BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010576
(507 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYB5|AMSH1_ARATH AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana GN=AMSH1
PE=2 SV=1
Length = 507
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/510 (65%), Positives = 393/510 (77%), Gaps = 6/510 (1%)
Query: 1 MRSSSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSS 60
M SS E I+IA SA+R+ VDNRI+L++Y+RIADNILKQA+IFR EKN+IDLYVMLLRFSS
Sbjct: 1 MGSSFETIDIATSARRIGVDNRISLKFYFRIADNILKQANIFRAEKNVIDLYVMLLRFSS 60
Query: 61 LVTETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWS 120
L ETIP HRDY S KS K YL+ +LL+ L+ELE+L+P VQQ+I+EL K + +
Sbjct: 61 LALETIPSHRDYRTSLKSNKEYLRMRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQA 120
Query: 121 HASQNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLN 180
H + N +L W S K + +YD K P Y GS QQ P++E+FR+MS+N
Sbjct: 121 HPA-NGSLGWSSAVKPSFNSYDHAKVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVN 179
Query: 181 FPRPNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIK 240
F RPN ETLS+HS+LGP GL WQPPK D V+YP+NID +P+ IPS +Q +S I
Sbjct: 180 F-RPNEETLSKHSILGPGGLSAQWQPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMI- 237
Query: 241 TDSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTE 300
T+ SN EPEK V+ N++I+ + TEE SMISFE E+ N ++IRQPSPPPVL E
Sbjct: 238 TNGSNDEPEKPIVEPSVASNEKIQKNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAE 297
Query: 301 VQDLIAAMSPQVTETECQVGNSLSDAFDRSE-PLQLHISTTMMDNFMKLAKSNTDKNLET 359
VQDL+ A+ P+V E EC + NSL D RSE PL+LHI+T+MMD FM+LAKSNT KNLET
Sbjct: 298 VQDLVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFMRLAKSNTKKNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDS--ATNEEEIFEVQDKRSLFPLGWIHTHPTQS 417
CGILAGSLKNRKFYITALIIPKQESTSDS ATNEEEIFEVQDK+SLFPLGWIHTHPTQS
Sbjct: 358 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQS 417
Query: 418 CFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPH 477
CFMSSIDVHTHYSYQIMLPE+VAIVMAPQD++R HGIFRLT+PGGM+VIR C +RGFH H
Sbjct: 418 CFMSSIDVHTHYSYQIMLPEAVAIVMAPQDSSRNHGIFRLTTPGGMTVIRNCDRRGFHAH 477
Query: 478 DPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 507
P DGGPIY C +VYMNPNLKFDVIDLR
Sbjct: 478 SSPEDGGPIYNTCKEVYMNPNLKFDVIDLR 507
>sp|Q5PNU3|AMSH3_ARATH AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana GN=AMSH3
PE=1 SV=2
Length = 507
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/510 (48%), Positives = 335/510 (65%), Gaps = 15/510 (2%)
Query: 8 INIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIP 67
I++ A+ ++VDNRI LR YYRIADN+L+QA I+REEKN++DLY+MLLR+SSL++ETIP
Sbjct: 3 IDLNKVAREIEVDNRIPLRNYYRIADNLLRQASIYREEKNVVDLYIMLLRYSSLISETIP 62
Query: 68 CHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSH----AS 123
HRDY AS ++L +K+L ++ELE L+P Q +++LNR + S +
Sbjct: 63 FHRDYQASLPQERLGSRKRLRAVINELESLKPEFNQLVDKLNRVEDESRQDGSDLPVVSY 122
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
+ +EWP K + + D+ K L Y ++ T+ +D+QF+++S +F
Sbjct: 123 SSDAVEWPPAHKASYSRPDINKPLPTSQPSWTYNNNLTSSSNRTQ-IDQQFQKLSFDFLP 181
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQ--PSESSIKIKT 241
PN TLSRHS LGPNGL PKS+ V+YP+N D + L + PS SS +
Sbjct: 182 PNQATLSRHSFLGPNGLKRQMVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSSSSASLNG 241
Query: 242 DSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEV 301
DS V S++ S+ + +D +E S + +E P ++QPSPPPVL +V
Sbjct: 242 DSQEV----STLNSVLSLDDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQV 297
Query: 302 QDLIAAMSP-QVTETECQVGNSLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLET 359
+A + P +V + + + S Q LH+ +MD+F++LA+SNT++NLET
Sbjct: 298 HQELAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDSAT--NEEEIFEVQDKRSLFPLGWIHTHPTQS 417
CG+LAGSLKNR F+IT LIIPKQESTSDS NEEEIFEVQD+ SLFPLGWIHTHPTQ+
Sbjct: 358 CGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQT 417
Query: 418 CFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPH 477
CFMSS+D+HTHYSYQIMLPE+VAIVMAP D + HGIF L+ P G+SVIR CQQRGFHPH
Sbjct: 418 CFMSSVDLHTHYSYQIMLPEAVAIVMAPTDESTPHGIFHLSDPSGVSVIRNCQQRGFHPH 477
Query: 478 DPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 507
+ DG PIY+ C+ V++N LK++V+DLR
Sbjct: 478 EESEDGNPIYEHCSHVFLNAKLKYEVLDLR 507
>sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana GN=AMSH2
PE=2 SV=1
Length = 223
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 141/175 (80%), Gaps = 2/175 (1%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDS--ATNE 392
+HIS ++++F +LA+ NT+K+LETCG LA L+ FY+T LIIPKQESTS+S A NE
Sbjct: 49 VHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNE 108
Query: 393 EEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH 452
E+F +Q++R L+P+GWIHTHP+Q CFMSS+D+HTHYSYQ+M+PE+ AIV+AP D+++ +
Sbjct: 109 VEVFSIQNERELYPVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSY 168
Query: 453 GIFRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 507
GIF+LT PGGM V+R C + GFHPH P DG P+Y+ C++VY N NL+F++ DLR
Sbjct: 169 GIFKLTDPGGMEVLRGCSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR 223
>sp|Q9P371|SST2_SCHPO AMSH-like protease sst2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sst2 PE=1 SV=1
Length = 435
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/514 (31%), Positives = 239/514 (46%), Gaps = 112/514 (21%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPC- 68
IA+ A D + I L+ + R + I KQA ++ E + + +L R+ L + C
Sbjct: 16 IASRAGAFDFNKNIPLKNWLRTSTTISKQAHVYVSEHDYSNGVFLLFRYCELFMK---CQ 72
Query: 69 -HRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNST 127
H D A++K + + + NAL E+E ++P V+++ + + Q +
Sbjct: 73 KHPD-AAAYKKELFDYYQGVRNALEEIELIKPIVKEQYEQ-------------YQCQKND 118
Query: 128 LEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYT-RPVDEQFRRMSLNFPRPNA 186
L+ LKK ++ + Q S+ + ++Y P+ EQ+ L P
Sbjct: 119 LD--DLKKLSMKDS---------------QPSLEKPVSYVDEPILEQWALSDLQILPP-- 159
Query: 187 ETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNV 246
S LL P+ S KL K ++ DL + PSL + + SS
Sbjct: 160 ---SSTDLLSPD----------SQKLSK--SSSDLPQFDYPSLNSSPTFNSNLPISSSRF 204
Query: 247 EPEKSSVQSISTP---NDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLT-EVQ 302
E S + +P +D +I ++P I TSE P P P T ++
Sbjct: 205 EKTSLSDSKLVSPEPLDDNKDIQFIKKP---IYTRTSE----------PRPKPAGTFKIH 251
Query: 303 DLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGI 362
P T +++ + F+ + K NT KNLETCGI
Sbjct: 252 AYTEGGKPLRT---------------------IYLPKLLKKVFLDVVKPNTKKNLETCGI 290
Query: 363 LAGSLKNRKFYITALIIPKQESTSDSA--TNEEEIFEVQDKRSLFPLGWIHTHPTQSCFM 420
L G L+ F+IT L+IP QE+TSD+ T+E +FE QDK +L LGWIHTHPTQ+CFM
Sbjct: 291 LCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIHTHPTQTCFM 350
Query: 421 SSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRG-FHPHDP 479
SS+D+HTH SYQ+MLPE++AIVMAP T GIFRL P G+ I +C++ G FHPH+
Sbjct: 351 SSVDLHTHCSYQLMLPEAIAIVMAPSKNTS--GIFRLLDPEGLQTIVKCRKPGLFHPHE- 407
Query: 480 PPDGGPIYKPCTDVYMNP------NLKFDVIDLR 507
G +Y + P N K V+DLR
Sbjct: 408 ----GKVYT----MVAQPGHVREINSKLQVVDLR 433
>sp|Q54Q40|D1039_DICDI Probable ubiquitin thioesterase DG1039 OS=Dictyostelium discoideum
GN=DG1039 PE=3 SV=1
Length = 715
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 132/207 (63%), Gaps = 7/207 (3%)
Query: 306 AAMSPQVTETECQVGNSLSDAFDRSEPL-QLHISTTMMDNFMKLAKSNTDKNLETCGILA 364
A +P +T T + S+A + L ++ + + FM+LA++NT +++ETCGIL+
Sbjct: 507 AVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILS 566
Query: 365 GSLKNRKFYITALIIPKQESTSDSATN--EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSS 422
G+L N F IT +IIPKQE T+D+ E EIFE Q + L LGWIHTHPTQ CF+S+
Sbjct: 567 GTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHTHPTQDCFLSA 626
Query: 423 IDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPPD 482
+DVHTH SYQ +L E++A+V++P A GIFRLT P G+ +++C+ + FHPH PP +
Sbjct: 627 VDVHTHCSYQYLLQEAIAVVISPM-ANPNFGIFRLTDPPGLETVQKCKLKSFHPH-PPVN 684
Query: 483 GGPIYKPCTDVYMNPNLKFD--VIDLR 507
G PIY V + K D V+DLR
Sbjct: 685 GIPIYTKVDHVDLIWGKKSDSKVVDLR 711
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCH 69
+ + ++VD ++ +Y +N++KQADI++ E +I Y+ LRF L+ E + H
Sbjct: 17 VKKHVEGVEVDKNYSIFHYLSTCNNLVKQADIYKSEGDIERTYIYSLRFCILIFEKLQKH 76
Query: 70 RDY-LASFKSQKLYLKKKLLNALSELEELQPAVQQ 103
D+ SF + +K+K L ELE L+ +++
Sbjct: 77 PDFNKESFTKSRNEIKRKAELKLKELEGLKETLKK 111
>sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=1 SV=2
Length = 436
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 234/506 (46%), Gaps = 105/506 (20%)
Query: 4 SSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVT 63
S G NI S I R Y+R + + A ++ EE N+ + +V+ +F +L
Sbjct: 34 SKLGCNITISED-------ITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFV 86
Query: 64 ETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHAS 123
E +P HRDY A+ E ++ + +K+ E+ +T++
Sbjct: 87 EKLPNHRDYQQC--------------AVPEKQD----IMKKLKEIAFPRTDE-------- 120
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
LK L Y+V L S+ Y+ I ++L + R ++ + +R++
Sbjct: 121 ---------LKNDLLKKYNVEYQEYLQSKN-KYKAEILKKLEHQRLIEAERKRIA----- 165
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDS 243
Q +S++ + + + + + +R S + + D
Sbjct: 166 -----------------QMRQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDG 208
Query: 244 SNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQD 303
S + S S N + + ++P S T+ A +S V R +P L+ VQ+
Sbjct: 209 SAL-----SCFSTHQNNSLLNVF-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQN 260
Query: 304 LIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGIL 363
L+ V C V + + F++LA+SNT + +ETCGIL
Sbjct: 261 LV------VEGLRCVV-----------------LPEDLCHKFLQLAESNTVRGIETCGIL 297
Query: 364 AGSLKNRKFYITALIIPKQESTSDSA--TNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMS 421
G L + +F IT +I+PKQ + D N EE+F VQD+ L LGWIHTHPTQ+ F+S
Sbjct: 298 CGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLS 357
Query: 422 SIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPP 481
S+D+HTH SYQ+MLPE++AIV +P+ + GIFRLT+ GM + C+++GFHPH P
Sbjct: 358 SVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGIFRLTN-AGMLEVSACKKKGFHPHTKEP 414
Query: 482 DGGPIYKPCTDVYMNPNLKFDVIDLR 507
++ C V + ++K V+DLR
Sbjct: 415 R---LFSICKHVLVK-DIKIIVLDLR 436
>sp|Q5R558|STALP_PONAB AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=2 SV=1
Length = 436
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 227/484 (46%), Gaps = 98/484 (20%)
Query: 26 RYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASFKSQKLYLKK 85
R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 49 RRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQC---------- 98
Query: 86 KLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNSTLEWPSLKKQTLTNYDVTK 145
A+ E ++ + +K+ E+ +T++ LK L Y+V
Sbjct: 99 ----AVPEKQD----IMKKLKEIAFPRTDE-----------------LKNDLLKKYNVEY 133
Query: 146 ALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPRPNAETLSRHSLLGPNGLYGHWQ 205
L S+ Y+ I ++L + R ++ + +R++ Q
Sbjct: 134 QEYLQSKN-QYKAEILKKLEHQRLIEAERKRIA----------------------QMRQQ 170
Query: 206 PPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNVEPEKSSVQSISTPNDEIEI 265
+S++ + + + + + +R S + + D S + S S N + +
Sbjct: 171 QLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDGSAL-----SCFSTHQNNSLLNV 225
Query: 266 HRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLSD 325
++P S T+ A +S V R +P L+ VQ+L+ V C V
Sbjct: 226 F-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQNLV------VEGLRCVV------ 270
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 385
+ + F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ +
Sbjct: 271 -----------LPKDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAG 319
Query: 386 SD--SATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVM 443
D N EE+F VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ML E++AIV
Sbjct: 320 PDYCDVENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLSEAIAIVC 379
Query: 444 APQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDV 503
+P+ + GIFRLT+ GM + C+++GFHPH P ++ C V + ++K V
Sbjct: 380 SPKH--KDTGIFRLTN-AGMLEVSACKKKGFHPHTKEPR---LFSICKHVLVK-DIKIIV 432
Query: 504 IDLR 507
+DLR
Sbjct: 433 LDLR 436
>sp|Q76N33|STALP_MOUSE AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=2 SV=1
Length = 436
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 115/173 (66%), Gaps = 9/173 (5%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD--SATNEEE 394
+S + F+ LA SNT + +ETCGIL G L + +F IT +++PKQ + D N EE
Sbjct: 271 LSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEE 330
Query: 395 IFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI 454
+F VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPE++AIV +P+ + GI
Sbjct: 331 LFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGI 388
Query: 455 FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 507
FRLT+ GM + C+++GFHPH P ++ C+ V + ++K V+DLR
Sbjct: 389 FRLTN-AGMLEVSTCKKKGFHPHTKDP---KLFSICSHVLVK-DIKTTVLDLR 436
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
+ ++ I R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 40 ISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCA 99
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKIN 106
+K + KKL A +EL+ + +K N
Sbjct: 100 VPEKQDIMKKLKEIAFPRTDELKTDLLRKYN 130
>sp|O95630|STABP_HUMAN STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1
Length = 424
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 107/151 (70%), Gaps = 8/151 (5%)
Query: 345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD--SATNEEEIFEVQDKR 402
F++LA +NT + +ETCGIL G L +F IT ++IPKQ + SD + NEEE+F +QD++
Sbjct: 267 FLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQ 326
Query: 403 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGG 462
L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPESVAIV +P+ ++ G F+LT G
Sbjct: 327 GLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSPK--FQETGFFKLTD-HG 383
Query: 463 MSVIRQCQQRGFHPHDPPPDGGPIYKPCTDV 493
+ I C+Q+GFHPH P P++ C+ V
Sbjct: 384 LEEISSCRQKGFHPHSKDP---PLFCSCSHV 411
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++V+ I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRDY
Sbjct: 25 VEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDY---- 80
Query: 77 KSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWS 120
KS + KK + L E+ P ++ EL ++ T + T ++
Sbjct: 81 KSAVIPEKKDTVKKLKEIA--FPKAEELKAELLKRYTKEYTEYN 122
>sp|Q6TH47|STBPA_DANRE STAM-binding protein-like A OS=Danio rerio GN=stambpa PE=2 SV=3
Length = 418
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 102/151 (67%), Gaps = 7/151 (4%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD--SATN 391
QL + + F+KLA++NT + +ETCGIL G L F +T +I+PKQ D N
Sbjct: 250 QLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTEN 309
Query: 392 EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 451
EEE+F +QD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ +
Sbjct: 310 EEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FNE 367
Query: 452 HGIFRLTSPGGMSVIRQCQQRGFHPH--DPP 480
G FRLT GM + C+QRGFHPH DPP
Sbjct: 368 TGYFRLTD-YGMDDVGTCKQRGFHPHPKDPP 397
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY-LAS 75
+DV + R Y+R I++ A+I+ +E N+ +++ ++ +L E +P HR+Y A+
Sbjct: 25 VDVSEDVPPRRYFRSGMEIIRMANIYADEGNVEHAFILYNKYITLFIEKLPKHREYKTAN 84
Query: 76 FKSQKLYLKKKLLNALSELEELQ 98
+K ++K A + EEL+
Sbjct: 85 IPEKKETMRKLKEIAFPKAEELK 107
>sp|Q8R424|STABP_RAT STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1
Length = 424
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 9/169 (5%)
Query: 341 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSA--TNEEEIFEV 398
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 399 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLT 458
QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 323 QDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLT 380
Query: 459 SPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 507
G+ I C+Q+GFHPH P P++ C+ V + + + DLR
Sbjct: 381 D-YGLQEISTCRQKGFHPHGRDP---PLFCDCSHVTVKDRI-VTITDLR 424
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++++ I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRDY ++
Sbjct: 25 VELNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAI 84
Query: 77 KSQKLYLKKKLLN-ALSELEELQ 98
+K KKL N A + EEL+
Sbjct: 85 IPEKKDAVKKLKNVAFPKAEELK 107
>sp|Q9CQ26|STABP_MOUSE STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1
Length = 424
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 9/169 (5%)
Query: 341 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSA--TNEEEIFEV 398
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 399 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLT 458
QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 323 QDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLT 380
Query: 459 SPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 507
G+ I C+Q+GFHPH P P++ C+ V + + + DLR
Sbjct: 381 D-YGLQEISTCRQKGFHPHGRDP---PLFCDCSHVTVKDRI-VTITDLR 424
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++++ I R YYR I++ A ++ EE NI +++ ++ +L E +P HRDY ++
Sbjct: 25 VELNEDIPPRRYYRSGVEIIRMASVYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAI 84
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKINELNRKKTNQ 115
+K KKL + A + EEL+ EL R+ T +
Sbjct: 85 IPEKKDAVKKLKSVAFPKAEELK-------TELLRRYTKE 117
>sp|Q63ZM7|STABP_XENLA STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1
Length = 416
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 103/141 (73%), Gaps = 7/141 (4%)
Query: 344 NFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD--SATNEEEIFEVQDK 401
F++L+++NT + +ETCGIL G L +F +T +I+PKQ D + +EEE+F +QD+
Sbjct: 258 KFLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQ 317
Query: 402 RSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPG 461
+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 318 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLTD-Y 374
Query: 462 GMSVIRQCQQRGFHPH--DPP 480
GM I +C+Q+GFHPH +PP
Sbjct: 375 GMKEIGECRQKGFHPHCKEPP 395
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
++V++ I + YYR +++ A+++ E +I + +++ ++ +L E +P HRDY
Sbjct: 25 VEVNDDIPPKRYYRSGVELIRMANVYSGEGSIENAFILYNKYITLFIEKLPKHRDY 80
>sp|Q86IJ1|PSDE_DICDI 26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium
discoideum GN=psmD14 PE=3 SV=1
Length = 306
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 319 VGNSLSDAF---DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYI 374
+G ++DA D +E + HIS+ + ++ A++ LE G++ G L + +
Sbjct: 14 LGEKITDATPLPDTAETI--HISSLALLKMLQHARAGVP--LEVMGLMLGELIDEYTIRV 69
Query: 375 TALIIPKQESTSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHT 427
+ Q TS S + +F+ Q R +GW H+HP C++SS+DV+T
Sbjct: 70 IDVFAMPQSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVNT 129
Query: 428 HYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDP 479
S++ + +VA+V+ P + R + FR + RQ H DP
Sbjct: 130 QQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPTAEPRQITSNLGHLQDP 184
>sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN11 PE=3 SV=1
Length = 311
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 357 LETCGILAGSLKNR-KFYITALIIPKQESTSDSATNEEEIFEV-------QDKRSLFPLG 408
+E G++ G + + + Q T S +++F+ Q R +G
Sbjct: 52 MEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVG 111
Query: 409 WIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGMSV 465
W H+HP C++SS+DV T S++ + +VA+V+ P + + + FRL SP +V
Sbjct: 112 WYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPA--TV 169
Query: 466 IRQCQQRGFHPHDPPPDGGPIYKP 489
+R + P + G + KP
Sbjct: 170 VRNQE-----PRQTTSNVGLLNKP 188
>sp|P43588|RPN11_YEAST 26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1
Length = 306
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 357 LETCGILAGS-LKNRKFYITALIIPKQESTSDSATNEEEIFEV-------QDKRSLFPLG 408
+E G++ G + + + + Q T S +++F+ Q R +G
Sbjct: 47 MEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVG 106
Query: 409 WIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 463
W H+HP C++SS+DV+T S++ + +VA+V+ P + + + FRL G +
Sbjct: 107 WYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN11 PE=3 SV=1
Length = 306
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 317 CQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYIT 375
+VG + ++ D E + +IS+ + +K ++ +E G++ G + +
Sbjct: 11 TKVGAADANKDDTKETV--YISSIALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVNVV 66
Query: 376 ALIIPKQESTSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTH 428
+ Q T S +++F+ Q R +GW H+HP C++SS+DV+T
Sbjct: 67 DVFAMPQSGTGVSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQ 126
Query: 429 YSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 463
S++ + +VA+V+ P + + + FRL G +
Sbjct: 127 KSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>sp|P41878|RPN11_SCHPO 26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2
Length = 308
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 399 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---F 455
Q R +GW H+HP C++SS+D++T S++ + P +VA+V+ P + + + F
Sbjct: 100 QTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAF 159
Query: 456 RLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 489
RL +P + + G P + G I KP
Sbjct: 160 RLINPSTLMM-------GQEPRQTTSNLGHINKP 186
>sp|Q9V3H2|PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila
melanogaster GN=Rpn11 PE=1 SV=1
Length = 308
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSATNE 392
Q++IS+ + +K ++ +E G++ G + + + + Q T S
Sbjct: 28 QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAV 85
Query: 393 EEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 445
+ +F+ Q R +GW H+HP C++S +D++T S++ + +VA+V+ P
Sbjct: 86 DPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 145
Query: 446 QDATRKHGI---FRLTSPGGMSVIRQ 468
+ + + FRL +P M V+ Q
Sbjct: 146 IQSVKGKVVIDAFRLINP-NMLVLGQ 170
>sp|P41883|YPT5_CAEEL Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans
GN=F37A4.5 PE=3 SV=1
Length = 319
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTS 386
D SE + +IS+ + ++ A+S LE G++ G + + +T + Q TS
Sbjct: 24 DTSETV--NISSLALLKMLRHARSGIP--LEVMGLMLGDFVDDYTINVTDVFAMPQSGTS 79
Query: 387 DSATNEEEIFEVQD-------KRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESV 439
+ + + +++ + R+ +GW H+HP C++SS+DV+T S++ + P +V
Sbjct: 80 VTVESVDPVYQTKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAV 139
Query: 440 AIVMAP 445
A+V+ P
Sbjct: 140 AVVVDP 145
>sp|O35593|PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus
GN=Psmd14 PE=1 SV=2
Length = 310
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 385 TSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 437
T S + +F+ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 438 SVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 489
+VA+V+ P + + + FRL + M + G P + G + KP
Sbjct: 140 AVAVVVDPIQSVKGKVVIDAFRLINANMMVL-------GHEPRQTTSNLGHLNKP 187
>sp|O00487|PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens
GN=PSMD14 PE=1 SV=1
Length = 310
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 385 TSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 437
T S + +F+ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 438 SVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 489
+VA+V+ P + + + FRL + M + G P + G + KP
Sbjct: 140 AVAVVVDPIQSVKGKVVIDAFRLINANMMVL-------GHEPRQTTSNLGHLNKP 187
>sp|O76577|PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis
elegans GN=rpn-11 PE=1 SV=1
Length = 312
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQ 382
S+ D SE + +IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 SNQVDTSETV--YISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVNVIDVFAMPQ 79
Query: 383 ESTSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 435
T S + +F+ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 SGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 139
Query: 436 PESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQ 471
+VA+V+ P + + + FR +P M++ ++ +Q
Sbjct: 140 DRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQ 178
>sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis
thaliana GN=RPN11 PE=2 SV=1
Length = 308
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITALIIPKQ 382
S D SE Q++IS+ + +K ++ +E G++ G + + + Q
Sbjct: 21 SPTLDTSE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVRVVDVFAMPQ 76
Query: 383 ESTSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 435
T S + +F+ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 77 SGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALN 136
Query: 436 PESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPC 490
+VA+V+ P + + + FR +P Q G P + G + KP
Sbjct: 137 QRAVAVVVDPIQSVKGKVVIDAFRSINP-------QTIMLGQEPRQTTSNLGHLNKPS 187
>sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rri-1 PE=1 SV=1
Length = 336
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 74/183 (40%), Gaps = 18/183 (9%)
Query: 294 PPPVLTEVQDLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNT 353
P P L +VQ A+ +E V NS D + IS+ M + A+S
Sbjct: 5 PNPGLVDVQR--DALYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSG- 61
Query: 354 DKNLETCGILAGSLKNRKFYITALIIPKQESTSDSATNEEEIFEV---------QDKRSL 404
NLE G++ G ++ IT E T ++E E ++ R
Sbjct: 62 -GNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLE 120
Query: 405 FPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSP 460
+GW H+HP C++S IDV T Q VA+V+ P ++ G FR T P
Sbjct: 121 NVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFR-TIP 179
Query: 461 GGM 463
G+
Sbjct: 180 EGI 182
>sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans
GN=csn-5 PE=1 SV=1
Length = 368
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 11/121 (9%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSATNEE 393
Q+ IS + AK NLE G+L G + F I + E T +
Sbjct: 55 QIKISAIALLKMTMHAKRGG--NLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQA 112
Query: 394 EIFEVQ---------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMA 444
+ +E + R +GW H+HP C++S IDV T Q VAIV+
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172
Query: 445 P 445
P
Sbjct: 173 P 173
>sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3
SV=1
Length = 340
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYIT-ALIIPKQES-T 385
D S + IS T + A+S NLE G++ G + F +T A +P + + T
Sbjct: 45 DPSHFKHVRISATALIKMTMHARSGG--NLEVMGLMQGYTQGDTFIVTDAFRLPVEGTET 102
Query: 386 SDSATNE--EEIFEVQD-----KRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPES 438
+A +E E I E D R +GW H+HP C++S IDV T Q
Sbjct: 103 RVNAQDEANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPF 162
Query: 439 VAIVMAP 445
+A+V+ P
Sbjct: 163 LAVVIDP 169
>sp|Q8SQY3|RPN11_ENCCU 26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN11 PE=1 SV=1
Length = 294
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITALIIPKQESTS 386
D SE +Q IS+ + +K ++ LE G++ G + + + Q T+
Sbjct: 16 DASETVQ--ISSLALLKMLKHGRAGIP--LEVMGLMLGEFVDEYTVKVVDVFAMPQSGTN 71
Query: 387 DSATNEEEIFEVQ-------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESV 439
+ + + IF+++ R +GW H+HP C++S++D+ T S++ + +V
Sbjct: 72 VTVESVDPIFQMEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAV 131
Query: 440 AIVMAPQDATRKHGI---FRL 457
A+V+ P + + + FRL
Sbjct: 132 AVVVDPIQSVKGKVVIDAFRL 152
>sp|P0CQ24|CSN5_CRYNJ COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRI1 PE=3 SV=1
Length = 371
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 329 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALI-IPKQES 384
R++P H IS + + A+S E GI+ G +++ F+I + +P Q +
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 385 -TSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 436
T +A NE + V + + GW H+HP C++S IDV+T + Q
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 437 ESVAIVMAPQDATRKH----GIFRLTSPGGMS 464
+A+V+ P G FR T P G +
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR-TYPEGYT 190
>sp|P0CQ25|CSN5_CRYNB COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1
Length = 371
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 329 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALI-IPKQES 384
R++P H IS + + A+S E GI+ G +++ F+I + +P Q +
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 385 -TSDSATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 436
T +A NE + V + + GW H+HP C++S IDV+T + Q
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 437 ESVAIVMAPQDATRKH----GIFRLTSPGGMS 464
+A+V+ P G FR T P G +
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR-TYPEGYT 190
>sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum
GN=csn5 PE=1 SV=1
Length = 332
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 14/140 (10%)
Query: 336 HISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSATNEEEI 395
H+ + + + + + LE G+L G ++N I E T + E
Sbjct: 53 HVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEA 112
Query: 396 FEV---------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 446
+E Q R LGW H+HP C++S IDV T Q + IV+ P
Sbjct: 113 YEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPT 172
Query: 447 DATRKH----GIFRLTSPGG 462
G FR T P G
Sbjct: 173 RTVSAGKVEIGAFR-TYPQG 191
>sp|Q4P804|CSN5_USTMA COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRI1 PE=3 SV=1
Length = 406
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 358 ETCGILAGSL--KNRKFYIT-ALIIPKQES-TSDSATNEEEIFEVQD-------KRSLFP 406
E G++ G + +NR Y+ + +P + + T +A NE + VQ R
Sbjct: 82 EIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENV 141
Query: 407 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 445
+GW H+HP C++S IDV+T + Q VAIV+ P
Sbjct: 142 VGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDP 180
>sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5
PE=3 SV=2
Length = 334
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSATNEEEIFEVQ---------DK 401
+ + +LE G++ G + F +T E T +EE E
Sbjct: 65 ARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAG 124
Query: 402 RSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 446
R +GW H+HP C++S IDV T Q+ P VA+V+ P+
Sbjct: 125 RMENAVGWYHSHPGYGCWLSGIDVTTQDMQQLGGP-FVAVVIDPE 168
>sp|Q3TV65|MPND_MOUSE MPN domain-containing protein OS=Mus musculus GN=Mpnd PE=2 SV=2
Length = 487
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 326 AFDRSEPLQLHISTT---MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITAL-IIPK 381
A ++ +P + +S+ ++D L +S E G L G +T L P
Sbjct: 249 AINKFQPFNVAVSSNVLFLLDFHCHLTRS------EVVGYLGGRWDINNQMLTVLRAFPC 302
Query: 382 QESTSD---SATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 435
+ D +AT EEEI++V R L +GW H+HP S D+ YQ+ L
Sbjct: 303 RSRLGDTDTAATVEEEIYQVLFLRGLSLVGWYHSHPHSPAVPSLQDIDAQMEYQLRL 359
>sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rri1 PE=1 SV=2
Length = 335
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYIT-ALIIPKQES----TSDSA 389
+ IS + + A+S +LE G++ G + F +T A +P + + +
Sbjct: 51 VRISAVALLKMVMHARSG--GSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDE 108
Query: 390 TNEEEIFEVQDKRSLF----PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 445
NE + +Q R +GW H+HP C++S IDV T Q+ P VA+V+ P
Sbjct: 109 ANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDMQQMSGP-FVAVVIDP 167
Query: 446 Q 446
+
Sbjct: 168 E 168
>sp|A6ZXB7|CSN5_YEAS7 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRI1 PE=3 SV=2
Length = 440
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 404 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 456
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|Q12468|CSN5_YEAST COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRI1 PE=1 SV=2
Length = 440
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 404 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 456
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|B3LH96|CSN5_YEAS1 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=RRI1 PE=3 SV=2
Length = 440
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 404 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 456
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 OS=Drosophila melanogaster
GN=CSN5 PE=1 SV=1
Length = 327
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSATNEEEIFEV---------QDK 401
+ + LE G++ G +++ + E T + + +E +
Sbjct: 66 ARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVG 125
Query: 402 RSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 445
R +GW H+HP C++S IDV T Q VAIV+ P
Sbjct: 126 RMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDP 169
>sp|Q6FT36|CSN5_CANGA COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRI1 PE=3 SV=1
Length = 465
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 348 LAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSATNEEEIFE---------- 397
L + N+E G+L G++ F I E T E +E
Sbjct: 85 LCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMV 144
Query: 398 ----VQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ----DAT 449
+++ +L +GW H+HP C++S+ID+ T Q +AIV+ P D
Sbjct: 145 ERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQK 204
Query: 450 RKHGIFR 456
+ G FR
Sbjct: 205 VRIGSFR 211
>sp|Q6C703|CSN5_YARLI COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRI1 PE=3 SV=1
Length = 354
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 407 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 445
+GW H+HP C++S IDV T + Q +A+V+ P
Sbjct: 135 VGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDP 173
>sp|Q75E19|CSN5_ASHGO COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1
PE=3 SV=1
Length = 420
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 346 MKLAKSNTDK-NLETCGILAGSLKNRKFYITALIIPKQESTSDSATNEEEIFE--VQDKR 402
MK+ + D ++E G+L G +++ + E T + E +E VQ
Sbjct: 81 MKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLE 140
Query: 403 SLFP-----LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 446
+ P +GW H+HP C++S ID T Q +AIV+ P+
Sbjct: 141 TAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPK 189
>sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1
Length = 299
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 357 LETCGILAGSLKNRKFYIT-ALIIPKQES-TSDSATNEEEIFEVQDK---RSLF----PL 407
LE G + G ++ I + +P + + T +A E + + VQ +S++ +
Sbjct: 55 LEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVI 114
Query: 408 GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATR----KHGIFRLTSPGGM 463
GW H+HP C++S +DV T Q VA+V+ P+ + G FR G
Sbjct: 115 GWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGND 174
Query: 464 SVIR 467
IR
Sbjct: 175 GSIR 178
>sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5
PE=2 SV=1
Length = 334
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 20/84 (23%)
Query: 406 PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSPG 461
+GW H+HP C++S IDV T Q VA+V+ P G FR T P
Sbjct: 133 AIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-TYPK 191
Query: 462 GMSVIRQCQQRGFHPHDPPPDGGP 485
G PPD GP
Sbjct: 192 GY---------------KPPDEGP 200
>sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2
SV=1
Length = 332
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 20/84 (23%)
Query: 406 PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSPG 461
+GW H+HP C++S IDV T Q VA+V+ P G FR T P
Sbjct: 131 AIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-TYPK 189
Query: 462 GMSVIRQCQQRGFHPHDPPPDGGP 485
G PPD GP
Sbjct: 190 GY---------------KPPDEGP 198
>sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1
SV=3
Length = 334
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 20/84 (23%)
Query: 406 PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSPG 461
+GW H+HP C++S IDV T Q VA+V+ P G FR T P
Sbjct: 133 AIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-TYPK 191
Query: 462 GMSVIRQCQQRGFHPHDPPPDGGP 485
G PPD GP
Sbjct: 192 GY---------------KPPDEGP 200
>sp|B5X8M4|BRCC3_SALSA Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar GN=brcc3 PE=2
SV=1
Length = 260
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 358 ETCGILAGSL-KNRKFYITALIIPKQ------------ESTSDSATNEEEIFEVQDKRSL 404
E G+ G + NR +I ++II ++ E S +AT E + E+ R +
Sbjct: 27 EVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPEQLSSAATEAERLAEMTG-RPM 85
Query: 405 FPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMA 444
+GW H+HP + + S +DV T YQ+M V ++ +
Sbjct: 86 RVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFS 125
>sp|Q6PC30|CSN5_DANRE COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2
SV=1
Length = 334
Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 20/84 (23%)
Query: 406 PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSPG 461
+GW H+HP C++S IDV T Q VA+V+ P G FR T P
Sbjct: 131 AIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-TYPK 189
Query: 462 GMSVIRQCQQRGFHPHDPPPDGGP 485
G PPD GP
Sbjct: 190 GY---------------KPPDEGP 198
>sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1
SV=4
Length = 334
Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 20/84 (23%)
Query: 406 PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSPG 461
+GW H+HP C++S IDV T Q VA+V+ P G FR T P
Sbjct: 133 AIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-TYPK 191
Query: 462 GMSVIRQCQQRGFHPHDPPPDGGP 485
G PPD GP
Sbjct: 192 GY---------------KPPDEGP 200
>sp|Q7PVR3|EIF3H_ANOGA Eukaryotic translation initiation factor 3 subunit H OS=Anopheles
gambiae GN=AGAP009204 PE=3 SV=3
Length = 334
Score = 39.7 bits (91), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 329 RSEPLQLHISTTMMDNF--MKLAKSNTDKNLETC----GILAGSLKNRKFYITALI-IPK 381
RS+P+ IS D MK+ K +++L G L G + + + IT PK
Sbjct: 9 RSQPVDNTISYVQCDGLAAMKMVKHCHEESLNNMEVAQGALLGLVVDDRLEITNCFPFPK 68
Query: 382 QESTSDSATNEEEIFEVQDKRSL-------FPLGWIHTHPTQSCFMSSIDVHTHYSYQIM 434
+ T D EE +++ R L F +GW + + F+SS + + Y YQ
Sbjct: 69 SDETID-----EEEYQLNMMRRLRHVNVDHFHVGWYQSADVGN-FLSSTLLESQYHYQTS 122
Query: 435 LPESVAIVMAPQDATRKH---GIFRLTSPGGMSVIRQCQQRGFHP 476
+ ESV ++ Q + R +RLT P +++ + +R F P
Sbjct: 123 IEESVVVIYDTQKSARGFLTLKAYRLT-PQAIAMYK---ERDFTP 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,226,588
Number of Sequences: 539616
Number of extensions: 7753678
Number of successful extensions: 22699
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 22542
Number of HSP's gapped (non-prelim): 170
length of query: 507
length of database: 191,569,459
effective HSP length: 122
effective length of query: 385
effective length of database: 125,736,307
effective search space: 48408478195
effective search space used: 48408478195
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)