DV +N +KA + N +L
Sbjct: 159 LNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLR 218
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ A+ P+ + VL A + LGR + + G+++D V +AL+ MY C
Sbjct: 219 DMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKC 278
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
G++ AR +F+ + +K+V++W +I G
Sbjct: 279 ---------------------------------GEIAEARRVFDSIIDKDVVAWNAMITG 305
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
YAQ NEAI+LF M+ V PD+I + LSAC+ +GA+ELG + Y GL
Sbjct: 306 YAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNN 365
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + AL+DMYAK G + KA++VF M+ K+V +W +I GLA +G G EA+ F M
Sbjct: 366 VYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRN 425
Query: 305 AR-VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP++ITFI +LSAC H GLV+ G+R+FN + S + I PKIE Y CM+D L R+G+L
Sbjct: 426 EDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHL 485
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+E + ++P + +A + G+LLAA +VE+GE + +I+LEP NS NY + S IY
Sbjct: 486 EEVWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIY 545
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A GR ++S K+R +MR+ GV K PGCS++E+S +V EF AGD D +YQ+L +
Sbjct: 546 ASSGRLDDSAKMRGLMRERGVNKTPGCSWVEISGKVLEFYAGDEPQHGADDMYQVLDLLV 605
Query: 484 GQMKFAEHLQN 494
+M+ ++ N
Sbjct: 606 DEMRLEGYVPN 616
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ ++ + S + G A +F DV +N I Q A+ L+
Sbjct: 260 GMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLF 319
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+ ++ + + PD + VL A + +ELG E+ YASC
Sbjct: 320 HNMKKAGVCPDKITLAGVLSACSAVGALELGSEL--------------------DGYASC 359
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ +Y+ NV V +V YAK GDL+ A +F M KNV SW LI G
Sbjct: 360 RGLYN-------------NVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICG 406
Query: 185 YAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGE-WIHNYIEQYGLN 242
A Q +EAI F M+ E+ +KPD+I + LSAC G V+ G+ W ++ ++ +
Sbjct: 407 LAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQII 466
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
+ + ++D A+SG + + E + +K
Sbjct: 467 PKIEHYSCMVDPLARSGHLEEVWDFIEKIPDK 498
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H +E+ LN+ ++LI +Y+ G A +VF + ++ V++W M+ G+
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 293 REALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
E M M + V PN +T +L+AC G + LGR KS G+E
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKS-AGMETDSLVGS 269
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
++ + + G + EA ++ + + + W +++
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSI-IDKDVVAWNAMITG 305
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 267/488 (54%), Gaps = 45/488 (9%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
KPD+ +N+ + + N + + +Q++ +PD+ S L+AV+ L LG+E
Sbjct: 330 KPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKE 389
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
IH + + L+ DV+V +L+ Y C+ A VF + N+ WN++++GY
Sbjct: 390 IHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNK--NICAWNSLISGYTYK 447
Query: 158 GDLNNARALFELMTEK---------------------------------------NVISW 178
G +NA L M E+ NV+SW
Sbjct: 448 GLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSW 507
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
T +I+G Q + +A+ F +MQ ENVKP+ + L ACA +++GE IH + +
Sbjct: 508 TAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMR 567
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
+G + + ALIDMY K GK+ A +VF N+K K++ W M+ G A++G G E +
Sbjct: 568 HGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTL 627
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M + V+P+ ITF A+LS C + GLV G +YF+ MK+ Y I P IE Y CM+DLLG
Sbjct: 628 FDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLG 687
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
+AG+L EA + +P +A+A+IWG++LAA ++ D+++ E A ++L++LEP+NS NYA+
Sbjct: 688 KAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYAL 747
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD----FDR 474
+ NIY+ RW + ++++ M +GVK S+I+V + +H F SHP+ +
Sbjct: 748 MMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFE 807
Query: 475 LYQILCKI 482
LYQ++ +I
Sbjct: 808 LYQLISEI 815
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 223/464 (48%), Gaps = 30/464 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ RG + HL I+ D A +F + +L+NT + A +++ +A
Sbjct: 157 LVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDA 216
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ ++Q+++ + + + +L+A KL + G++IH + G S+ + +++ M
Sbjct: 217 LELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSM 276
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVI 176
Y+ + AR FD S N A WN++++ YA LN A L + M + ++I
Sbjct: 277 YSRNNRLELARVAFD--STEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDII 334
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+W +L++G+ +T FR +Q KPD ++ +AL A LG LG+ IH YI
Sbjct: 335 TWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYI 394
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
+ L V + +L+D Y K+ + KA VF + KNK++ W ++I+G GL A
Sbjct: 395 MRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAE 454
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
+ ++M+ +KP+ +T+ +++S G E N +KS G+ P + + MI
Sbjct: 455 KLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKS-LGLTPNVVSWTAMISG 513
Query: 357 LGRAGYLQEAEKLLRRMPFE---ANAAIWGSLLAASNIYGDVELGECALQHLIKL--EPH 411
+ +A + +M E N+ +LL A CA L+K+ E H
Sbjct: 514 CCQNENYMDALQFFSQMQEENVKPNSTTICTLLRA-----------CAGSSLLKIGEEIH 562
Query: 412 N-SGNYAILSNIY---AILGRWNESGKIR---KVMRDMGVKKMP 448
S + L +IY A++ + + GK++ +V R++ K +P
Sbjct: 563 CFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLP 606
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 145/301 (48%), Gaps = 36/301 (11%)
Query: 23 LGFSDY--AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI-LYNKIQASALRPDNYSF 79
L F D+ A +F + L+N+ I+ + ++ ++ ++ ++ D+ +
Sbjct: 75 LQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKAL 134
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
VLK + L + LG E+H V G DVH+ ALI +Y I A +VFDE L
Sbjct: 135 TVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPL 194
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ +WNT+V + L +EK W +A+ LFR
Sbjct: 195 Q--EDFLWNTIV--------------MANLRSEK----W-------------EDALELFR 221
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
RMQ + K + ++ L AC +L A+ G+ IH Y+ ++G + + N+++ MY+++
Sbjct: 222 RMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNN 281
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
++ A F++ ++ + +W ++I+ A++ A D+ ME + VKP+ IT+ ++LS
Sbjct: 282 RLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLS 341
Query: 320 A 320
Sbjct: 342 G 342
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD-QPNEAITLFRRMQVENVK 207
+M+ Y + GD +A +F + +N + W + I +A +E + +F+ + + VK
Sbjct: 69 SMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVK 128
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
D A+ L C L + LG +H + + G + V L+ ALI++Y K I A QV
Sbjct: 129 FDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQV 188
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F+ + W T++ +AL++F RM+ A K + T + +L AC + +
Sbjct: 189 FDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRAL 248
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEA----NAAIWG 383
G++ + R+G ++ + R L+ L R+ F++ N+A W
Sbjct: 249 NEGKQIHGYV-IRFGRVSNTSICNSIVSMYSRNNRLE-----LARVAFDSTEDHNSASWN 302
Query: 384 SLLAA 388
S++++
Sbjct: 303 SIISS 307
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 270/469 (57%), Gaps = 34/469 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +IF+ + DV ++ I ++++ ++ + + P+ + +L +
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++LGRE+H + G D+ ++ A+I MYA C
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC------------------------ 489
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G +N A +FE +++++++SW ++I AQ D P+ AI +FR+M V +
Sbjct: 490 ---------GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D +++ AALSACA L + G+ IH ++ ++ L + V + LIDMYAK G + A+ VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLV 327
+ MK K++++W ++IA HG +++L +F M E++ ++P++ITF+ I+S+CCHVG V
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G R+F M YGI+P+ E Y C++DL GRAG L EA + ++ MPF +A +WG+LL
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A ++ +VEL E A L+ L+P NSG Y ++SN +A W K+R +M++ V+K+
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
PG S+IE++KR H FV+GD +HP+ +Y +L + G+++ ++ +
Sbjct: 781 PGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPY 829
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 176/384 (45%), Gaps = 37/384 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL- 63
G+D N + S I + G D +F + D ++N + + L++VI
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC-GALDSVIKG 226
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++ ++ + P+ +F VL I+LG ++H V +G+D
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD--------------- 271
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
+ ++ N++++ Y+K G ++A LF +M+ + ++W +I+
Sbjct: 272 ------------------FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q E++T F M V PD I + L + ++ +E + IH YI ++ ++
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ L +ALID Y K + A +F + V+ +T MI+G +GL ++L+MF +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ ++ PNEIT ++IL + ++LGR + + G + + +ID+ + G +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRM 492
Query: 364 QEAEKLLRRMPFEANAAIWGSLLA 387
A ++ R+ + + W S++
Sbjct: 493 NLAYEIFERLS-KRDIVSWNSMIT 515
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +G D ++ ID + G + AY IF SK D+ +N+ I Q+DNP A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ ++ S + D S L A L + G+ IH + L SDV+ + LI M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A VF +++ N+ WN+++A G L ++ LF M EK+
Sbjct: 587 YAKCGNLKAAMNVFK--TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS------ 638
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
++PD+I L +S+C +G V+ G + + E Y
Sbjct: 639 ------------------------GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
G+ ++D++ ++G++ +A + ++M W T++ LH
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N+ I + + A+ Y K+ + PD +FP ++KA V L + G + TV
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTV 164
Query: 104 GT-GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+ G+D + V ++LI+ Y I K+FD + + + +WN M+ GYAK G L+
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK--DCVIWNVMLNGYAKCGALD- 221
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
++I G F M+++ + P+ + LS CA
Sbjct: 222 -----------------SVIKG-------------FSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
++LG +H + G++ + N+L+ MY+K G+ A ++F M +TW M
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
I+G GL E+L F M + V P+ ITF ++L +
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 130/308 (42%), Gaps = 33/308 (10%)
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L+A + + G+++H + + D + ++ MYA C D K+F L LR
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN++++ + + G LN +A+ + +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLN-------------------------------QALAFYFK 128
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M V PD + AC L + +++ + + G++ + ++LI Y + GK
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
I ++F+ + K + W M+ G A G + FS M ++ PN +TF +LS
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C L++LG + ++ G++ + ++ + + G +A KL R M A+
Sbjct: 249 CASKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTV 306
Query: 381 IWGSLLAA 388
W +++
Sbjct: 307 TWNCMISG 314
>gi|225430506|ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 517
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 263/487 (54%), Gaps = 63/487 (12%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N IK NP A++ Y +++ DN++FP +LKA LS+ +G +H Q +
Sbjct: 22 WNKVIKRRVSQGNPDQAILAYVEMKRVGFDADNFTFPVLLKAASSLSSCCIGFALHGQAM 81
Query: 104 GTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---VWN----------------- 143
TG V AL+ MY++ I A KVF+E+ ++ VWN
Sbjct: 82 KTGFSGHCFVGTALLDMYSAFGAIDHATKVFEEMGVKDVVVWNSMLAAYASCGQMDNAMK 141
Query: 144 ---------VAVWNTMVAGYAK-------------------------------VGDLNNA 163
+A +N M++GYAK VGD+ NA
Sbjct: 142 LFDNMPLKDLASFNIMISGYAKIGKKAAARSIFDRIHAKDIVSWNSMILACTNVGDMGNA 201
Query: 164 RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL 223
R LF++M +KNVI+W T+I+GY EA+ LF M+ N + D + + LSACA L
Sbjct: 202 RNLFDVMPKKNVITWNTMISGYLHAQLYAEAVDLFDEMKAGNHEADHLTVTLVLSACAHL 261
Query: 224 GAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
G + G +H Y + + L + + +LIDMYAK G I ++L+VF + K + W +I
Sbjct: 262 GWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDIYCWNAII 321
Query: 284 AGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343
+GLALHG G A+ + +M V+P+EITFI +LSAC H LV+ G R F+ M+ +G+
Sbjct: 322 SGLALHGYGHAAVKLLDKMRDNGVRPDEITFIGLLSACSHRSLVQEGCRLFDCMEKEFGL 381
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQ 403
PK+E YGCM+DLLGRAG+L A +L++ MPFE +I G+LL A I+ D+E GE +
Sbjct: 382 PPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKVI- 440
Query: 404 HLIKLEPHN--SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHE 461
+LI + H+ G + + N+YA G+W E+ + R+ M + G+ K G S IEV + +
Sbjct: 441 NLITSKAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEVDGKFYR 500
Query: 462 FVAGDTS 468
F+AGD S
Sbjct: 501 FLAGDIS 507
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 142/358 (39%), Gaps = 69/358 (19%)
Query: 17 IDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDN 76
I +C+++G A ++F K +V +NT I AV L+++++A D+
Sbjct: 189 ILACTNVGDMGNARNLFDVMPKKNVITWNTMISGYLHAQLYAEAVDLFDEMKAGNHEADH 248
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
+ VL A L + G E+H L S HV +LI MYA C I + +VF
Sbjct: 249 LTVTLVLSACAHLGWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVF-- 306
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+V ++ WN +++G A + GY + A+
Sbjct: 307 YKSQVKDIYCWNAIISGLA--------------------------LHGYG-----HAAVK 335
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIVPLNNALIDMY 255
L +M+ V+PDEI + LSAC+ V+ G + + +E ++GL + ++D+
Sbjct: 336 LLDKMRDNGVRPDEITFIGLLSACSHRSLVQEGCRLFDCMEKEFGLPPKLEHYGCMVDLL 395
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
++G + A Q+ + M +P E
Sbjct: 396 GRAGFLDPAFQLIKAMP----------------------------------FEPGESILG 421
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
A+L AC +E G + N++ S+ ++ ++L G +EA + RM
Sbjct: 422 ALLGACVIHQDLETGEKVINLITSK-AHHVSDGEFMMFVNLYASCGQWKEANRWRERM 478
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 250/445 (56%), Gaps = 2/445 (0%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
F + +V +NT I Q A L+ +++ L D ++ +L A
Sbjct: 171 FFGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGN 230
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+E+GR +HC + +G D + AL+ MY C ++ A + FD + ++ NV W +M+
Sbjct: 231 LEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIK--NVVTWTSML 288
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
AK G ++ R FE M E+N++SW +I+ Y Q + +E + L+ RM+ + PDE
Sbjct: 289 CAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEF 348
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ LSAC Q G + G+ IH Y+ + V L N+L+DMYA+ G++ A+ +F M
Sbjct: 349 TLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEM 408
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
NK+VI+W +I LA+HG +E + F M P+EITF+ +LSAC H GL+E G
Sbjct: 409 PNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGE 468
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
YF M Y +EP++E YGCM+DLLGR G+L +A L++ M + + +WG+LL A I
Sbjct: 469 YYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRI 528
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+G+VE+G+ ++ L++LE G + ++ N++ +W + K+RK+M++ G KK G S
Sbjct: 529 HGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVS 588
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLY 476
IEV +HEF D H + +Y
Sbjct: 589 SIEVKNIIHEFGVEDLRHESTNEIY 613
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 191/433 (44%), Gaps = 72/433 (16%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD------YAYSIFTHKSKPDVYLYNTTIKALCQT 54
++V G + + S+ I S +L D +A +F +PD ++YNT ++A +
Sbjct: 33 LVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIPEPDRFMYNTLVRAYSNS 92
Query: 55 DNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVV 114
D P A+ L+ + + P+ ++ PFVLKA + +E H V G + V
Sbjct: 93 DCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVA 152
Query: 115 AALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AL+ +AS + D+R+ F E++ R NV WNTM+ GYA+ G++
Sbjct: 153 NALLHFHASAGSLRDSRRFFGEMADR--NVVSWNTMIGGYAQAGEV-------------- 196
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+EA LF M+ + + D +++ L AC+ G +E+G +H
Sbjct: 197 -----------------SEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHC 239
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---- 290
++ G L NAL+DMY K G + A + F+ M K+V+TWT+M+ A HG
Sbjct: 240 HMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDA 299
Query: 291 -------------------------LGR--EALDMFSRMERARVKPNEITFIAILSACCH 323
GR E LD+++RM + P+E T +LSAC
Sbjct: 300 VRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQ 359
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
G + G+ ++ + +P + ++D+ R G + A L MP N W
Sbjct: 360 NGDLASGKMIHCYVRDNFN-DPGVTLLNSLLDMYARCGQVDTAIGLFTEMP-NKNVISWN 417
Query: 384 SLLAASNIYGDVE 396
++ A ++G +
Sbjct: 418 VIIGALAMHGRAQ 430
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 150/303 (49%), Gaps = 10/303 (3%)
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+A + T+ AG + G L +AR LF+ + E + + TL+ Y+ D P EA+ L R +
Sbjct: 49 IASYCTLSAG-DRDGGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQ 107
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ P+E + L AC + AVE H + + G + + NAL+ +A +G +
Sbjct: 108 RGILPNEFTLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRD 167
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
+ + F M +++V++W TMI G A G EA +F M + + T +++L AC
Sbjct: 168 SRRFFGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSS 227
Query: 324 VGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
G +E+GR + +++ S ++ + ++D+ G+ G L A + MP + N W
Sbjct: 228 EGNLEVGRLVHCHMLVSGSRVDRILGN--ALLDMYGKCGDLWMAHRCFDMMPIK-NVVTW 284
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPH-NSGNYAILSNIYAILGRWNESGKIRKVMRD 441
S+L A +G V+ A++ + P N ++ + + Y GR +E+ + MR
Sbjct: 285 TSMLCAQAKHGSVD----AVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRS 340
Query: 442 MGV 444
+G+
Sbjct: 341 LGI 343
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 275/487 (56%), Gaps = 36/487 (7%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL ++ S + SC S G +YA SIF+ +P + YNT I+ + + A++
Sbjct: 58 GLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALL 117
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
LY ++ + PDN+++PFVLKA L ++ G +IH GL+ DV V LI MY
Sbjct: 118 LYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYG 177
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
K G + +A +FE M EK+V SW+++I
Sbjct: 178 ---------------------------------KCGAIEHAGVVFEQMDEKSVASWSSII 204
Query: 183 AGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+A ++ +E + L M E + +E +++ALSAC LG+ LG IH + +
Sbjct: 205 GAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNIS 264
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V + +LIDMY K G + K L VF+NM +K+ ++T MIAGLA+HG GREA+ +FS
Sbjct: 265 ELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSD 324
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M + P+++ ++ +LSAC H GLV G + FN M+ + I+P I+ YGCM+DL+GRAG
Sbjct: 325 MLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAG 384
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L+EA L++ MP + N +W SLL+A ++ ++E+GE A +++ +L HN G+Y +L+N
Sbjct: 385 MLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLAN 444
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+YA +W +IR M + + + PG S +E ++ V++FV+ D S P + +Y ++ +
Sbjct: 445 MYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQ 504
Query: 482 INGQMKF 488
+ Q+KF
Sbjct: 505 MEWQLKF 511
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 257/455 (56%), Gaps = 4/455 (0%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G + + S ++ + LG D A +F + L+N ++ + AV
Sbjct: 76 IKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAV 135
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L +++ S + PD + + A + + LGR IH + ++ V AL+ MY
Sbjct: 136 ALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVY-MDNVFGFNLPVANALLDMY 194
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C+ +A K+F+++ R N+ W +V+GY G L+ AR LF EK++I WT +
Sbjct: 195 TKNDCLEEAVKLFEQMPAR--NIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAM 252
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I Q EA+TLFR MQ++ V+PD ++ L+ CA LGA++ GEWIH Y EQ +
Sbjct: 253 INACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKM 312
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
L ALIDMY+K G I K+L+VF M+ + WT +I GLA +G AL++F
Sbjct: 313 KIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQD 372
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+R++VKP+ +TFI +LSACCH GLV+ GR+ F+ M+ Y IEP++E Y C+++LLGRAG
Sbjct: 373 MQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAG 432
Query: 362 YLQEAEKLLRRMPFEANA-AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
L EAE+L+ +P +A ++G+LL A +G+VE+ E + + + + + ++S
Sbjct: 433 LLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMS 492
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEV 455
N+YA RW + ++R M VKK GCS IEV
Sbjct: 493 NVYATASRWEDVIRVRGKMAHPTVKKTAGCSLIEV 527
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 179/376 (47%), Gaps = 73/376 (19%)
Query: 45 NTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVG 104
N I+ L + + + +Y ++A L D++++PFVL+AV L GR+ H +
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 105 TGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNAR 164
TG D + ++L++MY + ARKVFDE+ R + +WN MV Y + G + A
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRA--LVLWNMMVRCYIRCGRYSAAV 135
Query: 165 ALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLG 224
AL E +M+ V PD + ++ A++AC++
Sbjct: 136 ALSE-------------------------------QMERSGVTPDRVTLVTAVTACSRAR 164
Query: 225 AVELGEWIHNYIEQ-YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMI 283
+ LG IH Y++ +G N +P+ NAL+DMY K+ + +A+++FE M +++I+WT ++
Sbjct: 165 DLSLGRRIHVYMDNVFGFN--LPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILV 222
Query: 284 AGLAL-------------------------------HGLGREALDMFSRMERARVKPNEI 312
+G L HG EAL +F M+ RV+P+
Sbjct: 223 SGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRF 282
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY--GCMIDLLGRAGYLQEAEKLL 370
T + +L+ C ++G ++ G + R + KI+ +ID+ + G+++++ ++
Sbjct: 283 TVVTLLTCCANLGALDQGEWIHQYAEQR---KMKIDAVLGTALIDMYSKCGHIEKSLEVF 339
Query: 371 RRMPFEANAAIWGSLL 386
RM +A W +++
Sbjct: 340 WRMQGR-DATAWTAII 354
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 256/412 (62%), Gaps = 3/412 (0%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+V L+N+++A + D ++ ++ + LGR++H + +G V V +LI
Sbjct: 355 SVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLIS 414
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MYA C + A +F ++ + ++ W +M+ +++VG++ AR F+ M+ KNVI+W
Sbjct: 415 MYAKCDNLQSAESIFRFMNEK--DIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWN 472
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
++ Y Q + + ++ M E +V+PD + + CA LGA +LG+ I +
Sbjct: 473 AMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK 532
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL + NA+I MY+K G+I +A +VF+ + K +++W MI G + HG+G++A+++
Sbjct: 533 VGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEI 592
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F + + KP+ I+++A+LS C H GLV+ G+ YF++MK + I P +E + CM+DLLG
Sbjct: 593 FDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLG 652
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG+L EA+ L+ MP + A +WG+LL+A I+G+ EL E A +H+ +L+ +SG+Y +
Sbjct: 653 RAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYML 712
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
++ IYA G+ ++S +IRK+MRD G+KK PG S++EV+ +VH F A D SHP
Sbjct: 713 MAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHP 764
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 191/377 (50%), Gaps = 11/377 (2%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA-LRPDNYSFPF 81
LG A +F DV +NT + Q+ L ++ + + S P+ ++F +
Sbjct: 84 LGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAY 143
Query: 82 VLKAVVKLSTIELGREI--HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
+K+ L L ++ Q G+ DSDV AAL+ M+ C + A ++F + +
Sbjct: 144 AMKSCGALGERSLALQLLGMVQKFGSQDDSDV--AAALVDMFVRCGTVDLASRLF--VRI 199
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
+ + N+M+ GY K +++A LF+ M E++V+SW +++ +Q + EA+ +
Sbjct: 200 KEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVV 259
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKS 258
MQ + V+ D ++L+ACA+L ++ G+ +H + + L I P + +AL+++YAK
Sbjct: 260 DMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPCIDPYVASALVELYAKC 318
Query: 259 GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAIL 318
G +A VF ++ +++ + WT +IAG HG E++++F++M + ++ ++
Sbjct: 319 GCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLI 378
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
S CC + LGR+ ++ I+ + +I + + LQ AE + R M E +
Sbjct: 379 SGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAESIFRFMN-EKD 436
Query: 379 AAIWGSLLAASNIYGDV 395
W S++ A + G++
Sbjct: 437 IVSWTSMITAHSQVGNI 453
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 199/471 (42%), Gaps = 83/471 (17%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D+A +F + DV +N + AL Q+ A+ + +Q+ +R D+ ++ L A
Sbjct: 221 DHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC 280
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+LS++ G+++H Q + D +V +AL+++YA C C +A+ VF+ L R N
Sbjct: 281 ARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDR--NNVA 338
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
W ++AG+ + G E++ LF +M+ E +
Sbjct: 339 WTVLIAGFLQHGCF-------------------------------TESVELFNQMRAELM 367
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKS-------- 258
D+ A+ +S C + LG +H+ + G V ++N+LI MYAK
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAES 427
Query: 259 -----------------------GKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
G I KA + F+ M K+VITW M+ HG +
Sbjct: 428 IFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDG 487
Query: 296 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
L M++ M V+P+ +T++ + C +G +LG + + G+ +I
Sbjct: 488 LRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIG-RTVKVGLILDTSVANAVI 546
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
+ + G + EA K+ + + + W +++ + +G +G+ A++ I + G
Sbjct: 547 TMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHG---MGKQAIE--IFDDILKRG 600
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAG 465
+ A+L + SG +++ G SY ++ KRVH G
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQE-----------GKSYFDMMKRVHNISPG 640
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 149/323 (46%), Gaps = 37/323 (11%)
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + V GL S V + L+ Y SC + DAR++ + NV N M+ GY K+G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLL-LTDIAHPNVITHNVMLNGYVKLG 85
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAAL 217
L++A LF M ++V SW TL++GY Q Q ++ F M + P+ A+
Sbjct: 86 RLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAM 145
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK----------------- 260
+C LG L + ++++G + AL+DM+ + G
Sbjct: 146 KSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIF 205
Query: 261 --------------IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ AL++F++M + V++W M++ L+ G REALDM M+
Sbjct: 206 CRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265
Query: 307 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
V+ + T+ + L+AC + + G++ + ++++ I+P + +++L + G +E
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVAS--ALVELYAKCGCFKE 323
Query: 366 AEKLLRRMPFEANAAIWGSLLAA 388
A+ + + N A W L+A
Sbjct: 324 AKGVFNSLHDRNNVA-WTVLIAG 345
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 270/465 (58%), Gaps = 18/465 (3%)
Query: 40 DVYLYNTTI-KALCQTDNPLNAVILYNKIQA-SALRPDNYSFPFVLKAVVKLSTIELGRE 97
DV + +TI +A Q D A L + + +A P++ + VL A + L
Sbjct: 31 DVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLASP 90
Query: 98 IHCQTVGTGL---DSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGY 154
+ L S + + L + Y + + + A ++FD + +R +V +NTM++G
Sbjct: 91 LALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDSMPVR--SVVTYNTMISGL 148
Query: 155 AKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAML 214
+ G ++ A +F+ M + +SWT LI G+ + + +EAI FR M ++ V+ D I ++
Sbjct: 149 MRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLV 208
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK 274
A +SACA++GA+ LG W+H + + L V + N+LIDMYA+ G++ A QVF +++ +
Sbjct: 209 AVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKR 268
Query: 275 SVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYF 334
+V++W +MI G A +G +A+++F M R KP+ +T +L+AC H GL E G RY+
Sbjct: 269 TVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYY 328
Query: 335 NIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGD 394
++M + YG+ ++E YGC++DLLGRAG L EA ++ MP N + G+LLA +G+
Sbjct: 329 DLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRTHGN 388
Query: 395 VELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIE 454
+++ E +QHL +L+P NY +LSNIYA +G+W+ +GK+R +M+ GVKK PG S +E
Sbjct: 389 LDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSTVE 448
Query: 455 VSKRVHEFVAGDTSHPDFDRLYQIL-----------CKINGQMKF 488
+ VHEFV+GD SHP + Q+L C ++G F
Sbjct: 449 IDGDVHEFVSGDQSHPLAGEIGQMLGLLWHEMTRYGCDVHGGSSF 493
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 43/304 (14%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR + N ++S + + G D A+ +F PD + I + A
Sbjct: 133 MPVRSVVTYNTMISGLMRN----GLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEA 188
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ + + + D + V+ A ++ + LG +H + L+ +V V +LI M
Sbjct: 189 IDCFRAMLLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDM 248
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A +VF S+R V WN+M+ G+A G
Sbjct: 249 YARCGQVNLAAQVFR--SIRKRTVVSWNSMIVGFAANG---------------------- 284
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQY 239
+ +AI LF M+ + KPD + + L+AC+ G E G ++ + +Y
Sbjct: 285 ---------RCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEY 335
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDM 298
G+ + ++D+ ++G++ +A+ V E M + + + ++AG HG LDM
Sbjct: 336 GVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRTHG----NLDM 391
Query: 299 FSRM 302
+M
Sbjct: 392 AEQM 395
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 39/236 (16%)
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--DEIAMLAALSACAQLGAVELGE 230
++V+SWT+ I+ A+ + A M P +++ +L LSACA + L
Sbjct: 30 RDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLAS 89
Query: 231 WIHNYIEQYGLNTIVP----LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGL 286
+ + L + P L+ L Y S ALQ+F++M +SV+T+ TMI+GL
Sbjct: 90 PLALTLHARALK-LFPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMISGL 148
Query: 287 ALHGL-----------------------------GR--EALDMFSRMERARVKPNEITFI 315
+GL GR EA+D F M V+ + IT +
Sbjct: 149 MRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLV 208
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
A++SAC VG + LG + + + R +E + +ID+ R G + A ++ R
Sbjct: 209 AVVSACAEVGALGLG-MWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFR 263
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 258/444 (58%), Gaps = 4/444 (0%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G D A +F D++ + I + D A+ +++ ++ D V+
Sbjct: 214 GMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVV 273
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
A + I+ G+ H + GL S V+V ALI MY+SC ++ AR++FD S +
Sbjct: 274 SACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFD--SGECLD 331
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
WN+M+AGY K G + +A ALF M K+ +SW+T+I+G Q +Q ++A+T+F MQ
Sbjct: 332 QYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQA 391
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ ++PDE+ +++ +SAC L A+E G+ +H YI+Q + L +LI+MY K G +
Sbjct: 392 QGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEA 451
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILSACC 322
AL+ F M+ K W +I GLA++GL ++LDMFS ME + PNEITF +LSAC
Sbjct: 452 ALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACR 511
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H GLV+ GR +F +M+ RY I P I YGCM+DLLGRAGY++EAE +++ MP + W
Sbjct: 512 HAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAW 571
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
G+LL A +G+ E+GE + L+ +P + G +LSNIYA G W +R M+
Sbjct: 572 GALLGACWKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDDLRGSMKQR 631
Query: 443 GVKKMPGCSYIEVSKRVHEFVAGD 466
V+K+ G S ++ S +E +AGD
Sbjct: 632 HVQKVSGHSVVK-SSHSYEILAGD 654
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 172/362 (47%), Gaps = 67/362 (18%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P+ + NT +K+ P + LY + A PD+Y+ P + A + GR++
Sbjct: 69 PNAFSCNTLLKSALIGGMPHLCLPLYASLPAP---PDSYTHPILAAACASRKDVIEGRQV 125
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H V G ++++ ALI MY++C C++DAR+VFD + VW+ WNT++A Y G
Sbjct: 126 HAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFD--AGPVWDAVSWNTILAAYVHAG 183
Query: 159 DLNNARALFELMTEKN-------------------------------VISWTTLIAGYAQ 187
D++ A +F M ++N + +WT +I+ + +
Sbjct: 184 DVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFER 243
Query: 188 MDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPL 247
D EA+ +F M+ E DE M++ +SACAQ ++ G+ H + + GL + V +
Sbjct: 244 NDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNV 303
Query: 248 NNALIDMYA-------------------------------KSGKIGKALQVFENMKNKSV 276
NALI MY+ K+G + A+ +F M NK
Sbjct: 304 QNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDN 363
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
++W+T+I+G + +AL +F M+ ++P+E+T ++++SAC ++ +E G+
Sbjct: 364 VSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEY 423
Query: 337 MK 338
+K
Sbjct: 424 IK 425
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 15/226 (6%)
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 225
L L+ N S TL+ P+ + L+ + PD +ACA
Sbjct: 62 LLRLVRYPNAFSCNTLLKSALIGGMPHLCLPLYASLPA---PPDSYTHPILAAACASRKD 118
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
V G +H + +G + L NALI MY+ G + A +VF+ ++W T++A
Sbjct: 119 VIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSWNTILAA 178
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
G +A+++F++M K N +++S G+V+ RR F+ + R
Sbjct: 179 YVHAGDVDQAVEVFAQMP----KRNATAVSSMVSLFGRRGMVDEARRVFDAAECR----- 229
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKL---LRRMPFEANAAIWGSLLAA 388
I + MI R EA + +RR + + + S+++A
Sbjct: 230 DIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSA 275
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 272/487 (55%), Gaps = 36/487 (7%)
Query: 5 GLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVI 62
GL ++ S + +C S G +YA SIF +P + YNT I+ + N A++
Sbjct: 57 GLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALL 116
Query: 63 LYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYA 122
LY ++ + PDN+++PFVLKA L ++ G +IH GL+ DV V LI MY
Sbjct: 117 LYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYG 176
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI 182
K G + +A +FE M EK+V SW+++I
Sbjct: 177 ---------------------------------KCGAIEHASVVFEQMDEKSVASWSSII 203
Query: 183 AGYAQMDQPNEAITLFRRMQVENV-KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+A ++ +E + L M E + +E +++ALSAC LG+ G IH + +
Sbjct: 204 GAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNIS 263
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V + +LIDMY KSG + K L VF+NM K+ ++T +I GLA+HG GREAL +FS
Sbjct: 264 ELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSD 323
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M + P+++ ++ +LSAC H GLV G + FN ++ + I+P I+ YGCM+DL+GRAG
Sbjct: 324 MLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAG 383
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L+ A L++ MP + N +W SLL+A ++ ++E+GE A +++ KL HN G+Y +L+N
Sbjct: 384 MLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLAN 443
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
+YA +W + +IR M + + + PG S +E ++ V++FV+ D S P + +Y ++ +
Sbjct: 444 MYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQ 503
Query: 482 INGQMKF 488
+ Q+KF
Sbjct: 504 MEWQLKF 510
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 14/216 (6%)
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT+++ + PN NV+ LS + ++E + +H +
Sbjct: 1 MSWTSVLCQSHFLSLPNNPPQSSELNAKFNVQ--------GLSLLKRCKSMEEFKQVHAH 52
Query: 236 IEQYGL--NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
I + GL ++ N ++ G + A +F ++ + TMI G
Sbjct: 53 ILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLE 112
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGC 352
EAL ++ M ++P+ T+ +L AC +G ++ G + + ++ K+ G+E +
Sbjct: 113 EALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKA--GLEGDVFVQNG 170
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+I++ G+ G ++ A + +M E + A W S++ A
Sbjct: 171 LINMYGKCGAIEHASVVFEQMD-EKSVASWSSIIGA 205
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 238/377 (63%), Gaps = 5/377 (1%)
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
++I C + DA+ +FD + R ++ W M+ GYAK G ++ AR+LF+ M E++V
Sbjct: 263 SMIDGCVKCGRMEDAQGLFDRMPNR--DIVSWANMIDGYAKNGRVDIARSLFDEMPERDV 320
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+++ ++ GY Q EA+ +F MQ + N D +L ALSA AQLG ++ G IH
Sbjct: 321 VAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHR 380
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
+IE+ G + L ALIDMY+K G I A+ VFEN+K KSV W +I GLA+HGLG
Sbjct: 381 FIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGEL 440
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A D MER RV+P++ITFI +L+AC H GLV+ G F +M+ + +EPK++ YGCM+
Sbjct: 441 AFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMV 500
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
D+LGRAG+++EA+ + MPFE N IW SLL+A + +G+ ++L++L+ +
Sbjct: 501 DILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPS 560
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
+Y + SN+YA LG+WN+ K+R +M+ +KK+PGCS+IE+ V+ F D SHP F
Sbjct: 561 SYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSG 620
Query: 475 LYQILCKINGQMKFAEH 491
+Y IL ++ M +EH
Sbjct: 621 IYSILDSLS--MTDSEH 635
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 178/381 (46%), Gaps = 37/381 (9%)
Query: 42 YLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQ 101
+L+N IK +P A+ L + + + D ++ VLKA ++ ++ G +IH
Sbjct: 93 FLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGL 152
Query: 102 TVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLN 161
SD+ + LI Y C C+ A +VFD + R + +N+M+ GY K G ++
Sbjct: 153 LKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKR--DSVSYNSMIDGYVKGGRID 210
Query: 162 NARALFEL--MTEKNVISWTTLIAGYAQM-DQPNEAITLFRRMQVENVKPDEIAMLAALS 218
AR +F+ + E+N+ISW +LI GYAQ D A LF +M + D I+ + +
Sbjct: 211 LARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMP----ERDLISWNSMID 266
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
C + G +E + + + + IV N +ID YAK+G++ A +F+ M + V+
Sbjct: 267 GCVKCGRMEDAQGLFDRMPN---RDIVSWAN-MIDGYAKNGRVDIARSLFDEMPERDVVA 322
Query: 279 WTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLVELGRRYFNIM 337
+ M+ G +G EAL +F M+ + T + LSA +G ++ G
Sbjct: 323 YNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKG------- 375
Query: 338 KSRYGIEPKIEQYG---------CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
I IE+ G +ID+ + G ++ A + + E + W +++
Sbjct: 376 ---VAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIK-EKSVDHWNAIIGG 431
Query: 389 SNIYGDVELGECALQHLIKLE 409
I+G LGE A L+++E
Sbjct: 432 LAIHG---LGELAFDFLMEME 449
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 40/281 (14%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA-L 72
+ ID + G D A S+F + DV YN + Q + A+ ++ +Q+
Sbjct: 293 ANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNF 352
Query: 73 RPDNYSFPFVLKAVVKLSTIELGREIH--CQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
DN + L A+ +L I+ G IH + +G LD + V ALI MY+ C I +A
Sbjct: 353 LLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGV--ALIDMYSKCGSIENA 410
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
VF+ + EK+V W +I G A
Sbjct: 411 MMVFENIK---------------------------------EKSVDHWNAIIGGLAIHGL 437
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ-YGLNTIVPLNN 249
A M+ V+PD+I + L+AC G V+ G + + + + +
Sbjct: 438 GELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYG 497
Query: 250 ALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
++D+ ++G I +A E M + + W ++++ H
Sbjct: 498 CMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTH 538
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 254/456 (55%), Gaps = 33/456 (7%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F K D+ +NT I Q +A+++ ++ + LRPD+++ VL +
Sbjct: 192 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 251
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ G+EIH + G D+DV + ++LI MYA C + D+ +V
Sbjct: 252 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRV------------------ 293
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
F ++ + + ISW ++IAG Q +E + F++M + +KP+ +
Sbjct: 294 ---------------FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHV 338
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ + + ACA L + LG+ +H YI + + V + +AL+DMYAK G I A +F+ M
Sbjct: 339 SFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKM 398
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ +++WT MI G ALHG +A+ +F RME VKPN + F+A+L+AC H GLV+
Sbjct: 399 ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAW 458
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
+YFN M Y I P +E Y + DLLGR G L+EA + + M E ++W +LLAA +
Sbjct: 459 KYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRV 518
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+ ++EL E + L ++P N G Y +LSNIY+ GRW ++ K+R MRD G+KK P CS
Sbjct: 519 HKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACS 578
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+IE+ +VH FVAGD SHP +DR+ + L + QM+
Sbjct: 579 WIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQME 614
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 198/397 (49%), Gaps = 15/397 (3%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNA 60
I+R + LLS + S+L + IF S P + + I+ L++
Sbjct: 31 ILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHS 90
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ + ++ AS PD+ FP VLK+ + + G +H + G+ D++ AL+ M
Sbjct: 91 LSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNM 150
Query: 121 YA---SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
Y+ S + + +KVFDE V++ +G L R +FE+M +++++S
Sbjct: 151 YSKFWSLEEVNTYKKVFDEGK----TSDVYSKKEKESYYLGSL---RKVFEMMPKRDIVS 203
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W T+I+G AQ +A+ + R M +++PD + + L A+ + G+ IH Y
Sbjct: 204 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 263
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ G + V + ++LIDMYAK ++ + +VF + I+W ++IAG +G+ E L
Sbjct: 264 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 323
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDL 356
F +M A++KPN ++F +I+ AC H+ + LG++ I++SR+ + + ++D+
Sbjct: 324 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF--DGNVFIASALVDM 381
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ G ++ A + +M + W +++ ++G
Sbjct: 382 YAKCGNIRTARWIFDKMEL-YDMVSWTAMIMGYALHG 417
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 139/290 (47%), Gaps = 35/290 (12%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G D + + S ID + D + +F + D +N+ I Q +
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ ++ + ++P++ SF ++ A L+T+ LG+++H + + D +V + +AL+ MY
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 382
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C I AR +FD++ L +++ W M+ GYA
Sbjct: 383 AKCGNIRTARWIFDKMEL--YDMVSWTAMIMGYA-------------------------- 414
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-ELGEWIHNYIEQYG 240
+ G+A +AI+LF+RM+VE VKP+ +A +A L+AC+ G V E ++ ++ + Y
Sbjct: 415 LHGHAY-----DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYR 469
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ + A+ D+ + G++ +A + +M + W+T++A +H
Sbjct: 470 IIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVH 519
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 283/493 (57%), Gaps = 7/493 (1%)
Query: 2 IVRGLDQ-NNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++R L Q + ++ S I+ + G A +F + + I Q + +
Sbjct: 296 VIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS 355
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V L+N+++A + D ++ ++ + LGR++H + +G + + V +LI +
Sbjct: 356 VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISL 415
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + +A VF +S R ++ W +M+ Y+++G++ AR F+ M +N I+W
Sbjct: 416 YAKCGDLQNAEFVFSSMSER--DIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNA 473
Query: 181 LIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
++ Y Q + + ++ M ++V PD + + CA +GA +LG+ I + +
Sbjct: 474 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA 533
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL V + NA I MY+K G+I +A ++F+ + K V++W MI G + HG+G++A F
Sbjct: 534 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 593
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M KP+ I+++A+LS C H GLV+ G+ YF++M +GI P +E + CM+DLLGR
Sbjct: 594 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 653
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG+L EA+ L+ +MP + A +WG+LL+A I+G+ EL E A +H+ +L+ +SG+Y +L
Sbjct: 654 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLL 713
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
+ IY+ G+ ++S ++RK+MRD G+KK PG S++EV +VH F A D SHP ++ I
Sbjct: 714 AKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHP---QVIAIR 770
Query: 480 CKINGQMKFAEHL 492
K++ M+ HL
Sbjct: 771 NKLDELMEKIAHL 783
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 187/370 (50%), Gaps = 9/370 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR-PDNYSFPFVLKAVV 87
A +F + DV +NT + Q L+ + + + S P+ ++F V+K+
Sbjct: 90 AEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCG 149
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
L EL ++ D V AL+ M+ C + A ++F ++ +
Sbjct: 150 ALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP--TIFCR 207
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N+M+AGYAK+ +++A FE M E++V+SW +IA +Q + EA+ L M + V+
Sbjct: 208 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP-LNNALIDMYAKSGKIGKALQ 266
D ++L+ACA+L ++ G+ +H + + L I P + +ALI++YAK G +A +
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIR-SLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
VF ++++++ ++WT +I G + +++++F++M + ++ ++S C +
Sbjct: 327 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMD 386
Query: 327 VELGRRYFNI-MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ LGR+ ++ +KS G I +I L + G LQ AE + M E + W S+
Sbjct: 387 LCLGRQLHSLCLKS--GHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSM 443
Query: 386 LAASNIYGDV 395
+ A + G++
Sbjct: 444 ITAYSQIGNI 453
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 165/376 (43%), Gaps = 66/376 (17%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D+A F ++ DV +N I AL Q+ A+ L ++ +R D+ ++ L A
Sbjct: 221 DHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTAC 280
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L ++ G+++H + + + D +V +ALI++YA C +A++VF+ L
Sbjct: 281 ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-------- 332
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
++N +SWT LI G Q + ++++ LF +M+ E +
Sbjct: 333 -------------------------DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------- 259
D+ A+ +S C + LG +H+ + G N + ++N+LI +YAK G
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427
Query: 260 ---------------------KIG---KALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+IG KA + F+ M ++ ITW M+ HG +
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDG 487
Query: 296 LDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
L M+S M + V P+ +T++ + C +G +LG + + G+ + I
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVSVANAAI 546
Query: 355 DLLGRAGYLQEAEKLL 370
+ + G + EA+KL
Sbjct: 547 TMYSKCGRISEAQKLF 562
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 37/330 (11%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + V GL S V + L+ Y SC + DAR++ ++ NV N M+ GYA
Sbjct: 24 RALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLL-RADIKEPNVITHNIMMNGYA 82
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAML 214
K G L++A LF+ M ++V SW TL++GY Q + + + F M + P+
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 215 AALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG--------------- 259
+ +C LG EL + ++ + AL+DM+ + G
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 260 ----------------KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
I A++ FE+M + V++W MIA L+ G REAL + M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R V+ + T+ + L+AC + + G++ + +++S I+P + +I+L + G
Sbjct: 263 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS--ALIELYAKCGS 320
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIY 392
+EA+++ + + N+ W L+ S Y
Sbjct: 321 FKEAKRVFNSLQ-DRNSVSWTVLIGGSLQY 349
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 36/196 (18%)
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE-N 270
A+ AL +C GA+ +H + GL + V L N L+ Y G + A ++ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 271 MKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK---------------------- 308
+K +VIT M+ G A G +A ++F RM R V
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 309 ----------PNEITFIAILSACCHVGLVELGRRYFNIM-KSRYGIEPKIEQYGCMIDLL 357
PN TF ++ +C +G EL + + K + +P +E ++D+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET--ALVDMF 183
Query: 358 GRAGYLQEAEKLLRRM 373
R GY+ A +L ++
Sbjct: 184 VRCGYVDFASRLFSQI 199
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 258/440 (58%), Gaps = 6/440 (1%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE--LGREIHCQ 101
+ + I L + A ++ ++ + + P++ +F +L S+ LG +H
Sbjct: 28 WTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALGDLLHGY 87
Query: 102 TVGTGLD-SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
G D + V V A++ MY+ + AR VFD + + N WNTM+ GY + G +
Sbjct: 88 ACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDK--NSVTWNTMIDGYMRNGQV 145
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
+NA +F+ M E+++ISWT +I G+ + EA+ FR MQ+ VKPD +A++AAL+AC
Sbjct: 146 DNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNAC 205
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
LGA+ G W+H Y+ V ++N+LID+Y + G + A +VF+ M+ ++V++W
Sbjct: 206 TNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWN 265
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
++I G A +G E+L F +M+ KP+ +TF L+AC HVGLVE G RYF MK
Sbjct: 266 SVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRD 325
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGE 399
+ I P+IE YGC++DL RAG L+EA K+++ MP + N + GSLLAA +G + L E
Sbjct: 326 HRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAE 385
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
++HL + NY ILSN+YA G+W + ++R+ M+ +G+KK PG S IE+
Sbjct: 386 RLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFSSIEIDDCT 445
Query: 460 HEFVAGDTSHPDFDRLYQIL 479
H F+AGD++H + + ++L
Sbjct: 446 HVFMAGDSAHVETADIREVL 465
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 35/286 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D+N+ + ID G D A +F + D+ + I + A+ + +
Sbjct: 126 DKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFRE 185
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S ++PD + L A L + G +H + ++V V +LI +Y C C
Sbjct: 186 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGC 245
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VFD++ R V WN+++ G+A G+
Sbjct: 246 VEFAREVFDKMEKRT--VVSWNSVIVGFAANGN--------------------------- 276
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIV 245
+E++ FR+MQ E KPD + AL+AC+ +G VE G + + ++ +
Sbjct: 277 ----AHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRI 332
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
L+D+Y+++G++ +AL+V ++M K + + +++A HG
Sbjct: 333 EHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRTHG 378
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 42/253 (16%)
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 228
T + ++SWT+ I + + EA F M++ V+P+ I +A LS C G+ L
Sbjct: 21 TSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEAL 80
Query: 229 GEWIHNYIEQYGLN-TIVPLNNALIDMYAK------------------------------ 257
G+ +H Y + G + T V + A++ MY+K
Sbjct: 81 GDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYM 140
Query: 258 -SGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
+G++ A+++F+ M + +I+WT MI G G EAL F M+ + VKP+ + IA
Sbjct: 141 RNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 200
Query: 317 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
L+AC ++G + G RY +M + K+ +IDL R G ++ A ++ +M
Sbjct: 201 ALNACTNLGALSFGLWVHRY--VMSQDFKNNVKVSN--SLIDLYCRCGCVEFAREVFDKM 256
Query: 374 PFEANAAIWGSLL 386
+ W S++
Sbjct: 257 E-KRTVVSWNSVI 268
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 34/155 (21%)
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC--- 321
+Q ++++++WT+ I L +G EA FS M A V+PN ITFIA+LS C
Sbjct: 14 IQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDF 73
Query: 322 ---------------CHVG-----------LVELGRRYFNIMKSR----YGIEPKIEQYG 351
C +G ++ + ++ + K+R Y + +
Sbjct: 74 SSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWN 133
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
MID R G + A K+ +MP E + W +++
Sbjct: 134 TMIDGYMRNGQVDNAVKMFDKMP-ERDLISWTAMI 167
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 270/477 (56%), Gaps = 37/477 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F + D ++ I + + + ++ + +PDN+S PFV+KA
Sbjct: 54 AHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRD 113
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ +GR IH + GL D V + L+ MYA
Sbjct: 114 TMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYA-------------------------- 147
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
K G ++NA+ LF+ M +K++++ T +IAGYA+ +PNE+ LF +M+ + P
Sbjct: 148 -------KCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVP 200
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYI--EQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
D++AM+ ++ACA+LGA+ +H+Y+ +Y L+ V L A+IDMYAK G I + +
Sbjct: 201 DKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD--VELGTAMIDMYAKCGSIDSSRE 258
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F+ M+ K+VI+W+ MI HG GREAL++F M + + PN ITFI++L AC H GL
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ G + F++M YG+ P ++ Y CM+DLLGRAG L +A +L+ M E + IW + L
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFL 378
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A I+ V+L E A + L+ L+ N G+Y +LSNIYA GRW + KIR +M +KK
Sbjct: 379 GACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKK 438
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
+PG ++IEV ++ F AGD SH + +Y++L ++ +++ A ++ + S + + D
Sbjct: 439 IPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVD 495
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 138/280 (49%), Gaps = 6/280 (2%)
Query: 117 LIQMYASCKCIYDARKVFDELSLR--VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
I C+ I+ ++V +++ + ++ V N ++ AK DL A LF M E++
Sbjct: 6 FISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERD 65
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
+SW+ +I G+ + FR + KPD ++ + AC + +G IH+
Sbjct: 66 PVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHS 125
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
+ + GL+ + + L+DMYAK G I A Q+F+ M K ++T T MIAG A G E
Sbjct: 126 TVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNE 185
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCM 353
+ +F +M R P+++ + I++AC +G + R + + RY ++ +E M
Sbjct: 186 SWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD--VELGTAM 243
Query: 354 IDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
ID+ + G + + ++ RM + N W +++ A +G
Sbjct: 244 IDMYAKCGSIDSSREIFDRME-QKNVISWSAMIGAYGYHG 282
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 35/287 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL +N + S +D + G D A +F K D+ I + P + +L+
Sbjct: 131 GLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLF 190
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++++ PD + ++ A KL + R +H DV + A+I MYA C
Sbjct: 191 DQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKC 250
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
I +R++FD + + NV W+ M+ Y G
Sbjct: 251 GSIDSSREIFDRMEQK--NVISWSAMIGAYGYHG-------------------------- 282
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNT 243
Q EA+ LF M + P+ I ++ L AC+ G V+ G + + + YG+
Sbjct: 283 -----QGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRP 337
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
V ++D+ ++G++ +AL++ ENM+ K W + +H
Sbjct: 338 DVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIH 384
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 289/565 (51%), Gaps = 77/565 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MIV G LL +++ CS + A+ +F +V L+N + A + DN +
Sbjct: 349 MIVEGA-----LLDLYVN-CSDI---KTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA----- 115
++ ++Q L P+ +++P +L+ + ++LG +IH Q + TG +V+V +
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM 459
Query: 116 --------------------------ALIQMYASCKCIYDARKVFDELSLR--------- 140
ALI YA +A K F E+ R
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519
Query: 141 ----------------------------VWNVAVWNTMVAGYAKVGDLNNARALFELMTE 172
++++ N +V+ YA+ G + A FE +
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579
Query: 173 KNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWI 232
K+ ISW LI+G+AQ +A+ +F +M ++ +A+SA A + ++ G+ I
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639
Query: 233 HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLG 292
H I + G ++ + ++NALI YAK G I A + F M K+ ++W MI G + HG G
Sbjct: 640 HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYG 699
Query: 293 REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGC 352
EA+++F +M++ PN +TF+ +LSAC HVGLV G YF M +G+ PK Y C
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYAC 759
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHN 412
++DL+ RAG+L A K + MP E +A IW +LL+A ++ +VE+GE A QHL++LEP +
Sbjct: 760 VVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPED 819
Query: 413 SGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF 472
S Y +LSN+YA+ G+W+ + R++MR+ GVKK PG S+IEV VH F GD HP
Sbjct: 820 SATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLA 879
Query: 473 DRLYQILCKINGQMKFAEHLQNEFS 497
D++Y+ L ++N + + Q+ +S
Sbjct: 880 DKIYEFLAELNKKAAEIGYFQDRYS 904
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 38/340 (11%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F+ D +N+ I L Q A+ L+ K++ L+PD + +L A
Sbjct: 267 AEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACAS 326
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ G ++H + G+ SD+ V AL+ +Y +C
Sbjct: 327 NGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCS----------------------- 363
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
D+ A +F +NV+ W ++ + ++D +E+ +FR+MQ++ + P
Sbjct: 364 ----------DIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIP 413
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++ + L C +GA++LGE IH + + G V + + LIDMYAK GK+ A +
Sbjct: 414 NQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVIL 473
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ V++WT +I+G A H L EAL F M ++ + I F + +SAC + +
Sbjct: 474 RTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALN 533
Query: 329 LGRRYFNIMKSRY--GIEPKIEQYGCMIDLLGRAGYLQEA 366
GR+ I Y G + ++ L R G ++EA
Sbjct: 534 QGRQ---IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 8/230 (3%)
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N +V Y +GDL+ +FE M ++V SW +I+G+ + N + LF M ENV
Sbjct: 49 NKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVS 108
Query: 208 PDEIAMLAALSACA--QLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
P EI+ + L AC+ ++G + E IH I +GL ++N LI +YAK+G I A
Sbjct: 109 PTEISFASVLRACSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISAR 167
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
+VF+N+ K ++W MI+G + +G EA+ +F M A + P F ++LS C +
Sbjct: 168 KVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIK 227
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGC--MIDLLGRAGYLQEAEKLLRRM 373
L ++G + + + +YG +E Y C ++ L R AEK+ +M
Sbjct: 228 LFDVGEQ-LHALVFKYG--SSLETYVCNALVTLYSRMPNFVSAEKVFSKM 274
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 167/385 (43%), Gaps = 36/385 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + L ++ +D +LG D +F V ++ I + + L+
Sbjct: 40 GFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLF 99
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLST-IELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ + + P SF VL+A I +IH + + GL + LI +YA
Sbjct: 100 SCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAK 159
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
I ARKVFD L + + +SW +I+
Sbjct: 160 NGLIISARKVFDNLCTK---------------------------------DSVSWVAMIS 186
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
G++Q EAI LF M + P + LS C ++ ++GE +H + +YG +
Sbjct: 187 GFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSL 246
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ NAL+ +Y++ A +VF M++K +++ ++I+GLA G AL++F++M+
Sbjct: 247 ETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMK 306
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
R +KP+ +T ++LSAC G + G + + + + GI + G ++DL +
Sbjct: 307 RDYLKPDCVTVASLLSACASNGALCKGEQLHSYV-IKAGISSDMIVEGALLDLYVNCSDI 365
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAA 388
+ A ++ E N +W +L A
Sbjct: 366 KTAHEMFLTAQTE-NVVLWNVMLVA 389
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 171/378 (45%), Gaps = 40/378 (10%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F + D + I Q A+ L+ ++ + + P Y F VL K
Sbjct: 166 ARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTK 225
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ ++G ++H G + +V AL+ +Y+ A KVF ++ + + +N
Sbjct: 226 IKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSK--DEVSFN 283
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
++++G A+ G + A+ LF +M+ + +KP
Sbjct: 284 SLISGLAQQG-------------------------------FSDGALELFTKMKRDYLKP 312
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D + + + LSACA GA+ GE +H+Y+ + G+++ + + AL+D+Y I A ++F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ ++V+ W M+ E+ +F +M+ + PN+ T+ +IL C VG ++
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD 432
Query: 329 LGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
LG + + ++K+ G + + +ID+ + G L A +LR + E + W +L++
Sbjct: 433 LGEQIHTQVIKT--GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALIS 489
Query: 388 ASNIYGDVELGECALQHL 405
Y L AL+H
Sbjct: 490 G---YAQHNLFAEALKHF 504
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 217 LSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
L C G++ + +H I + G L N L+D+Y G + ++VFE+M N+SV
Sbjct: 17 LDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSV 76
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
+W +I+G + LD+FS M V P EI+F ++L AC
Sbjct: 77 RSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRAC 121
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 264/467 (56%), Gaps = 42/467 (8%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+YA SIF P + +NT I+ + A+ YN++ PDN+++P +LKA
Sbjct: 83 NYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKAC 142
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L +I G++IH Q GL++DV V +LI MY
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYG------------------------ 178
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 205
+ G++ + A+FE + K SW+++++ A M +E + LFR M E N
Sbjct: 179 ---------RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETN 229
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSGKI 261
+K +E M++AL ACA GA+ LG IH ++ L I LN +L+DMY K G +
Sbjct: 230 LKAEESGMVSALLACANTGALNLGMSIHGFL----LRNISELNIIVQTSLVDMYVKCGCL 285
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
KAL +F+ M+ ++ +T++ MI+GLALHG G AL MFS+M + ++P+ + ++++L+AC
Sbjct: 286 DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNAC 345
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV+ GRR F M +EP E YGC++DLLGRAG L+EA + ++ +P E N I
Sbjct: 346 SHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI 405
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W + L+ + ++ELG+ A Q L+KL HN G+Y ++SN+Y+ W++ + R +
Sbjct: 406 WRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAI 465
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
G+K+ PG S +E+ + H FV+ D SHP +Y++L ++ Q+KF
Sbjct: 466 KGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 512
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+N A ++F + + + T+I GY + EA+ + M +PD L A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C +L ++ G+ IH + + GL V + N+LI+MY + G++ + VFE +++K+ +W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 280 TTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
++M++ A G+ E L +F M +K E ++ L AC + G + LG +
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL- 260
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
R E I ++D+ + G L +A + ++M + N + ++++ ++G+ G
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGE---G 316
Query: 399 ECALQHLIKL 408
E AL+ K+
Sbjct: 317 ESALRMFSKM 326
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 283/560 (50%), Gaps = 72/560 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ N HL + ++ G A ++F DV +N+ I Q + A L+
Sbjct: 461 GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLF 520
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L PDN +F VL +ELG++IH + +GL DV++ ALI MY C
Sbjct: 521 QEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRC 580
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTE------------ 172
+ DAR VF L R +V W M+ G A G+ A LF M
Sbjct: 581 GSLQDARNVFHSLQHR--DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSS 638
Query: 173 --------------KNVISW-------------TTLIAGYAQMDQPNEAITLFRR----- 200
K VI++ LI+ Y++ +A +F +
Sbjct: 639 ILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRD 698
Query: 201 --------------------------MQVENVKPDEIAMLAALSACAQLGAVELGEWIHN 234
MQ ++V P++ + ++ L+AC+ A+E G+ +H
Sbjct: 699 IVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHA 758
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
I + L V + ALI MYAK G G+A +VF+N+ K+V+TW MI A HGL +
Sbjct: 759 EIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASK 818
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
AL F+ ME+ +KP+ TF +ILSAC H GLV G + F+ M+S YG+ P IE YGC++
Sbjct: 819 ALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLV 878
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
LLGRA QEAE L+ +MPF +AA+W +LL A I+G++ L E A + +KL N
Sbjct: 879 GLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPA 938
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
Y +LSN+YA GRW++ KIR+VM G++K PG S+IEV +HEF+A D SHP+
Sbjct: 939 VYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAE 998
Query: 475 LYQILCKINGQMKFAEHLQN 494
+Y L +++ +M+ A + +
Sbjct: 999 IYAELKRLSVEMEEAGYFPD 1018
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 181/372 (48%), Gaps = 34/372 (9%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+ GL+ + + + + C G D A F + DV +YN I AL Q + + A
Sbjct: 256 VEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAF 315
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
Y ++++ + + ++ +L A +E G+ IH G SDV + ALI MY
Sbjct: 316 EQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A+ GDL AR LF M ++++ISW +
Sbjct: 376 ---------------------------------ARCGDLPKARELFYTMPKRDLISWNAI 402
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
IAGYA+ + EA+ L+++MQ E VKP + L LSACA A G+ IH I + G+
Sbjct: 403 IAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGI 462
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
+ L NAL++MY + G + +A VFE + + VI+W +MIAG A HG A +F
Sbjct: 463 KSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQE 522
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M+ ++P+ ITF ++LS C + +ELG++ + + G++ + +I++ R G
Sbjct: 523 MQNEELEPDNITFASVLSGCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCG 581
Query: 362 YLQEAEKLLRRM 373
LQ+A + +
Sbjct: 582 SLQDARNVFHSL 593
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 185/385 (48%), Gaps = 40/385 (10%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +F K D+ +N I + ++ A+ LY ++Q+ ++P +F +L A
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
S G+ IH + +G+ S+ H+ AL+ MY C
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC------------------------ 479
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G L A+ +FE ++VISW ++IAG+AQ A LF+ MQ E ++P
Sbjct: 480 ---------GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D I + LS C A+ELG+ IH I + GL V L NALI+MY + G + A VF
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF 590
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+++++ V++WT MI G A G +A+++F +M+ +P + TF +IL C ++
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLD 650
Query: 329 LGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
G++ I+ S Y ++ + +I ++G + +A ++ +MP + W ++A
Sbjct: 651 EGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMP-SRDIVSWNKIIA 707
Query: 388 ASNIYGDVELGECALQHLIKLEPHN 412
Y LG+ A++ +++ +
Sbjct: 708 G---YAQNGLGQTAVEFAYQMQEQD 729
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 202/440 (45%), Gaps = 60/440 (13%)
Query: 10 NHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQA 69
N LLS + C L A +F S DV YNT + Q + L+ ++ +
Sbjct: 167 NSLLSMY-GKCGDL---PRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
+ PD ++ +L A S ++ G+ IH TV GL+SD+ V AL+ M C
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC----- 277
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
GD+++A+ F+ +++V+ + LIA AQ
Sbjct: 278 ----------------------------GDVDSAKQAFKGTADRDVVVYNALIAALAQHG 309
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNN 249
EA + RM+ + V + L+ L+AC+ A+E G+ IH++I + G ++ V + N
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN 369
Query: 250 ALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
ALI MYA+ G + KA ++F M + +I+W +IAG A EA+ ++ +M+ VKP
Sbjct: 370 ALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKP 429
Query: 310 NEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
+TF+ +LSAC + G+ + +I++S GI+ ++++ R G L EA+
Sbjct: 430 GRVTFLHLLSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMNMYRRCGSLMEAQN 487
Query: 369 LLRRMPFEANAA----IWGSLLAASNIYGDVELGECALQHLI--KLEPHNSGNYAILSNI 422
+ FE A W S++A +G E Q + +LEP N ++LS
Sbjct: 488 V-----FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC 542
Query: 423 ---------YAILGRWNESG 433
I GR ESG
Sbjct: 543 KNPEALELGKQIHGRITESG 562
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 163/360 (45%), Gaps = 35/360 (9%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A+ +F + DV +N+ I Q A L+ ++Q + P+ ++ +L A
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ +E G++IH Q + G D V +L+ MY
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYG-------------------------- 174
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
K GDL AR +F ++ ++V+S+ T++ YAQ E + LF +M E + P
Sbjct: 175 -------KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP 227
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D++ + L A ++ G+ IH + GLN+ + + AL+ M + G + A Q F
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ ++ V+ + +IA LA HG EA + + RM V N T+++IL+AC +E
Sbjct: 288 KGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
G+ + + S G ++ +I + R G L +A +L MP + + W +++A
Sbjct: 348 AGKLIHSHI-SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAG 405
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 148/329 (44%), Gaps = 35/329 (10%)
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N Q + ++ +L+ + + + IH Q V + D+ + LI MY C
Sbjct: 16 NTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKC 75
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ + DA +VF E+ R +V WN++++ YA+ G F+
Sbjct: 76 RSVLDAHQVFKEMPRR--DVISWNSLISCYAQQG--------FK---------------- 109
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
+A LF MQ P++I ++ L+AC +E G+ IH+ I + G
Sbjct: 110 -------KKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ N+L+ MY K G + +A QVF + + V+++ TM+ A +E L +F +M
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ P+++T+I +L A +++ G+R + G+ I ++ + R G +
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVD 281
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYG 393
A++ + + + ++ +L+AA +G
Sbjct: 282 SAKQAFKGTA-DRDVVVYNALIAALAQHG 309
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 268/478 (56%), Gaps = 42/478 (8%)
Query: 14 SRFIDSCS---SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS 70
+R ++ C+ S + YA I H P +N ++ L + +P +A+ + I
Sbjct: 39 TRLLEHCALSPSPAYLPYAAHIHRHIPHPSTNDFNALLRGLARGPHPTHALTFLSTI--- 95
Query: 71 ALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDA 130
L PD +F F L A + + +IH + G +D+
Sbjct: 96 -LHPDALTFSFSLIASARALALSETSQIHSHLLRRGCHADI------------------- 135
Query: 131 RKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQ 190
+ T++ YAK GDL++A+ +F+ + ++V +W LIAG AQ +
Sbjct: 136 --------------LLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSK 181
Query: 191 PNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
+EA+ LF RM+ E K +EI++L AL+AC+QLGA+ GE +H + + L+ V + NA
Sbjct: 182 SSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNA 241
Query: 251 LIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKP 309
+IDMYAK G K +VF M KSV+TW TMI A+HG G AL++F M + +V+
Sbjct: 242 VIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEM 301
Query: 310 NEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKL 369
+ +T++A+L AC H GLVE G R F+ M R G+ ++ YG ++DLLGRAG L EA ++
Sbjct: 302 DSVTYLAVLCACNHAGLVEEGVRLFDEMVGR-GVNRNVKHYGSVVDLLGRAGRLGEAYRI 360
Query: 370 LRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRW 429
+ MP + +W SLL A YG+VE+ E A + L+++ ++ G++ +LSN+YA RW
Sbjct: 361 INSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERW 420
Query: 430 NESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ G++R+ M+ V+K+PG SYIEV +H+FV GD SHPD+ +Y L +I ++K
Sbjct: 421 EDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIK 478
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 34/302 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ RG + L + ID+ + G D A +F DV +N I L Q A
Sbjct: 126 LLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEA 185
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+N+++A + + S L A +L + G +H LD +V V A+I M
Sbjct: 186 LALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDM 245
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C +VF ++ +V WNTM+ +A GD RAL
Sbjct: 246 YAKCGFADKGFRVFSTMTCGK-SVVTWNTMIMAFAMHGD--GCRAL-------------- 288
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LF M V+ D + LA L AC G VE G + + + G
Sbjct: 289 ---------------ELFEEMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGRG 333
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDMF 299
+N V +++D+ ++G++G+A ++ +M V+ W +++ +G E +M
Sbjct: 334 VNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGACKTYG-NVEMAEMA 392
Query: 300 SR 301
SR
Sbjct: 393 SR 394
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 254/456 (55%), Gaps = 33/456 (7%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLST 91
+F K D+ +NT I Q +A+++ ++ + LRPD+++ VL +
Sbjct: 152 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 211
Query: 92 IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151
+ G+EIH + G D+DV + ++LI MYA C + D+ +V
Sbjct: 212 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRV------------------ 253
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
F ++ + + ISW ++IAG Q +E + F++M + +KP+ +
Sbjct: 254 ---------------FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHV 298
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
+ + + ACA L + LG+ +H YI + + V + +AL+DMYAK G I A +F+ M
Sbjct: 299 SFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKM 358
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
+ +++WT MI G ALHG +A+ +F RME VKPN + F+A+L+AC H GLV+
Sbjct: 359 ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAW 418
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
+YFN M Y I P +E Y + DLLGR G L+EA + + M E ++W +LLAA +
Sbjct: 419 KYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRV 478
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCS 451
+ ++EL E + L ++P N G Y +LSNIY+ GRW ++ K+R MRD G+KK P CS
Sbjct: 479 HKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACS 538
Query: 452 YIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+IE+ +VH FVAGD SHP +DR+ + L + QM+
Sbjct: 539 WIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQME 574
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 171/378 (45%), Gaps = 56/378 (14%)
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS----- 123
AS PD+ FP VLK+ + + G +H + G+ D++ AL+ MY+
Sbjct: 3 ASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE 62
Query: 124 ------------------------CKCIYDARKVFDELSLRVWNVAVWNTM------VAG 153
C +D DE + N M V
Sbjct: 63 EGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNT 122
Query: 154 YAKVGD-----------------LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
Y KV D L + R +FE+M +++++SW T+I+G AQ +A+
Sbjct: 123 YKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALM 182
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYA 256
+ R M +++PD + + L A+ + G+ IH Y + G + V + ++LIDMYA
Sbjct: 183 MVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYA 242
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
K ++ + +VF + I+W ++IAG +G+ E L F +M A++KPN ++F +
Sbjct: 243 KCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSS 302
Query: 317 ILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
I+ AC H+ + LG++ I++SR+ + + ++D+ + G ++ A + +M
Sbjct: 303 IMPACAHLTTLHLGKQLHGYIIRSRF--DGNVFIASALVDMYAKCGNIRTARWIFDKMEL 360
Query: 376 EANAAIWGSLLAASNIYG 393
+ W +++ ++G
Sbjct: 361 -YDMVSWTAMIMGYALHG 377
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 139/290 (47%), Gaps = 35/290 (12%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G D + + S ID + D + +F + D +N+ I Q +
Sbjct: 223 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 282
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+ ++ + ++P++ SF ++ A L+T+ LG+++H + + D +V + +AL+ MY
Sbjct: 283 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 342
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
A C I AR +FD++ L +++ W M+ GYA
Sbjct: 343 AKCGNIRTARWIFDKMEL--YDMVSWTAMIMGYA-------------------------- 374
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-ELGEWIHNYIEQYG 240
+ G+A +AI+LF+RM+VE VKP+ +A +A L+AC+ G V E ++ ++ + Y
Sbjct: 375 LHGHAY-----DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYR 429
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
+ + A+ D+ + G++ +A + +M + W+T++A +H
Sbjct: 430 IIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVH 479
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 274/488 (56%), Gaps = 40/488 (8%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G + + + F+ + + G A +F V +N I Q +P A+
Sbjct: 263 IRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKAL 322
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
LY ++ S L PD ++ +L A L ++ G+E+H + GL+ D + +L+ +Y
Sbjct: 323 NLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLY 382
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C G+ ++AR LF+ M EK+ +SW +
Sbjct: 383 IHC---------------------------------GESSSARLLFDGMEEKSSVSWNAM 409
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
I+GY+Q P +A+ LFR++ + +P +IA+++ L AC+Q A+ LG+ H Y + L
Sbjct: 410 ISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALL 469
Query: 242 NTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSR 301
V + + IDMYAKSG I ++ VF+ +KNK + +W +IA +HG G E++++F R
Sbjct: 470 MEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFER 529
Query: 302 MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAG 361
M + P+ TFI IL+ C H GLVE G +YFN M++ +GIEPK+E Y C++D+LGRAG
Sbjct: 530 MRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAG 589
Query: 362 YLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
L +A +L+ MP + ++ +W SLL+ +G++E+G+ + L++LEP N NY LSN
Sbjct: 590 RLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSN 649
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD-------FDR 474
+YA GRW++ ++R++++D+G++K GCS+IE+ +VH FVAGD P + +
Sbjct: 650 LYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRK 709
Query: 475 LYQILCKI 482
L + +CKI
Sbjct: 710 LEKKMCKI 717
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 182/397 (45%), Gaps = 44/397 (11%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL ++ + + +D S G+ A +F ++ + +NT I LC A L+
Sbjct: 164 GLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLF 223
Query: 65 NKIQASA-LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++Q + + + +L A +++S + +E+H ++ G
Sbjct: 224 REMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQ--------------- 268
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
+DEL V N VA YAK G L A +F M K V SW LI
Sbjct: 269 ----------YDEL--------VANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIG 310
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
G AQ P +A+ L+ +M + PD + + L A A L ++ G+ +H ++ ++GL
Sbjct: 311 GCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEI 370
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ +L+ +Y G+ A +F+ M+ KS ++W MI+G + +GL +AL +F ++
Sbjct: 371 DSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLV 430
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQ---YGC-MIDLLGR 359
+P++I +++L AC + LG+ Y ++ + + C ID+ +
Sbjct: 431 SDGFQPSDIAVVSVLGACSQQSALRLGKE-----THCYALKALLMEDVFVACSTIDMYAK 485
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+G ++E+ + + + A W +++AA ++GD E
Sbjct: 486 SGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGE 521
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 33/268 (12%)
Query: 59 NAVILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+A+ ++ K I + DN++FP V+KA LG IH + GL DV V AL
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY + A KVF + +R N+ WN++++G+++ G ++ F+++ E
Sbjct: 73 IAMYGKFGFVDAAVKVFHYMPVR--NLVSWNSIISGFSENG---FSKDCFDMLVE----- 122
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
++AG E + PD ++ L CA+ V++G IH
Sbjct: 123 ---MMAGE------------------EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAV 161
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ GL+ V +NN+L+DMY+K G + +A +F+ K+ ++W TMI GL G EA +
Sbjct: 162 KLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFN 221
Query: 298 MFSRME-RARVKPNEITFIAILSACCHV 324
+F M+ + ++ NE+T + IL AC +
Sbjct: 222 LFREMQMQEDIEVNEVTVLNILPACLEI 249
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 37/325 (11%)
Query: 23 LGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQAS--ALRPDNYSFP 80
GF D A +F + ++ +N+ I + + + ++ A L PD +
Sbjct: 79 FGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLV 138
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VL + +++G IH V GL DV V +L+ MY+ C + +A+ +FD+ + +
Sbjct: 139 TVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRK 198
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N WNTM+ G G +F EA LFR
Sbjct: 199 --NAVSWNTMIGGLCTKG------YIF-------------------------EAFNLFRE 225
Query: 201 MQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
MQ+ E+++ +E+ +L L AC ++ + + +H Y ++G + N + YAK G
Sbjct: 226 MQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCG 285
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A +VF +M+ K+V +W +I G A +G R+AL+++ +M + + P+ T ++L
Sbjct: 286 MLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLL 345
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIE 344
A H+ + G+ + R+G+E
Sbjct: 346 ASAHLKSLRYGKEVHGFVL-RHGLE 369
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 192 NEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNA 250
++AI +F ++ + D + AC LGE IH + + GL V + NA
Sbjct: 12 SDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNA 71
Query: 251 LIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR--VK 308
LI MY K G + A++VF M +++++W ++I+G + +G ++ DM M +
Sbjct: 72 LIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLL 131
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P+ T + +L C V++G R + + G+ + ++D+ + GYL EA+
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHG-LAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQM 190
Query: 369 LLRRMPFEANAAIWGSLLAA 388
L + NA W +++
Sbjct: 191 LFDKNN-RKNAVSWNTMIGG 209
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 272/493 (55%), Gaps = 47/493 (9%)
Query: 1 MIVRGLDQNNH-----LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTD 55
+I R L N H L++ I+ + A+ +F + +V + T I A +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A+ L + +RP+ Y++ VL++ +S + R +HC + GL+SDV V +
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRS 198
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI ++A K+G+ +A ++F+ M +
Sbjct: 199 ALIDVFA---------------------------------KLGEPEDALSVFDEMVTGDA 225
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
I W ++I G+AQ + + A+ LF+RM+ ++ + + L AC L +ELG H +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I +Y + I LNNAL+DMY K G + AL+VF MK + VITW+TMI+GLA +G +EA
Sbjct: 286 IVKYDQDLI--LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F RM+ + KPN IT + +L AC H GL+E G YF MK YGI+P E YGCMID
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLG+AG L +A KLL M E +A W +LL A + ++ L E A + +I L+P ++G
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF--- 472
Y +LSNIYA +W+ +IR MRD G+KK PGCS+IEV+K++H F+ GD SHP
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 473 -DRLYQILCKING 484
+L Q++ ++ G
Sbjct: 524 SKKLNQLIHRLTG 536
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
Q D P A+ +Q + D + C AV G I ++ G ++
Sbjct: 39 QRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L N LI+MY K + A Q+F+ M ++VI+WTTMI+ + + ++AL++ M R
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V+PN T+ ++L +C G+ ++ + I+K G+E + +ID+ + G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDA 213
Query: 367 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 397
+ M +A +W S++ A N DV L
Sbjct: 214 LSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVAL 245
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 272/493 (55%), Gaps = 47/493 (9%)
Query: 1 MIVRGLDQNNH-----LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTD 55
+I R L N H L++ I+ + A+ +F + +V + T I A +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A+ L + +RP+ Y++ VL++ +S + R +HC + GL+SDV V +
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRS 198
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI ++A K+G+ +A ++F+ M +
Sbjct: 199 ALIDVFA---------------------------------KLGEPEDALSVFDEMVTGDA 225
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
I W ++I G+AQ + + A+ LF+RM+ ++ + + L AC L +ELG H +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I +Y + I LNNAL+DMY K G + AL+VF MK + VITW+TMI+GLA +G +EA
Sbjct: 286 IVKYDQDLI--LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F RM+ + KPN IT + +L AC H GL+E G YF MK YGI+P E YGCMID
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLG+AG L +A KLL M E +A W +LL A + ++ L E A + +I L+P ++G
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF--- 472
Y +LSNIYA +W+ +IR MRD G+KK PGCS+IEV+K++H F+ GD SHP
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 473 -DRLYQILCKING 484
+L Q++ ++ G
Sbjct: 524 SKKLNQLIHRLTG 536
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
Q D P A+ +Q + D + C AV G I ++ G ++
Sbjct: 39 QRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L N LI+MY K + A Q+F+ M ++VI+WTTMI+ + + ++AL++ M R
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V+PN T+ ++L +C G+ ++ + I+K G+E + +ID+ + G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDA 213
Query: 367 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 397
+ M +A +W S++ A N DV L
Sbjct: 214 LSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVAL 245
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 282/493 (57%), Gaps = 39/493 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++ G DQ+ L ++ I+ S D A +F +Y+YN +AL +
Sbjct: 96 LLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEV 155
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVK----LSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ +Y ++ + + D +++ +VLKA V +S + GREIH + G D VH++
Sbjct: 156 LNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTT 215
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
L+ MY AK G ++NA +F M KNV+
Sbjct: 216 LVDMY---------------------------------AKFGCVSNASCVFNQMPVKNVV 242
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVE--NVKPDEIAMLAALSACAQLGAVELGEWIHN 234
SW+ +IA YA+ + EA+ LFR + +E ++ P+ + M++ L ACA L A+E G IH
Sbjct: 243 SWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHG 302
Query: 235 YIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGRE 294
YI + GL++I+P+ +AL+ MYA+ GK+ +VF+ M + V++W ++I+ +HG G++
Sbjct: 303 YILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKK 362
Query: 295 ALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMI 354
A+ +F M V+P+ I+F+++L AC H GLV+ G+ FN M +GI P +E Y CM+
Sbjct: 363 AIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMV 422
Query: 355 DLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
DLLGRA L+EA K++ M E +WGSLL + I+ +VEL E A L LEP N+G
Sbjct: 423 DLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAG 482
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDR 474
NY +L++IYA G W+ +++K++ G++K+PG S+IEV ++++ FV+ D +P ++
Sbjct: 483 NYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQ 542
Query: 475 LYQILCKINGQMK 487
L+ +L K++ ++K
Sbjct: 543 LHALLVKLSMELK 555
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
+C ++ + +H ++ + G + L LI+MY+ I A +VF+ +N+++
Sbjct: 79 SCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYV 138
Query: 279 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC----CHVGLVELGRR-Y 333
+ + L+L G G E L+M+ RM + + T+ +L AC C V L+ GR +
Sbjct: 139 YNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIH 198
Query: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+I+ R+G + + ++D+ + G + A + +MP + N W +++A
Sbjct: 199 AHIL--RHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVK-NVVSWSAMIA 249
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 264/467 (56%), Gaps = 42/467 (8%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
+YA SIF P + +NT I+ + A+ YN++ PDN+++P +LKA
Sbjct: 83 NYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKAC 142
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+L +I G++IH Q GL++DV V +LI MY
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMY------------------------- 177
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVE-N 205
+ G++ + A+FE + K SW+++++ A M +E + LFR M E N
Sbjct: 178 --------GRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETN 229
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN----NALIDMYAKSGKI 261
+K +E M++AL ACA GA+ LG IH ++ L I LN +L+DMY K G +
Sbjct: 230 LKAEESGMVSALLACANTGALNLGMSIHGFL----LRNISELNIIVQTSLVDMYVKCGCL 285
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
KAL +F+ M+ ++ +T++ MI+GLALHG G AL MFS+M + ++P+ + ++++L+AC
Sbjct: 286 DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNAC 345
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GLV+ GRR F M +EP E YGC++DLLGRAG L+EA + ++ +P E N I
Sbjct: 346 SHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI 405
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
W + L+ + ++ELG+ A Q L+KL HN G+Y ++SN+Y+ W++ + R +
Sbjct: 406 WRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAI 465
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
G+K+ PG S +E+ + H FV+ D SHP +Y++L ++ Q+KF
Sbjct: 466 KGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 512
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
+N A ++F + + + T+I GY + EA+ + M +PD L A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
C +L ++ G+ IH + + GL V + N+LI+MY + G++ + VFE +++K+ +W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 280 TTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 338
++M++ A G+ E L +F M +K E ++ L AC + G + LG +
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL- 260
Query: 339 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 398
R E I ++D+ + G L +A + ++M + N + ++++ ++G+ G
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGE---G 316
Query: 399 ECALQHLIKL 408
E AL+ K+
Sbjct: 317 ESALRMFSKM 326
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 270/464 (58%), Gaps = 3/464 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
+ S +S G + F + +V +N+ I Q + A L+ +++ D
Sbjct: 86 LLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGD 145
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ +L A + +E GR +HC + +G D+ + AL+ MY+ C + AR+ F+
Sbjct: 146 EFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFE 205
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
+ ++ +V W +M+ K G ++ AR F+ M E+N +SW T+I+ Y Q Q +EA+
Sbjct: 206 MMPIK--SVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEAL 263
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
L+++MQ PDE ++ LSAC ++G + +G+ +H YI N + L N+L+DMY
Sbjct: 264 DLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMY 323
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G++ A+++F M N++V++W +I GLA+HG +A+ F M R P+ ITF+
Sbjct: 324 AKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVR-NTSPDGITFV 382
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
A+LS+C H GL+E G+ YF M+ Y ++ ++E Y CM+DLLGR G+L++A L++ MP
Sbjct: 383 ALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPM 442
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+ + +WG+LL A I+G+V++G+ ++ L++LE + G + ++SN+ +W + ++
Sbjct: 443 KPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRL 502
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
RK+M++ G +K G S IE++ +HEF D H +Y ++
Sbjct: 503 RKLMKERGTRKDMGVSSIEINNSIHEFGVEDIRHESSSEIYAVV 546
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 167/386 (43%), Gaps = 66/386 (17%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
PD +YNT +A C +D P A+ L+ + + P+ ++ PFV+KA + + +
Sbjct: 8 PDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQAWDNALAV 67
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H + G V V AL+ YAS + D+R+ FDE++ R NV WN+M+ GYA+ G
Sbjct: 68 HGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGR--NVVSWNSMIGGYAQAG 125
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
D EA LF M+ + DE + + L
Sbjct: 126 D-------------------------------TREACALFGEMRRQGFLGDEFTLASLLL 154
Query: 219 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 278
AC+Q G +E G +H + G + L AL+DMY+K G + A + FE M KSV++
Sbjct: 155 ACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVS 214
Query: 279 WTTMIAGLALH-------------------------------GLGREALDMFSRMERARV 307
WT+M+ H G EALD++ +M+
Sbjct: 215 WTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGP 274
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
P+E T + +LSAC +G + +G+ ++ P I ++D+ + G + A
Sbjct: 275 APDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIH-NPDISLINSLLDMYAKCGQVDTAI 333
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYG 393
+L R M N W ++ ++G
Sbjct: 334 RLFREM-CNRNVVSWNVIIGGLAMHG 358
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 16/325 (4%)
Query: 166 LFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGA 225
+F+ + + + + + T+ Y D P EA+ L R M V P+E + + AC + A
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 226 VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ +H + G V + NAL+ YA +G +G + + F+ M ++V++W +MI G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
A G REA +F M R +E T ++L AC G +E GR +M G
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVS-GSPV 179
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ G ++D+ + G L A + MP ++ + W S+L A +G V+ C H+
Sbjct: 180 DLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVS-WTSMLCAQTKHGSVDAARCWFDHM 238
Query: 406 IKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG--------VKKMPGCSYI---E 454
+ N+ ++ + + Y G+++E+ + K M+ G V + C I
Sbjct: 239 PE---RNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLT 295
Query: 455 VSKRVHEFVAGDTSHPDFDRLYQIL 479
V K VH ++ + +PD + +L
Sbjct: 296 VGKMVHLYIRDNIHNPDISLINSLL 320
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 251/414 (60%), Gaps = 7/414 (1%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A L+ + + PD+++ VL +++I G+E H + GL S+ V AL++
Sbjct: 253 AYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVE 312
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT----EKNV 175
MY+ C+ I A+ FD +S R ++ WN +++GYA+ R L + M E NV
Sbjct: 313 MYSKCQDIVAAQMAFDGVSER--DLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNV 370
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+W +IAGY + Q + A+ LF MQ+ N++PD + L+AC++L ++ G+ +H Y
Sbjct: 371 YTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAY 430
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ G ++ V + AL+DMYAK G + +V+ + N ++++ M+ A+HG G E
Sbjct: 431 SIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEG 490
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F RM ++V+P+ +TF+A+LS+C H G +E+G +M + Y + P ++ Y CM+D
Sbjct: 491 IALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVA-YNVMPSLKHYTCMVD 549
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LL RAG L EA +L++ +P EA+A W +LL I+ +V+LGE A + LI+LEP+N GN
Sbjct: 550 LLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGN 609
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
Y +L+N+YA G+W+ + R++M+DMG++K PGCS+IE +H FVA D H
Sbjct: 610 YVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVAKDIYH 663
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 127/253 (50%), Gaps = 34/253 (13%)
Query: 38 KPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGRE 97
+P+VY +N I + +A+ L+ ++Q + LRPD Y+ +L A +L+TI+ G++
Sbjct: 367 EPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQ 426
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+H ++ G DSDVH+ AAL+ MYA C
Sbjct: 427 VHAYSIRAGHDSDVHIGAALVDMYAKC--------------------------------- 453
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
GD+ + ++ +++ N++S ++ YA E I LFRRM V+PD + LA L
Sbjct: 454 GDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVL 513
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-V 276
S+C G++E+G + Y + + ++D+ +++G++ +A ++ +N+ ++
Sbjct: 514 SSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADA 573
Query: 277 ITWTTMIAGLALH 289
+TW ++ G +H
Sbjct: 574 VTWNALLGGCFIH 586
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 182/401 (45%), Gaps = 66/401 (16%)
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+LY ++ +R D + FP VLK L +ELGR++H G L D + +A
Sbjct: 140 LLYEGVR---VRLDFFVFPVVLKICCGLCAVELGRQMH----GMALKHDGDMKSAF---- 188
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM----TEKNVIS 177
++F S + + A +N M+AGY + G+L A+ LF+ M +K+ IS
Sbjct: 189 ----------EMFSRFSRK--SAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRIS 236
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W ++I+GY +EA +LFR + E ++PD + + L+ CA + ++ G+ H+
Sbjct: 237 WNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAI 296
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLA---------- 287
GL + + AL++MY+K I A F+ + + + TW +I+G A
Sbjct: 297 VRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRE 356
Query: 288 LHGLGRE-------------------------ALDMFSRMERARVKPNEITFIAILSACC 322
LH R A+ +F+ M+ A ++P+ T IL+AC
Sbjct: 357 LHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACS 416
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
+ ++ G++ + R G + + ++D+ + G ++ ++ M N
Sbjct: 417 RLATIQRGKQ-VHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVY-NMISNPNLVSH 474
Query: 383 GSLLAASNIYGDVELGECALQHLI--KLEPHNSGNYAILSN 421
++L A ++G E G + ++ K+ P + A+LS+
Sbjct: 475 NAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSS 515
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 141/348 (40%), Gaps = 87/348 (25%)
Query: 94 LGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
LG+++H ++ +G ++ V L+QMYA C ++
Sbjct: 66 LGKQLHAHSIKSGFNAHEFVTTKLLQMYAR-NCSFE------------------------ 100
Query: 154 YAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP--DEI 211
NA +F+ M +N+ SWT L+ Y +M EA LF ++ E V+ D
Sbjct: 101 --------NACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFF 152
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLN-------------NALIDMYAKS 258
L C L AVELG +H ++ + NA+I Y ++
Sbjct: 153 VFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWEN 212
Query: 259 GKIGKALQVFENMKNKSV----ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITF 314
G + KA ++F+ M+ + V I+W +MI+G L EA +F + + ++P+ T
Sbjct: 213 GNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTL 272
Query: 315 IAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR--------------- 359
++L+ C + + G+ ++ R G++ G ++++ +
Sbjct: 273 GSVLAGCADMASIRRGKEAHSLAIVR-GLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVS 331
Query: 360 -----------AGYLQ--EAEKL------LRRMPFEANAAIWGSLLAA 388
+GY + +AEK+ +RR FE N W ++A
Sbjct: 332 ERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAG 379
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
I G D + H+ + +D + G + Y ++ S P++ +N + A + +
Sbjct: 432 IRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGI 491
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
L+ ++ AS +RPD+ +F VL + V ++E+G E V + + ++ +
Sbjct: 492 ALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLL 551
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAG 153
+ +Y+A ++ L + WN ++ G
Sbjct: 552 SRAGQLYEAYELIKNLPTEA-DAVTWNALLGG 582
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P + L +C G+ LG+ +H + + G N + L+ MYA++ A V
Sbjct: 49 PSSTTYASILDSC---GSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHV 105
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNEITFIAILSACCHVG 325
F+ M +++ +WT ++ G EA +F ++ E RV+ + F +L CC +
Sbjct: 106 FDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLC 165
Query: 326 LVELGRRYFNI-------MKSRYGIEPKIEQ-----YGCMIDLLGRAGYLQEAEKLLRRM 373
VELGR+ + MKS + + + + Y MI G L +A++L RM
Sbjct: 166 AVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRM 225
Query: 374 PFEA---NAAIWGSLLAA 388
E + W S+++
Sbjct: 226 EQEGVQKDRISWNSMISG 243
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 262/474 (55%), Gaps = 34/474 (7%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
D +F + DV YNT I Q+ +A+ + ++ + L+PD+++ VL
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ + G+EIH + G+DSDV++ ++L+ MYA
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA------------------------ 288
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV 206
K + ++ +F + ++ ISW +L+AGY Q + NEA+ LFR+M V
Sbjct: 289 ---------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 207 KPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQ 266
KP +A + + ACA L + LG+ +H Y+ + G + + + +AL+DMY+K G I A +
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+F+ M ++WT +I G ALHG G EA+ +F M+R VKPN++ F+A+L+AC HVGL
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
V+ YFN M YG+ ++E Y + DLLGRAG L+EA + +M E ++W +LL
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
++ +++ ++EL E + + ++ N G Y ++ N+YA GRW E K+R MR G++K
Sbjct: 520 SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
Query: 447 MPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 500
P CS+IE+ + H FV+GD SHP D++ + L + QM+ E + SGVL
Sbjct: 580 KPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME-KEGYVADTSGVL 632
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 187/366 (51%), Gaps = 9/366 (2%)
Query: 33 FTHKSKPDVYLYNTTIKALCQTDNPL--NAVILYNKIQASALRPDNYSFPFVLKAVVKLS 90
F P V + + I+ C TD L A+ + +++AS PD+ FP VLK+ +
Sbjct: 62 FKTLKSPPVLAWKSVIR--CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCI---YDARKVFDELSLRVWNVAVW 147
+ G +H V G+D D++ AL+ MYA + VFDE+ R N
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+ +++ R +FE+M K+V+S+ T+IAGYAQ +A+ + R M ++K
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
PD + + L ++ V G+ IH Y+ + G+++ V + ++L+DMYAKS +I + +V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
F + + I+W +++AG +G EAL +F +M A+VKP + F +++ AC H+ +
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
LG++ + R G I ++D+ + G ++ A K+ RM + W +++
Sbjct: 360 HLGKQLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIM 417
Query: 388 ASNIYG 393
++G
Sbjct: 418 GHALHG 423
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 140/291 (48%), Gaps = 35/291 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +G+D + ++ S +D + + + +F+ D +N+ + Q A
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ L+ ++ + ++P +F V+ A L+T+ LG+++H + G S++ + +AL+ M
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y+ C I ARK+FD ++ V + W ++ G+A G
Sbjct: 388 YSKCGNIKAARKIFDRMN--VLDEVSWTAIIMGHALHG---------------------- 423
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAV-ELGEWIHNYIEQY 239
+EA++LF M+ + VKP+++A +A L+AC+ +G V E + ++ + Y
Sbjct: 424 ---------HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENM-KNKSVITWTTMIAGLALH 289
GLN + A+ D+ ++GK+ +A M + W+T+++ ++H
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 272/468 (58%), Gaps = 7/468 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ +G + A F + V +N A Q + P A+ L++++ + PD+ ++
Sbjct: 203 AKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+ + + L I + + V AL+ M+A + AR +FDEL +
Sbjct: 263 VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQ 322
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N WN M++ Y +VG L+ AR LF+ M +++V+SW ++IAGYAQ + +I LF+
Sbjct: 323 R-NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKE 381
Query: 201 M-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M +++PDE+ + + LSAC +GA++L W+ + + + + + N+LI MY+K G
Sbjct: 382 MISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCG 441
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A ++F+ M + V+++ T+I+G A +G G+EA+ + ME ++P+ +T+I +L+
Sbjct: 442 SVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLT 501
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GL+ G+ F +++ P ++ Y CM+DLLGRAG L EA+ L++ MP + +A
Sbjct: 502 ACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHA 556
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
++GSLL AS I+ V LGE A L +LEP N GNY +LSNIYA GRW + ++R++M
Sbjct: 557 GVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMM 616
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ G+KK G S++E +VH+F GD SH +Y++L ++ +MK
Sbjct: 617 KKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 69/436 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL-GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++ L +N+ +S + +C+ L Y SIFT PD +Y+ +K +
Sbjct: 24 LVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHNQ 83
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V L+ + LRP PFV ++KL+ + G H + G D + A++
Sbjct: 84 VVSLFKCTHSLNLRPQ----PFVYIYLIKLAG-KSGNLFHAYVLKLGHIDDHFIRNAILD 138
Query: 120 MYASCKCIYDARKVFDELSLRV-----------W------------------NVAVWNTM 150
MYA + AR +F++++ R W N+ W +M
Sbjct: 139 MYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSM 198
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V GYAK+GDL +AR F+ M E++V+SW + + YAQ + P EA+ LF +M E + PD+
Sbjct: 199 VTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDD 258
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG----------- 259
+ +S+C+ +G L + I I+Q + + AL+DM+AK G
Sbjct: 259 TTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDE 318
Query: 260 ------------------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
++GK A ++F+NM + V++W +MIAG A +G ++++
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378
Query: 299 FSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F M ++P+E+T ++LSAC H+G ++L +I++ + I+ I + +I +
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK-NIKLGISGFNSLIFMY 437
Query: 358 GRAGYLQEAEKLLRRM 373
+ G + +A ++ + M
Sbjct: 438 SKCGSVADAHRIFQTM 453
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 272/468 (58%), Gaps = 7/468 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ +G + A F + V +N A Q + P A+ L++++ + PD+ ++
Sbjct: 203 AKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+ + + L I + + V AL+ M+A + AR +FDEL +
Sbjct: 263 VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQ 322
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
N WN M++ Y +VG L+ AR LF+ M +++V+SW ++IAGYAQ + +I LF+
Sbjct: 323 R-NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKE 381
Query: 201 M-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M +++PDE+ + + LSAC +GA++L W+ + + + + + N+LI MY+K G
Sbjct: 382 MISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCG 441
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
+ A ++F+ M + V+++ T+I+G A +G G+EA+ + ME ++P+ +T+I +L+
Sbjct: 442 SVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLT 501
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC H GL+ G+ F +++ P ++ Y CM+DLLGRAG L EA+ L++ MP + +A
Sbjct: 502 ACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHA 556
Query: 380 AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVM 439
++GSLL AS I+ V LGE A L +LEP N GNY +LSNIYA GRW + ++R++M
Sbjct: 557 GVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMM 616
Query: 440 RDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+ G+KK G S++E +VH+F GD SH +Y++L ++ +MK
Sbjct: 617 KKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 69/436 (15%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL-GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
++ L +N+ +S + +C+ L Y SIFT PD +Y+ +K +
Sbjct: 24 LVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHNQ 83
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V L+ + LRP PFV ++KL+ + G H + G D + A++
Sbjct: 84 VVSLFKCTHSLNLRPQ----PFVYIYLIKLAG-KSGNMFHAYVLKLGHIDDHFIRNAILD 138
Query: 120 MYASCKCIYDARKVFDELSLRV-----------W------------------NVAVWNTM 150
MYA + AR +F++++ R W N+ W +M
Sbjct: 139 MYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSM 198
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
V GYAK+GDL +AR F+ M E++V+SW + + YAQ + P EA+ LF +M E + PD+
Sbjct: 199 VTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDD 258
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG----------- 259
+ +S+C+ +G L + I I+Q + + AL+DM+AK G
Sbjct: 259 TTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDE 318
Query: 260 ------------------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
++GK A ++F+NM + V++W +MIAG A +G ++++
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378
Query: 299 FSRMERA-RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F M ++P+E+T ++LSAC H+G ++L +I++ + I+ I + +I +
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK-NIKLGISGFNSLIFMY 437
Query: 358 GRAGYLQEAEKLLRRM 373
+ G + +A ++ + M
Sbjct: 438 SKCGSVADAHRIFQTM 453
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 268/464 (57%), Gaps = 6/464 (1%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE--LGREIHCQ 101
+ + I L + A ++ ++ + + P++ +F +L +S+ LG +H
Sbjct: 33 WTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEALGDLLHGY 92
Query: 102 TVGTGLD-SDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
GLD + V V A++ MY+ AR VFD + + N WNTM+ GY + G +
Sbjct: 93 ACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDK--NSVTWNTMIDGYMRSGQV 150
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
NNA LF+ M E+++ISWT +I G+ + EA+ FR MQ+ VKPD +A++AAL+AC
Sbjct: 151 NNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAAC 210
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
LGA+ G W+H Y+ + ++N+LID+Y + G + A +VF+ M+ ++V++W
Sbjct: 211 THLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWN 270
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
++I G A +G E+L F +M+ KP+ +TF L+AC HVGLVE G RYF MK
Sbjct: 271 SVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRD 330
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGE 399
+ I P+IE YGC++DL RAG L++A +++ MP + N + GSLLAA +G + L E
Sbjct: 331 HRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAE 390
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
++HL L + NY ILSN+YA G W + K+R+ M+ +G+KK PG S +E+
Sbjct: 391 RLVKHLSDLNVKSHSNYVILSNMYAADGIWEGASKMRRKMKGLGLKKQPGFSSVEIDDCT 450
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
H F+AGD++H + + ++L I+ ++ + +G L +D
Sbjct: 451 HVFMAGDSAHVETAYIREVLELISSDLRLQGCVFETLAGDLFND 494
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 42/255 (16%)
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 228
T + +SWT+ I ++ + EA F M++ V+P+ I +A LS C + G+ L
Sbjct: 26 TSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEAL 85
Query: 229 GEWIHNYIEQYGLN-TIVPLNNALIDMYAKSGKIGKALQVFENMKNKS------------ 275
G+ +H Y + GL+ T V + A++ MY+K G+ GKA VF+ M++K+
Sbjct: 86 GDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYM 145
Query: 276 -------------------VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
+I+WT MI G G EAL F M+ + VKP+ + IA
Sbjct: 146 RSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 205
Query: 317 ILSACCHVGLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
L+AC H+G + G RY +M + + I +IDL R G ++ A ++ +M
Sbjct: 206 ALAACTHLGALSFGLWVHRY--VMNQDF--KNNIRVSNSLIDLYCRCGCVEFAREVFDKM 261
Query: 374 PFEANAAIWGSLLAA 388
+ W S++
Sbjct: 262 E-KRTVVSWNSVIVG 275
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D+N+ + ID G + A +F + D+ + I + A+ + +
Sbjct: 131 DKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFRE 190
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S ++PD + L A L + G +H + +++ V +LI +Y C C
Sbjct: 191 MQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGC 250
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VFD++ R V WN+++ G+A G+
Sbjct: 251 VEFAREVFDKMEKRT--VVSWNSVIVGFAANGN--------------------------- 281
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIV 245
+E++ FR+MQ E KPD + AL+AC+ +G VE G + + ++ +
Sbjct: 282 ----AHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRI 337
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
L+D+Y+++G++ AL V ++M K + + +++A HG
Sbjct: 338 EHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRNHG 383
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 35/163 (21%)
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
KS +I + L++ ++ +++ ++WT+ I L+ +G EA FS M A V+PN ITFIA
Sbjct: 12 KSSQIQRILKLNQS-TSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIA 70
Query: 317 ILSAC------------------CHVGL----VELGRRYFNIM--KSRYG--------IE 344
+LS C C +GL V +G + + R+G +E
Sbjct: 71 LLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFME 130
Query: 345 PKIE-QYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
K + MID R+G + A KL MP E + W +++
Sbjct: 131 DKNSVTWNTMIDGYMRSGQVNNAVKLFDEMP-ERDLISWTAMI 172
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 264/476 (55%), Gaps = 43/476 (9%)
Query: 12 LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQT-DNPLNAV-ILYNKIQA 69
L SR + S + F DYA +F P+ +++NT I A ++ D A+ I Y ++
Sbjct: 61 LYSRILHVSSLIDF-DYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEE 119
Query: 70 SALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYD 129
++ PD ++FPF+LKA + + GR+ H Q GLD DV+V +LI +Y
Sbjct: 120 GSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLY-------- 171
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
A G L+ A +FE M ++++SW +I Y Q
Sbjct: 172 -------------------------ASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSG 206
Query: 190 QPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI---VP 246
A+ LF MQ + +PD M + +SACA +GA+ LG W H Y+ + + V
Sbjct: 207 LFENALKLFVEMQ-NSFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVL 265
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERA 305
+N++L+DMY+K G + A QVFE M + +W +MI LA+HG G+ AL FSR+ E
Sbjct: 266 INSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEME 325
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ PN +TF+ +LSAC H G+V GR+YF++M + Y IEP++E YGC++DLL R+G++ E
Sbjct: 326 KFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDE 385
Query: 366 AEKLLRRMPFEANAAIWGSLL-AASNIYGDVELG-ECALQHLIKLEPHNSGNYAILSNIY 423
A +L+ M + +A IW SLL A VEL E A + L + +SG Y +LS +Y
Sbjct: 386 ALELVANMHIKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVY 445
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
A +WN+ G IRKVM DMGV K PGCS IE+ HEF AGDTSHP +Y ++
Sbjct: 446 ASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGISHEFFAGDTSHPRIKEIYGVI 501
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 255/460 (55%), Gaps = 3/460 (0%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A IF + + ++ I CQ+ P ++ L+ ++ +P+ F +L A+
Sbjct: 269 ARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALAS 328
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+ ++ G IH G + DV V ++LI MY C D R +FD + + N+ WN
Sbjct: 329 VEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEK--NMVSWN 386
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
MV GY+ G + A+ LF +M +N +SW+ +IAG+ +Q +E +F M + P
Sbjct: 387 AMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIP 446
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
++ + L ACA +++ G+ +H I + G+ + AL DMYAKSG I + +VF
Sbjct: 447 NKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVF 506
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAILSACCHVGLV 327
M K+ ++WT MI GLA GL E+L +F ME+ + + PNE+ F+A+L AC H GLV
Sbjct: 507 NRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLV 566
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G YFN M++ YG++PK + C++D+L RAG L EAE+ + MPF+ W +LL+
Sbjct: 567 DKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLS 626
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
Y + EL E L ++ N Y +LSNIYA GRW + K+RK+M+ G+KK
Sbjct: 627 GCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKS 686
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
GCS++E+ RVH F + D +H +Y+IL + +MK
Sbjct: 687 GGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 35/378 (9%)
Query: 40 DVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH 99
+V + I Q + A+ L+ K+ S ++P+ +F V++A L LG +
Sbjct: 148 NVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVL 207
Query: 100 CQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGD 159
V TG + D+ V +LI + I+ AR+VFD + + +V W ++ Y ++ +
Sbjct: 208 GLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEK--DVVSWTAILDLYVEMDE 265
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L AR +F+ M ++N +SW+ +IA Y Q P E++ LF RM E KP+ + LSA
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSA 325
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
A + A++ G IH ++ + G V ++++LIDMY K G+ +F+ + K++++W
Sbjct: 326 LASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSW 385
Query: 280 TTMIAGLALHGLGREALDMFSRME-RARVK------------------------------ 308
M+ G +L+G EA +F+ M R V
Sbjct: 386 NAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEI 445
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
PN+ TF ++L AC ++ G+ + + GI+ + D+ ++G ++ ++K
Sbjct: 446 PNKSTFSSLLCACASTASLDKGKNLHGKI-VKLGIQCDTYVGTALTDMYAKSGDIESSKK 504
Query: 369 LLRRMPFEANAAIWGSLL 386
+ RMP + N W +++
Sbjct: 505 VFNRMP-KKNEVSWTAMI 521
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 162/377 (42%), Gaps = 66/377 (17%)
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK---------------- 125
+LK + I G +H TG+ S+ ++ L+ MY + +
Sbjct: 27 LLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFD 86
Query: 126 -----CIY----------DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELM 170
C+ +ARK+FDE+ N W +++G+ K G + + FE
Sbjct: 87 LVVHNCMISANVQRGNLDEARKLFDEMPQT--NEISWTALISGFMKYGRVRESMWYFERN 144
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGE 230
+NV+SWT I+GY Q EA+ LF ++ VKP+++ + + ACA LG LG
Sbjct: 145 PFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGM 204
Query: 231 WIHNYIEQYGLNTIVPLNNALI-------------------------------DMYAKSG 259
+ I + G + ++N+LI D+Y +
Sbjct: 205 SVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMD 264
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
++G+A ++F+ M ++ ++W+ MIA G E+L +F RM + KPN F +ILS
Sbjct: 265 ELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILS 324
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
A V ++ G + ++ G E + +ID+ + G ++ L + E N
Sbjct: 325 ALASVEALQAGMNIHGHV-TKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTI-LEKNM 382
Query: 380 AIWGSLLAASNIYGDVE 396
W +++ ++ G +E
Sbjct: 383 VSWNAMVGGYSLNGHME 399
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 232/354 (65%), Gaps = 6/354 (1%)
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM- 201
N V ++ YAK GDL++AR LF M +NV++W ++IAGYAQ Q AI LF+ M
Sbjct: 294 NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMI 353
Query: 202 QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKI 261
+ + PDE+ M++ +SAC LGA+ELG W+ ++ + + + +NA+I MY++ G +
Sbjct: 354 TAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSM 413
Query: 262 GKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC 321
A +VF+ M + V+++ T+I+G A HG G EA+++ S M+ ++P+ +TFI +L+AC
Sbjct: 414 EDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTAC 473
Query: 322 CHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
H GL+E GR+ F +K +P I+ Y CM+DLLGR G L++A++ + RMP E +A +
Sbjct: 474 SHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGV 528
Query: 382 WGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRD 441
+GSLL AS I+ VELGE A L +LEP NSGN+ +LSNIYA GRW + +IR+ M+
Sbjct: 529 YGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKK 588
Query: 442 MGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNE 495
GVKK G S++E ++H+F+ D SH D +YQ+L ++ +M+ A ++ ++
Sbjct: 589 GGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 642
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 203/406 (50%), Gaps = 39/406 (9%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSL-GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I L +N+ ++ I+ C+ L Y + +F P+V+++ + ++ +
Sbjct: 24 IIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAK 83
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V++Y ++Q +RPD + +P ++K+ T +G H +G G SD V A+I
Sbjct: 84 VVLMYEQMQGCGVRPDAFVYPILIKSA---GTGGIGFHAHVLKLGHG--SDAFVRNAVID 138
Query: 120 MYASCKCIYDARKVFDEL-----SLRVWN--------------------------VAVWN 148
MYA I ARKVFDE+ + WN V W
Sbjct: 139 MYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWT 198
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
MV GYAKV DL AR F+ M E++V+SW +++GYAQ EA+ LF M ++P
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEP 258
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
DE + +SAC+ G L + + Q + + AL+DMYAK G + A ++F
Sbjct: 259 DETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLF 318
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEITFIAILSACCHVGLV 327
M ++V+TW +MIAG A +G A+++F M A ++ P+E+T ++++SAC H+G +
Sbjct: 319 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 378
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
ELG + I+ I + MI + R G +++A+++ + M
Sbjct: 379 ELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 423
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 14/177 (7%)
Query: 2 IVRGLDQNNHLLS-----RFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDN 56
+VR L +N LS I S G + A +F + DV YNT I +
Sbjct: 384 VVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGH 443
Query: 57 PLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ A+ L + ++ + PD +F VL A +E GR++ +D A
Sbjct: 444 GVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDH----YAC 499
Query: 117 LIQMYASCKCIYDARKVFDELSLR----VWNVAVWNTMVAGYAKVGDLNNARALFEL 169
++ + + DA++ + + + V+ + + + ++G+L A LFEL
Sbjct: 500 MVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGEL-AANKLFEL 555
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,514,718,911
Number of Sequences: 23463169
Number of extensions: 296028805
Number of successful extensions: 853982
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9111
Number of HSP's successfully gapped in prelim test: 2759
Number of HSP's that attempted gapping in prelim test: 679400
Number of HSP's gapped (non-prelim): 59647
length of query: 507
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 360
effective length of database: 8,910,109,524
effective search space: 3207639428640
effective search space used: 3207639428640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)