BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010575
(507 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 568 bits (1464), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/492 (55%), Positives = 378/492 (76%), Gaps = 7/492 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN- 59
MI+ GL+++N +++FI++CS+ G YAYS+FTH+ P+ YL+NT I+AL D P
Sbjct: 38 MIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAH 97
Query: 60 --AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ +Y K+ A +PD ++FPFVLK V++S + GR+IH Q V G DS VHVV L
Sbjct: 98 SIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGL 157
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT--EKNV 175
IQMY SC + DARK+FDE+ ++ +V VWN ++AGY KVG+++ AR+L E+M +N
Sbjct: 158 IQMYFSCGGLGDARKMFDEMLVK--DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNE 215
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT +I+GYA+ + +EAI +F+RM +ENV+PDE+ +LA LSACA LG++ELGE I +Y
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ G+N V LNNA+IDMYAKSG I KAL VFE + ++V+TWTT+IAGLA HG G EA
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEA 335
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L MF+RM +A V+PN++TFIAILSAC HVG V+LG+R FN M+S+YGI P IE YGCMID
Sbjct: 336 LAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID 395
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EA+++++ MPF+ANAAIWGSLLAASN++ D+ELGE AL LIKLEP+NSGN
Sbjct: 396 LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGN 455
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L+N+Y+ LGRW+ES +R +M+ +GVKKM G S IEV RV++F++GD +HP +R+
Sbjct: 456 YMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERI 515
Query: 476 YQILCKINGQMK 487
++IL +++ Q++
Sbjct: 516 HEILQEMDLQIQ 527
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 156/378 (41%), Gaps = 73/378 (19%)
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
FV + + ++ ++ HC + TGL+ D VA I+ +C
Sbjct: 17 FVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIE---AC---------------- 57
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE---AITL 197
+ G L A ++F N T+I + +D+PN AIT+
Sbjct: 58 --------------SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITV 103
Query: 198 FRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAK 257
+R++ KPD L ++ V G IH + +G ++ V + LI MY
Sbjct: 104 YRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFS 163
Query: 258 SGKIGKALQVFENMKNKSV---------------------------------ITWTTMIA 284
G +G A ++F+ M K V ++WT +I+
Sbjct: 164 CGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVIS 223
Query: 285 GLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIE 344
G A G EA+++F RM V+P+E+T +A+LSAC +G +ELG R + + R G+
Sbjct: 224 GYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMN 282
Query: 345 PKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQH 404
+ +ID+ ++G + +A + + E N W +++A +G
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNR 341
Query: 405 LIK--LEPHNSGNYAILS 420
++K + P++ AILS
Sbjct: 342 MVKAGVRPNDVTFIAILS 359
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 311/471 (66%), Gaps = 3/471 (0%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ GL Q++ ++++ +D C + DYA +F S P+V+LYN+ I+A +
Sbjct: 33 IIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDV 92
Query: 61 VILYNKIQASALR-PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +Y ++ + PD ++FPF+ K+ L + LG+++H G V ALI
Sbjct: 93 IRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALID 152
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY + DA KVFDE+ R +V WN++++GYA++G + A+ LF LM +K ++SWT
Sbjct: 153 MYMKFDDLVDAHKVFDEMYER--DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWT 210
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I+GY + EA+ FR MQ+ ++PDEI++++ L +CAQLG++ELG+WIH Y E+
Sbjct: 211 AMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR 270
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
G + NALI+MY+K G I +A+Q+F M+ K VI+W+TMI+G A HG A++ F
Sbjct: 271 GFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETF 330
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
+ M+RA+VKPN ITF+ +LSAC HVG+ + G RYF++M+ Y IEPKIE YGC+ID+L R
Sbjct: 331 NEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG L+ A ++ + MP + ++ IWGSLL++ G++++ A+ HL++LEP + GNY +L
Sbjct: 391 AGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLL 450
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+NIYA LG+W + ++RK++R+ +KK PG S IEV+ V EFV+GD S P
Sbjct: 451 ANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/478 (42%), Positives = 305/478 (63%), Gaps = 5/478 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
M+ GL Q+++ +++F+ C S SD YA +F +PD +L+N I+ +D P
Sbjct: 37 MLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEP 96
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
+++LY ++ S+ + Y+FP +LKA LS E +IH Q G ++DV+ V +L
Sbjct: 97 ERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSL 156
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I YA A +FD + + WN+++ GY K G ++ A LF M EKN IS
Sbjct: 157 INSYAVTGNFKLAHLLFDRIPEP--DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS 214
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
WTT+I+GY Q D EA+ LF MQ +V+PD +++ ALSACAQLGA+E G+WIH+Y+
Sbjct: 215 WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN 274
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ + L LIDMYAK G++ +AL+VF+N+K KSV WT +I+G A HG GREA+
Sbjct: 275 KTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAIS 334
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLL 357
F M++ +KPN ITF A+L+AC + GLVE G+ F M+ Y ++P IE YGC++DLL
Sbjct: 335 KFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLL 394
Query: 358 GRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYA 417
GRAG L EA++ ++ MP + NA IWG+LL A I+ ++ELGE + LI ++P++ G Y
Sbjct: 395 GRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYV 454
Query: 418 ILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+NI+A+ +W+++ + R++M++ GV K+PGCS I + HEF+AGD SHP+ +++
Sbjct: 455 HKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/493 (39%), Positives = 309/493 (62%), Gaps = 6/493 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+ V G +++HL+ F+ + S + DYA I KP ++ N+ I+A C++ P
Sbjct: 29 LYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPE 88
Query: 59 NAVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
+ Y +I +S L+PDNY+ F+++A L E G ++H T+ G D+D HV
Sbjct: 89 KSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTG 148
Query: 117 LIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVI 176
LI +YA C+ KVF+ S+ + MV A+ GD+ AR LFE M E++ I
Sbjct: 149 LISLYAELGCLDSCHKVFN--SIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+W +I+GYAQ+ + EA+ +F MQ+E VK + +AM++ LSAC QLGA++ G W H+YI
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
E+ + V L L+D+YAK G + KA++VF M+ K+V TW++ + GLA++G G + L
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FS M++ V PN +TF+++L C VG V+ G+R+F+ M++ +GIEP++E YGC++DL
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
RAG L++A ++++MP + +AA+W SLL AS +Y ++ELG A + +++LE N G Y
Sbjct: 387 YARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAY 446
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+LSNIYA W+ +R+ M+ GV+K PGCS +EV+ VHEF GD SHP + ++
Sbjct: 447 VLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQID 506
Query: 477 QILCKINGQMKFA 489
+ I+ +++ A
Sbjct: 507 AVWKDISRRLRLA 519
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/485 (39%), Positives = 305/485 (62%), Gaps = 6/485 (1%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
DQ+ ++ I CS+L DYAY +F++ S P+VYLY I + + V LY++
Sbjct: 58 DQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+ +++ PDNY V+ +V+K +++ REIH Q + G S V ++++Y
Sbjct: 118 MIHNSVLPDNY----VITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ +A+K+FDE+ R A M+ Y++ G + A LF+ + K+ + WT +I G
Sbjct: 174 LVNAKKMFDEMPDRDHVAAT--VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLV 231
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
+ + N+A+ LFR MQ+ENV +E + LSAC+ LGA+ELG W+H+++E +
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 291
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ NALI+MY++ G I +A +VF M++K VI++ TMI+GLA+HG EA++ F M
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
+PN++T +A+L+AC H GL+++G FN MK + +EP+IE YGC++DLLGR G L+EA
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ + +P E + + G+LL+A I+G++ELGE + L + E +SG Y +LSN+YA
Sbjct: 412 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
G+W ES +IR+ MRD G++K PGCS IEV ++HEF+ GD +HP + +YQ L ++N +
Sbjct: 472 GKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRIL 531
Query: 487 KFAEH 491
+F E+
Sbjct: 532 RFKEN 536
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/482 (39%), Positives = 301/482 (62%), Gaps = 2/482 (0%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L+ +H+ + I +S G + A +F D+ +N I + A+ +Y
Sbjct: 187 LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ ++PD+ + ++ + L + G+E + GL + +V AL+ M++ C
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
I++AR++FD L R + W TM++GYA+ G L+ +R LF+ M EK+V+ W +I G
Sbjct: 307 DIHEARRIFDNLEKRT--IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
Q + +A+ LF+ MQ N KPDEI M+ LSAC+QLGA+++G WIH YIE+Y L+ V
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERA 305
L +L+DMYAK G I +AL VF ++ ++ +T+T +I GLALHG A+ F+ M A
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ P+EITFI +LSACCH G+++ GR YF+ MKSR+ + P+++ Y M+DLLGRAG L+E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 366 AEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAI 425
A++L+ MP EA+AA+WG+LL ++G+VELGE A + L++L+P +SG Y +L +Y
Sbjct: 545 ADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGE 604
Query: 426 LGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQ 485
W ++ + R++M + GV+K+PGCS IEV+ V EF+ D S P+ +++Y L +
Sbjct: 605 ANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRH 664
Query: 486 MK 487
M+
Sbjct: 665 MR 666
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 211/433 (48%), Gaps = 77/433 (17%)
Query: 1 MIVRGLDQNNHLLSRFIDSC--SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
MI+ GL + SR I C S + DY+ I P+++ +N TI+ +++NP
Sbjct: 76 MIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPK 135
Query: 59 NAVILYNKIQASAL---RPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
+ +LY ++ RPD++++P + K L LG I + L+ HV
Sbjct: 136 ESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHN 195
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
A I M+ASC + +ARKVFDE +R ++ WN ++ GY K+G
Sbjct: 196 ASIHMFASCGDMENARKVFDESPVR--DLVSWNCLINGYKKIG----------------- 236
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+ +AI +++ M+ E VKPD++ M+ +S+C+ LG + G+ + Y
Sbjct: 237 --------------EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL---- 291
+++ GL +PL NAL+DM++K G I +A ++F+N++ +++++WTTMI+G A GL
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 292 ---------------------------GREALDMFSRMERARVKPNEITFIAILSACCHV 324
G++AL +F M+ + KP+EIT I LSAC +
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 325 GLVELG---RRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAI 381
G +++G RY +Y + + ++D+ + G + EA + + N+
Sbjct: 403 GALDVGIWIHRYI----EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLT 457
Query: 382 WGSLLAASNIYGD 394
+ +++ ++GD
Sbjct: 458 YTAIIGGLALHGD 470
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 300/481 (62%), Gaps = 4/481 (0%)
Query: 22 SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPF 81
S G D A +FT + DV +N+ I Q +P A+ L+ K+++ ++ + +
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 82 VLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
VL A K+ +E GR++ ++ ++ + A++ MY C I DA+++FD + +
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK- 296
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM 201
+ W TM+ GYA D AR + M +K++++W LI+ Y Q +PNEA+ +F +
Sbjct: 297 -DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 202 QVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
Q++ N+K ++I +++ LSACAQ+GA+ELG WIH+YI+++G+ + +ALI MY+K G
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
+ K+ +VF +++ + V W+ MI GLA+HG G EA+DMF +M+ A VKPN +TF + A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C H GLV+ F+ M+S YGI P+ + Y C++D+LGR+GYL++A K + MP + +
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
+WG+LL A I+ ++ L E A L++LEP N G + +LSNIYA LG+W ++RK MR
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595
Query: 441 DMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVL 500
G+KK PGCS IE+ +HEF++GD +HP +++Y L ++ ++K + + E S VL
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK-SNGYEPEISQVL 654
Query: 501 E 501
+
Sbjct: 655 Q 655
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 218/437 (49%), Gaps = 72/437 (16%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY-NKIQASALRPDNYSF 79
SS +YA +F KP+ + +NT I+A +P+ ++ + + + S P+ Y+F
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 80 PFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSL 139
PF++KA ++S++ LG+ +H V + + SDV V +LI Y SC
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC--------------- 179
Query: 140 RVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFR 199
GDL++A +F + EK+V+SW ++I G+ Q P++A+ LF+
Sbjct: 180 ------------------GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 200 RMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+M+ E+VK + M+ LSACA++ +E G + +YIE+ +N + L NA++DMY K G
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLAL------------------------------- 288
I A ++F+ M+ K +TWTTM+ G A+
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 289 HGLGREALDMFSRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G EAL +F ++ + +K N+IT ++ LSAC VG +ELGR + +K ++GI
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNF 400
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIK 407
+I + + G L+++ ++ + + + +W +++ ++G G A+ K
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEAVDMFYK 456
Query: 408 LEPHN-SGNYAILSNIY 423
++ N N +N++
Sbjct: 457 MQEANVKPNGVTFTNVF 473
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 151 VAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPD 209
+A + L AR +F+ + + N +W TLI YA P +I F M E+ P+
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269
+ + A A++ ++ LG+ +H + + + V + N+LI Y G + A +VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329
+K K V++W +MI G G +AL++F +ME VK + +T + +LSAC + +E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 330 GRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR+ + I ++R + + M+D+ + G +++A++L M E + W ++L
Sbjct: 251 GRQVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG 307
Query: 389 SNIYGDVE 396
I D E
Sbjct: 308 YAISEDYE 315
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 7/211 (3%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63
G+ N H+ S I S G + + +F K DV++++ I L AV +
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI-HCQTVGTGLDSDVHVVAALIQMYA 122
+ K+Q + ++P+ +F V A ++ + H G+ + A ++ +
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
Query: 123 SCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARA----LFELMTEKNVISW 178
+ A K + + + + +VW ++ +LN A L EL +N +
Sbjct: 514 RSGYLEKAVKFIEAMPIPP-STSVWGALLGACKIHANLNLAEMACTRLLEL-EPRNDGAH 571
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPD 209
L YA++ + L + M+V +K +
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/478 (38%), Positives = 293/478 (61%), Gaps = 15/478 (3%)
Query: 27 DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP---LNAVILYNKIQASALRPDNYSFPFVL 83
DYA+ IF + + + +NT I+ ++D + + Y + + P+ ++FP VL
Sbjct: 76 DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF--------- 134
KA K I+ G++IH + G D V++ L++MY C + DAR +F
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 135 ---DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQP 191
+ R + +WN M+ GY ++GD AR LF+ M +++V+SW T+I+GY+
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+A+ +FR M+ +++P+ + +++ L A ++LG++ELGEW+H Y E G+ L +AL
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 252 IDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNE 311
IDMY+K G I KA+ VFE + ++VITW+ MI G A+HG +A+D F +M +A V+P++
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+ +I +L+AC H GLVE GRRYF+ M S G+EP+IE YGCM+DLLGR+G L EAE+ +
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 372 RMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNE 431
MP + + IW +LL A + G+VE+G+ L+ + PH+SG Y LSN+YA G W+E
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 432 SGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFA 489
++R M++ ++K PGCS I++ +HEFV D SHP + +L +I+ +++ A
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 50/283 (17%)
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNE--AITLFRRMQV-ENVKPDEIAMLA 215
DL+ A +F M ++N SW T+I G+++ D+ AITLF M E V+P+ +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGL-----------------------------NTI-- 244
L ACA+ G ++ G+ IH +YG N I
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 245 --------------VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
+ L N +ID Y + G A +F+ M+ +SV++W TMI+G +L+G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
++A+++F M++ ++PN +T +++L A +G +ELG + ++ GI
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLG 312
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ID+ + G +++A + R+P E N W +++ I+G
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHG 354
Score = 39.3 bits (90), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 87/209 (41%), Gaps = 5/209 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+ ++ L S ID S G + A +F + +V ++ I +A+ +
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 363
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGT-GLDSDVHVVAALIQMYAS 123
K++ + +RP + ++ +L A +E GR Q V GL+ + ++ +
Sbjct: 364 CKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFEL---MTEKNVISWTT 180
+ +A + + ++ +V +W ++ G++ + + + M + ++
Sbjct: 424 SGLLDEAEEFILNMPIKPDDV-IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVA 482
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPD 209
L YA +E + RM+ ++++ D
Sbjct: 483 LSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 296/500 (59%), Gaps = 35/500 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
I G+D +++ + I C+ + SD YA + +PD +++NT ++ ++D P
Sbjct: 28 FIKYGVDTDSYFTGKLILHCA-ISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEP 86
Query: 58 LNAVILY-NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAA 116
N+V ++ ++ + PD++SF FV+KAV ++ G ++HCQ + GL+S + V
Sbjct: 87 HNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTT 146
Query: 117 LIQMYASCKCIYDARKVFDEL---SLRVWNVAV--------------------------W 147
LI MY C C+ ARKVFDE+ +L WN + W
Sbjct: 147 LIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSW 206
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
N M+AGY K G+L +A+ +F M ++ +SW+T+I G A NE+ FR +Q +
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+E+++ LSAC+Q G+ E G+ +H ++E+ G + IV +NNALIDMY++ G + A V
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 268 FENMKNKS-VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
FE M+ K +++WT+MIAGLA+HG G EA+ +F+ M V P+ I+FI++L AC H GL
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+E G YF+ MK Y IEP+IE YGCM+DL GR+G LQ+A + +MP A +W +LL
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
A + +G++EL E Q L +L+P+NSG+ +LSN YA G+W + IRK M +KK
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Query: 447 MPGCSYIEVSKRVHEFVAGD 466
S +EV K +++F AG+
Sbjct: 507 TTAWSLVEVGKTMYKFTAGE 526
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/481 (40%), Positives = 295/481 (61%), Gaps = 19/481 (3%)
Query: 28 YAYSIFTHKS-KPDVYLYNTTIKALC------QTDNPLNAVILYNKIQASALRPDNYSFP 80
YA IF + K + +L+N I+A+ Q +P++ +Y +++ + PD ++FP
Sbjct: 10 YANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPIS---VYLRMRNHRVSPDFHTFP 66
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
F+L + + LG+ H Q + GLD D V +L+ MY+SC + A++VFD+ +
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN++V YAK G +++AR LF+ M E+NVISW+ LI GY + EA+ LFR
Sbjct: 127 --DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 201 MQVEN-----VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
MQ+ V+P+E M LSAC +LGA+E G+W+H YI++Y + + L ALIDMY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 256 AKSGKIGKALQVFENM-KNKSVITWTTMIAGLALHGLGREALDMFSRMERA-RVKPNEIT 313
AK G + +A +VF + K V ++ MI LA++GL E +FS M + + PN +T
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ IL AC H GL+ G+ YF +M +GI P I+ YGCM+DL GR+G ++EAE + M
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
P E + IWGSLL+ S + GD++ E AL+ LI+L+P NSG Y +LSN+YA GRW E
Sbjct: 365 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 424
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
IR M G+ K+PGCSY+EV VHEFV GD S + +R+Y +L +I +++ A ++
Sbjct: 425 CIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVT 484
Query: 494 N 494
+
Sbjct: 485 D 485
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 292/479 (60%), Gaps = 2/479 (0%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
F+D +S G +YA ++F S DV +NT I+ C+ A L+ +++ S + PD
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
++ A + + R I+ + + D H++ AL+ MYA C+ AR+ F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
++S+R N+ V MV+GY+K G L++A+ +F+ +K+++ WTT+I+ Y + D P EA+
Sbjct: 272 KMSVR--NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
+F M +KPD ++M + +SACA LG ++ +W+H+ I GL + + +NNALI+MY
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + VFE M ++V++W++MI L++HG +AL +F+RM++ V+PNE+TF+
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L C H GLVE G++ F M Y I PK+E YGCM+DL GRA L+EA +++ MP
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
+N IWGSL++A I+G++ELG+ A + +++LEP + G ++SNIYA RW + I
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
R+VM + V K G S I+ + + HEF+ GD H + +Y L ++ ++K A ++ +
Sbjct: 570 RRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 189/375 (50%), Gaps = 19/375 (5%)
Query: 28 YAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAV 86
YA ++F+ S P+ ++N ++ L ++ P ++ Y +I+ R D +SF +LKAV
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
K+S + G E+H D V + MYASC I AR VFDE+S R +V
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR--DVVT 179
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLI------AGYAQMDQPNEAITLFRR 200
WNTM+ Y + G ++ A LFE M + NV+ ++ G + N AI F
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF-- 237
Query: 201 MQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+EN V+ D + A ++ A G +++ + + + + ++ A++ Y+K G
Sbjct: 238 -LIENDVRMDTHLLTALVTMYAGAGCMDMA---REFFRKMSVRNLF-VSTAMVSGYSKCG 292
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILS 319
++ A +F+ + K ++ WTTMI+ +EAL +F M + +KP+ ++ +++S
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANA 379
AC ++G+++ + + + G+E ++ +I++ + G L + +MP N
Sbjct: 353 ACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNV 410
Query: 380 AIWGSLLAASNIYGD 394
W S++ A +++G+
Sbjct: 411 VSWSSMINALSMHGE 425
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 39/292 (13%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M VR L + ++S + S G D A IF K D+ + T I A ++D P A
Sbjct: 273 MSVRNLFVSTAMVSGY----SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ ++ S ++PD S V+ A L ++ + +H GL+S++ + ALI M
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + R VF+++ R NV W++M+ + G+ ++A +LF
Sbjct: 389 YAKCGGLDATRDVFEKMPRR--NVVSWSSMINALSMHGEASDALSLFA------------ 434
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIH-NYIEQY 239
RM+ ENV+P+E+ + L C+ G VE G+ I + ++Y
Sbjct: 435 -------------------RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS-VITWTTMIAGLALHG 290
+ + ++D++ ++ + +AL+V E+M S V+ W ++++ +HG
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 298/482 (61%), Gaps = 39/482 (8%)
Query: 28 YAYSIFTHKSKP-DVYLYNTTIKALCQTDNPLNAVILYNKIQASAL-RPDNYSFPFVLKA 85
YA+ +F+ KP +V+++NT I+ + N ++A LY +++ S L PD +++PF++KA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
V ++ + LG IH + +G S ++V +L+ +YA+C
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC--------------------- 169
Query: 146 VWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN 205
GD+ +A +F+ M EK++++W ++I G+A+ +P EA+ L+ M +
Sbjct: 170 ------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 206 VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKAL 265
+KPD +++ LSACA++GA+ LG+ +H Y+ + GL + +N L+D+YA+ G++ +A
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR-VKPNEITFIAILSACCHV 324
+F+ M +K+ ++WT++I GLA++G G+EA+++F ME + P EITF+ IL AC H
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 337
Query: 325 GLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
G+V+ G YF M+ Y IEP+IE +GCM+DLL RAG +++A + ++ MP + N IW +
Sbjct: 338 GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
LL A ++GD +L E A +++LEP++SG+Y +LSN+YA RW++ KIRK M GV
Sbjct: 398 LLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457
Query: 445 KKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK---FAEHLQNEFSGVLE 501
KK+PG S +EV RVHEF+ GD SHP D +Y L ++ G+++ + + N + V E
Sbjct: 458 KKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEE 517
Query: 502 SD 503
+
Sbjct: 518 EE 519
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 303/543 (55%), Gaps = 64/543 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I R L ++ H+ + I + S ++ A +F +P+V+L N+ I+A Q P A
Sbjct: 42 IIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQA 101
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+++++Q L DN+++PF+LKA S + + + +H GL SD++V ALI
Sbjct: 102 FFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 121 YASCKCI---------------------------------YDARKVFDELSLR---VWNV 144
Y+ C + DAR++FDE+ R WN
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 145 AV--------------------------WNTMVAGYAKVGDLNNARALFELMT--EKNVI 176
+ W+TMV GY+K GD+ AR +F+ M KNV+
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI 236
+WT +IAGYA+ EA L +M +K D A+++ L+AC + G + LG IH+ +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 237 EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREAL 296
++ L + + NAL+DMYAK G + KA VF ++ K +++W TM+ GL +HG G+EA+
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401
Query: 297 DMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDL 356
++FSRM R ++P+++TFIA+L +C H GL++ G YF M+ Y + P++E YGC++DL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGR G L+EA K+++ MP E N IWG+LL A ++ +V++ + L +L+KL+P + GNY
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
++LSNIYA W IR M+ MGV+K G S +E+ +HEF D SHP D++Y
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Query: 477 QIL 479
Q+L
Sbjct: 582 QML 584
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 77/365 (21%)
Query: 83 LKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW 142
L+ + K + + +++H Q + L D+H+ LI + C+ A +VF+++
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ---- 78
Query: 143 NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQ 202
E NV +LI +AQ QP +A +F MQ
Sbjct: 79 -----------------------------EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQ 109
Query: 203 VENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
+ D L AC+ + + + +HN+IE+ GL++ + + NALID Y++ G +G
Sbjct: 110 RFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG 169
Query: 263 --KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
A+++FE M + ++W +M+ GL G R+A
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA------------------------- 204
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
RR F+ M R I + M+D R + +A +L +MP E N
Sbjct: 205 ----------RRLFDEMPQRDLI-----SWNTMLDGYARCREMSKAFELFEKMP-ERNTV 248
Query: 381 IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMR 440
W +++ + GD+E+ + L N + I+ YA G E+ ++ M
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKM-PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 441 DMGVK 445
G+K
Sbjct: 308 ASGLK 312
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 362 bits (929), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 287/477 (60%), Gaps = 3/477 (0%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YAY IF+ P+++++N I+ P A Y ++ S + PDN +FPF++KA
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
++ + +G + H Q V G +DV+V +L+ MYA+C I A ++F ++ R +V W
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR--DVVSW 186
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
+MVAGY K G + NAR +F+ M +N+ +W+ +I GYA+ + +AI LF M+ E V
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
+E M++ +S+CA LGA+E GE + Y+ + + + L AL+DM+ + G I KA+ V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE + ++W+++I GLA+HG +A+ FS+M P ++TF A+LSAC H GLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E G + MK +GIEP++E YGC++D+LGRAG L EAE + +M + NA I G+LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A IY + E+ E LIK++P +SG Y +LSNIYA G+W++ +R +M++ VKK
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 448 PGCSYIEVSKRVHEFVAG-DTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 503
PG S IE+ ++++F G D HP+ ++ + +I G+++ + N + D
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVD 543
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 160 LNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSA 219
L A +F + N+ + LI ++ +P++A + +M + PD I + A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 220 CAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITW 279
+++ V +GE H+ I ++G V + N+L+ MYA G I A ++F M + V++W
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 280 TTMIAGLALHGL---GRE----------------------------ALDMFSRMERARVK 308
T+M+AG G+ RE A+D+F M+R V
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 309 PNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
NE ++++S+C H+G +E G R Y ++KS + + ++D+ R G +++A
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGT--ALVDMFWRCGDIEKAI 304
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE--PHNSGNYAILS 420
+ +P E ++ W S++ ++G +I L P + A+LS
Sbjct: 305 HVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 98/242 (40%), Gaps = 34/242 (14%)
Query: 24 GFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVL 83
G + A +F +++ ++ I + + A+ L+ ++ + + V+
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 84 KAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWN 143
+ L +E G + V + + ++ + AL+ M+ C
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC------------------- 297
Query: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
GD+ A +FE + E + +SW+++I G A ++A+ F +M
Sbjct: 298 --------------GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS 343
Query: 204 ENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIG 262
P ++ A LSAC+ G VE G E N + +G+ + ++DM ++GK+
Sbjct: 344 LGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLA 403
Query: 263 KA 264
+A
Sbjct: 404 EA 405
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/523 (36%), Positives = 291/523 (55%), Gaps = 32/523 (6%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
MI L+Q+ L+++FI +C+S D A S T +P+V++YN K +P+ +
Sbjct: 51 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 110
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ LY ++ ++ P +Y++ ++KA S + H G G V + LI
Sbjct: 111 LELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFH--VKIQTTLIDF 168
Query: 121 YASCKCIYDARKVFDELSLR---VW--------------------------NVAVWNTMV 151
Y++ I +ARKVFDE+ R W N A N ++
Sbjct: 169 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 228
Query: 152 AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211
GY +G+L A +LF M K++ISWTT+I GY+Q + EAI +F +M E + PDE+
Sbjct: 229 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 212 AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271
M +SACA LG +E+G+ +H Y Q G V + +AL+DMY+K G + +AL VF N+
Sbjct: 289 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 272 KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331
K++ W ++I GLA HG +EAL MF++ME VKPN +TF+++ +AC H GLV+ GR
Sbjct: 349 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 408
Query: 332 RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391
R + M Y I +E YG M+ L +AG + EA +L+ M FE NA IWG+LL I
Sbjct: 409 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 468
Query: 392 YGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM-PGC 450
+ ++ + E A L+ LEP NSG Y +L ++YA RW + +IR MR++G++K+ PG
Sbjct: 469 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 528
Query: 451 SYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQ 493
S I + KR H F A D SH D + +L +I QM A ++Q
Sbjct: 529 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 571
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 296/489 (60%), Gaps = 13/489 (2%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
MIV GL ++ L + + C+ L YA IF S P+ +LY + A + PL+
Sbjct: 47 MIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLH 105
Query: 60 AVILYN----KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A ++ + S RP+++ +P VLK+ LS+ +H +G V V
Sbjct: 106 ASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQT 165
Query: 116 ALIQMYAS-CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKN 174
AL+ YAS I AR++FDE+S R NV W M++GYA+ GD++NA ALFE M E++
Sbjct: 166 ALLHSYASSVSHITLARQLFDEMSER--NVVSWTAMLSGYARSGDISNAVALFEDMPERD 223
Query: 175 VISWTTLIAGYAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIH 233
V SW ++A Q EA++LFRRM E +++P+E+ ++ LSACAQ G ++L + IH
Sbjct: 224 VPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIH 283
Query: 234 NYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
+ + L++ V ++N+L+D+Y K G + +A VF+ KS+ W +MI ALHG
Sbjct: 284 AFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSE 343
Query: 294 EALDMFSRMERARV---KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
EA+ +F M + + KP+ ITFI +L+AC H GLV GR YF++M +R+GIEP+IE Y
Sbjct: 344 EAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHY 403
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
GC+IDLLGRAG EA +++ M +A+ AIWGSLL A I+G ++L E A+++L+ L P
Sbjct: 404 GCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNP 463
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
+N G A+++N+Y +G W E+ + RK+++ K PG S IE+ VH+F + D SHP
Sbjct: 464 NNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHP 523
Query: 471 DFDRLYQIL 479
+ + +Y IL
Sbjct: 524 ETEEIYMIL 532
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 355 bits (910), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 276/467 (59%), Gaps = 33/467 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA +F S+PD+ ++N+ + + NPL L+ +I + PDNY+FP +LKA
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
+E GR++HC ++ GLD +V+V LI MY C+
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE---------------------- 178
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
D+++AR +F+ + E V+ + +I GYA+ ++PNEA++LFR MQ + +K
Sbjct: 179 -----------DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQV 267
P+EI +L+ LS+CA LG+++LG+WIH Y +++ V +N ALIDM+AK G + A+ +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 268 FENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
FE M+ K W+ MI A HG +++ MF RM V+P+EITF+ +L+AC H G V
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
E GR+YF+ M S++GI P I+ YG M+DLL RAG L++A + + ++P +W LLA
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A + + +++L E + + +L+ + G+Y ILSN+YA +W +RKVM+D K+
Sbjct: 408 ACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKV 467
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
PGCS IEV+ VHEF +GD +L++ L ++ ++K + ++ +
Sbjct: 468 PGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 130/288 (45%), Gaps = 35/288 (12%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD N ++ I+ + D A +F +P V YN I + + P A+ L+
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
++Q L+P+ + VL + L +++LG+ IH V V ALI M+A C
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ DA +F++ +R + W+ M+ YA G
Sbjct: 279 GSLDDAVSIFEK--MRYKDTQAWSAMIVAYANHG-------------------------- 310
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQYGLNT 243
+ +++ +F RM+ ENV+PDEI L L+AC+ G VE G ++ + ++G+
Sbjct: 311 -----KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290
+ +++D+ +++G + A + + + + + + W ++A + H
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/502 (38%), Positives = 294/502 (58%), Gaps = 12/502 (2%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G+D+ LL R + + + YA +F H +LYN I+A P +++LY
Sbjct: 15 GVDETKDLLQRLLLIPNLV----YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY 70
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + LRP +++F F+ A S+ R +H Q +G +SD LI YA
Sbjct: 71 NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKL 130
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ AR+VFDE+S R +V VWN M+ GY + GD+ A LF+ M KNV SWTT+I+G
Sbjct: 131 GALCCARRVFDEMSKR--DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISG 188
Query: 185 YAQMDQPNEAITLFRRMQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++Q +EA+ +F M+ + +VKP+ I +++ L ACA LG +E+G + Y + G
Sbjct: 189 FSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD 248
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKN-KSVITWTTMIAGLALHGLGREALDMFSRM 302
+ + NA I+MY+K G I A ++FE + N +++ +W +MI LA HG EAL +F++M
Sbjct: 249 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 308
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
R KP+ +TF+ +L AC H G+V G+ F M+ + I PK+E YGCMIDLLGR G
Sbjct: 309 LREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGK 368
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
LQEA L++ MP + +A +WG+LL A + +G+VE+ E A + L KLEP N GN I+SNI
Sbjct: 369 LQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNI 428
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSY-IEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
YA +W+ ++RK+M+ + K G SY +EV VH+F D SHP +YQ+L +
Sbjct: 429 YAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEE 488
Query: 482 INGQMKFAEHLQNEFSGVLESD 503
I +MK ++ F +L+ +
Sbjct: 489 IFRRMKLE---KSRFDSLLQPE 507
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 352 bits (904), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 293/498 (58%), Gaps = 2/498 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL N ++ + + S G D A +F + K DV+ +N I + ++ L
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + + P + + VL A K+ +L + +H + + + AL+ YA+C
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
+ A ++F + R +V W ++V GY + G+L AR F+ M ++ ISWT +I G
Sbjct: 285 GEMDIAVRIFRSMKAR--DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDG 342
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Y + NE++ +FR MQ + PDE M++ L+ACA LG++E+GEWI YI++ +
Sbjct: 343 YLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKND 402
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
V + NALIDMY K G KA +VF +M + TWT M+ GLA +G G+EA+ +F +M+
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++P++IT++ +LSAC H G+V+ R++F M+S + IEP + YGCM+D+LGRAG ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 365 EAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYA 424
EA ++LR+MP N+ +WG+LL AS ++ D + E A + +++LEP N YA+L NIYA
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 425 ILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKING 484
RW + ++R+ + D+ +KK PG S IEV+ HEFVAGD SH + +Y L ++
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Query: 485 QMKFAEHLQNEFSGVLES 502
+ FA +L + + E+
Sbjct: 643 ESTFAAYLPDTSELLFEA 660
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 191/406 (47%), Gaps = 68/406 (16%)
Query: 2 IVRGLDQNNHLLSR-FIDSCSSLG-FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
I RG+ N + F+ CS LG YAY +F +PDV ++N IK + D
Sbjct: 58 ITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGE 117
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKL-STIELGREIHCQTVGTGLDSDVHVVAALI 118
V LY + + PD+++FPF+L + + + G+++HC V GL S+++V AL+
Sbjct: 118 GVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
+MY+ C + AR VFD +V WN M++GY +
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKE--DVFSWNLMISGYNR---------------------- 213
Query: 179 TTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
M + E+I L M+ V P + +L LSAC+++ +L + +H Y+ +
Sbjct: 214 ---------MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG---LGR-- 293
+ L NAL++ YA G++ A+++F +MK + VI+WT+++ G G L R
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 294 --------------------------EALDMFSRMERARVKPNEITFIAILSACCHVGLV 327
E+L++F M+ A + P+E T +++L+AC H+G +
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
E+G + + I+ + +ID+ + G ++A+K+ M
Sbjct: 385 EIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
G ++ A LF + E +V+ W +I G++++D E + L+ M E V PD L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 218 SACAQLG-AVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
+ + G A+ G+ +H ++ ++GL + + + NAL+ MY+ G + A VF+ + V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
+W MI+G E++++ MER V P +T + +LSAC V +L +R
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ S EP + +++ G + A ++ R M + W S++ G+++
Sbjct: 262 V-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNLK 319
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
L A + ++ + ++ I+ + Y G +NES +I + M+ G+
Sbjct: 320 L---ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>sp|O80488|PPR23_ARATH Pentatricopeptide repeat-containing protein At1g09190
OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1
Length = 484
Score = 351 bits (900), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 270/450 (60%), Gaps = 4/450 (0%)
Query: 6 LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYN 65
L +N LL+ FI C SL SDYA +F+H P+V ++N IK PL ++ ++
Sbjct: 32 LHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFS 91
Query: 66 KIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCK 125
+++ + D Y++ +LK+ LS + G+ +H + + TG + ++++Y S
Sbjct: 92 SMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGG 151
Query: 126 CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGY 185
+ DA+KVFDE+S R NV VWN M+ G+ GD+ LF+ M+E++++SW ++I+
Sbjct: 152 RMGDAQKVFDEMSER--NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSL 209
Query: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL-NTI 244
++ + EA+ LF M + PDE ++ L A LG ++ G+WIH+ E GL
Sbjct: 210 SKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDF 269
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-E 303
+ + NAL+D Y KSG + A +F M+ ++V++W T+I+G A++G G +D+F M E
Sbjct: 270 ITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIE 329
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+V PNE TF+ +L+ C + G VE G F +M R+ +E + E YG M+DL+ R+G +
Sbjct: 330 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRI 389
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
EA K L+ MP ANAA+WGSLL+A +GDV+L E A L+K+EP NSGNY +LSN+Y
Sbjct: 390 TEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLY 449
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYI 453
A GRW + K+R +M+ ++K G S I
Sbjct: 450 AEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 350 bits (899), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/476 (37%), Positives = 285/476 (59%), Gaps = 8/476 (1%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+S G ++ ++F PD++L+ I A +LY ++ +S + P+ ++F
Sbjct: 75 ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFS 134
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+LK+ + + G+ IH + GL D +V L+ +YA + A+KVFD + R
Sbjct: 135 SLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPER 190
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ M+ YAK G++ ARALF+ M E++++SW +I GYAQ PN+A+ LF++
Sbjct: 191 --SLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 201 MQVE-NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
+ E KPDEI ++AALSAC+Q+GA+E G WIH +++ + V + LIDMY+K G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 260 KIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-ARVKPNEITFIAIL 318
+ +A+ VF + K ++ W MIAG A+HG ++AL +F+ M+ ++P +ITFI L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 319 SACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEAN 378
AC H GLV G R F M YGI+PKIE YGC++ LLGRAG L+ A + ++ M +A+
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 379 AAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKV 438
+ +W S+L + ++GD LG+ ++LI L NSG Y +LSNIYA +G + K+R +
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 439 MRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQN 494
M++ G+ K PG S IE+ +VHEF AGD H +Y +L KI+ ++K ++ N
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 38/273 (13%)
Query: 153 GYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIA 212
YA G + ++ ALF + ++ +T I + ++A L+ ++ + P+E
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 213 MLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMK 272
+ L +C + + G+ IH ++ ++GL + L+D+YAK G + A +VF+ M
Sbjct: 133 FSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 273 NKS-------------------------------VITWTTMIAGLALHGLGREALDMFSR 301
+S +++W MI G A HG +AL +F +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 302 -MERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRA 360
+ + KP+EIT +A LSAC +G +E GR +KS I ++ +ID+ +
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR-IRLNVKVCTGLIDMYSKC 307
Query: 361 GYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
G L+EA + P + W +++A ++G
Sbjct: 308 GSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHG 339
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
LN L YA GKI +L +F + + +T I +++GL +A ++ ++ +
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 307 VKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQE 365
+ PNE TF ++L +C + G+ + +++K GI+P + ++D+ + G +
Sbjct: 126 INPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVAT--GLVDVYAKGGDVVS 179
Query: 366 AEKLLRRMP 374
A+K+ RMP
Sbjct: 180 AQKVFDRMP 188
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 286/524 (54%), Gaps = 39/524 (7%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I+ L N+ L + + + +SL A +F + +V + N I++
Sbjct: 65 IILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEG 124
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
V ++ + +RPD+Y+FP VLKA TI +GR+IH GL S + V L+ M
Sbjct: 125 VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSM 184
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA----------------- 163
Y C + +AR V DE+S R +V WN++V GYA+ ++A
Sbjct: 185 YGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242
Query: 164 --------------------RALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203
+ +F M +K+++SW +I Y + P EA+ L+ RM+
Sbjct: 243 TMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA 302
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+ +PD +++ + L AC A+ LG+ IH YIE+ L + L NALIDMYAK G + K
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A VFENMK++ V++WT MI+ G G +A+ +FS+++ + + P+ I F+ L+AC H
Sbjct: 363 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
Query: 324 VGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWG 383
GL+E GR F +M Y I P++E CM+DLLGRAG ++EA + ++ M E N +WG
Sbjct: 423 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWG 482
Query: 384 SLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMG 443
+LL A ++ D ++G A L +L P SG Y +LSNIYA GRW E IR +M+ G
Sbjct: 483 ALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 542
Query: 444 VKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMK 487
+KK PG S +EV++ +H F+ GD SHP D +Y+ L + +MK
Sbjct: 543 LKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 39/307 (12%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
R +H + + L + + L++ YAS K + ARKVFDE+ R NV + N M+ Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER--NVIIINVMIRSY- 115
Query: 156 KVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLA 215
+NN G+ E + +F M NV+PD
Sbjct: 116 ----VNN---------------------GFY-----GEGVKVFGTMCGCNVRPDHYTFPC 145
Query: 216 ALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKS 275
L AC+ G + +G IH + GL++ + + N L+ MY K G + +A V + M +
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 276 VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN 335
V++W +++ G A + +AL++ ME ++ + T ++L A + + Y
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--MYVK 263
Query: 336 IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMP---FEANAAIWGSLLAASNIY 392
M + G + + + MI + + EA +L RM FE +A S+L A
Sbjct: 264 DMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 393 GDVELGE 399
+ LG+
Sbjct: 323 SALSLGK 329
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 21/235 (8%)
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
++DQ + T+F QV + PD + +H+ I L
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPD----------------IRTLRTVHSRIILEDLRCNSS 75
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L L+ YA + A +VF+ + ++VI MI +G E + +F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V+P+ TF +L AC G + +GR+ ++ G+ + ++ + G+ G+L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 367 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
+L M + W SL+ A N D L C +K+ H++G A L
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS-HDAGTMASL 247
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 294/488 (60%), Gaps = 9/488 (1%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+I GL + SR + C+S +YAY +FT + + +++NT I+ ++ P
Sbjct: 48 LIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEM 107
Query: 60 AVILYNKIQASA--LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
A+ ++ + S+ ++P ++P V KA +L GR++H + GL+ D + +
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ MY +C C+ +A ++F L + ++V WN+M+ G+AK G ++ A+ LF+ M ++N +S
Sbjct: 168 LHMYVTCGCLIEAWRIF--LGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVS 225
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI- 236
W ++I+G+ + + +A+ +FR MQ ++VKPD M++ L+ACA LGA E G WIH YI
Sbjct: 226 WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 237 -EQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
++ LN+IV ALIDMY K G I + L VFE K + W +MI GLA +G A
Sbjct: 286 RNRFELNSIVV--TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+D+FS +ER+ ++P+ ++FI +L+AC H G V +F +MK +Y IEP I+ Y M++
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+LG AG L+EAE L++ MP E + IW SLL+A G+VE+ + A + L KL+P +
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCG 463
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSN YA G + E+ + R +M++ ++K GCS IEV VHEF++ +HP +
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEI 523
Query: 476 YQILCKIN 483
Y +L +N
Sbjct: 524 YSLLDILN 531
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 69/334 (20%)
Query: 87 VKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAV 146
+ ST+ ++IH + TGL SD V A+ + +
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDT-VTASRVLAFCC----------------------- 68
Query: 147 WNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM--QVE 204
A D+N A +F + KN W T+I G+++ P AI++F M
Sbjct: 69 --------ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSP 120
Query: 205 NVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY--------- 255
+VKP + + A +LG G +H + + GL + N ++ MY
Sbjct: 121 SVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180
Query: 256 ----------------------AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGR 293
AK G I +A +F+ M ++ ++W +MI+G +G +
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 294 EALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGC 352
+ALDMF M+ VKP+ T +++L+AC ++G E GR I+++R+ + +
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV--VTA 298
Query: 353 MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
+ID+ + G ++E + P + + W S++
Sbjct: 299 LIDMYCKCGCIEEGLNVFECAP-KKQLSCWNSMI 331
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 291/484 (60%), Gaps = 8/484 (1%)
Query: 1 MIVRGLDQNNHLLSRFID--SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
+I GL + +S+ + + SS G DYAY + S P Y +N I+ + NP
Sbjct: 31 LITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPE 90
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
++ +Y ++ L PD+ ++PF++K+ +LS +LG +HC V +GL+ D+ + LI
Sbjct: 91 KSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLI 150
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISW 178
MY S + ARK+FDE+ + N+ WN+++ YAK GD+ +AR +F+ M+E++V++W
Sbjct: 151 HMYGSFRDQASARKLFDEMPHK--NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 179 TTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
+++I GY + + N+A+ +F +M ++ + K +E+ M++ + ACA LGA+ G+ +H YI
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVF--ENMKNKSVITWTTMIAGLALHGLGREA 295
L V L +LIDMYAK G IG A VF ++K + W +I GLA HG RE+
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F +M +++ P+EITF+ +L+AC H GLV+ +F +K G EPK E Y CM+D
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVD 387
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
+L RAG +++A + MP + ++ G+LL +G++EL E + LI+L+PHN G
Sbjct: 388 VLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGR 447
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y L+N+YAI ++ + +R+ M GVKK+ G S +++ H F+A D +H D++
Sbjct: 448 YVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKI 507
Query: 476 YQIL 479
Y +L
Sbjct: 508 YAVL 511
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 348 bits (893), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/466 (39%), Positives = 267/466 (57%), Gaps = 35/466 (7%)
Query: 16 FIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPD 75
I +S G+ + A +F DV +N I +T N A+ L+ + + +RPD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 76 NYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFD 135
+ V+ A + +IELGR++H G S++ +V ALI +Y+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS------------- 312
Query: 136 ELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAI 195
K G+L A LFE + K+VISW TLI GY M+ EA+
Sbjct: 313 --------------------KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY--GLNTIVPLNNALID 253
LF+ M P+++ ML+ L ACA LGA+++G WIH YI++ G+ L +LID
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEIT 313
MYAK G I A QVF ++ +KS+ +W MI G A+HG + D+FSRM + ++P++IT
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 314 FIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRM 373
F+ +LSAC H G+++LGR F M Y + PK+E YGCMIDLLG +G +EAE+++ M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 374 PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESG 433
E + IW SLL A ++G+VELGE ++LIK+EP N G+Y +LSNIYA GRWNE
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 434 KIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
K R ++ D G+KK+PGCS IE+ VHEF+ GD HP +Y +L
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 228/397 (57%), Gaps = 7/397 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCS-SLGFS--DYAYSIFTHKSKPDVYLYNTTIKALCQTDNP 57
MI GL N+ LS+ I+ C S F YA S+F +P++ ++NT + + +P
Sbjct: 56 MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 115
Query: 58 LNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++A+ LY + + L P++Y+FPFVLK+ K + G++IH + G D D++V +L
Sbjct: 116 VSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 175
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
I MY + DA KVFD+ R +V + ++ GYA G + NA+ LF+ + K+V+S
Sbjct: 176 ISMYVQNGRLEDAHKVFDKSPHR--DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVS 233
Query: 178 WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
W +I+GYA+ EA+ LF+ M NV+PDE M+ +SACAQ G++ELG +H +I+
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+G + + + NALID+Y+K G++ A +FE + K VI+W T+I G L +EAL
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDL 356
+F M R+ PN++T ++IL AC H+G +++GR + I K G+ +ID+
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ G ++ A ++ + + + W +++ ++G
Sbjct: 414 YAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 449
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 297/544 (54%), Gaps = 68/544 (12%)
Query: 1 MIVRGLDQNNHLLSRF-IDSCSSLGFSDYAYSIFTHK-SKPDVYLYNTTIKALCQTDNPL 58
M+ ++ N + ++F + S S++G YA +F + + D +L N+ IKA +T
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIG-YARKLFDQRPQRDDSFLSNSMIKAYLETRQYP 59
Query: 59 NAVILYNKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAAL 117
++ LY + + + PDN++F + K+ + G ++H Q G +D++V +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 118 IQMYASCKCIYDARKVFDELSLR------------------------------VWNVAVW 147
+ MYA + AR FDE+ R V +V ++
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 148 NTMVAGYAKVGDLNNARALFELMT-------------------------------EKNVI 176
N M+ G+ K GD+ +AR LF+ MT E+N++
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 177 SWTTLIAGYAQMDQPNEAITLFRRMQ-VENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
SW T+I GY Q QP E I LF+ MQ ++ PD++ +L+ L A + GA+ LGEW H +
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+++ L+ V + A++DMY+K G+I KA ++F+ M K V +W MI G AL+G R A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
LD+F M KP+EIT +A+++AC H GLVE GR++F++M+ G+ KIE YGCM+D
Sbjct: 360 LDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVD 417
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG L+EAE L+ MPFE N I S L+A Y D+E E L+ ++LEP N GN
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +L N+YA RW++ G ++ VMR KK GCS IE++ V EF++GDT+HP +
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI 537
Query: 476 YQIL 479
+ +L
Sbjct: 538 HLVL 541
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 276/464 (59%), Gaps = 10/464 (2%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A F + DV +NT I Q+ A L+++ D +++ ++ ++
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQ 293
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
+E RE+ + + + A++ Y + + A+++FD + R NV+ WN
Sbjct: 294 NRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR--NVSTWN 347
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
TM+ GYA+ G ++ A+ LF+ M +++ +SW +IAGY+Q EA+ LF +M+ E +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
+ + +ALS CA + A+ELG+ +H + + G T + NAL+ MY K G I +A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVE 328
+ M K +++W TMIAG + HG G AL F M+R +KP++ T +A+LSAC H GLV+
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 329 LGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
GR+YF M YG+ P + Y CM+DLLGRAG L++A L++ MPFE +AAIWG+LL A
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 389 SNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMP 448
S ++G+ EL E A + +EP NSG Y +LSN+YA GRW + GK+R MRD GVKK+P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 449 GCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHL 492
G S+IE+ + H F GD HP+ D ++ L +++ +MK A ++
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 37/288 (12%)
Query: 130 ARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMD 189
ARK+FDE+ R ++ WN M+ GY + +L AR LFE+M E++V SW T+++GYAQ
Sbjct: 114 ARKLFDEMPER--DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 190 QPNEAITLFRRMQ--------------VENVKPDEIAML-------AALSACAQLGAVEL 228
++A ++F RM V+N K +E ML A +S LG
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK 231
Query: 229 GEWI---HNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 285
+ I + + + +V N +I YA+SGKI +A Q+F+ + V TWT M++G
Sbjct: 232 KKKIVEARQFFDSMNVRDVVSW-NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 286 LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEP 345
+ + EA ++F +M + NE+++ A+L+ +E+ + F++M R
Sbjct: 291 YIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----- 341
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
+ + MI + G + EA+ L +MP + + W +++A + G
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSG 388
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 283/492 (57%), Gaps = 41/492 (8%)
Query: 1 MIVRGLDQNNHLLSRFI--DSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPL 58
M+V GL N ++ I S S G YA+ +F KPDV + N ++ Q+ P
Sbjct: 35 MVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPE 94
Query: 59 NAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALI 118
V LY +++ + PD Y+F FVLKA KL G H + V G + +V ALI
Sbjct: 95 KTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALI 154
Query: 119 QMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG-------------------- 158
+A+C + A ++FD+ S + VA W++M +GYAK G
Sbjct: 155 LFHANCGDLGIASELFDD-SAKAHKVA-WSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAW 212
Query: 159 -----------DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVK 207
++++AR LF+ TEK+V++W +I+GY P EA+ +F+ M+
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH 272
Query: 208 PDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIV----PLNNALIDMYAKSGKIG 262
PD + +L+ LSACA LG +E G+ +H YI E +++ + P+ NALIDMYAK G I
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 332
Query: 263 KALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACC 322
+A++VF +K++ + TW T+I GLALH +++MF M+R +V PNE+TFI ++ AC
Sbjct: 333 RAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACS 391
Query: 323 HVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
H G V+ GR+YF++M+ Y IEP I+ YGCM+D+LGRAG L+EA + M E NA +W
Sbjct: 392 HSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVW 451
Query: 383 GSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDM 442
+LL A IYG+VELG+ A + L+ + SG+Y +LSNIYA G+W+ K+RK+ D
Sbjct: 452 RTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDT 511
Query: 443 GVKKMPGCSYIE 454
VKK G S IE
Sbjct: 512 RVKKPTGVSLIE 523
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 273/481 (56%), Gaps = 9/481 (1%)
Query: 14 SRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALR 73
S +D S G + A +F +V +N+ I Q + A+ ++ + S +
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 74 PDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYASCKCIYDARK 132
PD + V+ A LS I++G+E+H + V L +D+ + A + MYA C I +AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
+FD + +R NV +M++GYA AR +F M E+NV+SW LIAGY Q +
Sbjct: 311 IFDSMPIR--NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN------TIVP 246
EA++LF ++ E+V P + L ACA L + LG H ++ ++G +
Sbjct: 369 EALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIF 428
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
+ N+LIDMY K G + + VF M + ++W MI G A +G G EAL++F M +
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
KP+ IT I +LSAC H G VE GR YF+ M +G+ P + Y CM+DLLGRAG+L+EA
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 367 EKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAIL 426
+ ++ MP + ++ IWGSLLAA ++ ++ LG+ + L+++EP NSG Y +LSN+YA L
Sbjct: 549 KSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAEL 608
Query: 427 GRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQM 486
G+W + +RK MR GV K PGCS+I++ H F+ D SHP +++ +L + +M
Sbjct: 609 GKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Query: 487 K 487
+
Sbjct: 669 R 669
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 174/322 (54%), Gaps = 9/322 (2%)
Query: 75 DNYSFPFVLKAVVK--LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARK 132
D+ F +L + +K LS I + R +H + +G +++ + LI Y+ C + D R+
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 133 VFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPN 192
VFD++ R N+ WN++V G K+G L+ A +LF M E++ +W ++++G+AQ D+
Sbjct: 77 VFDKMPQR--NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 193 EAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALI 252
EA+ F M E +E + + LSAC+ L + G +H+ I + + V + +AL+
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 253 DMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEI 312
DMY+K G + A +VF+ M +++V++W ++I +G EALD+F M +RV+P+E+
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 313 TFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRR 372
T +++SAC + +++G+ + + I +D+ + ++EA +
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 373 MPFE----ANAAIWGSLLAASN 390
MP + I G +AAS
Sbjct: 315 MPIRNVIAETSMISGYAMAAST 336
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 189/416 (45%), Gaps = 73/416 (17%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
+ LGF D A S+F + D +N+ + Q D A+ + + + YSF
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VL A L+ + G ++H + SDV++ +AL+ MY+ C + DA++VFDE+ R
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
NV WN+++ + + G A +F++M E
Sbjct: 217 --NVVSWNSLITCFEQNGPAVEALDVFQMMLES--------------------------- 247
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPLNNALIDMYAKSG 259
V+PDE+ + + +SACA L A+++G+ +H ++ L + L+NA +DMYAK
Sbjct: 248 ----RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 260 KIGKALQVFENMK-------------------------------NKSVITWTTMIAGLAL 288
+I +A +F++M ++V++W +IAG
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 289 HGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELG-RRYFNIMKSRY----GI 343
+G EAL +F ++R V P +F IL AC + + LG + + +++K + G
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 344 EPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 397
E I +ID+ + G ++E + R+M E + W +++ A N YG+ L
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEAL 478
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/439 (38%), Positives = 262/439 (59%), Gaps = 6/439 (1%)
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
AV+++ KI PD + VL +V + +GR IH + GL D V++A+I
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEK----NV 175
MY +Y +F++ + V N + G ++ G ++ A +FEL E+ NV
Sbjct: 296 MYGKSGHVYGIISLFNQFEM--MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
+SWT++IAG AQ + EA+ LFR MQV VKP+ + + + L AC + A+ G H +
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ L V + +ALIDMYAK G+I + VF M K+++ W +++ G ++HG +E
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
+ +F + R R+KP+ I+F ++LSAC VGL + G +YF +M YGI+P++E Y CM++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGRAG LQEA L++ MPFE ++ +WG+LL + + +V+L E A + L LEP N G
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
Y +LSNIYA G W E IR M +G+KK PGCS+I+V RV+ +AGD SHP D++
Sbjct: 594 YVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Query: 476 YQILCKINGQMKFAEHLQN 494
+ + +I+ +M+ + H N
Sbjct: 654 TEKMDEISKEMRKSGHRPN 672
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 211/428 (49%), Gaps = 43/428 (10%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + ++ ++ I S S+ + A + P +Y +++ I AL + ++ ++
Sbjct: 45 GAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVF 104
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
+++ + L PD++ P + K +LS ++G++IHC + +GLD D V ++ MY C
Sbjct: 105 SRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC 164
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNA-RALFELMT---EKNVISWTT 180
+ DARKVFD +S + +V + ++ YA+ G L R L E+ + E N++SW
Sbjct: 165 GRMGDARKVFDRMSDK--DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
+++G+ + EA+ +F+++ PD++ + + L + + +G IH Y+ + G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 241 LNTIVPLNNALIDMYAKSGK-------------------------------IGKALQVFE 269
L + +A+IDMY KSG + KAL++FE
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 270 NMKNKS----VITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
K ++ V++WT++IAG A +G EAL++F M+ A VKPN +T ++L AC ++
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 326 LVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSL 385
+ GR R + + +ID+ + G + ++ + MP + N W SL
Sbjct: 403 ALGHGRSTHGF-AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSL 460
Query: 386 LAASNIYG 393
+ +++G
Sbjct: 461 MNGFSMHG 468
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 16 FIDSCSSLGFSDYAYSIFT----HKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASA 71
+I S G D A +F + +V + + I Q + A+ L+ ++Q +
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 72 LRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDAR 131
++P++ + P +L A ++ + GR H V L +VHV +ALI MYA C I ++
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 132 KVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFE-LMTEK---NVISWTTLIAGYAQ 187
VF+ + + N+ WN+++ G++ G ++FE LM + + IS+T+L++ Q
Sbjct: 444 IVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 188 MDQPNEAITLFRRMQVE-NVKP 208
+ +E F+ M E +KP
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKP 523
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 283/473 (59%), Gaps = 8/473 (1%)
Query: 4 RGLDQNNHLLSRFIDSCSSLG--FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
+GLDQ+ ++L++ I + + LG YA + + +L+ I+ A+
Sbjct: 75 KGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAI 134
Query: 62 ILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMY 121
+Y ++ + P +++F +LKA + + LGR+ H QT V+V +I MY
Sbjct: 135 AMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMY 194
Query: 122 ASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTL 181
C+ I ARKVFDE+ R +V W ++A YA+VG++ A LFE + K++++WT +
Sbjct: 195 VKCESIDCARKVFDEMPER--DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAM 252
Query: 182 IAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGL 241
+ G+AQ +P EA+ F RM+ ++ DE+ + +SACAQLGA + + ++ G
Sbjct: 253 VTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY 312
Query: 242 NTI--VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
+ V + +ALIDMY+K G + +A+ VF +M NK+V T+++MI GLA HG +EAL +F
Sbjct: 313 SPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLF 372
Query: 300 SRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
M + +KPN +TF+ L AC H GLV+ GR+ F+ M +G++P + Y CM+DLLG
Sbjct: 373 HYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLG 432
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
R G LQEA +L++ M E + +WG+LL A I+ + E+ E A +HL +LEP GNY +
Sbjct: 433 RTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYIL 492
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSY-IEVSKRVHEFVAGDTSHP 470
LSN+YA G W ++RK++++ G+KK P S+ ++ + ++H+F G+ +HP
Sbjct: 493 LSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/493 (36%), Positives = 288/493 (58%), Gaps = 9/493 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GL+ ++++ + + +SLG + + +F + DV +N I + +A+ ++
Sbjct: 76 GLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVF 135
Query: 65 NKI-QASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++ Q S L+ D + L A L +E+G I+ + V T + V + AL+ M+
Sbjct: 136 KRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCK 194
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C+ AR VFD S+R NV W +MV GY G ++ AR LFE K+V+ WT ++
Sbjct: 195 CGCLDKARAVFD--SMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMN 252
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q ++ +EA+ LFR MQ ++PD +++ L+ CAQ GA+E G+WIH YI + +
Sbjct: 253 GYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV 312
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ AL+DMYAK G I AL+VF +K + +WT++I GLA++G+ ALD++ ME
Sbjct: 313 DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME 372
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
V+ + ITF+A+L+AC H G V GR+ F+ M R+ ++PK E C+IDLL RAG L
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLL 432
Query: 364 QEAEKLLRRMPFEANAA---IWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILS 420
EAE+L+ +M E++ ++ SLL+A+ YG+V++ E + L K+E +S + +L+
Sbjct: 433 DEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLA 492
Query: 421 NIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT--SHPDFDRLYQI 478
++YA RW + +R+ M+D+G++K PGCS IE+ HEF+ GD SHP D + +
Sbjct: 493 SVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSM 552
Query: 479 LCKINGQMKFAEH 491
L + M EH
Sbjct: 553 LHQTTNLMLDLEH 565
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 188/382 (49%), Gaps = 72/382 (18%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P + +YN +K+L + + L+ +++ L PDN++ P VLK++ +L + G ++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
H V GL+ D +V +L+ MYAS I KVFDE+ R +V WN +++ Y
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR--DVVSWNGLISSY---- 122
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAAL 217
+ N R FE +AI +F+RM Q N+K DE +++ L
Sbjct: 123 -VGNGR--FE------------------------DAIGVFKRMSQESNLKFDEGTIVSTL 155
Query: 218 SACAQLGAVELGEWIHNY-IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
SAC+ L +E+GE I+ + + ++ ++ V + NAL+DM+ K G + KA VF++M++K+V
Sbjct: 156 SACSALKNLEIGERIYRFVVTEFEMS--VRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 277 ITWTTMIAGLALHG-----------------------------LGR--EALDMFSRMERA 305
WT+M+ G G R EAL++F M+ A
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 306 RVKPNEITFIAILSACCHVGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
++P+ +++L+ C G +E G+ I ++R ++ + ++D+ + G ++
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT--ALVDMYAKCGCIE 331
Query: 365 EAEKLLRRMPFEANAAIWGSLL 386
A ++ + E + A W SL+
Sbjct: 332 TALEVFYEIK-ERDTASWTSLI 352
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 147/309 (47%), Gaps = 22/309 (7%)
Query: 169 LMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVEL 228
L+ +++ + ++ A + + LF ++ + + PD + L + +L V
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 229 GEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLAL 288
GE +H Y + GL ++N+L+ MYA GKI +VF+ M + V++W +I+
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 289 HGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKI 347
+G +A+ +F RM + + +K +E T ++ LSAC + +E+G R + + + + + +I
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 348 EQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC-ALQHLI 406
++D+ + G L +A + M + N W S+ ++G V G + L
Sbjct: 185 GN--ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSM-----VFGYVSTGRIDEARVLF 236
Query: 407 KLEP-HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK--------MPGCSY---IE 454
+ P + + + N Y R++E+ ++ + M+ G++ + GC+ +E
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 455 VSKRVHEFV 463
K +H ++
Sbjct: 297 QGKWIHGYI 305
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 338 bits (866), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 287/489 (58%), Gaps = 6/489 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M+VR + N +++ + +G D A + F ++ D+ +N+ I Q L A
Sbjct: 207 MVVRDISSWNAMIALHM----QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 61 VILYNK-IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
+ +++K ++ S L PD ++ VL A L + +G++IH V TG D V+ ALI
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
MY+ C + AR++ ++ + + + ++ GY K+GD+N A+ +F + +++V++WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+I GY Q EAI LFR M +P+ + A LS + L ++ G+ IH +
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHGLGREALDM 298
G V ++NALI MYAK+G I A + F+ ++ + ++WT+MI LA HG EAL++
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M ++P+ IT++ + SAC H GLV GR+YF++MK I P + Y CM+DL G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RAG LQEA++ + +MP E + WGSLL+A ++ +++LG+ A + L+ LEP NSG Y+
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L+N+Y+ G+W E+ KIRK M+D VKK G S+IEV +VH F D +HP+ + +Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 682
Query: 479 LCKINGQMK 487
+ KI ++K
Sbjct: 683 MKKIWDEIK 691
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 166/308 (53%), Gaps = 37/308 (12%)
Query: 98 IHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKV 157
+HC+ + +GL V+++ L+ +Y+ ARK+FDE+ LR WNT+++ Y+K
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR--TAFSWNTVLSAYSKR 93
Query: 158 GDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAAL 217
GD+++ F+ + +++ +SWTT+I GY + Q ++AI + M E ++P + + L
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 218 SACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG------------------ 259
++ A +E G+ +H++I + GL V ++N+L++MYAK G
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 260 ----------KIGK---ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER-A 305
++G+ A+ FE M + ++TW +MI+G G ALD+FS+M R +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 306 RVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364
+ P+ T ++LSAC ++ + +G++ + +I+ + + I + +I + R G ++
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVE 331
Query: 365 EAEKLLRR 372
A +L+ +
Sbjct: 332 TARRLIEQ 339
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 190/411 (46%), Gaps = 39/411 (9%)
Query: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
S G D F + D + T I A+ + + + P ++
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
VL +V +E G+++H V GL +V V +L+ MYA C A+ VFD + +R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
+++ WN M+A + +VG ++ A A FE M E+++++W ++I+G+ Q A+ +F +
Sbjct: 211 --DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 201 MQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSG 259
M ++ + PD + + LSACA L + +G+ IH++I G + + NALI MY++ G
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 260 ------------------------------KIG---KALQVFENMKNKSVITWTTMIAGL 286
K+G +A +F ++K++ V+ WT MI G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 287 ALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR-YFNIMKSRYGIEP 345
HG EA+++F M +PN T A+LS + + G++ + + +KS G
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS--GEIY 446
Query: 346 KIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ +I + +AG + A + + E + W S++ A +G E
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/157 (17%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 249 NALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308
N ++ Y+K G + + F+ + + ++WTTMI G G +A+ + M + ++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 309 PNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEK 368
P + T +L++ +E G++ + + + G+ + ++++ + G A+
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFI-VKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 369 LLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHL 405
+ RM + + W +++A G ++L + +
Sbjct: 203 VFDRMVVR-DISSWNAMIALHMQVGQMDLAMAQFEQM 238
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 334 bits (857), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 281/494 (56%), Gaps = 9/494 (1%)
Query: 1 MIVRG-LDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+IV G L N+L + + LG A +F PDV +N I + L
Sbjct: 156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE 215
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIH--CQTVGTGLDSDVHVVAAL 117
A+ LY K+ + + PD Y+ +L LS I LG+ +H + G S++ + AL
Sbjct: 216 ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNAL 275
Query: 118 IQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS 177
+ MY CK A++ FD + + ++ WNTMV G+ ++GD+ A+A+F+ M +++++S
Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKK--DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVS 333
Query: 178 WTTLIAGYAQM--DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
W +L+ GY++ DQ + VE VKPD + M++ +S A G + G W+H
Sbjct: 334 WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGL 393
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
+ + L L++ALIDMY K G I +A VF+ K V WT+MI GLA HG G++A
Sbjct: 394 VIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F RM+ V PN +T +A+L+AC H GLVE G FN MK ++G +P+ E YG ++D
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 356 LLGRAGYLQEAEKLL-RRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSG 414
LL RAG ++EA+ ++ ++MP + ++WGS+L+A D+E E AL L+KLEP G
Sbjct: 514 LLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG 573
Query: 415 NYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDT-SHPDFD 473
Y +LSNIYA +GRW S K R+ M + GVKK G S + + +H FVA + +HP +
Sbjct: 574 GYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWT 633
Query: 474 RLYQILCKINGQMK 487
+ +IL + +MK
Sbjct: 634 EIKRILQHLYNEMK 647
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 193/422 (45%), Gaps = 82/422 (19%)
Query: 39 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
P+V++YNT I A+ + N LY+ + + PD +F +++KA LS + ++I
Sbjct: 98 PNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQI 152
Query: 99 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 158
HC + +G LSL + +WN++V Y ++G
Sbjct: 153 HCHIIVSGC-----------------------------LSLGNY---LWNSLVKFYMELG 180
Query: 159 DLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALS 218
+ A +F M +V S+ +I GYA+ EA+ L+ +M + ++PDE +L+ L
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV 240
Query: 219 ACAQLGAVELGEWIHNYIEQYG--LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSV 276
C L + LG+ +H +IE+ G ++ + L+NAL+DMY K + G A + F+ MK K +
Sbjct: 241 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM 300
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMER-------------------------------- 304
+W TM+ G G A +F +M +
Sbjct: 301 RSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTI 360
Query: 305 -ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+VKP+ +T ++++S + G + G R+ + + R ++ +ID+ + G +
Sbjct: 361 VEKVKPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLE-----PHNSGNYAI 418
+ A + + E + A+W S++ +G+ G+ ALQ +++ P+N A+
Sbjct: 420 ERAFMVFKTAT-EKDVALWTSMITGLAFHGN---GQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 419 LS 420
L+
Sbjct: 476 LT 477
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 33/206 (16%)
Query: 273 NKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC----------C 322
N +V + TMI+ A+ E ++S M R RV P+ TF+ ++ A C
Sbjct: 97 NPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHC 154
Query: 323 HV---GLVELGRRYFNIMKSRY------GI---------EPKIEQYGCMIDLLGRAGYLQ 364
H+ G + LG +N + Y G+ P + + MI + G+
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 365 EAEKLLRRM---PFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSN 421
EA KL +M E + SLL D+ LG+ + + P S N + +
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNA 274
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKM 447
+ + + ESG ++ M K M
Sbjct: 275 LLDMYFKCKESGLAKRAFDAMKKKDM 300
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 282/506 (55%), Gaps = 45/506 (8%)
Query: 1 MIVRGLDQNNHLLSRFID-SCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLN 59
+IV G ++ LL++ I +CS+ + Y + +F PD +L+N+ IK+ + PL+
Sbjct: 32 LIVTGYGRSRSLLTKLITLACSARAIA-YTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLH 90
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
V Y ++ +S + P NY+F V+K+ LS + +G+ +HC V +G D +V AAL+
Sbjct: 91 CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVT 150
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
Y+ C GD+ AR +F+ M EK++++W
Sbjct: 151 FYSKC---------------------------------GDMEGARQVFDRMPEKSIVAWN 177
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+L++G+ Q +EAI +F +M+ +PD ++ LSACAQ GAV LG W+H YI
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299
GL+ V L ALI++Y++ G +GKA +VF+ MK +V WT MI+ HG G++A+++F
Sbjct: 238 GLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 300 SRME-RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
++ME PN +TF+A+LSAC H GLVE GR + M Y + P +E + CM+D+LG
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLG 357
Query: 359 RAGYLQEAEKLLRRMPFEANA---AIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
RAG+L EA K + ++ A A+W ++L A ++ + +LG + LI LEP N G+
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGH 417
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRL 475
+ +LSNIYA+ G+ +E IR M ++K G S IEV + + F GD SH + +
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEI 477
Query: 476 YQIL------CKINGQMKFAEHLQNE 495
Y+ L CK G +E + ++
Sbjct: 478 YRYLETLISRCKEIGYAPVSEEVMHQ 503
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 331 bits (849), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 271/470 (57%), Gaps = 7/470 (1%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
M +R L N+++S ++ S G A +F + DV +NT + Q N A
Sbjct: 108 MHLRNLYSWNNMVSGYVKS----GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ Y + + S ++ + +SF +L A VK ++L R+ H Q + G S+V + ++I
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A++ FDE++++ ++ +W T+++GYAK+GD+ A LF M EKN +SWT
Sbjct: 224 YAKCGQMESAKRCFDEMTVK--DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYG 240
LIAGY + N A+ LFR+M VKP++ + L A A + ++ G+ IH Y+ +
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 241 LNTIVPLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHGLGREALDMF 299
+ + ++LIDMY+KSG + + +VF +K + W TMI+ LA HGLG +AL M
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 300 SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGR 359
M + RV+PN T + IL+AC H GLVE G R+F M ++GI P E Y C+IDLLGR
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 360 AGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAIL 419
AG +E + + MPFE + IW ++L I+G+ ELG+ A LIKL+P +S Y +L
Sbjct: 462 AGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILL 521
Query: 420 SNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSH 469
S+IYA G+W K+R VM+ V K S+IE+ K+V F D SH
Sbjct: 522 SSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 159/385 (41%), Gaps = 74/385 (19%)
Query: 106 GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVW---NVAVWNTMVAGYAKVGDLNN 162
G+ ++A+L+Q K + + + L + + N + N ++ Y K G +
Sbjct: 41 GIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPID 100
Query: 163 ARALFELMTEKNVISWTTLIA-------------------------------GYAQMDQP 191
A +F+ M +N+ SW +++ GYAQ
Sbjct: 101 ACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNL 160
Query: 192 NEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNAL 251
+EA+ ++ + +K +E + L+AC + ++L H + G + V L+ ++
Sbjct: 161 HEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSI 220
Query: 252 IDMYAKSGKIGKALQVFENMKNKSV-------------------------------ITWT 280
ID YAK G++ A + F+ M K + ++WT
Sbjct: 221 IDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWT 280
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
+IAG G G ALD+F +M VKP + TF + L A + + G+ M R
Sbjct: 281 ALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IR 339
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGEC 400
+ P +ID+ ++G L+ +E++ R + + W ++++A +G LG
Sbjct: 340 TNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHK 396
Query: 401 ALQHL-----IKLEPHNSGNYAILS 420
AL+ L +++P+ + IL+
Sbjct: 397 ALRMLDDMIKFRVQPNRTTLVVILN 421
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 133/301 (44%), Gaps = 43/301 (14%)
Query: 180 TLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239
+ ++ +A + ++A++ + + ++ + + L C +++ G+WIH +++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 240 GL---NTIVPLNNALIDMYAKSGK-------------------------------IGKAL 265
G NT+ L+N LI MY K GK + +A
Sbjct: 76 GFKRPNTL--LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRAR 133
Query: 266 QVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVG 325
VF++M + V++W TM+ G A G EAL + R+ +K NE +F +L+AC
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 326 LVELGRR-YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGS 384
++L R+ + ++ + G + +ID + G ++ A++ M + + IW +
Sbjct: 194 QLQLNRQAHGQVLVA--GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTT 250
Query: 385 LLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGV 444
L++ GD+E E + ++ N ++ L Y G N + + + M +GV
Sbjct: 251 LISGYAKLGDMEAAE---KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 445 K 445
K
Sbjct: 308 K 308
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 267/492 (54%), Gaps = 35/492 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
GLD + + + I SS G D+A +F DV + I + + A++ +
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG-LDSDVHVVAALIQMYAS 123
+++ + + + + VLKA K+ + GR +H + TG + DV + ++L+ MY
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C C DA+KVFDE+ R NV W ++AGY + +R
Sbjct: 253 CSCYDDAQKVFDEMPSR--NVVTWTALIAGYVQ------SRCF----------------- 287
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
++ + +F M +V P+E + + LSACA +GA+ G +H Y+ + +
Sbjct: 288 --------DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
LID+Y K G + +A+ VFE + K+V TWT MI G A HG R+A D+F M
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ V PNE+TF+A+LSAC H GLVE GRR F MK R+ +EPK + Y CM+DL GR G L
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA+ L+ RMP E +WG+L + ++ D ELG+ A +IKL+P +SG Y +L+N+Y
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLY 519
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP-DFDRLYQILCKI 482
+ W+E ++RK M+D V K PG S+IEV ++ EF+A D P + D LY+ L +
Sbjct: 520 SESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Query: 483 NGQMKFAEHLQN 494
QM+ + L++
Sbjct: 580 GVQMRLPDELED 591
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 170/386 (44%), Gaps = 40/386 (10%)
Query: 12 LLSRFIDSCSSLGFS-DYAYSIFTHKSKPDVYLYNTTIKALCQ--TDNPLNAVILYNKIQ 68
LSR + C + YA + + L+++ I T N + + Y ++
Sbjct: 37 FLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMR 96
Query: 69 ASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIY 128
+ + P ++FP +LKAV KL + H V GLDSD V +LI Y+S
Sbjct: 97 RNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFD 155
Query: 129 DARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQM 188
A ++FD + +V W M+ G+ + G
Sbjct: 156 FASRLFDGAEDK--DVVTWTAMIDGFVRNG------------------------------ 183
Query: 189 DQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHN-YIEQYGLNTIVPL 247
+EA+ F M+ V +E+ +++ L A ++ V G +H Y+E + V +
Sbjct: 184 -SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 248 NNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARV 307
++L+DMY K A +VF+ M +++V+TWT +IAG + + +F M ++ V
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 308 KPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAE 367
PNE T ++LSAC HVG + GRR M + IE +IDL + G L+EA
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 368 KLLRRMPFEANAAIWGSLLAASNIYG 393
+ R+ E N W +++ +G
Sbjct: 362 LVFERL-HEKNVYTWTAMINGFAAHG 386
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 283/533 (53%), Gaps = 72/533 (13%)
Query: 26 SDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKA 85
+ Y+Y +F+H P+++LYN+ I + L+ I+ L ++FP VLKA
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 86 VVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVA 145
+ S+ +LG ++H V G + DV + +L+ +Y+ + DA K+FDE+ R +V
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR--SVV 178
Query: 146 VWNTMVAGYA-----------------------------------KVGDLNNARALFELM 170
W + +GY VGDL++ + + M
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 171 TE----KNVISWTTLIAGYAQMDQPNEA-------------------------------I 195
E KN TTL+ YA+ + +A I
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 196 TLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMY 255
LF +M EN+KPD+ +++ LS+CA LGA++LGEW + I+++ T + + NALIDMY
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358
Query: 256 AKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFI 315
AK G + + +VF+ MK K ++ I+GLA +G + + +F + E+ + P+ TF+
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 316 AILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPF 375
+L C H GL++ G R+FN + Y ++ +E YGCM+DL GRAG L +A +L+ MP
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478
Query: 376 EANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKI 435
NA +WG+LL+ + D +L E L+ LI LEP N+GNY LSNIY++ GRW+E+ ++
Sbjct: 479 RPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEV 538
Query: 436 RKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKF 488
R +M G+KK+PG S+IE+ +VHEF+A D SHP D++Y L + +M+
Sbjct: 539 RDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 325 bits (832), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 265/449 (59%), Gaps = 6/449 (1%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIE--LGREIHCQ 101
+ + I L + A ++ + + + P++ +F +L ++ LG +H
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 102 TVGTGLDSD-VHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDL 160
GLD + V V A+I MY+ AR VFD + + N WNTM+ GY + G +
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK--NSVTWNTMIDGYMRSGQV 156
Query: 161 NNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSAC 220
+NA +F+ M E+++ISWT +I G+ + EA+ FR MQ+ VKPD +A++AAL+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 221 AQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWT 280
LGA+ G W+H Y+ V ++N+LID+Y + G + A QVF NM+ ++V++W
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 281 TMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSR 340
++I G A +G E+L F +M+ KP+ +TF L+AC HVGLVE G RYF IMK
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 341 YGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG-DVELGE 399
Y I P+IE YGC++DL RAG L++A KL++ MP + N + GSLLAA + +G ++ L E
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 400 CALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRV 459
++HL L + NY ILSN+YA G+W + K+R+ M+ +G+KK PG S IE+ +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 460 HEFVAGDTSHPDFDRLYQILCKINGQMKF 488
H F+AGD +H + + ++L I+ ++
Sbjct: 457 HVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 35/286 (12%)
Query: 7 DQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNK 66
D+N+ + ID G D A +F + D+ + I + A++ + +
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 67 IQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKC 126
+Q S ++PD + L A L + G +H + ++V V +LI +Y C C
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 127 IYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYA 186
+ AR+VF + R V WN+++ G+A G+
Sbjct: 257 VEFARQVFYNMEKRT--VVSWNSVIVGFAANGN--------------------------- 287
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIE-QYGLNTIV 245
+E++ FR+MQ + KPD + AL+AC+ +G VE G ++ Y ++ +
Sbjct: 288 ----AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRI 343
Query: 246 PLNNALIDMYAKSGKIGKALQVFENMKNK-SVITWTTMIAGLALHG 290
L+D+Y+++G++ AL++ ++M K + + +++A + HG
Sbjct: 344 EHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 171 TEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQL--GAVEL 228
T + +SWT+ I + + EA F M + V+P+ I +A LS C G+ L
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 229 GEWIHNYIEQYGLN--------TIVPLN------------------------NALIDMYA 256
G+ +H Y + GL+ I+ + N +ID Y
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 257 KSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIA 316
+SG++ A ++F+ M + +I+WT MI G G EAL F M+ + VKP+ + IA
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 317 ILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFE 376
L+AC ++G + G + S+ + + +IDL R G ++ A ++ M +
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQ-DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-K 269
Query: 377 ANAAIWGSLLAA 388
W S++
Sbjct: 270 RTVVSWNSVIVG 281
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 34/155 (21%)
Query: 265 LQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSAC--- 321
+Q +++ ++WT+ I L +G EA FS M A V+PN ITFIA+LS C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 322 ---------------CHVGL----VELGRRYFNIMKSR-----------YGIEPKIEQYG 351
C +GL V +G + R Y + +
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
MID R+G + A K+ +MP E + W +++
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAMI 178
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/491 (37%), Positives = 271/491 (55%), Gaps = 53/491 (10%)
Query: 22 SLGFSD--YAYSIFTHKSKPDVYLYNTTIKALCQTD--NPLNAVILYNK-IQASALRPDN 76
S FSD YA+ +F +++NT I+A C D A +LY K ++ PD
Sbjct: 93 SSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESSPDK 151
Query: 77 YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDE 136
++FPFVLKA + G+++HCQ V G DV+V LI +Y SC C+ ARKVFDE
Sbjct: 152 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 211
Query: 137 LSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT 196
+ R ++ WN+M+ + G+ ++ A+
Sbjct: 212 MPER--SLVSWNSMIDALVRFGEYDS-------------------------------ALQ 238
Query: 197 LFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ---YGLNTIVPLNNALID 253
LFR MQ + +PD M + LSACA LG++ LG W H ++ + + V + N+LI+
Sbjct: 239 LFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 254 MYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM--ERARVKPNE 311
MY K G + A QVF+ M+ + + +W MI G A HG EA++ F RM +R V+PN
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 312 ITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLR 371
+TF+ +L AC H G V GR+YF++M Y IEP +E YGC++DL+ RAGY+ EA ++
Sbjct: 358 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 372 RMPFEANAAIWGSLLAASNIYG-DVELGECALQHLIKLEPHN-------SGNYAILSNIY 423
MP + +A IW SLL A G VEL E +++I + N SG Y +LS +Y
Sbjct: 418 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 477
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A RWN+ G +RK+M + G++K PGCS IE++ HEF AGDTSHP ++YQ L I+
Sbjct: 478 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 537
Query: 484 GQMKFAEHLQN 494
+++ +L +
Sbjct: 538 DRLRSIGYLPD 548
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 277/497 (55%), Gaps = 4/497 (0%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G++ N+ ++S +D D A +F ++ L N + A+ ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
N + S +RPD S + + +L I G+ H + G +S ++ ALI MY C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
A ++FD +S + V WN++VAGY + G+++ A FE M EKN++SW T+I+G
Sbjct: 386 HRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 185 YAQMDQPNEAITLFRRMQV-ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
Q EAI +F MQ E V D + M++ SAC LGA++L +WI+ YIE+ G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
V L L+DM+++ G A+ +F ++ N+ V WT I +A+ G A+++F M
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+KP+ + F+ L+AC H GLV+ G+ F M +G+ P+ YGCM+DLLGRAG L
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 364 QEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIY 423
+EA +L+ MP E N IW SLLAA + G+VE+ A + + L P +G+Y +LSN+Y
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 683
Query: 424 AILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKIN 483
A GRWN+ K+R M++ G++K PG S I++ + HEF +GD SHP+ + +L +++
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Query: 484 GQMKFAEHLQNEFSGVL 500
+ H+ + S VL
Sbjct: 744 QRASHLGHVP-DLSNVL 759
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 192/401 (47%), Gaps = 45/401 (11%)
Query: 4 RGLDQNNHLLSRFIDSCSSLGFSD---YAYSIFTH-KSKPDVYLYNTTIKALCQTDNPLN 59
+GLD + +++ + LG + +A +F + +S ++YN+ I+ +
Sbjct: 58 QGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNE 117
Query: 60 AVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQ 119
A++L+ ++ S + PD Y+FPF L A K G +IH V G D+ V
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV------ 171
Query: 120 MYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWT 179
N++V YA+ G+L++AR +F+ M+E+NV+SWT
Sbjct: 172 ---------------------------QNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 180 TLIAGYAQMDQPNEAITLFRRM-QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
++I GYA+ D +A+ LF RM + E V P+ + M+ +SACA+L +E GE ++ +I
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
G+ + +AL+DMY K I A ++F+ ++ M + GL REAL +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F+ M + V+P+ I+ ++ +S+C + + G+ + R G E +ID+
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL-RNGFESWDNICNALIDMYM 383
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGE 399
+ A ++ RM W S++A G VE GE
Sbjct: 384 KCHRQDTAFRIFDRMS-NKTVVTWNSIVA-----GYVENGE 418
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 321 bits (822), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 294/557 (52%), Gaps = 71/557 (12%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
++V GL + L+++ I + SS G +A +F +P ++ +N I+ + ++ +A
Sbjct: 44 LLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDA 103
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+++Y+ +Q + + PD+++FP +LKA LS +++GR +H Q G D+DV V LI +
Sbjct: 104 LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL 163
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV-ISWT 179
YA C+ + AR VF+ L L + W +V+ YA+ G+ A +F M + +V W
Sbjct: 164 YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWV 223
Query: 180 TLIA--------------------------------------GYAQMDQPNEAITLFRRM 201
L++ YA+ Q A LF +M
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 202 QVEN-------------------------------VKPDEIAMLAALSACAQLGAVELGE 230
+ N V+PD I++ +A+SACAQ+G++E
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 231 WIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHG 290
++ Y+ + V +++ALIDM+AK G + A VF+ ++ V+ W+ MI G LHG
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 291 LGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY 350
REA+ ++ MER V PN++TF+ +L AC H G+V G +FN M + + I P+ + Y
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHY 462
Query: 351 GCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEP 410
C+IDLLGRAG+L +A ++++ MP + +WG+LL+A + VELGE A Q L ++P
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 411 HNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHP 470
N+G+Y LSN+YA W+ ++R M++ G+ K GCS++EV R+ F GD SHP
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 471 DFDRLYQILCKINGQMK 487
++ + + + I ++K
Sbjct: 583 RYEEIERQVEWIESRLK 599
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 157/371 (42%), Gaps = 78/371 (21%)
Query: 96 REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYA 155
++IH + + GL ++ LI +S I AR+VFD+L + WN ++ GY+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP--QIFPWNAIIRGYS 95
Query: 156 KVGDLNNA---------------------------------------RALFELMTEKNVI 176
+ +A +F L + +V
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 177 SWTTLIAGYAQMDQPNEAITLFR---------------------------------RMQV 203
LIA YA+ + A T+F +M+
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGK 263
+VKPD +A+++ L+A L ++ G IH + + GL L +L MYAK G++
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 264 ALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCH 323
A +F+ MK+ ++I W MI+G A +G REA+DMF M V+P+ I+ + +SAC
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 324 VGLVELGRRYFN-IMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIW 382
VG +E R + + +S Y + I +ID+ + G ++ A + R + + +W
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGARLVFDRT-LDRDVVVW 392
Query: 383 GSLLAASNIYG 393
+++ ++G
Sbjct: 393 SAMIVGYGLHG 403
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 278/493 (56%), Gaps = 39/493 (7%)
Query: 2 IVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAV 61
++R D +H LSR S +Y+ +F+ + P + NT I+A + P
Sbjct: 39 LIRNSDVFHHFLSRLALSLIPRDI-NYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGF 97
Query: 62 ILYNKIQASALRPDN-YSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
L+ ++ ++ P N S F LK +K + G +IH + G SD ++ L+ +
Sbjct: 98 RLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDL 157
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
Y++C+ DA KVFDE+ +++ +SW
Sbjct: 158 YSTCENSTDACKVFDEIP---------------------------------KRDTVSWNV 184
Query: 181 LIAGYAQMDQPNEAITLFRRMQVE---NVKPDEIAMLAALSACAQLGAVELGEWIHNYIE 237
L + Y + + + + LF +M+ + VKPD + L AL ACA LGA++ G+ +H++I+
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 238 QYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALD 297
+ GL+ + L+N L+ MY++ G + KA QVF M+ ++V++WT +I+GLA++G G+EA++
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIE 304
Query: 298 MFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKS-RYGIEPKIEQYGCMIDL 356
F+ M + + P E T +LSAC H GLV G +F+ M+S + I+P + YGC++DL
Sbjct: 305 AFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDL 364
Query: 357 LGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNY 416
LGRA L +A L++ M + ++ IW +LL A ++GDVELGE + HLI+L+ +G+Y
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY 424
Query: 417 AILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLY 476
+L N Y+ +G+W + ++R +M++ + PGCS IE+ VHEF+ D SHP + +Y
Sbjct: 425 VLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY 484
Query: 477 QILCKINGQMKFA 489
++L +IN Q+K A
Sbjct: 485 KMLAEINQQLKIA 497
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 275/489 (56%), Gaps = 39/489 (7%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G DQ+ L ++ I S LG DYA +F K +Y++N +AL + + LY
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 65 NKIQASALRPDNYSFPFVLKAVV----KLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
K+ + D +++ +VLKA V ++ + G+EIH G S V+++ L+ M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C+ A VF + +R NV W+ M+A YAK N +A
Sbjct: 227 YARFGCVDYASYVFGGMPVR--NVVSWSAMIACYAK-----NGKAF-------------- 265
Query: 181 LIAGYAQMDQPNEAITLFRRM--QVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQ 238
EA+ FR M + ++ P+ + M++ L ACA L A+E G+ IH YI +
Sbjct: 266 ------------EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 239 YGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDM 298
GL++I+P+ +AL+ MY + GK+ +VF+ M ++ V++W ++I+ +HG G++A+ +
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 299 FSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLG 358
F M P +TF+++L AC H GLVE G+R F M +GI+P+IE Y CM+DLLG
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 359 RAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAI 418
RA L EA K+++ M E +WGSLL + I+G+VEL E A + L LEP N+GNY +
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 419 LSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQI 478
L++IYA W+E +++K++ G++K+PG ++EV ++++ FV+ D +P ++++
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553
Query: 479 LCKINGQMK 487
L K+ MK
Sbjct: 554 LVKLAEDMK 562
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 10/216 (4%)
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
IS LI + + +AI + + + + E+ +L C ++ +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILC----CGHRSSLSDALRVHRH 102
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I G + L LI MY+ G + A +VF+ + +++ W + L L G G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 296 LDMFSRMERARVKPNEITFIAILSAC----CHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
L ++ +M R V+ + T+ +L AC C V + G+ + +R G +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE-IHAHLTRRGYSSHVYIMT 221
Query: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
++D+ R G + A + MP N W +++A
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 252/445 (56%), Gaps = 34/445 (7%)
Query: 28 YAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVV 87
YA+SI P+ + +N+ I+A + P A+ ++ ++ + PD YSF FVLKA
Sbjct: 92 YAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA 151
Query: 88 KLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVW 147
E GR+IH + +GL +DV V L+ +Y ARKV D + +R + W
Sbjct: 152 AFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR--DAVSW 209
Query: 148 NTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENV- 206
N++++ Y + G ++ ARALF+ M E+NV SW +I+GYA EA +F M V +V
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV 269
Query: 207 -------------------------------KPDEIAMLAALSACAQLGAVELGEWIHNY 235
KPD +++ LSACA LG++ GEW+H Y
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVY 329
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I+++G+ L AL+DMY+K GKI KAL+VF + V TW ++I+ L++HGLG++A
Sbjct: 330 IDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDA 389
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L++FS M KPN ITFI +LSAC HVG+++ R+ F +M S Y +EP IE YGCM+D
Sbjct: 390 LEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVD 449
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLGR G ++EAE+L+ +P + + + SLL A +G +E E L++L +S
Sbjct: 450 LLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSG 509
Query: 416 YAILSNIYAILGRWNESGKIRKVMR 440
YA +SN+YA GRW + R+ MR
Sbjct: 510 YAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 277 ITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNI 336
T ++I A AL +F M V P++ +F +L AC E GR+ +
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 337 MKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVE 396
+ G+ + ++++ GR+GY + A K+L RMP +A W SLL+A Y +
Sbjct: 166 F-IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA---YLEKG 220
Query: 397 LGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM--------- 447
L + A ++E N ++ + + YA G E+ ++V M V+ +
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEA---KEVFDSMPVRDVVSWNAMVTA 277
Query: 448 ---PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQIL 479
GC Y EV + ++ + T PD L +L
Sbjct: 278 YAHVGC-YNEVLEVFNKMLDDSTEKPDGFTLVSVL 311
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 318 bits (816), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 272/486 (55%), Gaps = 5/486 (1%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTD-NPLNAVIL 63
G+ Q L + ++ G + +A +F D + + + AL Q + + +
Sbjct: 33 GIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVF 92
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
+ +S LRPD++ F ++KA L +I+ GR++HC + + +D V ++L+ MYA
Sbjct: 93 SSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAK 152
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
C + A+ VFD S+RV N W MV+GYAK G A LF ++ KN+ SWT LI+
Sbjct: 153 CGLLNSAKAVFD--SIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALIS 210
Query: 184 GYAQMDQPNEAITLFRRMQVENVKP-DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLN 242
G+ Q + EA ++F M+ E V D + + + + ACA L A G +H + G +
Sbjct: 211 GFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD 270
Query: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM 302
+ V ++NALIDMYAK + A +F M+++ V++WT++I G+A HG +AL ++ M
Sbjct: 271 SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM 330
Query: 303 ERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGY 362
VKPNE+TF+ ++ AC HVG VE GR F M YGI P ++ Y C++DLLGR+G
Sbjct: 331 VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGL 390
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLI-KLEPHNSGNYAILSN 421
L EAE L+ MPF + W +LL+A G ++G HL+ + + Y +LSN
Sbjct: 391 LDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSN 450
Query: 422 IYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCK 481
IYA W + + R+ + +M V+K PG S +EV K F AG+TSHP + ++++L K
Sbjct: 451 IYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKK 510
Query: 482 INGQMK 487
+ +M+
Sbjct: 511 LEEEMR 516
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 214 LAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKN 273
L L CA+ + + +H +I + G+ PL N L+++Y K G ALQVF+ M +
Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 274 KSVITWTTMIAGLALHGL-GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRR 332
+ I W +++ L L G+ S + ++P++ F A++ AC ++G ++ GR+
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 333 -YFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAA 388
+ + + S Y + ++ ++D+ + G L A+ + + + N W ++++
Sbjct: 127 VHCHFIVSEYANDEVVKS--SLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG 180
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I G D + + ID + A IF+ DV + + I + Q A
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 98
+ LY+ + + ++P+ +F ++ A + +E GRE+
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 361
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 255/487 (52%), Gaps = 68/487 (13%)
Query: 32 IFTHKSKPDVYLYNTTIKALCQTDNPLNAV-ILYNKIQASALRPDNYSFPFVLKAVVKLS 90
+F P YL+N IK V IL ++ RPD Y+FP V+K
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 91 TIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR---VW----- 142
+ +G +H + G D DV V + + Y CK ++ ARKVF E+ R W
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 143 ---------------------NVAVWNTMVAGYAKVGDLNNARALFELMTEKNVIS---- 177
N+ WN +V G K GDL NA+ LF+ M ++++IS
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 178 ---------------------------WTTLIAGYAQMDQPNEAITLFRRMQVENVKPDE 210
W+ LI GYAQ QPNEA +F M +NVKPDE
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 211 IAMLAALSACAQLGAVELGEWIHNYIEQ----YGLNTIVPLNNALIDMYAKSGKIGKALQ 266
M+ +SAC+Q+G EL E + +Y+ Q + + +VP ALIDM AK G + +A +
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP---ALIDMNAKCGHMDRAAK 361
Query: 267 VFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGL 326
+FE M + ++++ +M+ G+A+HG G EA+ +F +M + P+E+ F IL C L
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 327 VELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLL 386
VE G RYF +M+ +Y I + Y C+++LL R G L+EA +L++ MPFEA+A+ WGSLL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 387 AASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKK 446
+++G+ E+ E +HL +LEP ++G+Y +LSNIYA L RW + +R M + G+ K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 447 MPGCSYI 453
+ G S+I
Sbjct: 542 ICGRSWI 548
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 45/291 (15%)
Query: 83 LKAVVKLSTIELG-REIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRV 141
L+ + KL E+ +IH + + GL+ D ++++ I +
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSS------------------- 53
Query: 142 WNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAIT-LFRR 200
+ L+ + ++FE + W LI GY+ E ++ L R
Sbjct: 54 -------------SSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRM 100
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M+ +PDE + C+ G V +G +H + + G + V + + +D Y K
Sbjct: 101 MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKD 160
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILS 319
+ A +VF M ++ ++WT ++ G EA MF M ER N ++ A++
Sbjct: 161 LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER-----NLGSWNALVD 215
Query: 320 ACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLL 370
G + ++ F+ M R I Y MID + G + A L
Sbjct: 216 GLVKSGDLVNAKKLFDEMPKR-----DIISYTSMIDGYAKGGDMVSARDLF 261
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 315 bits (808), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 267/484 (55%), Gaps = 39/484 (8%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILY 64
G + N LL++ +++ +G YA +F KP ++L+NT K + P +++LY
Sbjct: 38 GFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLY 97
Query: 65 NKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASC 124
K++ +RPD +++PFV+KA+ +L G +H V G V L+ MY
Sbjct: 98 KKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYM-- 155
Query: 125 KCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAG 184
K G+L++A LFE M K++++W +A
Sbjct: 156 -------------------------------KFGELSSAEFLFESMQVKDLVAWNAFLAV 184
Query: 185 YAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTI 244
Q A+ F +M + V+ D +++ LSAC QLG++E+GE I++ + ++
Sbjct: 185 CVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCN 244
Query: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304
+ + NA +DM+ K G A +FE MK ++V++W+TMI G A++G REAL +F+ M+
Sbjct: 245 IIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQN 304
Query: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIM--KSRYGIEPKIEQYGCMIDLLGRAGY 362
++PN +TF+ +LSAC H GLV G+RYF++M + +EP+ E Y CM+DLLGR+G
Sbjct: 305 EGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGL 364
Query: 363 LQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGNYAILSNI 422
L+EA + +++MP E + IWG+LL A ++ D+ LG+ L++ P + +LSNI
Sbjct: 365 LEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNI 424
Query: 423 YAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPD----FDRLYQI 478
YA G+W+ K+R MR +G KK+ S +E ++H F GD SHP +++L +I
Sbjct: 425 YAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEI 484
Query: 479 LCKI 482
L KI
Sbjct: 485 LKKI 488
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 20/165 (12%)
Query: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
IH + + G + L L++ G + A QVF+ M + W T+ G + L
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQY- 350
E+L ++ +M V+P+E T+ ++ A +G G + + + +Y
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG----------FALHAHVVKYG 139
Query: 351 -GC-------MIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
GC ++ + + G L AE L M + A W + LA
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFLA 183
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 315 bits (807), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 270/469 (57%), Gaps = 34/469 (7%)
Query: 29 AYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVK 88
A +IF+ + DV ++ I ++++ ++ + + P+ + +L +
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 89 LSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWN 148
L ++LGRE+H + G D+ ++ A+I MYA C
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC------------------------ 489
Query: 149 TMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKP 208
G +N A +FE +++++++SW ++I AQ D P+ AI +FR+M V +
Sbjct: 490 ---------GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 209 DEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVF 268
D +++ AALSACA L + G+ IH ++ ++ L + V + LIDMYAK G + A+ VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 269 ENMKNKSVITWTTMIAGLALHGLGREALDMFSRM-ERARVKPNEITFIAILSACCHVGLV 327
+ MK K++++W ++IA HG +++L +F M E++ ++P++ITF+ I+S+CCHVG V
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 328 ELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLA 387
+ G R+F M YGI+P+ E Y C++DL GRAG L EA + ++ MPF +A +WG+LL
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 388 ASNIYGDVELGECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKM 447
A ++ +VEL E A L+ L+P NSG Y ++SN +A W K+R +M++ V+K+
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 448 PGCSYIEVSKRVHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEF 496
PG S+IE++KR H FV+GD +HP+ +Y +L + G+++ ++ +
Sbjct: 781 PGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPY 829
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 176/384 (45%), Gaps = 37/384 (9%)
Query: 5 GLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL- 63
G+D N + S I + G D +F + D ++N + + L++VI
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC-GALDSVIKG 226
Query: 64 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123
++ ++ + P+ +F VL I+LG ++H V +G+D
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD--------------- 271
Query: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183
+ ++ N++++ Y+K G ++A LF +M+ + ++W +I+
Sbjct: 272 ------------------FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNT 243
GY Q E++T F M V PD I + L + ++ +E + IH YI ++ ++
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 244 IVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRME 303
+ L +ALID Y K + A +F + V+ +T MI+G +GL ++L+MF +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 304 RARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYL 363
+ ++ PNEIT ++IL + ++LGR + + G + + +ID+ + G +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRM 492
Query: 364 QEAEKLLRRMPFEANAAIWGSLLA 387
A ++ R+ + + W S++
Sbjct: 493 NLAYEIFERLS-KRDIVSWNSMIT 515
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 1 MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60
+I +G D ++ ID + G + AY IF SK D+ +N+ I Q+DNP A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 61 VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120
+ ++ ++ S + D S L A L + G+ IH + L SDV+ + LI M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 121 YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180
YA C + A VF +++ N+ WN+++A G L ++ LF M EK+
Sbjct: 587 YAKCGNLKAAMNVFK--TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS------ 638
Query: 181 LIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELG-EWIHNYIEQY 239
++PD+I L +S+C +G V+ G + + E Y
Sbjct: 639 ------------------------GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 240 GLNTIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALH 289
G+ ++D++ ++G++ +A + ++M W T++ LH
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 44 YNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTV 103
+N+ I + + A+ Y K+ + PD +FP ++KA V L + G + TV
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTV 164
Query: 104 GT-GLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNN 162
+ G+D + V ++LI+ Y I K+FD + + + +WN M+ GYAK G L+
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK--DCVIWNVMLNGYAKCGALD- 221
Query: 163 ARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQ 222
++I G F M+++ + P+ + LS CA
Sbjct: 222 -----------------SVIKG-------------FSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 223 LGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTM 282
++LG +H + G++ + N+L+ MY+K G+ A ++F M +TW M
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 283 IAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
I+G GL E+L F M + V P+ ITF ++L +
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 130/308 (42%), Gaps = 33/308 (10%)
Query: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
+L+A + + G+++H + + D + ++ MYA C D K+F L LR
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
++ WN++++ + + G LN +A+ + +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLN-------------------------------QALAFYFK 128
Query: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGK 260
M V PD + AC L + +++ + + G++ + ++LI Y + GK
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 261 IGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSA 320
I ++F+ + K + W M+ G A G + FS M ++ PN +TF +LS
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 321 CCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAA 380
C L++LG + ++ G++ + ++ + + G +A KL R M A+
Sbjct: 249 CASKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTV 306
Query: 381 IWGSLLAA 388
W +++
Sbjct: 307 TWNCMISG 314
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 314 bits (805), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 272/493 (55%), Gaps = 47/493 (9%)
Query: 1 MIVRGLDQNNH-----LLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTD 55
+I R L N H L++ I+ + A+ +F + +V + T I A +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 56 NPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVA 115
A+ L + +RP+ Y++ VL++ +S + R +HC + GL+SDV V +
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRS 198
Query: 116 ALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNV 175
ALI ++A K+G+ +A ++F+ M +
Sbjct: 199 ALIDVFA---------------------------------KLGEPEDALSVFDEMVTGDA 225
Query: 176 ISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNY 235
I W ++I G+AQ + + A+ LF+RM+ ++ + + L AC L +ELG H +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 236 IEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREA 295
I +Y + I LNNAL+DMY K G + AL+VF MK + VITW+TMI+GLA +G +EA
Sbjct: 286 IVKYDQDLI--LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 296 LDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMID 355
L +F RM+ + KPN IT + +L AC H GL+E G YF MK YGI+P E YGCMID
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 356 LLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPHNSGN 415
LLG+AG L +A KLL M E +A W +LL A + ++ L E A + +I L+P ++G
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 416 YAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVAGDTSHPDF--- 472
Y +LSNIYA +W+ +IR MRD G+KK PGCS+IEV+K++H F+ GD SHP
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 473 -DRLYQILCKING 484
+L Q++ ++ G
Sbjct: 524 SKKLNQLIHRLTG 536
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 187 QMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVP 246
Q D P A+ +Q + D + C AV G I ++ G ++
Sbjct: 39 QRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 247 LNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERAR 306
L N LI+MY K + A Q+F+ M ++VI+WTTMI+ + + ++AL++ M R
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 307 VKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEA 366
V+PN T+ ++L +C G+ ++ + I+K G+E + +ID+ + G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDA 213
Query: 367 EKLLRRMPFEANAAIWGSLLA--ASNIYGDVEL 397
+ M +A +W S++ A N DV L
Sbjct: 214 LSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVAL 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,454,884
Number of Sequences: 539616
Number of extensions: 7089058
Number of successful extensions: 23795
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 16172
Number of HSP's gapped (non-prelim): 2336
length of query: 507
length of database: 191,569,459
effective HSP length: 122
effective length of query: 385
effective length of database: 125,736,307
effective search space: 48408478195
effective search space used: 48408478195
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)