BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010579
(507 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1
Length = 2715
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 68 GGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPE 127
G + V+T E + ++AVS SG L + +++ I +I ++ LVAG P
Sbjct: 1410 GKHAVQTTLESAT------AIAVSYSGVLYITETDEKKINRIR-QVTTDGEISLVAGIPS 1462
Query: 128 ----------GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
Y DG + A++N P LA G +YIAD N+ IR +S
Sbjct: 1463 ECDCKNDANCDCYQSGDGYAKDAKLNAPSSLAASPDGTLYIADLGNIRIRAVS 1515
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 86 FSVAVSP-SGELLVLDSENSNIYK---ISTSLSPYSRPKLVAGSPEGYYGHVD------G 135
+ +A P +G+L V D+ IY+ ++ + ++VAG+ E + G
Sbjct: 1233 YYLATDPVTGDLYVSDTNTRRIYRPKSLTGAKDLTKNAEVVAGTGEQCLPFDEARCGDGG 1292
Query: 136 RPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
+ A + PKG+A+D G IY D IRK+ G+ + G
Sbjct: 1293 KAVEATLMSPKGMAIDKNGLIYFVD--GTMIRKVDQNGIISTLLG 1335
>sp|Q8BZW8|NHLC2_MOUSE NHL repeat-containing protein 2 OS=Mus musculus GN=Nhlrc2 PE=2 SV=1
Length = 725
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 92 PSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----YGHVDGRPRGARMNHPKG 147
P L V DSE+S + +S L + LV G + +G VDG A++ HP G
Sbjct: 422 PWSCLFVADSESSTVRTVS--LRDGAVKHLVGGERDPMNLFAFGDVDGAGINAKLQHPLG 479
Query: 148 LAVD-DRGNIYIADTMNMAIRKI--SDTGVTTIAGGKWSRGVGHVDGPSEDAKFS----- 199
+A D +R +Y+AD+ N I+ + G TT+AG G + DA S
Sbjct: 480 VAWDEERQVLYVADSYNHKIKVVDPKTKGCTTLAG----------TGDASDASSSFAESA 529
Query: 200 -NDFDVVYVGSSCSLL-VIDRGNQAIREIQLH 229
N+ + +G S LL V D N I+ + L
Sbjct: 530 FNEPGGLCIGESGRLLYVADTNNHQIKVMDLE 561
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 85 PFSVAVS-PSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMN 143
P VAV +G L+V D+ + I I + R + G P G DG + N
Sbjct: 226 PGKVAVDHATGRLVVADTGHHRILVIQKN----GRIQSSIGGPNP--GRKDGMFSESSFN 279
Query: 144 HPKGLAVDDRGNIYIADTMNMAIRKISDTG--VTTIAG 179
P+G+A+ D IY+ADT N IRKI VTT+AG
Sbjct: 280 SPQGVAIADN-VIYVADTENHLIRKIDLEAEKVTTVAG 316
>sp|Q9W7R3|TEN4_DANRE Teneurin-4 OS=Danio rerio GN=tenm4 PE=2 SV=1
Length = 2824
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----------YGHVDGR 136
++AVS +G L + +S+ I ++ +S L+AG+P G Y DG
Sbjct: 1527 ALAVSHNGLLYIAESDEKKINRVR-QVSTNGEISLLAGAPSGCDCKNDANCDCYSGDDGY 1585
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 169
+ A++N P LAV G ++IAD N+ IR +
Sbjct: 1586 AKDAKLNAPSSLAVSPDGELFIADLGNIRIRYV 1618
>sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=TENM4 PE=1 SV=2
Length = 2769
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----------YGHVDGR 136
++AVS +G L + +++ I +I ++ LVAG+P G + DG
Sbjct: 1472 ALAVSHNGVLYIAETDEKKINRIR-QVTTSGEISLVAGAPSGCDCKNDANCDCFSGDDGY 1530
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 169
+ A++N P LAV G +Y+AD N+ IR I
Sbjct: 1531 AKDAKLNTPSSLAVCADGELYVADLGNIRIRFI 1563
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 86 FSVAVSP-SGELLVLDSENSNIYKISTSL---SPYSRPKLVAGSPEGYYGHVD------G 135
+ +A P SG + + DS + ++KI +++ ++VAG+ + D G
Sbjct: 1281 YYLATDPMSGAVFLSDSNSRRVFKIKSTVVVKDLVKNSEVVAGTGDQCLPFDDTRCGDGG 1340
Query: 136 RPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
+ A + +P+G+ VD G IY D IR+I G+ + G
Sbjct: 1341 KATEATLTNPRGITVDKFGLIYFVD--GTMIRRIDQNGIISTLLG 1383
>sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Tenm4 PE=1 SV=2
Length = 2771
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----------YGHVDGR 136
++AVS +G L + +++ I +I ++ LVAG+P G + DG
Sbjct: 1474 ALAVSHNGVLYIAETDEKKINRIR-QVTTSGEISLVAGAPSGCDCKNDANCDCFSGDDGY 1532
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 169
+ A++N P LAV G +Y+AD N+ IR I
Sbjct: 1533 AKDAKLNTPSSLAVCADGELYVADLGNIRIRFI 1565
>sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2 OS=Bos taurus GN=NHLRC2 PE=2 SV=1
Length = 726
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 92 PSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----YGHVDGRPRGARMNHPKG 147
P L V DSE+S + +S L + LV G + +G VDG AR+ HP G
Sbjct: 422 PWSCLFVADSESSTVRTVS--LKDGAVKHLVGGERDPMNLFAFGDVDGVGINARLQHPLG 479
Query: 148 LAVDDRGN-IYIADTMNMAIRKI--SDTGVTTIAG-GKWSRGVGHVDGPSEDAKFSNDFD 203
+ D + N +Y+AD+ N I+ + TT+AG G S +G D+ F N+
Sbjct: 480 VTWDQKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGNASNMIGS---SFTDSTF-NEPG 535
Query: 204 VVYVGSSCSLL-VIDRGNQAIREIQLH 229
+ +G + LL V D N I+ + L
Sbjct: 536 GLCIGENGQLLYVADTNNHQIKVLDLE 562
>sp|F6QEU4|LIN41_XENTR E3 ubiquitin-protein ligase TRIM71 OS=Xenopus tropicalis GN=trim71
PE=3 SV=1
Length = 814
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 48/198 (24%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENS------------NIYK 108
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N N Y
Sbjct: 625 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGTFLNKYG 684
Query: 109 ISTSL-SPYSRPKLVAGSPEGY----------------------YGHVDGRPRGARMNHP 145
+L + P+ VA S +GY + +G G + P
Sbjct: 685 FEGALWKHFDSPRGVAFSQDGYLVVTDFNNHRLLIIKPDCQSAHFLGTEGTGNGQFL-RP 743
Query: 146 KGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 205
+G+AVD G I +AD+ N ++ G G G G +D PS +
Sbjct: 744 QGVAVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQGSGFGQMDRPSG----------I 793
Query: 206 YVGSSCSLLVIDRGNQAI 223
V +++V+D GN I
Sbjct: 794 AVTPDGTIVVVDFGNNRI 811
>sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2
SV=1
Length = 727
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNH 144
P V V SGE LV+ ++ ++I +L + G G DGR A N
Sbjct: 221 PGKVTVDKSGERLVI--ADTGHHRILVTLKNGQILHTIGGPNSGRK---DGRFSEAAFNS 275
Query: 145 PKGLAVDDRGNIYIADTMNMAIRKIS-DTGVTTIAGGKWSRGVGHVDGPS-EDAKFSNDF 202
P+G+A+ + IY+ADT N IRKI + + T G +GV G E+ S+ +
Sbjct: 276 PQGVAIKNN-VIYVADTENHLIRKIDLELEIVTTVAGIGIQGVDKEGGAKGEEQPISSPW 334
Query: 203 DVVYVGSSCS 212
DVV+ G+S S
Sbjct: 335 DVVF-GNSVS 343
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 92 PSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----YGHVDGRPRGARMNHPKG 147
P L V DSE+S + IS L + LV G + +G VDG A++ HP G
Sbjct: 417 PWNCLFVADSESSTVRMIS--LKDGAVKHLVGGERDPLNLFAFGDVDGAGINAKLQHPLG 474
Query: 148 LAVD-DRGNIYIADTMNMAIRKISD--TGVTTIAG-GKWSRGVG 187
+ D R +Y+AD+ N I+ + T+AG G+ S VG
Sbjct: 475 ITWDKKRKLLYVADSYNHKIKVVDPKMKNCATLAGTGEASNVVG 518
>sp|Q1PSW8|LIN41_MOUSE E3 ubiquitin-protein ligase TRIM71 OS=Mus musculus GN=Trim71 PE=1
SV=1
Length = 855
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 46/197 (23%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENSNI------------YK 108
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N I Y
Sbjct: 666 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG 725
Query: 109 ISTSL-SPYSRPKLVAGSPEGYYGHVD---------------GRPRGA------RMNHPK 146
SL + P+ VA + EG+ D R G+ + P+
Sbjct: 726 FEGSLWKHFDSPRGVAFNNEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSGNGQFLRPQ 785
Query: 147 GLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVY 206
G+AVD G I +AD+ N ++ G G G G +D PS A +
Sbjct: 786 GVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDGL---- 841
Query: 207 VGSSCSLLVIDRGNQAI 223
++V+D GN I
Sbjct: 842 ------IVVVDFGNNRI 852
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1
Length = 2731
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD----------GR 136
+++VS SG L + +++ + +I ++ ++AG+P +D G
Sbjct: 1436 AISVSHSGLLFIAETDERKVNRIQ-QVTTNGEISIIAGAPTDCDCKIDPNCDCFSGDGGY 1494
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
+ A+M P LAV G +Y+AD N+ IR IS
Sbjct: 1495 AKDAKMKAPSSLAVSPDGTLYVADLGNVRIRTIS 1528
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 86 FSVAVSPSGELLVL-DSENSNIYKISTSLSPYSRPK---LVAGSPEGYY----GHVD--G 135
+ +A+ P E L L D+ +YK+ + + K +VAG+ + H G
Sbjct: 1245 YYLAMDPMSESLYLSDTNTRKVYKLKSLVETKDLSKNFEVVAGTGDQCLPFDQSHCGDGG 1304
Query: 136 RPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
+ A +N P+G+ VD G IY D IR+I + V T G
Sbjct: 1305 KASEASLNSPRGITVDRHGFIYFVD--GTMIRRIDENAVITTVIG 1347
>sp|D3ZVM4|LIN41_RAT E3 ubiquitin-protein ligase TRIM71 OS=Rattus norvegicus GN=Trim71
PE=3 SV=1
Length = 855
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 46/197 (23%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENSNI------------YK 108
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N I Y
Sbjct: 666 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG 725
Query: 109 ISTSL-SPYSRPKLVAGSPEGYYGHVD---------------GRPRGA------RMNHPK 146
SL + P+ VA + EG+ D R G+ + P+
Sbjct: 726 FEGSLWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQ 785
Query: 147 GLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVY 206
G+AVD G I +AD+ N ++ G G G G +D PS +
Sbjct: 786 GVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSG----------IA 835
Query: 207 VGSSCSLLVIDRGNQAI 223
V ++V+D GN I
Sbjct: 836 VTPEGLIVVVDFGNNRI 852
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 68 GGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPE 127
G ++T EG+ ++++S SG L + +++ I +I +S +AG+P
Sbjct: 1284 GKRAIQTTLEGAT------AISLSYSGVLYIAETDEKKINRIR-QVSTDGEISHLAGAPS 1336
Query: 128 GY----------YGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 169
Y DG + AR+N P L V G +Y+AD N+ IR I
Sbjct: 1337 DCDCKNDANCDCYQTGDGYAKDARLNAPSSLVVSPDGTLYVADLGNIRIRAI 1388
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 72 VETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYK---ISTSLSPYSRPKLVAGSPE 127
V +V E S + +A P +G+L V D+ + I++ ++ + ++VAG+ E
Sbjct: 1093 VTSVMELSNNPAHGYYLATDPMTGQLYVSDTNSRRIFRPKALTGTKELLQNAEVVAGTGE 1152
Query: 128 GYYGHVD------GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
+ G+ A + PKG+AVD G IY D IRK+ G+ + G
Sbjct: 1153 QCLPFDEARCGDGGKATEALLLGPKGIAVDKNGFIYFVD--GTMIRKVDRNGIISTLLG 1209
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2
Length = 2725
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD----------GR 136
+++VS SG L + +++ + +I ++ ++AG+P +D G
Sbjct: 1430 AISVSHSGLLFIAETDERKVNRIQ-QVTTNGEIYIIAGAPTDCDCKIDPNCDCFSGDGGY 1488
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
+ A+M P LAV G +Y+AD N+ IR IS
Sbjct: 1489 AKDAKMKAPSSLAVSPDGTLYVADLGNVRIRTIS 1522
Score = 39.3 bits (90), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 66 FEGGYTVETVFEGSKFGMEPFSVAVSPSGELLVL-DSENSNIYKISTSLSPYSRPK---L 121
F G +V ++ E S + +A+ P E L L D+ +YK+ + + K +
Sbjct: 1220 FPSGNSV-SILELSTSPAHKYYLAMDPVSESLYLSDTNTRKVYKLKSLVETKDLSKNFEV 1278
Query: 122 VAGSPEGYY----GHVD--GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVT 175
VAG+ + H GR A +N P+G+ VD G IY D IRKI + V
Sbjct: 1279 VAGTGDQCLPFDQSHCGDGGRASEASLNSPRGITVDRHGFIYFVD--GTMIRKIDENAVI 1336
Query: 176 TIAGG 180
T G
Sbjct: 1337 TTVIG 1341
>sp|Q1PRL4|LIN41_CHICK E3 ubiquitin-protein ligase TRIM71 OS=Gallus gallus GN=TRIM71 PE=2
SV=1
Length = 876
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 73/205 (35%), Gaps = 62/205 (30%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENSNIYKISTS---LSPYS 117
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N + L+ Y
Sbjct: 687 IFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKY- 745
Query: 118 RPKLVAGSPEGYYGHVDGRPRGARMNH--------------------------------- 144
G + H D PRG NH
Sbjct: 746 ------GFEGALWKHFDS-PRGVTFNHEGHLVVTDFNNHRLLVIHADCQSARFLGSEGSG 798
Query: 145 ------PKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKF 198
P+G+AVD G I +AD+ N ++ G G G G +D PS
Sbjct: 799 NGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGAQGSGFGQMDRPSG---- 854
Query: 199 SNDFDVVYVGSSCSLLVIDRGNQAI 223
+ V ++V+D GN I
Sbjct: 855 ------IAVTPDGMIVVVDFGNNRI 873
>sp|Q03601|NHL1_CAEEL RING finger protein nhl-1 OS=Caenorhabditis elegans GN=nhl-1 PE=1
SV=2
Length = 974
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 139 GARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKF 198
G + P+G+A+D + N+ IAD+ N I+ G + G W G G + G
Sbjct: 897 GGQFKFPRGIAIDSQENLIIADSGNNRIQVFDAQGQFVSSFGTWGGGAGQLKG------- 949
Query: 199 SNDFDVVYVGSSCSLLVIDRGNQAIR 224
+ V V + S++V DR N I+
Sbjct: 950 ---VEDVCVTADGSIVVTDRENHRIQ 972
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 129 YYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGH 188
+ GH G A+ N+P G+AVDD G+IY+AD N ++ G G + G
Sbjct: 795 FGGHGQG---NAKFNNPWGVAVDDLGSIYVADKDNHRVQVFDKNGQFIAKFGSFGHLPGQ 851
Query: 189 VDGP 192
++ P
Sbjct: 852 LNSP 855
>sp|Q2Q1W2|LIN41_HUMAN E3 ubiquitin-protein ligase TRIM71 OS=Homo sapiens GN=TRIM71 PE=1
SV=1
Length = 868
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 36/167 (21%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENSNI------------YK 108
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N I Y
Sbjct: 679 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG 738
Query: 109 ISTSL-SPYSRPKLVAGSPEGYYGHVD---------------GRPRGA------RMNHPK 146
+L + P+ VA + EG+ D R G+ + P+
Sbjct: 739 FEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQ 798
Query: 147 GLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPS 193
G+AVD G I +AD+ N ++ G G G G +D PS
Sbjct: 799 GVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPS 845
>sp|E1BJS7|LIN41_BOVIN E3 ubiquitin-protein ligase TRIM71 OS=Bos taurus GN=TRIM71 PE=3
SV=2
Length = 868
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 78/197 (39%), Gaps = 46/197 (23%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENSNI------------YK 108
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N I Y
Sbjct: 679 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG 738
Query: 109 ISTSL-SPYSRPKLVAGSPEGYYGHVD---------------GRPRGA------RMNHPK 146
+L + P+ VA + EG+ D R G+ + P+
Sbjct: 739 FEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQ 798
Query: 147 GLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVY 206
G+AVD G I +AD+ N ++ G G G G +D PS +
Sbjct: 799 GVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSG----------IA 848
Query: 207 VGSSCSLLVIDRGNQAI 223
V ++V+D GN I
Sbjct: 849 VTPDGMIVVVDFGNNRI 865
>sp|Q8NBF2|NHLC2_HUMAN NHL repeat-containing protein 2 OS=Homo sapiens GN=NHLRC2 PE=1 SV=1
Length = 726
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 92 PSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----YGHVDGRPRGARMNHPKG 147
P L V DSE+S + +S L + LV G + +G VDG A++ HP G
Sbjct: 422 PWSCLFVADSESSTVRTVS--LKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLG 479
Query: 148 LAVDDRGN-IYIADTMNMAIRKI--SDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDV 204
+ D + N +Y+AD+ N I+ + TT+AG + +V S N+
Sbjct: 480 VTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAG---TGDTNNVTSSSFTESTFNEPGG 536
Query: 205 VYVGSSCSLL-VIDRGNQAIREIQLH 229
+ +G + LL V D N I+ + L
Sbjct: 537 LCIGENGELLYVADTNNHQIKVMDLE 562
>sp|Q9V4M2|WECH_DROME Protein wech OS=Drosophila melanogaster GN=wech PE=1 SV=2
Length = 832
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 67 EGGYTVETVFEG---SKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVA 123
EG + + VF+ +K P V +P+G ++V D +N +Y I ++ K
Sbjct: 674 EGRFIRQIVFDNHGQTKGIASPRGVCYTPTGNIIVSDFDNHCLYLIDPDINDILSVKGHE 733
Query: 124 GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAI 166
GS G++ N P GL DD G I +AD+ N I
Sbjct: 734 GS--GFH----------EFNRPSGLCCDDEGRIIVADSKNQRI 764
>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1
Length = 2705
Score = 38.9 bits (89), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 86 FSVAVSPSGELLVL-DSENSNIYKISTSLSPYSRPK---LVAGSPEGYY----GHVD--G 135
+ +AV P E L L D+ +YK + + K +VAG+ + H G
Sbjct: 1219 YYLAVDPVSESLYLSDTNTRRVYKAKSLIETKDLAKNVDVVAGTGDQCLPFDQSHCGDGG 1278
Query: 136 RPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-VTTIAG 179
+ A +N P+G+ +D G IY D IRKI + G +TTI G
Sbjct: 1279 KASEASLNSPRGITIDKHGFIYFVD--GTMIRKIDENGMITTIIG 1321
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD----------GR 136
++AVS SG + +++ I +I ++ ++AG+P +D G
Sbjct: 1410 AIAVSHSGIPYIRETDERKINRIQ-QVTTNGEISIIAGAPSDCDCKIDPNCDCFSGDGGY 1468
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
+ A++ P LAV +Y+AD N+ IR +S
Sbjct: 1469 AKDAKLKAPSSLAVSPDDTLYVADLGNIRIRAVS 1502
>sp|O05871|PKND_MYCTU Serine/threonine-protein kinase PknD OS=Mycobacterium tuberculosis
GN=pknD PE=1 SV=1
Length = 664
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 63 MIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLV 122
++K G T TV + +P +AV +G + V D N + L
Sbjct: 450 VVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDFNNRVV-------------TLA 495
Query: 123 AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKW 182
AGS DG +N+P+GLAVD +G +Y+AD N + K +A G
Sbjct: 496 AGSNNQTVLPFDG------LNYPEGLAVDTQGAVYVADRGNNRVVK--------LAAGSK 541
Query: 183 SRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232
++ V G ND D V V +S ++ V D N + +++ ++
Sbjct: 542 TQTVLPFTG-------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 584
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 35/152 (23%)
Query: 76 FEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVD 134
F G F + P VAV +G N+Y S + Y R KL GS +
Sbjct: 419 FTGIDFRLSPSGVAVDSAG----------NVYVTSEGM--YGRVVKLATGSTGTTVLPFN 466
Query: 135 GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSE 194
G + P+GLAVD G +Y+ D N V T+A G ++ V DG +
Sbjct: 467 G------LYQPQGLAVDGAGTVYVTDFNNR---------VVTLAAGSNNQTVLPFDGLNY 511
Query: 195 DAKFSNDFDVVYVGSSCSLLVIDRGNQAIREI 226
+ D + ++ V DRGN + ++
Sbjct: 512 PEGLAVD-------TQGAVYVADRGNNRVVKL 536
>sp|G5EGQ6|TEN1_CAEEL Teneurin-1 OS=Caenorhabditis elegans GN=ten-1 PE=1 SV=1
Length = 2684
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPY 116
P++V VSPSG++++ DS NS I K+S ++ Y
Sbjct: 1486 PYAVCVSPSGDVIIADSGNSKIKKVSARMAKY 1517
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1
Length = 2802
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPE----------GYYGHVDGR 136
++A+S +G L + +++ I ++ ++ L+AG+ Y DG
Sbjct: 1507 AIAISHTGVLYISETDEKKINRLR-QVTTNGEICLLAGAASDCDCKNDVNCNCYSGDDGY 1565
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
A +N P LAV G IYIAD N+ IR +S
Sbjct: 1566 ATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1599
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 76 FEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD 134
F+ S + +AV P SG L V D+ + IYK+ + + K +AG+ E G +
Sbjct: 1307 FKHSNNPAHKYYLAVDPVSGSLYVSDTNSRRIYKVKS----LTGTKDLAGNSEVVAGTGE 1362
Query: 135 -------------GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
G+ A + P+G+AVD G +Y D IRK+ G+ + G
Sbjct: 1363 QCLPFDEARCGDGGKAVDATLMSPRGIAVDKYGLMYFVDA--TMIRKVDQNGIISTLLG 1419
>sp|E7FAM5|LIN41_DANRE E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio GN=trim71 PE=2
SV=1
Length = 824
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 15/129 (11%)
Query: 67 EGGYTVETVFEGS--KFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAG 124
+G + + FEG+ K P VA + G L+V D N + I RP +
Sbjct: 686 DGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVI--------RPDCQSA 737
Query: 125 SPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSR 184
G G +G+ P+G+AVD I +AD+ N I+ G G
Sbjct: 738 RFLGSEGTGNGQ-----FLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTHGN 792
Query: 185 GVGHVDGPS 193
G G +D PS
Sbjct: 793 GFGQMDRPS 801
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2
Length = 3004
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 86 FSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRPKL----VAGS-------PEGYYGHV 133
+ +AVSP+ G L + D E I ++ L P + V GS EG G
Sbjct: 1293 YYLAVSPADGHLYISDPERHQILRL-VRLEKVKDPSINSDPVVGSGQRCIPGDEGNCG-- 1349
Query: 134 DGRPRG-ARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGV 174
DG P AR++HPKGLA+ +YIAD N IR + GV
Sbjct: 1350 DGGPALLARLSHPKGLAIAADRTMYIADGTN--IRAVDPKGV 1389
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3
Length = 2699
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 72 VETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYK---ISTSLSPYSRPKLVAGSPE 127
V +V E S + +A P +G+L V D+ IY+ ++ + ++VAG+ E
Sbjct: 1203 VTSVLELSSNPAHRYYLATDPVTGDLYVSDTNTRRIYRPKSLTGAKDLTKNAEVVAGTGE 1262
Query: 128 GYYGHVD------GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
+ G+ A + PKG+AVD G IY D IRK+ G+ + G
Sbjct: 1263 QCLPFDEARCGDGGKAVEATLMSPKGMAVDKNGLIYFVD--GTMIRKVDQNGIISTLLG 1319
>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2
Length = 2731
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 86 FSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKL----VAGSPE----GYYGHV-DG 135
+ +A+SP G L V D E+ I ++ + + YS+P+L V GS E G H DG
Sbjct: 1219 YHMALSPLDGTLYVSDPESHQIIRVRDT-NDYSQPELNWEAVVGSGERCLPGDEAHCGDG 1277
Query: 136 R-PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-VTTIAG 179
+ A++ +PKG+A+ +Y AD N IR + G V+T+ G
Sbjct: 1278 ALAKDAKLAYPKGIAISSDNILYFADGTN--IRMVDRDGIVSTLIG 1321
>sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=TENM2 PE=1 SV=3
Length = 2774
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPE----------GYYGHVDGR 136
++A+S +G L + +++ I ++ ++ L+AG+ Y D
Sbjct: 1479 AIAISHTGVLYITETDEKKINRLR-QVTTNGEICLLAGAASDCDCKNDVNCNCYSGDDAY 1537
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
A +N P LAV G IYIAD N+ IR +S
Sbjct: 1538 ATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1571
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 76 FEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD 134
F+ S + +AV P SG L V D+ + IY++ + S K +AG+ E G +
Sbjct: 1279 FKHSNNPAHKYYLAVDPVSGSLYVSDTNSRRIYRVKS----LSGTKDLAGNSEVVAGTGE 1334
Query: 135 -------------GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
G+ A + P+G+AVD G +Y D IRK+ G+ + G
Sbjct: 1335 QCLPFDEARCGDGGKAIDATLMSPRGIAVDKNGLMYFVDA--TMIRKVDQNGIISTLLG 1391
>sp|Q9WTS5|TEN2_MOUSE Teneurin-2 OS=Mus musculus GN=Tenm2 PE=2 SV=1
Length = 2764
Score = 35.8 bits (81), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----------YGHVDGR 136
++A+S +G L + +++ I ++ ++ L+AG+ Y D
Sbjct: 1469 AIAISHTGVLYITETDEKKINRLR-QVTTNGEICLLAGAASDCDCKNDVNCICYSGDDAY 1527
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
A +N P LAV G IYIAD N+ IR +S
Sbjct: 1528 ATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1561
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 86 FSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD---------- 134
+ +AV P +G L V D+ + IY++ + S K +AG+ E G +
Sbjct: 1279 YYLAVDPVTGSLYVSDTNSRRIYRVKS----LSGAKDLAGNSEVVAGTGEQCLPFDEARC 1334
Query: 135 ---GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
G+ A + P+G+AVD G +Y D IRK+ G+ + G
Sbjct: 1335 GDGGKAVDATLMSPRGIAVDKNGLMYFVDA--TMIRKVDQNGIISTLLG 1381
>sp|O75382|TRIM3_HUMAN Tripartite motif-containing protein 3 OS=Homo sapiens GN=TRIM3 PE=1
SV=2
Length = 744
Score = 35.8 bits (81), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
V+ + SG ++V DS N I S G + +G V GR G ++ P G
Sbjct: 492 VSAASSGRIVVADSNNQCIQVFSNE-----------GQFKFRFG-VRGRSPG-QLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AVD G+I +AD N + S G K G G + GP A N +V
Sbjct: 539 VAVDTNGDIIVADYDNRWVSIFSPEGKF-----KTKIGAGRLMGPKGVAVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
SC +
Sbjct: 594 NKSCCVFT 601
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARM 142
M P VAV +G ++V+D+++ ++ + P KLV G +G RGA
Sbjct: 576 MGPKGVAVDRNGHIIVVDNKSCCVF----TFQPNG--KLV-----GRFGG-----RGATD 619
Query: 143 NH---PKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFS 199
H P +AV+++ I + D N +++ S G G G G + P+
Sbjct: 620 RHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTG----- 674
Query: 200 NDFDVVYVGSSCSLLVIDRGNQAIR 224
V V S+ +++V D GN I+
Sbjct: 675 -----VAVDSNGNIIVADWGNSRIQ 694
>sp|Q9R1K2|TEN2_RAT Teneurin-2 OS=Rattus norvegicus GN=Tenm2 PE=1 SV=2
Length = 2774
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGY----------YGHVDGR 136
++A+S +G L + +++ I ++ ++ L+AG+ Y D
Sbjct: 1479 AIAISHTGVLYITETDEKKINRLR-QVTTNGEICLLAGAASDCDCKNDVNCICYSGDDAY 1537
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 170
A +N P LAV G IYIAD N+ IR +S
Sbjct: 1538 ATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1571
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 86 FSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD---------- 134
+ +AV P +G L V D+ + IY++ + S K +AG+ E G +
Sbjct: 1289 YYLAVDPVTGSLYVSDTNSRRIYRVKS----LSGAKDLAGNSEVVAGTGEQCLPFDEARC 1344
Query: 135 ---GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 180
G+ A + P+G+AVD G +Y D IRK+ G+ + G
Sbjct: 1345 GDGGKAVDATLMSPRGIAVDKNGLMYFVDA--TMIRKVDQNGIISTLLG 1391
>sp|Q9R1R2|TRIM3_MOUSE Tripartite motif-containing protein 3 OS=Mus musculus GN=Trim3 PE=1
SV=1
Length = 744
Score = 35.8 bits (81), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
V+ + SG ++V DS N I S G + +G V GR G ++ P G
Sbjct: 492 VSAASSGRIVVADSNNQCIQVFSNE-----------GQFKFRFG-VRGRSPG-QLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AVD G+I +AD N + S G K G G + GP A N +V
Sbjct: 539 VAVDTNGDIIVADYDNRWVSIFSPEGKF-----KTKIGAGRLMGPKGVAVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
SC +
Sbjct: 594 NKSCCVFT 601
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARM 142
M P VAV +G ++V+D+++ ++ + P KLV G +G RGA
Sbjct: 576 MGPKGVAVDRNGHIIVVDNKSCCVF----TFQPNG--KLV-----GRFGG-----RGATD 619
Query: 143 NH---PKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFS 199
H P +AV+++ I + D N +++ S G G G G + P+
Sbjct: 620 RHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTG----- 674
Query: 200 NDFDVVYVGSSCSLLVIDRGNQAIR 224
V V S+ +++V D GN I+
Sbjct: 675 -----VAVDSNGNIIVADWGNSRIQ 694
>sp|P96069|SSAU_SALTY Secretion system apparatus protein SsaU OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ssaU PE=3 SV=1
Length = 352
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 4 NLVVFLLILVFFFGGFSSVSASTPPAKIVAGIVSNVVSALVKWLW 48
+++ LI FFF ++S + P + G++ VVS+L+KWLW
Sbjct: 145 KVIMLSLIFAFFFYYYASTFRALPYCGLACGVL--VVSSLIKWLW 187
>sp|O70277|TRIM3_RAT Tripartite motif-containing protein 3 OS=Rattus norvegicus GN=Trim3
PE=1 SV=1
Length = 744
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Query: 77 EGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGR 136
+G + P S A SG ++V DS N I S G + +G V GR
Sbjct: 483 KGEFTNLHPLSAA--SSGRIVVADSNNQCIQVFSNE-----------GQFKFRFG-VRGR 528
Query: 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDA 196
G ++ P G+AVD G+I +AD N + S G K G G + GP A
Sbjct: 529 SPG-QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKF-----KTKIGAGRLMGPKGVA 582
Query: 197 KFSNDFDVVYVGSSCSLLV 215
N +V SC +
Sbjct: 583 VDRNGHIIVVDNKSCCVFT 601
>sp|D3ZQG6|TRIM2_RAT Tripartite motif-containing protein 2 OS=Rattus norvegicus GN=Trim2
PE=1 SV=2
Length = 744
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
VA S SG++L+ DS N + S SR + SP ++ P G
Sbjct: 492 VAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSP-------------GQLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AV G+I IAD N + S+ G K G G + GP + N +V
Sbjct: 539 VAVHPSGDIIIADYDNKWVSIFSNDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
+C + +
Sbjct: 594 NKACCVFI 601
>sp|Q9ESN6|TRIM2_MOUSE Tripartite motif-containing protein 2 OS=Mus musculus GN=Trim2 PE=1
SV=1
Length = 744
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
VA S SG++L+ DS N + S SR + SP ++ P G
Sbjct: 492 VAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSP-------------GQLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AV G+I IAD N + S+ G K G G + GP + N +V
Sbjct: 539 VAVHPSGDIIIADYDNKWVSIFSNDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
+C + +
Sbjct: 594 NKACCVFI 601
>sp|F7H9X2|TRIM2_CALJA Tripartite motif-containing protein 2 OS=Callithrix jacchus
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
VA S SG++L+ DS N + S SR + SP ++ P G
Sbjct: 492 VAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSP-------------GQLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AV G+I IAD N + S G K G G + GP + N +V
Sbjct: 539 VAVHPSGDIIIADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
+C + +
Sbjct: 594 NKACCVFI 601
>sp|D2GXS7|TRIM2_AILME Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
VA S SG++L+ DS N + S SR + SP ++ P G
Sbjct: 492 VAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSP-------------GQLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AV G+I IAD N + S G K G G + GP + N +V
Sbjct: 539 VAVHPSGDIIIADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
+C + +
Sbjct: 594 NKACCVFI 601
>sp|Q9U489|LIN41_CAEEL Protein lin-41 OS=Caenorhabditis elegans GN=lin-41 PE=2 SV=1
Length = 1147
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 15/118 (12%)
Query: 77 EGSKFG--MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVD 134
EGS G P+ + V G ++V D N+ + + S+ +G
Sbjct: 838 EGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISK-----------FGTSG 886
Query: 135 GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGP 192
RP + + P G+ + NI +AD N ++ + G+ + G R VG+ + P
Sbjct: 887 NRP--GQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYP 942
>sp|Q9C040|TRIM2_HUMAN Tripartite motif-containing protein 2 OS=Homo sapiens GN=TRIM2 PE=1
SV=1
Length = 744
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
VA S +G++L+ DS N + S SR + SP ++ P G
Sbjct: 492 VAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSP-------------GQLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AV G+I IAD N + S G K G G + GP + N +V
Sbjct: 539 VAVHPSGDIIIADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
+C + +
Sbjct: 594 NKACCVFI 601
>sp|A4IF63|TRIM2_BOVIN Tripartite motif-containing protein 2 OS=Bos taurus GN=TRIM2 PE=2
SV=1
Length = 744
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 18/128 (14%)
Query: 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147
VA S +G++L+ DS N + S SR + SP ++ P G
Sbjct: 492 VAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSP-------------GQLQRPTG 538
Query: 148 LAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207
+AV G+I IAD N + S G K G G + GP + N +V
Sbjct: 539 VAVHPSGDIIIADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVD 593
Query: 208 GSSCSLLV 215
+C + +
Sbjct: 594 NKACCVFI 601
>sp|P34611|NCL1_CAEEL B-box type zinc finger protein ncl-1 OS=Caenorhabditis elegans
GN=ncl-1 PE=1 SV=1
Length = 851
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 84 EPFSVAVSPS-GELLVLDSENSNIYKIST----SLSPYSRPKLVAGSPEGYYGHVDGRPR 138
+ +S+ V PS G LL + N + K T S S R K++ G +G ++G+
Sbjct: 530 DKWSLGVEPSVGGLL--EGGNVDEEKFQTLFPPSRSQIKRQKMIYHCKFGEFGVMEGQ-- 585
Query: 139 GARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDA-- 196
P G+AV+ +G+I +ADT N I+ G G+ + G + P+ A
Sbjct: 586 ---FTEPSGVAVNGQGDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVN 642
Query: 197 KFSNDFDV 204
+ + DF V
Sbjct: 643 RTTGDFVV 650
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 208,716,574
Number of Sequences: 539616
Number of extensions: 9693481
Number of successful extensions: 40771
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 37075
Number of HSP's gapped (non-prelim): 2383
length of query: 507
length of database: 191,569,459
effective HSP length: 122
effective length of query: 385
effective length of database: 125,736,307
effective search space: 48408478195
effective search space used: 48408478195
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)