Query 010579
Match_columns 507
No_of_seqs 246 out of 2110
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 09:51:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010579.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010579hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.9 1.6E-22 5.6E-27 217.8 18.6 151 83-235 310-480 (496)
2 4hw6_A Hypothetical protein, I 99.9 1.9E-20 6.4E-25 197.8 21.5 179 34-229 240-432 (433)
3 3tc9_A Hypothetical hydrolase; 99.8 2.1E-19 7.1E-24 189.4 20.0 145 83-229 270-429 (430)
4 3hrp_A Uncharacterized protein 99.8 1E-18 3.4E-23 182.5 22.7 139 83-229 266-409 (409)
5 3fvz_A Peptidyl-glycine alpha- 99.7 2.1E-14 7.1E-19 143.5 27.1 140 80-233 88-230 (329)
6 4hw6_A Hypothetical protein, I 99.7 1.1E-15 3.7E-20 161.4 18.6 164 82-264 227-428 (433)
7 3tc9_A Hypothetical hydrolase; 99.7 1.8E-15 6.1E-20 159.3 17.6 165 82-265 225-426 (430)
8 3hrp_A Uncharacterized protein 99.6 1.9E-14 6.4E-19 150.2 23.4 161 81-258 217-399 (409)
9 3kya_A Putative phosphatase; s 99.6 1.8E-15 6.3E-20 162.9 14.2 166 83-265 247-471 (496)
10 3v64_C Agrin; beta propeller, 99.6 1.2E-13 4.2E-18 141.0 25.0 144 83-260 116-266 (349)
11 3v65_B Low-density lipoprotein 99.6 1.6E-13 5.6E-18 142.0 23.2 176 44-260 127-309 (386)
12 3sov_A LRP-6, low-density lipo 99.6 2.1E-13 7.2E-18 138.1 23.3 175 44-259 46-228 (318)
13 3p5b_L Low density lipoprotein 99.6 5.6E-13 1.9E-17 138.8 25.8 142 82-257 158-308 (400)
14 3fvz_A Peptidyl-glycine alpha- 99.6 1.1E-13 3.8E-18 138.2 18.8 152 81-258 22-216 (329)
15 1ijq_A LDL receptor, low-densi 99.6 1.1E-12 3.8E-17 131.7 25.8 144 82-259 76-228 (316)
16 1npe_A Nidogen, entactin; glyc 99.5 1.4E-12 4.8E-17 125.9 24.1 142 83-258 79-227 (267)
17 3s94_A LRP-6, low-density lipo 99.5 1.7E-12 5.7E-17 143.2 25.6 175 44-259 360-541 (619)
18 3m0c_C LDL receptor, low-densi 99.5 1.8E-12 6.1E-17 146.9 26.2 144 82-259 470-622 (791)
19 3v64_C Agrin; beta propeller, 99.5 1.7E-12 5.8E-17 132.6 23.1 132 82-249 158-296 (349)
20 3v65_B Low-density lipoprotein 99.5 2.7E-12 9.2E-17 132.8 22.5 132 82-249 201-339 (386)
21 4a0p_A LRP6, LRP-6, low-densit 99.5 4.3E-12 1.5E-16 140.2 25.3 175 43-259 47-227 (628)
22 1q7f_A NHL, brain tumor CG1071 99.5 7.7E-12 2.6E-16 120.5 23.1 135 83-250 121-261 (286)
23 1ijq_A LDL receptor, low-densi 99.5 7E-12 2.4E-16 125.8 23.4 114 82-229 119-237 (316)
24 1npe_A Nidogen, entactin; glyc 99.5 8.1E-12 2.8E-16 120.6 22.9 133 83-252 122-263 (267)
25 4a0p_A LRP6, LRP-6, low-densit 99.4 9.4E-12 3.2E-16 137.5 24.9 178 42-258 349-538 (628)
26 1q7f_A NHL, brain tumor CG1071 99.4 1.2E-11 4.1E-16 119.2 22.3 135 82-250 76-217 (286)
27 3sov_A LRP-6, low-density lipo 99.4 1.1E-11 3.9E-16 125.4 22.8 132 82-249 121-259 (318)
28 3p5b_L Low density lipoprotein 99.4 9.9E-12 3.4E-16 129.4 22.6 134 82-249 201-341 (400)
29 3s94_A LRP-6, low-density lipo 99.4 1.4E-11 4.7E-16 135.9 23.6 143 83-259 84-233 (619)
30 3m0c_C LDL receptor, low-densi 99.4 1.4E-11 4.8E-16 139.6 23.5 134 82-249 513-653 (791)
31 1rwi_B Serine/threonine-protei 99.4 2.8E-11 9.7E-16 114.8 20.5 141 83-256 108-251 (270)
32 1rwi_B Serine/threonine-protei 99.4 4.2E-11 1.4E-15 113.6 20.8 139 83-256 67-209 (270)
33 2qc5_A Streptogramin B lactona 99.3 3.2E-10 1.1E-14 108.2 25.0 140 82-255 145-288 (300)
34 1n7d_A LDL receptor, low-densi 99.3 6.4E-12 2.2E-16 140.3 14.1 142 83-258 453-603 (699)
35 2qc5_A Streptogramin B lactona 99.3 1.1E-09 3.9E-14 104.4 25.3 141 82-256 103-247 (300)
36 2z2n_A Virginiamycin B lyase; 99.3 2.1E-09 7.2E-14 102.5 25.7 140 82-255 140-282 (299)
37 1n7d_A LDL receptor, low-densi 99.3 3.1E-11 1.1E-15 134.7 14.7 115 82-230 495-614 (699)
38 2fp8_A Strictosidine synthase; 99.2 1.1E-10 3.9E-15 115.7 14.8 134 83-250 80-239 (322)
39 2z2n_A Virginiamycin B lyase; 99.2 4.5E-09 1.5E-13 100.2 25.1 141 82-256 98-242 (299)
40 2fp8_A Strictosidine synthase; 99.2 6.1E-10 2.1E-14 110.4 19.6 117 83-231 185-314 (322)
41 3e5z_A Putative gluconolactona 99.2 4.1E-09 1.4E-13 102.3 22.5 136 83-250 69-228 (296)
42 2p4o_A Hypothetical protein; p 99.2 9.3E-10 3.2E-14 108.9 17.9 113 83-231 32-148 (306)
43 2p4o_A Hypothetical protein; p 99.2 6.9E-09 2.3E-13 102.6 24.2 140 84-250 73-222 (306)
44 2ism_A Putative oxidoreductase 99.1 1E-09 3.5E-14 112.2 17.7 163 83-257 75-285 (352)
45 3g4e_A Regucalcin; six bladed 99.1 4.4E-09 1.5E-13 103.2 18.9 134 84-250 55-209 (297)
46 3dr2_A Exported gluconolactona 99.1 8.5E-09 2.9E-13 101.4 20.9 136 83-252 86-251 (305)
47 3e5z_A Putative gluconolactona 99.1 5E-09 1.7E-13 101.6 18.0 136 83-251 28-183 (296)
48 3g4e_A Regucalcin; six bladed 99.0 1.2E-08 3.9E-13 100.2 18.5 131 83-248 98-249 (297)
49 3dsm_A Uncharacterized protein 99.0 1.3E-08 4.6E-13 101.7 18.8 134 83-248 172-320 (328)
50 3dr2_A Exported gluconolactona 99.0 7.9E-09 2.7E-13 101.6 16.5 134 84-250 46-198 (305)
51 3dsm_A Uncharacterized protein 99.0 5.9E-08 2E-12 97.0 22.0 161 39-250 58-235 (328)
52 2ism_A Putative oxidoreductase 98.9 3.4E-08 1.2E-12 100.9 17.4 148 83-257 31-221 (352)
53 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 8E-08 2.8E-12 92.7 19.1 114 83-229 71-206 (314)
54 3a9g_A Putative uncharacterize 98.9 6.5E-08 2.2E-12 99.1 18.5 127 83-228 73-229 (354)
55 3a9g_A Putative uncharacterize 98.9 5.3E-08 1.8E-12 99.8 17.3 157 69-257 18-216 (354)
56 2qe8_A Uncharacterized protein 98.8 4.9E-08 1.7E-12 98.0 16.3 158 81-250 65-258 (343)
57 2p9w_A MAL S 1 allergenic prot 98.8 4.9E-08 1.7E-12 100.2 16.3 137 83-231 63-216 (334)
58 2dg1_A DRP35, lactonase; beta 98.8 2.2E-07 7.4E-12 91.0 19.6 136 83-248 135-288 (333)
59 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 6.1E-08 2.1E-12 93.6 14.9 138 83-248 18-180 (314)
60 2dg1_A DRP35, lactonase; beta 98.8 1.3E-06 4.6E-11 85.3 23.0 114 83-230 87-213 (333)
61 2qe8_A Uncharacterized protein 98.8 1.4E-07 4.9E-12 94.6 16.0 125 83-232 17-156 (343)
62 3vgz_A Uncharacterized protein 98.7 2.3E-06 8E-11 83.2 24.0 141 84-251 90-242 (353)
63 3sre_A PON1, serum paraoxonase 98.7 1.2E-07 4.1E-12 98.1 14.1 140 83-254 112-282 (355)
64 3no2_A Uncharacterized protein 98.6 2.1E-06 7.3E-11 84.3 20.4 131 84-246 126-272 (276)
65 2ghs_A AGR_C_1268P; regucalcin 98.6 2.4E-06 8.3E-11 85.1 20.8 132 84-250 91-240 (326)
66 3hfq_A Uncharacterized protein 98.6 1.5E-06 5.2E-11 85.5 16.8 146 84-251 41-198 (347)
67 2ghs_A AGR_C_1268P; regucalcin 98.6 1.8E-06 6E-11 86.1 17.3 130 83-248 134-279 (326)
68 2g8s_A Glucose/sorbosone dehyd 98.5 1.9E-06 6.3E-11 88.1 16.6 136 68-231 6-174 (353)
69 1cru_A Protein (soluble quinop 98.5 1.9E-06 6.5E-11 91.4 17.2 123 68-216 15-160 (454)
70 3sre_A PON1, serum paraoxonase 98.5 1.7E-07 5.8E-12 97.0 8.7 113 80-229 162-297 (355)
71 3hfq_A Uncharacterized protein 98.5 1.4E-05 4.8E-10 78.5 20.4 122 83-229 187-316 (347)
72 3no2_A Uncharacterized protein 98.4 2.8E-06 9.6E-11 83.5 15.2 135 84-250 78-223 (276)
73 3das_A Putative oxidoreductase 98.4 4.9E-06 1.7E-10 85.8 17.0 149 83-256 32-219 (347)
74 3vgz_A Uncharacterized protein 98.4 4.7E-05 1.6E-09 73.9 22.9 134 83-250 185-324 (353)
75 3das_A Putative oxidoreductase 98.4 5E-05 1.7E-09 78.3 22.4 126 83-228 80-233 (347)
76 2p9w_A MAL S 1 allergenic prot 98.3 3.1E-06 1.1E-10 86.9 13.0 123 84-230 138-265 (334)
77 2iwa_A Glutamine cyclotransfer 98.3 2.8E-05 9.6E-10 77.3 19.5 156 44-251 43-217 (266)
78 3scy_A Hypothetical bacterial 98.3 5.1E-05 1.7E-09 75.1 21.0 125 82-234 210-343 (361)
79 2g8s_A Glucose/sorbosone dehyd 98.3 1.1E-05 3.9E-10 82.2 16.7 158 83-249 130-332 (353)
80 3u4y_A Uncharacterized protein 98.3 4.1E-05 1.4E-09 74.1 18.3 127 83-236 176-310 (331)
81 3u4y_A Uncharacterized protein 98.2 9.5E-05 3.3E-09 71.5 19.5 136 84-252 84-233 (331)
82 1l0q_A Surface layer protein; 98.2 0.00028 9.4E-09 69.9 23.1 129 84-249 75-209 (391)
83 3scy_A Hypothetical bacterial 98.2 0.00016 5.5E-09 71.4 21.1 144 83-252 155-318 (361)
84 3nok_A Glutaminyl cyclase; bet 98.2 6.6E-05 2.3E-09 74.8 17.8 130 84-250 97-245 (268)
85 1l0q_A Surface layer protein; 98.2 0.00028 9.7E-09 69.8 22.4 142 39-235 6-152 (391)
86 2iwa_A Glutamine cyclotransfer 98.2 4E-05 1.4E-09 76.1 16.0 112 84-233 22-138 (266)
87 3mbr_X Glutamine cyclotransfer 98.1 0.00018 6.1E-09 70.7 19.6 154 44-250 42-214 (243)
88 4a9v_A PHOX; hydrolase, beta-p 98.1 2.1E-05 7E-10 86.0 14.1 121 82-217 383-549 (592)
89 3nol_A Glutamine cyclotransfer 98.1 0.00022 7.7E-09 70.8 20.4 131 84-251 88-236 (262)
90 1ri6_A Putative isomerase YBHE 98.1 0.00067 2.3E-08 65.1 22.5 141 83-249 178-332 (343)
91 3qqz_A Putative uncharacterize 98.0 0.00053 1.8E-08 67.6 20.6 79 142-230 172-253 (255)
92 1pby_B Quinohemoprotein amine 98.0 0.00037 1.3E-08 66.7 18.2 145 40-233 6-166 (337)
93 1cru_A Protein (soluble quinop 97.9 6.9E-05 2.4E-09 79.4 13.8 121 84-221 78-249 (454)
94 1ri6_A Putative isomerase YBHE 97.9 0.00039 1.3E-08 66.7 17.7 117 84-230 39-160 (343)
95 1jof_A Carboxy-CIS,CIS-muconat 97.9 0.00071 2.4E-08 67.6 19.8 133 82-231 192-342 (365)
96 3nol_A Glutamine cyclotransfer 97.9 0.00055 1.9E-08 67.9 18.3 123 84-229 128-255 (262)
97 3mbr_X Glutamine cyclotransfer 97.9 0.0021 7E-08 63.1 21.8 125 84-230 106-235 (243)
98 1nir_A Nitrite reductase; hemo 97.8 0.0013 4.3E-08 70.8 21.5 144 84-252 180-336 (543)
99 1jmx_B Amine dehydrogenase; ox 97.8 0.00071 2.4E-08 65.2 16.7 145 39-233 15-178 (349)
100 3c75_H MADH, methylamine dehyd 97.8 0.00099 3.4E-08 70.3 18.6 97 45-173 99-209 (426)
101 3bws_A Protein LP49; two-domai 97.7 0.0023 7.9E-08 64.1 19.4 109 84-229 304-431 (433)
102 1jmx_B Amine dehydrogenase; ox 97.7 0.00032 1.1E-08 67.7 12.3 118 85-230 2-134 (349)
103 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.0011 3.8E-08 66.2 16.6 130 83-229 145-290 (365)
104 3qqz_A Putative uncharacterize 97.7 0.00021 7E-09 70.6 10.9 79 83-172 173-252 (255)
105 2mad_H Methylamine dehydrogena 97.7 0.0034 1.2E-07 64.3 20.4 109 84-228 68-194 (373)
106 3bws_A Protein LP49; two-domai 97.6 0.0052 1.8E-07 61.5 20.1 130 84-250 255-411 (433)
107 3sjl_D Methylamine dehydrogena 97.6 0.003 1E-07 65.9 18.6 143 34-223 44-212 (386)
108 3nok_A Glutaminyl cyclase; bet 97.6 0.00088 3E-08 66.7 13.7 108 85-233 57-167 (268)
109 1qks_A Cytochrome CD1 nitrite 97.5 0.0048 1.6E-07 67.2 19.9 99 39-173 171-275 (567)
110 1mda_H Methylamine dehydrogena 97.4 0.0013 4.3E-08 68.1 13.6 112 84-230 67-194 (368)
111 3sjl_D Methylamine dehydrogena 97.4 0.0012 3.9E-08 69.0 12.9 115 91-235 41-174 (386)
112 2oiz_A Aromatic amine dehydrog 97.3 0.013 4.4E-07 59.1 19.5 81 148-249 259-357 (361)
113 3c75_H MADH, methylamine dehyd 97.3 0.0015 5E-08 69.0 12.7 109 95-234 86-213 (426)
114 2mad_H Methylamine dehydrogena 97.3 0.0094 3.2E-07 60.9 18.4 83 148-248 272-370 (373)
115 1nir_A Nitrite reductase; hemo 97.3 0.015 5.2E-07 62.3 20.5 127 82-235 221-360 (543)
116 2oiz_A Aromatic amine dehydrog 97.1 0.0076 2.6E-07 60.8 15.4 98 44-173 30-140 (361)
117 1tl2_A L10, protein (tachylect 97.1 0.0094 3.2E-07 58.1 14.7 111 83-229 41-162 (236)
118 1fwx_A Nitrous oxide reductase 96.9 0.021 7.3E-07 62.6 17.2 185 33-260 100-349 (595)
119 1qks_A Cytochrome CD1 nitrite 96.9 0.0068 2.3E-07 65.9 13.0 106 90-233 163-278 (567)
120 1mda_H Methylamine dehydrogena 96.9 0.0057 1.9E-07 63.1 11.6 107 94-230 32-158 (368)
121 1pby_B Quinohemoprotein amine 96.9 0.023 7.8E-07 54.1 15.1 128 95-250 2-145 (337)
122 2wg3_C Hedgehog-interacting pr 96.8 0.031 1E-06 59.4 17.3 140 69-231 3-187 (463)
123 3q6k_A 43.2 kDa salivary prote 96.8 0.05 1.7E-06 56.6 18.4 151 35-218 171-342 (381)
124 3zwu_A Alkaline phosphatase PH 96.8 0.013 4.3E-07 64.5 14.4 122 80-216 381-548 (592)
125 3amr_A 3-phytase; beta-propell 96.5 0.14 4.8E-06 52.8 18.7 140 95-264 88-253 (355)
126 3s25_A Hypothetical 7-bladed b 96.5 0.092 3.1E-06 52.4 16.9 105 89-236 110-222 (302)
127 4a9v_A PHOX; hydrolase, beta-p 96.4 0.0072 2.5E-07 66.1 8.8 62 81-159 474-548 (592)
128 2ece_A 462AA long hypothetical 96.4 0.074 2.5E-06 56.7 16.2 136 84-229 252-424 (462)
129 2wg3_C Hedgehog-interacting pr 96.3 0.026 8.7E-07 60.1 12.4 119 84-218 70-242 (463)
130 3amr_A 3-phytase; beta-propell 96.2 0.13 4.3E-06 53.1 16.4 75 83-172 180-262 (355)
131 2ece_A 462AA long hypothetical 96.1 0.22 7.6E-06 53.0 18.3 129 84-229 189-351 (462)
132 3hxj_A Pyrrolo-quinoline quino 96.0 0.11 3.8E-06 49.6 14.3 67 144-230 216-284 (330)
133 1fwx_A Nitrous oxide reductase 95.9 0.0089 3E-07 65.6 6.7 74 83-170 277-358 (595)
134 3s25_A Hypothetical 7-bladed b 95.8 0.17 5.8E-06 50.5 15.2 105 85-234 57-180 (302)
135 3hxj_A Pyrrolo-quinoline quino 95.8 0.17 5.7E-06 48.4 14.5 106 87-232 141-246 (330)
136 3q6k_A 43.2 kDa salivary prote 95.6 0.64 2.2E-05 48.3 18.9 147 83-249 152-333 (381)
137 3ow8_A WD repeat-containing pr 95.5 0.58 2E-05 45.6 17.4 115 84-235 166-284 (321)
138 1tl2_A L10, protein (tachylect 95.3 0.32 1.1E-05 47.3 14.3 111 87-234 92-214 (236)
139 2ymu_A WD-40 repeat protein; u 95.2 0.43 1.5E-05 49.4 16.3 110 84-230 428-539 (577)
140 2hqs_A Protein TOLB; TOLB, PAL 95.2 1.7 5.9E-05 44.1 20.4 116 84-235 224-349 (415)
141 2ojh_A Uncharacterized protein 95.0 2 6.8E-05 39.1 19.3 73 84-173 43-119 (297)
142 1gxr_A ESG1, transducin-like e 95.0 2.4 8.1E-05 39.7 22.6 115 83-234 184-300 (337)
143 1got_B GT-beta; complex (GTP-b 94.9 2.9 0.0001 40.5 21.7 115 84-233 186-304 (340)
144 2ymu_A WD-40 repeat protein; u 94.9 4 0.00014 42.0 22.7 75 84-177 387-463 (577)
145 4gqb_B Methylosome protein 50; 94.7 2.1 7.1E-05 42.4 19.0 116 85-234 130-250 (344)
146 3iz6_a 40S ribosomal protein R 94.4 1.9 6.4E-05 42.8 17.8 122 84-230 251-375 (380)
147 1gxr_A ESG1, transducin-like e 94.3 3.5 0.00012 38.6 22.6 113 84-233 143-258 (337)
148 4a2l_A BT_4663, two-component 94.3 1.5 5E-05 48.5 18.4 115 83-233 88-205 (795)
149 2hqs_A Protein TOLB; TOLB, PAL 94.1 4.7 0.00016 40.8 20.6 114 84-234 180-304 (415)
150 3v9f_A Two-component system se 94.1 4.2 0.00014 44.8 21.6 126 83-242 495-624 (781)
151 1erj_A Transcriptional repress 94.1 1.1 3.7E-05 44.7 15.5 113 85-233 126-241 (393)
152 3v9f_A Two-component system se 93.9 4.2 0.00015 44.7 21.2 129 83-242 450-581 (781)
153 3iz6_a 40S ribosomal protein R 93.8 5.1 0.00018 39.5 19.8 80 144-234 251-333 (380)
154 2aq5_A Coronin-1A; WD40 repeat 93.7 1.6 5.6E-05 43.1 15.9 117 84-232 178-301 (402)
155 3ow8_A WD repeat-containing pr 93.7 5.4 0.00019 38.6 23.6 114 84-234 124-241 (321)
156 3ei3_B DNA damage-binding prot 93.6 5.7 0.0002 38.5 20.6 112 84-233 165-285 (383)
157 4g56_B MGC81050 protein; prote 93.4 1.5 5.2E-05 43.3 15.0 118 84-234 141-262 (357)
158 2aq5_A Coronin-1A; WD40 repeat 93.4 1.7 5.8E-05 43.0 15.3 118 84-234 83-211 (402)
159 3zwl_B Eukaryotic translation 93.3 4.4 0.00015 38.3 17.6 72 84-172 177-248 (369)
160 4ery_A WD repeat-containing pr 93.2 5.6 0.00019 37.5 20.1 114 84-234 25-142 (312)
161 1got_B GT-beta; complex (GTP-b 93.2 6.4 0.00022 38.1 19.3 109 84-226 228-339 (340)
162 2vdu_B TRNA (guanine-N(7)-)-me 93.2 3.4 0.00012 41.8 17.4 116 84-233 151-274 (450)
163 1vyh_C Platelet-activating fac 93.1 5 0.00017 40.2 18.5 116 84-235 152-270 (410)
164 3zwl_B Eukaryotic translation 93.1 1.8 6.3E-05 41.0 14.5 110 84-231 34-152 (369)
165 2z3z_A Dipeptidyl aminopeptida 93.1 4.9 0.00017 43.0 19.3 118 84-232 259-393 (706)
166 4aow_A Guanine nucleotide-bind 93.0 1.9 6.6E-05 40.6 14.5 116 85-230 218-337 (340)
167 4a2l_A BT_4663, two-component 93.0 9 0.00031 42.2 21.9 127 83-242 498-627 (795)
168 1sq9_A Antiviral protein SKI8; 92.9 2.8 9.5E-05 40.7 15.9 132 84-234 188-326 (397)
169 1sq9_A Antiviral protein SKI8; 92.9 5.2 0.00018 38.7 17.7 138 84-230 235-395 (397)
170 1vyh_C Platelet-activating fac 92.8 1.7 5.9E-05 43.7 14.6 114 84-234 110-227 (410)
171 1k8k_C P40, ARP2/3 complex 41 92.7 1.4 4.9E-05 42.1 13.2 116 85-232 11-129 (372)
172 3ei3_B DNA damage-binding prot 92.6 7.9 0.00027 37.5 20.2 113 84-230 120-236 (383)
173 2ynn_A Coatomer subunit beta'; 92.6 2.6 9E-05 40.2 14.9 111 84-231 15-129 (304)
174 3mmy_A MRNA export factor; mRN 92.5 2.4 8.2E-05 40.2 14.3 115 84-233 41-163 (368)
175 2ojh_A Uncharacterized protein 92.1 6.7 0.00023 35.5 18.3 111 84-232 86-208 (297)
176 4h5i_A Guanine nucleotide-exch 92.0 0.97 3.3E-05 44.9 11.3 71 144-231 271-344 (365)
177 3zwu_A Alkaline phosphatase PH 92.0 0.4 1.4E-05 52.6 9.0 61 82-159 475-548 (592)
178 2pbi_B Guanine nucleotide-bind 91.9 2.1 7.2E-05 42.1 13.6 109 84-226 242-353 (354)
179 3vl1_A 26S proteasome regulato 91.9 3.5 0.00012 40.4 15.2 72 83-172 140-211 (420)
180 1r5m_A SIR4-interacting protei 91.7 2.9 0.0001 40.4 14.2 123 84-233 47-183 (425)
181 4e54_B DNA damage-binding prot 91.7 5.2 0.00018 40.2 16.5 118 85-233 122-243 (435)
182 4e54_B DNA damage-binding prot 91.5 1.5 5E-05 44.3 12.2 115 85-232 167-284 (435)
183 2pbi_B Guanine nucleotide-bind 91.4 11 0.00039 36.7 20.2 114 85-233 199-318 (354)
184 1k8k_C P40, ARP2/3 complex 41 91.3 10 0.00035 36.0 21.2 135 83-250 97-255 (372)
185 2xyi_A Probable histone-bindin 91.3 2.8 9.5E-05 42.3 14.0 114 84-230 233-353 (430)
186 3frx_A Guanine nucleotide-bind 91.2 2.6 8.8E-05 40.6 13.2 115 84-229 198-316 (319)
187 3frx_A Guanine nucleotide-bind 91.2 8 0.00027 37.1 16.7 75 84-177 67-144 (319)
188 2xyi_A Probable histone-bindin 91.1 2.8 9.6E-05 42.2 13.8 121 84-231 130-264 (430)
189 1r5m_A SIR4-interacting protei 91.1 3.3 0.00011 40.1 13.8 110 84-231 249-362 (425)
190 1yfq_A Cell cycle arrest prote 90.9 1.8 6E-05 41.1 11.5 111 84-230 13-131 (342)
191 3sfz_A APAF-1, apoptotic pepti 90.6 5.6 0.00019 45.6 17.2 69 84-171 617-686 (1249)
192 2pm9_A Protein WEB1, protein t 90.5 3.4 0.00011 40.3 13.4 116 84-233 216-340 (416)
193 4gqb_B Methylosome protein 50; 90.5 14 0.00049 36.2 21.2 80 84-179 171-255 (344)
194 3o4h_A Acylamino-acid-releasin 90.3 8.7 0.0003 40.1 17.2 114 86-228 153-274 (582)
195 4g56_B MGC81050 protein; prote 90.3 14 0.0005 36.1 18.2 79 84-178 183-266 (357)
196 3f3f_A Nucleoporin SEH1; struc 90.1 5.3 0.00018 37.0 13.8 115 84-232 13-145 (351)
197 3dm0_A Maltose-binding peripla 90.1 8.1 0.00028 41.5 17.1 71 84-173 432-503 (694)
198 3vl1_A 26S proteasome regulato 90.0 5 0.00017 39.3 14.2 112 88-235 103-217 (420)
199 2ynn_A Coatomer subunit beta'; 89.9 13 0.00046 35.1 19.7 112 85-232 58-174 (304)
200 3mkq_A Coatomer beta'-subunit; 89.8 15 0.00053 39.4 19.1 69 84-171 57-126 (814)
201 4aez_A CDC20, WD repeat-contai 89.8 15 0.0005 36.3 17.5 110 84-231 219-337 (401)
202 2pm9_A Protein WEB1, protein t 89.5 4.6 0.00016 39.3 13.4 124 84-235 69-202 (416)
203 3fm0_A Protein CIAO1; WDR39,SG 89.5 3 0.0001 40.7 12.0 112 85-231 19-137 (345)
204 1nr0_A Actin interacting prote 89.5 12 0.00041 39.6 17.7 139 84-235 192-360 (611)
205 3lrv_A PRE-mRNA-splicing facto 89.2 16 0.00055 35.1 20.0 116 84-234 127-248 (343)
206 3dw8_B Serine/threonine-protei 89.1 6.7 0.00023 38.6 14.4 141 84-232 228-375 (447)
207 3dwl_C Actin-related protein 2 88.9 2.1 7E-05 41.5 10.3 132 84-233 102-239 (377)
208 2vdu_B TRNA (guanine-N(7)-)-me 88.9 11 0.00039 37.7 16.3 126 84-228 197-337 (450)
209 3k26_A Polycomb protein EED; W 88.9 15 0.00053 34.4 17.7 113 84-230 71-192 (366)
210 3ott_A Two-component system se 88.6 5.8 0.0002 43.4 14.8 116 84-234 473-590 (758)
211 2ecf_A Dipeptidyl peptidase IV 88.4 7.5 0.00026 41.7 15.3 69 85-173 111-181 (741)
212 4ery_A WD repeat-containing pr 88.3 17 0.00057 34.1 22.9 114 84-234 67-184 (312)
213 3mkq_A Coatomer beta'-subunit; 88.3 31 0.001 37.1 21.9 114 84-232 142-261 (814)
214 2pm7_B Protein transport prote 87.9 8.7 0.0003 36.3 13.9 113 85-230 12-132 (297)
215 2ecf_A Dipeptidyl peptidase IV 87.8 11 0.00037 40.4 16.1 85 83-172 37-137 (741)
216 4a11_B DNA excision repair pro 87.4 16 0.00055 35.0 15.6 87 84-172 188-275 (408)
217 3azo_A Aminopeptidase; POP fam 87.4 3.3 0.00011 44.0 11.5 117 84-233 131-277 (662)
218 4h5i_A Guanine nucleotide-exch 87.3 2.4 8.2E-05 42.0 9.8 68 85-170 272-340 (365)
219 3k26_A Polycomb protein EED; W 87.2 20 0.00068 33.7 17.2 75 84-173 117-192 (366)
220 3vu4_A KMHSV2; beta-propeller 86.6 16 0.00053 35.7 15.3 125 84-229 197-335 (355)
221 1erj_A Transcriptional repress 86.5 26 0.0009 34.5 20.6 117 84-230 167-287 (393)
222 3fm0_A Protein CIAO1; WDR39,SG 86.5 24 0.00083 34.0 20.3 114 84-231 63-182 (345)
223 1yfq_A Cell cycle arrest prote 86.5 17 0.00057 34.1 14.9 126 83-235 151-287 (342)
224 3azo_A Aminopeptidase; POP fam 86.4 16 0.00055 38.6 16.3 72 85-171 190-272 (662)
225 1nr0_A Actin interacting prote 86.4 11 0.00036 40.1 14.8 121 84-234 149-274 (611)
226 1pgu_A Actin interacting prote 86.3 10 0.00035 38.9 14.3 119 84-233 162-286 (615)
227 3lrv_A PRE-mRNA-splicing facto 86.1 13 0.00043 35.8 14.1 116 84-231 172-293 (343)
228 3pe7_A Oligogalacturonate lyas 85.9 12 0.00042 36.1 13.9 72 85-173 190-273 (388)
229 3dm0_A Maltose-binding peripla 85.6 41 0.0014 35.9 21.7 119 84-235 474-597 (694)
230 3odt_A Protein DOA1; ubiquitin 85.5 12 0.00042 34.3 13.2 110 84-233 186-299 (313)
231 3gre_A Serine/threonine-protei 85.3 30 0.001 34.0 16.8 133 84-235 216-364 (437)
232 3jrp_A Fusion protein of prote 85.2 25 0.00087 33.1 16.2 119 83-231 102-241 (379)
233 2z3z_A Dipeptidyl aminopeptida 84.9 13 0.00045 39.6 14.8 64 84-170 83-147 (706)
234 1pgu_A Actin interacting prote 84.6 7.7 0.00026 39.9 12.3 111 83-229 489-613 (615)
235 3i2n_A WD repeat-containing pr 84.3 7.7 0.00026 36.6 11.4 110 90-231 176-292 (357)
236 3dwl_C Actin-related protein 2 84.3 4.1 0.00014 39.3 9.6 114 84-230 57-177 (377)
237 3v7d_B Cell division control p 84.0 26 0.00089 34.8 15.7 66 89-173 275-342 (464)
238 3sfz_A APAF-1, apoptotic pepti 83.7 57 0.0019 37.2 20.2 111 84-231 659-775 (1249)
239 2xzm_R RACK1; ribosome, transl 82.7 35 0.0012 32.7 16.7 71 84-173 78-149 (343)
240 4aow_A Guanine nucleotide-bind 82.3 32 0.0011 32.0 15.5 74 84-173 40-117 (340)
241 3i2n_A WD repeat-containing pr 81.3 31 0.0011 32.2 14.4 74 84-170 211-288 (357)
242 4a11_B DNA excision repair pro 81.2 23 0.00078 33.9 13.6 112 84-231 101-219 (408)
243 3dw8_B Serine/threonine-protei 81.2 27 0.00092 34.2 14.4 83 84-171 30-124 (447)
244 2hes_X YDR267CP; beta-propelle 80.7 15 0.0005 35.4 12.0 113 84-230 60-184 (330)
245 3gre_A Serine/threonine-protei 80.7 45 0.0015 32.7 16.0 66 90-172 178-244 (437)
246 3c5m_A Oligogalacturonate lyas 80.3 40 0.0014 32.2 15.0 124 84-234 239-388 (396)
247 3mmy_A MRNA export factor; mRN 80.2 39 0.0013 31.6 18.6 69 84-171 88-158 (368)
248 2oaj_A Protein SNI1; WD40 repe 80.1 12 0.00041 42.3 12.7 29 84-112 490-518 (902)
249 2hes_X YDR267CP; beta-propelle 79.2 30 0.001 33.1 13.7 71 84-170 109-181 (330)
250 3bg1_A Protein SEC13 homolog; 78.2 16 0.00053 34.9 11.2 110 85-230 16-136 (316)
251 2j04_A TAU60, YPL007P, hypothe 77.9 84 0.0029 34.3 17.9 75 85-173 132-211 (588)
252 3vu4_A KMHSV2; beta-propeller 77.5 54 0.0018 31.8 20.6 72 144-231 197-272 (355)
253 1xfd_A DIP, dipeptidyl aminope 77.2 7 0.00024 41.7 9.2 121 84-228 18-151 (723)
254 3jrp_A Fusion protein of prote 77.2 49 0.0017 31.1 18.5 72 84-171 57-132 (379)
255 2oaj_A Protein SNI1; WD40 repe 77.1 26 0.0009 39.5 14.3 68 84-171 19-86 (902)
256 2j04_A TAU60, YPL007P, hypothe 76.5 21 0.00071 39.1 12.6 119 83-233 86-214 (588)
257 3jro_A Fusion protein of prote 76.2 68 0.0023 34.9 17.0 71 85-171 56-130 (753)
258 3o4h_A Acylamino-acid-releasin 75.3 13 0.00044 38.8 10.4 33 146-178 153-191 (582)
259 3ott_A Two-component system se 75.1 98 0.0034 33.6 18.7 110 83-230 517-626 (758)
260 1k32_A Tricorn protease; prote 75.0 79 0.0027 35.8 17.6 72 83-173 379-461 (1045)
261 4gga_A P55CDC, cell division c 75.0 67 0.0023 31.6 19.4 109 84-231 149-262 (420)
262 2oit_A Nucleoporin 214KDA; NH2 74.5 11 0.00037 38.6 9.4 117 84-229 94-222 (434)
263 4aez_A CDC20, WD repeat-contai 73.5 71 0.0024 31.2 22.7 74 144-234 219-297 (401)
264 3jro_A Fusion protein of prote 72.1 1.2E+02 0.004 33.1 20.8 118 83-231 100-239 (753)
265 3pe7_A Oligogalacturonate lyas 71.9 71 0.0024 30.5 18.4 26 87-113 85-111 (388)
266 2gop_A Trilobed protease; beta 70.6 46 0.0016 31.4 12.3 31 145-177 173-213 (347)
267 3v7d_B Cell division control p 69.6 90 0.0031 30.8 21.1 113 84-235 312-426 (464)
268 4ggc_A P55CDC, cell division c 69.2 69 0.0024 29.3 19.1 108 85-231 70-182 (318)
269 4a5s_A Dipeptidyl peptidase 4 69.2 17 0.00058 39.6 9.9 118 86-230 20-151 (740)
270 2pm7_B Protein transport prote 67.4 70 0.0024 29.9 12.8 70 85-170 56-129 (297)
271 1xfd_A DIP, dipeptidyl aminope 67.2 30 0.001 36.8 11.1 72 84-173 62-143 (723)
272 4gga_A P55CDC, cell division c 65.3 1.1E+02 0.0037 30.1 14.6 70 84-172 107-177 (420)
273 1z68_A Fibroblast activation p 64.6 21 0.00073 38.1 9.4 73 85-173 18-99 (719)
274 3odt_A Protein DOA1; ubiquitin 64.4 84 0.0029 28.5 21.1 110 84-228 61-172 (313)
275 3c5m_A Oligogalacturonate lyas 64.2 1E+02 0.0034 29.3 16.2 71 85-172 190-272 (396)
276 2oit_A Nucleoporin 214KDA; NH2 63.6 55 0.0019 33.2 12.0 72 84-173 151-223 (434)
277 2xzm_R RACK1; ribosome, transl 63.4 1E+02 0.0036 29.2 20.8 112 84-229 120-243 (343)
278 2gop_A Trilobed protease; beta 63.0 59 0.002 30.6 11.4 55 85-159 61-121 (347)
279 1k32_A Tricorn protease; prote 59.6 1.1E+02 0.0036 34.8 14.5 29 144-172 380-408 (1045)
280 3sbq_A Nitrous-oxide reductase 57.5 21 0.00072 39.2 7.6 81 83-170 323-405 (638)
281 3q7m_A Lipoprotein YFGL, BAMB; 56.0 1.4E+02 0.0049 28.6 13.0 27 145-173 270-297 (376)
282 4gq1_A NUP37; propeller, trans 55.3 1.1E+02 0.0036 30.1 12.1 129 84-230 138-286 (393)
283 4gq1_A NUP37; propeller, trans 55.0 33 0.0011 33.8 8.3 109 93-233 100-221 (393)
284 2ovr_B FBW7, F-BOX/WD repeat p 54.2 1.7E+02 0.0057 28.7 14.6 62 89-171 124-186 (445)
285 2j04_B YDR362CP, TAU91; beta p 52.9 1.7E+02 0.0057 30.7 13.8 116 84-233 268-389 (524)
286 4a5s_A Dipeptidyl peptidase 4 52.0 28 0.00095 37.9 7.7 27 86-112 65-100 (740)
287 1xip_A Nucleoporin NUP159; bet 50.9 1.3E+02 0.0044 30.8 12.1 80 85-179 90-170 (388)
288 3q7m_A Lipoprotein YFGL, BAMB; 48.3 1.9E+02 0.0065 27.7 17.3 46 210-256 239-284 (376)
289 1kb0_A Quinohemoprotein alcoho 47.3 1.6E+02 0.0055 31.9 12.9 26 208-234 486-511 (677)
290 2bkl_A Prolyl endopeptidase; m 46.5 1.4E+02 0.0049 31.8 12.3 113 86-231 171-305 (695)
291 1kv9_A Type II quinohemoprotei 44.7 1.8E+02 0.006 31.5 12.7 17 91-107 321-337 (668)
292 2ovr_B FBW7, F-BOX/WD repeat p 43.6 2.4E+02 0.0083 27.5 15.6 19 153-171 328-346 (445)
293 1z68_A Fibroblast activation p 43.3 36 0.0012 36.3 6.8 64 85-172 62-138 (719)
294 2xdw_A Prolyl endopeptidase; a 42.6 3.4E+02 0.012 28.9 19.1 27 145-171 235-266 (710)
295 4ggc_A P55CDC, cell division c 41.9 2E+02 0.0068 26.0 15.0 68 87-173 30-98 (318)
296 1p22_A F-BOX/WD-repeat protein 40.8 2.7E+02 0.0092 27.2 16.6 62 89-171 138-200 (435)
297 3f3f_A Nucleoporin SEH1; struc 40.2 2.1E+02 0.0072 25.8 14.1 128 84-232 112-251 (351)
298 2j04_B YDR362CP, TAU91; beta p 39.5 53 0.0018 34.6 7.3 69 86-173 359-428 (524)
299 2bkl_A Prolyl endopeptidase; m 39.2 2E+02 0.0067 30.7 11.9 29 85-113 123-156 (695)
300 4h3o_A Lectin; cadmium, plant 35.2 1.8E+02 0.0063 23.7 9.6 25 83-107 50-74 (105)
301 4b8c_D Glucose-repressible alc 31.2 9.8 0.00033 42.2 -0.2 11 391-402 32-42 (727)
302 3s9j_A Member of DUF4221 famil 31.0 3.7E+02 0.013 27.2 11.8 75 90-177 34-116 (369)
303 1kb0_A Quinohemoprotein alcoho 30.4 5.4E+02 0.019 27.7 16.0 21 152-173 487-508 (677)
304 1kv9_A Type II quinohemoprotei 27.5 6E+02 0.02 27.2 15.5 15 221-235 438-452 (668)
305 1p22_A F-BOX/WD-repeat protein 26.9 4.5E+02 0.015 25.6 15.7 25 146-172 260-284 (435)
306 4h3o_A Lectin; cadmium, plant 26.8 2.6E+02 0.0088 22.8 11.9 23 145-167 52-74 (105)
307 3elq_A Arylsulfate sulfotransf 25.5 4.3E+02 0.015 28.6 11.5 80 141-222 353-455 (571)
308 3sbq_A Nitrous-oxide reductase 21.2 1.5E+02 0.0051 32.6 6.8 83 143-230 323-408 (638)
309 2ad6_A Methanol dehydrogenase 21.1 7.3E+02 0.025 26.0 16.1 15 146-160 389-404 (571)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.6e-22 Score=217.76 Aligned_cols=151 Identities=25% Similarity=0.339 Sum_probs=124.5
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCc---cEEEecCCCCccccCCCCcccccCCCcc-eEEEc------
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSR---PKLVAGSPEGYYGHVDGRPRGARMNHPK-GLAVD------ 151 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~---i~~vaG~~~G~~G~~dG~~~~a~fn~P~-GIaVd------ 151 (507)
..|.+|+++++|+ |||+|+.+|+|++++.++.. +. ..+++|.. |..|..||.+..++|+.|. ++++|
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~-~~~~~~~~~aG~~-g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~ 387 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIK-KEFITPYNFVGGY-KQSGYRDDVGTEARMNNPCQGVFVKNPDYTG 387 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEECCCEEEEEBT-TBCCCBCCBGGGCBCSSEEEEEEEECTTCCS
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCc-ceecccEEecCCC-CCCcccCCcccccccCCCeEEEEEccccccc
Confidence 4699999999998 89999999999998876422 22 36788863 4566668989999999999 89998
Q ss_pred -CCCCEEEEeCCCCeEEEEcCCC-cEEEecCcc------cCCCCCCCC-CccCccCCCCceEEEEcCCCeEEEEeCCCCe
Q 010579 152 -DRGNIYIADTMNMAIRKISDTG-VTTIAGGKW------SRGVGHVDG-PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQA 222 (507)
Q Consensus 152 -~dGnIYVADs~N~rIrk~d~~G-VstIaGG~~------g~~~G~~dg-~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~r 222 (507)
.+|+|||||+.|||||+|+.+| ++|++|... +..+|+.|| ++..++|+.|.+|++...+|+|||+|++|+|
T Consensus 388 ~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~r 467 (496)
T 3kya_A 388 EEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHT 467 (496)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred cCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCE
Confidence 6899999999999999999999 899998532 122366677 8899999999999964335999999999999
Q ss_pred EEEEECCCCceee
Q 010579 223 IREIQLHDDDCSD 235 (507)
Q Consensus 223 Ir~I~l~~~~~~~ 235 (507)
||+|+++++.|..
T Consensus 468 Irki~~~~~~~~~ 480 (496)
T 3kya_A 468 IRTISMEQEENVA 480 (496)
T ss_dssp EEEEEECCCC---
T ss_pred EEEEECCCCcccc
Confidence 9999999988864
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.85 E-value=1.9e-20 Score=197.78 Aligned_cols=179 Identities=23% Similarity=0.323 Sum_probs=135.9
Q ss_pred ceEeEEEecCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeCCCCeEEEEeCC
Q 010579 34 GIVSNVVSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTS 112 (507)
Q Consensus 34 G~l~~va~ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~ 112 (507)
|.++ +++..+++|+++++.++++.. ... ..+. ...+.+|+++++|+ |||+|..+++|++++.+
T Consensus 240 G~ly-v~d~~~~~V~~~d~~~g~~~~----~~~---------~~~~--~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 240 GKIY-YTRYHHAMISSYDPATGTLTE----EEV---------MMDT--KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCEE-ECBTTCSEEEEECTTTCCEEE----EEE---------ECSC--CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CeEE-EEECCCCEEEEEECCCCeEEE----EEe---------ccCC--CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 4454 666667777777776554310 001 1111 12467899999998 99999999999999876
Q ss_pred C--CCCCccEEEecCCCCccccCCCCcccccCCCcceEEE---------cCCCCEEEEeCCCCeEEEEcCCC-cEEEecC
Q 010579 113 L--SPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAV---------DDRGNIYIADTMNMAIRKISDTG-VTTIAGG 180 (507)
Q Consensus 113 g--~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaV---------d~dGnIYVADs~N~rIrk~d~~G-VstIaGG 180 (507)
+ .....+.+++|.. +..|..+|.+..++|+.|.||++ |++|+|||||+.|+||++|+.+| +++++|.
T Consensus 304 ~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~ 382 (433)
T 4hw6_A 304 RETGKLAVPYIVCGQH-SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEGRVTTYAGR 382 (433)
T ss_dssp TTTCCBCCCEEEEECT-TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTSEEEEEECC
T ss_pred CCCcccCcEEEEEecC-CCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCCCEEEEEeC
Confidence 3 2223456788763 44566677788899999999999 89999999999999999999999 8889875
Q ss_pred cccCCCCCCCC-CccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 181 KWSRGVGHVDG-PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 181 ~~g~~~G~~dg-~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
......|+.|| .+..++|+.|.+|++.+.+|+|||+|.+|+|||+|+++
T Consensus 383 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 383 GNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 32112455677 77889999999999644899999999999999999975
No 3
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=2.1e-19 Score=189.37 Aligned_cols=145 Identities=30% Similarity=0.450 Sum_probs=117.7
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCC--CCccEEEecCCCCccccCCCCcccccCCCcc-eEEE--------
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSP--YSRPKLVAGSPEGYYGHVDGRPRGARMNHPK-GLAV-------- 150 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~--~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~-GIaV-------- 150 (507)
..|.+|+++++|+ |||+|..+++|++++.++.. ...+.+++|.. +..|..+|....++|+.|. |+++
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ-GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECT-TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccC-CCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 3699999999998 99999999999999876421 12356778763 4455557777788999999 8999
Q ss_pred cCCCCEEEEeCCCCeEEEEcCCC-cEEEecCc-ccCCCCCCCC-CccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEE
Q 010579 151 DDRGNIYIADTMNMAIRKISDTG-VTTIAGGK-WSRGVGHVDG-PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQ 227 (507)
Q Consensus 151 d~dGnIYVADs~N~rIrk~d~~G-VstIaGG~-~g~~~G~~dg-~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~ 227 (507)
|++|+|||||+.|+||++|+.+| +++++|.. .+. .|+.|| ++..++|+.|.+|++.+.++.|||+|.+|+|||+|+
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~-~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGT-SGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIG 427 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSS-SSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCC-CcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEc
Confidence 46799999999999999999999 78888742 122 345566 778899999999996444799999999999999999
Q ss_pred CC
Q 010579 228 LH 229 (507)
Q Consensus 228 l~ 229 (507)
++
T Consensus 428 ~e 429 (430)
T 3tc9_A 428 YE 429 (430)
T ss_dssp EC
T ss_pred cC
Confidence 75
No 4
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.81 E-value=1e-18 Score=182.52 Aligned_cols=139 Identities=25% Similarity=0.400 Sum_probs=118.4
Q ss_pred CCee-EEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEe
Q 010579 83 MEPF-SVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 160 (507)
Q Consensus 83 ~~P~-gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVAD 160 (507)
..|. +|++++ +|+|||+|..+++|++++.+ +.+.+++|.. +..|..+|....++|+.|.||++|++|+|||||
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~----g~~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad 340 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD----GECEWFCGSA-TQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD 340 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECT-TCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEecC----CCEEEEEeCC-CCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe
Confidence 3577 999999 68999999999999999987 5677888864 344555777778899999999999999999999
Q ss_pred C-CCCeEEEEc-CCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 161 T-MNMAIRKIS-DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 161 s-~N~rIrk~d-~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
+ .|++|++++ .+| +++++|.... .++.+|.+..+.|+.|.+|+ ++.+|.|||+|.+|++||+|+++
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~g~~~~--~g~~~g~~~~~~~~~P~gia-vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVAGQVDV--ASQIDGTPLEATFNYPYDIC-YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEEECTTC--BSCCCBSTTTCCBSSEEEEE-ECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEEeCCCCC--CCcCCCChhceEeCCceEEE-EcCCCCEEEEECCCCeEEEEEeC
Confidence 9 999999999 788 7888874221 45667778889999999999 57779999999999999999863
No 5
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=2.1e-14 Score=143.49 Aligned_cols=140 Identities=20% Similarity=0.285 Sum_probs=102.5
Q ss_pred CCCCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 80 KFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 80 ~~~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
..+..|.+|+++++|+|||+|..+++|++++.++.. ..+..+... +..|. ....|+.|.+|++|+ +|+|||
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~--~~~g~-----~~~~~~~P~~ia~~~~~g~lyv 159 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRS--MQPGS-----DQNHFCQPTDVAVEPSTGAVFV 159 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBT--TBCCC-----STTCCSSEEEEEECTTTCCEEE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEeccc--CCCCC-----CccccCCCcEEEEeCCCCeEEE
Confidence 445689999999999999999999999999987421 123333221 22221 124689999999999 899999
Q ss_pred EeC-CCCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 159 ADT-MNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 159 ADs-~N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+|+ .+++|++++.+| +....+ ..+. ........|..|.+|++.++.+.|||+|.++++|++++++++.+
T Consensus 160 ~d~~~~~~I~~~~~~g~~~~~~~-~~g~-----~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~ 230 (329)
T 3fvz_A 160 SDGYCNSRIVQFSPSGKFVTQWG-EESS-----GSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF 230 (329)
T ss_dssp EECSSCCEEEEECTTSCEEEEEC-EECC-----SSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred EeCCCCCeEEEEcCCCCEEEEec-cCCC-----CCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE
Confidence 997 799999999888 333322 1111 11223457889999996444499999999999999999984433
No 6
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.67 E-value=1.1e-15 Score=161.40 Aligned_cols=164 Identities=15% Similarity=0.130 Sum_probs=121.7
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYV 158 (507)
+..|.+|++++ +|+|||+|..+++|++++++ .+.+ ..+...+ ....+.+|++|++|+ |||
T Consensus 227 ~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~---~g~~~~~~~~~~--------------~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 227 ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA---TGTLTEEEVMMD--------------TKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp CSSBCCCEECTTTCCEEECBTTCSEEEEECTT---TCCEEEEEEECS--------------CCSSCEEEEECTTSSEEEE
T ss_pred cCCCCEEEEeCCCCeEEEEECCCCEEEEEECC---CCeEEEEEeccC--------------CCCCcccEEEeCCCCEEEE
Confidence 46899999999 89999999999999999987 2444 3332221 012456899999998 999
Q ss_pred EeCCCCeEEEEcCC---C----cEEEecCcccCCCCCCCCCccCccCCCCceEEEE--------cCCCeEEEEeCCCCeE
Q 010579 159 ADTMNMAIRKISDT---G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV--------GSSCSLLVIDRGNQAI 223 (507)
Q Consensus 159 ADs~N~rIrk~d~~---G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~v--------d~~G~LyVaD~gn~rI 223 (507)
+|..+++|++++.+ + +.+++|.. +. .|+.||+...++|+.|.+|+++ +.+|+|||+|++|++|
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I 367 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQH-SS-PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTV 367 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECT-TC-CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecC-CC-CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEE
Confidence 99999999998843 2 35777631 11 3556788888999999999953 8899999999999999
Q ss_pred EEEECCCCceeeCCC------------------CCccceEEEE--ecceeEEehhHHHhcc
Q 010579 224 REIQLHDDDCSDNYD------------------DTFHLGIFVL--VAAAFFGYMLALLQRR 264 (507)
Q Consensus 224 r~I~l~~~~~~~~~~------------------~G~p~gIa~~--~~a~~~gy~~~~lq~~ 264 (507)
++|++++...+.... ...|.+||+. .+..|+++...-..++
T Consensus 368 ~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~ 428 (433)
T 4hw6_A 368 RVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRK 428 (433)
T ss_dssp EEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEE
T ss_pred EEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEE
Confidence 999987633322110 1248899998 5667777765443333
No 7
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=1.8e-15 Score=159.30 Aligned_cols=165 Identities=16% Similarity=0.147 Sum_probs=121.3
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 159 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVA 159 (507)
+..|.+|++++ +|+|||+|..+++|+++++++ +....+...+ ....|++|++|++|+ |||+
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~---~~~~~~~~~~--------------~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT---QETTPLFTIQ--------------DSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT---TEEEEEEECS--------------SSSCCEEEEECTTSSEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC---CcEEEEEEcC--------------CCCcceeEEEcCCCCEEEEE
Confidence 46899999999 899999999999999999973 3332332211 124799999999999 9999
Q ss_pred eCCCCeEEEEcCCC-------cEEEecCcccCCCCCCCCCccCccCCCCc-eEEEE-------cCCCeEEEEeCCCCeEE
Q 010579 160 DTMNMAIRKISDTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDF-DVVYV-------GSSCSLLVIDRGNQAIR 224 (507)
Q Consensus 160 Ds~N~rIrk~d~~G-------VstIaGG~~g~~~G~~dg~~~~a~f~~P~-gIa~v-------d~~G~LyVaD~gn~rIr 224 (507)
|..+++|++++.++ +.+++|.. +. .|+.++....+.|+.|. ++++. |.+|+|||+|++|++|+
T Consensus 288 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~ 365 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKTKRLTTPYIVCGQQ-GA-KDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIR 365 (430)
T ss_dssp ETTTTEEEEEEEETTTTEECCCEEEEECT-TC-BCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEE
T ss_pred ECCCCEEEEEeCCcccccccceEEEeccC-CC-CCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEE
Confidence 99999999998553 45677631 11 34557777788999999 67643 46799999999999999
Q ss_pred EEECCCCceeeCCC---------CC---------ccceEEEEe--cceeEEehhHHHhccc
Q 010579 225 EIQLHDDDCSDNYD---------DT---------FHLGIFVLV--AAAFFGYMLALLQRRV 265 (507)
Q Consensus 225 ~I~l~~~~~~~~~~---------~G---------~p~gIa~~~--~a~~~gy~~~~lq~~~ 265 (507)
+|++++........ .| .|.+|++.. +..|+++...-..+++
T Consensus 366 ~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 366 ILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 99977643322111 12 589999985 5677777655444443
No 8
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.64 E-value=1.9e-14 Score=150.17 Aligned_cols=161 Identities=19% Similarity=0.191 Sum_probs=119.2
Q ss_pred CCCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcc-eEEEcC-CCCEE
Q 010579 81 FGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK-GLAVDD-RGNIY 157 (507)
Q Consensus 81 ~~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~-GIaVd~-dGnIY 157 (507)
.+..|.++++++ +|+|||+|. +++|++++.++ +...++++.. ..+. .-..|. +|++++ +|+||
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~---~~~~~~~~~~--~~g~--------~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKT---QEVTLIKQLE--LSGS--------LGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECT-TCEEEEEETTT---CCEEEEEECC--CCSC--------CCCSSCCEEEEETTTTEEE
T ss_pred hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCC---CCEEEEeccc--ccCC--------CCCCccccEEEeCCCCEEE
Confidence 346899999999 899999886 78999999873 4455554432 1111 012377 999999 68999
Q ss_pred EEeCCCCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC-CCCeEEEEECCCCceee
Q 010579 158 IADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-GNQAIREIQLHDDDCSD 235 (507)
Q Consensus 158 VADs~N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~-gn~rIr~I~l~~~~~~~ 235 (507)
|+|..+++|++++.+| +.+++|.... .|+.+++...++|+.|.+|+ ++++|+|||+|. +|++|++|++.......
T Consensus 283 v~d~~~~~I~~~~~~g~~~~~~g~~~~--~g~~dg~~~~~~~~~P~gia-~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECEWFCGSATQ--KTVQDGLREEALFAQPNGMT-VDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECTTC--CSCBCEEGGGCBCSSEEEEE-ECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred EEeCCCCEEEEEecCCCEEEEEeCCCC--CCcCCCcccccEeCCCeEEE-EeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 9999999999999888 7777764311 35667777888999999998 588899999999 99999999955444332
Q ss_pred CCC----------------CCccceEEEEe-cceeEEehh
Q 010579 236 NYD----------------DTFHLGIFVLV-AAAFFGYML 258 (507)
Q Consensus 236 ~~~----------------~G~p~gIa~~~-~a~~~gy~~ 258 (507)
..+ ...|.+|++.. +..|+++..
T Consensus 360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 360 VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 111 13588899887 445665544
No 9
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=1.8e-15 Score=162.94 Aligned_cols=166 Identities=16% Similarity=0.149 Sum_probs=119.3
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCC-------CCCCCc---------cEEEecCCCCccccCCCCcccccCCCc
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTS-------LSPYSR---------PKLVAGSPEGYYGHVDGRPRGARMNHP 145 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~-------g~~~g~---------i~~vaG~~~G~~G~~dG~~~~a~fn~P 145 (507)
..|.+|++++ +|.|||+|..+++|++++++ +..... ...+.-. ..-..|
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--------------~~~~~p 312 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--------------ADPSWE 312 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--------------SSSSCC
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec--------------CCCCCc
Confidence 5799999999 78999999999999999975 221100 0011100 012468
Q ss_pred ceEEEcCCCC-EEEEeCCCCeEEEEcCCC----c---EEEecCcccCCCCCCCCCccCccCCCCc-eEEEEc-------C
Q 010579 146 KGLAVDDRGN-IYIADTMNMAIRKISDTG----V---TTIAGGKWSRGVGHVDGPSEDAKFSNDF-DVVYVG-------S 209 (507)
Q Consensus 146 ~GIaVd~dGn-IYVADs~N~rIrk~d~~G----V---stIaGG~~g~~~G~~dg~~~~a~f~~P~-gIa~vd-------~ 209 (507)
.+||++++|+ |||||+.+|+|++++.++ + ++++|.. +. .|+.||++..++|+.|. +++ ++ .
T Consensus 313 ~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~-~G~~DG~~~~a~f~~P~~gv~-vd~~~~~~~~ 389 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQ-SGYRDDVGTEARMNNPCQGVF-VKNPDYTGEE 389 (496)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TB-CCCBCCBGGGCBCSSEEEEEE-EECTTCCSSC
T ss_pred eEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CC-CcccCCcccccccCCCeEEEE-EccccccccC
Confidence 9999999999 899999999999988554 1 5777732 21 45568999999999999 555 55 6
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceeeCC---------------CCC---------ccceEEEEe--cceeEEehhHHHhc
Q 010579 210 SCSLLVIDRGNQAIREIQLHDDDCSDNY---------------DDT---------FHLGIFVLV--AAAFFGYMLALLQR 263 (507)
Q Consensus 210 ~G~LyVaD~gn~rIr~I~l~~~~~~~~~---------------~~G---------~p~gIa~~~--~a~~~gy~~~~lq~ 263 (507)
+++|||+|++|+|||+|++++...+... ..| .|.||+++. +..|+++..--..+
T Consensus 390 ~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIr 469 (496)
T 3kya_A 390 EYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIR 469 (496)
T ss_dssp CEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 8999999999999999997763322210 011 377888885 56777776655555
Q ss_pred cc
Q 010579 264 RV 265 (507)
Q Consensus 264 ~~ 265 (507)
++
T Consensus 470 ki 471 (496)
T 3kya_A 470 TI 471 (496)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 10
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.61 E-value=1.2e-13 Score=141.00 Aligned_cols=144 Identities=18% Similarity=0.151 Sum_probs=112.7
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEe
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVAD 160 (507)
..|.+|++|+ +|+||++|..+++|.+++.++.. ..++.. ..+..|++|++|+ +|.||++|
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~---------------~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLW---------------QSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------TTCSCEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc---eEEEEe---------------CCCCCcceEEEecCcCeEEEec
Confidence 4799999997 78999999999999999998422 222221 1367899999997 67899999
Q ss_pred CCC-CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee--
Q 010579 161 TMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-- 235 (507)
Q Consensus 161 s~N-~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~-- 235 (507)
.++ ++|.+++.+| ..++.. ..+..|++|++...++.||++|..+++|+++++++.....
T Consensus 178 ~~~~~~I~r~~~dG~~~~~~~~----------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~ 241 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGRRIIAD----------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI 241 (349)
T ss_dssp CSSSCEEEEEETTSCSCEESCC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cCCCCEEEEEeCCCCCcEEEEE----------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEE
Confidence 998 9999999887 333321 2367899999765799999999999999999999865332
Q ss_pred CCCCCccceEEEEecceeEEehhHH
Q 010579 236 NYDDTFHLGIFVLVAAAFFGYMLAL 260 (507)
Q Consensus 236 ~~~~G~p~gIa~~~~a~~~gy~~~~ 260 (507)
....+.|.||++..+..|+.+....
T Consensus 242 ~~~~~~P~giav~~~~ly~td~~~~ 266 (349)
T 3v64_C 242 SQGLPHPFAITVFEDSLYWTDWHTK 266 (349)
T ss_dssp CSSCSSEEEEEEETTEEEEEETTTT
T ss_pred eCCCCCceEEEEECCEEEEecCCCC
Confidence 3345689999998777777775543
No 11
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.58 E-value=1.6e-13 Score=141.97 Aligned_cols=176 Identities=17% Similarity=0.114 Sum_probs=125.3
Q ss_pred CcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEE
Q 010579 44 VKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLV 122 (507)
Q Consensus 44 ~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~v 122 (507)
...||..|...+.+. ....+|...+.... ..+..|.+|++|+ +|+||++|..+++|.++++++.. ..++
T Consensus 127 ~~~ly~~D~~~~~I~-----r~~~~g~~~~~~~~--~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~---~~~l 196 (386)
T 3v65_B 127 RELVFWSDVTLDRIL-----RANLNGSNVEEVVS--TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVL 196 (386)
T ss_dssp TTEEEEEETTTTEEE-----EEETTSCCEEEEEC--SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS---CEEE
T ss_pred CCeEEEEeCCCCcEE-----EEecCCCCcEEEEe--CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc---eEEe
Confidence 455666665555443 11223332333222 1234799999997 78899999999999999998422 2233
Q ss_pred ecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEeCCC-CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccC
Q 010579 123 AGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKF 198 (507)
Q Consensus 123 aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVADs~N-~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f 198 (507)
+. ..|..|+||++|+ +|.||++|..+ ++|.+++.+| ..++.. ..+
T Consensus 197 ~~---------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~----------------~~~ 245 (386)
T 3v65_B 197 LW---------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD----------------THL 245 (386)
T ss_dssp EC---------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC----------------SSC
T ss_pred ec---------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE----------------CCC
Confidence 21 1367999999997 67899999998 9999999887 444432 126
Q ss_pred CCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee--CCCCCccceEEEEecceeEEehhHH
Q 010579 199 SNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVAAAFFGYMLAL 260 (507)
Q Consensus 199 ~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~--~~~~G~p~gIa~~~~a~~~gy~~~~ 260 (507)
..|++|++...++.|||+|..+++|+++++++..... ....+.|.||++..+..|+.+...-
T Consensus 246 ~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~ 309 (386)
T 3v65_B 246 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTK 309 (386)
T ss_dssp SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTT
T ss_pred CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCC
Confidence 6899999765889999999999999999998865332 3345679999998877777775443
No 12
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.58 E-value=2.1e-13 Score=138.11 Aligned_cols=175 Identities=14% Similarity=0.060 Sum_probs=124.5
Q ss_pred CcEEEEEeCCCCeEEecCcceEeeCCee-eEEeecCCCCCCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEE
Q 010579 44 VKWLWSLKDSPKTAVSSSSMIKFEGGYT-VETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKL 121 (507)
Q Consensus 44 ~~~I~~~d~~t~~i~aG~~~~~~~~G~~-~~~~~~G~~~~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~ 121 (507)
...||..|...+.+.. ...+|.. ...... ..+..|.+|++|+ +|+||++|..+++|.++++++.. ..+
T Consensus 46 ~~~lyw~D~~~~~I~r-----~~~~g~~~~~~~~~--~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~ 115 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKR-----TEFNKTESVQNVVV--SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---RKV 115 (318)
T ss_dssp GTEEEEEETTTTEEEE-----EETTSSSCCCEEEE--ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEE
T ss_pred CCEEEEEECCCCcEEE-----EEccCCCceEEEEc--CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---EEE
Confidence 4677777776665541 1112221 111111 1234799999996 78999999999999999998421 233
Q ss_pred EecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEeCC-CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCcc
Q 010579 122 VAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAK 197 (507)
Q Consensus 122 vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVADs~-N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~ 197 (507)
+.. ..+..|+||++|+ .|.||++|.+ +.+|.+++.+| ..++.. ..
T Consensus 116 l~~---------------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~----------------~~ 164 (318)
T 3sov_A 116 LFW---------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN----------------SE 164 (318)
T ss_dssp EEC---------------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC----------------SS
T ss_pred EEe---------------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE----------------CC
Confidence 321 1367899999997 5889999976 79999999887 344431 13
Q ss_pred CCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee--CCCCCccceEEEEecceeEEehhH
Q 010579 198 FSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVAAAFFGYMLA 259 (507)
Q Consensus 198 f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~--~~~~G~p~gIa~~~~a~~~gy~~~ 259 (507)
+..|++|++...++.||++|+.+++|+++++++..... ....+.|.||++..+..|+.+...
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~ 228 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWST 228 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTT
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCC
Confidence 67899999765789999999999999999998855432 234568999999887777766543
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.56 E-value=5.6e-13 Score=138.84 Aligned_cols=142 Identities=16% Similarity=0.137 Sum_probs=111.0
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIA 159 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVA 159 (507)
+..|.+||||. .|+||++|..+++|.++++++. ...+++. ..+..|.+|++|+ .|.||++
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---~~~~l~~---------------~~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFR---------------ENGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC---SEEEEEE---------------CSSCCEEEEEEETTTTEEEEE
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCC---ceEEEEe---------------CCCCCcceEEEecccCeEEEE
Confidence 35799999998 7899999999999999999842 2233321 1367899999998 6789999
Q ss_pred eCC-CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC
Q 010579 160 DTM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN 236 (507)
Q Consensus 160 Ds~-N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~ 236 (507)
|.+ +++|.+++.+| ..++.. ..+..|++|++...++.||++|..+++|+++++++......
T Consensus 220 d~~~~~~I~~~~~dG~~~~~~~~----------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp ECSSSCCEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred eCCCCCEEEEEeCCCCccEEEEE----------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 987 58999999888 444421 13678999997668899999999999999999998664331
Q ss_pred ----CCCCccceEEEEecceeEEeh
Q 010579 237 ----YDDTFHLGIFVLVAAAFFGYM 257 (507)
Q Consensus 237 ----~~~G~p~gIa~~~~a~~~gy~ 257 (507)
.....|.+|++..+..|+.+.
T Consensus 284 ~~~~~~l~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 284 LEDEKRLAHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp EECSSTTSSEEEEEEETTEEEEEES
T ss_pred EeCCCCCCCCEEEEEeCCEEEEecC
Confidence 234578899998777777663
No 14
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.56 E-value=1.1e-13 Score=138.22 Aligned_cols=152 Identities=15% Similarity=0.197 Sum_probs=110.3
Q ss_pred CCCCeeEEEEcCCCcEEEEeCCCC------------------------eEEEEeCCCCCCCccEEEecCCCCccccCCCC
Q 010579 81 FGMEPFSVAVSPSGELLVLDSENS------------------------NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGR 136 (507)
Q Consensus 81 ~~~~P~gIaVd~dG~LYVaDs~n~------------------------rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~ 136 (507)
.+..|.+|+++++|+|||+|..++ +|++++.. .+++....+.
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~----------- 87 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN---NAEILQSSGK----------- 87 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT---TCCEEEEECT-----------
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC---CCeEEeccCC-----------
Confidence 345899999999999999999884 58888875 2444433332
Q ss_pred cccccCCCcceEEEcCCCCEEEEeCCCCeEEEEcCCC----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcC-CC
Q 010579 137 PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SC 211 (507)
Q Consensus 137 ~~~a~fn~P~GIaVd~dGnIYVADs~N~rIrk~d~~G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~-~G 211 (507)
..|+.|.+|++|++|+|||+|..+++|++++.+| +.++. ..+. .| .....|..|.+|++ ++ ++
T Consensus 88 ---~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~--~~~~-~g-----~~~~~~~~P~~ia~-~~~~g 155 (329)
T 3fvz_A 88 ---NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILG--RSMQ-PG-----SDQNHFCQPTDVAV-EPSTG 155 (329)
T ss_dssp ---TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEES--BTTB-CC-----CSTTCCSSEEEEEE-CTTTC
T ss_pred ---CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEec--ccCC-CC-----CCccccCCCcEEEE-eCCCC
Confidence 2578999999999999999999999999999876 23332 1111 01 12346889999995 65 89
Q ss_pred eEEEEeC-CCCeEEEEECCCCceeeCC--C---------CCccceEEEEe--cceeEEehh
Q 010579 212 SLLVIDR-GNQAIREIQLHDDDCSDNY--D---------DTFHLGIFVLV--AAAFFGYML 258 (507)
Q Consensus 212 ~LyVaD~-gn~rIr~I~l~~~~~~~~~--~---------~G~p~gIa~~~--~a~~~gy~~ 258 (507)
.|||+|. .+++|++++.++....... + ...|.+|++.. +..|+.+..
T Consensus 156 ~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp CEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 9999997 8999999998776544321 1 12488999985 344555543
No 15
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.55 E-value=1.1e-12 Score=131.70 Aligned_cols=144 Identities=16% Similarity=0.144 Sum_probs=111.0
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIA 159 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVA 159 (507)
+..|.+|++|. +|+||++|..+++|.++++++. ...+++. ..+..|.+|++|+ +|.||++
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~---------------~~~~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFR---------------ENGSKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEE---------------CTTCCEEEEEEETTTTEEEEE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC---ceEEEEE---------------CCCCCcceEEeCCCCCEEEEE
Confidence 35799999996 7789999999999999998742 2233321 1367899999997 6789999
Q ss_pred eCCC-CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC
Q 010579 160 DTMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN 236 (507)
Q Consensus 160 Ds~N-~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~ 236 (507)
|.++ ++|.+++.+| ..++.. ..+..|++|++...++.||++|..+++|.++++++......
T Consensus 138 d~~~~~~I~~~~~dG~~~~~~~~----------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 138 DWGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp ECSSSCEEEEEETTSCCEEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ccCCCCeEEEEcCCCCCeEEEEE----------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 9986 8999999888 333321 13678999997657899999999999999999988554321
Q ss_pred ----CCCCccceEEEEecceeEEehhH
Q 010579 237 ----YDDTFHLGIFVLVAAAFFGYMLA 259 (507)
Q Consensus 237 ----~~~G~p~gIa~~~~a~~~gy~~~ 259 (507)
...+.|.||++..+..|+.+...
T Consensus 202 ~~~~~~~~~P~giav~~~~ly~~d~~~ 228 (316)
T 1ijq_A 202 LEDEKRLAHPFSLAVFEDKVFWTDIIN 228 (316)
T ss_dssp EECTTTTSSEEEEEEETTEEEEEETTT
T ss_pred eecCCccCCcEEEEEECCEEEEEECCC
Confidence 23457999999877777776543
No 16
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.54 E-value=1.4e-12 Score=125.94 Aligned_cols=142 Identities=15% Similarity=0.182 Sum_probs=106.9
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEe
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVAD 160 (507)
..|.+|++|+ .|+|||+|..+++|.+++.++.. ...+... .+..|.+|++|+ +|+|||+|
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~~~~~~~---------------~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---RRVLFDT---------------GLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECS---------------SCSSEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---EEEEEEC---------------CCCCccEEEEeeCCCEEEEEE
Confidence 5899999998 57899999999999999987422 2233211 257899999999 57899999
Q ss_pred CC--CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee-
Q 010579 161 TM--NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD- 235 (507)
Q Consensus 161 s~--N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~- 235 (507)
.. +++|.+++.+| ..++.. ..+..|.+|++..+.+.|||+|.++++|+++++++.....
T Consensus 141 ~~~~~~~I~~~~~dg~~~~~~~~----------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTNRRILAQ----------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp CCSSSCEEEEEETTSCCCEEEEC----------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred CCCCCcEEEEEecCCCCcEEEEE----------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 87 68999999777 333321 1356899999755578999999999999999998754322
Q ss_pred CCCCCccceEEEEecceeEEehh
Q 010579 236 NYDDTFHLGIFVLVAAAFFGYML 258 (507)
Q Consensus 236 ~~~~G~p~gIa~~~~a~~~gy~~ 258 (507)
......|.+|++..+..|+.+..
T Consensus 205 ~~~~~~P~gi~~d~~~lyva~~~ 227 (267)
T 1npe_A 205 LEGLQYPFAVTSYGKNLYYTDWK 227 (267)
T ss_dssp EECCCSEEEEEEETTEEEEEETT
T ss_pred ecCCCCceEEEEeCCEEEEEECC
Confidence 23345789999886666665543
No 17
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.52 E-value=1.7e-12 Score=143.18 Aligned_cols=175 Identities=13% Similarity=0.111 Sum_probs=127.2
Q ss_pred CcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEE
Q 010579 44 VKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLV 122 (507)
Q Consensus 44 ~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~v 122 (507)
...|+..|...+.+. ....+|...+..... .+..|.|||||. .|+||++|..+++|.+++++|.. ..++
T Consensus 360 ~~~ly~sD~~~~~I~-----r~~~~g~~~~~v~~~--~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~---~~~l 429 (619)
T 3s94_A 360 EGYIYWTDDEVRAIR-----RSFIDGSGSQFVVTA--QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM---RKIL 429 (619)
T ss_dssp TTEEEEEETTTTEEE-----EEETTSCSCEEEECS--SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEE
T ss_pred CCeEEEEeCCCCeEE-----EEEcCCCccEEEEEC--CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe---EEEE
Confidence 456666666555544 222334333333321 235899999996 78899999999999999998532 2333
Q ss_pred ecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEeCCC-CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccC
Q 010579 123 AGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKF 198 (507)
Q Consensus 123 aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVADs~N-~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f 198 (507)
+. ..|+.|++|++|+ +|.||++|.++ .+|.+++.+| ..++.. ..|
T Consensus 430 ~~---------------~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~----------------~~l 478 (619)
T 3s94_A 430 IS---------------EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVN----------------TSL 478 (619)
T ss_dssp EC---------------TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC----------------SSC
T ss_pred EE---------------CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEe----------------CCC
Confidence 32 1378999999998 49999999875 8999999888 344431 237
Q ss_pred CCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee--CCCCCccceEEEEecceeEEehhH
Q 010579 199 SNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVAAAFFGYMLA 259 (507)
Q Consensus 199 ~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~--~~~~G~p~gIa~~~~a~~~gy~~~ 259 (507)
..|+||+++..+++||++|.++++|+++++++..... ......|.|||+..+-.|+.+...
T Consensus 479 ~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~ 541 (619)
T 3s94_A 479 GWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQR 541 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTS
T ss_pred CCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECCEEEEeecCC
Confidence 7999999766789999999999999999999876543 234457899999888777777543
No 18
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.51 E-value=1.8e-12 Score=146.89 Aligned_cols=144 Identities=16% Similarity=0.133 Sum_probs=111.1
Q ss_pred CCCeeEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEEE
Q 010579 82 GMEPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIA 159 (507)
Q Consensus 82 ~~~P~gIaVd~d-G~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYVA 159 (507)
+..|.|||||.. ++||++|..+++|.++++++. ...+++.. .|..|.|||||+. |.||++
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---~~~~l~~~---------------~l~~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------NGSKPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEEC---------------TTCCEEEEEEETTTTEEEEE
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC---eEEEEEeC---------------CCCCcceEEEecCCCCEEEe
Confidence 458999999974 589999999999999999842 23333321 3678999999985 889999
Q ss_pred eCCC-CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC
Q 010579 160 DTMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN 236 (507)
Q Consensus 160 Ds~N-~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~ 236 (507)
|.++ ++|.+++.+| +.++.. ..|..|++|++...+++|||+|..+++|+++++++......
T Consensus 532 D~g~~~~I~~~~~dG~~~~~lv~----------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 532 DWGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp ECSSSCEEEEEETTSCCEEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cCCCCCeEEEEecCCCceEEEEe----------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 9986 8999999888 344421 23679999997658899999999999999999998765432
Q ss_pred --C--CCCccceEEEEecceeEEehhH
Q 010579 237 --Y--DDTFHLGIFVLVAAAFFGYMLA 259 (507)
Q Consensus 237 --~--~~G~p~gIa~~~~a~~~gy~~~ 259 (507)
. ....|.+|++..+..|+.+...
T Consensus 596 ~~~~~~l~~P~glav~~~~lYwtD~~~ 622 (791)
T 3m0c_C 596 LEDEKRLAHPFSLAVFEDKVFWTDIIN 622 (791)
T ss_dssp EECTTTTSSEEEEEEETTEEEEEETTT
T ss_pred ecCCCccCCCCEEEEeCCEEEEEECCC
Confidence 1 2335778888777777777443
No 19
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.51 E-value=1.7e-12 Score=132.55 Aligned_cols=132 Identities=18% Similarity=0.232 Sum_probs=98.8
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n-~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
+..|.+|++|| +|.||++|..+ ++|.+++++| .....+.. ..+..|+||++|+ ++.|||
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG----~~~~~~~~--------------~~~~~PnGla~d~~~~~lY~ 219 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG----SGRRIIAD--------------THLFWPNGLTIDYAGRRMYW 219 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS----CSCEESCC--------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC----CCcEEEEE--------------CCCCCcceEEEeCCCCEEEE
Confidence 46899999998 78899999998 9999999984 22222211 1367899999996 678999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEEC-CCCceee
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL-HDDDCSD 235 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l-~~~~~~~ 235 (507)
+|+.+++|.+++.+| ..++... .+..|.+|++ .++.||++|.++++|++++. .+.....
T Consensus 220 aD~~~~~I~~~~~dG~~~~~~~~~----------------~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 220 VDAKHHVIERANLDGSHRKAVISQ----------------GLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECS----------------SCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EECCCCEEEEEeCCCCceEEEEeC----------------CCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCCccEE
Confidence 999999999999777 3444321 2568999996 46899999999999999994 4443332
Q ss_pred -CCCCCccceEEEEe
Q 010579 236 -NYDDTFHLGIFVLV 249 (507)
Q Consensus 236 -~~~~G~p~gIa~~~ 249 (507)
......|.+|++..
T Consensus 282 i~~~~~~p~gi~v~~ 296 (349)
T 3v64_C 282 IRNKLHFPMDIHTLH 296 (349)
T ss_dssp EECSCSCCCCEEEEC
T ss_pred eccCCCCCceEEEEc
Confidence 22334567777654
No 20
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.48 E-value=2.7e-12 Score=132.83 Aligned_cols=132 Identities=20% Similarity=0.260 Sum_probs=98.6
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n-~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
+..|.+|++|+ +|.||++|..+ ++|+++++++. ...+++.. .+..|+||++|+ +++|||
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---~~~~~~~~---------------~~~~PnGlavd~~~~~lY~ 262 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---GRRIIADT---------------HLFWPNGLTIDYAGRRMYW 262 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---SCEEEECS---------------SCSCEEEEEEEGGGTEEEE
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC---CcEEEEEC---------------CCCCeeeEEEeCCCCEEEE
Confidence 46899999997 67899999998 99999999842 22233221 367899999995 678999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEEC-CCCceee
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL-HDDDCSD 235 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l-~~~~~~~ 235 (507)
+|+.+++|++++.+| ..++.. ..+..|.+|++ .++.||++|.++++|++++. .+.....
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~----------------~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 263 VDAKHHVIERANLDGSHRKAVIS----------------QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EETTTTEEEEECTTSCSCEEEEC----------------SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EECCCCEEEEEeCCCCeeEEEEE----------------CCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 999999999999777 344432 12568999996 56799999999999999994 4433322
Q ss_pred -CCCCCccceEEEEe
Q 010579 236 -NYDDTFHLGIFVLV 249 (507)
Q Consensus 236 -~~~~G~p~gIa~~~ 249 (507)
......|.+|++..
T Consensus 325 i~~~~~~p~gi~v~~ 339 (386)
T 3v65_B 325 IRNKLHFPMDIHTLH 339 (386)
T ss_dssp EECSCSCCCCEEEES
T ss_pred EccCCCCCceEEEEc
Confidence 22334567777653
No 21
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.48 E-value=4.3e-12 Score=140.22 Aligned_cols=175 Identities=17% Similarity=0.089 Sum_probs=126.4
Q ss_pred CCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEE
Q 010579 43 LVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKL 121 (507)
Q Consensus 43 g~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~ 121 (507)
....||..|...+.+. ....+|...+..... .+..|.|||+|. .|+||++|..+++|.+++++|.. ..+
T Consensus 47 ~~~~lywtD~~~~~I~-----r~~~~g~~~~~v~~~--g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~---~~~ 116 (628)
T 4a0p_A 47 TDNRIYWTDISLKTIS-----RAFMNGSALEHVVEF--GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH---RQV 116 (628)
T ss_dssp TTTEEEEEETTTTEEE-----EEETTSCSCEEEECS--SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT---CEE
T ss_pred CCCEEEEEECCCCeEE-----EEECCCCCcEEEEeC--CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc---EEE
Confidence 3456666666655544 112233333333321 124799999996 67899999999999999998432 233
Q ss_pred EecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEeCC-CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCcc
Q 010579 122 VAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAK 197 (507)
Q Consensus 122 vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVADs~-N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~ 197 (507)
+.. ..|..|.+|++|+ +|.||++|.+ +.+|.+++.+| +.+++. .
T Consensus 117 l~~---------------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-----------------~ 164 (628)
T 4a0p_A 117 LVW---------------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-----------------N 164 (628)
T ss_dssp EEC---------------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-----------------S
T ss_pred EEe---------------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-----------------C
Confidence 321 1378899999997 7899999987 88999999887 455531 2
Q ss_pred CCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee-CCCCCccceEEEEecceeEEehhH
Q 010579 198 FSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFVLVAAAFFGYMLA 259 (507)
Q Consensus 198 f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~-~~~~G~p~gIa~~~~a~~~gy~~~ 259 (507)
+..|++|++...+++||++|..+++|+++++++..... ......|.||++..+..|+.+...
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~ 227 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSR 227 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTT
T ss_pred CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCC
Confidence 66899999766689999999999999999998865432 233456889999988778877543
No 22
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.47 E-value=7.7e-12 Score=120.55 Aligned_cols=135 Identities=16% Similarity=0.295 Sum_probs=102.4
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..|.+|+++++|+|||+|..+++|++++.+ +......+.. ..+..|.+|++|++|+|||+|..
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~-------------~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN----GNVLHKFGCS-------------KHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECT-------------TTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCC----CCEEEEeCCC-------------CccCCcEEEEECCCCCEEEEECC
Confidence 579999999999999999999999999986 3333333221 13678999999999999999999
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCC-eEEEEECCCCceeeC---
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ-AIREIQLHDDDCSDN--- 236 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~-rIr~I~l~~~~~~~~--- 236 (507)
+++|++++.+| +.++.. ...+..|.+|+ ++.+|+|||++..++ +|++++.++......
T Consensus 184 ~~~i~~~~~~g~~~~~~~~---------------~g~~~~p~~i~-~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGG---------------EGITNYPIGVG-INSNGEILIADNHNNFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp GTEEEEEETTCCEEEEESC---------------TTTSCSEEEEE-ECTTCCEEEEECSSSCEEEEECTTSCEEEEEEES
T ss_pred CCEEEEEcCCCCEEEEEcc---------------CCccCCCcEEE-ECCCCCEEEEeCCCCEEEEEECCCCCEEEEEccc
Confidence 99999999877 344421 11256899998 588999999999987 999999876543321
Q ss_pred CCCCccceEEEEec
Q 010579 237 YDDTFHLGIFVLVA 250 (507)
Q Consensus 237 ~~~G~p~gIa~~~~ 250 (507)
.....|.+|++...
T Consensus 248 ~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 248 VKHAQCFDVALMDD 261 (286)
T ss_dssp SCCSCEEEEEEETT
T ss_pred CCCCcceeEEECCC
Confidence 12224667877654
No 23
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.46 E-value=7e-12 Score=125.83 Aligned_cols=114 Identities=21% Similarity=0.254 Sum_probs=90.3
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n-~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
+..|.+|++|| +|.||++|..+ ++|.+++++| ....+... ..+..|+||++|+ ++.||+
T Consensus 119 ~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG----~~~~~~~~--------------~~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 119 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG----VDIYSLVT--------------ENIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS----CCEEEEEC--------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC----CCeEEEEE--------------CCCCCceEEEEeccCCEEEE
Confidence 46899999998 78899999986 8999999984 33332221 1367999999996 567999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
+|+.+++|.+++.+| ..+++.. ...+..|.+|++ + ++.||++|.++++|.++++.
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~~~~--------------~~~~~~P~giav-~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLAV-F-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEEEEC--------------TTTTSSEEEEEE-E-TTEEEEEETTTTEEEEEETT
T ss_pred EECCCCeEEEEecCCCceEEEeec--------------CCccCCcEEEEE-E-CCEEEEEECCCCeEEEEeCC
Confidence 999999999999877 5555321 123668999996 4 58999999999999999974
No 24
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=8.1e-12 Score=120.58 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=99.6
Q ss_pred CCeeEEEEcC-CCcEEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEE
Q 010579 83 MEPFSVAVSP-SGELLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYI 158 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~--n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYV 158 (507)
..|.+|++|+ +|.|||+|.. +++|.+++.++.. ..++.. ..+..|+||++|++ +.|||
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~~~---------------~~~~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRILAQ---------------DNLGLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEEEC---------------TTCSCEEEEEEETTTTEEEE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEEEE---------------CCCCCCcEEEEcCCCCEEEE
Confidence 5899999999 6889999987 6899999987421 222221 13578999999996 56999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee-
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD- 235 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~- 235 (507)
+|..+++|.+++.+| +.++.. .+..|.+|++ + ++.|||+|.++++|+++++.+.....
T Consensus 184 ~d~~~~~I~~~~~~g~~~~~~~~-----------------~~~~P~gi~~-d-~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 184 VDAGTHRAECLNPAQPGRRKVLE-----------------GLQYPFAVTS-Y-GKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp EETTTTEEEEEETTEEEEEEEEE-----------------CCCSEEEEEE-E-TTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EECCCCEEEEEecCCCceEEEec-----------------CCCCceEEEE-e-CCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 999999999999877 233311 1457899984 5 68999999999999999998655332
Q ss_pred C-CC-CCccceEEEEecce
Q 010579 236 N-YD-DTFHLGIFVLVAAA 252 (507)
Q Consensus 236 ~-~~-~G~p~gIa~~~~a~ 252 (507)
. .+ ...|.||++....+
T Consensus 245 i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 245 FHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ECCSSCCCCCCEEEECSCC
T ss_pred EccccccccceeeecCccC
Confidence 2 22 22588998876544
No 25
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.45 E-value=9.4e-12 Score=137.48 Aligned_cols=178 Identities=13% Similarity=0.112 Sum_probs=127.1
Q ss_pred cCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecC----CCCCCCeeEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCC
Q 010579 42 ALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEG----SKFGMEPFSVAVSPS-GELLVLDSENSNIYKISTSLSPY 116 (507)
Q Consensus 42 ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G----~~~~~~P~gIaVd~d-G~LYVaDs~n~rI~ki~~~g~~~ 116 (507)
...+.|+..|...+.+. ....+|...+.+... ......|.|||+|.. ++||++|+.+++|.+++.+|
T Consensus 349 ~~~~~iy~sD~~~~~I~-----r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G--- 420 (628)
T 4a0p_A 349 PLDKQLYWIDSRQNMIR-----KAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG--- 420 (628)
T ss_dssp TTTTEEEEEETTTTEEE-----EEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS---
T ss_pred cCCCeEEEEecCcceEE-----EEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCC---
Confidence 34466666666655554 222334333333221 112458999999985 67999999999999999984
Q ss_pred CccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEeCCCC--eEEEEcCCC--cEEEecCcccCCCCCCCC
Q 010579 117 SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNM--AIRKISDTG--VTTIAGGKWSRGVGHVDG 191 (507)
Q Consensus 117 g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVADs~N~--rIrk~d~~G--VstIaGG~~g~~~G~~dg 191 (507)
....++.. ..++.|++|++|+ +|.||++|.+++ +|.+++.+| ..++..
T Consensus 421 -~~~~~l~~--------------~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~------------ 473 (628)
T 4a0p_A 421 -RSVGVVLK--------------GEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFF------------ 473 (628)
T ss_dssp -CEEEEEEE--------------CTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEEC------------
T ss_pred -CeEEEEEe--------------CCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEe------------
Confidence 33322211 1367899999999 899999999987 799999888 455532
Q ss_pred CccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC--CCCCccceEEEEecceeEEehh
Q 010579 192 PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YDDTFHLGIFVLVAAAFFGYML 258 (507)
Q Consensus 192 ~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~--~~~G~p~gIa~~~~a~~~gy~~ 258 (507)
..+..|++|+++..+++||++|..+++|+++++++..-... .....|.|||+..+..|+.+..
T Consensus 474 ----~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~ 538 (628)
T 4a0p_A 474 ----SGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQ 538 (628)
T ss_dssp ----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEETTEEEEEETT
T ss_pred ----ccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEECCEEEEEECC
Confidence 13779999997666799999999999999999998664432 3345689999988877777743
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.44 E-value=1.2e-11 Score=119.19 Aligned_cols=135 Identities=17% Similarity=0.295 Sum_probs=102.4
Q ss_pred CCCeeEEEE-cCCCcEEEEeCC-CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEE
Q 010579 82 GMEPFSVAV-SPSGELLVLDSE-NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 159 (507)
Q Consensus 82 ~~~P~gIaV-d~dG~LYVaDs~-n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVA 159 (507)
...|.+|++ +++|+|||++.. +++|++++.+ +......+. ..+..|.+|++|++|+|||+
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~ 137 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY----GQFVRKFGA--------------TILQHPRGVTVDNKGRIIVV 137 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGCEEEEECTT----SCEEEEECT--------------TTCSCEEEEEECTTSCEEEE
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC----CcEEEEecC--------------ccCCCceEEEEeCCCCEEEE
Confidence 357999999 579999999975 7999999976 433322221 13568999999999999999
Q ss_pred eCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeCC
Q 010579 160 DTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY 237 (507)
Q Consensus 160 Ds~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~~ 237 (507)
|..+++|++++.+| +.++.. ...+..|.+|+ ++.+|+|||+|..+++|+++++++.......
T Consensus 138 ~~~~~~i~~~~~~g~~~~~~~~---------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~ 201 (286)
T 1q7f_A 138 ECKVMRVIIFDQNGNVLHKFGC---------------SKHLEFPNGVV-VNDKQEIFISDNRAHCVKVFNYEGQYLRQIG 201 (286)
T ss_dssp ETTTTEEEEECTTSCEEEEEEC---------------TTTCSSEEEEE-ECSSSEEEEEEGGGTEEEEEETTCCEEEEES
T ss_pred ECCCCEEEEEcCCCCEEEEeCC---------------CCccCCcEEEE-ECCCCCEEEEECCCCEEEEEcCCCCEEEEEc
Confidence 99999999999877 333311 12356799998 5888999999999999999999776544322
Q ss_pred CC---CccceEEEEec
Q 010579 238 DD---TFHLGIFVLVA 250 (507)
Q Consensus 238 ~~---G~p~gIa~~~~ 250 (507)
.. ..|.+|++...
T Consensus 202 ~~g~~~~p~~i~~d~~ 217 (286)
T 1q7f_A 202 GEGITNYPIGVGINSN 217 (286)
T ss_dssp CTTTSCSEEEEEECTT
T ss_pred cCCccCCCcEEEECCC
Confidence 22 46888888654
No 27
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.44 E-value=1.1e-11 Score=125.40 Aligned_cols=132 Identities=19% Similarity=0.198 Sum_probs=98.0
Q ss_pred CCCeeEEEEcC-CCcEEEEeCC-CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSE-NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~-n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
+..|.+|++|+ .|.||++|.. +++|.+++++|.. ..+++.. .+..|+||++|+ +++||+
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~---------------~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINS---------------EIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECS---------------SCSCEEEEEEETTTTEEEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEEC---------------CCCCccEEEEeccCCEEEE
Confidence 46899999998 6899999975 7999999998421 2233211 377999999997 677999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC-Cceee
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD-DDCSD 235 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~-~~~~~ 235 (507)
+|+.+++|++++.+| ..+++. ..+..|.+|++ + .+.||++|.++++|.++++.. .....
T Consensus 183 aD~~~~~I~~~d~dG~~~~~~~~----------------~~~~~P~glav-~-~~~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 183 ADAKLNFIHKSNLDGTNRQAVVK----------------GSLPHPFALTL-F-EDILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp EETTTTEEEEEETTSCSCEEEEC----------------SCCSCEEEEEE-E-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EECCCCEEEEEcCCCCceEEEec----------------CCCCCceEEEE-e-CCEEEEEecCCCeEEEEECCCCCceEE
Confidence 999999999999877 455531 13668999995 4 569999999999999999853 32221
Q ss_pred -CCCCCccceEEEEe
Q 010579 236 -NYDDTFHLGIFVLV 249 (507)
Q Consensus 236 -~~~~G~p~gIa~~~ 249 (507)
......|.+|++.-
T Consensus 245 i~~~~~~P~~i~v~~ 259 (318)
T 3sov_A 245 IHSDIFSPMDIHAFS 259 (318)
T ss_dssp EECCCSSCCCEEEEC
T ss_pred EeCCCCCCcEEEEec
Confidence 22233566666543
No 28
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.43 E-value=9.9e-12 Score=129.42 Aligned_cols=134 Identities=19% Similarity=0.208 Sum_probs=98.0
Q ss_pred CCCeeEEEEcC-CCcEEEEeCC-CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSE-NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~-n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
+..|.+|++|+ +|.||++|.+ +++|.+++++|. ...+++. ..|..|+|||+|+ +++||+
T Consensus 201 ~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~---~~~~~~~---------------~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 201 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---DIYSLVT---------------ENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC---SCEEEEC---------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC---ccEEEEE---------------CCCCceEEEEEEeCCCEEEE
Confidence 46799999998 7889999987 589999999842 2223321 1377999999996 577999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC-CCceee
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH-DDDCSD 235 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~-~~~~~~ 235 (507)
||+.+++|++++.+| ..+++.+ ...+..|.+|++ .++.||++|.++++|++++.. +.....
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~--------------~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNL 326 (400)
T ss_dssp EETTTTEEEEEETTSCCCEEEEEC--------------SSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESSSCCCCEE
T ss_pred EECCCCEEEEEeCCCCccEEEEeC--------------CCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcCCCCceEE
Confidence 999999999999877 4555321 124678999985 467999999999999999954 333322
Q ss_pred -CCCCCccceEEEEe
Q 010579 236 -NYDDTFHLGIFVLV 249 (507)
Q Consensus 236 -~~~~G~p~gIa~~~ 249 (507)
......|.+|++.-
T Consensus 327 i~~~~~~p~~i~v~~ 341 (400)
T 3p5b_L 327 LAENLLSPEDMVLFH 341 (400)
T ss_dssp EECSCSCEEEEEEES
T ss_pred EecCCCCCceEEEEe
Confidence 22223466666543
No 29
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.42 E-value=1.4e-11 Score=135.88 Aligned_cols=143 Identities=15% Similarity=0.105 Sum_probs=109.0
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEEEe
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYVAD 160 (507)
..|.|||+|. .|+||++|..+++|.+++.+|. ...+++. ..|+.|.+|++|+. |.||++|
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~---~~~~l~~---------------~~l~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---LRKVLFW---------------QELDQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEC---------------SSCSCCCCEEEETTTTEEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC---CEEEEEe---------------CCCCCCceEEEecCCCeEEEec
Confidence 4799999998 6789999999999999999842 2233332 13789999999985 7899999
Q ss_pred CC-CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC-
Q 010579 161 TM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN- 236 (507)
Q Consensus 161 s~-N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~- 236 (507)
.+ +.+|.+++.+| ..++.. ..+..|+||++...+++||++|..+++|+++++++..-...
T Consensus 146 ~g~~~~I~r~~~dG~~~~~l~~----------------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~ 209 (619)
T 3s94_A 146 WGEVPKIERAGMDGSSRFIIIN----------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 209 (619)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC----------------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---
T ss_pred cCCCCEEEEEECCCCceEEEEe----------------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE
Confidence 87 67999999888 445532 13678999997667899999999999999999998654332
Q ss_pred -CCCCccceEEEEecceeEEehhH
Q 010579 237 -YDDTFHLGIFVLVAAAFFGYMLA 259 (507)
Q Consensus 237 -~~~G~p~gIa~~~~a~~~gy~~~ 259 (507)
.....|.||++..+..|+.+...
T Consensus 210 ~~~~~~P~gi~~~~~~ly~td~~~ 233 (619)
T 3s94_A 210 KGSLPHPFALTLFEDILYWTDWST 233 (619)
T ss_dssp ------CCCEEESSSEEEEECTTT
T ss_pred eCCCCCceEEEEeCCEEEEecCCC
Confidence 23446899999887777776543
No 30
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.41 E-value=1.4e-11 Score=139.58 Aligned_cols=134 Identities=19% Similarity=0.210 Sum_probs=98.2
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n-~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
+..|.+|+||+ .|.||++|.++ ++|.+++++|. ...+++. ..|..|+|||+|+ +|+|||
T Consensus 513 l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~---~~~~lv~---------------~~l~~P~GLavD~~~~~LYw 574 (791)
T 3m0c_C 513 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---DIYSLVT---------------ENIQWPNGITLDLLSGRLYW 574 (791)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---CEEEEEC---------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC---ceEEEEe---------------CCCCCceEEEEecCCCeEEE
Confidence 45799999998 58999999886 89999999842 2223321 1378999999995 678999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC-ceee
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD-DCSD 235 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~-~~~~ 235 (507)
||..+++|++++.+| +.+++.+ ...|..|.+|++ ..+.||++|..+++|++++...+ ....
T Consensus 575 aD~~~~~I~~~d~dG~~~~~v~~~--------------~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 575 VDSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNL 638 (791)
T ss_dssp EETTTTEEEEEETTSCSCEEEEEC--------------TTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred EeCCCCcEEEEecCCCceEEEecC--------------CCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEE
Confidence 999999999999887 4555321 124778999985 45699999999999999986433 2222
Q ss_pred -CCCCCccceEEEEe
Q 010579 236 -NYDDTFHLGIFVLV 249 (507)
Q Consensus 236 -~~~~G~p~gIa~~~ 249 (507)
......|.+|++.-
T Consensus 639 l~~~l~~P~~i~v~h 653 (791)
T 3m0c_C 639 LAENLLSPEDMVLFH 653 (791)
T ss_dssp EECSCSCCCCEEEES
T ss_pred eecCCCCceeEeeec
Confidence 22233466666543
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=2.8e-11 Score=114.83 Aligned_cols=141 Identities=18% Similarity=0.261 Sum_probs=102.9
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..|.+|+++++|+|||+|..+++|++++... ... .... ...+..|.+|++|++|+|||+|..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~---~~~-~~~~--------------~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGS---KTQ-TVLP--------------FTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTC---CSC-EECC--------------CCSCCSCCCEEECTTCCEEEEEGG
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCC---cee-Eeec--------------cccCCCceeEEEeCCCCEEEEECC
Confidence 5799999999999999999999999996531 111 1110 113568999999999999999999
Q ss_pred CCeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeCCCC--C
Q 010579 163 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDD--T 240 (507)
Q Consensus 163 N~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~~~~--G 240 (507)
+++|.+++.++-...... ...+..|.+|+ ++.+|+|||++..+++|+++++++......... .
T Consensus 170 ~~~i~~~~~~~~~~~~~~--------------~~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~ 234 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLP--------------FTDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN 234 (270)
T ss_dssp GTEEEEECTTTCCEEECC--------------CSSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCS
T ss_pred CCEEEEEecCCCceEeec--------------ccCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCC
Confidence 999999997762211100 11246789998 588899999999999999999988665543322 3
Q ss_pred ccceEEEEec-ceeEEe
Q 010579 241 FHLGIFVLVA-AAFFGY 256 (507)
Q Consensus 241 ~p~gIa~~~~-a~~~gy 256 (507)
.|.+|++... ..++++
T Consensus 235 ~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 235 TPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp CEEEEEECTTCCEEEEE
T ss_pred CceeEEECCCCCEEEEE
Confidence 5778887643 334443
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.37 E-value=4.2e-11 Score=113.63 Aligned_cols=139 Identities=24% Similarity=0.321 Sum_probs=102.6
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..|.+|+++++|+|||++. +++|++++.++. ....+. . ..+..|.+|++|++|+|||+|..
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~---~~~~~~-~--------------~~~~~p~~i~~~~~g~l~v~~~~ 127 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN---NQTVLP-F--------------DGLNYPEGLAVDTQGAVYVADRG 127 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCS---CCEECC-C--------------CSCSSEEEEEECTTCCEEEEEGG
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCc---eEeeee-c--------------CCcCCCcceEECCCCCEEEEECC
Confidence 5799999999999999999 889999998732 222211 0 12568999999999999999999
Q ss_pred CCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeCC--CC
Q 010579 163 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY--DD 239 (507)
Q Consensus 163 N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~~--~~ 239 (507)
+++|.+++... ...... ...+..|.+|+ ++.+|+|||+|..+++|.++++.+....... ..
T Consensus 128 ~~~i~~~~~~~~~~~~~~---------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 191 (270)
T 1rwi_B 128 NNRVVKLAAGSKTQTVLP---------------FTGLNDPDGVA-VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI 191 (270)
T ss_dssp GTEEEEECTTCCSCEECC---------------CCSCCSCCCEE-ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC
T ss_pred CCEEEEEECCCceeEeec---------------cccCCCceeEE-EeCCCCEEEEECCCCEEEEEecCCCceEeecccCC
Confidence 99999998654 222210 12356799998 5788899999999999999999887654432 22
Q ss_pred CccceEEEEec-ceeEEe
Q 010579 240 TFHLGIFVLVA-AAFFGY 256 (507)
Q Consensus 240 G~p~gIa~~~~-a~~~gy 256 (507)
..|.+|++... ..+++.
T Consensus 192 ~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp CSEEEEEECTTCCEEEEE
T ss_pred CCceEEEECCCCCEEEEE
Confidence 45788888654 334443
No 33
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.34 E-value=3.2e-10 Score=108.25 Aligned_cols=140 Identities=15% Similarity=0.265 Sum_probs=104.4
Q ss_pred CCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 82 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 82 ~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
...|.+|+++++|+|||++..+++|++++.+ +....+... ..+..|.+|++|++|+|||++.
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITNT----GKLEEYPLP--------------TNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECCC----CcEEEeeCC--------------CCCCCcceEEECCCCCEEEEcc
Confidence 4589999999999999999999999999985 444433211 1256899999999999999999
Q ss_pred CCCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC--CC
Q 010579 162 MNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YD 238 (507)
Q Consensus 162 ~N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~--~~ 238 (507)
.+++|.+++.+| +..+.. ...+..|.+|+ .+.+|+|||++.++++|.++++.+....+. ..
T Consensus 207 ~~~~i~~~~~~g~~~~~~~---------------~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 270 (300)
T 2qc5_A 207 MGNKIGRITTTGEISEYDI---------------PTPNARPHAIT-AGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTE 270 (300)
T ss_dssp TTTEEEEECTTCCEEEEEC---------------SSTTCCEEEEE-ECSTTCEEEEETTTTEEEEECTTSCEEEEECCST
T ss_pred CCCEEEEEcCCCcEEEEEC---------------CCCCCCceEEE-ECCCCCEEEeccCCCeEEEECCCCcEEEEECCcc
Confidence 999999999877 443321 01255789998 588899999999999999999865443332 22
Q ss_pred CCccceEEEEec-ceeEE
Q 010579 239 DTFHLGIFVLVA-AAFFG 255 (507)
Q Consensus 239 ~G~p~gIa~~~~-a~~~g 255 (507)
...|.+|++... ..+++
T Consensus 271 ~~~~~~i~~~~~g~l~v~ 288 (300)
T 2qc5_A 271 NAEPHGITFGKDGSVWFA 288 (300)
T ss_dssp TCCCCCEEECTTSCEEEE
T ss_pred CCccceeEeCCCCCEEEE
Confidence 345778887643 33444
No 34
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.33 E-value=6.4e-12 Score=140.28 Aligned_cols=142 Identities=16% Similarity=0.163 Sum_probs=106.9
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEe
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVAD 160 (507)
..|.+|+||. .|+|||+|..+++|.++++++. ...+++.. .+..|.||++|+ .|.||++|
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~---~~~~l~~~---------------~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------QGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSC---CEEEECCC---------------SSCCCCCEECCSSSSCCEECC
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCC---ceEEEEeC---------------CCCCcceEEEccCCCcEEEcc
Confidence 4799999995 7899999999999999998732 23333221 367899999998 57899999
Q ss_pred CCC-CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC-
Q 010579 161 TMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN- 236 (507)
Q Consensus 161 s~N-~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~- 236 (507)
.++ ++|.+++.+| ..+++ ...|..|++|++....+.|||+|..+++|+++++++......
T Consensus 515 ~~~~~~I~~~~~dG~~~~~l~----------------~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGVDIYSLV----------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 578 (699)
T ss_dssp CSSSCCEEBCCSSSCCCCEES----------------CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEEC
T ss_pred cCCCCeEEEEeCCCCCeeEEE----------------eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEE
Confidence 876 8999999877 33332 124678999996546799999999999999999987543331
Q ss_pred ---CCCCccceEEEEecceeEEehh
Q 010579 237 ---YDDTFHLGIFVLVAAAFFGYML 258 (507)
Q Consensus 237 ---~~~G~p~gIa~~~~a~~~gy~~ 258 (507)
...+.|.+|++..+..|+.+..
T Consensus 579 ~~~~~~~~P~glavd~~~lywtd~~ 603 (699)
T 1n7d_A 579 EDEKRLAHPFSLAVFEDKVFWTDII 603 (699)
T ss_dssp CCSSSCSSCCCCEEETTEEEEECST
T ss_pred ecCCcCCCceEeEEECCEEEEEeCC
Confidence 2235688999988777776643
No 35
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=1.1e-09 Score=104.40 Aligned_cols=141 Identities=11% Similarity=0.165 Sum_probs=104.5
Q ss_pred CCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 82 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 82 ~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
+..|.+|+++++|+|||++..+++|.+++++ +.+..+... ..+..|.+|++|++|+|||++.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD----GTIYEYDLP--------------NKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT----SCEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC----CCEEEccCC--------------CCCCCceeEEECCCCCEEEEec
Confidence 3579999999999999999988999999986 444433211 1245899999999999999999
Q ss_pred CCCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC--CC
Q 010579 162 MNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YD 238 (507)
Q Consensus 162 ~N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~--~~ 238 (507)
.+++|.+++.++ +..+.. ...+..|.+|+ .+.+|+|||++..+++|.++++.+...... ..
T Consensus 165 ~~~~i~~~~~~g~~~~~~~---------------~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 228 (300)
T 2qc5_A 165 QNNSIGRITNTGKLEEYPL---------------PTNAAAPVGIT-SGNDGALWFVEIMGNKIGRITTTGEISEYDIPTP 228 (300)
T ss_dssp TTTEEEEECTTCCEEEEEC---------------SSTTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSST
T ss_pred CCCeEEEECCCCcEEEeeC---------------CCCCCCcceEE-ECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCC
Confidence 999999999877 443321 01245789998 578899999999999999999855443332 22
Q ss_pred CCccceEEEEec-ceeEEe
Q 010579 239 DTFHLGIFVLVA-AAFFGY 256 (507)
Q Consensus 239 ~G~p~gIa~~~~-a~~~gy 256 (507)
...|.+|++... ..+++.
T Consensus 229 ~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp TCCEEEEEECSTTCEEEEE
T ss_pred CCCceEEEECCCCCEEEec
Confidence 345778887643 344444
No 36
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.26 E-value=2.1e-09 Score=102.48 Aligned_cols=140 Identities=14% Similarity=0.211 Sum_probs=102.1
Q ss_pred CCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 82 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 82 ~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
+..|.+|+++++|+|||++..++.|.+++.+ +.+..+... ..+..|.+|++|++|+|||++.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITES----GDITEFKIP--------------TPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcCC----CcEEEeeCC--------------CCCCcceeEEECCCCCEEEEcc
Confidence 4579999999999999999988999999984 444443211 1246799999999999999999
Q ss_pred CCCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC--CC
Q 010579 162 MNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YD 238 (507)
Q Consensus 162 ~N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~--~~ 238 (507)
.+++|.+++.++ +..+... ..+..|.+|+ .+.+|+|||++..++.|.++++++....+. ..
T Consensus 202 ~~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~ 265 (299)
T 2z2n_A 202 IGNKIGRITTSGEITEFKIP---------------TPNARPHAIT-AGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIK 265 (299)
T ss_dssp TTTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEEETTTEEEEEECSSS
T ss_pred CCceEEEECCCCcEEEEECC---------------CCCCCceeEE-ECCCCCEEEeccCCceEEEECCCCceEEEeCCCC
Confidence 999999999866 4433210 1245788998 588899999999999999999865333221 22
Q ss_pred CCccceEEEEecceeEE
Q 010579 239 DTFHLGIFVLVAAAFFG 255 (507)
Q Consensus 239 ~G~p~gIa~~~~a~~~g 255 (507)
...|.++++..+..+++
T Consensus 266 ~~~~~~i~~~~g~l~v~ 282 (299)
T 2z2n_A 266 SAEPHGICFDGETIWFA 282 (299)
T ss_dssp SCCEEEEEECSSCEEEE
T ss_pred CCccceEEecCCCEEEE
Confidence 23567777622333444
No 37
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.26 E-value=3.1e-11 Score=134.68 Aligned_cols=115 Identities=21% Similarity=0.257 Sum_probs=89.0
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEE
Q 010579 82 GMEPFSVAVSP-SGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYI 158 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n-~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYV 158 (507)
+..|.+|+||+ .|.||++|..+ ++|.++++++.. ..+++ . ..|..|+|||+|++ +.|||
T Consensus 495 ~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~-~--------------~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 495 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLV-T--------------ENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---CCEES-C--------------SSCSSCCCEEECTTTCCEEE
T ss_pred CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---eeEEE-e--------------CCCCCccEEEEeccCCEEEE
Confidence 35799999998 67899999876 899999987421 11221 1 14779999999975 77999
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
+|+.+++|.+++.+| ..+++.. ...+..|.+|++ +. +.|||+|..+++|+++++.+
T Consensus 557 aD~~~~~I~~~d~dG~~~~~~~~~--------------~~~~~~P~glav-d~-~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLAV-FE-DKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp EETTTTEEEEECSSSSCCEEECCC--------------SSSCSSCCCCEE-ET-TEEEEECSTTTCEEEEETTT
T ss_pred EecCCCeEEEEccCCCceEEEEec--------------CCcCCCceEeEE-EC-CEEEEEeCCCCeEEEEEccC
Confidence 999999999999877 4555321 124678999985 44 49999999999999999753
No 38
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.22 E-value=1.1e-10 Score=115.73 Aligned_cols=134 Identities=13% Similarity=0.101 Sum_probs=97.0
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEe
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVAD 160 (507)
..|.+|++++ +|+|||+|.. +.|+++++.+ +.+..++... ++ ..++.|++|++|+ +|+|||+|
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~---g~~~~~~~~~-------~~----~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEG---GHATQLATSV-------DG----VPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTC---EECEEEESEE-------TT----EECSCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCC---CEEEEecccC-------CC----CcccccceEEEecCCCEEEEEC
Confidence 3799999997 8999999986 5699999762 4455554321 11 2578899999999 99999999
Q ss_pred CCC-----------------CeEEEEcCC-C-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC-eEEEEeCCC
Q 010579 161 TMN-----------------MAIRKISDT-G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGN 220 (507)
Q Consensus 161 s~N-----------------~rIrk~d~~-G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G-~LyVaD~gn 220 (507)
..+ ++|.+++.+ + +..+.. .+..|++|++ ++++ .|||+|..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----------------~~~~p~gia~-~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 145 VSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----------------ELHVPGGAEV-SADSSFVLVAEFLS 206 (322)
T ss_dssp SCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----------------EESCCCEEEE-CTTSSEEEEEEGGG
T ss_pred CcccccccccceehcccCCCceEEEEeCCCCEEEEecc-----------------CCccCcceEE-CCCCCEEEEEeCCC
Confidence 763 578888865 4 443321 2568999985 6665 599999999
Q ss_pred CeEEEEECCCCc---e-eeCCCCCccceEEEEec
Q 010579 221 QAIREIQLHDDD---C-SDNYDDTFHLGIFVLVA 250 (507)
Q Consensus 221 ~rIr~I~l~~~~---~-~~~~~~G~p~gIa~~~~ 250 (507)
++|+++++++.. . ......| |.+|+++..
T Consensus 207 ~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp TEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred CeEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 999999988632 1 1111234 888877654
No 39
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.21 E-value=4.5e-09 Score=100.18 Aligned_cols=141 Identities=13% Similarity=0.215 Sum_probs=103.2
Q ss_pred CCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 82 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 82 ~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
...|.+|+++++|.|||++..+++|.+++++ +....+... .....|.+|++|++|+|||++.
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITDD----GKIREYELP--------------NKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSCEEEEET
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECCC----CCEEEecCC--------------CCCCCCceEEEcCCCCEEEEeC
Confidence 4589999999999999999989999999985 444443221 1245799999999999999999
Q ss_pred CCCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee--CCC
Q 010579 162 MNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYD 238 (507)
Q Consensus 162 ~N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~--~~~ 238 (507)
.++.|.+++.+| +..+... ..+..|.+|+ .+.+|.|||++..++.|.++++.+....+ ...
T Consensus 160 ~~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 223 (299)
T 2z2n_A 160 QNNAIGRITESGDITEFKIP---------------TPASGPVGIT-KGNDDALWFVEIIGNKIGRITTSGEITEFKIPTP 223 (299)
T ss_dssp TTTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSST
T ss_pred CCCEEEEEcCCCcEEEeeCC---------------CCCCcceeEE-ECCCCCEEEEccCCceEEEECCCCcEEEEECCCC
Confidence 999999999876 4443210 1245788998 57889999999999999999994433322 112
Q ss_pred CCccceEEEEec-ceeEEe
Q 010579 239 DTFHLGIFVLVA-AAFFGY 256 (507)
Q Consensus 239 ~G~p~gIa~~~~-a~~~gy 256 (507)
...|.+|++... ..+++.
T Consensus 224 ~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp TCCEEEEEECSTTCEEEEE
T ss_pred CCCceeEEECCCCCEEEec
Confidence 345777877643 344443
No 40
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.21 E-value=6.1e-10 Score=110.45 Aligned_cols=117 Identities=11% Similarity=0.072 Sum_probs=87.1
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
..|.+|+++++|+ |||+|..+++|++++.++...+...++.. +..|.||++|++|+||||+.
T Consensus 185 ~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-----------------~~gP~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-----------------IPNPGNIKRNADGHFWVSSS 247 (322)
T ss_dssp SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-----------------CSSEEEEEECTTSCEEEEEE
T ss_pred ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-----------------CCCCCCeEECCCCCEEEEec
Confidence 4799999999986 99999999999999987433233333221 11299999999999999997
Q ss_pred C----------CCeEEEEcCCC-c-EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 162 M----------NMAIRKISDTG-V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 162 ~----------N~rIrk~d~~G-V-stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
. +++|.+|+.+| + ..+.. . ++ ..+..|.+++. .++.|||++..+++|.+++++
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~--------~g----~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNILEVIPL-P--------PP----FAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCEEEEEEC-C--------TT----TTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC-
T ss_pred CcccccccCCCccEEEEECCCCCEEEEEEC-C--------CC----CccccceEEEE--eCCEEEEeecCCCceEEEecc
Confidence 6 67899999888 3 33321 1 11 12667888874 578999999999999999986
Q ss_pred CC
Q 010579 230 DD 231 (507)
Q Consensus 230 ~~ 231 (507)
..
T Consensus 313 ~~ 314 (322)
T 2fp8_A 313 KK 314 (322)
T ss_dssp --
T ss_pred cc
Confidence 43
No 41
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=4.1e-09 Score=102.29 Aligned_cols=136 Identities=15% Similarity=0.201 Sum_probs=99.6
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..|.+|+++++|+|||++..+++|.+++.. .+++..+.... . ...++.|++|++|++|+|||+|..
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~---~g~~~~~~~~~-------~----~~~~~~~~~i~~d~~G~l~vtd~~ 134 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREP---GGEWESIADSF-------E----GKKLNSPNDVCLAPDGSLWFSDPT 134 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECST---TCCEEEEECEE-------T----TEECCCCCCEEECTTSCEEEEECS
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCC---CCcEEEEeecc-------C----CCCCCCCCCEEECCCCCEEEECCc
Confidence 369999999999999999998999999984 25555554321 0 124678999999999999999862
Q ss_pred -----------------CCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEE
Q 010579 163 -----------------NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIR 224 (507)
Q Consensus 163 -----------------N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr 224 (507)
..+|.+++.+| +..+.. .+..|++|++ +++++++|+|..+++|+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~-----------------~~~~~~gi~~-s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIR-----------------DRVKPNGLAF-LPSGNLLVSDTGDNATH 196 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEEC-----------------CCSSEEEEEE-CTTSCEEEEETTTTEEE
T ss_pred cccccccccccccccCCCcEEEEECCCCCEEEeec-----------------CCCCCccEEE-CCCCCEEEEeCCCCeEE
Confidence 45899999777 444432 2456889985 77777669999999999
Q ss_pred EEECCC-Cce-----eeCCCCCccceEEEEec
Q 010579 225 EIQLHD-DDC-----SDNYDDTFHLGIFVLVA 250 (507)
Q Consensus 225 ~I~l~~-~~~-----~~~~~~G~p~gIa~~~~ 250 (507)
++++.. +.+ ......+.|.+|+++..
T Consensus 197 ~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp EEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred EEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 999862 222 11223456788887654
No 42
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.16 E-value=9.3e-10 Score=108.88 Aligned_cols=113 Identities=19% Similarity=0.162 Sum_probs=86.5
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..|.+|+++++|+|||+|..+++|++++++ +....++..+ ..|.+|+++++|+|||||..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~----g~~~~~~~~~----------------~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPD----GNQQIHATVE----------------GKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEEECS----------------SEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCC----CceEEEEeCC----------------CCceeEEEcCCCcEEEEecc
Confidence 379999999999999999999999999987 3344443221 25999999999999999987
Q ss_pred CC--eEEEEc-CCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 163 NM--AIRKIS-DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 163 N~--rIrk~d-~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
++ +|.+++ .+| +..++... ....|.+++ +..++.+||+|..+++|+++++.+.
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~---------------~~~~~~g~~-~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLP---------------DAIFLNGIT-PLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECT---------------TCSCEEEEE-ESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCcceEEEEcCCCCeEEEEEeCC---------------CccccCccc-ccCCCcEEEEECCCCeEEEEeCCCC
Confidence 54 588887 455 65554311 123467777 4678889999999999999998753
No 43
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.16 E-value=6.9e-09 Score=102.62 Aligned_cols=140 Identities=12% Similarity=0.026 Sum_probs=97.3
Q ss_pred CeeEEEEcCCCcEEEEeCCCC--eEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDSENS--NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~--rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
.|.+|+++++|+|||+|..++ +|++++.. .+.+..++... ....|.|+++.+++.+||+|.
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~---~g~~~~~~~~~--------------~~~~~~g~~~~~~~~~~v~d~ 135 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKS---DGTVETLLTLP--------------DAIFLNGITPLSDTQYLTADS 135 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECT---TSCEEEEEECT--------------TCSCEEEEEESSSSEEEEEET
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCC---CCeEEEEEeCC--------------CccccCcccccCCCcEEEEEC
Confidence 699999999999999997654 59998865 36666665432 134578999988888999999
Q ss_pred CCCeEEEEcCCC----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC-cee--
Q 010579 162 MNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD-DCS-- 234 (507)
Q Consensus 162 ~N~rIrk~d~~G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~-~~~-- 234 (507)
.+++|++++.++ +....+. .. . ......|..|++| ..+.+.|||+|+.+++|++|+++.. ...
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~--~~-~-----~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPM--LA-R-----SNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGG--GS-C-----SSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CCCeEEEEeCCCCcEeEEEECCc--cc-c-----ccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 999999999753 2222211 00 0 0112346789998 3456799999999999999998752 111
Q ss_pred -eCCCCCccceEEEEec
Q 010579 235 -DNYDDTFHLGIFVLVA 250 (507)
Q Consensus 235 -~~~~~G~p~gIa~~~~ 250 (507)
.......|.+|+++..
T Consensus 206 ~~~~~~~~P~gi~vd~d 222 (306)
T 2p4o_A 206 EIFVEQTNIDDFAFDVE 222 (306)
T ss_dssp EEEEESCCCSSEEEBTT
T ss_pred EEEeccCCCCCeEECCC
Confidence 1111246888988864
No 44
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.14 E-value=1e-09 Score=112.15 Aligned_cols=163 Identities=10% Similarity=0.065 Sum_probs=96.2
Q ss_pred CCeeEEEEcCC----CcEEEEeCCC-----CeEEEEeCCCCCCCccEEEec-CCCCccccCCCCcccccCCCcceEEEcC
Q 010579 83 MEPFSVAVSPS----GELLVLDSEN-----SNIYKISTSLSPYSRPKLVAG-SPEGYYGHVDGRPRGARMNHPKGLAVDD 152 (507)
Q Consensus 83 ~~P~gIaVd~d----G~LYVaDs~n-----~rI~ki~~~g~~~g~i~~vaG-~~~G~~G~~dG~~~~a~fn~P~GIaVd~ 152 (507)
..|.+|+++++ |.|||++..+ ++|.+++.++.......+++. .+. .......|.+|++++
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~----------~~~~~h~~~~l~~~p 144 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA----------RPHGLHSGGRIAFGP 144 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC----------CTTCCCCCCCEEECT
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC----------CCCCCcCCceEEECC
Confidence 57999999997 8899999865 799999976321112222221 110 011346788999999
Q ss_pred CCCEEEEeCC-------------CCeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC
Q 010579 153 RGNIYIADTM-------------NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG 219 (507)
Q Consensus 153 dGnIYVADs~-------------N~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g 219 (507)
||+|||++.. +.+|.+|+.+|- +..+....+........-...+.+|++|++.+.++.|||+|.+
T Consensus 145 dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~--~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 145 DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE--PAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS--BCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEEC
T ss_pred CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC--CCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcC
Confidence 9999999742 358999998771 1111000000000001111236789999964448999999999
Q ss_pred CCe--------EEEEECCCCc----ee-------------eCCCCCccceEEEEecceeEEeh
Q 010579 220 NQA--------IREIQLHDDD----CS-------------DNYDDTFHLGIFVLVAAAFFGYM 257 (507)
Q Consensus 220 n~r--------Ir~I~l~~~~----~~-------------~~~~~G~p~gIa~~~~a~~~gy~ 257 (507)
+++ |.+|...++. |. .......|.|+++..+..|++..
T Consensus 223 ~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~ 285 (352)
T 2ism_A 223 PSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGL 285 (352)
T ss_dssp C------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEETTEEEEEET
T ss_pred CCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEECCEEEEEEC
Confidence 887 6666543210 00 01112347788887666666553
No 45
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.09 E-value=4.4e-09 Score=103.22 Aligned_cols=134 Identities=12% Similarity=0.080 Sum_probs=95.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC-
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM- 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~- 162 (507)
.|.+|+++++|+|||+. .++|++++.. .+.+..++.... + ..++.|++|++|++|+|||++..
T Consensus 55 ~~~~i~~~~dG~l~v~~--~~~l~~~d~~---~g~~~~~~~~~~-------~----~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 55 PVSSVALRQSGGYVATI--GTKFCALNWK---EQSAVVLATVDN-------D----KKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp CEEEEEEBTTSSEEEEE--TTEEEEEETT---TTEEEEEEECCT-------T----CSSEEEEEEEECTTSCEEEEEEEC
T ss_pred ceEEEEECCCCCEEEEE--CCeEEEEECC---CCcEEEEEecCC-------C----CCCCCCCCEEECCCCCEEEecCCc
Confidence 68999999999999997 5799999987 356665553321 1 13567999999999999999843
Q ss_pred ----------CCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC--
Q 010579 163 ----------NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH-- 229 (507)
Q Consensus 163 ----------N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~-- 229 (507)
..+|.+++.+| +..+.. .+..|++|++.++...|||+|+.+++|++++.+
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~g~~~~~~~-----------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~ 181 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPDHHVKKYFD-----------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ 181 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTTSCEEEEEE-----------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTT
T ss_pred ccccccccCCCcEEEEEECCCCEEEEee-----------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCC
Confidence 35799999877 444321 245688999644444699999999999999874
Q ss_pred CCcee-------eCCCCCccceEEEEec
Q 010579 230 DDDCS-------DNYDDTFHLGIFVLVA 250 (507)
Q Consensus 230 ~~~~~-------~~~~~G~p~gIa~~~~ 250 (507)
..... .....+.|.+++++..
T Consensus 182 ~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 182 TGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp TCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred CCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 22221 1122357888888654
No 46
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=8.5e-09 Score=101.40 Aligned_cols=136 Identities=17% Similarity=0.246 Sum_probs=99.1
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..|.+++++++|+||+++..+++|.+++.+ +.+..++... .+ ..++.|++|++|++|+|||+|..
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~----g~~~~~~~~~-------~~----~~~~~~~~i~~d~dG~l~~td~~ 150 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD----GQAHLLVGRY-------AG----KRLNSPNDLIVARDGAIWFTDPP 150 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEECEE-------TT----EECSCCCCEEECTTSCEEEECCS
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC----CCEEEEEecc-------CC----CccCCCCCEEECCCCCEEEeCcC
Confidence 369999999999999999998999999986 5555554321 11 24788999999999999999851
Q ss_pred -----------------CCeEEEEcC-CC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC-eEEEEeCCC--
Q 010579 163 -----------------NMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGN-- 220 (507)
Q Consensus 163 -----------------N~rIrk~d~-~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G-~LyVaD~gn-- 220 (507)
...|.+++. .| +..+. .+..|+++++ ++++ .|||+|+.+
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------------------~~~~p~gl~~-spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 151 FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------------------DLDHPNGLAF-SPDEQTLYVSQTPEQG 211 (305)
T ss_dssp GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------------------EESSEEEEEE-CTTSSEEEEEECCC--
T ss_pred CCccccccccccccccCCCeEEEEcCCCCcEEEEe------------------cCCCCcceEE-cCCCCEEEEEecCCcC
Confidence 357899986 44 55442 1347889986 5555 599999974
Q ss_pred ---CeEEEEECCCCcee-----eCCCCCccceEEEEecce
Q 010579 221 ---QAIREIQLHDDDCS-----DNYDDTFHLGIFVLVAAA 252 (507)
Q Consensus 221 ---~rIr~I~l~~~~~~-----~~~~~G~p~gIa~~~~a~ 252 (507)
++|++++++.+... .....+.|.+|+++....
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW 251 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC
T ss_pred CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC
Confidence 89999998754311 122356788888775433
No 47
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.06 E-value=5e-09 Score=101.64 Aligned_cols=136 Identities=14% Similarity=0.125 Sum_probs=101.9
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
..|.+++++++|+ ||++|..+++|+++++.+ + ...+... ...|.+|+++++|+|||++.
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---~-~~~~~~~----------------~~~~~~l~~~~dg~l~v~~~ 87 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---Q-LSPEMHP----------------SHHQNGHCLNKQGHLIACSH 87 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---C-EEEEESS----------------CSSEEEEEECTTCCEEEEET
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCC---C-eEEEECC----------------CCCcceeeECCCCcEEEEec
Confidence 4699999999998 999999999999999873 3 4444321 24689999999999999999
Q ss_pred CCCeEEEEcC-CC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC-----------------CCCe
Q 010579 162 MNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-----------------GNQA 222 (507)
Q Consensus 162 ~N~rIrk~d~-~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~-----------------gn~r 222 (507)
.+++|.+++. +| +..+.... ....++.|++|+ ++++|+|||+|. ..++
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~~~------------~~~~~~~~~~i~-~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 88 GLRRLERQREPGGEWESIADSF------------EGKKLNSPNDVC-LAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp TTTEEEEECSTTCCEEEEECEE------------TTEECCCCCCEE-ECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred CCCeEEEEcCCCCcEEEEeecc------------CCCCCCCCCCEE-ECCCCCEEEECCccccccccccccccccCCCcE
Confidence 9999999996 66 55443211 112356789998 588999999976 2468
Q ss_pred EEEEECCCCceeeCCCCCccceEEEEecc
Q 010579 223 IREIQLHDDDCSDNYDDTFHLGIFVLVAA 251 (507)
Q Consensus 223 Ir~I~l~~~~~~~~~~~G~p~gIa~~~~a 251 (507)
|+++++.+...........|.+|++....
T Consensus 155 l~~~~~~g~~~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 155 VFRLAPDGTLSAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp EEEECTTSCEEEEECCCSSEEEEEECTTS
T ss_pred EEEECCCCCEEEeecCCCCCccEEECCCC
Confidence 99999874433334455678888886543
No 48
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.02 E-value=1.2e-08 Score=100.24 Aligned_cols=131 Identities=10% Similarity=0.078 Sum_probs=93.4
Q ss_pred CCeeEEEEcCCCcEEEEeC-----------CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEc
Q 010579 83 MEPFSVAVSPSGELLVLDS-----------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 151 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs-----------~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd 151 (507)
..|+++++|++|+|||++. ..++|++++.+ +.+..+.. .+..|+||+++
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~----g~~~~~~~----------------~~~~pngi~~s 157 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD----HHVKKYFD----------------QVDISNGLDWS 157 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT----SCEEEEEE----------------EESBEEEEEEC
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC----CCEEEEee----------------ccccccceEEc
Confidence 5689999999999999984 34689999876 44443332 25679999999
Q ss_pred CCCC-EEEEeCCCCeEEEEc---CCC-cE---EEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeE
Q 010579 152 DRGN-IYIADTMNMAIRKIS---DTG-VT---TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAI 223 (507)
Q Consensus 152 ~dGn-IYVADs~N~rIrk~d---~~G-Vs---tIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rI 223 (507)
++|+ |||+|+.+++|.+++ .+| +. .++... .....|.+|+ +|.+|+|||++.++++|
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~--------------~~~~~p~g~~-~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE--------------KEEQIPDGMC-IDAEGKLWVACYNGGRV 222 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC--------------GGGCEEEEEE-EBTTSCEEEEEETTTEE
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC--------------CCCCCCCeeE-ECCCCCEEEEEcCCCEE
Confidence 9997 999999999999997 344 21 121100 0123688998 58899999999999999
Q ss_pred EEEECCCCceee-C-CCCCccceEEEE
Q 010579 224 REIQLHDDDCSD-N-YDDTFHLGIFVL 248 (507)
Q Consensus 224 r~I~l~~~~~~~-~-~~~G~p~gIa~~ 248 (507)
.+++++++.+.. . .....|+++++.
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred EEEcCCCceEEEEEECCCCCceEEEEe
Confidence 999998544332 2 222356666664
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.00 E-value=1.3e-08 Score=101.68 Aligned_cols=134 Identities=8% Similarity=0.134 Sum_probs=91.0
Q ss_pred CCeeEEEEcCCCcEEEEeCCC----------CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC
Q 010579 83 MEPFSVAVSPSGELLVLDSEN----------SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD 152 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n----------~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~ 152 (507)
..|.+|+++++|+|||++..+ ++|.+|++.+ +++......+ .| ..|.+|++++
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~-------~g-------~~p~~la~~~ 234 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFK-------LG-------DWPSEVQLNG 234 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECC-------TT-------CCCEEEEECT
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC---CeEEEEEecC-------CC-------CCceeEEEec
Confidence 369999999999999999876 8999999862 4443222211 01 3799999999
Q ss_pred CCC-EEEEeCCCCeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEe----CCCCeEEEEE
Q 010579 153 RGN-IYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID----RGNQAIREIQ 227 (507)
Q Consensus 153 dGn-IYVADs~N~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD----~gn~rIr~I~ 227 (507)
+|. |||++. .|.++|...-.... .. . .. .....|.+|++.+.++.|||++ ..+++|.+|+
T Consensus 235 d~~~lyv~~~---~v~~~d~~t~~~~~-~~----~--~~-----~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 235 TRDTLYWINN---DIWRMPVEADRVPV-RP----F--LE-----FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp TSCEEEEESS---SEEEEETTCSSCCS-SC----S--BC-----CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred CCCEEEEEcc---EEEEEECCCCceee-ee----e--ec-----CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 765 999986 79999964411110 00 0 00 0145799998644589999999 8899999999
Q ss_pred CCCCceeeCCCCCccceEEEE
Q 010579 228 LHDDDCSDNYDDTFHLGIFVL 248 (507)
Q Consensus 228 l~~~~~~~~~~~G~p~gIa~~ 248 (507)
+++...........|.+|+.-
T Consensus 300 ~~g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 300 PQGKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp TTCCEEEEEEEEESEEEEEEE
T ss_pred CCCCEEEEEEeccCcceEEEe
Confidence 985444332222346666654
No 50
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.00 E-value=7.9e-09 Score=101.63 Aligned_cols=134 Identities=12% Similarity=0.102 Sum_probs=100.4
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.+.+++++++|+ ||++|..+++|++++.+ +....+... -..|+++++|++|+|||++..
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~----g~~~~~~~~----------------~~~~~gl~~d~dG~l~v~~~~ 105 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRED----GTVDVLLDA----------------TAFTNGNAVDAQQRLVHCEHG 105 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETT----SCEEEEEES----------------CSCEEEEEECTTSCEEEEETT
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCC----CCEEEEeCC----------------CCccceeeECCCCCEEEEECC
Confidence 688999999987 99999999999999886 444444321 136899999999999999999
Q ss_pred CCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC-----------------CCCeEE
Q 010579 163 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-----------------GNQAIR 224 (507)
Q Consensus 163 N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~-----------------gn~rIr 224 (507)
+++|.+++.+| +++++.... ...++.|++|+ ++++|+|||+|. ..+.|.
T Consensus 106 ~~~v~~~~~~g~~~~~~~~~~------------~~~~~~~~~i~-~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~ 172 (305)
T 3dr2_A 106 RRAITRSDADGQAHLLVGRYA------------GKRLNSPNDLI-VARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVY 172 (305)
T ss_dssp TTEEEEECTTSCEEEEECEET------------TEECSCCCCEE-ECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEE
T ss_pred CCEEEEECCCCCEEEEEeccC------------CCccCCCCCEE-ECCCCCEEEeCcCCCccccccccccccccCCCeEE
Confidence 99999999778 555543211 12467899998 588999999984 246899
Q ss_pred EEECCCCceeeCCCCCccceEEEEec
Q 010579 225 EIQLHDDDCSDNYDDTFHLGIFVLVA 250 (507)
Q Consensus 225 ~I~l~~~~~~~~~~~G~p~gIa~~~~ 250 (507)
++++.++.+........|+++++...
T Consensus 173 ~~d~~~g~~~~~~~~~~p~gl~~spd 198 (305)
T 3dr2_A 173 RLPPDGSPLQRMADLDHPNGLAFSPD 198 (305)
T ss_dssp EECSSSCCCEEEEEESSEEEEEECTT
T ss_pred EEcCCCCcEEEEecCCCCcceEEcCC
Confidence 99986544332113446788887654
No 51
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.97 E-value=5.9e-08 Score=96.99 Aligned_cols=161 Identities=11% Similarity=0.085 Sum_probs=110.1
Q ss_pred EEecCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc
Q 010579 39 VVSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR 118 (507)
Q Consensus 39 va~ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~ 118 (507)
++....+.|.++|..+++.. ... . .+..|.+|+++++|.|||++...++|.+|++.+ ++
T Consensus 58 v~~~~~~~v~viD~~t~~~~--------------~~i-~---~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t---~~ 116 (328)
T 3dsm_A 58 IVVNNSHVIFAIDINTFKEV--------------GRI-T---GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT---YE 116 (328)
T ss_dssp EEEGGGTEEEEEETTTCCEE--------------EEE-E---CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT---TE
T ss_pred EEEcCCCEEEEEECcccEEE--------------EEc-C---CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC---Ce
Confidence 44445566666676665543 111 1 124799999988899999997789999999872 44
Q ss_pred cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC-CCeEEEEcCCC---cEEEecCcccCCCCCCCCCcc
Q 010579 119 PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM-NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSE 194 (507)
Q Consensus 119 i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~-N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~ 194 (507)
+...+..+. ...++..|.+|++ .++.|||++.+ .++|.+||... +.++..+
T Consensus 117 ~~~~i~~g~----------~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-------------- 171 (328)
T 3dsm_A 117 ITGYIECPD----------MDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-------------- 171 (328)
T ss_dssp EEEEEECTT----------CCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS--------------
T ss_pred EEEEEEcCC----------ccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC--------------
Confidence 432222110 0123568999999 57889999984 88999999653 3344211
Q ss_pred CccCCCCceEEEEcCCCeEEEEeCCC----------CeEEEEECCCCceee--CCC-CCccceEEEEec
Q 010579 195 DAKFSNDFDVVYVGSSCSLLVIDRGN----------QAIREIQLHDDDCSD--NYD-DTFHLGIFVLVA 250 (507)
Q Consensus 195 ~a~f~~P~gIa~vd~~G~LyVaD~gn----------~rIr~I~l~~~~~~~--~~~-~G~p~gIa~~~~ 250 (507)
..|.+|+ .+.+|+|||++.++ +.|.+|++.+..+.. ... ...|.++++...
T Consensus 172 ----~~p~~i~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d 235 (328)
T 3dsm_A 172 ----IQPTSLV-MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT 235 (328)
T ss_dssp ----SCBCCCE-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT
T ss_pred ----CCccceE-EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC
Confidence 2578887 58899999999986 899999998766542 111 236889998853
No 52
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.90 E-value=3.4e-08 Score=100.89 Aligned_cols=148 Identities=16% Similarity=0.155 Sum_probs=97.9
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC----CCEEE
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR----GNIYI 158 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d----GnIYV 158 (507)
..|.+|+++++|+|||+|.. ++|++++ + +....++..... ...+..|.||+++++ |.|||
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~-g~I~~i~-~----g~~~~~~~~~v~----------~~g~~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERP-GRIRLFR-E----GRLSTYAELSVY----------HRGESGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp SCEEEEEECTTSCEEEEETT-TEEEEEE-T----TEEEEEEECCCC----------CSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCceEEEEcCCCeEEEEeCC-CeEEEEE-C----CCccEeecceEe----------ecCCCCceeEEECCCCCCCCEEEE
Confidence 47999999999999999986 8999998 5 444555433200 112568999999997 78999
Q ss_pred EeCCC-----CeEEEEcCCC--c---EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC----------
Q 010579 159 ADTMN-----MAIRKISDTG--V---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR---------- 218 (507)
Q Consensus 159 ADs~N-----~rIrk~d~~G--V---stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~---------- 218 (507)
+++.+ ++|.+++.++ + .++..+. +........|.+|+ ++++|.|||++.
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~----------p~~~~~~h~~~~l~-~~pdG~Lyv~~G~~~~~~~~~d 163 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGI----------PARPHGLHSGGRIA-FGPDGMLYVTTGEVYERELAQD 163 (352)
T ss_dssp EEEECTTSSEEEEEEEEECSSCEEEEEEEEEEE----------CCCTTCCCCCCCEE-ECTTSCEEEECCCTTCGGGGGC
T ss_pred EEecCCCCCccEEEEEEeCCCCcCceEEEEEeC----------CCCCCCCcCCceEE-ECCCCCEEEEECCCCCCccccC
Confidence 99865 7899998543 2 2222110 00011245678888 588999999973
Q ss_pred ---CCCeEEEEECCCCc--------------eeeCCCCCccceEEEEe--cceeEEeh
Q 010579 219 ---GNQAIREIQLHDDD--------------CSDNYDDTFHLGIFVLV--AAAFFGYM 257 (507)
Q Consensus 219 ---gn~rIr~I~l~~~~--------------~~~~~~~G~p~gIa~~~--~a~~~gy~ 257 (507)
..++|.+|++++.. -.+..+...|.||++.. +..|+.+.
T Consensus 164 ~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 164 LASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp TTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEE
T ss_pred CCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEc
Confidence 23799999988621 11112223477888875 34455543
No 53
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.90 E-value=8e-08 Score=92.72 Aligned_cols=114 Identities=16% Similarity=0.230 Sum_probs=84.7
Q ss_pred CCeeEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCccEEE-ecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEe
Q 010579 83 MEPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRPKLV-AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~d-G~LYVaDs~n~rI~ki~~~g~~~g~i~~v-aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVAD 160 (507)
..|.+|+++++ |+|||++..+ .|++++.+ +++..+ .... .+ ..++.|.+|++|++|+|||++
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~-~l~~~d~~----g~~~~~~~~~~-------~~----~~~~~~~~i~~d~~g~l~v~~ 134 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRL-GLLVVQTD----GTFEEIAKKDS-------EG----RRMQGCNDCAFDYEGNLWITA 134 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTT-EEEEEETT----SCEEECCSBCT-------TS----CBCBCCCEEEECTTSCEEEEE
T ss_pred CCCceEEEecCCCcEEEEECCC-CEEEEeCC----CCEEEEEeccC-------CC----ccccCCcCEEECCCCCEEEEe
Confidence 36999999999 9999999754 89999986 444443 3211 00 135679999999999999999
Q ss_pred CCC---------------CeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEE---cCCC-eEEEEeCCC
Q 010579 161 TMN---------------MAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV---GSSC-SLLVIDRGN 220 (507)
Q Consensus 161 s~N---------------~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~v---d~~G-~LyVaD~gn 220 (507)
..+ .+|.+++.++ +..+.. .+..|.++++. +.++ .|||+|..+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~-----------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~ 197 (314)
T 1pjx_A 135 PAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDT-----------------AFQFPNGIAVRHMNDGRPYQLIVAETPT 197 (314)
T ss_dssp CBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEE-----------------EESSEEEEEEEECTTSCEEEEEEEETTT
T ss_pred cCcccccccccccccCCCCeEEEECCCCCEEEecc-----------------CCCCcceEEEecccCCCCCEEEEEECCC
Confidence 865 6899999767 433321 13467888864 0555 799999999
Q ss_pred CeEEEEECC
Q 010579 221 QAIREIQLH 229 (507)
Q Consensus 221 ~rIr~I~l~ 229 (507)
++|++++++
T Consensus 198 ~~i~~~~~~ 206 (314)
T 1pjx_A 198 KKLWSYDIK 206 (314)
T ss_dssp TEEEEEEEE
T ss_pred CeEEEEECC
Confidence 999999975
No 54
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.87 E-value=6.5e-08 Score=99.12 Aligned_cols=127 Identities=15% Similarity=0.192 Sum_probs=81.8
Q ss_pred CCeeEEEEcCC----CcEEEEeCC---C----CeEEEEeCCCCC--CCccEEEe-cCCCCccccCCCCcccccCCCcceE
Q 010579 83 MEPFSVAVSPS----GELLVLDSE---N----SNIYKISTSLSP--YSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGL 148 (507)
Q Consensus 83 ~~P~gIaVd~d----G~LYVaDs~---n----~rI~ki~~~g~~--~g~i~~va-G~~~G~~G~~dG~~~~a~fn~P~GI 148 (507)
..|.+|+++|+ |.|||++.. + ++|.+++.++.. .....+++ +.+ ......|.+|
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~l 140 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGRI 140 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCCE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCceE
Confidence 46999999996 899999974 3 799999876321 01122222 111 0124578899
Q ss_pred EEcCCCCEEEEeCC-------------CCeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEE
Q 010579 149 AVDDRGNIYIADTM-------------NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 215 (507)
Q Consensus 149 aVd~dGnIYVADs~-------------N~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyV 215 (507)
++++||.|||++.. +.+|.+|+.+|- +..+. .+.....-...+.+|++|++.+.+|.|||
T Consensus 141 ~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~--~p~~n-----pf~~~~i~a~G~rnp~Gla~d~~~g~l~v 213 (354)
T 3a9g_A 141 RFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR--PPADN-----PFPNSPIWSYGHRNPQGIDWHRASGVMVA 213 (354)
T ss_dssp EECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC--CCTTS-----SSTTCCEEEECCSCCCEEEECTTTCCEEE
T ss_pred EECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC--CCCCC-----CCCCCcEEEEccCCcceEEEeCCCCCEEE
Confidence 99999999999642 358999998771 11000 00001111123678999996444899999
Q ss_pred EeCCCCe---EEEEEC
Q 010579 216 IDRGNQA---IREIQL 228 (507)
Q Consensus 216 aD~gn~r---Ir~I~l 228 (507)
+|.+.++ |.+|..
T Consensus 214 ~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 214 TEHGPVGHDEVNIILK 229 (354)
T ss_dssp EECCSSSCCEEEEECT
T ss_pred EecCCCCCcEEEEecC
Confidence 9998875 666653
No 55
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.86 E-value=5.3e-08 Score=99.80 Aligned_cols=157 Identities=19% Similarity=0.135 Sum_probs=101.6
Q ss_pred CeeeEEeecCCCCCCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceE
Q 010579 69 GYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGL 148 (507)
Q Consensus 69 G~~~~~~~~G~~~~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GI 148 (507)
++.++.+..+ +..|.+|+++++|+|||+|.. ++|++++.+ +. ..+.... .. ......|.||
T Consensus 18 ~~~~~~va~~---l~~P~~ia~~pdG~l~V~e~~-g~I~~~d~~----G~-~~~~~~~--v~--------~~g~~g~~gi 78 (354)
T 3a9g_A 18 KFKISEVASD---LEVPWSIAPLGGGRYLVTERP-GRLVLISPS----GK-KLVASFD--VA--------NVGEAGLLGL 78 (354)
T ss_dssp CEEEEEEECS---CSCEEEEEEEETTEEEEEETT-TEEEEECSS----CE-EEEEECC--CC--------CSTTCSEEEE
T ss_pred CeEEEEEeCC---CCCCeEEEEcCCCeEEEEeCC-CEEEEEeCC----Cc-eEeeccc--ee--------ecCCCceeeE
Confidence 3444444432 357999999999999999987 899999865 54 4454322 00 0124579999
Q ss_pred EEcCC----CCEEEEeCC---C----CeEEEEcCCC-------cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCC
Q 010579 149 AVDDR----GNIYIADTM---N----MAIRKISDTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS 210 (507)
Q Consensus 149 aVd~d----GnIYVADs~---N----~rIrk~d~~G-------VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~ 210 (507)
+++++ |.|||+++. + ++|.+++.++ ..++..+.. ......|.+|+ .+++
T Consensus 79 a~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~l~-~~pD 145 (354)
T 3a9g_A 79 ALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGRIR-FGPD 145 (354)
T ss_dssp EECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCCEE-ECTT
T ss_pred EeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCceEE-ECCC
Confidence 99996 889999974 3 7899988432 122221110 11234678888 5889
Q ss_pred CeEEEEeC-------------CCCeEEEEECCCCc---------eeeCCCCCccceEEEEe--cceeEEeh
Q 010579 211 CSLLVIDR-------------GNQAIREIQLHDDD---------CSDNYDDTFHLGIFVLV--AAAFFGYM 257 (507)
Q Consensus 211 G~LyVaD~-------------gn~rIr~I~l~~~~---------~~~~~~~G~p~gIa~~~--~a~~~gy~ 257 (507)
|.|||++. .+++|.+|++++.. -.+..+.-.|.||++.. +..|+.+.
T Consensus 146 G~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 146 GMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp SCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEEC
T ss_pred CcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEec
Confidence 99999963 24689999988741 12222333477888875 34455443
No 56
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.85 E-value=4.9e-08 Score=98.03 Aligned_cols=158 Identities=16% Similarity=0.095 Sum_probs=98.2
Q ss_pred CCCCeeEEEEcCCCcEEEEeCC-----CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CC
Q 010579 81 FGMEPFSVAVSPSGELLVLDSE-----NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RG 154 (507)
Q Consensus 81 ~~~~P~gIaVd~dG~LYVaDs~-----n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dG 154 (507)
.+..|.+|++|++|+|||+|.+ .++|.++++. .+++...+..+... + .....|++|++|+ +|
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~---tg~~~~~~~~~~~~-----~----~~~~~~~~v~vd~~~g 132 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL---NNQLSRVIYLPPPI-----T----LSNSFVNDLAVDLIHN 132 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT---TTEEEEEEECCTTT-----S----CTTCCCCEEEEETTTT
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC---CCeEEEEEECChhh-----c----ccccccceEEEecCCC
Confidence 4568999999999999999987 5899999986 35533222211000 0 1235789999996 57
Q ss_pred CEEEEeC---CCCeEEEEcCC-C-cEEEecCcccCCC----CCCCCCc-----cCc----cCCCCceEEEEcCCCeEEEE
Q 010579 155 NIYIADT---MNMAIRKISDT-G-VTTIAGGKWSRGV----GHVDGPS-----EDA----KFSNDFDVVYVGSSCSLLVI 216 (507)
Q Consensus 155 nIYVADs---~N~rIrk~d~~-G-VstIaGG~~g~~~----G~~dg~~-----~~a----~f~~P~gIa~vd~~G~LyVa 216 (507)
.+||+|. .++.|.+++.. | +..+..+...... -..+|.. ... ....|++|++.++...||++
T Consensus 133 ~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~ 212 (343)
T 2qe8_A 133 FVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLS 212 (343)
T ss_dssp EEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEE
T ss_pred EEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEE
Confidence 8999999 88999999954 4 4443322100000 0001100 000 01358899964444479999
Q ss_pred eCCCCeEEEEECCC---Cc---------eeeCCCCCccceEEEEec
Q 010579 217 DRGNQAIREIQLHD---DD---------CSDNYDDTFHLGIFVLVA 250 (507)
Q Consensus 217 D~gn~rIr~I~l~~---~~---------~~~~~~~G~p~gIa~~~~ 250 (507)
+..+++|++++... .. .......+.|.||+++..
T Consensus 213 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 213 PMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD 258 (343)
T ss_dssp ESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT
T ss_pred eCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC
Confidence 99999999998531 10 011122357889998764
No 57
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.84 E-value=4.9e-08 Score=100.21 Aligned_cols=137 Identities=17% Similarity=0.148 Sum_probs=90.0
Q ss_pred CCeeEEEE---cCCCcEEE-EeC------------CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcc
Q 010579 83 MEPFSVAV---SPSGELLV-LDS------------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK 146 (507)
Q Consensus 83 ~~P~gIaV---d~dG~LYV-aDs------------~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~ 146 (507)
..|.||.+ |++|.||| +|. +.+.|.+++++++.+++....+.-..-..+. -......+..|+
T Consensus 63 ~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~--~~~~g~~~~~~n 140 (334)
T 2p9w_A 63 QQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEF--EKKAGKRPFGVV 140 (334)
T ss_dssp EEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHH--HHHHSSCCEEEE
T ss_pred ceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccc--cccccccccCCc
Confidence 36899999 78999998 562 3578999998744434444433221000000 000001244689
Q ss_pred eEEEcCCCCEEEEeCCC-CeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEE
Q 010579 147 GLAVDDRGNIYIADTMN-MAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIRE 225 (507)
Q Consensus 147 GIaVd~dGnIYVADs~N-~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~ 225 (507)
+|++|++||+||+|+.. ..|.+++.+|....+.... .+ .......++||++.++...|+|++. .++|.+
T Consensus 141 DvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~--------~~-~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~ 210 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWE--------SG-NGGQRPGYSGITFDPHSNKLIAFGG-PRALTA 210 (334)
T ss_dssp EEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEEC--------CC-CSSSCCSCSEEEEETTTTEEEEESS-SSSEEE
T ss_pred eeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeec--------CC-CcccccCcceEEEeCCCCEEEEEcC-CCeEEE
Confidence 99999999999999999 9999999999322221110 00 1123457899998766667888888 999999
Q ss_pred EECCCC
Q 010579 226 IQLHDD 231 (507)
Q Consensus 226 I~l~~~ 231 (507)
|++...
T Consensus 211 fD~~~p 216 (334)
T 2p9w_A 211 FDVSKP 216 (334)
T ss_dssp EECSSS
T ss_pred EcCCCC
Confidence 998853
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.82 E-value=2.2e-07 Score=91.03 Aligned_cols=136 Identities=10% Similarity=0.093 Sum_probs=93.2
Q ss_pred CCeeEEEEcCCCcEEEEeCC------CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-
Q 010579 83 MEPFSVAVSPSGELLVLDSE------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN- 155 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn- 155 (507)
..|.+|+++++|+|||++.. +.+|++++.++ +.+..+.. .+..|.+|+++++|+
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~----------------~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF---RTVTPIIQ----------------NISVANGIALSTDEKV 195 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS---CCEEEEEE----------------EESSEEEEEECTTSSE
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCC---CEEEEeec----------------CCCcccceEECCCCCE
Confidence 57999999999999999875 47899998763 33333321 134689999999997
Q ss_pred EEEEeCCCCeEEEEcC--CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 156 IYIADTMNMAIRKISD--TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 156 IYVADs~N~rIrk~d~--~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
|||+|..+++|++++. +| +..+...... ... ....|.+|+ ++.+|+|||++..+++|+++++++.
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~----~~~------~~~~~~~i~-~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPY----YFT------GHEGPDSCC-IDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE----ECC------SSSEEEEEE-EBTTCCEEEEEETTTEEEEECTTSC
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEE----ecC------CCCCCCceE-ECCCCCEEEEEcCCCEEEEECCCCC
Confidence 9999999999999985 44 2222100000 000 113678887 5889999999999999999998655
Q ss_pred ceeeC-CCC---C---ccceEEEE
Q 010579 232 DCSDN-YDD---T---FHLGIFVL 248 (507)
Q Consensus 232 ~~~~~-~~~---G---~p~gIa~~ 248 (507)
..... ... | .|.++++.
T Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~ 288 (333)
T 2dg1_A 265 PIGQILIPGRDEGHMLRSTHPQFI 288 (333)
T ss_dssp EEEEEECTTGGGTCSCBCCEEEEC
T ss_pred EEEEEEcCCCccccccCcceEEEC
Confidence 43221 111 1 56677764
No 59
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.81 E-value=6.1e-08 Score=93.59 Aligned_cols=138 Identities=14% Similarity=0.190 Sum_probs=96.7
Q ss_pred CCeeEEEEcCCCcEEEE-------eCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-C
Q 010579 83 MEPFSVAVSPSGELLVL-------DSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-G 154 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVa-------Ds~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-G 154 (507)
..|.+++++++|+|||+ |..+++|++++.. .+++..+... .. .+ ....|.+|++|++ |
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~--~~----~~-----~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK---TGKKTVICKP--EV----NG-----YGGIPAGCQCDRDAN 83 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT---TCCEEEEECC--EE----TT-----EECCEEEEEECSSSS
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC---CCcEEEEEec--cc----CC-----CCCCCceEEEecCCC
Confidence 47999999999999999 8888999999965 2555444320 00 00 1357999999999 9
Q ss_pred CEEEEeCCCCeEEEEcCCC-cEEE-ecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCC------------
Q 010579 155 NIYIADTMNMAIRKISDTG-VTTI-AGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN------------ 220 (507)
Q Consensus 155 nIYVADs~N~rIrk~d~~G-VstI-aGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn------------ 220 (507)
+|||++..+ +|.+++.+| +..+ .... ....+..|.+|+ .+.+|+|||++..+
T Consensus 84 ~l~v~~~~~-~l~~~d~~g~~~~~~~~~~------------~~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 84 QLFVADMRL-GLLVVQTDGTFEEIAKKDS------------EGRRMQGCNDCA-FDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp EEEEEETTT-EEEEEETTSCEEECCSBCT------------TSCBCBCCCEEE-ECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred cEEEEECCC-CEEEEeCCCCEEEEEeccC------------CCccccCCcCEE-ECCCCCEEEEecCccccccccccccc
Confidence 999999855 899999667 4333 2110 012346789998 58899999999876
Q ss_pred ---CeEEEEECCCCceeeCCCCCccceEEEE
Q 010579 221 ---QAIREIQLHDDDCSDNYDDTFHLGIFVL 248 (507)
Q Consensus 221 ---~rIr~I~l~~~~~~~~~~~G~p~gIa~~ 248 (507)
+.|.++++++...........|.++++.
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDTAFQFPNGIAVR 180 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEEEESSEEEEEEE
T ss_pred CCCCeEEEECCCCCEEEeccCCCCcceEEEe
Confidence 6899998874322222233457788776
No 60
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.76 E-value=1.3e-06 Score=85.35 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=84.5
Q ss_pred CCeeEEEEcCCCcEEEEeCCC----CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEE
Q 010579 83 MEPFSVAVSPSGELLVLDSEN----SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYI 158 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n----~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYV 158 (507)
..|.+|+++++|+|||++..+ +.|++++.++ +.+..+.... ...+.|.+|++|++|+|||
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~-------------~~~~~~~~i~~d~~g~l~v 150 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG---DNLQDIIEDL-------------STAYCIDDMVFDSKGGFYF 150 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS---CSCEEEECSS-------------SSCCCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC---CEEEEEEccC-------------ccCCcccceEECCCCCEEE
Confidence 479999999999999999876 7999999873 3343222110 0124789999999999999
Q ss_pred EeCC------CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC-eEEEEeCCCCeEEEEECC
Q 010579 159 ADTM------NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 159 ADs~------N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G-~LyVaD~gn~rIr~I~l~ 229 (507)
++.. +.+|.+++.++ +..+.. .+..|.++++ ++++ .|||++..+++|++++++
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~i~~-~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 151 TDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-----------------NISVANGIAL-STDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EECCCBTTBCCEEEEEECTTSCCEEEEEE-----------------EESSEEEEEE-CTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EeccccccCCCceEEEEeCCCCEEEEeec-----------------CCCcccceEE-CCCCCEEEEEeCCCCeEEEEEec
Confidence 9975 46899999664 333321 1335788885 6666 599999999999999985
Q ss_pred C
Q 010579 230 D 230 (507)
Q Consensus 230 ~ 230 (507)
.
T Consensus 213 ~ 213 (333)
T 2dg1_A 213 D 213 (333)
T ss_dssp T
T ss_pred C
Confidence 3
No 61
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.75 E-value=1.4e-07 Score=94.61 Aligned_cols=125 Identities=11% Similarity=0.075 Sum_probs=88.1
Q ss_pred CCeeEEEEcCCCcEEEEeCC--C--CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEE
Q 010579 83 MEPFSVAVSPSGELLVLDSE--N--SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYI 158 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~--n--~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYV 158 (507)
..|.+|+++++|++||+... . .+|.+++ + +.+..+..... + ....|..|.+|++|++|+|||
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~----g~~~~~p~~~~------~---~~~~~~~p~gv~~d~~g~L~v 82 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-Q----DGLIPFPPQSG------N---AIITFDTVLGIKSDGNGIVWM 82 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-T----TEEEESCCCCS------S---CCCCCSCEEEEEECSSSEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-C----CCeecCCCccc------C---cccceeEeeEEEEcCCCcEEE
Confidence 37999999999999999752 2 3888888 4 44332221100 0 123588999999999999999
Q ss_pred EeCC-----CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC---CCCeEEEEE
Q 010579 159 ADTM-----NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR---GNQAIREIQ 227 (507)
Q Consensus 159 ADs~-----N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~---gn~rIr~I~ 227 (507)
+|.+ ..+|.++|.. | +.++..... . ......|++|++...++.+||+|. .++.|.+++
T Consensus 83 ~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-------~----~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 83 LDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-------I----TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp EECHHHHTSCCEEEEEETTTTEEEEEEECCTT-------T----SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred EcCCCCcCCCCeEEEEECCCCeEEEEEECChh-------h----cccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 9987 5899999954 5 344432110 0 012346889996446789999999 899999999
Q ss_pred CCCCc
Q 010579 228 LHDDD 232 (507)
Q Consensus 228 l~~~~ 232 (507)
+.+..
T Consensus 152 ~~~g~ 156 (343)
T 2qe8_A 152 LQTGL 156 (343)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 87543
No 62
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.75 E-value=2.3e-06 Score=83.24 Aligned_cols=141 Identities=18% Similarity=0.214 Sum_probs=92.2
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs 161 (507)
.|.+++++++|. |||++...+.|.+++... +++........+. .........|.+++++++|+ +||++.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKT---GEVKGRLVLDDRK------RTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTT---CCEEEEEESCCCC------CCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCC---CeeEEEEecCCCc------cccccCCCCCceEEECCCCCEEEEEec
Confidence 589999999987 999999999999999863 4433222211000 00011223588999999988 999994
Q ss_pred -CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC-
Q 010579 162 -MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN- 236 (507)
Q Consensus 162 -~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~- 236 (507)
.+++|.++|... +.++... -..|.++++.++...||+++. ++.|..+++........
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNT-----------------GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRK 222 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCC-----------------CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEcCCCCceEEEecCC-----------------CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEE
Confidence 478899999654 2333100 114677887666667888876 68899999887665431
Q ss_pred -C----CCCccceEEEEecc
Q 010579 237 -Y----DDTFHLGIFVLVAA 251 (507)
Q Consensus 237 -~----~~G~p~gIa~~~~a 251 (507)
. ....+.++++....
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg 242 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTAR 242 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTT
T ss_pred EcCCCCCCcccceEEECCCC
Confidence 1 12345667776543
No 63
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.71 E-value=1.2e-07 Score=98.11 Aligned_cols=140 Identities=13% Similarity=0.095 Sum_probs=98.5
Q ss_pred CCeeEEEEcC--CC--cEEEEeCC--CCe--EEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCC
Q 010579 83 MEPFSVAVSP--SG--ELLVLDSE--NSN--IYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 154 (507)
Q Consensus 83 ~~P~gIaVd~--dG--~LYVaDs~--n~r--I~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG 154 (507)
.+|+||.+.. +| +|||++.. +++ |++++.. +...+++... .+ ..|+.|++++++++|
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~----~~~~~~~~~~-------~g----~~~~~pND~~v~~~G 176 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEE----EKSLLHLKTI-------RH----KLLPSVNDIVAVGPE 176 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETT----TTEEEEEEEE-------CC----TTCSSEEEEEEEETT
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECC----CCEEEEEecc-------cc----CCCCCCceEEEeCCC
Confidence 4899999965 45 59999987 455 5555554 2333333221 11 258999999999999
Q ss_pred CEEEEeC-----------------CCCeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEe
Q 010579 155 NIYIADT-----------------MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID 217 (507)
Q Consensus 155 nIYVADs-----------------~N~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD 217 (507)
.+||++. ...+|.+++.+.++.++. .+..|+||++.++...|||+|
T Consensus 177 ~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~-----------------~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 177 HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-----------------GFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEE-----------------EESSEEEEEECTTSSEEEEEE
T ss_pred CEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeec-----------------CCcccCcceECCCCCEEEEEe
Confidence 9999875 235788888755665542 266899999755556899999
Q ss_pred CCCCeEEEEECCCCc-ee---eCCCCCccceEEEEe--cceeE
Q 010579 218 RGNQAIREIQLHDDD-CS---DNYDDTFHLGIFVLV--AAAFF 254 (507)
Q Consensus 218 ~gn~rIr~I~l~~~~-~~---~~~~~G~p~gIa~~~--~a~~~ 254 (507)
+..++|++++++.+. .. .....+.|.|++++. |..++
T Consensus 240 t~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 240 LLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred CCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEE
Confidence 999999999987532 11 113357899999997 44555
No 64
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.64 E-value=2.1e-06 Score=84.34 Aligned_cols=131 Identities=12% Similarity=0.044 Sum_probs=94.2
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
.|.+++++++|+++|++..+++|+.++++ |+..-..+.. ..|.+++++++|+++|++..+
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~----G~~~w~~~~~----------------~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPN----GQLLNSVKLS----------------GTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECS----------------SCCCEEEECTTSCEEEECBTT
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCC----CCEEEEEECC----------------CCccceeEcCCCCEEEEeCCC
Confidence 57788999999999999999999999987 3333222211 257889999999999999999
Q ss_pred CeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC----------CCeEEEEECCC
Q 010579 164 MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG----------NQAIREIQLHD 230 (507)
Q Consensus 164 ~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g----------n~rIr~I~l~~ 230 (507)
++|..||.+ | +..+.... .....|..|.+++ ...+|++||++.. +.++.+|+.++
T Consensus 186 ~~v~~~d~~tG~~~w~~~~~~-----------~~~~~l~~~~~~~-~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 186 HCFVQLNLESNRIVRRVNAND-----------IEGVQLFFVAQLF-PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp SEEEEECTTTCCEEEEEEGGG-----------SBSCCCSEEEEEE-ECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred CeEEEEeCcCCcEEEEecCCC-----------CCCccccccccce-EcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 999999977 7 45553211 0112477889988 5789999999962 44688888766
Q ss_pred Cce-ee--CCCCCccceEE
Q 010579 231 DDC-SD--NYDDTFHLGIF 246 (507)
Q Consensus 231 ~~~-~~--~~~~G~p~gIa 246 (507)
+.+ .+ ....|.+.+|+
T Consensus 254 ~~~W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 254 KVVWQLNDKVKFGMISTIC 272 (276)
T ss_dssp BEEEEECCTTTSCCCCEEE
T ss_pred CEEEEecCcccccceeeee
Confidence 543 12 23344555554
No 65
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.64 E-value=2.4e-06 Score=85.13 Aligned_cols=132 Identities=12% Similarity=0.082 Sum_probs=90.9
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC-
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM- 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~- 162 (507)
.|.+|+++++|++||+. .+.|++++.. .+.+..+..... + ...+.|+++++|++|++||++..
T Consensus 91 ~v~~i~~~~dg~l~v~~--~~gl~~~d~~---~g~~~~~~~~~~-------~----~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS--DDGLFLRDTA---TGVLTLHAELES-------D----LPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp CEEEEEEEETTEEEEEE--TTEEEEEETT---TCCEEEEECSST-------T----CTTEEEEEEEECTTSCEEEEEEET
T ss_pred cceEEEEeCCCeEEEEE--CCCEEEEECC---CCcEEEEeeCCC-------C----CCCCCCCCEEECCCCCEEEEeCCC
Confidence 68899999999999997 4579999986 255555543210 0 12457889999999999999863
Q ss_pred -----CCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC-eEEEEeCCCCeEEEEECC--CC-c
Q 010579 163 -----NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH--DD-D 232 (507)
Q Consensus 163 -----N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G-~LyVaD~gn~rIr~I~l~--~~-~ 232 (507)
..+|.+++ +| +..+.. .+..|+++++ +.++ .|||+|..+++|++++.+ ++ .
T Consensus 155 ~~~~~~~~l~~~~-~g~~~~~~~-----------------~~~~~~~i~~-s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~ 215 (326)
T 2ghs_A 155 KAETGAGSIYHVA-KGKVTKLFA-----------------DISIPNSICF-SPDGTTGYFVDTKVNRLMRVPLDARTGLP 215 (326)
T ss_dssp TCCTTCEEEEEEE-TTEEEEEEE-----------------EESSEEEEEE-CTTSCEEEEEETTTCEEEEEEBCTTTCCB
T ss_pred cCCCCceEEEEEe-CCcEEEeeC-----------------CCcccCCeEE-cCCCCEEEEEECCCCEEEEEEcccccCCc
Confidence 46788998 66 443321 1235778886 5555 699999999999999985 33 2
Q ss_pred e-----e--eCCCCCccceEEEEec
Q 010579 233 C-----S--DNYDDTFHLGIFVLVA 250 (507)
Q Consensus 233 ~-----~--~~~~~G~p~gIa~~~~ 250 (507)
. . .....+.|.+++++..
T Consensus 216 ~~~~~~~~~~~~~~~~p~gi~~d~~ 240 (326)
T 2ghs_A 216 TGKAEVFIDSTGIKGGMDGSVCDAE 240 (326)
T ss_dssp SSCCEEEEECTTSSSEEEEEEECTT
T ss_pred ccCceEEEECCCCCCCCCeeEECCC
Confidence 1 1 1123456778777654
No 66
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.56 E-value=1.5e-06 Score=85.47 Aligned_cols=146 Identities=18% Similarity=0.166 Sum_probs=93.0
Q ss_pred CeeEEEEcCCCcEEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEe
Q 010579 84 EPFSVAVSPSGELLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~--n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVAD 160 (507)
.|.+|+++|||.||+++.. ++.|++++.++ +....+.... .....|.+|+++++|+ ||+++
T Consensus 41 ~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~---g~~~~~~~~~-------------~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 41 NPTYLALSAKDCLYSVDKEDDEGGIAAWQIDG---QTAHKLNTVV-------------APGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp CCCCEEECTTCEEEEEEEETTEEEEEEEEEET---TEEEEEEEEE-------------EESCCCSEEEEETTTTEEEEEE
T ss_pred CcceEEEccCCeEEEEEecCCCceEEEEEecC---CcEEEeeeee-------------cCCCCCEEEEECCCCCEEEEEe
Confidence 6999999999999999864 67899998752 3333322100 0124799999999998 99999
Q ss_pred CCCCeEEEEc--CCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC-Cceee-
Q 010579 161 TMNMAIRKIS--DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD-DDCSD- 235 (507)
Q Consensus 161 s~N~rIrk~d--~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~-~~~~~- 235 (507)
..++.|++++ .+| ...+..... .+ .++........|.++++ +++|.||+++.+++.|+.+++.. +.+..
T Consensus 105 ~~~~~v~v~~~~~~g~~~~~~~~~~---~~--~~p~~~~~~~~~~~~~~-spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 105 YHKGTAEVMKIAADGALTLTDTVQH---SG--HGPRPEQDGSHIHYTDL-TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEEC---CC--CCSSTTCSSCCEEEEEE-CTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEEeCCCCCeeecceeec---CC--CCCCccccCCCceEEEE-CCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 8888888887 344 333221100 00 01111123456778885 67777999999999999999873 32221
Q ss_pred ---CC-CCCccceEEEEecc
Q 010579 236 ---NY-DDTFHLGIFVLVAA 251 (507)
Q Consensus 236 ---~~-~~G~p~gIa~~~~a 251 (507)
.. ....|.++++....
T Consensus 179 ~~~~~~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDG 198 (347)
T ss_dssp EEEECCTTCCEEEEEECTTS
T ss_pred eeEEcCCCCCCceEEECCCC
Confidence 11 12246666665543
No 67
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.56 E-value=1.8e-06 Score=86.13 Aligned_cols=130 Identities=12% Similarity=0.137 Sum_probs=89.8
Q ss_pred CCeeEEEEcCCCcEEEEeCC------CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-
Q 010579 83 MEPFSVAVSPSGELLVLDSE------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN- 155 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn- 155 (507)
..|.++++|++|+|||++.. .++|++++ + +.+..+.. .+..|++|+++++|+
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~----g~~~~~~~----------------~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K----GKVTKLFA----------------DISIPNSICFSPDGTT 192 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T----TEEEEEEE----------------EESSEEEEEECTTSCE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C----CcEEEeeC----------------CCcccCCeEEcCCCCE
Confidence 46889999999999999863 46899998 5 44444321 134688999999996
Q ss_pred EEEEeCCCCeEEEEcC---CC-c----EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEE
Q 010579 156 IYIADTMNMAIRKISD---TG-V----TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQ 227 (507)
Q Consensus 156 IYVADs~N~rIrk~d~---~G-V----stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~ 227 (507)
|||+|+.+++|.+++. +| . ..+... + .....|.+++ +|.+|+|||++.++++|.+++
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~---------~-----~~~~~p~gi~-~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS---------T-----GIKGGMDGSV-CDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC---------T-----TSSSEEEEEE-ECTTSCEEEEEETTTEEEEEC
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEEC---------C-----CCCCCCCeeE-ECCCCCEEEEEeCCCEEEEEC
Confidence 9999999999999984 34 1 112110 0 0113577887 689999999999889999999
Q ss_pred CCCCceeeC-CCCCccceEEEE
Q 010579 228 LHDDDCSDN-YDDTFHLGIFVL 248 (507)
Q Consensus 228 l~~~~~~~~-~~~G~p~gIa~~ 248 (507)
+++...... .....+.++++.
T Consensus 258 ~~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 258 TDGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp TTCCEEEEEECSCSBEEEEEEE
T ss_pred CCCCEEEEEECCCCCcEEEEEe
Confidence 865543322 122235555554
No 68
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.52 E-value=1.9e-06 Score=88.07 Aligned_cols=136 Identities=10% Similarity=0.105 Sum_probs=86.3
Q ss_pred CCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCc
Q 010579 68 GGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHP 145 (507)
Q Consensus 68 ~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P 145 (507)
.|+.++.+..+ +..|.+|+++++|+ |||++.. ++|++++.+ +... .+.+...-. ......|
T Consensus 6 ~g~~~~~va~~---l~~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~----g~~~~~~~~~~~v~---------~~g~~g~ 68 (353)
T 2g8s_A 6 ATVNVEVLQDK---LDHPWALAFLPDNHGMLITLRG-GELRHWQAG----KGLSAPLSGVPDVW---------AHGQGGL 68 (353)
T ss_dssp CCSEEEEEEEE---ESSEEEEEECSTTCCEEEEETT-TEEEEEETT----TEECCCCBSCCCCC---------CSTTCSE
T ss_pred CCcEEEEEECC---CCCcEEEEEcCCCCEEEEEeCC-ceEEEEeCC----CceeeEecCCcccc---------cCCCCCc
Confidence 34444444432 34899999999999 9999974 899999876 3221 222221000 0113467
Q ss_pred ceEEEcC----CCCEEEEeCC-------CCeEEEEcCC---C----cEEEecCcccCCCCCCCCCccCccCCCCceEEEE
Q 010579 146 KGLAVDD----RGNIYIADTM-------NMAIRKISDT---G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 207 (507)
Q Consensus 146 ~GIaVd~----dGnIYVADs~-------N~rIrk~d~~---G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~v 207 (507)
.||++++ +|.|||+++. .++|.+++.+ + ..++..+. +........+.+|+ .
T Consensus 69 ~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~----------p~~~~~~h~~~~l~-~ 137 (353)
T 2g8s_A 69 LDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQM----------PKLSTGNHFGGRLV-F 137 (353)
T ss_dssp EEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECS----------SCCBSSSCCCCCEE-E
T ss_pred eeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEEC----------CCCCCCcccCccEE-E
Confidence 8999998 5889999875 4688887632 1 22222111 00111234577888 4
Q ss_pred cCCCeEEEEeCC-------------CCeEEEEECCCC
Q 010579 208 GSSCSLLVIDRG-------------NQAIREIQLHDD 231 (507)
Q Consensus 208 d~~G~LyVaD~g-------------n~rIr~I~l~~~ 231 (507)
+++|.|||+.-. .++|.+|++++.
T Consensus 138 ~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 138 DGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 889999999632 368999998864
No 69
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.52 E-value=1.9e-06 Score=91.45 Aligned_cols=123 Identities=17% Similarity=0.240 Sum_probs=79.6
Q ss_pred CCeeeEEeecCCCCCCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcce
Q 010579 68 GGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 147 (507)
Q Consensus 68 ~G~~~~~~~~G~~~~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~G 147 (507)
.++.++.+..+ +..|++|+++++|+|||++...++|++++.. .+....+......... ......+.|
T Consensus 15 ~gf~~~~~a~~---l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~---~g~~~~~~~~~~~~~~-------~~g~~Gllg 81 (454)
T 1cru_A 15 ENFDKKVILSN---LNKPHALLWGPDNQIWLTERATGKILRVNPE---SGSVKTVFQVPEIVND-------ADGQNGLLG 81 (454)
T ss_dssp TTSCEEEEECC---CSSEEEEEECTTSCEEEEETTTCEEEEECTT---TCCEEEEEECTTCCCC-------TTSSCSEEE
T ss_pred CCeEEEEEECC---CCCceEEEEcCCCcEEEEEcCCCEEEEEECC---CCcEeEEecCCccccc-------cCCCCceeE
Confidence 45555555543 4589999999999999999987899999875 2455555443211100 001245779
Q ss_pred EEEcC----CCCEEEEeCC------------CCeEEEEcCC---C----cEEEecCcccCCCCCCCCCccCccCCCCceE
Q 010579 148 LAVDD----RGNIYIADTM------------NMAIRKISDT---G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDV 204 (507)
Q Consensus 148 IaVd~----dGnIYVADs~------------N~rIrk~d~~---G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gI 204 (507)
|++++ +|.|||+++. ..+|.+++.+ + ..+|.-+.. . ...-.+.+|
T Consensus 82 ia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p----------~--~~~H~~~~l 149 (454)
T 1cru_A 82 FAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP----------S--SKDHQSGRL 149 (454)
T ss_dssp EEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC----------C--CSSCCEEEE
T ss_pred EEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC----------C--CCCCCCCeE
Confidence 99999 7889999974 4688888731 1 123321110 0 113457788
Q ss_pred EEEcCCCeEEEE
Q 010579 205 VYVGSSCSLLVI 216 (507)
Q Consensus 205 a~vd~~G~LyVa 216 (507)
+ .+.+|.|||+
T Consensus 150 ~-f~pDG~Lyv~ 160 (454)
T 1cru_A 150 V-IGPDQKIYYT 160 (454)
T ss_dssp E-ECTTSCEEEE
T ss_pred e-ECCCCeEEEE
Confidence 8 5889999998
No 70
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.51 E-value=1.7e-07 Score=96.95 Aligned_cols=113 Identities=14% Similarity=0.114 Sum_probs=79.5
Q ss_pred CCCCCeeEEEEcCCCcEEEEeC-----------------CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccC
Q 010579 80 KFGMEPFSVAVSPSGELLVLDS-----------------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARM 142 (507)
Q Consensus 80 ~~~~~P~gIaVd~dG~LYVaDs-----------------~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~f 142 (507)
..+..|++++++++|.+||++. ..++|+++++. .+..++. .|
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-----~~~~~~~----------------~l 220 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-----DVRVVAE----------------GF 220 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-----CCEEEEE----------------EE
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-----eEEEeec----------------CC
Confidence 3467999999999999999875 24689999862 3444432 26
Q ss_pred CCcceEEEcCCCC-EEEEeCCCCeEEEEc--CCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcC-CCeEEEEe
Q 010579 143 NHPKGLAVDDRGN-IYIADTMNMAIRKIS--DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVID 217 (507)
Q Consensus 143 n~P~GIaVd~dGn-IYVADs~N~rIrk~d--~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~-~G~LyVaD 217 (507)
..|+||++++||. |||||+..++|++++ .+| +... .. . . .-..|.+++ +|. +|+|||+.
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~---~~---~-~--------~~g~PDGi~-vD~e~G~lwva~ 284 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL---RV---L-S--------FDTLVDNIS-VDPVTGDLWVGC 284 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE---EE---E-E--------CSSEEEEEE-ECTTTCCEEEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC---EE---E-e--------CCCCCceEE-EeCCCCcEEEEe
Confidence 7899999999995 999999999999998 344 2211 00 0 0 013688988 588 59999976
Q ss_pred -CCCCeEEEEECC
Q 010579 218 -RGNQAIREIQLH 229 (507)
Q Consensus 218 -~gn~rIr~I~l~ 229 (507)
.+..+|.+++++
T Consensus 285 ~~~g~~v~~~~P~ 297 (355)
T 3sre_A 285 HPNGMRIFFYDAE 297 (355)
T ss_dssp ESCHHHHHSCCTT
T ss_pred cCCceEEEEECCC
Confidence 344455555443
No 71
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.46 E-value=1.4e-05 Score=78.54 Aligned_cols=122 Identities=13% Similarity=0.168 Sum_probs=81.9
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEE---ecCCCCccccCCCCcccccCCCcceEEEcCCCC-EE
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLV---AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IY 157 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~v---aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IY 157 (507)
..|..++++|||. ||+++...++|.+++.+.. .+.+..+ .....+. .....|.+|++++||+ ||
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~----------~~~~~~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADY----------TAHNGAAAIRLSHDGHFLY 255 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTC----------CSCCEEEEEEECTTSCEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCC----------CCCCcceeEEECCCCCEEE
Confidence 4799999999998 9999999999888876521 1333222 1111110 1135689999999998 89
Q ss_pred EEeCCCCeEEEEcC--CC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 158 IADTMNMAIRKISD--TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 158 VADs~N~rIrk~d~--~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
|++..+++|.+++. +| +..+..... .-..|.++++.++...|||++..++.|..++.+
T Consensus 256 v~~~~~~~v~v~~~~~~g~~~~~~~~~~--------------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGHLTLIQQIST--------------EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEETTTEEEEEEECGGGCEEEEEEEEC--------------SSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEECCCCcEEEeEEEec--------------CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 99998999998883 34 333321000 012578998644444699999999999888554
No 72
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.45 E-value=2.8e-06 Score=83.49 Aligned_cols=135 Identities=15% Similarity=0.178 Sum_probs=95.2
Q ss_pred CeeEEEEcCCCcEEEEeCC-CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSE-NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~-n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
...++.+.++|+++|++.. +++|+.++++ |+..--.+...+. ...+..|.+++++++|+++|++..
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~----Gk~l~~~~~~~~~---------~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMK----GEVLSKTEFETGI---------ERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTT----SCEEEEEEECCSC---------SSGGGSCSCCEECTTSCEEEEETT
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCC----CCEEEEEeccCCC---------CcccccccCceECCCCCEEEEecC
Confidence 4567888999999999998 8999999987 4332222111011 113456889999999999999999
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeCC---
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY--- 237 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~~--- 237 (507)
+++|..+|.+| +.++..+ ..|.+++ ...+|+++|++..+++|..+++.++......
T Consensus 145 ~~~v~~~d~~G~~~w~~~~~------------------~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKLS------------------GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp TTEEEEECTTSCEEEEEECS------------------SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred CCEEEEECCCCCEEEEEECC------------------CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 99999999888 3444211 2466776 4678999999999999999999954443211
Q ss_pred -----CCCccceEEEEec
Q 010579 238 -----DDTFHLGIFVLVA 250 (507)
Q Consensus 238 -----~~G~p~gIa~~~~ 250 (507)
....|.+++++.+
T Consensus 206 ~~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp GSBSCCCSEEEEEEECTT
T ss_pred CCCCccccccccceEcCC
Confidence 1123667776654
No 73
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.43 E-value=4.9e-06 Score=85.77 Aligned_cols=149 Identities=16% Similarity=0.129 Sum_probs=94.4
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC----CCCEEE
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD----RGNIYI 158 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~----dGnIYV 158 (507)
..|++|++.+||.|||++...++|++++.++ +....+.+...-. ......|.||++++ +|.|||
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~---g~~~~v~~~~~v~---------~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKT---GRKTELGEVPGVS---------PSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCC---------CBTTBSEEEEEECTTHHHHCEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCC---CcEeeecccCcee---------ecCCCCceeeEeccccccCCEEEE
Confidence 4799999999999999999889999998752 4444443322100 01245789999998 488999
Q ss_pred EeC--CCCeEEEEcCCC----------cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEe---------
Q 010579 159 ADT--MNMAIRKISDTG----------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID--------- 217 (507)
Q Consensus 159 ADs--~N~rIrk~d~~G----------VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD--------- 217 (507)
+.+ ..++|.++..++ ..+|.-+.. . ...-....|+ .+.+|.|||+-
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p----------~--~~~H~g~~l~-fgpDG~Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIP----------K--GVIHNGGRIA-FGPDKMLYAGTGESGDTGLS 166 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEEC----------C--CSSCCCCCEE-ECTTSCEEEECBCTTCGGGT
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCC----------C--CCCccCcccc-CCCCCCEEEEECCCCCCccc
Confidence 865 457888886322 233321110 0 1122455677 48899999993
Q ss_pred ----CCCCeEEEEECCCCc---------eeeCCCCCccceEEEEe-cceeEEe
Q 010579 218 ----RGNQAIREIQLHDDD---------CSDNYDDTFHLGIFVLV-AAAFFGY 256 (507)
Q Consensus 218 ----~gn~rIr~I~l~~~~---------~~~~~~~G~p~gIa~~~-~a~~~gy 256 (507)
...++|.+|++++.. -.+..+.-.|.|+++.. +..|+.+
T Consensus 167 qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 167 QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 246899999988752 11222233477887764 3334444
No 74
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.42 E-value=4.7e-05 Score=73.90 Aligned_cols=134 Identities=13% Similarity=0.171 Sum_probs=90.7
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEe
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVAD 160 (507)
..|.+++++++|+ ||+++. ++.|.+++... ++.......+ . .+ .-..|.+|+++++|+ ||+++
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~---~~~~~~~~~~--~----~~-----~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNA-DGELITIDTAD---NKILSRKKLL--D----DG-----KEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTCCCCEEETTTTEEEEECT-TSEEEEEETTT---TEEEEEEECC--C----SS-----SCCCEEEEEEETTTTEEEEEE
T ss_pred CccceEEECCCCCEEEEEcC-CCeEEEEECCC---CeEEEEEEcC--C----CC-----CCcccceEEECCCCCEEEEEe
Confidence 3689999999987 777765 78999999862 4433222111 0 01 124678999999998 99999
Q ss_pred CCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee-C
Q 010579 161 TMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-N 236 (507)
Q Consensus 161 s~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~-~ 236 (507)
..++.|.++|.. + +.++.. ..|.++++.++...|||++..++.|..+++.+..... .
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~-------------------~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAA-------------------PESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEEC-------------------SSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEEc-------------------CCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 998999999954 3 333321 1345677655555699999999999999998765443 2
Q ss_pred CCCCccceEEEEec
Q 010579 237 YDDTFHLGIFVLVA 250 (507)
Q Consensus 237 ~~~G~p~gIa~~~~ 250 (507)
.....|.++++...
T Consensus 311 ~~~~~~~~~~~s~d 324 (353)
T 3vgz_A 311 DTPTHPNSLALSAD 324 (353)
T ss_dssp ECCSEEEEEEECTT
T ss_pred ecCCCCCeEEEcCC
Confidence 22334666665443
No 75
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.36 E-value=5e-05 Score=78.26 Aligned_cols=126 Identities=15% Similarity=0.210 Sum_probs=79.9
Q ss_pred CCeeEEEEcC----CCcEEEEeC--CCCeEEEEeCCCC-----CCCccEEEe-cCCCCccccCCCCcccccCCCcceEEE
Q 010579 83 MEPFSVAVSP----SGELLVLDS--ENSNIYKISTSLS-----PYSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAV 150 (507)
Q Consensus 83 ~~P~gIaVd~----dG~LYVaDs--~n~rI~ki~~~g~-----~~g~i~~va-G~~~G~~G~~dG~~~~a~fn~P~GIaV 150 (507)
..|.+|+++| +|.|||+.+ ..++|.|+..+.. ......++. +.+. ........|++
T Consensus 80 ~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~------------~~~H~g~~l~f 147 (347)
T 3das_A 80 GGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK------------GVIHNGGRIAF 147 (347)
T ss_dssp BSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC------------CSSCCCCCEEE
T ss_pred CCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC------------CCCccCccccC
Confidence 4689999998 488999764 4579999987641 112233332 2211 01235678999
Q ss_pred cCCCCEEEEeC-------------CCCeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEe
Q 010579 151 DDRGNIYIADT-------------MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID 217 (507)
Q Consensus 151 d~dGnIYVADs-------------~N~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD 217 (507)
++||.|||+-. ...+|.+|+.+|- +.-+ ..+.+...-...+.+|+++++ +.+|.||++|
T Consensus 148 gpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~--ip~~-----nPf~~~~i~a~G~RNp~Gla~-dp~G~L~~~d 219 (347)
T 3das_A 148 GPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE--PAPG-----NPFPGSPVYSYGHRNVQGLAW-DDKQRLFASE 219 (347)
T ss_dssp CTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS--BCTT-----CSSTTCCEEEBCCSBCCEEEE-CTTCCEEEEE
T ss_pred CCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC--ccCC-----CCCCCCeEEeeCCCCcceEEE-CCCCCEEEEe
Confidence 99999999942 2467999998771 1100 001111111224778999996 6689999999
Q ss_pred CCCC---eEEEEEC
Q 010579 218 RGNQ---AIREIQL 228 (507)
Q Consensus 218 ~gn~---rIr~I~l 228 (507)
.+.. .|.+|..
T Consensus 220 ~g~~~~deln~i~~ 233 (347)
T 3das_A 220 FGQDTWDELNAIKP 233 (347)
T ss_dssp CCSSSCEEEEEECT
T ss_pred cCCCCCceeeEEcC
Confidence 8764 5666653
No 76
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.35 E-value=3.1e-06 Score=86.86 Aligned_cols=123 Identities=16% Similarity=0.071 Sum_probs=83.7
Q ss_pred CeeEEEEcCCCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n-~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs 161 (507)
.|.+|++|++|++||+|+.. +.|+|+++++. .+..+.-.. . .......++||+++++|+ |+|+|+
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~---~~~~~~~~~-~---------~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGK---TVSTFAWES-G---------NGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSC---CEEEEEECC-C---------CSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCC---EEeeeeecC-C---------CcccccCcceEEEeCCCCEEEEEcC
Confidence 48899999999999999999 99999999842 123222111 0 011245688999999997 777777
Q ss_pred CCCeEEEEcCCC-cE-EEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeE-EEEeCCCCeEEEEECCC
Q 010579 162 MNMAIRKISDTG-VT-TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSL-LVIDRGNQAIREIQLHD 230 (507)
Q Consensus 162 ~N~rIrk~d~~G-Vs-tIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~L-yVaD~gn~rIr~I~l~~ 230 (507)
.++|.+||... +. .+.-...| ....|..|.+|..+..+|.+ +|++..++++...+.++
T Consensus 205 -~g~L~~fD~~~pv~~~v~~~~~G----------~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 205 -PRALTAFDVSKPYAWPEPVKING----------DFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp -SSSEEEEECSSSSCCCEECEESS----------CCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred -CCeEEEEcCCCCcceeecccccC----------CcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 99999999654 22 12100000 01356778886334556666 99998888877777766
No 77
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.34 E-value=2.8e-05 Score=77.28 Aligned_cols=156 Identities=10% Similarity=-0.055 Sum_probs=101.1
Q ss_pred CcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEE
Q 010579 44 VKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLV 122 (507)
Q Consensus 44 ~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~v 122 (507)
.+.|.++|+.++++.. ...-+. ...+.+++++. +.||+++..+++|.+++... .++ ..+
T Consensus 43 ~s~v~~iD~~tg~v~~--------------~i~l~~--~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t---~~v~~~i 102 (266)
T 2iwa_A 43 RSSVRQVALQTGKVEN--------------IHKMDD--SYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRT---LSNIKNF 102 (266)
T ss_dssp TCEEEEEETTTCCEEE--------------EEECCT--TCCEEEEEEET-TEEEEEETTCSEEEEEETTT---TEEEEEE
T ss_pred CCEEEEEECCCCCEEE--------------EEecCC--CcceEEEEEeC-CEEEEEEecCCEEEEEECCC---CcEEEEE
Confidence 4677777777766551 111111 23567888874 58999999999999999862 222 222
Q ss_pred ecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCC
Q 010579 123 AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFS 199 (507)
Q Consensus 123 aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~ 199 (507)
.- + ...+.||+.| .+.+||+| +.++|.+||... +.+|.-+..+ ..+.
T Consensus 103 ~~---g-------------~~~g~glt~D-g~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~------------~p~~ 152 (266)
T 2iwa_A 103 TH---Q-------------MKDGWGLATD-GKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNG------------HRVI 152 (266)
T ss_dssp EC---C-------------SSSCCEEEEC-SSSEEEEC-SSSEEEEECTTTCCEEEEEECEETT------------EECC
T ss_pred EC---C-------------CCCeEEEEEC-CCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCC------------cccc
Confidence 10 0 0123456654 24699999 688999999766 4455322211 1245
Q ss_pred CCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeCC-CC--------------CccceEEEEecc
Q 010579 200 NDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY-DD--------------TFHLGIFVLVAA 251 (507)
Q Consensus 200 ~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~~-~~--------------G~p~gIa~~~~a 251 (507)
.|+++.+. +|.||+.....+.|.+|++.+..+.... .. .-|+|||...+.
T Consensus 153 ~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~ 217 (266)
T 2iwa_A 153 RLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN 217 (266)
T ss_dssp CEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred cceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence 68888875 6799999999999999999887764321 11 246799988654
No 78
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.33 E-value=5.1e-05 Score=75.07 Aligned_cols=125 Identities=10% Similarity=0.116 Sum_probs=83.1
Q ss_pred CCCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEE
Q 010579 82 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 159 (507)
Q Consensus 82 ~~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVA 159 (507)
+..|..++++|||. ||+++..+++|.+++.+ .+.+..+.... .. ...+..|.+|++++||+ ||++
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~---~g~~~~~~~~~-~~---------~~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA---DGMLDEIQTVA-AD---------TVNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEE---TTEEEEEEEEE-SC---------SSCCCCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec---CCceEEeEEEe-cC---------CCCCCCcccEEECCCCCEEEEE
Confidence 35799999999996 89999888999999875 24433222110 00 01245788999999998 8999
Q ss_pred eCC-CCeEEEEcC---CC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEE--CCCCc
Q 010579 160 DTM-NMAIRKISD---TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQ--LHDDD 232 (507)
Q Consensus 160 Ds~-N~rIrk~d~---~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~--l~~~~ 232 (507)
+.. +++|.+++- +| +..+..... -..|.++++.++...||+++..++.|..+. +.++.
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~---------------g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLT---------------GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEEC---------------SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecC---------------CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 998 788888663 34 333321000 126788886444445999998889888854 44444
Q ss_pred ee
Q 010579 233 CS 234 (507)
Q Consensus 233 ~~ 234 (507)
+.
T Consensus 342 ~~ 343 (361)
T 3scy_A 342 LT 343 (361)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 79
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.32 E-value=1.1e-05 Score=82.20 Aligned_cols=158 Identities=9% Similarity=0.081 Sum_probs=90.9
Q ss_pred CCeeEEEEcCCCcEEEEeCC-------------CCeEEEEeCCCCCCCccEEEecCCCCccccCCC---CcccccCCCcc
Q 010579 83 MEPFSVAVSPSGELLVLDSE-------------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDG---RPRGARMNHPK 146 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~-------------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG---~~~~a~fn~P~ 146 (507)
..|.+|++++||.|||+... .++|+||+++++. -.+++ ..+. .+ ..-...+.+|.
T Consensus 130 h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~------p~~np--f~~~-~~~~~~i~a~G~rnp~ 200 (353)
T 2g8s_A 130 HFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI------PDDNP--FIKE-SGVRAEIWSYGIRNPQ 200 (353)
T ss_dssp CCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC------CTTCT--TTTS-TTSCTTEEEECCSEEE
T ss_pred ccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC------CCCCC--CcCC-CCCCccEEEEcCcCcc
Confidence 56889999999999999633 3689999998431 01111 0010 00 01112478899
Q ss_pred eEEEcC-CCCEEEEeCCCC---eEEEEcCCCcE---EEecCcccCCCCCCC-----CCccCc------cCCCCceEEEEc
Q 010579 147 GLAVDD-RGNIYIADTMNM---AIRKISDTGVT---TIAGGKWSRGVGHVD-----GPSEDA------KFSNDFDVVYVG 208 (507)
Q Consensus 147 GIaVd~-dGnIYVADs~N~---rIrk~d~~GVs---tIaGG~~g~~~G~~d-----g~~~~a------~f~~P~gIa~vd 208 (507)
||++|+ +|+||++|.+.+ +|.++...+-. ...++..-.+....+ .+.... ....|.++++..
T Consensus 201 gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~ 280 (353)
T 2g8s_A 201 GMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYN 280 (353)
T ss_dssp EEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEEC
T ss_pred ceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEEC
Confidence 999999 899999998753 55555443310 001110000000000 000000 113688898754
Q ss_pred C------CCeEEEEeCCCCeEEEEECCCCceee----C-CCCCccceEEEEe
Q 010579 209 S------SCSLLVIDRGNQAIREIQLHDDDCSD----N-YDDTFHLGIFVLV 249 (507)
Q Consensus 209 ~------~G~LyVaD~gn~rIr~I~l~~~~~~~----~-~~~G~p~gIa~~~ 249 (507)
. +|.|||+|..+++|++++++++.... . ...+.|.++++..
T Consensus 281 g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 281 SDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp CSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 3 48999999999999999988643211 1 1123567777654
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.26 E-value=4.1e-05 Score=74.13 Aligned_cols=127 Identities=13% Similarity=0.230 Sum_probs=87.6
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCcc----EEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-E
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRP----KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-I 156 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i----~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-I 156 (507)
..|.+++++++|. ||+++..++.|.+++... ++. ..+.. -..|.+++++++|+ |
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~---~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQN---PENITLLNAVGT-----------------NNLPGTIVVSRDGSTV 235 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECSS---TTSCEEEEEEEC-----------------SSCCCCEEECTTSSEE
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECCC---CcccceeeeccC-----------------CCCCceEEECCCCCEE
Confidence 5699999999997 999999999999999863 332 22211 13688999999999 9
Q ss_pred EEEeCCCCeEEEEcCC-C-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 157 YIADTMNMAIRKISDT-G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 157 YVADs~N~rIrk~d~~-G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
||++...+.|.+++.. + +..+...... . ..+. .......++++.++...|||++..++.|..+++....+.
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~--~-~~~~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHG--L-LIDP----RPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECC--C-CCCC----GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccc--c-ccCC----CCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 9999888899999954 4 3323211000 0 0000 111122567765555679999999999999999877665
Q ss_pred eC
Q 010579 235 DN 236 (507)
Q Consensus 235 ~~ 236 (507)
+.
T Consensus 309 ~~ 310 (331)
T 3u4y_A 309 YV 310 (331)
T ss_dssp EC
T ss_pred ce
Confidence 53
No 81
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.21 E-value=9.5e-05 Score=71.54 Aligned_cols=136 Identities=13% Similarity=0.173 Sum_probs=87.0
Q ss_pred CeeE-EEEcCCCcEEEEeCCC-C--eEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEE
Q 010579 84 EPFS-VAVSPSGELLVLDSEN-S--NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYI 158 (507)
Q Consensus 84 ~P~g-IaVd~dG~LYVaDs~n-~--rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYV 158 (507)
.|.. ++++++|..+++.... + .|.+++... +........ -..|.+++++++|+ ||+
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~---~~~~~~~~~----------------~~~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK---NKFISTIPI----------------PYDAVGIAISPNGNGLIL 144 (331)
T ss_dssp SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT---TEEEEEEEC----------------CTTEEEEEECTTSSCEEE
T ss_pred CCccceEECCCCCEEEEecCCCCcccEEEEECCC---CCeEEEEEC----------------CCCccceEECCCCCEEEE
Confidence 5778 9999999843344444 4 999999862 333222211 13578999999997 999
Q ss_pred EeCCCCe-EEEEc--CCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC-eEEEEeCCCCeEEEEECCCCce
Q 010579 159 ADTMNMA-IRKIS--DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 159 ADs~N~r-Irk~d--~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G-~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
++...+. |.+++ .+| +.... ...- ..-..|.++++ +++| .|||++..++.|+.+++....+
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~-~~~~------------~~~~~~~~~~~-spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTG-QEFI------------SGGTRPFNITF-TPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEE-EEEE------------CSSSSEEEEEE-CTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EecCCCceEEEEEECCCCcEeecC-Cccc------------cCCCCccceEE-CCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 9998777 77665 444 32221 1100 01124788885 5566 5999999999999999987654
Q ss_pred ---ee-CCCCCccceEEEEecce
Q 010579 234 ---SD-NYDDTFHLGIFVLVAAA 252 (507)
Q Consensus 234 ---~~-~~~~G~p~gIa~~~~a~ 252 (507)
.. ......|.++++.....
T Consensus 211 ~~~~~~~~~~~~~~~~~~spdg~ 233 (331)
T 3u4y_A 211 ITLLNAVGTNNLPGTIVVSRDGS 233 (331)
T ss_dssp CEEEEEEECSSCCCCEEECTTSS
T ss_pred cceeeeccCCCCCceEEECCCCC
Confidence 22 22334566777665433
No 82
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.20 E-value=0.00028 Score=69.95 Aligned_cols=129 Identities=21% Similarity=0.293 Sum_probs=89.8
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs 161 (507)
.+.+++++++|. ||++....+.|++++... ++........ ..+.+++++++|+ ||++..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~~----------------~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS---NTVAGTVKTG----------------KSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEECS----------------SSEEEEEECTTSSEEEEEET
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCC---CeEEEEEeCC----------------CCcceEEECCCCCEEEEEeC
Confidence 689999999887 888988889999999873 3333222111 2578999999998 779999
Q ss_pred CCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC-C
Q 010579 162 MNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-Y 237 (507)
Q Consensus 162 ~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~-~ 237 (507)
.++.|+++|.. + +.++..+ ..|.++++.++...||++...++.|+.+++....+... .
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 197 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVSVG------------------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK 197 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECC------------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEecC------------------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 99999999954 3 3333221 13567776444556889999999999999988765442 2
Q ss_pred CCCccceEEEEe
Q 010579 238 DDTFHLGIFVLV 249 (507)
Q Consensus 238 ~~G~p~gIa~~~ 249 (507)
....+.++++..
T Consensus 198 ~~~~~~~~~~~~ 209 (391)
T 1l0q_A 198 VEAAPSGIAVNP 209 (391)
T ss_dssp CSSEEEEEEECT
T ss_pred cCCCccceEECC
Confidence 223445555543
No 83
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.19 E-value=0.00016 Score=71.44 Aligned_cols=144 Identities=13% Similarity=0.138 Sum_probs=91.2
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCC----c-cEEE-----ecCCCCccccCCCCcccccCCCcceEEEc
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYS----R-PKLV-----AGSPEGYYGHVDGRPRGARMNHPKGLAVD 151 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g----~-i~~v-----aG~~~G~~G~~dG~~~~a~fn~P~GIaVd 151 (507)
..|++++++|+|. ||+++...++|.+++.+... + . +... .-. ..-..|.+++++
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~-~~~~~~~l~~~~~~~~~~~--------------~~~~~~~~~~~s 219 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNA-NADNKEKFLTKGTPEAFKV--------------APGSGPRHLIFN 219 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTC-CTTTCCCCEEEEEEEEEEC--------------CTTCCEEEEEEC
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC-Ccccccceeecccccceec--------------CCCCCCeEEEEc
Confidence 3568999999997 99999988999888755211 1 1 1111 000 012468899999
Q ss_pred CCCC-EEEEeCCCCeEEEEcC-CC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC-CCeEEEEE
Q 010579 152 DRGN-IYIADTMNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQ 227 (507)
Q Consensus 152 ~dGn-IYVADs~N~rIrk~d~-~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g-n~rIr~I~ 227 (507)
+||+ |||++..+++|++++. +| +..+..... ....+..|.+|++.++...||+++.+ .+.|+.++
T Consensus 220 pdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~-----------~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 220 SDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA-----------DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES-----------CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec-----------CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 9997 9999988899999984 44 332221000 01123467888864444458999998 89999988
Q ss_pred CC--CCcee---eCCCCCccceEEEEecce
Q 010579 228 LH--DDDCS---DNYDDTFHLGIFVLVAAA 252 (507)
Q Consensus 228 l~--~~~~~---~~~~~G~p~gIa~~~~a~ 252 (507)
++ ++... .......|.++++.....
T Consensus 289 ~~~~~g~~~~~~~~~~g~~~~~~~~spdg~ 318 (361)
T 3scy_A 289 VDETNGTLTKVGYQLTGIHPRNFIITPNGK 318 (361)
T ss_dssp ECTTTCCEEEEEEEECSSCCCEEEECTTSC
T ss_pred EcCCCCcEEEeeEecCCCCCceEEECCCCC
Confidence 75 22211 111233577777765543
No 84
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.17 E-value=6.6e-05 Score=74.78 Aligned_cols=130 Identities=12% Similarity=0.006 Sum_probs=87.9
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
...||+++. +.||+++..+++|.++|... .+. ..+.-. ..+.|++.|. +.||++| +
T Consensus 97 FgeGit~~g-~~Ly~ltw~~~~v~V~D~~T---l~~~~ti~~~-----------------~eGwGLt~Dg-~~L~vSd-G 153 (268)
T 3nok_A 97 FAEGLASDG-ERLYQLTWTEGLLFTWSGMP---PQRERTTRYS-----------------GEGWGLCYWN-GKLVRSD-G 153 (268)
T ss_dssp CEEEEEECS-SCEEEEESSSCEEEEEETTT---TEEEEEEECS-----------------SCCCCEEEET-TEEEEEC-S
T ss_pred ceeEEEEeC-CEEEEEEccCCEEEEEECCc---CcEEEEEeCC-----------------CceeEEecCC-CEEEEEC-C
Confidence 456788875 48999999999999999862 222 222211 1345788763 5799999 5
Q ss_pred CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC-C-
Q 010579 163 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-Y- 237 (507)
Q Consensus 163 N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~-~- 237 (507)
.++|+++|+.. +.+|.-+..+ ..+..++.+.++ +|.||+.....+.|.+||+.++.+... .
T Consensus 154 s~~l~~iDp~T~~v~~~I~V~~~g------------~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 154 GTMLTFHEPDGFALVGAVQVKLRG------------QPVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp SSEEEEECTTTCCEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred CCEEEEEcCCCCeEEEEEEeCCCC------------cccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 88999999765 3444322111 124456677764 779999999999999999988775431 0
Q ss_pred -------------CCCccceEEEEec
Q 010579 238 -------------DDTFHLGIFVLVA 250 (507)
Q Consensus 238 -------------~~G~p~gIa~~~~ 250 (507)
....++|||.+.+
T Consensus 220 ~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 220 SALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp HHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred CCCcccccccccCcCCceEEEEEcCC
Confidence 1125788988764
No 85
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.17 E-value=0.00028 Score=69.85 Aligned_cols=142 Identities=15% Similarity=0.296 Sum_probs=96.7
Q ss_pred EEecCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCC
Q 010579 39 VVSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYS 117 (507)
Q Consensus 39 va~ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g 117 (507)
++....+.|+..+..+++.. ..+ .+. ..|.+++++++|. ||++....+.|+.++... +
T Consensus 6 vs~~~d~~v~v~d~~~~~~~-----~~~----------~~~---~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~---~ 64 (391)
T 1l0q_A 6 IANSESDNISVIDVTSNKVT-----ATI----------PVG---SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT---N 64 (391)
T ss_dssp EEETTTTEEEEEETTTTEEE-----EEE----------ECS---SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT---T
T ss_pred EEcCCCCEEEEEECCCCeEE-----EEe----------ecC---CCcceEEECCCCCEEEEECCCCCeEEEEECCC---C
Confidence 34455577777787766544 111 111 2488999999987 778988889999999862 4
Q ss_pred ccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCCCCeEEEEcCCC---cEEEecCcccCCCCCCCCCc
Q 010579 118 RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPS 193 (507)
Q Consensus 118 ~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~ 193 (507)
+........ ..+.+++++++|+ ||++....+.|+++|... +.++..+
T Consensus 65 ~~~~~~~~~----------------~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~------------- 115 (391)
T 1l0q_A 65 NVIATVPAG----------------SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG------------- 115 (391)
T ss_dssp EEEEEEECS----------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-------------
T ss_pred eEEEEEECC----------------CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-------------
Confidence 433322111 1678999999998 889998889999999554 2333211
Q ss_pred cCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee
Q 010579 194 EDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 235 (507)
Q Consensus 194 ~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~ 235 (507)
..+.++++.++...||++...++.|+.+++....+..
T Consensus 116 -----~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 116 -----KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp -----SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -----CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 1356777644444588899989999999988766544
No 86
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.16 E-value=4e-05 Score=76.14 Aligned_cols=112 Identities=10% Similarity=0.088 Sum_probs=79.8
Q ss_pred CeeEEEEcCCCcEEEEeC--CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDS--ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs--~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
.|+||+++++|.||++.. +.+.|.+++.. ++++....-.+. -..+.|++++. +.||+++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~---tg~v~~~i~l~~--------------~~fgeGi~~~g-~~lyv~t~ 83 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQ---TGKVENIHKMDD--------------SYFGEGLTLLN-EKLYQVVW 83 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETT---TCCEEEEEECCT--------------TCCEEEEEEET-TEEEEEET
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECC---CCCEEEEEecCC--------------CcceEEEEEeC-CEEEEEEe
Confidence 589999999999999974 47899999987 354433221111 12455888883 58999999
Q ss_pred CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 162 MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 162 ~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.+++|.++|... +.+|.-+ . ..+.+++ .+.+.|||+| +.++|..|++.+...
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g-~----------------~~g~glt--~Dg~~l~vs~-gs~~l~viD~~t~~v 138 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ-M----------------KDGWGLA--TDGKILYGSD-GTSILYEIDPHTFKL 138 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC-S----------------SSCCEEE--ECSSSEEEEC-SSSEEEEECTTTCCE
T ss_pred cCCEEEEEECCCCcEEEEEECC-C----------------CCeEEEE--ECCCEEEEEC-CCCeEEEEECCCCcE
Confidence 999999999665 3444321 0 0234554 4567899999 789999999987553
No 87
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.13 E-value=0.00018 Score=70.67 Aligned_cols=154 Identities=13% Similarity=0.041 Sum_probs=98.8
Q ss_pred CcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEE
Q 010579 44 VKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLV 122 (507)
Q Consensus 44 ~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~v 122 (507)
.+.|.++|+.++++.. .. .++ ......||+++. +.||+++..+++|+++|... .+ +.++
T Consensus 42 ~S~v~~vD~~tgkv~~-----~~--------~l~---~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~t---l~~~~ti 101 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQ-----RA--------EVP---PPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLAT---LTPRARF 101 (243)
T ss_dssp SCEEEEEETTTCCEEE-----EE--------ECC---TTCCEEEEEEET-TEEEEEESSSSEEEEEETTT---TEEEEEE
T ss_pred CceEEEEECCCCCEEE-----EE--------eCC---CCcceeEEEEeC-CEEEEEEeeCCEEEEEECCc---CcEEEEE
Confidence 3577777777776551 01 111 012456777764 58999999999999999862 22 2222
Q ss_pred ecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCC
Q 010579 123 AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFS 199 (507)
Q Consensus 123 aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~ 199 (507)
.-. ..+.||+.| .+.||++|. .++|.++|+.. +.+|.-+..+ ..+.
T Consensus 102 ~~~-----------------~~Gwglt~d-g~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g------------~~~~ 150 (243)
T 3mbr_X 102 RYP-----------------GEGWALTSD-DSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGG------------RPLD 150 (243)
T ss_dssp ECS-----------------SCCCEEEEC-SSCEEEECS-SSEEEEECTTTCCEEEEEECEETT------------EECC
T ss_pred eCC-----------------CCceEEeeC-CCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCC------------cccc
Confidence 211 135678766 357999995 88999999766 3444322111 1233
Q ss_pred CCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC---------------CCCCccceEEEEec
Q 010579 200 NDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN---------------YDDTFHLGIFVLVA 250 (507)
Q Consensus 200 ~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~---------------~~~G~p~gIa~~~~ 250 (507)
..+.+.++ +|.||+.....+.|.+||+.++.+... .....++|||.+..
T Consensus 151 ~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 151 NLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred cceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 45666653 789999998899999999998776431 01125788998864
No 88
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.13 E-value=2.1e-05 Score=85.98 Aligned_cols=121 Identities=22% Similarity=0.243 Sum_probs=81.2
Q ss_pred CCCeeEEEEcC-CCcEEEEeCCC---------------------CeEEEEeCCCCC----CCccE--EEecCCCCcc---
Q 010579 82 GMEPFSVAVSP-SGELLVLDSEN---------------------SNIYKISTSLSP----YSRPK--LVAGSPEGYY--- 130 (507)
Q Consensus 82 ~~~P~gIaVd~-dG~LYVaDs~n---------------------~rI~ki~~~g~~----~g~i~--~vaG~~~G~~--- 130 (507)
...|.+|+++| +|.||++-+.| ++|+++...++- ..+.. +++|.+....
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 36899999998 89999996643 679999764321 11123 3444432111
Q ss_pred -ccCCCCcccccCCCcceEEEcCCCCEEE-EeCC-----------CCeEEEEcC-CC-cEEEecCcccCCCCCCCCCccC
Q 010579 131 -GHVDGRPRGARMNHPKGLAVDDRGNIYI-ADTM-----------NMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSED 195 (507)
Q Consensus 131 -G~~dG~~~~a~fn~P~GIaVd~dGnIYV-ADs~-----------N~rIrk~d~-~G-VstIaGG~~g~~~G~~dg~~~~ 195 (507)
....+......|+.|.+|++|++|+||| +|.. |+.|..+++ .| +..++.+.
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P-------------- 528 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-------------- 528 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC--------------
T ss_pred ccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC--------------
Confidence 0001112235799999999999999999 8863 568999996 45 66665321
Q ss_pred ccCCCCceEEEEcCCCeEEEEe
Q 010579 196 AKFSNDFDVVYVGSSCSLLVID 217 (507)
Q Consensus 196 a~f~~P~gIa~vd~~G~LyVaD 217 (507)
.+..|+|+++.++...|||+-
T Consensus 529 -~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 529 -IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp -TTCEEEEEEECTTSSEEEEEE
T ss_pred -CCccccCCEECCCCCEEEEEE
Confidence 134689999877777899884
No 89
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.12 E-value=0.00022 Score=70.76 Aligned_cols=131 Identities=11% Similarity=0.008 Sum_probs=87.7
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
...||+++. +.||+++..++++.++|... .+ +..+.-. ..+.|++.| .+.||++|.
T Consensus 88 FgeGit~~g-~~ly~ltw~~~~v~v~D~~t---~~~~~ti~~~-----------------~eG~glt~d-g~~L~~SdG- 144 (262)
T 3nol_A 88 FGEGISDWK-DKIVGLTWKNGLGFVWNIRN---LRQVRSFNYD-----------------GEGWGLTHN-DQYLIMSDG- 144 (262)
T ss_dssp CEEEEEEET-TEEEEEESSSSEEEEEETTT---CCEEEEEECS-----------------SCCCCEEEC-SSCEEECCS-
T ss_pred ceeEEEEeC-CEEEEEEeeCCEEEEEECcc---CcEEEEEECC-----------------CCceEEecC-CCEEEEECC-
Confidence 356788874 48999999999999999862 22 2222211 034577766 357999995
Q ss_pred CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceeeC-CC
Q 010579 163 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-YD 238 (507)
Q Consensus 163 N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~~-~~ 238 (507)
.++|+++|+.. +.+|.-+..+ ..+..++.+.++ +|.||+.....+.|.+||+.++.+... ..
T Consensus 145 s~~i~~iDp~T~~v~~~I~V~~~g------------~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 145 TPVLRFLDPESLTPVRTITVTAHG------------EELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp SSEEEEECTTTCSEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred CCeEEEEcCCCCeEEEEEEeccCC------------ccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 78999999765 3444322111 123455667764 689999999999999999988776431 11
Q ss_pred -------------CCccceEEEEecc
Q 010579 239 -------------DTFHLGIFVLVAA 251 (507)
Q Consensus 239 -------------~G~p~gIa~~~~a 251 (507)
...++|||.+.+.
T Consensus 211 ~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 211 NGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp TTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred CcCccccccccCcCCceEEEEEcCCC
Confidence 1256889988653
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.08 E-value=0.00067 Score=65.06 Aligned_cols=141 Identities=11% Similarity=0.064 Sum_probs=88.3
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE---EEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EE
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK---LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IY 157 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~---~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IY 157 (507)
..|.+++++++|. ||+++..+++|..++.+.. .+... .+.....+. .....|.+|+++++|. ||
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~----------~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENF----------SDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTC----------CSCCCEEEEEECTTSSEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccc----------cccCCccceEECCCCCEEE
Confidence 4789999999997 8899988899999997521 13322 111111111 1235688999999996 88
Q ss_pred EEeCCCCeEEEEcCC---C-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEEC--CCC
Q 010579 158 IADTMNMAIRKISDT---G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL--HDD 231 (507)
Q Consensus 158 VADs~N~rIrk~d~~---G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l--~~~ 231 (507)
|++..++.|.+++.+ + ...+..... -..|.++++.++...||+++...+.|..++. .++
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~---------------~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g 311 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPT---------------ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQG 311 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEEC---------------SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTT
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecC---------------CCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCc
Confidence 899888999998843 2 232211000 0136788864444458999988888888744 343
Q ss_pred ceee---CCCCCccceEEEEe
Q 010579 232 DCSD---NYDDTFHLGIFVLV 249 (507)
Q Consensus 232 ~~~~---~~~~G~p~gIa~~~ 249 (507)
.... ......|.+|++..
T Consensus 312 ~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 312 LLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp EEEEEEEEECSSSCCEEEEEE
T ss_pred eeeEccccccCCCCeeEEEEc
Confidence 2211 12223577777654
No 91
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.01 E-value=0.00053 Score=67.61 Aligned_cols=79 Identities=9% Similarity=0.204 Sum_probs=56.9
Q ss_pred CCCcceEEEcC-CCCEEEEeCCCCeEEEEcCCC-c-EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC
Q 010579 142 MNHPKGLAVDD-RGNIYIADTMNMAIRKISDTG-V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR 218 (507)
Q Consensus 142 fn~P~GIaVd~-dGnIYVADs~N~rIrk~d~~G-V-stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~ 218 (507)
+..+.+|++|+ .|.+||....+++|..+|.+| + ..+. -..+ . .+ ....+..|-||+ +|.+|+|||+..
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~-L~~g--~---~~--l~~~~~qpEGia-~d~~G~lyIvsE 242 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMS-LTKG--S---RG--LSHNIKQAEGVA-MDASGNIYIVSE 242 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEE-CSTT--G---GG--CSSCCCSEEEEE-ECTTCCEEEEET
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEE-cCCc--c---CC--cccccCCCCeeE-ECCCCCEEEEcC
Confidence 45789999998 578999999999999999888 3 3221 1100 0 01 123467899999 588999999987
Q ss_pred CCCeEEEEECCC
Q 010579 219 GNQAIREIQLHD 230 (507)
Q Consensus 219 gn~rIr~I~l~~ 230 (507)
. |.+++|....
T Consensus 243 ~-n~~y~f~~~~ 253 (255)
T 3qqz_A 243 P-NRFYRFTPQS 253 (255)
T ss_dssp T-TEEEEEEC--
T ss_pred C-ceEEEEEecC
Confidence 7 4999998653
No 92
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.97 E-value=0.00037 Score=66.69 Aligned_cols=145 Identities=10% Similarity=0.075 Sum_probs=88.9
Q ss_pred EecCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCC-cEEEEeCCCCeEEEEeCCCCCCCc
Q 010579 40 VSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSG-ELLVLDSENSNIYKISTSLSPYSR 118 (507)
Q Consensus 40 a~ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG-~LYVaDs~n~rI~ki~~~g~~~g~ 118 (507)
+....+.|+.+|..+++.. ..+. .. .. ...|.+++++++| .||+++...+.|.+++... ++
T Consensus 6 ~~~~~~~v~~~d~~~~~~~-----~~~~--------~~-~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~ 67 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVD-----KVIT--------IA-DA-GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT---GE 67 (337)
T ss_dssp EEETTTEEEEEETTTTEEE-----EEEE--------CT-TC-TTCCCCEEECTTSSEEEEEETTTTEEEEEETTT---CC
T ss_pred EcCCCCeEEEEECCCCcEE-----EEEE--------cC-CC-CCCccceEEcCCCCEEEEEeCCCCeEEEEECCC---CC
Confidence 3455678888888776543 1111 11 00 0048899999998 5899999889999999863 33
Q ss_pred cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC-----------CCCeEEEEcCCC---cEEEecCccc
Q 010579 119 PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT-----------MNMAIRKISDTG---VTTIAGGKWS 183 (507)
Q Consensus 119 i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs-----------~N~rIrk~d~~G---VstIaGG~~g 183 (507)
.......+ ..+ ..-..|.+++++++|+ ||+++. .++.|++++..+ +..+..+
T Consensus 68 ~~~~~~~~--~~~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--- 134 (337)
T 1pby_B 68 TLGRIDLS--TPE--------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--- 134 (337)
T ss_dssp EEEEEECC--BTT--------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC---
T ss_pred eEeeEEcC--Ccc--------cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC---
Confidence 33222111 000 0012588999999995 999863 358899999654 2333211
Q ss_pred CCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 184 RGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 184 ~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
..|.++++.++...||++ ++.|+.+++.+..+
T Consensus 135 ---------------~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~ 166 (337)
T 1pby_B 135 ---------------RQITMLAWARDGSKLYGL---GRDLHVMDPEAGTL 166 (337)
T ss_dssp ---------------SSCCCEEECTTSSCEEEE---SSSEEEEETTTTEE
T ss_pred ---------------CCcceeEECCCCCEEEEe---CCeEEEEECCCCcE
Confidence 136677753333448888 47788888875543
No 93
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.95 E-value=6.9e-05 Score=79.44 Aligned_cols=121 Identities=16% Similarity=0.166 Sum_probs=73.8
Q ss_pred CeeEEEEcC----CCcEEEEeCC------------CCeEEEEeCCCCC--CCccEEEe-cCCCCccccCCCCcccccCCC
Q 010579 84 EPFSVAVSP----SGELLVLDSE------------NSNIYKISTSLSP--YSRPKLVA-GSPEGYYGHVDGRPRGARMNH 144 (507)
Q Consensus 84 ~P~gIaVd~----dG~LYVaDs~------------n~rI~ki~~~g~~--~g~i~~va-G~~~G~~G~~dG~~~~a~fn~ 144 (507)
.+.+|+++| +|.|||+++. .++|.+++.+... .+...+++ +.+. .....
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------------~~~H~ 145 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------------SKDHQ 145 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------------CSSCC
T ss_pred ceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------------CCCCC
Confidence 577999999 7899999974 4689999864211 01122232 2110 12356
Q ss_pred cceEEEcCCCCEEEEeC--C------------------------------CCeEEEEcCCCcEEEecCcccCCCCCCCCC
Q 010579 145 PKGLAVDDRGNIYIADT--M------------------------------NMAIRKISDTGVTTIAGGKWSRGVGHVDGP 192 (507)
Q Consensus 145 P~GIaVd~dGnIYVADs--~------------------------------N~rIrk~d~~GVstIaGG~~g~~~G~~dg~ 192 (507)
+.+|++++||+|||+-. + ..+|.+|+.+|- +.-+.... .+ ....
T Consensus 146 ~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~--ip~~Npf~-~~-~~~e 221 (454)
T 1cru_A 146 SGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGS--IPKDNPSF-NG-VVSH 221 (454)
T ss_dssp EEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSC--CCTTCCEE-TT-EECS
T ss_pred CCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCC--CCCCCCCC-CC-Ccce
Confidence 88999999999999833 2 257888887771 11000000 00 0000
Q ss_pred ccCccCCCCceEEEEcCCCeEEEEeCCCC
Q 010579 193 SEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 221 (507)
Q Consensus 193 ~~~a~f~~P~gIa~vd~~G~LyVaD~gn~ 221 (507)
.-...+.+|+++++ +.+|.||++|.+.+
T Consensus 222 i~a~G~RNp~gla~-dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 222 IYTLGHRNPQGLAF-TPNGKLLQSEQGPN 249 (454)
T ss_dssp EEEBCCSEEEEEEE-CTTSCEEEEEECSS
T ss_pred EEEECCCCcceEEE-CCCCCEEEEecCCC
Confidence 11123678999996 56899999998654
No 94
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.93 E-value=0.00039 Score=66.71 Aligned_cols=117 Identities=13% Similarity=0.083 Sum_probs=78.9
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs 161 (507)
.|.+++++++|. ||+++..++.|..++.+.. .+....+.... . -..|.+|+++++|+ ||+++.
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~----~----------~~~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD-DGALTFAAESA----L----------PGSLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEE----C----------SSCCSEEEECTTSSEEEEEET
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCC-CCceeeccccc----c----------CCCCcEEEEcCCCCEEEEEec
Confidence 688999999987 8999887789988776411 13333221110 0 12688999999998 889998
Q ss_pred CCCeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 162 MNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 162 ~N~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
..+.|.+++. +| ...+..-. ....|.++++.++...||+++...+.|+.+++..
T Consensus 104 ~~~~i~~~d~~~~~~~~~~~~~~---------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPVGVVDVVE---------------GLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp TTTEEEEEEEETTEEEEEEEEEC---------------CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCeEEEEECCCCcccccccccc---------------CCCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 8888998885 33 11111000 0124677876444456999998889999999876
No 95
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.91 E-value=0.00071 Score=67.64 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=80.2
Q ss_pred CCCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE----EEecCCCCccccCCCCcccccCCCcceEE-EcCCCC
Q 010579 82 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK----LVAGSPEGYYGHVDGRPRGARMNHPKGLA-VDDRGN 155 (507)
Q Consensus 82 ~~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~----~vaG~~~G~~G~~dG~~~~a~fn~P~GIa-Vd~dGn 155 (507)
+..|.+++++|||. ||+++..+++|..++.+.. .|... .+...+.+..|. .+.. .....|.+|+ +++||+
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~g~-~~~~--~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFPLIPPGIPDR-DPET--GKGLYRADVCALTFSGK 267 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEESSCTTCCCB-CTTT--SSBSEEEEEEEECTTSS
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEEcCCCCcCCc-cccc--ccccccccEEEECCCCC
Confidence 34699999999995 8899887788888764311 13322 122111111111 0000 0112588999 999997
Q ss_pred -EEEEeCCCC-----eEEEEc--CCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEc---CCCeEEEEeCCCCeE
Q 010579 156 -IYIADTMNM-----AIRKIS--DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG---SSCSLLVIDRGNQAI 223 (507)
Q Consensus 156 -IYVADs~N~-----rIrk~d--~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd---~~G~LyVaD~gn~rI 223 (507)
||+++...+ +|.+++ .+| +..+...... .-..|.++++.+ +...||+++..++.|
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-------------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-------------PTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-------------SSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-------------CCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 899987665 788776 345 4332110000 012456677655 567899999888999
Q ss_pred EEEECCCC
Q 010579 224 REIQLHDD 231 (507)
Q Consensus 224 r~I~l~~~ 231 (507)
+.++.+..
T Consensus 335 ~v~~~~~~ 342 (365)
T 1jof_A 335 EIYRWKDE 342 (365)
T ss_dssp EEEEEETT
T ss_pred EEEEEchh
Confidence 88887655
No 96
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.90 E-value=0.00055 Score=67.94 Aligned_cols=123 Identities=16% Similarity=0.165 Sum_probs=81.2
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.+++++.|. +.||++|. .++|..+|+.+ .++ ..+.-. . +| ..+..++.+... +|.||++...
T Consensus 128 eG~glt~dg-~~L~~SdG-s~~i~~iDp~T---~~v~~~I~V~---~----~g----~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 128 EGWGLTHND-QYLIMSDG-TPVLRFLDPES---LTPVRTITVT---A----HG----EELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp CCCCEEECS-SCEEECCS-SSEEEEECTTT---CSEEEEEECE---E----TT----EECCCEEEEEEE-TTEEEEEETT
T ss_pred CceEEecCC-CEEEEECC-CCeEEEEcCCC---CeEEEEEEec---c----CC----ccccccceeEEE-CCEEEEEEcc
Confidence 466777653 57999995 78999999873 222 222110 0 11 135667778776 7999999999
Q ss_pred CCeEEEEcC-CC-c-EEEec-CcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 163 NMAIRKISD-TG-V-TTIAG-GKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 163 N~rIrk~d~-~G-V-stIaG-G~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
.+.|.+||. +| | .+|.- +.... . . .......-|+|||+++..++|||+...=-++.+|.+.
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~-~---~--~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAE-A---G--PLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGG-S---C--SCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccc-c---c--cccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 999999995 44 3 44422 11100 0 0 0112345789999988889999999888888888763
No 97
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.87 E-value=0.0021 Score=63.12 Aligned_cols=125 Identities=15% Similarity=0.159 Sum_probs=82.1
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.+++++-| .+.||++|. .++|..+|+.+ .++ ..+. . +. +| ..+..++.+... +|.||++...
T Consensus 106 ~Gwglt~d-g~~L~vSdg-s~~l~~iDp~t---~~~~~~I~-V--~~----~g----~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 106 EGWALTSD-DSHLYMSDG-TAVIRKLDPDT---LQQVGSIK-V--TA----GG----RPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp CCCEEEEC-SSCEEEECS-SSEEEEECTTT---CCEEEEEE-C--EE----TT----EECCCEEEEEEE-TTEEEEEETT
T ss_pred CceEEeeC-CCEEEEECC-CCeEEEEeCCC---CeEEEEEE-E--cc----CC----cccccceeeEEe-CCEEEEEECC
Confidence 56788865 358999995 89999999873 222 2221 1 00 11 134566777766 7899999999
Q ss_pred CCeEEEEcC-CC-c-EEEec-CcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 163 NMAIRKISD-TG-V-TTIAG-GKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 163 N~rIrk~d~-~G-V-stIaG-G~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
.+.|.+||. +| | .+|.- +.... ... .......-|+|||+++..++|||+...=-++.+|.+..
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~-~~~----~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~~ 235 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPD-ADA----LTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLTP 235 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTT-TTS----CCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEECC
T ss_pred CCeEEEEECCCCCEEEEEECCcCccc-ccc----ccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEec
Confidence 999999995 45 3 44421 11100 000 00123457899999888899999999888999988753
No 98
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.84 E-value=0.0013 Score=70.81 Aligned_cols=144 Identities=10% Similarity=-0.004 Sum_probs=92.9
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcC----CCC-E
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD----RGN-I 156 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~----dGn-I 156 (507)
.|++++++|||. ||+++.. +.|.+|+.+.. .+++ ..+.. | ..|.+|++++ ||+ |
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~-t~~~~~~i~~------g-----------~~p~~va~sp~~~~dg~~l 240 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-ARIDMIDLWAK-EPTKVAEIKI------G-----------IEARSVESSKFKGYEDRYT 240 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-SEEEEEETTSS-SCEEEEEEEC------C-----------SEEEEEEECCSTTCTTTEE
T ss_pred ccceEEECCCCCEEEEECCC-CeEEEEECcCC-CCcEEEEEec------C-----------CCcceEEeCCCcCCCCCEE
Confidence 388999999986 8888876 99999998310 1222 22211 1 2589999999 987 9
Q ss_pred EEEeCCCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 157 YIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 157 YVADs~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
||++...+.|.++|... +.++...... .++. .-..-..+.+|++.++...+||+....+.|+.++.....+
T Consensus 241 ~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~-----~~~~-~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~ 314 (543)
T 1nir_A 241 IAGAYWPPQFAIMDGETLEPKQIVSTRGMT-----VDTQ-TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN 314 (543)
T ss_dssp EEEEEESSEEEEEETTTCCEEEEEECCEEC-----SSSC-CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS
T ss_pred EEEEccCCeEEEEeccccccceeecccCcc-----cCcc-ccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc
Confidence 99998888999999543 4555431110 0000 0000124567776556778999999999999999876443
Q ss_pred e---eCCCCCccceEEEEecce
Q 010579 234 S---DNYDDTFHLGIFVLVAAA 252 (507)
Q Consensus 234 ~---~~~~~G~p~gIa~~~~a~ 252 (507)
. ......+|.++++.....
T Consensus 315 l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 315 LTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp CEEEEEECCSSCCCEEECTTSC
T ss_pred ceeEEeccCcCccCceECCCCC
Confidence 2 122234677777765544
No 99
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.78 E-value=0.00071 Score=65.22 Aligned_cols=145 Identities=15% Similarity=0.173 Sum_probs=88.9
Q ss_pred EEecCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCC
Q 010579 39 VVSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYS 117 (507)
Q Consensus 39 va~ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g 117 (507)
+.....+.|+.+|..+++.. ..+.. +. ...|.+++++++|. +|++...++.|++++..+ +
T Consensus 15 v~~~~~~~v~~~d~~~~~~~-----~~~~~---------~~--~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---~ 75 (349)
T 1jmx_B 15 IVTNYPNNLHVVDVASDTVY-----KSCVM---------PD--KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---C 75 (349)
T ss_dssp EEEETTTEEEEEETTTTEEE-----EEEEC---------SS--CCSSCEEEECTTSSEEEEEETTTTEEEEEETTT---T
T ss_pred EEeCCCCeEEEEECCCCcEE-----EEEec---------CC--CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC---C
Confidence 55566788888888776544 11110 10 01488999999986 899998899999999862 4
Q ss_pred ccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC-----------CCeEEEEcCCC---c---EEEec
Q 010579 118 RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM-----------NMAIRKISDTG---V---TTIAG 179 (507)
Q Consensus 118 ~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~-----------N~rIrk~d~~G---V---stIaG 179 (507)
+.......... . ...-..|.+++++++|+ ||+++.. ++.|.++|... . .++..
T Consensus 76 ~~~~~~~~~~~-~--------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 146 (349)
T 1jmx_B 76 KNTFHANLSSV-P--------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM 146 (349)
T ss_dssp EEEEEEESCCS-T--------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC
T ss_pred cEEEEEEcccc-c--------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC
Confidence 43322211100 0 00123588999999997 8888754 57888888432 1 11110
Q ss_pred CcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 180 GKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 180 G~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+ ..+.++++ +++|.||+++ +.|+.+++.+..+
T Consensus 147 ------------~------~~~~~~~~-s~dg~l~~~~---~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 147 ------------P------RQVYLMRA-ADDGSLYVAG---PDIYKMDVKTGKY 178 (349)
T ss_dssp ------------C------SSCCCEEE-CTTSCEEEES---SSEEEECTTTCCE
T ss_pred ------------C------CcccceeE-CCCCcEEEcc---CcEEEEeCCCCce
Confidence 0 13556664 5666677753 3488888766554
No 100
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.75 E-value=0.00099 Score=70.29 Aligned_cols=97 Identities=8% Similarity=0.030 Sum_probs=65.0
Q ss_pred cEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeC---------CCCeEEEEeCCCC
Q 010579 45 KWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSLS 114 (507)
Q Consensus 45 ~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs---------~n~rI~ki~~~g~ 114 (507)
+.|.++|..+.++. ..... +..| +|+++|||. |||++. ..+.|.+||...
T Consensus 99 ~~VsVID~~t~~vv--------------~~I~v----G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t- 158 (426)
T 3c75_H 99 TQQFVIDGSTGRIL--------------GMTDG----GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT- 158 (426)
T ss_dssp EEEEEEETTTTEEE--------------EEEEE----CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-
T ss_pred CeEEEEECCCCEEE--------------EEEEC----CCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC-
Confidence 67777777776655 11111 1369 999999985 999986 356899999863
Q ss_pred CCCcc-EEE-ecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC-CCeEEEEcCCC
Q 010579 115 PYSRP-KLV-AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM-NMAIRKISDTG 173 (507)
Q Consensus 115 ~~g~i-~~v-aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~-N~rIrk~d~~G 173 (507)
.++ ..+ ++..... .....|.++++++||. +||++.. .+.|.+||...
T Consensus 159 --~~vv~~I~v~g~~r~----------~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 159 --FLPIADIELPDAPRF----------LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp --CCEEEEEEETTCCCC----------CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred --CcEEEEEECCCcccc----------ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 332 222 2211000 0125799999999997 9999875 78999999655
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.69 E-value=0.0023 Score=64.14 Aligned_cols=109 Identities=13% Similarity=0.088 Sum_probs=78.6
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs 161 (507)
.|.+++++++|. ||++....++|+.++... ++....... ...|.+++++++|. ||+++.
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPV----------------FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEEC----------------SSSEEEEEECTTSSEEEEEEC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecC----------------CCCCCeEEEcCCCCEEEEEec
Confidence 588999999984 999999999999999862 333322211 13578999999997 888887
Q ss_pred CCC--------------eEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEE
Q 010579 162 MNM--------------AIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIR 224 (507)
Q Consensus 162 ~N~--------------rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr 224 (507)
.++ .|++++.. + +.++.+ -..|.++++.++...|++++..++.|+
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~------------------~~~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA------------------GNQPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC------------------SSSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEEecC------------------CCCCceEEEcCCCCEEEEEECCCCeEE
Confidence 643 89999954 3 333321 124678886555556788888889999
Q ss_pred EEECC
Q 010579 225 EIQLH 229 (507)
Q Consensus 225 ~I~l~ 229 (507)
.++++
T Consensus 427 v~~~~ 431 (433)
T 3bws_A 427 VYRRD 431 (433)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 99875
No 102
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.67 E-value=0.00032 Score=67.69 Aligned_cols=118 Identities=8% Similarity=0.012 Sum_probs=79.2
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN 163 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~N 163 (507)
++|+++.+++.+||+...++.|++++... +++......+ ....|.+++++++|+ +||++..+
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~---~~~~~~~~~~--------------~~~~~~~~~~s~dg~~~~v~~~~~ 64 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVAS---DTVYKSCVMP--------------DKFGPGTAMMAPDNRTAYVLNNHY 64 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTT---TEEEEEEECS--------------SCCSSCEEEECTTSSEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCC---CcEEEEEecC--------------CCCCCceeEECCCCCEEEEEeCCC
Confidence 35677888899999999999999999862 4333222111 012488999999997 89999999
Q ss_pred CeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC-----------CCeEEEEECC
Q 010579 164 MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-----------NQAIREIQLH 229 (507)
Q Consensus 164 ~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g-----------n~rIr~I~l~ 229 (507)
+.|.+++.. + +.++..+.. + ...-..|.++++.++...||+++.. ++.|+.+++.
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~---------~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSV---------P--GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCS---------T--TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred CcEEEEeCCCCcEEEEEEcccc---------c--ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC
Confidence 999999954 3 233321110 0 0012357888865445578888854 6899999987
Q ss_pred C
Q 010579 230 D 230 (507)
Q Consensus 230 ~ 230 (507)
+
T Consensus 134 ~ 134 (349)
T 1jmx_B 134 D 134 (349)
T ss_dssp G
T ss_pred C
Confidence 6
No 103
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.67 E-value=0.0011 Score=66.23 Aligned_cols=130 Identities=18% Similarity=0.135 Sum_probs=80.1
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEe
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVAD 160 (507)
..|++++++|||. ||++|.+.++|+.++.+. .++...+... ... . .-..|.++++++||+ |||++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~--~g~~~~~~~~----~~~-~------~g~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLA--SGEVELVGSV----DAP-D------PGDHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECT--TSCEEEEEEE----ECS-S------TTCCEEEEEECTTSSEEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECC--CCCEEEeeeE----ecC-C------CCCCCCEeEECCCCCEEEEEE
Confidence 5799999999996 899998889999998751 1333322110 000 0 013699999999996 89999
Q ss_pred CCCCeEEEEc--C-CC-cE----EEecCcccCCCCCCCCCccCccCCCCceEE-EEcCCCeEEEEeCCCC-----eEEEE
Q 010579 161 TMNMAIRKIS--D-TG-VT----TIAGGKWSRGVGHVDGPSEDAKFSNDFDVV-YVGSSCSLLVIDRGNQ-----AIREI 226 (507)
Q Consensus 161 s~N~rIrk~d--~-~G-Vs----tIaGG~~g~~~G~~dg~~~~a~f~~P~gIa-~vd~~G~LyVaD~gn~-----rIr~I 226 (507)
..+++|.+++ . .| +. ++.....+. .+. .++.. ....|.+++ +.++...||+++++.+ .|+.+
T Consensus 212 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~-~g~-~~~~~--~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~ 287 (365)
T 1jof_A 212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGI-PDR-DPETG--KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGF 287 (365)
T ss_dssp TTTTEEEEEEECTTTCCEEEEEEEEESSCTTC-CCB-CTTTS--SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEE
T ss_pred CCCCeEEEEEEeCCCCcEEEccceEEcCCCCc-CCc-ccccc--cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEE
Confidence 8888888875 2 35 22 121111000 000 00000 122577888 6444446999998766 89999
Q ss_pred ECC
Q 010579 227 QLH 229 (507)
Q Consensus 227 ~l~ 229 (507)
+++
T Consensus 288 ~~~ 290 (365)
T 1jof_A 288 KLR 290 (365)
T ss_dssp EEC
T ss_pred EEC
Confidence 875
No 104
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.66 E-value=0.00021 Score=70.56 Aligned_cols=79 Identities=20% Similarity=0.304 Sum_probs=59.6
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
..+.+|++|| .|+|||+...+++|..++.. |++.-+.--..|+.| ....+..|.|||+|++|+|||+.-
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~----g~~~~~~~L~~g~~~------l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLV----GEVIGEMSLTKGSRG------LSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECSTTGGG------CSSCCCSEEEEEECTTCCEEEEET
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCC----CCEEEEEEcCCccCC------cccccCCCCeeEECCCCCEEEEcC
Confidence 5789999999 78999999999999999997 444433322223322 123478999999999999999965
Q ss_pred CCCeEEEEcCC
Q 010579 162 MNMAIRKISDT 172 (507)
Q Consensus 162 ~N~rIrk~d~~ 172 (507)
.| .+++|...
T Consensus 243 ~n-~~y~f~~~ 252 (255)
T 3qqz_A 243 PN-RFYRFTPQ 252 (255)
T ss_dssp TT-EEEEEEC-
T ss_pred Cc-eEEEEEec
Confidence 54 89999753
No 105
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.65 E-value=0.0034 Score=64.25 Aligned_cols=109 Identities=8% Similarity=-0.030 Sum_probs=69.0
Q ss_pred CeeEEEEcCCCc-EEEEeC---------CCCeEEEEeCCCCCCCcc-EEE-ecCCCCccccCCCCcccccCCCcceEEEc
Q 010579 84 EPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSLSPYSRP-KLV-AGSPEGYYGHVDGRPRGARMNHPKGLAVD 151 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs---------~n~rI~ki~~~g~~~g~i-~~v-aG~~~G~~G~~dG~~~~a~fn~P~GIaVd 151 (507)
.| +|+++|||. |||++. ..+.|.+|+... .++ ..+ ++.. + .......|.+++++
T Consensus 68 ~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t---~~~~~~i~~~~~--------~--~~~~g~~p~~~~~s 133 (373)
T 2mad_H 68 LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT---FLPIADIELPDA--------P--RFDVGPYSWMNANT 133 (373)
T ss_pred CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC---CcEEEEEECCCc--------c--ccccCCCccceEEC
Confidence 58 999999985 999985 246789998752 221 111 1100 0 00012479999999
Q ss_pred CCCC-EEEEeCC-CCeEEEEcCCC---cEE-EecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEE
Q 010579 152 DRGN-IYIADTM-NMAIRKISDTG---VTT-IAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIRE 225 (507)
Q Consensus 152 ~dGn-IYVADs~-N~rIrk~d~~G---Vst-IaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~ 225 (507)
+||+ |||+... .+.|.+|| .. +.+ +. .|.++.+.+....+|++....+++..
T Consensus 134 pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~---------------------~~~~~~~~~~~~~~~~~~~~dg~~~~ 191 (373)
T 2mad_H 134 PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS---------------------SPTCYHIHPGAPSTFYLLCAQGGLAK 191 (373)
T ss_pred CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC---------------------CCceEEEEeCCCceEEEEcCCCCEEE
Confidence 9998 9999865 68899999 65 223 21 12223334455566777777777777
Q ss_pred EEC
Q 010579 226 IQL 228 (507)
Q Consensus 226 I~l 228 (507)
|+.
T Consensus 192 vd~ 194 (373)
T 2mad_H 192 TDH 194 (373)
T ss_pred EEC
Confidence 776
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.58 E-value=0.0052 Score=61.54 Aligned_cols=130 Identities=16% Similarity=0.138 Sum_probs=85.3
Q ss_pred CeeEEEEcCCCc-EEEEeC-------CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC
Q 010579 84 EPFSVAVSPSGE-LLVLDS-------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 155 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs-------~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn 155 (507)
.|.+++++++|. |+++.. .++.|+.++... +......+. -..|.+++++++|+
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~---~~~~~~~~~----------------~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK---EKLIDTIGP----------------PGNKRHIVSGNTEN 315 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT---TEEEEEEEE----------------EECEEEEEECSSTT
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC---CcEEeeccC----------------CCCcceEEECCCCC
Confidence 589999999985 666664 356899999762 333222211 12577999999995
Q ss_pred -EEEEeCCCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCC-----------
Q 010579 156 -IYIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN----------- 220 (507)
Q Consensus 156 -IYVADs~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn----------- 220 (507)
||++...+++|++++... +.++.. ...|.++++.++...||+++..+
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~------------------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIPV------------------FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEEC------------------SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEecC------------------CCCCCeEEEcCCCCEEEEEecCCCcccccccccc
Confidence 999999999999999654 233311 12466787644444688888764
Q ss_pred ---CeEEEEECCCCceeeC-CCCCccceEEEEec
Q 010579 221 ---QAIREIQLHDDDCSDN-YDDTFHLGIFVLVA 250 (507)
Q Consensus 221 ---~rIr~I~l~~~~~~~~-~~~G~p~gIa~~~~ 250 (507)
+.|+.+++....+... .....+.++++...
T Consensus 378 ~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 411 (433)
T 3bws_A 378 LVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPD 411 (433)
T ss_dssp SSCCEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred ccceEEEEEECCCCcEEEEecCCCCCceEEEcCC
Confidence 4899999877654432 22334556665443
No 107
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.57 E-value=0.003 Score=65.88 Aligned_cols=143 Identities=10% Similarity=0.018 Sum_probs=88.0
Q ss_pred ceEeEEEecC----CcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeC-------
Q 010579 34 GIVSNVVSAL----VKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDS------- 101 (507)
Q Consensus 34 G~l~~va~ag----~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs------- 101 (507)
+....+++.. .+.|+++|..+.++. ..+. . +..|. |+++|||. |||++.
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~-----~~I~---------v----G~~P~-va~spDG~~lyVan~~~~r~~~ 104 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVI-----GMID---------G----GFLPN-PVVADDGSFIAHASTVFSRIAR 104 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEE-----EEEE---------E----CSSCE-EEECTTSSCEEEEEEEEEETTE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEE-----EEEE---------C----CCCCc-EEECCCCCEEEEEccccccccc
Confidence 4444466654 578888888887765 1111 1 23585 99999986 999985
Q ss_pred --CCCeEEEEeCCCCCCCcc-EEE-ecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC-CCeEEEEcCCC--
Q 010579 102 --ENSNIYKISTSLSPYSRP-KLV-AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM-NMAIRKISDTG-- 173 (507)
Q Consensus 102 --~n~rI~ki~~~g~~~g~i-~~v-aG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~-N~rIrk~d~~G-- 173 (507)
..+.|.+||..+ .++ ..+ ++.+.. . ..-..|.++++++||. +||++.. .+.|.+||...
T Consensus 105 G~~~~~VsviD~~t---~~v~~~I~v~~g~r--~--------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 105 GERTDYVEVFDPVT---LLPTADIELPDAPR--F--------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp EEEEEEEEEECTTT---CCEEEEEEETTCCC--C--------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CCCCCEEEEEECCC---CeEEEEEECCCccc--c--------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 246799999873 332 222 221100 0 0124799999999998 9999874 78999999654
Q ss_pred -cEEEec-CcccCCCCCCCCCccCccCCCCce---EEEEcCCCeEEEEeCCC-CeE
Q 010579 174 -VTTIAG-GKWSRGVGHVDGPSEDAKFSNDFD---VVYVGSSCSLLVIDRGN-QAI 223 (507)
Q Consensus 174 -VstIaG-G~~g~~~G~~dg~~~~a~f~~P~g---Ia~vd~~G~LyVaD~gn-~rI 223 (507)
+.+|.- +.. ...|.+ .+.+..+|.+++.|... +++
T Consensus 172 vv~tI~v~g~~---------------~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 172 FKRMLDVPDCY---------------HIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEEECCSEE---------------EEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred EEEEEECCCcc---------------eeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 455532 110 112333 12345677777777764 565
No 108
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.56 E-value=0.00088 Score=66.70 Aligned_cols=108 Identities=13% Similarity=0.137 Sum_probs=76.9
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 164 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~ 164 (507)
-.||.++ ++.||++....++|+++++.. +++..-. .+... ...||+++. +.||+++..++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~T---gkv~~~~-l~~~~--------------FgeGit~~g-~~Ly~ltw~~~ 116 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLES---AQPVWME-RLGNI--------------FAEGLASDG-ERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSC---SSCSEEE-ECTTC--------------CEEEEEECS-SCEEEEESSSC
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCC---CcEEeEE-CCCCc--------------ceeEEEEeC-CEEEEEEccCC
Confidence 4799998 479999999999999999873 4432222 11111 234788874 47999999999
Q ss_pred eEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 165 AIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 165 rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
++.++|... +.+|.-. ..+++++. +.+.||++| +.++|+.||+.+...
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~------------------~eGwGLt~--Dg~~L~vSd-Gs~~l~~iDp~T~~v 167 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYS------------------GEGWGLCY--WNGKLVRSD-GGTMLTFHEPDGFAL 167 (268)
T ss_dssp EEEEEETTTTEEEEEEECS------------------SCCCCEEE--ETTEEEEEC-SSSEEEEECTTTCCE
T ss_pred EEEEEECCcCcEEEEEeCC------------------CceeEEec--CCCEEEEEC-CCCEEEEEcCCCCeE
Confidence 999999765 3444321 13467763 467999999 689999999887543
No 109
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.50 E-value=0.0048 Score=67.16 Aligned_cols=99 Identities=10% Similarity=0.056 Sum_probs=67.9
Q ss_pred EEecCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCC
Q 010579 39 VVSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYS 117 (507)
Q Consensus 39 va~ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g 117 (507)
++....+.|+.+|..++++. ..+.. +..|+++++++||. |||++. .+.|.+|+.......
T Consensus 171 V~~~~~~~V~viD~~t~~v~-----~~i~~-------------g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~ 231 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTYEIK-----TVLDT-------------GYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPT 231 (567)
T ss_dssp EEETTTTEEEEEETTTCCEE-----EEEEC-------------SSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCC
T ss_pred EEeCCCCeEEEEECCCCeEE-----EEEeC-------------CCCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCc
Confidence 66667788888888777655 11111 23689999999986 788864 679999998300001
Q ss_pred ccEEEecCCCCccccCCCCcccccCCCcceEEEc----CCCC-EEEEeCCCCeEEEEcCCC
Q 010579 118 RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD----DRGN-IYIADTMNMAIRKISDTG 173 (507)
Q Consensus 118 ~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd----~dGn-IYVADs~N~rIrk~d~~G 173 (507)
.+..+.. | ..|.+|+++ +||. +||++...+.|.+||...
T Consensus 232 ~v~~i~~------G-----------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 232 TVAEIKI------G-----------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEEEEC------C-----------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred EeEEEec------C-----------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 1222211 1 258999999 5886 999999999999999544
No 110
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.43 E-value=0.0013 Score=68.05 Aligned_cols=112 Identities=5% Similarity=-0.054 Sum_probs=72.9
Q ss_pred CeeEEEEcCCC-cEEEEeC---------CCCeEEEEeCCCCCCCcc-EEE-ecCCCCccccCCCCcccccCCCcceEEEc
Q 010579 84 EPFSVAVSPSG-ELLVLDS---------ENSNIYKISTSLSPYSRP-KLV-AGSPEGYYGHVDGRPRGARMNHPKGLAVD 151 (507)
Q Consensus 84 ~P~gIaVd~dG-~LYVaDs---------~n~rI~ki~~~g~~~g~i-~~v-aG~~~G~~G~~dG~~~~a~fn~P~GIaVd 151 (507)
.| +|++++|| .|||++. ..+.|.+||+.. +++ ..+ +|.+.+ ......|.+|+++
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T---~~vv~~I~v~~~~~----------~~~g~~P~~ia~S 132 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT---FLPIADIELPDAPR----------FSVGPRVHIIGNC 132 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT---CCEEEEEEETTSCS----------CCBSCCTTSEEEC
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---CCEEEEEECCCccc----------cccCCCcceEEEc
Confidence 69 99999988 5999984 357899999873 332 233 221100 0112579999999
Q ss_pred CCCC-EEEEeCC-CCeEEE--EcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEE
Q 010579 152 DRGN-IYIADTM-NMAIRK--ISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQ 227 (507)
Q Consensus 152 ~dGn-IYVADs~-N~rIrk--~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~ 227 (507)
+||. +||++.. .+.|.+ ||...+.+|.-+ + . ..+ .+....+|++....+++..++
T Consensus 133 pDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~------~----~---------~~~--~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA------S----C---------FHI--HPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp TTSSCEEEEECSSSCEEEEEETTTEEEEEEECS------S----C---------CCC--EEEETTEEECCCCTTSCEEEE
T ss_pred CCCCEEEEEccCCCCeEEEEEEchhhceEEECC------C----c---------eEE--ccCCCeEEEEEcCCCCEEEEE
Confidence 9996 9999876 677888 886555555311 0 0 011 234456777777777777777
Q ss_pred CCC
Q 010579 228 LHD 230 (507)
Q Consensus 228 l~~ 230 (507)
+..
T Consensus 192 ~~~ 194 (368)
T 1mda_H 192 LAA 194 (368)
T ss_dssp CCS
T ss_pred Ccc
Confidence 764
No 111
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.40 E-value=0.0012 Score=69.01 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=76.5
Q ss_pred cCCC-cEEEEeCC----CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC--
Q 010579 91 SPSG-ELLVLDSE----NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM-- 162 (507)
Q Consensus 91 d~dG-~LYVaDs~----n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~-- 162 (507)
.|+| .|||+|.. .++|.+||... +++...+-. | ..| +|++++||. +||+++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t---~~v~~~I~v-----G-----------~~P-~va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEA---GRVIGMIDG-----G-----------FLP-NPVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTT---TEEEEEEEE-----C-----------SSC-EEEECTTSSCEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCC---CeEEEEEEC-----C-----------CCC-cEEECCCCCEEEEEccccc
Confidence 4565 59999986 68999999862 333222211 1 247 499999998 9999852
Q ss_pred -------CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC-CCeEEEEECCCC
Q 010579 163 -------NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHDD 231 (507)
Q Consensus 163 -------N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g-n~rIr~I~l~~~ 231 (507)
.+.|.+||... +.+|.-+. |.. ...-..|.++++.++...|||++.. .+.|..||+.+.
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~---------g~r-~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPD---------APR-FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETT---------CCC-CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCC---------ccc-cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 45699999655 34442110 000 0012378999976666679999975 799999999887
Q ss_pred ceee
Q 010579 232 DCSD 235 (507)
Q Consensus 232 ~~~~ 235 (507)
....
T Consensus 171 ~vv~ 174 (386)
T 3sjl_D 171 AFKR 174 (386)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6543
No 112
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.33 E-value=0.013 Score=59.09 Aligned_cols=81 Identities=10% Similarity=0.121 Sum_probs=52.7
Q ss_pred EEEcCCCC-EEEEeC----------CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeE
Q 010579 148 LAVDDRGN-IYIADT----------MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSL 213 (507)
Q Consensus 148 IaVd~dGn-IYVADs----------~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~L 213 (507)
++++++|+ +||+.. ..+.|.+||... +.++..+ . |.+|++.++...|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~------------------~-p~~ia~spdg~~l 319 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR------------------D-ALSMTIDQQRNLM 319 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT------------------T-CCEEEEETTTTEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC------------------C-eeEEEECCCCCEE
Confidence 77777644 777653 134677777543 3333211 1 8899987666788
Q ss_pred EEEeCCCCeEEEEECCCC--ceeeC-CC-CCccceEEEEe
Q 010579 214 LVIDRGNQAIREIQLHDD--DCSDN-YD-DTFHLGIFVLV 249 (507)
Q Consensus 214 yVaD~gn~rIr~I~l~~~--~~~~~-~~-~G~p~gIa~~~ 249 (507)
|+++. +.|..|+..+. .+... .. ...|.++++.-
T Consensus 320 ~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 320 LTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp EEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred EEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 98885 99999999887 65443 23 34678887654
No 113
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.32 E-value=0.0015 Score=68.98 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=74.7
Q ss_pred cEEEEeCCC----CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC--------
Q 010579 95 ELLVLDSEN----SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT-------- 161 (507)
Q Consensus 95 ~LYVaDs~n----~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs-------- 161 (507)
.+||++... +.|.+||... .++...+-. | ..| ||++++||+ |||+++
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~t---~~vv~~I~v-----G-----------~~P-gia~SpDgk~lyVan~~~~~~~~G 145 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGST---GRILGMTDG-----G-----------FLP-HPVAAEDGSFFAQASTVFERIARG 145 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETTT---TEEEEEEEE-----C-----------SSC-EEEECTTSSCEEEEEEEEEETTEE
T ss_pred EEEEECCCcCCCCCeEEEEECCC---CEEEEEEEC-----C-----------CCC-ceEECCCCCEEEEEeccccccccC
Confidence 599999865 7999999862 333221111 1 258 999999997 999986
Q ss_pred -CCCeEEEEcCCC---cEEEe-cCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC-CCeEEEEECCCCcee
Q 010579 162 -MNMAIRKISDTG---VTTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHDDDCS 234 (507)
Q Consensus 162 -~N~rIrk~d~~G---VstIa-GG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g-n~rIr~I~l~~~~~~ 234 (507)
..+.|.+||... +.+|. ++.. .......|.++++.++...|||++.. .+.|.+||+......
T Consensus 146 ~~~~~VsviD~~t~~vv~~I~v~g~~-----------r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 146 KRTDYVEVFDPVTFLPIADIELPDAP-----------RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEEEECTTTCCEEEEEEETTCC-----------CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCCCEEEEEECCCCcEEEEEECCCcc-----------ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 355799999654 44443 2110 00012468899876566689999975 799999999886654
No 114
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.31 E-value=0.0094 Score=60.94 Aligned_cols=83 Identities=11% Similarity=0.146 Sum_probs=52.5
Q ss_pred EEEcCCCC-EEEEeC---------CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC-eE
Q 010579 148 LAVDDRGN-IYIADT---------MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SL 213 (507)
Q Consensus 148 IaVd~dGn-IYVADs---------~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G-~L 213 (507)
++++++|+ |||+.. ..+.|.+||... +.+|..+ ..|.+|++..+.. .|
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g------------------~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG------------------HDVDAISVAQDGGPDL 333 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC------------------CCcCeEEECCCCCeEE
Confidence 67777654 777643 234677777544 3444221 1588998644444 47
Q ss_pred EEEeCCCCeEEEEECCCCceeeC-CC-CCccceEEEE
Q 010579 214 LVIDRGNQAIREIQLHDDDCSDN-YD-DTFHLGIFVL 248 (507)
Q Consensus 214 yVaD~gn~rIr~I~l~~~~~~~~-~~-~G~p~gIa~~ 248 (507)
|++..+.+.|..|+..+...... .. ...|.+|...
T Consensus 334 ~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~~~ 370 (373)
T 2mad_H 334 YALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVM 370 (373)
T ss_pred EEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEEEc
Confidence 88887899999999988665543 22 3357766654
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.29 E-value=0.015 Score=62.32 Aligned_cols=127 Identities=13% Similarity=0.073 Sum_probs=85.0
Q ss_pred CCCeeEEEEcC----CCc-EEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCC
Q 010579 82 GMEPFSVAVSP----SGE-LLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 155 (507)
Q Consensus 82 ~~~P~gIaVd~----dG~-LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn 155 (507)
+..|.+|+++| ||. ||+++...+.|..++... +++ .++...+ ... ++.. -..-..+.+|+++++|.
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t---~~~~~~i~~~g--~~~--~~~~-~~~~~~v~~i~~s~~~~ 292 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET---LEPKQIVSTRG--MTV--DTQT-YHPEPRVAAIIASHEHP 292 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT---CCEEEEEECCE--ECS--SSCC-EESCCCEEEEEECSSSS
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc---cccceeecccC--ccc--Cccc-cccCCceEEEEECCCCC
Confidence 35799999999 886 888887788999998752 333 2332211 100 1000 00012577999999765
Q ss_pred -EEEEeCCCCeEEEEcCCC---c--EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCe-EEEEeCCCCeEEEEEC
Q 010579 156 -IYIADTMNMAIRKISDTG---V--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQL 228 (507)
Q Consensus 156 -IYVADs~N~rIrk~d~~G---V--stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~-LyVaD~gn~rIr~I~l 228 (507)
+||+....++|..++... + +++..+ ..|.++++ +++|+ ||++....+.|..+++
T Consensus 293 ~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~------------------~~~~~~~~-spdg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 293 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAA------------------PFLHDGGW-DSSHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp EEEEEETTTTEEEEEECTTSSSCEEEEEECC------------------SSCCCEEE-CTTSCEEEEEEGGGTEEEEEET
T ss_pred EEEEEECCCCeEEEEEecCCCcceeEEeccC------------------cCccCceE-CCCCCEEEEEecCCCeEEEEEC
Confidence 888888899999999433 2 243211 25778886 55554 8999998999999999
Q ss_pred CCCceee
Q 010579 229 HDDDCSD 235 (507)
Q Consensus 229 ~~~~~~~ 235 (507)
.+..|..
T Consensus 354 ~tg~l~~ 360 (543)
T 1nir_A 354 KDRRLSA 360 (543)
T ss_dssp TTTEEEE
T ss_pred CCCeEEE
Confidence 8877654
No 116
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.14 E-value=0.0076 Score=60.77 Aligned_cols=98 Identities=10% Similarity=0.060 Sum_probs=63.2
Q ss_pred CcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEEcCCCc-EEEEeC---------CCCeEEEEeCCC
Q 010579 44 VKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSL 113 (507)
Q Consensus 44 ~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaVd~dG~-LYVaDs---------~n~rI~ki~~~g 113 (507)
.+.|+.+|..++++. .....| ..| +|++++||. |||++. ..+.|.+|+...
T Consensus 30 d~~v~v~D~~t~~~~-----~~i~~g-------------~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFL-----GMVPTA-------------FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp GCEEEEEETTTCCEE-----EEEECC-------------EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred cCeEEEEECCCCeEE-----EEecCC-------------CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 357788887766544 111111 258 999999985 999974 235699998752
Q ss_pred CCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC-CCeEEEEcCCC
Q 010579 114 SPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM-NMAIRKISDTG 173 (507)
Q Consensus 114 ~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~-N~rIrk~d~~G 173 (507)
.++ ..+.... +.. ..-..|.+|++++||+ |||+... .+.|.+||...
T Consensus 91 ---~~~~~~i~~~~-~~~---------~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 91 ---LTFEKEISLPP-KRV---------QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp ---CCEEEEEEECT-TBC---------CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred ---CcEEEEEEcCc-ccc---------ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 222 2221110 000 0125799999999997 9999876 68899999544
No 117
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.09 E-value=0.0094 Score=58.06 Aligned_cols=111 Identities=21% Similarity=0.224 Sum_probs=69.2
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCC---ccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEE
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYS---RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 159 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g---~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVA 159 (507)
.+-..|+++|+|.||.+ .++.++++++...... ...+.+|.. |..+ | ..+.+|++|+||++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-Gw~~----------F---~a~~fD~~G~LYav 104 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG-GWNQ----------F---QFLFFDPNGYLYAV 104 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS-CGGG----------C---SEEEECTTSCEEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc-cccc----------c---eEEEECCCCCEEEe
Confidence 35669999999999999 5678999998532110 012333331 1111 2 37999999999999
Q ss_pred eCCCCeEEEEcC--CCc------EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 160 DTMNMAIRKISD--TGV------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 160 Ds~N~rIrk~d~--~GV------stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
.+.+|+++++ ++- .+..|.. |. ..| .. ++.+++|.||.++ ++++.+-.+.
T Consensus 105 --~dG~iyr~~pP~~~~~~Wl~~a~~vg~~-----gw-------~~~---~~-lff~p~G~Lyav~--dg~lyr~~~P 162 (236)
T 1tl2_A 105 --SKDKLYKASPPQSDTDNWIARATEVGSG-----GW-------SGF---KF-LFFHPNGYLYAVH--GQQFYKALPP 162 (236)
T ss_dssp --ETTEEEEESCCCSTTCCHHHHSEEEECS-----SG-------GGE---EE-EEECTTSCEEEEE--TTEEEEECCC
T ss_pred --CCCEEEEeCCCcCCCCceeccccEeccC-----CC-------Cce---EE-EEECCCceEEEEe--CCcEEecCCC
Confidence 3589999995 441 1222210 00 011 33 4579999999999 5567664443
No 118
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.91 E-value=0.021 Score=62.64 Aligned_cols=185 Identities=8% Similarity=-0.034 Sum_probs=107.2
Q ss_pred cceEeEEEecCCcEEEEEeCCCCeEEecCcceEeeCCeeeEEeecCCCCCCCeeEEEE-c-CCC-cEEEEe---------
Q 010579 33 AGIVSNVVSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAV-S-PSG-ELLVLD--------- 100 (507)
Q Consensus 33 sG~l~~va~ag~~~I~~~d~~t~~i~aG~~~~~~~~G~~~~~~~~G~~~~~~P~gIaV-d-~dG-~LYVaD--------- 100 (507)
+|....+.+..+.+|.++|+.+.++.. . + .. ..+..|+++++ . |++ .||++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~----------i-i-~i----p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~d 163 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDA----------I-L-EI----PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVND 163 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEE----------E-E-EC----SSCCSEEEEEECCSSBCSEEEEEECSCEESSCS
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEee----------E-E-eC----CCCCCCcceeeeecCCCcEEEEecccccccCCC
Confidence 455555777777888888887766541 0 0 11 11236999998 4 665 488884
Q ss_pred --------CCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCCC--------
Q 010579 101 --------SENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN-------- 163 (507)
Q Consensus 101 --------s~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~N-------- 163 (507)
...+.|-.|+.+. .++.-.+-. + ..|.+++++++|. +|++....
T Consensus 164 g~~l~~~~~~~~~vtvID~~t---~~v~~qI~V--------g--------g~pd~~~~spdGk~~~vt~~~se~~~~i~~ 224 (595)
T 1fwx_A 164 GTNMEDVANYVNVFTAVDADK---WEVAWQVLV--------S--------GNLDNCDADYEGKWAFSTSYNSEKGMTLPE 224 (595)
T ss_dssp SSSTTCGGGEEEEEEEEETTT---TEEEEEEEE--------S--------SCCCCEEECSSSSEEEEEESCTTCCSSHHH
T ss_pred CcccccccccCceEEEEECCC---CeEEEEEEe--------C--------CCccceEECCCCCEEEEEecCcccCcchhh
Confidence 3345788888762 222211111 0 1588999999988 88888765
Q ss_pred ------CeEEEEcC--------CC-------cEEEecCcccCCCCCCCCC-ccCc-cCCCCceEEEEcCCCeEEEEeCCC
Q 010579 164 ------MAIRKISD--------TG-------VTTIAGGKWSRGVGHVDGP-SEDA-KFSNDFDVVYVGSSCSLLVIDRGN 220 (507)
Q Consensus 164 ------~rIrk~d~--------~G-------VstIaGG~~g~~~G~~dg~-~~~a-~f~~P~gIa~vd~~G~LyVaD~gn 220 (507)
..|.+++. +| |+.|-+.+. . ... .... .=..|.||.+.++...+||++.+.
T Consensus 225 ~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~-~-----~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s 298 (595)
T 1fwx_A 225 MTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE-A-----SSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS 298 (595)
T ss_dssp HTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG-G-----CCSSEEEEEEESSCCCEEECTTSSEEEEECTTS
T ss_pred ccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc-C-----CceeEEEEecCCCceEEEEcCCCCEEEEeCCCC
Confidence 33666651 12 333321110 0 000 0000 114799999765566799999999
Q ss_pred CeEEEEECCCCc------------eeeCCCCC-ccceEEEEecceeEEehhHH
Q 010579 221 QAIREIQLHDDD------------CSDNYDDT-FHLGIFVLVAAAFFGYMLAL 260 (507)
Q Consensus 221 ~rIr~I~l~~~~------------~~~~~~~G-~p~gIa~~~~a~~~gy~~~~ 260 (507)
+.|..|+..+.. .......| .|..+++...+ .+|....
T Consensus 299 ~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG--~aY~t~~ 349 (595)
T 1fwx_A 299 PTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG--NAYTSLF 349 (595)
T ss_dssp SBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS--EEEEEET
T ss_pred CeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC--eEEEEEe
Confidence 999999998642 12222223 47777776643 3454443
No 119
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.88 E-value=0.0068 Score=65.93 Aligned_cols=106 Identities=11% Similarity=-0.054 Sum_probs=75.4
Q ss_pred EcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCCCCeEEE
Q 010579 90 VSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRK 168 (507)
Q Consensus 90 Vd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~N~rIrk 168 (507)
.|+.+.+||+....+.|.+|+..+ +++...+..+ ..|.++++++||+ +||++. .+.|.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t---~~v~~~i~~g----------------~~p~~v~~SpDGr~lyv~~~-dg~V~v 222 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGST---YEIKTVLDTG----------------YAVHISRLSASGRYLFVIGR-DGKVNM 222 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTT---CCEEEEEECS----------------SCEEEEEECTTSCEEEEEET-TSEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCC---CeEEEEEeCC----------------CCccceEECCCCCEEEEEcC-CCeEEE
Confidence 445567999999999999999873 4333222211 2578999999998 899874 568999
Q ss_pred EcCC---C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEE----cCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 169 ISDT---G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV----GSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 169 ~d~~---G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~v----d~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
||.. + +.+|..| ..|.+|++. ++...|||++...+.|..|+..+...
T Consensus 223 iD~~~~t~~~v~~i~~G------------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIG------------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp EETTSSSCCEEEEEECC------------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred EECCCCCCcEeEEEecC------------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 9973 3 3344221 147888864 24558999999999999999766443
No 120
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.86 E-value=0.0057 Score=63.10 Aligned_cols=107 Identities=10% Similarity=-0.094 Sum_probs=71.7
Q ss_pred CcEEEEeCCCC----eEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC-------
Q 010579 94 GELLVLDSENS----NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT------- 161 (507)
Q Consensus 94 G~LYVaDs~n~----rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs------- 161 (507)
..+||++...+ +|.+||... +++.-.+-. | ..| +|++++||. +||+++
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t---~~v~~~i~v-----G-----------~~P-~i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGC---GVTLGHSLG-----A-----------FLS-LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTT---TEEEEEEEE-----C-----------TTC-EEEECTTSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCccceEEEEECCC---CeEEEEEeC-----C-----------CCC-ceEECCCCCEEEEEccccccccc
Confidence 47999999877 888999863 332211111 1 248 999999986 999985
Q ss_pred --CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC-CCeEEE--EECCC
Q 010579 162 --MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIRE--IQLHD 230 (507)
Q Consensus 162 --~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g-n~rIr~--I~l~~ 230 (507)
..+.|.+||... +.+|.-+... .......|.++++.++...|||++.. .+.|.. ||+.+
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~v~~~~----------~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIELPDAP----------RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSC----------SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCcc----------ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 357899999654 4555321000 00112479999976666689999976 678888 87754
No 121
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.86 E-value=0.023 Score=54.06 Aligned_cols=128 Identities=10% Similarity=0.011 Sum_probs=76.3
Q ss_pred cEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCCCCeEEEEcCC-
Q 010579 95 ELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDT- 172 (507)
Q Consensus 95 ~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~N~rIrk~d~~- 172 (507)
.++|+....+.|..++... ++.......+ + ....|.+++++++|+ +||++...+.|.++|..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~---~~~~~~~~~~--------~-----~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK---MAVDKVITIA--------D-----AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETTTEEEEEETTT---TEEEEEEECT--------T-----CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCC---CcEEEEEEcC--------C-----CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 3566666777788887652 3322211111 0 001488999999995 89999999999999953
Q ss_pred C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC-----------CCCeEEEEECCCCceeeC-CC
Q 010579 173 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-----------GNQAIREIQLHDDDCSDN-YD 238 (507)
Q Consensus 173 G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~-----------gn~rIr~I~l~~~~~~~~-~~ 238 (507)
+ +.++..+..+ ..-..|.++++.++...||+++. .++.|+.+++.+..+... ..
T Consensus 66 ~~~~~~~~~~~~~------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 133 (337)
T 1pby_B 66 GETLGRIDLSTPE------------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA 133 (337)
T ss_dssp CCEEEEEECCBTT------------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred CCeEeeEEcCCcc------------cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC
Confidence 3 3334321100 00125778886434447899863 358999999987654432 22
Q ss_pred CCccceEEEEec
Q 010579 239 DTFHLGIFVLVA 250 (507)
Q Consensus 239 ~G~p~gIa~~~~ 250 (507)
...+.++++...
T Consensus 134 ~~~~~~~~~s~d 145 (337)
T 1pby_B 134 PRQITMLAWARD 145 (337)
T ss_dssp CSSCCCEEECTT
T ss_pred CCCcceeEECCC
Confidence 334667776544
No 122
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.83 E-value=0.031 Score=59.44 Aligned_cols=140 Identities=14% Similarity=0.199 Sum_probs=79.8
Q ss_pred CeeeEEeecCCCCCCCeeEEEEcCCCc--EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcc
Q 010579 69 GYTVETVFEGSKFGMEPFSVAVSPSGE--LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK 146 (507)
Q Consensus 69 G~~~~~~~~G~~~~~~P~gIaVd~dG~--LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~ 146 (507)
|+.++.+..| +..|++|++.|||. |||++. .++|++++.++... ...+++...-.. .|. .......+.
T Consensus 3 gf~v~~va~g---L~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~--~~~~~~~~~~~~---~g~-~~~~e~Gll 72 (463)
T 2wg3_C 3 CFCIQEVVSG---LRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIF--KEPYLDIHKLVQ---SGI-KGGDERGLL 72 (463)
T ss_dssp CEEEEEEEEE---ESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBC--SSCSEECTTTBC---CCC-SSSCCCSEE
T ss_pred ceEEEEeccC---CCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCee--eeeecCCcceec---cCc-cccCCCcce
Confidence 4444444442 34899999999985 999997 58999998764211 112222211000 000 001124567
Q ss_pred eEEEcCC----CCEEEEeCCC------------CeEEEEcCC-----C-----cEEEecCcccCCCCCCCCCccCccCCC
Q 010579 147 GLAVDDR----GNIYIADTMN------------MAIRKISDT-----G-----VTTIAGGKWSRGVGHVDGPSEDAKFSN 200 (507)
Q Consensus 147 GIaVd~d----GnIYVADs~N------------~rIrk~d~~-----G-----VstIaGG~~g~~~G~~dg~~~~a~f~~ 200 (507)
|||++++ |.|||+-+.. .+|.++... . ..+|...... ..--.
T Consensus 73 gia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~------------~~~H~ 140 (463)
T 2wg3_C 73 SLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL------------HRKHL 140 (463)
T ss_dssp EEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES------------SSSSC
T ss_pred eeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC------------CCccc
Confidence 9999985 8899985421 367666521 1 2233211100 00112
Q ss_pred CceEEEEcCCCeEEEE--eCC---------------CCeEEEEECCCC
Q 010579 201 DFDVVYVGSSCSLLVI--DRG---------------NQAIREIQLHDD 231 (507)
Q Consensus 201 P~gIa~vd~~G~LyVa--D~g---------------n~rIr~I~l~~~ 231 (507)
...|+ .+++|.|||+ |.+ .++|.+|++++.
T Consensus 141 g~~l~-fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~ 187 (463)
T 2wg3_C 141 GGQLL-FGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD 187 (463)
T ss_dssp EEEEE-ECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC
T ss_pred CCcEe-ECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC
Confidence 34566 4889999998 433 468999999884
No 123
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.82 E-value=0.05 Score=56.58 Aligned_cols=151 Identities=16% Similarity=0.246 Sum_probs=93.9
Q ss_pred eEeEEEecCCcEEEEEeCCCCeEEe--cCcceEeeCCeeeEEeecCCCC--CCCeeEEEEcCC----C-cEEEEeCCCCe
Q 010579 35 IVSNVVSALVKWLWSLKDSPKTAVS--SSSMIKFEGGYTVETVFEGSKF--GMEPFSVAVSPS----G-ELLVLDSENSN 105 (507)
Q Consensus 35 ~l~~va~ag~~~I~~~d~~t~~i~a--G~~~~~~~~G~~~~~~~~G~~~--~~~P~gIaVd~d----G-~LYVaDs~n~r 105 (507)
....+++++...|.++|..+++... ...+ ..+... ....+|... ...-.||+++++ + .||+.-..+.+
T Consensus 171 ~~aYItD~~~~gLIVydl~~~~swRv~~~~~-~pd~~~--~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 171 TFVYITNFLRGALFIYDHKKQDSWNVTHPTF-KAERPT--KFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEECGGG-SCCSCE--EEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred cEEEEEcCCCCcEEEEECCCCcEEEEccCCC-ccccCc--ceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 3344888888899999998887441 1111 111111 111222111 124568999886 3 59999998889
Q ss_pred EEEEeCC----CCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEc-CCCCEEEEeCCCCeEEEEcCCC-------
Q 010579 106 IYKISTS----LSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD-DRGNIYIADTMNMAIRKISDTG------- 173 (507)
Q Consensus 106 I~ki~~~----g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd-~dGnIYVADs~N~rIrk~d~~G------- 173 (507)
++++... .+....+..+ |. .| ......++++| .+|+||+++..+++|.+.++++
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~-G~----kg---------~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n 313 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELL-GN----RG---------KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKN 313 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEE-EE----CC---------TTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGG
T ss_pred EEEEEHHHhhCcchhhceEEe-ee----cC---------CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCc
Confidence 9999732 1111112211 11 00 01233478897 7899999999999999999765
Q ss_pred cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC
Q 010579 174 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR 218 (507)
Q Consensus 174 VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~ 218 (507)
+.+++- +..|..|.++. ++.+|.|||...
T Consensus 314 ~~~l~~---------------d~~l~~pd~~~-i~~~g~Lwv~sn 342 (381)
T 3q6k_A 314 TDVVYT---------------SSRFVFGTDIS-VDSKGGLWFMSN 342 (381)
T ss_dssp EEEEEE---------------CTTCCSEEEEE-ECTTSCEEEEEC
T ss_pred eEEEEE---------------CCCccccCeEE-ECCCCeEEEEEC
Confidence 355542 22688999998 688999999874
No 124
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.81 E-value=0.013 Score=64.47 Aligned_cols=122 Identities=21% Similarity=0.254 Sum_probs=76.0
Q ss_pred CCCCCeeEEEEcC-CCcEEEEeCCC---------------------CeEEEEeCCCCCCC----c--cEEEecCCCCcc-
Q 010579 80 KFGMEPFSVAVSP-SGELLVLDSEN---------------------SNIYKISTSLSPYS----R--PKLVAGSPEGYY- 130 (507)
Q Consensus 80 ~~~~~P~gIaVd~-dG~LYVaDs~n---------------------~rI~ki~~~g~~~g----~--i~~vaG~~~G~~- 130 (507)
..+..|.+|++++ +|.|||+-+.+ ++|+++........ + +.+++|.+....
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 3457999999998 89999997753 57999976432111 1 223444332111
Q ss_pred ---ccCCCCcccccCCCcceEEEcCCCCEEEE-eC-----------CCCeEEEEcCC-C-cEEEecCcccCCCCCCCCCc
Q 010579 131 ---GHVDGRPRGARMNHPKGLAVDDRGNIYIA-DT-----------MNMAIRKISDT-G-VTTIAGGKWSRGVGHVDGPS 193 (507)
Q Consensus 131 ---G~~dG~~~~a~fn~P~GIaVd~dGnIYVA-Ds-----------~N~rIrk~d~~-G-VstIaGG~~g~~~G~~dg~~ 193 (507)
+..........|+.|-+|+||++|+|||+ |. +|+.+..++.. | +..++-+..+
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---------- 530 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---------- 530 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----------
T ss_pred cccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----------
Confidence 11111123456999999999999999997 43 35677888743 4 6766543221
Q ss_pred cCccCCCCceEEEEcCCCeEEEE
Q 010579 194 EDAKFSNDFDVVYVGSSCSLLVI 216 (507)
Q Consensus 194 ~~a~f~~P~gIa~vd~~G~LyVa 216 (507)
....|+++.++...|||.
T Consensus 531 -----aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 -----CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp -----CEEEEEEECTTSSEEEEE
T ss_pred -----ccCcCeeECCCCCEEEEE
Confidence 134577876666677775
No 125
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.48 E-value=0.14 Score=52.78 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=79.8
Q ss_pred cEEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEE--cCC-CC--EEEEeCCCCeEE
Q 010579 95 ELLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAV--DDR-GN--IYIADTMNMAIR 167 (507)
Q Consensus 95 ~LYVaDs~--n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaV--d~d-Gn--IYVADs~N~rIr 167 (507)
.+|+++.. +++|..|+.+.. .+.+..+.... - .....+..|.|||+ +++ |. +||.+.. .++.
T Consensus 88 la~as~R~~~~n~l~vf~iDp~-~~~l~~i~~~~-~--------pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~ 156 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGK-NGTLQSMTDPD-H--------PIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFE 156 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTT-TCCEEECSCTT-S--------CEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEE
T ss_pred EEEEeCCCCCCCeEEEEEECCC-CCceeeccccc-c--------CcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEE
Confidence 36899998 899988854311 13333321110 0 00123678999999 774 53 7888775 5666
Q ss_pred EEc----CCC-c-----EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc-----
Q 010579 168 KIS----DTG-V-----TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD----- 232 (507)
Q Consensus 168 k~d----~~G-V-----stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~----- 232 (507)
.+. .+| + .++.-+ ..|-++++.+..+.|||++...+ ||+|+.+...
T Consensus 157 q~~l~~~~~g~~~~~lVR~f~lg------------------sq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~ 217 (355)
T 3amr_A 157 QYELKADKNGYISGKKVRAFKMN------------------SQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGT 217 (355)
T ss_dssp EEEEEECTTSCEEEEEEEEEECS------------------SCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCE
T ss_pred EEEEEeCCCCcccceEEEEecCC------------------CCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCce
Confidence 533 233 2 222110 15678887778899999999855 9999965322
Q ss_pred eee-CCCCC---ccceEEEEecceeEEehhHHHhcc
Q 010579 233 CSD-NYDDT---FHLGIFVLVAAAFFGYMLALLQRR 264 (507)
Q Consensus 233 ~~~-~~~~G---~p~gIa~~~~a~~~gy~~~~lq~~ 264 (507)
... ....+ -+.||++..+..--||.++.-|..
T Consensus 218 ~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 218 VIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp EEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred EEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 111 22222 357888764432234545544443
No 126
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.46 E-value=0.092 Score=52.41 Aligned_cols=105 Identities=10% Similarity=0.117 Sum_probs=68.0
Q ss_pred EEcCC-CcEEEEe---CCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCC-CEEEEeCCC
Q 010579 89 AVSPS-GELLVLD---SENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NIYIADTMN 163 (507)
Q Consensus 89 aVd~d-G~LYVaD---s~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG-nIYVADs~N 163 (507)
++.++ +.||++| ..+..|++++.+|+. ...+.... . ++++++| .||.+|.+.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~---~~~lt~~~---------------~-----~~~~~~g~~iy~t~~g~ 166 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE---KKKIKNHY---------------L-----FTCNTSDRYFYYNNPKN 166 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC---CEEEESSC---------------C-----CCSEEETTEEEEECTTT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC---eEEEeCCC---------------c-----eEeeEECCEEEEEeCCC
Confidence 34443 4699999 678899999998532 23333211 0 2234444 599999988
Q ss_pred CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCC-CeEEEEECCCCceeeC
Q 010579 164 MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSDN 236 (507)
Q Consensus 164 ~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn-~rIr~I~l~~~~~~~~ 236 (507)
.+|.+++.+| ..++..+ +..+++.+..+.||.+|..+ .+|.++++++......
T Consensus 167 ~~Iy~~~l~g~~~~~l~~~--------------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L 222 (302)
T 3s25_A 167 GQLYRYDTASQSEALFYDC--------------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL 222 (302)
T ss_dssp CCEEEEETTTTEEEEEECS--------------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC
T ss_pred ceEEEEECCCCCEEEEeCC--------------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE
Confidence 8999999776 4444211 11122345788999998754 6999999998765543
No 127
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.39 E-value=0.0072 Score=66.11 Aligned_cols=62 Identities=11% Similarity=0.220 Sum_probs=49.8
Q ss_pred CCCCeeEEEEcCCCcEEE-EeCC-----------CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceE
Q 010579 81 FGMEPFSVAVSPSGELLV-LDSE-----------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGL 148 (507)
Q Consensus 81 ~~~~P~gIaVd~dG~LYV-aDs~-----------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GI 148 (507)
.+++|.+|+||++|+||| +|.. ++.|+++++. .|++..++..+ .+..|+||
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~---tGel~~fl~~P--------------~~aEpnGi 536 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA---TGEIRRFMVGP--------------IGCEVTGI 536 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT---TCCEEEEEECC--------------TTCEEEEE
T ss_pred ccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC---CCeEEEEEeCC--------------CCccccCC
Confidence 468999999999999999 8863 5689999886 46777776432 13578999
Q ss_pred EEcCCCC-EEEE
Q 010579 149 AVDDRGN-IYIA 159 (507)
Q Consensus 149 aVd~dGn-IYVA 159 (507)
++++|+. |||+
T Consensus 537 afSPD~ktLfV~ 548 (592)
T 4a9v_A 537 SFSPDQKTLFVG 548 (592)
T ss_dssp EECTTSSEEEEE
T ss_pred EECCCCCEEEEE
Confidence 9999987 8887
No 128
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.35 E-value=0.074 Score=56.66 Aligned_cols=136 Identities=10% Similarity=0.027 Sum_probs=77.2
Q ss_pred CeeEEEE--cCCCc-EEEEeC-----CCCeEEEEeCCCCCCCccEEE--ecCCCCccccCCCCcc------cccCCCcce
Q 010579 84 EPFSVAV--SPSGE-LLVLDS-----ENSNIYKISTSLSPYSRPKLV--AGSPEGYYGHVDGRPR------GARMNHPKG 147 (507)
Q Consensus 84 ~P~gIaV--d~dG~-LYVaDs-----~n~rI~ki~~~g~~~g~i~~v--aG~~~G~~G~~dG~~~------~a~fn~P~G 147 (507)
.|..|.+ +|+|. +||+.. .++.|.++..+. |..... +...... ..+... .+.-+.|.+
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~---g~~~~~~vIdi~~~~---v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED---GKWNAEKVIEIPAEP---LEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET---TEEEEEEEEEECCEE---CCSSCCGGGGGGTEECCCCCC
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC---CceeEEEEEeCCCcc---ccccccccccccccCCCceeE
Confidence 5888877 88885 888887 778887766542 222111 1011000 000000 000257999
Q ss_pred EEEcCCCC-EEEEeCCCCeEEEEcC--CC-c---EEEe-cCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEe--
Q 010579 148 LAVDDRGN-IYIADTMNMAIRKISD--TG-V---TTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID-- 217 (507)
Q Consensus 148 IaVd~dGn-IYVADs~N~rIrk~d~--~G-V---stIa-GG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD-- 217 (507)
|.+++||+ |||++.+.+.|.+|+- .+ . ..+. ||... ..+-+.....-..|.++++..+...|||++
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~----~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl 401 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFH----RADHPAGHKLTGAPQMLEISRDGRRVYVTNSL 401 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTT----CBCCTTSCCCCSCCCCEEECTTSSEEEEECCC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeec----cccccccccCCCCCCEEEEcCCCCEEEEEcCC
Confidence 99999998 9999999999999983 22 2 2222 22110 001110111123699999765666899999
Q ss_pred ------C-----CCCeEEEEECC
Q 010579 218 ------R-----GNQAIREIQLH 229 (507)
Q Consensus 218 ------~-----gn~rIr~I~l~ 229 (507)
. .+..+.+++.+
T Consensus 402 ~~~wd~Qfyp~~~~~~~~~~~vd 424 (462)
T 2ece_A 402 YSTWDNQFYPEGLKGWMVKLNAN 424 (462)
T ss_dssp CHHHHHHHSTTCCCCEEEEEEEC
T ss_pred cccccccccCCCCceEEEEEEec
Confidence 2 45666666543
No 129
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.31 E-value=0.026 Score=60.05 Aligned_cols=119 Identities=17% Similarity=0.174 Sum_probs=68.1
Q ss_pred CeeEEEEcCC----CcEEEEeCCC------------CeEEEEeCCCCC-----CCccEEEecCCCCccccCCCCcccccC
Q 010579 84 EPFSVAVSPS----GELLVLDSEN------------SNIYKISTSLSP-----YSRPKLVAGSPEGYYGHVDGRPRGARM 142 (507)
Q Consensus 84 ~P~gIaVd~d----G~LYVaDs~n------------~rI~ki~~~g~~-----~g~i~~vaG~~~G~~G~~dG~~~~a~f 142 (507)
.+.+|+++|+ |.|||+-+.. .+|.++...... .....++....... .-
T Consensus 70 Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~-----------~~ 138 (463)
T 2wg3_C 70 GLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH-----------RK 138 (463)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS-----------SS
T ss_pred cceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC-----------Cc
Confidence 4679999995 8899986521 488888765211 01223333211000 11
Q ss_pred CCcceEEEcCCCCEEEE--eCC---------------CCeEEEEcCCCcE-----EEecCcccCCCCCCCC-----CccC
Q 010579 143 NHPKGLAVDDRGNIYIA--DTM---------------NMAIRKISDTGVT-----TIAGGKWSRGVGHVDG-----PSED 195 (507)
Q Consensus 143 n~P~GIaVd~dGnIYVA--Ds~---------------N~rIrk~d~~GVs-----tIaGG~~g~~~G~~dg-----~~~~ 195 (507)
..-..|++++||.|||+ |.. ...|.+|+.+|-. .|.-+. .+.+. ..-.
T Consensus 139 H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dN-----Pf~~~~~~~~eI~a 213 (463)
T 2wg3_C 139 HLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSN-----PHFNSTNQPPEVFA 213 (463)
T ss_dssp SCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTS-----TTTTCSSSCTTEEE
T ss_pred ccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCC-----CCcCCCCCcccEEE
Confidence 23458999999999998 433 2468888877621 121110 01111 0112
Q ss_pred ccCCCCceEEEEcCC----C--eEEEEeC
Q 010579 196 AKFSNDFDVVYVGSS----C--SLLVIDR 218 (507)
Q Consensus 196 a~f~~P~gIa~vd~~----G--~LyVaD~ 218 (507)
..+.+|+++++.+.+ | .||++|.
T Consensus 214 ~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 214 HGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp ECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred ECCCCcceEEECCCCCCcccceEEEeccc
Confidence 247899999976554 4 5778886
No 130
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.18 E-value=0.13 Score=53.10 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=52.8
Q ss_pred CCeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCC--CCCccEEEecCCCCccccCCCCcccccCC-CcceEEEc--CC--C
Q 010579 83 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLS--PYSRPKLVAGSPEGYYGHVDGRPRGARMN-HPKGLAVD--DR--G 154 (507)
Q Consensus 83 ~~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~--~~g~i~~vaG~~~G~~G~~dG~~~~a~fn-~P~GIaVd--~d--G 154 (507)
..|.++++|+ .|.|||++-.. .|++|+.... ..+++...++.+ .|. .+.||++. ++ |
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~g--------------~l~aDvEGLai~~~~~g~g 244 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGR--------------HLTRDIEGLTIYYAADGKG 244 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSSS--------------SBCSCEEEEEEEECGGGCE
T ss_pred CCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecCC--------------ccccCcceEEEEecCCCCE
Confidence 4799999997 68999999874 5999995421 112222222211 133 79999995 33 4
Q ss_pred CEEEEeCCCCeEEEEcCC
Q 010579 155 NIYIADTMNMAIRKISDT 172 (507)
Q Consensus 155 nIYVADs~N~rIrk~d~~ 172 (507)
.|+|++-+++...+|+..
T Consensus 245 yLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 245 YLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEEGGGTEEEEEESS
T ss_pred EEEEEcCCCCEEEEEECC
Confidence 599999999999999975
No 131
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.12 E-value=0.22 Score=53.01 Aligned_cols=129 Identities=12% Similarity=-0.057 Sum_probs=76.0
Q ss_pred CeeEEEEcCCCcE-EEEeC------------------CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCC
Q 010579 84 EPFSVAVSPSGEL-LVLDS------------------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNH 144 (507)
Q Consensus 84 ~P~gIaVd~dG~L-YVaDs------------------~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~ 144 (507)
.++++.+.|++++ |+++. ..++|..++... +++.-.+-. +..| ..
T Consensus 189 ~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~---~k~~~tI~v--g~~g-----------~~ 252 (462)
T 2ece_A 189 LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK---RKRIHSLTL--GEEN-----------RM 252 (462)
T ss_dssp CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT---TEEEEEEES--CTTE-----------EE
T ss_pred ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC---CcEeeEEec--CCCC-----------Cc
Confidence 5778999998874 55542 379999999873 322211111 1111 25
Q ss_pred cceEEE--cCCCC-EEEEeC-----CCCeEEEEc-CCC----cEEEecCcccCCCCCCC-CCc-cCccCCCCceEEEEcC
Q 010579 145 PKGLAV--DDRGN-IYIADT-----MNMAIRKIS-DTG----VTTIAGGKWSRGVGHVD-GPS-EDAKFSNDFDVVYVGS 209 (507)
Q Consensus 145 P~GIaV--d~dGn-IYVADs-----~N~rIrk~d-~~G----VstIaGG~~g~~~G~~d-g~~-~~a~f~~P~gIa~vd~ 209 (507)
|.+|.+ +++|. +||+.. .++.|.++. ++| +.+|--..... .+... -+. ..+.-..|.+|.+..+
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v-~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL-EGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC-CSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc-cccccccccccccCCCceeEEEECCC
Confidence 788877 89987 999887 777777655 224 12221000000 00000 000 0001246899997666
Q ss_pred CCeEEEEeCCCCeEEEEECC
Q 010579 210 SCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 210 ~G~LyVaD~gn~rIr~I~l~ 229 (507)
+..|||++++.+.|+.++..
T Consensus 332 GrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp SCEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEeCCCCEEEEEEec
Confidence 67899999999999999975
No 132
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.00 E-value=0.11 Score=49.65 Aligned_cols=67 Identities=16% Similarity=0.245 Sum_probs=43.1
Q ss_pred CcceEEEcCCCCEEEEeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCC
Q 010579 144 HPKGLAVDDRGNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 221 (507)
Q Consensus 144 ~P~GIaVd~dGnIYVADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~ 221 (507)
....+++|++|+|||+.. ++.|.+++.+| +..+.... ..+..++ ++.++.|||+.. ++
T Consensus 216 ~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~-----------------~~~~~~~-~~~~g~l~v~t~-~g 275 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTGK-----------------RIESSPV-IGNTDTIYFGSY-DG 275 (330)
T ss_dssp CCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECSS-----------------CCCSCCE-ECTTSCEEEECT-TC
T ss_pred ceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCCC-----------------Cccccce-EcCCCeEEEecC-CC
Confidence 456889999999999975 56788888777 22221110 0112334 467788888765 35
Q ss_pred eEEEEECCC
Q 010579 222 AIREIQLHD 230 (507)
Q Consensus 222 rIr~I~l~~ 230 (507)
.|.+++.++
T Consensus 276 gl~~~d~~g 284 (330)
T 3hxj_A 276 HLYAINPDG 284 (330)
T ss_dssp EEEEECTTS
T ss_pred CEEEECCCC
Confidence 788887643
No 133
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.93 E-value=0.0089 Score=65.63 Aligned_cols=74 Identities=23% Similarity=0.345 Sum_probs=55.7
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCC---CCc----cEEEecCCCCccccCCCCcccccCCCcceEEEcCCC
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSP---YSR----PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 154 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~---~g~----i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG 154 (507)
.+|+++.++|||. +||++...++|.+|+..... .+. -.+++ .. ..| ..|.++++|++|
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~v--~vG-----------~gP~h~aF~~dG 342 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-EP--ELG-----------LGPLHTAFDGRG 342 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-CC--BCC-----------SCEEEEEECTTS
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-Ec--CCC-----------CCcceEEECCCC
Confidence 5899999999997 99999999999999975110 000 00111 10 011 369999999999
Q ss_pred CEEEEeCCCCeEEEEc
Q 010579 155 NIYIADTMNMAIRKIS 170 (507)
Q Consensus 155 nIYVADs~N~rIrk~d 170 (507)
++|++-...+.|.+++
T Consensus 343 ~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 343 NAYTSLFLDSQVVKWN 358 (595)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred eEEEEEecCCcEEEEE
Confidence 9999999999999999
No 134
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.84 E-value=0.17 Score=50.46 Aligned_cols=105 Identities=9% Similarity=0.066 Sum_probs=66.6
Q ss_pred eeEEEEcCCCcEEEEeCC-------------CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEc
Q 010579 85 PFSVAVSPSGELLVLDSE-------------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 151 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~-------------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd 151 (507)
+..|.++. +.||.++.. .+.|++++.+++. ...+... .+.++.
T Consensus 57 ~~~i~~~g-~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~---~~~l~~~--------------------~~~~~s 112 (302)
T 3s25_A 57 AMYINADK-NYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG---STVLDPD--------------------PCIYAS 112 (302)
T ss_dssp EEEEEECS-SEEEEEEECC------CCSSCCSEEEEEEETTSCC---CEEEECS--------------------CEEEEE
T ss_pred eeeEEEcC-CEEEEEECCCCcccccceeccCCCeEEEEeCCCCc---ceEeecC--------------------CccEEE
Confidence 45666553 468877654 3689999998532 2222211 122344
Q ss_pred CCC-CEEEEe---CCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEE
Q 010579 152 DRG-NIYIAD---TMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIRE 225 (507)
Q Consensus 152 ~dG-nIYVAD---s~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~ 225 (507)
++| .||++| .++..|.+++.+| ...|.... + .|. ....+.||.+|.+...|.+
T Consensus 113 ~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~--------------~---~~~----~~~g~~iy~t~~g~~~Iy~ 171 (302)
T 3s25_A 113 LIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY--------------L---FTC----NTSDRYFYYNNPKNGQLYR 171 (302)
T ss_dssp EETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC--------------C---CCS----EEETTEEEEECTTTCCEEE
T ss_pred EeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC--------------c---eEe----eEECCEEEEEeCCCceEEE
Confidence 444 599999 6788999999877 55553210 0 122 2345689999988899999
Q ss_pred EECCCCcee
Q 010579 226 IQLHDDDCS 234 (507)
Q Consensus 226 I~l~~~~~~ 234 (507)
+++++....
T Consensus 172 ~~l~g~~~~ 180 (302)
T 3s25_A 172 YDTASQSEA 180 (302)
T ss_dssp EETTTTEEE
T ss_pred EECCCCCEE
Confidence 998876543
No 135
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.80 E-value=0.17 Score=48.39 Aligned_cols=106 Identities=13% Similarity=0.168 Sum_probs=59.5
Q ss_pred EEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeE
Q 010579 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAI 166 (507)
Q Consensus 87 gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rI 166 (507)
.++++++|.|||+. .++.|+.++.. +........ .-.....+++|.+|+|||+. +.|
T Consensus 141 ~~~~~~~g~l~vgt-~~~~l~~~d~~----g~~~~~~~~---------------~~~~~~~~~~d~~g~l~v~t---~~l 197 (330)
T 3hxj_A 141 TPIVSEDGTIYVGS-NDNYLYAINPD----GTEKWRFKT---------------NDAITSAASIGKDGTIYFGS---DKV 197 (330)
T ss_dssp CCEECTTSCEEEEC-TTSEEEEECTT----SCEEEEEEC---------------SSCCCSCCEECTTCCEEEES---SSE
T ss_pred eeEEcCCCEEEEEc-CCCEEEEECCC----CCEeEEEec---------------CCCceeeeEEcCCCEEEEEe---CEE
Confidence 44566666676654 23566666654 221111100 01234467889999999998 679
Q ss_pred EEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 167 RKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 167 rk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
.+++.+|.....-.. . -.....++ .+.+|.|||+.. ++.|.+++..+..
T Consensus 198 ~~~d~~g~~~~~~~~----~-----------~~~~~~~~-~~~~g~l~v~t~-~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 198 YAINPDGTEKWNFYA----G-----------YWTVTRPA-ISEDGTIYVTSL-DGHLYAINPDGTE 246 (330)
T ss_dssp EEECTTSCEEEEECC----S-----------SCCCSCCE-ECTTSCEEEEET-TTEEEEECTTSCE
T ss_pred EEECCCCcEEEEEcc----C-----------CcceeceE-ECCCCeEEEEcC-CCeEEEECCCCCE
Confidence 999977622211000 0 01234455 477788888875 4567777655443
No 136
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.62 E-value=0.64 Score=48.27 Aligned_cols=147 Identities=9% Similarity=0.056 Sum_probs=89.4
Q ss_pred CCeeEEEEc-C-------CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcc---c--cCCCCcccccCCCcceEE
Q 010579 83 MEPFSVAVS-P-------SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYY---G--HVDGRPRGARMNHPKGLA 149 (507)
Q Consensus 83 ~~P~gIaVd-~-------dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~---G--~~dG~~~~a~fn~P~GIa 149 (507)
..-.+|+|| - ++.+||+|.....|.+++... ++...+.... -.+ + ..+|..- .....-.|||
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~---~~swRv~~~~-~~pd~~~~~~i~G~~~-~~~~Gi~gIa 226 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKK---QDSWNVTHPT-FKAERPTKFDYGGKEY-EFKAGIFGIT 226 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTT---TEEEEEECGG-GSCCSCEEEEETTEEE-EECCCEEEEE
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCC---CcEEEEccCC-CccccCcceEECCEEe-EeccCceEEE
Confidence 356789999 2 457999999999999999873 4443333210 000 0 0112100 0124667999
Q ss_pred EcCC----C-CEEEEeCCCCeEEEEcC----CC-----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEE
Q 010579 150 VDDR----G-NIYIADTMNMAIRKISD----TG-----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 215 (507)
Q Consensus 150 Vd~d----G-nIYVADs~N~rIrk~d~----~G-----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyV 215 (507)
++++ + .||+.--...++..+.+ +. |..+ |.+ | + .....++++++.+|.||+
T Consensus 227 Lsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~k-g--------~-----~s~~~~~~~D~~~G~ly~ 291 (381)
T 3q6k_A 227 LGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNR-G--------K-----YNDAIALAYDPKTKVIFF 291 (381)
T ss_dssp ECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EEC-C--------T-----TCCEEEEEECTTTCEEEE
T ss_pred ecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eec-C--------C-----CCCcceEEEeCCCCeEEE
Confidence 9986 4 49999988888998872 11 2222 111 0 0 011123443248999999
Q ss_pred EeCCCCeEEEEECCC-Cc-------eeeCCCCCccceEEEEe
Q 010579 216 IDRGNQAIREIQLHD-DD-------CSDNYDDTFHLGIFVLV 249 (507)
Q Consensus 216 aD~gn~rIr~I~l~~-~~-------~~~~~~~G~p~gIa~~~ 249 (507)
++...+.|.+++.++ .. .......-+|.++++..
T Consensus 292 ~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~ 333 (381)
T 3q6k_A 292 AEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS 333 (381)
T ss_dssp EESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT
T ss_pred EeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC
Confidence 999999999999987 21 12223344788888753
No 137
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.50 E-value=0.58 Score=45.63 Aligned_cols=115 Identities=14% Similarity=0.198 Sum_probs=76.7
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
....++++|+|.++++-...+.|+.++... ++.. .+-+. -.....|+++++|.++++=+.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~---~~~~~~~~~h----------------~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHTLEGH----------------AMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECCC----------------SSCCCEEEECTTSCEEEEECT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCC---CcEEEEEccc----------------CCceeEEEEcCCCCEEEEEcC
Confidence 456889999999888878888999998762 3322 22111 113468999999998888777
Q ss_pred CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee
Q 010579 163 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 235 (507)
Q Consensus 163 N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~ 235 (507)
.+.|+.+|... +.++.+-. .....+++ .+++.++++-...+.|+..++....|..
T Consensus 227 dg~i~iwd~~~~~~~~~~~~h~-----------------~~v~~~~~-sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 227 DGYIKIYDVQHANLAGTLSGHA-----------------SWVLNVAF-CPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----------------SCEEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCeEEEEECCCcceeEEEcCCC-----------------CceEEEEE-CCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 88899998443 33442210 12345664 5566666666677888888887776654
No 138
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.30 E-value=0.32 Score=47.32 Aligned_cols=111 Identities=20% Similarity=0.195 Sum_probs=68.3
Q ss_pred EEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc---EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRP---KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 87 gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i---~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
.|.+|++|.||++ .+++|+|+++..+..... .+.+|.. + ...=.-|+++++|+||.++ +
T Consensus 92 a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~-g-------------w~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 92 FLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSG-G-------------WSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp EEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECS-S-------------GGGEEEEEECTTSCEEEEE--T
T ss_pred EEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccC-C-------------CCceEEEEECCCceEEEEe--C
Confidence 7899999999999 348999999853221111 1222221 1 1222689999999999999 5
Q ss_pred CeEEEEc-CCC-------cEEEec-CcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 164 MAIRKIS-DTG-------VTTIAG-GKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 164 ~rIrk~d-~~G-------VstIaG-G~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
.++.+-. +.+ -.++.| +.+. . .+ -++ .+.++.||.++ +++|.+...+...|.
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~-------------~--yr-~l~-f~~~G~l~~v~--~g~~Y~~~~p~~~~~ 214 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWD-------------T--FK-FLF-FSSVGTLFGVQ--GGKFYEDYPPSYAYD 214 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGG-------------G--EE-EEE-ECTTSCEEEEE--TTEEEEESCCCSTTC
T ss_pred CcEEecCCCCCCCcccccccceeccCCcc-------------e--EE-EEE-ECCCCcEEEEe--CCeEEecCCccccCc
Confidence 5565533 321 122222 1110 0 11 133 68999999999 789999977655443
No 139
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.24 E-value=0.43 Score=49.41 Aligned_cols=110 Identities=13% Similarity=0.230 Sum_probs=69.2
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
.-.+|+++||+.++++-..++.|+.++.++ ..+..+.+. -.....++++++|.++++=..+
T Consensus 428 ~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~---~~~~~~~~~----------------~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 428 SVWGVAFSPDDQTIASASDDKTVKLWNRNG---QLLQTLTGH----------------SSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTS---CEEEEEECC----------------SSCEEEEEECTTSCEEEEEETT
T ss_pred CeEEEEECCCCCEEEEEcCCCEEEEEECCC---CEEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCC
Confidence 456788999888888777788898888752 223333322 1235689999999988877778
Q ss_pred CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 164 MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 164 ~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
..|+.++.+| +.++.+-. .....|++ .+++.++++-...+.|+.++..+
T Consensus 489 ~~i~iw~~~~~~~~~~~~h~-----------------~~v~~l~~-s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 489 KTVKLWNRNGQLLQTLTGHS-----------------SSVRGVAF-SPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SEEEEEETTSCEEEEEECCS-----------------SCEEEEEE-CTTSSCEEEEETTSEEEEECTTS
T ss_pred CEEEEEcCCCCEEEEEeCCC-----------------CCEEEEEE-cCCCCEEEEEECcCEEEEEeCCC
Confidence 8899999777 44443211 12234553 44455444444455666666543
No 140
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.19 E-value=1.7 Score=44.07 Aligned_cols=116 Identities=15% Similarity=0.125 Sum_probs=65.9
Q ss_pred CeeEEEEcCCCc-EEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEE
Q 010579 84 EPFSVAVSPSGE-LLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 159 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~--n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVA 159 (507)
....++++|||. |+++... +.+|+.++..+ +....+.+.. .....+++++||+ |+++
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---~~~~~l~~~~----------------~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---GQIRQVTDGR----------------SNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEECCCCS----------------SCEEEEEECTTSSEEEEE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCC---CCEEeCcCCC----------------CcccceEECCCCCEEEEE
Confidence 467899999998 5545433 45799999863 3443332211 1345789999998 5554
Q ss_pred eC--CCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC--CCeEEEEECCCCce
Q 010579 160 DT--MNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG--NQAIREIQLHDDDC 233 (507)
Q Consensus 160 Ds--~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g--n~rIr~I~l~~~~~ 233 (507)
.. +..+|+.++.++ +..+.... .....+++.++...|+++... ...|+.+++.+..+
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQRITWEG-----------------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEECCCSS-----------------SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ECCCCCcEEEEEECCCCCEEEEecCC-----------------CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 42 334788888544 33332110 012344543333345554433 35788888777665
Q ss_pred ee
Q 010579 234 SD 235 (507)
Q Consensus 234 ~~ 235 (507)
..
T Consensus 348 ~~ 349 (415)
T 2hqs_A 348 QV 349 (415)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.03 E-value=2 Score=39.09 Aligned_cols=73 Identities=25% Similarity=0.322 Sum_probs=44.9
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEE-EEeC-
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY-IADT- 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIY-VADs- 161 (507)
....++++|+|..+++.. .+.|++++..+. +....+.... .-..+..++++++|..+ ++..
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~--~~~~~~~~~~--------------~~~~~~~~~~spdg~~l~~~~~~ 105 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD--PSPEKVDTGF--------------ATICNNDHGISPDGALYAISDKV 105 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSC--CSCEECCCTT--------------CCCBCSCCEECTTSSEEEEEECT
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCC--CCceEecccc--------------ccccccceEECCCCCEEEEEEeC
Confidence 466899999998666654 679999998630 2232222110 01235678999999844 4432
Q ss_pred --CCCeEEEEcCCC
Q 010579 162 --MNMAIRKISDTG 173 (507)
Q Consensus 162 --~N~rIrk~d~~G 173 (507)
...+|..++..+
T Consensus 106 ~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 106 EFGKSAIYLLPSTG 119 (297)
T ss_dssp TTSSCEEEEEETTC
T ss_pred CCCcceEEEEECCC
Confidence 356788887543
No 142
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.98 E-value=2.4 Score=39.71 Aligned_cols=115 Identities=7% Similarity=-0.038 Sum_probs=74.9
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.....++++++|.++++-...+.|+.++... ++....... -.....++++++|+++++-..
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~---~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDNTVRSWDLRE---GRQLQQHDF----------------TSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEECCC---CceEeeecC----------------CCceEEEEECCCCCEEEEEcC
Confidence 3577889999988777777788999998762 322222111 124568999999997777777
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
++.|+.++... ...+.+. -.....+++ .+++.++++-..++.|+.+++....+.
T Consensus 245 ~~~i~~~~~~~~~~~~~~~~-----------------~~~v~~~~~-~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKYQLHLH-----------------ESCVLSLKF-AYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp TSCEEEEETTSSCEEEECCC-----------------SSCEEEEEE-CTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCcEEEEECCCCCeEEEcCC-----------------ccceeEEEE-CCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 88899999544 3333110 113445664 556666666666788888887765544
No 143
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.94 E-value=2.9 Score=40.54 Aligned_cols=115 Identities=12% Similarity=0.119 Sum_probs=76.7
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..+++.++|.++++-...+.|+.++... +.. .++.+. -.....|+++++|+++++=+.
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~---~~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVRE---GMCRQTFTGH----------------ESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---CSEEEEECCC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCC---CeeEEEEcCC----------------cCCEEEEEEcCCCCEEEEEcC
Confidence 467899999999999988889999999762 322 222221 124568999999998888888
Q ss_pred CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 163 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 163 N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.+.|+.+|... +.++.... .......+++ .+++.++++-..++.|+.++.....+
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~---------------~~~~v~~~~~-s~~g~~l~~g~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDN---------------IICGITSVSF-SKSGRLLLAGYDDFNCNVWDALKADR 304 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTT---------------CCSCEEEEEE-CTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCcEEEEECCCCcEEEEEccCC---------------cccceEEEEE-CCCCCEEEEECCCCeEEEEEcccCcE
Confidence 88999999543 22321100 0112345554 56777777777778888888765544
No 144
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.91 E-value=4 Score=41.99 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=53.5
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
...+|+++++|.++++-...+.|+.++.++ ..+..+.+.. ....+|++++++.++++-..+
T Consensus 387 ~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~~~~~~----------------~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 387 SVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHS----------------SSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTC---CEEEEEECCS----------------SCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCC---CEEEEecCCC----------------CCeEEEEECCCCCEEEEEcCC
Confidence 567899999998877777778999998752 2233333221 134579999999988777778
Q ss_pred CeEEEEcCCC--cEEE
Q 010579 164 MAIRKISDTG--VTTI 177 (507)
Q Consensus 164 ~rIrk~d~~G--VstI 177 (507)
+.|+.++.++ +.++
T Consensus 448 ~~v~~w~~~~~~~~~~ 463 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTL 463 (577)
T ss_dssp SEEEEEETTSCEEEEE
T ss_pred CEEEEEECCCCEEEEE
Confidence 8899998766 4444
No 145
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.69 E-value=2.1 Score=42.39 Aligned_cols=116 Identities=11% Similarity=0.085 Sum_probs=74.2
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 162 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~ 162 (507)
-..|+++++|.++++-+..+.|+.++... ++. .++.|. -.....+++.++|. ++++=+.
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~---~~~~~~~~~h----------------~~~V~~~~~~~~~~~~l~s~s~ 190 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQ---QVVLSSYRAH----------------AAQVTCVAASPHKDSVFLSCSE 190 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECCC----------------SSCEEEEEECSSCTTEEEEEET
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCC---CcEEEEEcCc----------------CCceEEEEecCCCCCceeeecc
Confidence 46899999999988888889999999862 333 222221 12345788988874 7777777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
.+.|+.+|.. + +.++.... .-.....+++.+.++.++++-..++.|+.+++....|.
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSA---------------PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV 250 (344)
T ss_dssp TSCEEEEETTSSSCEEECC-------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC
T ss_pred ccccccccccccceeeeeecce---------------eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE
Confidence 7889999843 3 33331110 00123456655556777777777788888888766554
No 146
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.37 E-value=1.9 Score=42.78 Aligned_cols=122 Identities=11% Similarity=0.015 Sum_probs=79.7
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
.-..|++.|+|.++++-+..+.|+.++... +............ ..........++++++|.++++-+.+
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~---~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRT---GHQLQVYNREPDR--------NDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETTT---TEEEEEECCCCSS--------SCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECCC---CcEEEEecccccc--------cccccCceEEEEECCCCCEEEEEECC
Confidence 356899999999999988889999999862 3322222111000 01123345789999999999988889
Q ss_pred CeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 164 MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 164 ~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
+.|+.+|.. + +..+..-.. + .-..-.++++ .++|.++++-...+.|+..++.+
T Consensus 320 g~i~vwd~~~~~~~~~~~~~~~----~---------h~~~v~~l~~-s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVLNLGTLQN----S---------HEGRISCLGL-SSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCEEEEETTTCCEEEEECCSCS----S---------CCCCCCEEEE-CSSSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEECCCCceEEEEecccC----C---------CCCceEEEEE-CCCCCEEEEeeCCCCEEEEecCC
Confidence 999999953 3 333311100 0 1113456774 67888888888888999888764
No 147
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.30 E-value=3.5 Score=38.56 Aligned_cols=113 Identities=11% Similarity=0.126 Sum_probs=71.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
....++++++|.++++-..++.|+.++... +........ .-.....++++++|+++++-+.+
T Consensus 143 ~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~---~~~~~~~~~---------------~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSDGNIAVWDLHN---QTLVRQFQG---------------HTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECC---------------CSSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCC---Cceeeeeec---------------ccCceEEEEECCCCCEEEEEecC
Confidence 467899999998777777788999999762 332222111 01246789999999877777778
Q ss_pred CeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 164 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 164 ~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+.|+.+|... +..+... .....+++ .+++.++++-..++.|+.+++.....
T Consensus 205 g~i~~~d~~~~~~~~~~~~~------------------~~v~~~~~-s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHDFT------------------SQIFSLGY-CPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp SEEEEEETTTTEEEEEEECS------------------SCEEEEEE-CTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred CcEEEEECCCCceEeeecCC------------------CceEEEEE-CCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 8999999543 2222110 12344553 45555555555567777777766544
No 148
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.27 E-value=1.5 Score=48.55 Aligned_cols=115 Identities=4% Similarity=-0.015 Sum_probs=68.8
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..-..|+.|++|.|||.-. +.+.+++.. .++...+.... .. .......|+.|++|+|||+-.
T Consensus 88 n~I~~i~~d~~g~lWigT~--~Gl~~yd~~---~~~f~~~~~~~-------~~-----~~~~i~~i~~d~~g~lwi~t~- 149 (795)
T 4a2l_A 88 DISRIVKTDSQGRVWIGTR--DGLSRYDEE---KDIFQNFFYEK-------NG-----KHLQVNGIEEISPEQLLISTP- 149 (795)
T ss_dssp SCEEEEEECTTSCEEEEES--SCEEEEETT---TTEEEEECCEE-------TT-----EECCCCEEEEEETTEEEEEET-
T ss_pred cceeEEEECCCCCEEEEeC--CchheeCCC---CCeEEeccccc-------cC-----CCceEEEEEECCCCCEEEEEC-
Confidence 4566889999999999864 468999875 23444332110 00 001156799999999999875
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCC-CceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSN-DFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~-P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+.|.+++... +..+.. +. .... ...|+ .+.++.|||....+ .|.++++.+..+
T Consensus 150 -~gl~~~~~~~~~~~~~~~-----------~~----~~~~~i~~i~-~d~~g~lwigt~~~-Gl~~~~~~~~~~ 205 (795)
T 4a2l_A 150 -EGLIMFDIKESKFIDDSF-----------ST----AMHKTIASTL-YRQGDQIYIGTSTD-GLYTYSITQKTF 205 (795)
T ss_dssp -TEEEEEETTTTEEECSSS-----------CH----HHHTCCEEEE-EEETTEEEEEESSS-CEEEEETTTCCE
T ss_pred -CceEEEECCCCEEEeccC-----------CC----CCCcceEEEE-ECCCCCEEEEECCC-CEEEEeCCCCeE
Confidence 5688888543 221110 00 0011 34554 56788898876433 477777655443
No 149
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.14 E-value=4.7 Score=40.76 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=66.1
Q ss_pred CeeEEEEcCCCc-EEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEE
Q 010579 84 EPFSVAVSPSGE-LLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 159 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~--n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVA 159 (507)
....++++|||. |+++... +..|+.++..+ ++...+.+.. .....++++|||+ |+++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t---g~~~~l~~~~----------------~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN---GAVRQVASFP----------------RHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEEEECCS----------------SCEEEEEECTTSSEEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCC---CcEEEeecCC----------------CcccCEEEcCCCCEEEEE
Confidence 356889999997 4444332 35999999873 4444443321 1356899999998 5545
Q ss_pred eC--CCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCe-EEEEeC--CCCeEEEEECCCCc
Q 010579 160 DT--MNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDR--GNQAIREIQLHDDD 232 (507)
Q Consensus 160 Ds--~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~-LyVaD~--gn~rIr~I~l~~~~ 232 (507)
-. ++..|+.++..+ +..+.+.. .....+++ .++|. |+++.. +..+|+.+++.+..
T Consensus 241 ~~~~g~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~~-spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQIRQVTDGR-----------------SNNTEPTW-FPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp ECTTSSCEEEEEETTTCCEEECCCCS-----------------SCEEEEEE-CTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EecCCCceEEEEECCCCCEEeCcCCC-----------------CcccceEE-CCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 43 245799998543 43332210 12234554 44444 554442 33478888887765
Q ss_pred ee
Q 010579 233 CS 234 (507)
Q Consensus 233 ~~ 234 (507)
+.
T Consensus 303 ~~ 304 (415)
T 2hqs_A 303 PQ 304 (415)
T ss_dssp CE
T ss_pred EE
Confidence 43
No 150
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.11 E-value=4.2 Score=44.78 Aligned_cols=126 Identities=10% Similarity=0.051 Sum_probs=80.1
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
....+|+.|++|+|||+-.. +.|.++++.+ +.+..+.. . ++. .-+....|+.|++|+|||+..
T Consensus 495 ~~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~---~~~~~~~~-~-------~~l----~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFG-GGVGIYTPDM---QLVRKFNQ-Y-------EGF----CSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEESS-SCEEEECTTC---CEEEEECT-T-------TTC----SCSCEEEEEECTTSCEEEEET-
T ss_pred ceeEEEEEcCCCCEEEEEcC-CCEEEEeCCC---CeEEEccC-C-------CCC----CCCeeEEEEECCCCCEEEEEC-
Confidence 46788999999999999754 4588898762 34443321 1 110 123567899999999999976
Q ss_pred CCeE-EEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee-CCC
Q 010579 163 NMAI-RKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYD 238 (507)
Q Consensus 163 N~rI-rk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~-~~~ 238 (507)
..+ .+++... +..+. .. +|... +...+|+ .|.+|+||++. ++-|.++++....+.. ...
T Consensus 558 -~Glv~~~d~~~~~~~~~~-~~--------~gl~~----~~i~~i~-~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 558 -EGLVCFPSARNFDYQVFQ-RK--------EGLPN----THIRAIS-EDKNGNIWAST--NTGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp -TEEEEESCTTTCCCEEEC-GG--------GTCSC----CCCCEEE-ECSSSCEEEEC--SSCEEEEETTTTEEEEECGG
T ss_pred -CCceEEECCCCCcEEEcc-cc--------CCCCC----ceEEEEE-ECCCCCEEEEc--CCceEEEECCCCceEEeccc
Confidence 345 8888644 44431 11 12111 1234666 68899999996 4559999988765543 333
Q ss_pred CCcc
Q 010579 239 DTFH 242 (507)
Q Consensus 239 ~G~p 242 (507)
.|++
T Consensus 621 dGl~ 624 (781)
T 3v9f_A 621 NNIP 624 (781)
T ss_dssp GTCC
T ss_pred CCcc
Confidence 4544
No 151
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.09 E-value=1.1 Score=44.71 Aligned_cols=113 Identities=16% Similarity=0.121 Sum_probs=74.2
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 164 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~ 164 (507)
-..|+++++|.++++-...+.|+.++... ++...... |+ -.....|++.++|+.+++-+..+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~---~~~~~~~~------~h---------~~~v~~~~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIEN---RKIVMILQ------GH---------EQDIYSLDYFPSGDKLVSGSGDR 187 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEEC------CC---------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCC---CcEEEEEc------cC---------CCCEEEEEEcCCCCEEEEecCCC
Confidence 45899999999888888889999999862 33322221 11 12356899999999888877888
Q ss_pred eEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 165 AIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 165 rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.|+.+|.. + +.++... .....+++.+.++.++++-...+.|+.+++....+
T Consensus 188 ~v~iwd~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSIE------------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp EEEEEETTTTEEEEEEECS------------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred cEEEEECCCCeeEEEEEcC------------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 99999843 3 2233110 01234554334677777777777888888766544
No 152
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.93 E-value=4.2 Score=44.70 Aligned_cols=129 Identities=8% Similarity=0.052 Sum_probs=80.7
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.....|+.|++|+|||+-. +.|.++++.. +++..+.... +.. ..-+....|+.|++|+|||+-.+
T Consensus 450 ~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~---~~~~~~~~~~-------~~~---~~~~~i~~i~~d~~g~lWigt~~ 514 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTH--AGVFVIDLAS---KKVIHHYDTS-------NSQ---LLENFVRSIAQDSEGRFWIGTFG 514 (781)
T ss_dssp CCEEEEEECTTSEEEEEET--TEEEEEESSS---SSCCEEECTT-------TSS---CSCSCEEEEEECTTCCEEEEESS
T ss_pred CeEEEEEECCCCCEEEEEC--CceEEEeCCC---CeEEecccCc-------ccc---cccceeEEEEEcCCCCEEEEEcC
Confidence 4567899999999999975 5899999863 3343332111 000 01246789999999999999763
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee-CCCC
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDD 239 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~-~~~~ 239 (507)
+ .|.+++.++ +..+.. . ++.. -+...+|+ .|.+|.|||+.. ++.|.++++.+..+.. ....
T Consensus 515 ~-Gl~~~~~~~~~~~~~~~-~--------~~l~----~~~i~~i~-~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~ 578 (781)
T 3v9f_A 515 G-GVGIYTPDMQLVRKFNQ-Y--------EGFC----SNTINQIY-RSSKGQMWLATG-EGLVCFPSARNFDYQVFQRKE 578 (781)
T ss_dssp S-CEEEECTTCCEEEEECT-T--------TTCS----CSCEEEEE-ECTTSCEEEEET-TEEEEESCTTTCCCEEECGGG
T ss_pred C-CEEEEeCCCCeEEEccC-C--------CCCC----CCeeEEEE-ECCCCCEEEEEC-CCceEEECCCCCcEEEccccC
Confidence 3 488898654 343321 0 1111 12335665 688999999987 5554888887654432 3334
Q ss_pred Ccc
Q 010579 240 TFH 242 (507)
Q Consensus 240 G~p 242 (507)
|+|
T Consensus 579 gl~ 581 (781)
T 3v9f_A 579 GLP 581 (781)
T ss_dssp TCS
T ss_pred CCC
Confidence 444
No 153
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.83 E-value=5.1 Score=39.52 Aligned_cols=80 Identities=11% Similarity=0.019 Sum_probs=53.3
Q ss_pred CcceEEEcCCCCEEEEeCCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCC
Q 010579 144 HPKGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN 220 (507)
Q Consensus 144 ~P~GIaVd~dGnIYVADs~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn 220 (507)
....|+++++|+.+++=+..+.|+.+|.. + +.++..... . ..........+++ ..+|.++++-..+
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~-----~-----~~~~~~~v~~~~~-s~~g~~l~~g~~d 319 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD-----R-----NDNELPIVTSVAF-SISGRLLFAGYSN 319 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS-----S-----SCCSSCSCSEEEE-CSSSSEEEEECTT
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc-----c-----cccccCceEEEEE-CCCCCEEEEEECC
Confidence 35689999999999988888899999953 4 333322110 0 0111223456774 6778888888888
Q ss_pred CeEEEEECCCCcee
Q 010579 221 QAIREIQLHDDDCS 234 (507)
Q Consensus 221 ~rIr~I~l~~~~~~ 234 (507)
+.|+.++.....+.
T Consensus 320 g~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 320 GDCYVWDTLLAEMV 333 (380)
T ss_dssp SCEEEEETTTCCEE
T ss_pred CCEEEEECCCCceE
Confidence 99999988765543
No 154
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.72 E-value=1.6 Score=43.11 Aligned_cols=117 Identities=12% Similarity=0.137 Sum_probs=74.1
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEe---
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD--- 160 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVAD--- 160 (507)
....|+++++|.++++-+..+.|+.++... +........ ++ . -..+..+++.++|.++++-
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~-----~~-~-------~~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPRK---GTVVAEKDR-----PH-E-------GTRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTT---TEEEEEEEC-----SS-C-------SSSCCEEEECSTTEEEEEEECT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCCC---Cceeeeecc-----CC-C-------CCcceEEEEcCCCcEEEEeccC
Confidence 457788888888777766778888888752 332222100 00 0 0135789999999877776
Q ss_pred CCCCeEEEEcCCC----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 161 TMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 161 s~N~rIrk~d~~G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
..++.|+.+|... +.+..... -.....+++.++...|+++....+.|+.+++....
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDT----------------SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCC----------------CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCceEEEEcCccccCCceEEeccC----------------CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 5678899999543 22221100 11245667655556677788788899999987755
No 155
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.66 E-value=5.4 Score=38.55 Aligned_cols=114 Identities=12% Similarity=0.209 Sum_probs=76.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
....++++|+|.++++-...+.|..++... +... .+.+. -.....++++++|+++++=..
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~---~~~~~~~~~~----------------~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVES---GKKEYSLDTR----------------GKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTT---CSEEEEEECS----------------SSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCC---CceeEEecCC----------------CceEEEEEECCCCCEEEEEcC
Confidence 345789999999888888889999998762 2222 22111 123568999999998887777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
++.|+.+|.. + +.++.+-. .....+++ .+++.++++-...+.|+.+++....+.
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~-----------------~~v~~l~~-spd~~~l~s~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHA-----------------MPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCS-----------------SCCCEEEE-CTTSCEEEEECTTSCEEEEETTTCCEE
T ss_pred CCeEEEEECCCCcEEEEEcccC-----------------CceeEEEE-cCCCCEEEEEcCCCeEEEEECCCccee
Confidence 8889999943 4 33442210 12345664 567777777777788888888765544
No 156
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.57 E-value=5.7 Score=38.54 Aligned_cols=112 Identities=9% Similarity=0.009 Sum_probs=74.9
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~ 162 (507)
....+++.++|.++++-...+.|+.++..+ ..+..+.+. -.....|+++++|. ++++-+.
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKLH----------------KAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEECS----------------SSCEEEEEECSSCTTEEEEEET
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEeccC----------------CCcEEEEEECCCCCCEEEEEeC
Confidence 367888999988888877888999998752 223333221 13456899999998 8887777
Q ss_pred CCeEEEEcCC-----C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcC-CCeEEEEeCCCCeEEEEECCCCce
Q 010579 163 NMAIRKISDT-----G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 163 N~rIrk~d~~-----G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~-~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.+.|+.+|.. + +.++ +. -.....|++ .+ ++.++++-...+.|+.+++....+
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~-~~-----------------~~~v~~~~~-s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEM-PH-----------------EKPVNAAYF-NPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEE-EC-----------------SSCEEEEEE-CTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred CCEEEEEeCCCCCcccceEEEe-cC-----------------CCceEEEEE-cCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 8889999832 2 2222 10 113356665 45 677666666778899998876543
No 157
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.41 E-value=1.5 Score=43.28 Aligned_cols=118 Identities=11% Similarity=0.020 Sum_probs=74.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~ 162 (507)
.-..|++.|+|.++++-...+.|+.++... +......- ++ -.....|++.+++. ++++-..
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~---~~~~~~~~------~h---------~~~v~~v~~s~~~~~~~~s~~~ 202 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ---KAVLKSYN------AH---------SSEVNCVAACPGKDTIFLSCGE 202 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTT---TEEEEEEC------CC---------SSCEEEEEECTTCSSCEEEEET
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCC---CcEEEEEc------CC---------CCCEEEEEEccCCCceeeeecc
Confidence 346789999999888888889999999762 33222211 11 12356788988775 7777777
Q ss_pred CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
++.|+.+|... +..+... ..-..+..|++.+.++.++++-..++.|+.+++....+.
T Consensus 203 dg~v~~wd~~~~~~~~~~~~~---------------~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~ 262 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDFC---------------ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA 262 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCCT---------------TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC
T ss_pred CCceEEEECCCCceeeeeeec---------------cccccccchhhhhcccceEEEeecccceeEEECCCCcEe
Confidence 78899988432 1111110 001134566665555677776666788888888765543
No 158
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.37 E-value=1.7 Score=43.00 Aligned_cols=118 Identities=13% Similarity=0.144 Sum_probs=71.5
Q ss_pred CeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCC-----CccEEEecCCCCccccCCCCcccccCCCcceEEEcCCC-CE
Q 010579 84 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPY-----SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NI 156 (507)
Q Consensus 84 ~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~-----g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG-nI 156 (507)
.-..|++++ +++++++-+..+.|+.++...... ..+..+.+. -.....|++.++| ++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH----------------TKRVGIVAWHPTAQNV 146 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC----------------SSCEEEEEECSSBTTE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC----------------CCeEEEEEECcCCCCE
Confidence 457899999 888888888889999999763210 112222221 1345689999998 67
Q ss_pred EEEeCCCCeEEEEcCC-C--cEEEe-cCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 157 YIADTMNMAIRKISDT-G--VTTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 157 YVADs~N~rIrk~d~~-G--VstIa-GG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
+++-+..+.|+.+|.. + +.++. .+. -....++++ .+++.++++-...+.|+.+++....
T Consensus 147 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVGTGAAVLTLGPDVH----------------PDTIYSVDW-SRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECTTTC----------------CSCEEEEEE-CTTSSCEEEEETTSEEEEEETTTTE
T ss_pred EEEEcCCCEEEEEECCCCCccEEEecCCC----------------CCceEEEEE-CCCCCEEEEEecCCcEEEEeCCCCc
Confidence 7776677789999843 3 33331 110 012345553 4455555554556677777766655
Q ss_pred ee
Q 010579 233 CS 234 (507)
Q Consensus 233 ~~ 234 (507)
+.
T Consensus 210 ~~ 211 (402)
T 2aq5_A 210 VV 211 (402)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 159
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.31 E-value=4.4 Score=38.31 Aligned_cols=72 Identities=8% Similarity=0.049 Sum_probs=50.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
....++++++|.++++-..++.|+.++..... ..+..+.+. -.....++++++|+++++-+.+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNY-EYVDSIDLH----------------EKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTT-EEEEEEECC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc-EeEEEEecC----------------CCceeEEEECCCCCEEEEecCC
Confidence 67788999999877777778999999986210 112222211 1245689999999977777778
Q ss_pred CeEEEEcCC
Q 010579 164 MAIRKISDT 172 (507)
Q Consensus 164 ~rIrk~d~~ 172 (507)
+.|+.+|..
T Consensus 240 ~~i~v~d~~ 248 (369)
T 3zwl_B 240 TNSFLVDVS 248 (369)
T ss_dssp SEEEEEETT
T ss_pred ceEEEEECC
Confidence 889999943
No 160
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.24 E-value=5.6 Score=37.46 Aligned_cols=114 Identities=18% Similarity=0.239 Sum_probs=73.2
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEE-EecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKL-VAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~-vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|+++++|.++++-...+.|+.++... +.... +.+. -.....|+++++|+++++=..
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~---~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~ 85 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGH----------------KLGISDVAWSSDSNLLVSASD 85 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEEECCC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCC---cccchhhccC----------------CCceEEEEEcCCCCEEEEECC
Confidence 456899999999888877788999998752 33322 2211 123568999999998888777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
++.|+.++.. + +.++.+.. ..-..+++ .+++.++++-...+.|+.+++....+.
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~~-----------------~~v~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGHS-----------------NYVFCCNF-NPQSNLIVSGSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECCS-----------------SCEEEEEE-CSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCEEEEEECCCCcEEEEEcCCC-----------------CCEEEEEE-cCCCCEEEEEeCCCcEEEEECCCCEEE
Confidence 8889999843 3 44443211 01234443 455566666556677777777665544
No 161
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.24 E-value=6.4 Score=38.09 Aligned_cols=109 Identities=6% Similarity=0.054 Sum_probs=69.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
....|+++|+|+++++-+..+.|+.++... +......... ........++++++|.++++=+.+
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~~~-------------~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRA---DQELMTYSHD-------------NIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECCT-------------TCCSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCC---CcEEEEEccC-------------CcccceEEEEECCCCCEEEEECCC
Confidence 467899999999988888889999999762 2222211110 011235689999999988888888
Q ss_pred CeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEE
Q 010579 164 MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREI 226 (507)
Q Consensus 164 ~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I 226 (507)
+.|+.+|.. + +.++.+-. ..-.+|++ .+++.++++-...+.|+..
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~~-s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHD-----------------NRVSCLGV-TDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEEE-CTTSSCEEEEETTSCEEEE
T ss_pred CeEEEEEcccCcEeeEeecCC-----------------CcEEEEEE-cCCCCEEEEEcCCccEEec
Confidence 899999943 3 44443211 12235554 5566655555555666554
No 162
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.16 E-value=3.4 Score=41.76 Aligned_cols=116 Identities=12% Similarity=0.170 Sum_probs=71.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc--cEEEecCCCCccccCCCCcccccCCCcceEEEcCC---CCEEE
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR--PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR---GNIYI 158 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~--i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d---GnIYV 158 (507)
.+..|+++++|.++++-...+.|+.++........ ...+ .+ .-.....|+++++ |.+++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~-------~~---------h~~~v~~~~~sp~~~~~~~l~ 214 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPI-------LG---------HVSMLTDVHLIKDSDGHQFII 214 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCS-------EE---------CSSCEEEEEEEECTTSCEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceee-------ec---------ccCceEEEEEcCCCCCCcEEE
Confidence 57899999999866665567899999875211100 0011 11 1234678999999 87666
Q ss_pred EeCCCCeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 159 ADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 159 ADs~N~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+-...+.|++++. .+ +.++..+. -....++++ . ++.++++-...+.|+.+++....+
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~~h----------------~~~v~~~~~-s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLFGH----------------KHFVSSICC-G-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECCCC----------------SSCEEEEEE-C-STTEEEEEESSSEEEEEETTTCCE
T ss_pred EEcCCCcEEEEECCCCceeeeeecCC----------------CCceEEEEE-C-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 6556778888883 33 33332111 113456665 4 666666666778888888765443
No 163
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.13 E-value=5 Score=40.23 Aligned_cols=116 Identities=17% Similarity=0.171 Sum_probs=78.1
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
.-..|+++++|.++++-+..+.|+.++..+ +...... .|+ -.....++++++|+.+++=+..
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~---~~~~~~~------~~h---------~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQG---FECIRTM------HGH---------DHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTS---SCEEECC------CCC---------SSCEEEEEECSSSSEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---CceeEEE------cCC---------CCCEEEEEEeCCCCEEEEEeCC
Confidence 456899999999988888889999998762 2211111 111 1235689999999988887788
Q ss_pred CeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee
Q 010579 164 MAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 235 (507)
Q Consensus 164 ~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~ 235 (507)
+.|+.+|. .+ +.++.+.. ..-..+. ...++.++++-...+.|+.+++....|..
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~g~~l~s~s~D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHR-----------------EWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKECKA 270 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEEEEeCCC-----------------ccEEEEE-ECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 89999994 34 44553311 0123444 46677777777778889999887766543
No 164
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.08 E-value=1.8 Score=40.99 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=71.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|+++++|.++++-..++.|+.++... +.. ..+.+. -.....|+++++|+++++-..
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLN---GERLGTLDGH----------------TGTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTT---CCEEEEECCC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---chhhhhhhhc----------------CCcEEEEEEcCCCCEEEEEeC
Confidence 466899999999888777788999998752 332 222211 123568999999997777777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCC-----CeEEEEECCCC
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-----QAIREIQLHDD 231 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn-----~rIr~I~l~~~ 231 (507)
++.|+.++.. + +.++... .....+++ .+++..+++-..+ +.|+.+++...
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~------------------~~v~~~~~-~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWKSP------------------VPVKRVEF-SPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp TTEEEEEETTTCCEEEEEECS------------------SCEEEEEE-CTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEeecC------------------CCeEEEEE-ccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 8889999843 3 3333210 12345664 4555555555555 77887776554
No 165
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.05 E-value=4.9 Score=42.99 Aligned_cols=118 Identities=9% Similarity=0.077 Sum_probs=63.9
Q ss_pred CeeEEEEcCCCc-EEEEeCCC----CeEEEEeCCCCCCC-ccEEEecCCCCccccCCCCcccccCCCcceEEEcC--CCC
Q 010579 84 EPFSVAVSPSGE-LLVLDSEN----SNIYKISTSLSPYS-RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGN 155 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n----~rI~ki~~~g~~~g-~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~--dGn 155 (507)
.+..++++|||. |+++.... ..|+.++..+ + ....+.... . . ...+....+++++ ||.
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~---g~~~~~~~~~~--~----~-----~~~~~~~~~~~sp~~dg~ 324 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET---GRFVRTLFVET--D----K-----HYVEPLHPLTFLPGSNNQ 324 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT---CCEEEEEEEEE--C----S-----SCCCCCSCCEECTTCSSE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC---CceeeEEEEcc--C----C-----CeECccCCceeecCCCCE
Confidence 467899999998 55543221 3888998863 4 333333210 0 0 0112235788998 888
Q ss_pred EEE-EeC-CCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCce-EEEEcCCCeEEEEeCCCC----eEEEE
Q 010579 156 IYI-ADT-MNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFD-VVYVGSSCSLLVIDRGNQ----AIREI 226 (507)
Q Consensus 156 IYV-ADs-~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~g-Ia~vd~~G~LyVaD~gn~----rIr~I 226 (507)
+++ ++. +..+|..++.++ +..+..+.. .... +++.++...||++....+ .|+.+
T Consensus 325 ~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~-----------------~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 325 FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEW-----------------EVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp EEEEECTTSSCEEEEEETTSCEEEECCCSSS-----------------CEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred EEEEEccCCccEEEEEECCCCEEEecCCCCe-----------------EEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 444 433 245777887444 444432210 0112 343333345777665544 78888
Q ss_pred ECCCCc
Q 010579 227 QLHDDD 232 (507)
Q Consensus 227 ~l~~~~ 232 (507)
++.+..
T Consensus 388 d~~~~~ 393 (706)
T 2z3z_A 388 DIKGGK 393 (706)
T ss_dssp ETTCCC
T ss_pred EcCCCC
Confidence 876644
No 166
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.03 E-value=1.9 Score=40.61 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=65.5
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
-..|+++|+|.++++-...+.|+.++... ... ..+.+. .....+++.+++.+..+- ..
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~---~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~-~d 276 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNE---GKHLYTLDGG-----------------DIINALCFSPNRYWLCAA-TG 276 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTT---TEEEEEEECS-----------------SCEEEEEECSSSSEEEEE-ET
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEecc---CceeeeecCC-----------------ceEEeeecCCCCceeecc-CC
Confidence 45778888888777777777888887652 221 111111 234577888887766554 36
Q ss_pred CeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 164 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 164 ~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
+.|+.++..+ +..+...... ....+.-..-.+|++ .+++.++++-...+.|+..++.+
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~~--------~~~~~h~~~v~~l~~-s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVIS--------TSSKAEPPQCTSLAW-SADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC---------------CCCCCEEEEEE-CTTSSEEEEEETTSCEEEEEEEC
T ss_pred CEEEEEECCCCeEEEecccccee--------eeccCCCCCEEEEEE-CCCCCEEEEEeCCCEEEEEeCCC
Confidence 7788888554 2222111000 000011112346664 67777777766778888887654
No 167
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.01 E-value=9 Score=42.16 Aligned_cols=127 Identities=8% Similarity=0.056 Sum_probs=79.5
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.....|+.|++|+|||+-. +.|.+++... +.+ .+.... .. ++ ..-+....|+.|++|+|||+-..
T Consensus 498 ~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~---~~~-~~~~~~-~~----~~----l~~~~i~~i~~d~~g~lWigT~~ 562 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE--EGLSVFKQEG---LDI-QKASIL-PV----SN----VTKLFTNCIYEASNGIIWVGTRE 562 (795)
T ss_dssp CCEEEEEECTTCCEEEEES--SCEEEEEEET---TEE-EECCCS-CS----CG----GGGSCEEEEEECTTSCEEEEESS
T ss_pred ceEEEEEECCCCCEEEEeC--CceEEEeCCC---CeE-EEecCC-CC----CC----CCCCeeEEEEECCCCCEEEEeCC
Confidence 3567899999999999986 5788988752 333 221100 00 00 01235678999999999999764
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee-CCCC
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDD 239 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~-~~~~ 239 (507)
.|.+++... +..+ ... +|... +...+|+ .|.+|+|||+. ++-|.++++....+.. ....
T Consensus 563 --Gl~~~d~~~~~~~~~-~~~--------~gl~~----~~i~~i~-~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~d 624 (795)
T 4a2l_A 563 --GFYCFNEKDKQIKRY-NTT--------NGLPN----NVVYGIL-EDSFGRLWLST--NRGISCFNPETEKFRNFTESD 624 (795)
T ss_dssp --CEEEEETTTTEEEEE-CGG--------GTCSC----SCEEEEE-ECTTSCEEEEE--TTEEEEEETTTTEEEEECGGG
T ss_pred --CceeECCCCCcEEEe-CCC--------CCCch----hheEEEE-ECCCCCEEEEc--CCceEEEcCCCCcEEEcCCcC
Confidence 689998654 3333 111 12111 1234565 68899999998 4779999998766543 3344
Q ss_pred Ccc
Q 010579 240 TFH 242 (507)
Q Consensus 240 G~p 242 (507)
|++
T Consensus 625 Gl~ 627 (795)
T 4a2l_A 625 GLQ 627 (795)
T ss_dssp TCS
T ss_pred CCc
Confidence 554
No 168
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.95 E-value=2.8 Score=40.68 Aligned_cols=132 Identities=15% Similarity=0.119 Sum_probs=74.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
....++++++| ++++-..++.|+.++... ++. ..+.+. .++. ..-.....|+++++|+++++-..
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~---~~~~~~~~~~----~~h~------~~~~~i~~i~~~~~~~~l~~~~~ 253 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNGTVQISELST---LRPLYNFESQ----HSMI------NNSNSIRSVKFSPQGSLLAIAHD 253 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTSEEEEEETTT---TEEEEEEECC----C---------CCCCCEEEEEECSSTTEEEEEEE
T ss_pred CceEEEECCCc-eEEEEeCCCcEEEEECCC---CceeEEEecc----cccc------ccCCccceEEECCCCCEEEEEec
Confidence 46789999999 888888889999999862 322 222220 0000 00124578999999997776666
Q ss_pred C---CeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 N---MAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N---~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
+ +.|+.+|. .+ +.++.+..... .... ...+.-.....+++ .+++.++++-..++.|+.+++....+.
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSS-QASL---GEFAHSSWVMSLSF-NDSGETLCSAGWDGKLRFWDVKTKERI 326 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC------------CCBSBSSCEEEEEE-CSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCceEEEEECCCCcccceeccCcccc-cccc---cccccCCcEEEEEE-CCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 6 78999994 33 44443210000 0000 00000112345554 455566666556777888877665543
No 169
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.87 E-value=5.2 Score=38.72 Aligned_cols=138 Identities=17% Similarity=0.112 Sum_probs=76.6
Q ss_pred CeeEEEEcCCCcEEEEeCCC---CeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEE
Q 010579 84 EPFSVAVSPSGELLVLDSEN---SNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 159 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n---~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVA 159 (507)
....|+++++|.++++-... +.|+.++... +. +..+.+......-... ..+.-.....++++++|+++++
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~ 308 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF---GERIGSLSVPTHSSQASLG---EFAHSSWVMSLSFNDSGETLCS 308 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTT---CCEEEEECBC--------C---CBSBSSCEEEEEECSSSSEEEE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCC---CcccceeccCccccccccc---ccccCCcEEEEEECCCCCEEEE
Confidence 56789999999988777766 8999999762 33 2233221000000000 0001234568999999998888
Q ss_pred eCCCCeEEEEcCC-C--cEEEecCcccCCCCC-CCCCccCc-----cCCCCceEEEEcCCC----------eEEEEeCCC
Q 010579 160 DTMNMAIRKISDT-G--VTTIAGGKWSRGVGH-VDGPSEDA-----KFSNDFDVVYVGSSC----------SLLVIDRGN 220 (507)
Q Consensus 160 Ds~N~rIrk~d~~-G--VstIaGG~~g~~~G~-~dg~~~~a-----~f~~P~gIa~vd~~G----------~LyVaD~gn 220 (507)
-+.++.|+.++.. + +.++...... .++ .|...... .-....++++. +++ .++++-...
T Consensus 309 ~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~v~~~~~~-~~g~~~~~~~~~~~~l~s~~~d 385 (397)
T 1sq9_A 309 AGWDGKLRFWDVKTKERITTLNMHCDD--IEIEEDILAVDEHGDSLAEPGVFDVKFL-KKGWRSGMGADLNESLCCVCLD 385 (397)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCGGG--CSSGGGCCCBCTTSCBCSSCCEEEEEEE-CTTTSBSTTCTTSCEEEEEETT
T ss_pred EeCCCeEEEEEcCCCceeEEEecccCc--ccchhhhhccccccccccCCceeEEEec-cccccccccccccceEEEecCC
Confidence 7788899999953 3 4455411000 000 00000000 01234577754 554 577776677
Q ss_pred CeEEEEECCC
Q 010579 221 QAIREIQLHD 230 (507)
Q Consensus 221 ~rIr~I~l~~ 230 (507)
+.|+.+++.+
T Consensus 386 g~i~iw~~~~ 395 (397)
T 1sq9_A 386 RSIRWFREAG 395 (397)
T ss_dssp TEEEEEEEEC
T ss_pred CcEEEEEcCC
Confidence 8898888654
No 170
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.82 E-value=1.7 Score=43.68 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=75.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..++++|+|.++++-+..+.|+.++... +.. .++.|. -.....|+++++|+++++=+.
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~---~~~~~~l~~h----------------~~~V~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYET---GDFERTLKGH----------------TDSVQDISFDHSGKLLASCSA 170 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTT---CCCCEEECCC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CcEEEEEecc----------------CCcEEEEEEcCCCCEEEEEeC
Confidence 466899999999999988889999999763 322 232221 123568999999998888777
Q ss_pred CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
.+.|+.+|..+ +.++.+ +. ..-..+++ .+++..+++-...+.|+.+++....|.
T Consensus 171 D~~i~iwd~~~~~~~~~~~~--------h~---------~~V~~v~~-~p~~~~l~s~s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTMHG--------HD---------HNVSSVSI-MPNGDHIVSASRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp TSCCCEEETTSSCEEECCCC--------CS---------SCEEEEEE-CSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCeEEEEeCCCCceeEEEcC--------CC---------CCEEEEEE-eCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 88889888554 222211 00 12234553 455666666666777888887766654
No 171
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.66 E-value=1.4 Score=42.12 Aligned_cols=116 Identities=8% Similarity=-0.009 Sum_probs=69.4
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 164 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~ 164 (507)
-..++++++|+++++-..++.|+.++........+..+.+. -.....|+++++|+++++-..++
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~~~~~dg 74 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH----------------NGQVTGVDWAPDSNRIVTCGTDR 74 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC----------------SSCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC----------------CCcccEEEEeCCCCEEEEEcCCC
Confidence 45889999999888877789999998762100022333222 12456899999999777766677
Q ss_pred eEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 165 AIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 165 rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
.|+.++. .+ ...+.... .-.....+++ ..++.++++-..++.|+.+++....
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~---------------~~~~v~~~~~-~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILR---------------INRAARCVRW-APNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp CEEEEEEETTEEEEEEECCC---------------CSSCEEEEEE-CTTSSEEEEEETTSSEEEEEEETTT
T ss_pred eEEEEECCCCeeeeeEEeec---------------CCCceeEEEE-CCCCCEEEEEeCCCEEEEEEecCCC
Confidence 8888883 33 22221100 0112445664 4455555555556777776665543
No 172
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.61 E-value=7.9 Score=37.53 Aligned_cols=113 Identities=10% Similarity=0.026 Sum_probs=75.0
Q ss_pred CeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|++.+ +++++++-...+.|+.++..+ ..+..+.+.. + .-.....+++.++|+++++-..
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~----~---------~~~~v~~~~~~~~~~~l~~~~~ 183 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVIQVFAKTD----S---------WDYWYCCVDVSVSRQMLATGDS 183 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEEEEEECCC----C---------SSCCEEEEEEETTTTEEEEEET
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---CceEEEeccC----C---------CCCCeEEEEECCCCCEEEEECC
Confidence 567899999 677777777789999999873 3344443321 0 0124568999999998887777
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCe-EEEEeCCCCeEEEEECCC
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~-LyVaD~gn~rIr~I~l~~ 230 (507)
++.|+.++..+ +.++.+.. ....+|++ .+++. ++++-...+.|+.+++..
T Consensus 184 d~~i~i~d~~~~~~~~~~~h~-----------------~~v~~~~~-~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 184 TGRLLLLGLDGHEIFKEKLHK-----------------AKVTHAEF-NPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TSEEEEEETTSCEEEEEECSS-----------------SCEEEEEE-CSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEECCCCEEEEeccCC-----------------CcEEEEEE-CCCCCCEEEEEeCCCEEEEEeCCC
Confidence 88999999766 44443211 12345664 44454 666666677888888765
No 173
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=92.56 E-value=2.6 Score=40.18 Aligned_cols=111 Identities=8% Similarity=0.060 Sum_probs=73.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-.+|+++|+|.++++-...+.|+.++... +. +..+.+.. ..-..+++.++|+++++=+.
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~---~~~~~~~~~~~----------------~~v~~~~~~~~~~~l~s~s~ 75 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYET---QVEVRSIQVTE----------------TPVRAGKFIARKNWIIVGSD 75 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT---TEEEEEEECCS----------------SCEEEEEEEGGGTEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCC---CceeEEeeccC----------------CcEEEEEEeCCCCEEEEECC
Confidence 356899999999888888889999999862 32 22222211 12347888899998888777
Q ss_pred CCeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 163 NMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 163 N~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
.+.|+.+|. .+ +.++.+-. ..-.+|++ .+++.++++-...+.|+..++...
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~~-~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHP-----------------DYIRSIAV-HPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCS-----------------SCEEEEEE-CSSSSEEEEEETTSCEEEEEGGGT
T ss_pred CCEEEEEECCCCcEEEEEeCCC-----------------CcEEEEEE-cCCCCEEEEECCCCeEEEEECCCC
Confidence 889999994 33 34443211 12245554 556666666666778888887654
No 174
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.48 E-value=2.4 Score=40.16 Aligned_cols=115 Identities=10% Similarity=0.093 Sum_probs=71.2
Q ss_pred CeeEEEEcCC---CcEEEEeCCCCeEEEEeCCCCCCCcc--EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEE
Q 010579 84 EPFSVAVSPS---GELLVLDSENSNIYKISTSLSPYSRP--KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYI 158 (507)
Q Consensus 84 ~P~gIaVd~d---G~LYVaDs~n~rI~ki~~~g~~~g~i--~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYV 158 (507)
.-..|+++++ |.++++-..++.|+.++.... +.. ..+.+. -.....|+++++|++++
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS--GQTIPKAQQMH----------------TGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT--SCEEEEEEEEC----------------SSCEEEEEECTTSSEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC--CceeEEEeccc----------------cCCEEEEEECcCCCEEE
Confidence 4568899998 688887777889999987621 111 222221 12456899999998777
Q ss_pred EeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEE-cCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 159 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV-GSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 159 ADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~v-d~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+=+.++.|+.++... +..+.+.. ....++++. ..++.++++-..++.|+.+++....+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHD-----------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECS-----------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred EEcCCCcEEEEEcCCCCceeecccc-----------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 766788899999544 22222110 112344431 45666666666667777777765543
No 175
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.07 E-value=6.7 Score=35.47 Aligned_cols=111 Identities=14% Similarity=0.198 Sum_probs=60.0
Q ss_pred CeeEEEEcCCCcEEEEeC----CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEE
Q 010579 84 EPFSVAVSPSGELLVLDS----ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYI 158 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs----~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYV 158 (507)
....++++++|..+++-. ...+|+.++..+ +....+... .....++++++|+ |++
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-----------------~~~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG---GTPRLMTKN-----------------LPSYWHGWSPDGKSFTY 145 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC---CCCEECCSS-----------------SSEEEEEECTTSSEEEE
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCC---CceEEeecC-----------------CCccceEECCCCCEEEE
Confidence 456789999997544433 357888888753 223222211 1256789999998 554
Q ss_pred EeCCCC--eEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCe-EEEEe--CCCCeEEEEECCCC
Q 010579 159 ADTMNM--AIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVID--RGNQAIREIQLHDD 231 (507)
Q Consensus 159 ADs~N~--rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~-LyVaD--~gn~rIr~I~l~~~ 231 (507)
+...+. +|..++..+ +..+... -.....+++ .+++. |+++. .+..+|+.+++.+.
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~~~~-----------------~~~~~~~~~-s~dg~~l~~~~~~~~~~~i~~~~~~~~ 207 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDIDSGVETRLTHG-----------------EGRNDGPDY-SPDGRWIYFNSSRTGQMQIWRVRVDGS 207 (297)
T ss_dssp EEEETTEEEEEEEETTTCCEEECCCS-----------------SSCEEEEEE-CTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred EECCCCceEEEEEECCCCcceEcccC-----------------CCccccceE-CCCCCEEEEEecCCCCccEEEECCCCC
Confidence 544444 555665443 3322111 012345564 44444 55553 34556777765554
Q ss_pred c
Q 010579 232 D 232 (507)
Q Consensus 232 ~ 232 (507)
.
T Consensus 208 ~ 208 (297)
T 2ojh_A 208 S 208 (297)
T ss_dssp C
T ss_pred C
Confidence 3
No 176
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.01 E-value=0.97 Score=44.93 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=51.2
Q ss_pred CcceEEEcCCCCEEEEeCCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCC
Q 010579 144 HPKGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN 220 (507)
Q Consensus 144 ~P~GIaVd~dGnIYVADs~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn 220 (507)
.-..|+++|+|.++++=+..+.|+.+|.. + +.++..+. -..-.+|++ .++|.++++-+..
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH----------------~~~V~~v~f-Spdg~~laS~S~D 333 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH----------------SFAITEVTI-SPDSTYVASVSAA 333 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS----------------SSCEEEEEE-CTTSCEEEEEETT
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc----------------cCCEEEEEE-CCCCCEEEEEeCC
Confidence 34689999999988776677889999954 4 33442211 113457775 7788999988889
Q ss_pred CeEEEEECCCC
Q 010579 221 QAIREIQLHDD 231 (507)
Q Consensus 221 ~rIr~I~l~~~ 231 (507)
+.||.+++..+
T Consensus 334 ~tvrvw~ip~~ 344 (365)
T 4h5i_A 334 NTIHIIKLPLN 344 (365)
T ss_dssp SEEEEEECCTT
T ss_pred CeEEEEEcCCC
Confidence 99999998654
No 177
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=92.00 E-value=0.4 Score=52.62 Aligned_cols=61 Identities=13% Similarity=0.253 Sum_probs=44.9
Q ss_pred CCCeeEEEEcCCCcEEEEeCC------------CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEE
Q 010579 82 GMEPFSVAVSPSGELLVLDSE------------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLA 149 (507)
Q Consensus 82 ~~~P~gIaVd~dG~LYVaDs~------------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIa 149 (507)
+.+|-.|+||+.|+|||+.-. |+.++..++. .+.+..|+-.+.+ .-..|++
T Consensus 475 f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~---~g~~~rf~~~P~g--------------aE~TG~~ 537 (592)
T 3zwu_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA---TGEIRRFMVGPIG--------------CEVTGIS 537 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT---TCCEEEEEECCTT--------------CEEEEEE
T ss_pred ccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCC---CCeEEEEEeCCCC--------------ccCcCee
Confidence 579999999999999998643 4667777765 4667776654422 2456999
Q ss_pred EcCCCC-EEEE
Q 010579 150 VDDRGN-IYIA 159 (507)
Q Consensus 150 Vd~dGn-IYVA 159 (507)
+++||. |||+
T Consensus 538 fspDg~tlfvn 548 (592)
T 3zwu_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 999987 7775
No 178
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=91.91 E-value=2.1 Score=42.10 Aligned_cols=109 Identities=13% Similarity=0.132 Sum_probs=67.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
.-..|+++|+|.++++-+..+.|+.++... +......... ........++++++|.+.++-+..
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~---~~~~~~~~~~-------------~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRA---DREVAIYSKE-------------SIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECCT-------------TCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCC---CcEEEEEcCC-------------CcccceeEEEEeCCCCEEEEEECC
Confidence 355788888888777777778888888652 2221111110 011235688999999988887778
Q ss_pred CeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEE
Q 010579 164 MAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREI 226 (507)
Q Consensus 164 ~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I 226 (507)
+.|+.+|. .+ +.++.+-. .....|++ .+++.++++-...+.|+..
T Consensus 306 ~~i~vwd~~~~~~~~~l~~h~-----------------~~v~~l~~-spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 306 YTINVWDVLKGSRVSILFGHE-----------------NRVSTLRV-SPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp SCEEEEETTTCSEEEEECCCS-----------------SCEEEEEE-CTTSSCEEEEETTSEEEEE
T ss_pred CcEEEEECCCCceEEEEECCC-----------------CcEEEEEE-CCCCCEEEEEcCCCCEEec
Confidence 88999984 44 44443211 12346664 5667766666666777654
No 179
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.91 E-value=3.5 Score=40.41 Aligned_cols=72 Identities=24% Similarity=0.285 Sum_probs=50.9
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..-..|+++++|.++++-+..+.|+.++.... ..+..+.+. -.....|+++++|+++++-+.
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~ 201 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDG--SNPRTLIGH----------------RATVTDIAIIDRGRNVLSASL 201 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CCCEEEECC----------------SSCEEEEEEETTTTEEEEEET
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCC--cCceEEcCC----------------CCcEEEEEEcCCCCEEEEEcC
Confidence 35678999999998888788899999997631 122333221 123568999999987777667
Q ss_pred CCeEEEEcCC
Q 010579 163 NMAIRKISDT 172 (507)
Q Consensus 163 N~rIrk~d~~ 172 (507)
.+.|+.+|..
T Consensus 202 d~~v~iwd~~ 211 (420)
T 3vl1_A 202 DGTIRLWECG 211 (420)
T ss_dssp TSCEEEEETT
T ss_pred CCcEEEeECC
Confidence 7788888843
No 180
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.71 E-value=2.9 Score=40.43 Aligned_cols=123 Identities=14% Similarity=0.080 Sum_probs=68.4
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeC----CCCCCCc-------cEEEecCCCCccccCCCCcccccCCCcceEEEc
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKIST----SLSPYSR-------PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 151 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~----~g~~~g~-------i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd 151 (507)
.-..++++|+|. ++++-..++.|+.++. .. +. ...+.....+. .. ....-.....|+++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQE---GKKYWKLTIIAELRHPFALS-AS-----SGKTTNQVTCLAWS 117 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC---------CEEEEEEEEEECCCCCC------------CBCEEEEEEC
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCC---cccccccccccccccccccc-cc-----ccCCCCceEEEEEc
Confidence 356899999998 8777777789999887 52 33 11222111000 00 00011246789999
Q ss_pred CCCCEEEEeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 152 DRGNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 152 ~dGnIYVADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
++|+++++=..++.|+.++.++ +..+.+.. ....++++ .+++.++++-...+.|+.+++.
T Consensus 118 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----------------~~v~~~~~-~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWNKTGALLNVLNFHR-----------------APIVSVKW-NKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCC-----------------SCEEEEEE-CTTSSEEEEEETTCCEEEEETT
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeeccCCC-----------------ccEEEEEE-CCCCCEEEEEecCCeEEEEECC
Confidence 9999777766678899998666 34442210 12334553 3444444444445667777765
Q ss_pred CCce
Q 010579 230 DDDC 233 (507)
Q Consensus 230 ~~~~ 233 (507)
...+
T Consensus 180 ~~~~ 183 (425)
T 1r5m_A 180 SGTV 183 (425)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 5443
No 181
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.65 E-value=5.2 Score=40.24 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=73.0
Q ss_pred eeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEeCC
Q 010579 85 PFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM 162 (507)
Q Consensus 85 P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVADs~ 162 (507)
=+.|+++| +++++++-+..+.|+.++... +....+.- ..|+ -..-..|++.| +|+++++=+.
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~---~~~~~~~~----~~gH---------~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGI---KDKPTFIK----GIGA---------GGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSC---CSCCEEEC----CCSS---------SCCCCEEEECSSCTTEEEEECS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCC---CCceeEEE----ccCC---------CCCEEEEEEeCCCCCEEEEEeC
Confidence 46799998 567877777789999998763 22222111 0111 11345899997 6888888777
Q ss_pred CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 163 NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 163 N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.+.|+..|-.+ +.++...... -..-..+++ ..++.++++-...+.|+.+++.+..+
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~~~-~~~~~~l~~g~~dg~i~~wd~~~~~~ 243 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTI--------------NIWFCSLDV-SASSRMVVTGDNVGNVILLNMDGKEL 243 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSC--------------SCCCCCEEE-ETTTTEEEEECSSSBEEEEESSSCBC
T ss_pred CCEEEEeeccCCceeEEeccCCC--------------CccEEEEEE-CCCCCEEEEEeCCCcEeeeccCccee
Confidence 88899999655 3444322110 011234554 45666777766778888888876443
No 182
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.52 E-value=1.5 Score=44.33 Aligned_cols=115 Identities=10% Similarity=-0.008 Sum_probs=73.5
Q ss_pred eeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 85 PFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 85 P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
=.+|++.| +|+++++-+..+.|+.++..+ +....+.... . .-.....++++++|+++++=...
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKG---NILRVFASSD-T------------INIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTS---CEEEEEECCS-S------------CSCCCCCEEEETTTTEEEEECSS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccC---CceeEEeccC-C------------CCccEEEEEECCCCCEEEEEeCC
Confidence 45899997 788888888889999999862 3344443321 0 01123468899999988887778
Q ss_pred CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 164 MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 164 ~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
+.|+.+|..+ +.++.+ + -..-.+|++.+....++++-...+.|+.+++....
T Consensus 231 g~i~~wd~~~~~~~~~~~--------h---------~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 231 GNVILLNMDGKELWNLRM--------H---------KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp SBEEEEESSSCBCCCSBC--------C---------SSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred CcEeeeccCcceeEEEec--------c---------cceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 8899998665 222211 0 01224566544444566666667888888876543
No 183
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=91.40 E-value=11 Score=36.73 Aligned_cols=114 Identities=10% Similarity=0.087 Sum_probs=71.9
Q ss_pred eeEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 85 PFSVAVSP--SGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 85 P~gIaVd~--dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
-..+++.+ +|+++++-+..+.|+.++... +.. ..+.+. -...+.|+++++|+++++=+
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---~~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s 259 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRS---GQCVQAFETH----------------ESDVNSVRYYPSGDAFASGS 259 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTT---CCEEEEECCC----------------SSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCC---CcEEEEecCC----------------CCCeEEEEEeCCCCEEEEEe
Confidence 44666765 577888878889999999762 332 222211 12356899999999888877
Q ss_pred CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 162 MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 162 ~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
..+.|+.+|... +..+.... .......+++ ..++.++++-...+.|+.+++....+
T Consensus 260 ~D~~v~lwd~~~~~~~~~~~~~~---------------~~~~~~~~~~-s~~g~~l~~g~~d~~i~vwd~~~~~~ 318 (354)
T 2pbi_B 260 DDATCRLYDLRADREVAIYSKES---------------IIFGASSVDF-SLSGRLLFAGYNDYTINVWDVLKGSR 318 (354)
T ss_dssp TTSCEEEEETTTTEEEEEECCTT---------------CCSCEEEEEE-CTTSSEEEEEETTSCEEEEETTTCSE
T ss_pred CCCeEEEEECCCCcEEEEEcCCC---------------cccceeEEEE-eCCCCEEEEEECCCcEEEEECCCCce
Confidence 788899999543 23321110 0112345553 56677776666777888888765544
No 184
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.32 E-value=10 Score=36.04 Aligned_cols=135 Identities=10% Similarity=-0.004 Sum_probs=78.0
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
.....++++++|.++++-..++.|+.++........ ...+.. + .-.....|+++++|+++++-+
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~------~---------~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK------P---------IRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT------T---------CCSCEEEEEECTTSSEEEEEE
T ss_pred CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec------c---------cCCCeeEEEEcCCCCEEEEEc
Confidence 357789999998877776777888887765211000 111110 0 123467899999999887777
Q ss_pred CCCeEEEEcCC-------------------C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCC
Q 010579 162 MNMAIRKISDT-------------------G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN 220 (507)
Q Consensus 162 ~N~rIrk~d~~-------------------G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn 220 (507)
..+.|+.++.. + +.++.+ .-....++++ .+++.++++-...
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~~~-~~~~~~l~~~~~d 223 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-----------------SCGWVHGVCF-SANGSRVAWVSHD 223 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-----------------CSSCEEEEEE-CSSSSEEEEEETT
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCC-----------------CCCeEEEEEE-CCCCCEEEEEeCC
Confidence 77889988832 1 111110 0112345664 5566666665667
Q ss_pred CeEEEEECCCCceeeC--CCCCccceEEEEec
Q 010579 221 QAIREIQLHDDDCSDN--YDDTFHLGIFVLVA 250 (507)
Q Consensus 221 ~rIr~I~l~~~~~~~~--~~~G~p~gIa~~~~ 250 (507)
+.|+.+++....+... ...+....+++...
T Consensus 224 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 255 (372)
T 1k8k_C 224 STVCLADADKKMAVATLASETLPLLAVTFITE 255 (372)
T ss_dssp TEEEEEEGGGTTEEEEEECSSCCEEEEEEEET
T ss_pred CEEEEEECCCCceeEEEccCCCCeEEEEEecC
Confidence 8888888876555432 22223345555543
No 185
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.26 E-value=2.8 Score=42.28 Aligned_cols=114 Identities=11% Similarity=0.075 Sum_probs=75.9
Q ss_pred CeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCC-CccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEe
Q 010579 84 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPY-SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~-g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVAD 160 (507)
....|++++ ++.++++....+.|+.++...... ..+..+.+. -..++.|+++++|. ++++-
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----------------~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH----------------TAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC----------------SSCEEEEEECSSCTTEEEEE
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC----------------CCCeEEEEeCCCCCCEEEEE
Confidence 467899998 678999988899999999863210 111222111 13467899999886 78777
Q ss_pred CCCCeEEEEcCC--C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 161 TMNMAIRKISDT--G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 161 s~N~rIrk~d~~--G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
...+.|++++.. + +.++.+.. .....|++.+....++++-...++|+.+++..
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~-----------------~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHK-----------------DEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCS-----------------SCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCC-----------------CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 778889999943 2 45553211 12346665444446788877888899998865
No 186
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.22 E-value=2.6 Score=40.64 Aligned_cols=115 Identities=16% Similarity=0.154 Sum_probs=68.7
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..++++|+|.++++-...+.|+.++... ++.. .+.+. .....++++++|.++++-.
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~-----------------~~v~~~~~sp~~~~la~~~- 256 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAA---KKAMYTLSAQ-----------------DEVFSLAFSPNRYWLAAAT- 256 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTT---TEEEEEEECC-----------------SCEEEEEECSSSSEEEEEE-
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CcEEEEecCC-----------------CcEEEEEEcCCCCEEEEEc-
Confidence 456788999999888877888999998762 3222 22111 2356899999998655543
Q ss_pred CCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 163 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 163 N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
...|++++-+. +..+..... +. ..+.-.....+++ .++|..+++-...+.|+..++.
T Consensus 257 ~~~i~v~~~~~~~~~~~~~~~~~--------~~-~~~~~~~v~~~~~-spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 257 ATGIKVFSLDPQYLVDDLRPEFA--------GY-SKAAEPHAVSLAW-SADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TTEEEEEEETTEEEEEEECCCCT--------TC-CGGGCCCEEEEEE-CTTSSEEEEEETTSCEEEEEEE
T ss_pred CCCcEEEEeCcCeeeeccCcccc--------cc-ccCcCcceeEEEE-CCCCCEEEEeecCceEEEEEEe
Confidence 34467666443 233321110 00 0001112346775 6778777777778888888754
No 187
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.22 E-value=8 Score=37.06 Aligned_cols=75 Identities=11% Similarity=0.194 Sum_probs=54.5
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..+++.++|.++++-+..+.|+.++... ++. ..+.|.. .....|+++++|.++++=+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~---~~~~~~~~~h~----------------~~v~~~~~~~~~~~l~s~s~ 127 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVAT---GETYQRFVGHK----------------SDVMSVDIDKKASMIISGSR 127 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEECCS----------------SCEEEEEECTTSCEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCC---CCeeEEEccCC----------------CcEEEEEEcCCCCEEEEEeC
Confidence 345789999999888888889999999862 332 2333221 23467899999998888777
Q ss_pred CCeEEEEcCCC--cEEE
Q 010579 163 NMAIRKISDTG--VTTI 177 (507)
Q Consensus 163 N~rIrk~d~~G--VstI 177 (507)
.+.|+.++..+ +.++
T Consensus 128 D~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 128 DKTIKVWTIKGQCLATL 144 (319)
T ss_dssp TSCEEEEETTSCEEEEE
T ss_pred CCeEEEEECCCCeEEEE
Confidence 88899998665 4444
No 188
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.10 E-value=2.8 Score=42.25 Aligned_cols=121 Identities=12% Similarity=0.053 Sum_probs=74.6
Q ss_pred CeeEEEEcCC-CcEEEEeCCCCeEEEEeCCCCC--------CCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCC
Q 010579 84 EPFSVAVSPS-GELLVLDSENSNIYKISTSLSP--------YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 154 (507)
Q Consensus 84 ~P~gIaVd~d-G~LYVaDs~n~rI~ki~~~g~~--------~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG 154 (507)
.+..|++.++ +.++++-..++.|+.++..... ......+.+. -....+|++++++
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----------------QKEGYGLSWNPNL 193 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----------------SSCCCCEEECTTS
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----------------CCCeEEEEeCCCC
Confidence 5789999996 6788887888899999875210 0111122111 1245689999988
Q ss_pred C-EEEEeCCCCeEEEEcCCC----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 155 N-IYIADTMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 155 n-IYVADs~N~rIrk~d~~G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
. ++++-...+.|+.++... ...+.-... ....-....+|++.+.++.++++....+.|+.+++.
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----------~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNI-----------FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEE-----------ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceecccee-----------ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 7 777777788888888432 011100000 000111345677644477888888888889999887
Q ss_pred CC
Q 010579 230 DD 231 (507)
Q Consensus 230 ~~ 231 (507)
..
T Consensus 263 ~~ 264 (430)
T 2xyi_A 263 NN 264 (430)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 189
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.08 E-value=3.3 Score=40.08 Aligned_cols=110 Identities=9% Similarity=-0.016 Sum_probs=69.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
....++++++|.++++-...+.|+.++... +. +..+.+. -.....++++++| ++++-+.
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~----------------~~~i~~~~~~~~~-~l~~~~~ 308 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGN---GNSQNCFYGH----------------SQSIVSASWVGDD-KVISCSM 308 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSS---BSCSEEECCC----------------SSCEEEEEEETTT-EEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCC---CccceEecCC----------------CccEEEEEECCCC-EEEEEeC
Confidence 456788888888777777778888888652 22 2222111 1245689999998 7777777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
.+.|+.++.. + +.++.+.. .....+++ .+++.++++-..++.|+.+++...
T Consensus 309 d~~i~i~d~~~~~~~~~~~~~~-----------------~~i~~~~~-s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 309 DGSVRLWSLKQNTLLALSIVDG-----------------VPIFAGRI-SQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp TSEEEEEETTTTEEEEEEECTT-----------------CCEEEEEE-CTTSSEEEEEETTSCEEEEECHHH
T ss_pred CCcEEEEECCCCcEeEecccCC-----------------ccEEEEEE-cCCCCEEEEEECCCeEEEEECCCC
Confidence 8899999953 3 33332210 12345554 556666666666788888887653
No 190
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.92 E-value=1.8 Score=41.07 Aligned_cols=111 Identities=12% Similarity=0.032 Sum_probs=70.5
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc----cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEE
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR----PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYI 158 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~----i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYV 158 (507)
.-..++++++|.++++-...+.|+.++... +. ...+.+. -.....++++++|+ +++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~---~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~ 73 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDI---QAKNVDLLQSLRY----------------KHPLLCCNFIDNTDLQIY 73 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEET---TTTEEEEEEEEEC----------------SSCEEEEEEEESSSEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCC---CCccccceeeeec----------------CCceEEEEECCCCCcEEE
Confidence 456889999998777777778999988752 22 2222221 12456899999999 666
Q ss_pred EeCCCCeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 159 ADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 159 ADs~N~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
+=..++.|+.++. .+ ..++.+.. .-....++++.+ +.++++-...+.|+.+++..
T Consensus 74 ~~~~dg~i~~wd~~~~~~~~~~~~~~---------------~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGSPSFQALTNNE---------------ANLGICRICKYG--DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp EEETTSCEEEECSSSSSSEEECBSCC---------------CCSCEEEEEEET--TTEEEEEETTSEEEEECHHH
T ss_pred EEcCCCeEEEEEeccCCceEeccccC---------------CCCceEEEEeCC--CCEEEEEcCCCeEEEEcccc
Confidence 6566778999986 54 33332100 001234666554 56666666678898888765
No 191
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.58 E-value=5.6 Score=45.63 Aligned_cols=69 Identities=4% Similarity=0.036 Sum_probs=50.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..++++++|.++++-...+.|+.++... +.. ..+-+. -.....++++++|++.++=+.
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~---~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~~~ 677 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAET---GEKLLDIKAH----------------EDEVLCCAFSSDDSYIATCSA 677 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEEECCC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCC---CCEEEEeccC----------------CCCEEEEEEecCCCEEEEEeC
Confidence 456889999999888877888999999863 332 222211 124568999999998777777
Q ss_pred CCeEEEEcC
Q 010579 163 NMAIRKISD 171 (507)
Q Consensus 163 N~rIrk~d~ 171 (507)
++.|+++|.
T Consensus 678 d~~v~vwd~ 686 (1249)
T 3sfz_A 678 DKKVKIWDS 686 (1249)
T ss_dssp TSEEEEEET
T ss_pred CCeEEEEEC
Confidence 888999994
No 192
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.51 E-value=3.4 Score=40.29 Aligned_cols=116 Identities=8% Similarity=0.049 Sum_probs=73.7
Q ss_pred CeeEEEEcCCC-cEEEEeCCCC---eEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEE
Q 010579 84 EPFSVAVSPSG-ELLVLDSENS---NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 158 (507)
Q Consensus 84 ~P~gIaVd~dG-~LYVaDs~n~---rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYV 158 (507)
....++++++| .++++-...+ .|+.++..... .....+. .+ .-.....|++++ +|++++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~------~~---------~~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLN------QG---------HQKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCC------SC---------CSSCEEEEEECSSCSSCEE
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEee------cC---------ccCceeEEEeCCCCCCeEE
Confidence 46788999986 5666666666 88888875210 0011110 01 113467899998 888888
Q ss_pred EeCCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC-eEEEEeCCCCeEEEEECCCCce
Q 010579 159 ADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 159 ADs~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G-~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+-..++.|+.++.. + +.++.+.. ....++++ .+++ .++++-...+.|+.+++.....
T Consensus 280 s~~~dg~v~~wd~~~~~~~~~~~~~~-----------------~~v~~~~~-s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQLSQFPARG-----------------NWCFKTKF-APEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEESSSEEEEECSSSCCEEEEEECSS-----------------SCCCCEEE-CTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred EEeCCCCEEEeeCCCCccceeecCCC-----------------CceEEEEE-CCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 77778899999943 3 44443211 12346675 4555 7888888889999999876543
No 193
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.46 E-value=14 Score=36.25 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=48.8
Q ss_pred CeeEEEEcCCC-cEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEEEeC
Q 010579 84 EPFSVAVSPSG-ELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG-~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYVADs 161 (507)
.-..+++.++| .++++-+..+.|+.++... ++........ . .-..+..+++.++ ++++++=+
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~----~---------~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRC---PKPASQIGCS----A---------PGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTS---SSCEEECC-----------------CCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEecCCCCCceeeeccccccccccccc---cceeeeeecc----e---------eeccceeeeecCCCCcceEEec
Confidence 34678888876 4777777778888888752 3322221110 0 1123567888874 56877766
Q ss_pred CCCeEEEEcCC-C--cEEEec
Q 010579 162 MNMAIRKISDT-G--VTTIAG 179 (507)
Q Consensus 162 ~N~rIrk~d~~-G--VstIaG 179 (507)
.++.|+.+|.. + +.++.+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp TTSEEEEEESCC--CCEEEEC
T ss_pred cCCcEEEEECCCCcEEEEEcC
Confidence 78889999843 3 555543
No 194
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=90.35 E-value=8.7 Score=40.14 Aligned_cols=114 Identities=9% Similarity=-0.029 Sum_probs=63.7
Q ss_pred eEEEEcCCCcEEEE---eCCC-CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEe
Q 010579 86 FSVAVSPSGELLVL---DSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 160 (507)
Q Consensus 86 ~gIaVd~dG~LYVa---Ds~n-~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVAD 160 (507)
..++++|||..++. |..+ ..|++++..+ +....+.+.. .....++++|||. |+.++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~---g~~~~l~~~~----------------~~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS---GGLRVFDSGE----------------GSFSSASISPGMKVTAGLE 213 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTT---CCCEEECCSS----------------CEEEEEEECTTSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC---CCceEeecCC----------------CccccceECCCCCEEEEcc
Confidence 68899999985552 2222 6799999763 4555543321 1236899999998 55444
Q ss_pred CCC-CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEEC
Q 010579 161 TMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 228 (507)
Q Consensus 161 s~N-~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l 228 (507)
... .+|+++|.++ .. +..+.. +......-..+...++ +++|.|+++-..++.++.+..
T Consensus 214 ~~~~~~i~~~d~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~-spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE-DLELPS--------KDFSSYRPTAITWLGY-LPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSSCEEEEEECTTTCCEE-ECCCSC--------SHHHHHCCSEEEEEEE-CTTSCEEEEEEETTEEEEEET
T ss_pred CCCeeEEEEEcCCCCcEE-EccCCC--------cChhhhhhccccceeE-cCCCcEEEEEEcCCcEEEEEE
Confidence 432 3899999554 33 321110 0000000001112223 566688777766777877777
No 195
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.28 E-value=14 Score=36.06 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=43.6
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEEEeC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYVADs 161 (507)
.-..|++.+++. ++++-..++.|+.++... ++.....-. ...-..+..|++.++ ++++++=.
T Consensus 183 ~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~---~~~~~~~~~-------------~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 183 EVNCVAACPGKDTIFLSCGEDGRILLWDTRK---PKPATRIDF-------------CASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp CEEEEEECTTCSSCEEEEETTSCEEECCTTS---SSCBCBCCC-------------TTCCSCEEEEEECTTSTTEEEEEE
T ss_pred CEEEEEEccCCCceeeeeccCCceEEEECCC---Cceeeeeee-------------ccccccccchhhhhcccceEEEee
Confidence 345677777653 666666667777776542 111100000 001124568899886 45666655
Q ss_pred CCCeEEEEcCC-C--cEEEe
Q 010579 162 MNMAIRKISDT-G--VTTIA 178 (507)
Q Consensus 162 ~N~rIrk~d~~-G--VstIa 178 (507)
.++.|+.+|.. + +.++.
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp SSSCEEEEESSCGGGCEEEC
T ss_pred cccceeEEECCCCcEeEEEe
Confidence 67789998843 3 45553
No 196
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.09 E-value=5.3 Score=37.02 Aligned_cols=115 Identities=9% Similarity=0.049 Sum_probs=68.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCC-c-cEEEecCCCCccccCCCCcccccCCCcceEEEcC--CCCEEEE
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYS-R-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIA 159 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g-~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~--dGnIYVA 159 (507)
.-..|+++++|.++++-...+.|+.++....... + ...+.+. -.....|++.+ +|+++++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH----------------DSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC----------------SSCEEEEEECCGGGCSEEEE
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC----------------CCcEEEEEEcCCCCCCEEEE
Confidence 3568999999998888777889999987631100 1 1111111 12356788887 5887776
Q ss_pred eCCCCeEEEEcCCC------------cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCC--CeEEEEeCCCCeEEE
Q 010579 160 DTMNMAIRKISDTG------------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS--CSLLVIDRGNQAIRE 225 (507)
Q Consensus 160 Ds~N~rIrk~d~~G------------VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~--G~LyVaD~gn~rIr~ 225 (507)
=+..+.|+.++... +.++.+. -....++++ .++ +.++++-..++.|+.
T Consensus 77 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~-~~~~~~~~l~~~~~dg~v~i 138 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS-----------------KGSLYSVKF-APAHLGLKLACLGNDGILRL 138 (351)
T ss_dssp EETTSCEEEEEECTTSCTTSSCSEEEEEEECCC-----------------SSCEEEEEE-CCGGGCSEEEEEETTCEEEE
T ss_pred EcCCCeEEEEecCCCcccccccCcceeeeeccc-----------------CCceeEEEE-cCCCCCcEEEEecCCCcEEE
Confidence 66677788877322 1222110 112345654 444 666666566778888
Q ss_pred EECCCCc
Q 010579 226 IQLHDDD 232 (507)
Q Consensus 226 I~l~~~~ 232 (507)
+++....
T Consensus 139 wd~~~~~ 145 (351)
T 3f3f_A 139 YDALEPS 145 (351)
T ss_dssp EECSSTT
T ss_pred ecCCChH
Confidence 8876544
No 197
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=90.06 E-value=8.1 Score=41.49 Aligned_cols=71 Identities=11% Similarity=0.102 Sum_probs=52.7
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|+++++|.++++-+..+.|+.++... +.. ..+.+. -.....|+++++|+.+++=+.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~---~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAA---GVSTRRFVGH----------------TKDVLSVAFSLDNRQIVSASR 492 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEECC----------------SSCEEEEEECTTSSCEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCC---CcceeEEeCC----------------CCCEEEEEEeCCCCEEEEEeC
Confidence 356899999999999888889999999862 322 223222 123468999999998887777
Q ss_pred CCeEEEEcCCC
Q 010579 163 NMAIRKISDTG 173 (507)
Q Consensus 163 N~rIrk~d~~G 173 (507)
.+.|+..+..+
T Consensus 493 D~~i~iwd~~~ 503 (694)
T 3dm0_A 493 DRTIKLWNTLG 503 (694)
T ss_dssp TSCEEEECTTS
T ss_pred CCEEEEEECCC
Confidence 88899999655
No 198
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=89.99 E-value=5 Score=39.28 Aligned_cols=112 Identities=12% Similarity=0.129 Sum_probs=71.7
Q ss_pred EEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeEE
Q 010579 88 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIR 167 (507)
Q Consensus 88 IaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rIr 167 (507)
.++.++|+++++-..++.|+.++... +....... + .-.....|+++++|+++++=+.++.|+
T Consensus 103 ~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~------~---------h~~~v~~~~~~~~~~~l~s~s~d~~i~ 164 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTEGDIKVLDSNF---NLQREIDQ------A---------HVSEITKLKFFPSGEALISSSQDMQLK 164 (420)
T ss_dssp EEECSSSCEEEEEETTSCEEEECTTS---CEEEEETT------S---------SSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEecCCCEEEEEECCCCEEEEeCCC---cceeeecc------c---------ccCccEEEEECCCCCEEEEEeCCCeEE
Confidence 35677888888877788999998762 33322210 1 123456899999999777777788899
Q ss_pred EEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee
Q 010579 168 KISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 235 (507)
Q Consensus 168 k~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~ 235 (507)
.++.. + +.++.+-. ....++++ .+++.++++-...+.|+.+++....+..
T Consensus 165 iwd~~~~~~~~~~~~h~-----------------~~v~~~~~-~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 165 IWSVKDGSNPRTLIGHR-----------------ATVTDIAI-IDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp EEETTTCCCCEEEECCS-----------------SCEEEEEE-ETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEeCCCCcCceEEcCCC-----------------CcEEEEEE-cCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 99943 3 45553211 12345665 4455555565567788888887665543
No 199
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=89.93 E-value=13 Score=35.12 Aligned_cols=112 Identities=8% Similarity=0.055 Sum_probs=72.8
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
-..+++.++|+++++-+..+.|+.++... ++. ..+.+. -..-..|++.+++.++++=+..
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~---~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~sgs~D 118 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNT---GEKVVDFEAH----------------PDYIRSIAVHPTKPYVLSGSDD 118 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTT---CCEEEEEECC----------------SSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCC---CcEEEEEeCC----------------CCcEEEEEEcCCCCEEEEECCC
Confidence 34778889999888888889999999863 332 223222 1235689999999988887778
Q ss_pred CeEEEEcC-CC--c-EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 164 MAIRKISD-TG--V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 164 ~rIrk~d~-~G--V-stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
+.|+.+|. .+ + .++.+.. ..-..+++.+.++.++++-...+.|+..++....
T Consensus 119 ~~v~lWd~~~~~~~~~~~~~h~-----------------~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 119 LTVKLWNWENNWALEQTFEGHE-----------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp SCEEEEEGGGTTEEEEEECCCC-----------------SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CeEEEEECCCCcchhhhhcccC-----------------CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 88999883 33 2 2332110 1224556544466666666667788888876543
No 200
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.85 E-value=15 Score=39.43 Aligned_cols=69 Identities=6% Similarity=0.026 Sum_probs=48.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..++++++|.++++-...+.|+.++... +.. ..+.+. -.....++++++|..+++-+.
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~ 117 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNT---GEKVVDFEAH----------------PDYIRSIAVHPTKPYVLSGSD 117 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTT---CCEEEEEECC----------------SSCEEEEEECSSSSEEEEEET
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCC---CcEEEEEecC----------------CCCEEEEEEeCCCCEEEEEcC
Confidence 456899999998777777789999999762 332 222221 124668999999986666556
Q ss_pred CCeEEEEcC
Q 010579 163 NMAIRKISD 171 (507)
Q Consensus 163 N~rIrk~d~ 171 (507)
++.|+.++.
T Consensus 118 dg~i~vw~~ 126 (814)
T 3mkq_A 118 DLTVKLWNW 126 (814)
T ss_dssp TSEEEEEEG
T ss_pred CCEEEEEEC
Confidence 778888883
No 201
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.76 E-value=15 Score=36.26 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=64.2
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs 161 (507)
...+++++++|.++++-...+.|+.++... +... .+.+. -.....|++.++|. ++++-.
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---~~~~~~~~~~----------------~~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARS---SIPKFTKTNH----------------NAAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTC---SSEEEEECCC----------------SSCCCEEEECTTSTTEEEEEC
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCC---CCccEEecCC----------------cceEEEEEECCCCCCEEEEec
Confidence 456778888887777766677888888752 2222 11111 12456899999764 666644
Q ss_pred --CCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEE--eCCCCeEEEEECCCC
Q 010579 162 --MNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVI--DRGNQAIREIQLHDD 231 (507)
Q Consensus 162 --~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVa--D~gn~rIr~I~l~~~ 231 (507)
.++.|+.+|.. + +.++..+ .....+++ .+++..+++ ...++.|+.++....
T Consensus 280 gs~d~~i~i~d~~~~~~~~~~~~~------------------~~v~~~~~-s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 280 GTMDKQIHFWNAATGARVNTVDAG------------------SQVTSLIW-SPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp CTTTCEEEEEETTTCCEEEEEECS------------------SCEEEEEE-CSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred CCCCCEEEEEECCCCCEEEEEeCC------------------CcEEEEEE-CCCCCeEEEEeecCCCcEEEEecCCc
Confidence 57889999943 3 3333211 02345554 444444444 335677777776653
No 202
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.51 E-value=4.6 Score=39.30 Aligned_cols=124 Identities=10% Similarity=0.034 Sum_probs=74.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCC--ccEEEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEEEe
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYS--RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g--~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYVAD 160 (507)
....|+++++|.++++-..++.|+.++......+ .+..+.+. -.....|+++++ ++++++=
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNH----------------SSSVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCS----------------SSCCCEEEECSSSTTBEEEE
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCC----------------ccceEEEEEcCCCCCEEEEE
Confidence 4668999999987777777789999987631111 11111111 124568999998 7777777
Q ss_pred CCCCeEEEEcCCC-c------EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 161 TMNMAIRKISDTG-V------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 161 s~N~rIrk~d~~G-V------stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
..++.|+.++... - ..+.-.. ....-....++++.++.+.++++-...+.|+.+++....+
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~------------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 200 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTPGQ------------SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE 200 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCCCC------------SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE
T ss_pred cCCCeEEEEECCCCcccccccccccccc------------ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc
Confidence 7778899888443 1 1110000 0011123456765433367777777778888888877655
Q ss_pred ee
Q 010579 234 SD 235 (507)
Q Consensus 234 ~~ 235 (507)
..
T Consensus 201 ~~ 202 (416)
T 2pm9_A 201 VI 202 (416)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 203
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=89.50 E-value=3 Score=40.67 Aligned_cols=112 Identities=19% Similarity=0.198 Sum_probs=68.3
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE--EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK--LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~--~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
-..|+++|+|.++++-...+.|+.++..+ +... .... .|+ -..-..|+++++|+++++=+.
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~---~~~~~~~~~~-----~~h---------~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEG---DSWICKSVLS-----EGH---------QRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEET---TEEEEEEEEC-----SSC---------SSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCC---Ccceeeeeec-----ccc---------CCcEEEEEECCCCCEEEEEEC
Confidence 46899999999888888888999998752 2211 1110 111 123468999999997777666
Q ss_pred CCeEEEEcC--CC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 163 NMAIRKISD--TG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 163 N~rIrk~d~--~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
.+.|+..+. .. +.++.+-. ..-.+|++ .++++++++-...+.|+..++...
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~-----------------~~v~~v~~-sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHE-----------------NEVKSVAW-APSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCS-----------------SCEEEEEE-CTTSSEEEEEETTSCEEEEEECTT
T ss_pred CCcEEEEEccCCCeEEEEEccCCC-----------------CCceEEEE-eCCCCEEEEEECCCeEEEEECCCC
Confidence 666777662 22 22332110 12345554 556666666666677777776543
No 204
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=89.47 E-value=12 Score=39.65 Aligned_cols=139 Identities=13% Similarity=0.013 Sum_probs=79.1
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCC-CCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSP-EGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~-~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|+++|+|.++++-+..+.|+.++... +......... ....++ -....+|+++++|.++++=+.
T Consensus 192 ~V~~v~fspdg~~las~s~D~~i~lwd~~~---g~~~~~~~~~~~~~~~h---------~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVD---GTKTGVFEDDSLKNVAH---------SGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEECBCTTSSSCSS---------SSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEECCCcEEEEECCC---CcEeeeecccccccccc---------CCCEEEEEECCCCCEEEEEeC
Confidence 456889999999888888888999998652 3322221110 000011 234678999999998888777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccC-------------CCCCCCCCc---------c----CccCCCCceEEEEcCCCeE
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSR-------------GVGHVDGPS---------E----DAKFSNDFDVVYVGSSCSL 213 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~-------------~~G~~dg~~---------~----~a~f~~P~gIa~vd~~G~L 213 (507)
.+.|+..|.. + +.++..+.... ..+..|+.. . ...-..-.++++ .+++..
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~-spdg~~ 338 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSS-SADGKT 338 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEE-CTTSSE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEE-eCCCCE
Confidence 8889999843 3 33332210000 000001100 0 001122345664 556666
Q ss_pred EEEeCCCCeEEEEECCCCceee
Q 010579 214 LVIDRGNQAIREIQLHDDDCSD 235 (507)
Q Consensus 214 yVaD~gn~rIr~I~l~~~~~~~ 235 (507)
+++-...+.|+..++....+..
T Consensus 339 l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEeCCCcEEEEECCCCceee
Confidence 6666667888888887766654
No 205
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.24 E-value=16 Score=35.07 Aligned_cols=116 Identities=8% Similarity=-0.007 Sum_probs=73.9
Q ss_pred CeeEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 84 EPFSVAVSP--SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~--dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
.-..+++++ +|+++++-+..+.|+.++... +....+.... .-.....++++++|.++++=+
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~---~~~~~~~~~~--------------~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYED---DSQYIVHSAK--------------SDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSS---SCEEEEECCC--------------SSCCCCEEEECTTSCEEEEEC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC---CcEEEEEecC--------------CCCceEEEEECCCCCEEEEEc
Confidence 367889999 999988888889999999862 3332222110 011356899999999888867
Q ss_pred CCCeEEEEcCC-C--c-EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 162 MNMAIRKISDT-G--V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 162 ~N~rIrk~d~~-G--V-stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
.++.|+.+|.. + + .++.++. -.....|++ .+++.++++-..+ .|+.+++....+.
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h----------------~~~v~~l~f-s~~g~~l~s~~~~-~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDE----------------EAKIKEVKF-ADNGYWMVVECDQ-TVVCFDLRKDVGT 248 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCT----------------TSCEEEEEE-CTTSSEEEEEESS-BEEEEETTSSTTC
T ss_pred CCCEEEEEECCCCCCCccEEeccC----------------CCCEEEEEE-eCCCCEEEEEeCC-eEEEEEcCCCCcc
Confidence 78889999943 3 3 3332200 013356775 4555544444333 9999999876654
No 206
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=89.10 E-value=6.7 Score=38.61 Aligned_cols=141 Identities=12% Similarity=0.138 Sum_probs=76.3
Q ss_pred CeeEEEEcCCC-cEEEEeCCCCeEEEEeCCCCCC--CccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEe
Q 010579 84 EPFSVAVSPSG-ELLVLDSENSNIYKISTSLSPY--SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~dG-~LYVaDs~n~rI~ki~~~g~~~--g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVAD 160 (507)
....++++|+| +++++-+..+.|+.++...... ..+.++-+.... . ..............|+++++|.++++-
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDP--S--NRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCc--c--ccccccccCceEEEEEECCCCCEEEEe
Confidence 46789999998 8888888889999999763210 002333222100 0 000000011245689999999977765
Q ss_pred CCCCeEEEEcCC--C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 161 TMNMAIRKISDT--G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 161 s~N~rIrk~d~~--G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
.. +.|+.+|.. + +.++.+....... .........+.....+++ .+++..+++-..++.|+.+++....
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~i~~~~~~~~-s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVHEYLRSK--LCSLYENDCIFDKFECCW-NGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESCGGGTTT--HHHHHHTSGGGCCCCEEE-CTTSSEEEEECSTTEEEEEETTTCC
T ss_pred eC-CeEEEEeCCCCccccceeecccccccc--ccccccccccccceEEEE-CCCCCEEEEeccCCEEEEEEcCCCc
Confidence 55 889999843 4 4444332110000 000000011112234664 5666666777778888888876543
No 207
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.93 E-value=2.1 Score=41.50 Aligned_cols=132 Identities=11% Similarity=-0.034 Sum_probs=70.3
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC-CccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPY-SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~-g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
....++++++|.++++-...+.|+.++...... .....+.+. .-.....|+++++|+++++-+.
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP---------------LRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS---------------CCSCEEEEEECTTSSEEEEEES
T ss_pred ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc---------------cCCCeEEEEEcCCCCEEEEEeC
Confidence 466888888888777766778888888752110 012222210 1124568999999997777666
Q ss_pred CCeEEEEcCC--CcEEE-ecCcccCCCCCCCC-Ccc-CccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 163 NMAIRKISDT--GVTTI-AGGKWSRGVGHVDG-PSE-DAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 163 N~rIrk~d~~--GVstI-aGG~~g~~~G~~dg-~~~-~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.+.|+.++.. .+..- .....+. ....+ ... -..-.....+++ .+++.++++-..++.|+.+++....+
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~-sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGS--RLPFNTVCAEYPSGGWVHAVGF-SPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCS--CCCEEEEEECCCCSSSEEEEEE-CTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred CCEEEEEEEEecccCCCcccccccc--ccchhhhhhcccCCceEEEEEE-CCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 7778888842 11000 0000000 00000 000 001112356664 56777666666778999999887765
No 208
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.92 E-value=11 Score=37.75 Aligned_cols=126 Identities=9% Similarity=0.014 Sum_probs=72.9
Q ss_pred CeeEEEEcCC---CcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEE
Q 010579 84 EPFSVAVSPS---GELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 159 (507)
Q Consensus 84 ~P~gIaVd~d---G~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVA 159 (507)
....|+++++ |.++++-...+.|+.++... +.. ..+.. |+ -.....|+++ +|.++++
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~---~~~~~~~~~------~h---------~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ---CFIVDKWLF------GH---------KHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEESC---TTCEEEECC------CC---------SSCEEEEEEC-STTEEEE
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC---Cceeeeeec------CC---------CCceEEEEEC-CCCEEEE
Confidence 4678899998 87777767778999998752 222 22110 11 1346789999 9988887
Q ss_pred eCCCCeEEEEcC-CC--cEEEecCcccCCCC---CCC-----CCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEEC
Q 010579 160 DTMNMAIRKISD-TG--VTTIAGGKWSRGVG---HVD-----GPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 228 (507)
Q Consensus 160 Ds~N~rIrk~d~-~G--VstIaGG~~g~~~G---~~d-----g~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l 228 (507)
-+..+.|+.+|. .+ +.++.........- ... .......-....+|++.++...|+++....+.|+.+++
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 778889999994 34 44443211000000 000 00000011223567765555567777767889999988
No 209
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.89 E-value=15 Score=34.45 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=72.5
Q ss_pred CeeEEEEcCC----CcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEE
Q 010579 84 EPFSVAVSPS----GELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIY 157 (507)
Q Consensus 84 ~P~gIaVd~d----G~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIY 157 (507)
.-..+++.++ |.++++-..++.|+.++... ++. ..+.+. -.....|++++ +++++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~---~~~~~~~~~~----------------~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT---MQCIKHYVGH----------------GNAINELKFHPRDPNLL 131 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT---CCEEEEEESC----------------CSCEEEEEECSSCTTEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh---ceEeeeecCC----------------CCcEEEEEECCCCCCEE
Confidence 4568888887 66777777789999999762 322 222221 12456899999 88877
Q ss_pred EEeCCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 158 IADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 158 VADs~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
++=...+.|+.++.. + +.++..-. ..-....++++ .+++.++++-..++.|+.+++..
T Consensus 132 ~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~~v~~~~~-~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 132 LSVSKDHALRLWNIQTDTLVAIFGGVE--------------GHRDEVLSADY-DLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECSTT--------------SCSSCEEEEEE-CTTSSEEEEEETTSCEEEEESCS
T ss_pred EEEeCCCeEEEEEeecCeEEEEecccc--------------cccCceeEEEE-CCCCCEEEEecCCCCEEEEECCC
Confidence 777778889999944 3 33331100 00123456665 55666666666678899998764
No 210
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.56 E-value=5.8 Score=43.41 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=72.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
....|+.|++|+|||+...++.|.++++. .+++..+... +.. .-+.+..|+.|.+|+|||+-.
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~---~~~~~~~~~~--~~~----------~~~~~~~i~~d~~g~lWigt~-- 535 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKINPR---TREVTKLFAD--ELT----------GEKSPNYLLCDEDGLLWVGFH-- 535 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEETT---TTEEEEECTT--TSC----------GGGCEEEEEECTTSCEEEEET--
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEeCC---CCceEEecCC--CcC----------CCcccceEEECCCCCEEEEec--
Confidence 46778999999999944445679999986 3444444211 000 013567899999999999963
Q ss_pred CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 164 MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 164 ~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
.-|.+++... +..+. .++... +...+|+ . ++|+|||.. ++-|.++++....+.
T Consensus 536 ~Gl~~~~~~~~~~~~~~----------~~gl~~----~~i~~i~-~-~~g~lWi~t--~~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 536 GGVMRINPKDESQQSIS----------FGSFSN----NEILSMT-C-VKNSIWVST--TNGLWIIDRKTMDAR 590 (758)
T ss_dssp TEEEEECC--CCCCBCC----------CCC-------CCEEEEE-E-ETTEEEEEE--SSCEEEEETTTCCEE
T ss_pred CceEEEecCCCceEEec----------ccCCCc----cceEEEE-E-CCCCEEEEC--CCCeEEEcCCCceeE
Confidence 4699999644 22221 011111 2345554 3 489999998 456899998876554
No 211
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=88.36 E-value=7.5 Score=41.69 Aligned_cols=69 Identities=10% Similarity=0.110 Sum_probs=42.1
Q ss_pred eeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC
Q 010579 85 PFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 162 (507)
Q Consensus 85 P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~ 162 (507)
...++++|||. |+++.. +.|+.++..+.....+..+.+. -..+..++++|||+ |+++.
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~----------------~~~~~~~~~SPDG~~la~~~-- 170 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG----------------EGFATDAKLSPKGGFVSFIR-- 170 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS----------------SSCEEEEEECTTSSEEEEEE--
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC----------------CcccccccCCCCCCEEEEEe--
Confidence 35789999998 444443 8999999873200022221111 12466899999998 44444
Q ss_pred CCeEEEEcCCC
Q 010579 163 NMAIRKISDTG 173 (507)
Q Consensus 163 N~rIrk~d~~G 173 (507)
++.|++++.++
T Consensus 171 ~~~i~~~d~~~ 181 (741)
T 2ecf_A 171 GRNLWVIDLAS 181 (741)
T ss_dssp TTEEEEEETTT
T ss_pred CCcEEEEecCC
Confidence 34788888544
No 212
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=88.35 E-value=17 Score=34.12 Aligned_cols=114 Identities=18% Similarity=0.191 Sum_probs=73.9
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..++++++|+++++-...+.|+.++... ++. ..+-+. -.....++++++|+++++=..
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~---~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~s~~~ 127 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSS---GKCLKTLKGH----------------SNYVFCCNFNPQSNLIVSGSF 127 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---CCEEEEEECC----------------SSCEEEEEECSSSSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCC---CcEEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeC
Confidence 456899999999888888889999999762 322 222221 123457889999998887777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
++.|+.+|.. + +.++.+.. ..-..+++ .+++.++++-...+.|+.+++....+.
T Consensus 128 d~~i~iwd~~~~~~~~~~~~~~-----------------~~v~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 128 DESVRIWDVKTGKCLKTLPAHS-----------------DPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----------------SCEEEEEE-CTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCcEEEEECCCCEEEEEecCCC-----------------CcEEEEEE-cCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 8889999843 3 33332110 01234443 556666666666777888887765543
No 213
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.27 E-value=31 Score=37.07 Aligned_cols=114 Identities=11% Similarity=0.055 Sum_probs=67.4
Q ss_pred CeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC--CCCEEEEe
Q 010579 84 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~--dGnIYVAD 160 (507)
....++++| +|.++++-+..+.|+.++..... ....+.+.. -.....+++.+ +|.++++-
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~---------------~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST--PNFTLTTGQ---------------ERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETTCSS--CSEEEECCC---------------TTCCCEEEECCSTTCCEEEEE
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--ceeEEecCC---------------CCCEEEEEEEECCCCCEEEEE
Confidence 467888998 78788877778899999875211 112222110 12345788887 88888877
Q ss_pred CCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 161 TMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 161 s~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
..++.|+.++.. + +.++.+.. .....+++ .+++.++++-...+.|+.+++....
T Consensus 205 ~~dg~i~~~d~~~~~~~~~~~~~~-----------------~~v~~~~~-~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 205 SDDLTIKIWDYQTKSCVATLEGHM-----------------SNVSFAVF-HPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCS-----------------SCEEEEEE-CSSSSEEEEEETTSCEEEEETTTCS
T ss_pred eCCCEEEEEECCCCcEEEEEcCCC-----------------CCEEEEEE-cCCCCEEEEEeCCCeEEEEECCCCc
Confidence 778899999843 3 34443211 11234443 4455555554455666666665544
No 214
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=87.91 E-value=8.7 Score=36.31 Aligned_cols=113 Identities=9% Similarity=0.078 Sum_probs=65.9
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC--CCCEEEEeCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIADTM 162 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~--dGnIYVADs~ 162 (507)
=..++++++|.++++-+..+.|+.++..+.....+.++.|.. ..-..|++.+ +|+++++=+.
T Consensus 12 V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~----------------~~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHE----------------GPVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCS----------------SCEEEEEECCGGGCSEEEEEET
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcccc----------------CCeEEEEecCCCcCCEEEEEcC
Confidence 357899999999888888899999987521111123332221 1234677754 4787777667
Q ss_pred CCeEEEEcCC-C----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcC-CCeEEEEeCCCCeEEEEECCC
Q 010579 163 NMAIRKISDT-G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 163 N~rIrk~d~~-G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~-~G~LyVaD~gn~rIr~I~l~~ 230 (507)
.+.|+..+.. + +.++.+.. ..-..|++.+. .+.++++-...+.|+.+++..
T Consensus 76 D~~v~iWd~~~~~~~~~~~~~~h~-----------------~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAVHAVHS-----------------ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEEECCCS-----------------SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred CCEEEEEEcCCCceEEEEEeecCC-----------------CceeEEEeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 7788888743 2 22221100 01234554322 155566656667788887754
No 215
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.76 E-value=11 Score=40.40 Aligned_cols=85 Identities=11% Similarity=0.118 Sum_probs=45.2
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCC-----eEEEEeCCCCCCCccEEEecCCCCcc-c---cCCCCccc--ccC---CCcce
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENS-----NIYKISTSLSPYSRPKLVAGSPEGYY-G---HVDGRPRG--ARM---NHPKG 147 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~-----rI~ki~~~g~~~g~i~~vaG~~~G~~-G---~~dG~~~~--a~f---n~P~G 147 (507)
..+..++++|||. |+++....+ .|+.++..+ +....+........ | ..++.... .++ .....
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS---GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT---CCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC---CceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 3578999999997 455444234 899999873 44433332110000 0 00000000 000 12467
Q ss_pred EEEcCCCC-EEEEeCCCCeEEEEcCC
Q 010579 148 LAVDDRGN-IYIADTMNMAIRKISDT 172 (507)
Q Consensus 148 IaVd~dGn-IYVADs~N~rIrk~d~~ 172 (507)
+++++||. |+++.. ..|+.++.+
T Consensus 114 ~~~SpDg~~l~~~~~--~~i~~~d~~ 137 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG--GELYLYDLK 137 (741)
T ss_dssp CEECTTSSEEEEEET--TEEEEEESS
T ss_pred eEECCCCCEEEEEeC--CcEEEEECC
Confidence 89999998 555553 778888844
No 216
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=87.41 E-value=16 Score=34.98 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=49.1
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..+++.++|. ++++-...+.|+.++..... ..+..+-... +......-......-.....++++++|+.+++-..
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITLDQHN-GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEECCTTT-TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-cccccccccc-cccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 456788888876 67676677888888875221 1122221110 00000000000112234678999999997777667
Q ss_pred CCeEEEEcCC
Q 010579 163 NMAIRKISDT 172 (507)
Q Consensus 163 N~rIrk~d~~ 172 (507)
++.|+.++..
T Consensus 266 dg~i~vwd~~ 275 (408)
T 4a11_B 266 DNRMRLWNSS 275 (408)
T ss_dssp TSCEEEEETT
T ss_pred CCeEEEEECC
Confidence 7889999843
No 217
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=87.39 E-value=3.3 Score=43.98 Aligned_cols=117 Identities=12% Similarity=0.106 Sum_probs=61.5
Q ss_pred CeeEEEEcCCCc-EEEEeCC---------CCeEEEEeCCCCC---CCccEEEe-cCCCCccccCCCCcccccCCCcceEE
Q 010579 84 EPFSVAVSPSGE-LLVLDSE---------NSNIYKISTSLSP---YSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLA 149 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~---------n~rI~ki~~~g~~---~g~i~~va-G~~~G~~G~~dG~~~~a~fn~P~GIa 149 (507)
...+++++|||. |+++... ...|++++.++.. .+....+. ... ....+++
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~~~~ 194 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH----------------RFVTGPR 194 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS----------------SEECCCE
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC----------------CcccCce
Confidence 456889999997 4443321 2588899886310 02333332 110 1234678
Q ss_pred EcCCCC-EEEEeCC-------CCeEEEEcCC--C----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEE
Q 010579 150 VDDRGN-IYIADTM-------NMAIRKISDT--G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 215 (507)
Q Consensus 150 Vd~dGn-IYVADs~-------N~rIrk~d~~--G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyV 215 (507)
+++||. |+++... ...|+.++.+ | ...+..+.. .....+++ .++|.||+
T Consensus 195 ~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~----------------~~~~~~~~-spdg~l~~ 257 (662)
T 3azo_A 195 LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE----------------EAIAQAEW-APDGSLIV 257 (662)
T ss_dssp ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT----------------BCEEEEEE-CTTSCEEE
T ss_pred ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC----------------ceEcceEE-CCCCeEEE
Confidence 999997 5544422 2478888733 4 233322110 12334554 44555655
Q ss_pred EeCCCC--eEEEEECCCCce
Q 010579 216 IDRGNQ--AIREIQLHDDDC 233 (507)
Q Consensus 216 aD~gn~--rIr~I~l~~~~~ 233 (507)
+...++ +|+++++.+..+
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 258 ATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp EECTTSSCEEEEECTTTCCE
T ss_pred EECCCCCeEEEEEECCCCce
Confidence 544334 777777655443
No 218
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=87.32 E-value=2.4 Score=42.03 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=51.0
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
-..|+++|||.++++-+..+.|+.++.. .++.. .+. .|+ -...+.|+++|||.++++=+..
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~---~~~~~~~~~------~gH---------~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLK---DLSMSKIFK------QAH---------SFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETT---TTEEEEEET------TSS---------SSCEEEEEECTTSCEEEEEETT
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECC---CCcEEEEec------Ccc---------cCCEEEEEECCCCCEEEEEeCC
Confidence 4678999999998888888899999976 23322 221 111 1245799999999999988888
Q ss_pred CeEEEEc
Q 010579 164 MAIRKIS 170 (507)
Q Consensus 164 ~rIrk~d 170 (507)
+.||+++
T Consensus 334 ~tvrvw~ 340 (365)
T 4h5i_A 334 NTIHIIK 340 (365)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 8899988
No 219
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=87.17 E-value=20 Score=33.69 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=52.9
Q ss_pred CeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|++.+ +++++++-...+.|+.++... +......... .+ .-.....|+++++|+.+++=..
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~---~~---------~~~~v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQT---DTLVAIFGGV---EG---------HRDEVLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTT---TEEEEEECST---TS---------CSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeec---CeEEEEeccc---cc---------ccCceeEEEECCCCCEEEEecC
Confidence 567899999 888888877889999999862 3333332110 01 1235678999999997777777
Q ss_pred CCeEEEEcCCC
Q 010579 163 NMAIRKISDTG 173 (507)
Q Consensus 163 N~rIrk~d~~G 173 (507)
++.|+.++...
T Consensus 182 dg~i~i~d~~~ 192 (366)
T 3k26_A 182 DHSLKLWRINS 192 (366)
T ss_dssp TSCEEEEESCS
T ss_pred CCCEEEEECCC
Confidence 88899998543
No 220
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=86.62 E-value=16 Score=35.74 Aligned_cols=125 Identities=11% Similarity=-0.008 Sum_probs=73.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCe-EEEEeCCCCCCCcc-EEEe-cCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEe
Q 010579 84 EPFSVAVSPSGELLVLDSENSN-IYKISTSLSPYSRP-KLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~r-I~ki~~~g~~~g~i-~~va-G~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVAD 160 (507)
.-..|+++|+|.++++-+..+. |+.++... ++. ..+. |.. -.....|+++++|+++++-
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~---~~~~~~~~~g~h---------------~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTED---GVLVREFRRGLD---------------RADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTT---CCEEEEEECTTC---------------CSCEEEEEECTTSCEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCC---CcEEEEEEcCCC---------------CCcEEEEEECCCCCEEEEE
Confidence 4578999999999988888887 99999862 332 2332 200 1245689999999988887
Q ss_pred CCCCeEEEEcCCC-----cEEEecCcccCCCCCCCCCc--cCccCC----CCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 161 TMNMAIRKISDTG-----VTTIAGGKWSRGVGHVDGPS--EDAKFS----NDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 161 s~N~rIrk~d~~G-----VstIaGG~~g~~~G~~dg~~--~~a~f~----~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
+..+.|+.++-.. ...+.+-.. ..+.+..- ....+. .+..++...+++..+++-..++++++++..
T Consensus 259 s~d~~v~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDNKRHALKGWIN---MKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp ETTCEEEEEESSCCSCCCSEETTTTEE---CCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred ECCCEEEEEEccCCCCcccccccceee---ccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 7788899988321 121111000 00000000 000011 111333357788777777778888888754
No 221
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.49 E-value=26 Score=34.45 Aligned_cols=117 Identities=17% Similarity=0.232 Sum_probs=72.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVADs~ 162 (507)
.-..|++.++|..+++-+..+.|+.++... +......... .....+++.+ +|+++++-+.
T Consensus 167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~~~----------------~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRT---GQCSLTLSIE----------------DGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEECS----------------SCEEEEEECSTTCCEEEEEET
T ss_pred CEEEEEEcCCCCEEEEecCCCcEEEEECCC---CeeEEEEEcC----------------CCcEEEEEECCCCCEEEEEcC
Confidence 456899999999888888889999999762 3332222110 1355788888 8888888777
Q ss_pred CCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 163 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 163 N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
.+.|+.+|.. + +..+..... . ....-....+|++ .+++.++++-...+.|+.+++..
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~-~---------~~~h~~~v~~v~~-~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENE-S---------GTGHKDSVYSVVF-TRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC----------------CCCSSCEEEEEE-CTTSSEEEEEETTSEEEEEEC--
T ss_pred CCcEEEEECCCCcEEEeeccccc-C---------CCCCCCCEEEEEE-CCCCCEEEEEeCCCEEEEEECCC
Confidence 8889999843 3 333311000 0 0001113346664 56677667767778888888764
No 222
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=86.47 E-value=24 Score=34.01 Aligned_cols=114 Identities=17% Similarity=0.152 Sum_probs=67.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
.-..|+++|+|.++++-+..+.|+.++.+......+..+-|. -.....|+++++|+++++=+..
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h----------------~~~v~~v~~sp~~~~l~s~s~D 126 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGH----------------ENEVKSVAWAPSGNLLATCSRD 126 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCC----------------CCCceEEEEeCCCCEEEEEECC
Confidence 356899999999888888788888887652110011222211 1235689999999988877777
Q ss_pred CeEEEEcCC-C--cE---EEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 164 MAIRKISDT-G--VT---TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 164 ~rIrk~d~~-G--Vs---tIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
+.|+.++.. + .. ++.+. -..-..+++ .+++.++++-...+.|+.++....
T Consensus 127 ~~v~iwd~~~~~~~~~~~~~~~h-----------------~~~v~~~~~-~p~~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 127 KSVWVWEVDEEDEYECVSVLNSH-----------------TQDVKHVVW-HPSQELLASASYDDTVKLYREEED 182 (345)
T ss_dssp SCEEEEEECTTSCEEEEEEECCC-----------------CSCEEEEEE-CSSSSCEEEEETTSCEEEEEEETT
T ss_pred CeEEEEECCCCCCeEEEEEecCc-----------------CCCeEEEEE-CCCCCEEEEEeCCCcEEEEEecCC
Confidence 788888732 2 22 22110 011234553 455555555555667777766544
No 223
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=86.46 E-value=17 Score=34.10 Aligned_cols=126 Identities=10% Similarity=0.060 Sum_probs=72.1
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCC-CCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEEEEe
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSL-SPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g-~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIYVAD 160 (507)
.....+++++++ |+++ ...+.|+.++... .. ......... .-.....|++++ +|+++++-
T Consensus 151 ~~v~~~~~~~~~-l~~~-~~d~~i~i~d~~~~~~-~~~~~~~~~---------------~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVG-MNNSQVQWFRLPLCED-DNGTIEESG---------------LKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp CCEEEEEECSSE-EEEE-ESTTEEEEEESSCCTT-CCCEEEECS---------------CSSCEEEEEECSGGGCEEEEE
T ss_pred CceEEEEecCCc-EEEE-eCCCeEEEEECCcccc-ccceeeecC---------------CCCceeEEEECCCCCCEEEEE
Confidence 467889998886 5555 5567999998763 11 111111110 012467899999 99977777
Q ss_pred CCCCeEEEEc--CC------C-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 161 TMNMAIRKIS--DT------G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 161 s~N~rIrk~d--~~------G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
+..+.|+.++ .. . +.++.+..... . ..........+++ .+++.++++-..++.|+.+++...
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL-----K---DTNLAYPVNSIEF-SPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT-----T---CCSSCCCEEEEEE-CTTTCCEEEEETTSCEEEEETTTT
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccc-----c---ccccceeEEEEEE-cCCCCEEEEecCCceEEEEcCccH
Confidence 7788888754 43 2 34443321100 0 0011123446664 556665556556788888888766
Q ss_pred ceee
Q 010579 232 DCSD 235 (507)
Q Consensus 232 ~~~~ 235 (507)
.+..
T Consensus 284 ~~~~ 287 (342)
T 1yfq_A 284 KKIK 287 (342)
T ss_dssp EEEE
T ss_pred hHhh
Confidence 6543
No 224
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.44 E-value=16 Score=38.56 Aligned_cols=72 Identities=11% Similarity=0.213 Sum_probs=43.3
Q ss_pred eeEEEEcCCCc-EEEEeCC-------CCeEEEEeCCC-CCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC
Q 010579 85 PFSVAVSPSGE-LLVLDSE-------NSNIYKISTSL-SPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 155 (507)
Q Consensus 85 P~gIaVd~dG~-LYVaDs~-------n~rI~ki~~~g-~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn 155 (507)
...++++|||. |+++... ...|+.++.++ +..+....+.... -..+..+++++||.
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~---------------~~~~~~~~~spdg~ 254 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP---------------EEAIAQAEWAPDGS 254 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---------------TBCEEEEEECTTSC
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---------------CceEcceEECCCCe
Confidence 45678999997 5444322 25788888762 1001333333210 12456789999999
Q ss_pred EEEEeCCCC--eEEEEcC
Q 010579 156 IYIADTMNM--AIRKISD 171 (507)
Q Consensus 156 IYVADs~N~--rIrk~d~ 171 (507)
||++...++ +|.+++.
T Consensus 255 l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp EEEEECTTSSCEEEEECT
T ss_pred EEEEECCCCCeEEEEEEC
Confidence 777654444 8999985
No 225
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=86.35 E-value=11 Score=40.09 Aligned_cols=121 Identities=11% Similarity=0.148 Sum_probs=76.1
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
.-..|++.|+|. ++++-+..+.|+.++.. .++.. ++.| + -.....|+++++|.++++=+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~---~~~~~~~l~~-------H---------~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGP---PFKFKSTFGE-------H---------TKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETT---TBEEEEEECC-------C---------SSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECC---CCeEeeeecc-------c---------cCceEEEEECCCCCEEEEEE
Confidence 457889999875 57777778889999864 12222 2211 1 12456899999999888888
Q ss_pred CCCeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 162 MNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 162 ~N~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
..+.|+.++. .| +.++..... . ....-....+|++ .+++.++++-...+.|+..++....|.
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~-~---------~~~h~~~V~~v~~-spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSL-K---------NVAHSGSVFGLTW-SPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTS-S---------SCSSSSCEEEEEE-CTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCcEEEEECCCCcEeeeeccccc-c---------ccccCCCEEEEEE-CCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 8888999983 44 233211000 0 0001123456664 567777777777788888888766554
No 226
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.25 E-value=10 Score=38.92 Aligned_cols=119 Identities=8% Similarity=0.048 Sum_probs=69.3
Q ss_pred CeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCC-CCEEEEe
Q 010579 84 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d-GnIYVAD 160 (507)
....+++.++|. ++++-...+.|+.++... ++.. .+.+.. +. -.....++++++ |+++++-
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~~~~~-------~~------~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASDRTHH-------KQ------GSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEEEEEECSSS-------CT------TCCEEEEEECSTTCCEEEEE
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cceeeeecccC-------CC------CceEEEEEECCCCCCEEEEE
Confidence 567899999886 777777889999998752 3322 221110 00 013568999999 9977776
Q ss_pred CCCCeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 161 TMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 161 s~N~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+.++.|+.++. .+ +.++..... + .-....++++ . ++.++++-..++.|+.+++....+
T Consensus 226 ~~dg~i~vwd~~~~~~~~~~~~~~~----~---------~~~~v~~~~~-~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 226 GSDRKISCFDGKSGEFLKYIEDDQE----P---------VQGGIFALSW-L-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp ETTCCEEEEETTTCCEEEECCBTTB----C---------CCSCEEEEEE-S-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred eCCCeEEEEECCCCCEeEEeccccc----c---------cCCceEEEEE-c-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 67888999994 34 233311000 0 0012234553 3 555555555556677777665444
No 227
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.10 E-value=13 Score=35.81 Aligned_cols=116 Identities=10% Similarity=0.001 Sum_probs=67.2
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc--EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP--KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i--~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
....++++|+|.++++-...+.|+.++... +.. ..+.+ ++ -.....|+++++|.++++-.
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~---~~~~~~~~~~------~h---------~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSS---PDQASSRFPV------DE---------EAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSC---TTSCCEECCC------CT---------TSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCC---CCCCccEEec------cC---------CCCEEEEEEeCCCCEEEEEe
Confidence 356889999998888877788999998762 222 12211 01 12456899999998666544
Q ss_pred CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC-CCeEEEEECCCC
Q 010579 162 MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHDD 231 (507)
Q Consensus 162 ~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g-n~rIr~I~l~~~ 231 (507)
.+ .|+.+|... +.++..-. + ....... ..+++ +++|.++++-.+ ++.|+.++.+..
T Consensus 234 ~~-~v~iwd~~~~~~~~~~~~~~--------~---~~~~~~~-~~~~~-~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 234 DQ-TVVCFDLRKDVGTLAYPTYT--------I---PEFKTGT-VTYDI-DDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp SS-BEEEEETTSSTTCBSSCCCB--------C--------CC-EEEEE-CTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CC-eEEEEEcCCCCcceeecccc--------c---ccccccc-eEEEE-CCCCCEEEEecCCCCcEEEEEEccc
Confidence 44 899998443 22221100 0 0001111 34664 666666555443 778888876543
No 228
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.88 E-value=12 Score=36.07 Aligned_cols=72 Identities=10% Similarity=0.094 Sum_probs=41.2
Q ss_pred eeEEEEcC-CCc-E-EEEeCC----CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-E
Q 010579 85 PFSVAVSP-SGE-L-LVLDSE----NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-I 156 (507)
Q Consensus 85 P~gIaVd~-dG~-L-YVaDs~----n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-I 156 (507)
...++++| ||. | |+++.. ..+|+.++.++ +....+.... .+ .....+++++||+ |
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~---~~~~~l~~~~-------~~-------~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG---TNMRKVKTHA-------EG-------ESCTHEFWVPDGSAL 252 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS---CCCEESCCCC-------TT-------EEEEEEEECTTSSCE
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC---CceEEeeeCC-------CC-------cccccceECCCCCEE
Confidence 45788999 886 3 444432 45899998763 2333332211 00 0123568999997 5
Q ss_pred -EEEeCCCC---eEEEEcCCC
Q 010579 157 -YIADTMNM---AIRKISDTG 173 (507)
Q Consensus 157 -YVADs~N~---rIrk~d~~G 173 (507)
|+++.... .|++++..+
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTT
T ss_pred EEEecCCCCCcceEEEEecCC
Confidence 55654332 399999543
No 229
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=85.64 E-value=41 Score=35.90 Aligned_cols=119 Identities=15% Similarity=0.091 Sum_probs=74.5
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCC--CEEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG--NIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG--nIYVADs 161 (507)
.-..|+++++|.++++-+..+.|+.++..+ .....+.... .++ -..-..+++++++ .++++-+
T Consensus 474 ~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~---~~~~~~~~~~---~~h---------~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 474 DVLSVAFSLDNRQIVSASRDRTIKLWNTLG---ECKYTISEGG---EGH---------RDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTS---CEEEEECSST---TSC---------SSCEEEEEECSCSSSCEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEECCC---CcceeeccCC---CCC---------CCcEEEEEEeCCCCcceEEEEe
Confidence 456788999988888878888999998652 1111221111 111 1234578888876 4666666
Q ss_pred CCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee
Q 010579 162 MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 235 (507)
Q Consensus 162 ~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~ 235 (507)
..+.|+.+|... +.++.+-. .....|+ ..++++++++-...+.|+.+++....+..
T Consensus 539 ~d~~v~vwd~~~~~~~~~~~~h~-----------------~~v~~v~-~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLRSTLAGHT-----------------GYVSTVA-VSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp TTSCEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCCC-----------------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 677888888443 33332210 1234566 46677777777778889988888776654
No 230
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=85.46 E-value=12 Score=34.33 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=66.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
....+++.++|. +++-...+.|+.++... +... .+.+. -.....|+++++|.|+.+ ..
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~---~~~~~~~~~~----------------~~~i~~~~~~~~~~l~~~-~~ 244 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHT---GDVLRTYEGH----------------ESFVYCIKLLPNGDIVSC-GE 244 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTT---CCEEEEEECC----------------SSCEEEEEECTTSCEEEE-ET
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCc---hhhhhhhhcC----------------CceEEEEEEecCCCEEEE-ec
Confidence 466788888877 44445567888888752 2222 22111 124568999999975555 45
Q ss_pred CCeEEEEcC-CC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 163 NMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 163 N~rIrk~d~-~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.+.|+.++. .+ +.++.+.. .....+++ .+++.++++ ...+.|+.+++....+
T Consensus 245 dg~v~iwd~~~~~~~~~~~~~~-----------------~~i~~~~~-~~~~~~~~~-~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 245 DRTVRIWSKENGSLKQVITLPA-----------------ISIWSVDC-MSNGDIIVG-SSDNLVRIFSQEKSRW 299 (313)
T ss_dssp TSEEEEECTTTCCEEEEEECSS-----------------SCEEEEEE-CTTSCEEEE-ETTSCEEEEESCGGGC
T ss_pred CCEEEEEECCCCceeEEEeccC-----------------ceEEEEEE-ccCCCEEEE-eCCCcEEEEeCCCCce
Confidence 778999994 34 34442210 12345664 566665554 4567888888876544
No 231
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=85.32 E-value=30 Score=34.02 Aligned_cols=133 Identities=11% Similarity=0.041 Sum_probs=75.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEc----CCCCEEEE
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD----DRGNIYIA 159 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd----~dGnIYVA 159 (507)
....++++++|.++++-+..+.|+.++... +......... + . ..-..|++. ++|.++++
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~-----~-~--------~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRF---NVLIRSWSFG-----D-H--------APITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTT---TEEEEEEBCT-----T-C--------EEEEEEEECTTTCTTEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCC---ccEEEEEecC-----C-C--------CceEEEEeccccCCCccEEEE
Confidence 577899999999888888889999999862 3322211100 0 0 012355333 46767777
Q ss_pred eCCCCeEEEEcCC-C--cEEEecCcccCC---CCCCCCCccCccC------CCCceEEEEcCCCeEEEEeCCCCeEEEEE
Q 010579 160 DTMNMAIRKISDT-G--VTTIAGGKWSRG---VGHVDGPSEDAKF------SNDFDVVYVGSSCSLLVIDRGNQAIREIQ 227 (507)
Q Consensus 160 Ds~N~rIrk~d~~-G--VstIaGG~~g~~---~G~~dg~~~~a~f------~~P~gIa~vd~~G~LyVaD~gn~rIr~I~ 227 (507)
-+.++.|+.+|.. + +.++.+...... .........+..+ ..-..+++. ++.++++-...+.|+.++
T Consensus 279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFS 356 (437)
T ss_dssp ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEE
T ss_pred EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEE
Confidence 7777788888853 4 444443211000 0000000000111 124567754 667788888889999999
Q ss_pred CCCCceee
Q 010579 228 LHDDDCSD 235 (507)
Q Consensus 228 l~~~~~~~ 235 (507)
+....+..
T Consensus 357 ~~~~~~~~ 364 (437)
T 3gre_A 357 LNELSSSK 364 (437)
T ss_dssp TTCGGGCE
T ss_pred CCCcccce
Confidence 88766543
No 232
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=85.20 E-value=25 Score=33.10 Aligned_cols=119 Identities=11% Similarity=0.099 Sum_probs=70.3
Q ss_pred CCeeEEEEcCC--CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC--------
Q 010579 83 MEPFSVAVSPS--GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-------- 152 (507)
Q Consensus 83 ~~P~gIaVd~d--G~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-------- 152 (507)
.....+++.++ |.++++-...+.|+.++...........+.+. -.....+++++
T Consensus 102 ~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 102 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC----------------TTCEEEEEECCCC------
T ss_pred cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC----------------CCceEEEEEcCcccccccc
Confidence 35678899998 88888777888999998763211111111111 12345677777
Q ss_pred -----CCCEEEEeCCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCC---CeEEEEeCCCC
Q 010579 153 -----RGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS---CSLLVIDRGNQ 221 (507)
Q Consensus 153 -----dGnIYVADs~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~---G~LyVaD~gn~ 221 (507)
+++++++-+.++.|+.++.. + ...+..... + .-....++++ .++ +.++++-...+
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~---------h~~~v~~~~~-sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE----G---------HSDWVRDVAW-SPTVLLRSYLASVSQDR 231 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC----C---------CSSCEEEEEE-CCCCSSSEEEEEEETTS
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe----c---------ccCcEeEEEE-CCCCCCCCeEEEEeCCC
Confidence 68877777777788888732 2 111110000 0 0112346664 455 67777777778
Q ss_pred eEEEEECCCC
Q 010579 222 AIREIQLHDD 231 (507)
Q Consensus 222 rIr~I~l~~~ 231 (507)
.|+.+++...
T Consensus 232 ~i~iwd~~~~ 241 (379)
T 3jrp_A 232 TCIIWTQDNE 241 (379)
T ss_dssp CEEEEEESST
T ss_pred EEEEEeCCCC
Confidence 8888887764
No 233
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=84.94 E-value=13 Score=39.56 Aligned_cols=64 Identities=8% Similarity=0.129 Sum_probs=41.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~ 162 (507)
.+..++++||+.|+++- ++.|+.++..+ +....+.... .....++++|||+ |+++ .
T Consensus 83 ~v~~~~~spd~~~~~~~--~~~i~~~d~~~---~~~~~l~~~~----------------~~~~~~~~SpdG~~la~~--~ 139 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFT--QGGLVGFDMLA---RKVTYLFDTN----------------EETASLDFSPVGDRVAYV--R 139 (706)
T ss_dssp CCEEEEETTTTEEEEEE--TTEEEEEETTT---TEEEEEECCT----------------TCCTTCEECTTSSEEEEE--E
T ss_pred CceeEEECCCCeEEEEE--CCEEEEEECCC---CceEEccCCc----------------ccccCCcCCCCCCEEEEE--E
Confidence 57899999996666663 38999999863 4444333221 1244678888887 3333 3
Q ss_pred CCeEEEEc
Q 010579 163 NMAIRKIS 170 (507)
Q Consensus 163 N~rIrk~d 170 (507)
++.|++++
T Consensus 140 ~~~i~v~~ 147 (706)
T 2z3z_A 140 NHNLYIAR 147 (706)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEe
Confidence 46677777
No 234
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=84.58 E-value=7.7 Score=39.86 Aligned_cols=111 Identities=12% Similarity=0.186 Sum_probs=70.7
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC----------
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD---------- 152 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~---------- 152 (507)
.....++++++|.++++-...+.|+.++... +...... .+ ..-.....+++++
T Consensus 489 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~---~~~~~~~------~~--------~h~~~v~~~~~sp~~~~~~~~~~ 551 (615)
T 1pgu_A 489 AKPSYISISPSETYIAAGDVMGKILLYDLQS---REVKTSR------WA--------FRTSKINAISWKPAEKGANEEEI 551 (615)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEECC------SC--------CCSSCEEEEEECCCC------CC
T ss_pred CceEEEEECCCCCEEEEcCCCCeEEEeeCCC---CcceeEe------ec--------CCCCceeEEEEcCcccccccccc
Confidence 4678899999999888888889999999862 3221110 01 0123467899999
Q ss_pred CCCEEEEeCCCCeEEEEcCCC----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEEC
Q 010579 153 RGNIYIADTMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 228 (507)
Q Consensus 153 dGnIYVADs~N~rIrk~d~~G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l 228 (507)
+|.++++=+..+.|+.++... +.++.+ + -....+|++. +++. +++-...+.|+.+++
T Consensus 552 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--------h---------~~~v~~l~~s-~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 552 EEDLVATGSLDTNIFIYSVKRPMKIIKALNA--------H---------KDGVNNLLWE-TPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp SCCEEEEEETTSCEEEEESSCTTCCEEETTS--------S---------TTCEEEEEEE-ETTE-EEEEETTSCEEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCceechhhhc--------C---------ccceEEEEEc-CCCC-eEEecCCceEEEEee
Confidence 899888777778899888432 222211 0 1134567764 4555 555555677877776
Q ss_pred C
Q 010579 229 H 229 (507)
Q Consensus 229 ~ 229 (507)
+
T Consensus 613 ~ 613 (615)
T 1pgu_A 613 V 613 (615)
T ss_dssp C
T ss_pred e
Confidence 5
No 235
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=84.30 E-value=7.7 Score=36.56 Aligned_cols=110 Identities=12% Similarity=0.033 Sum_probs=65.2
Q ss_pred EcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC---CCCEEEEeCCCCeE
Q 010579 90 VSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD---RGNIYIADTMNMAI 166 (507)
Q Consensus 90 Vd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~---dGnIYVADs~N~rI 166 (507)
++++|.++++-..++.|+.++... +......+. -.....+++++ +|+++++-+.++.|
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRN---MALRWETNI----------------KNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCEEEEEccCCeEEEEECcc---CceeeecCC----------------CCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 567888888888889999999862 333222211 12456899998 88877776778889
Q ss_pred EEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCe-EEEEeCCCCeEEEEECCCC
Q 010579 167 RKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 167 rk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~-LyVaD~gn~rIr~I~l~~~ 231 (507)
+.++... +..+..... ...-.....+++ .+++. ++++-...+.|+.+++...
T Consensus 237 ~i~d~~~~~~~~~~~~~~~------------~~~~~~v~~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSE------------KAHKSTVWQVRH-LPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEEEEEETTTEEEEEEE------------ECCSSCEEEEEE-ETTEEEEEEEEETTSEEEEEEEECC
T ss_pred EEEeCcCCCcccceeeecc------------CCCcCCEEEEEE-CCCCCcEEEEEeCCCcEEEeecCCC
Confidence 9888332 222210000 000112345665 44555 6666666778888876643
No 236
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=84.30 E-value=4.1 Score=39.34 Aligned_cols=114 Identities=9% Similarity=-0.003 Sum_probs=66.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCC-CCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSP-YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~-~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|+++++|+++++-+..+.|+.++..... ......+.+. -.....++++++|+++++-+.
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~ 120 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL----------------NRAATFVRWSPNEDKFAVGSG 120 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC----------------SSCEEEEECCTTSSCCEEEES
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc----------------CCceEEEEECCCCCEEEEEec
Confidence 45689999999888877777889999876211 0011111111 124568899999986666666
Q ss_pred CCeEEEEcCCC------cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 163 NMAIRKISDTG------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 163 N~rIrk~d~~G------VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
.+.|+.++... +..+.+.. -....+|++ .+++.++++-...+.|+.+++..
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 121 ARVISVCYFEQENDWWVSKHLKRPL----------------RSTILSLDW-HPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp SSCEEECCC-----CCCCEEECSSC----------------CSCEEEEEE-CTTSSEEEEEESSSCEEEEEECC
T ss_pred CCeEEEEEECCcccceeeeEeeccc----------------CCCeEEEEE-cCCCCEEEEEeCCCEEEEEEEEe
Confidence 77788887433 23332100 113456664 55666666666678888888753
No 237
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=83.98 E-value=26 Score=34.78 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=44.7
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeEE
Q 010579 89 AVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIR 167 (507)
Q Consensus 89 aVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rIr 167 (507)
+++++|+++++-...+.|+.++... +... .+.+. -.....++++++|+.+++-+..+.|+
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~sg~~dg~i~ 335 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQ---MKCLYILSGH----------------TDRIYSTIYDHERKRCISASMDTTIR 335 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTT---TEEEEEECCC----------------SSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCC---CcEEEEecCC----------------CCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 4456677777777778899998752 3222 22111 12456899999999888877788899
Q ss_pred EEcC-CC
Q 010579 168 KISD-TG 173 (507)
Q Consensus 168 k~d~-~G 173 (507)
.+|. .+
T Consensus 336 vwd~~~~ 342 (464)
T 3v7d_B 336 IWDLENG 342 (464)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9994 44
No 238
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=83.70 E-value=57 Score=37.22 Aligned_cols=111 Identities=8% Similarity=0.064 Sum_probs=66.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcC--CCCEEEEe
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~--dGnIYVAD 160 (507)
.-..++++++|.++++-+..+.|+.++... +.. ..+.+. -.....+++.+ ++.++++-
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~---~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~sg 719 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSAT---GKLVHTYDEH----------------SEQVNCCHFTNKSNHLLLATG 719 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---CCEEEEEECC----------------SSCEEEEEECSSSSCCEEEEE
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCC---CceEEEEcCC----------------CCcEEEEEEecCCCceEEEEE
Confidence 567899999999888888889999999863 332 222221 12345677877 44466666
Q ss_pred CCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 161 TMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 161 s~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
+.++.|+.+|.. + +.++.+.. ....++++ .+++.++++-...+.|+.+++...
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~h~-----------------~~v~~~~~-sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFGHT-----------------NSVNHCRF-SPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECCCS-----------------SCEEEEEE-CSSTTEEEEEESSSEEEEEEGGGT
T ss_pred eCCCeEEEEECCCcchhheecCCC-----------------CCEEEEEE-ecCCCEEEEEECCCeEEEEeCCCC
Confidence 667788888843 3 33442211 12234443 445555555555566666665543
No 239
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.66 E-value=35 Score=32.70 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=50.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..|+++++|.++++-+..+.|+.++... ++ +..+.+.. .....|+++++|+.+++=+.
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~---~~~~~~~~~h~----------------~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRT---GTTYKRFVGHQ----------------SEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTS---SCEEEEEECCC----------------SCEEEEEECSSTTEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCC---CcEEEEEcCCC----------------CcEEEEEECCCCCEEEEEcC
Confidence 346889999999988888889999999762 32 22333221 23467999999987777666
Q ss_pred CCeEEEEcCCC
Q 010579 163 NMAIRKISDTG 173 (507)
Q Consensus 163 N~rIrk~d~~G 173 (507)
.+.|+.++..+
T Consensus 139 d~~i~~wd~~~ 149 (343)
T 2xzm_R 139 EREIKLWNILG 149 (343)
T ss_dssp TSCEEEEESSS
T ss_pred CCEEEEEeccC
Confidence 77888888544
No 240
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=82.28 E-value=32 Score=31.99 Aligned_cols=74 Identities=14% Similarity=0.232 Sum_probs=49.5
Q ss_pred CeeEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCC--cc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEE
Q 010579 84 EPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYS--RP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 159 (507)
Q Consensus 84 ~P~gIaVd~d-G~LYVaDs~n~rI~ki~~~g~~~g--~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVA 159 (507)
.=..|+++|+ ++++++-+..+.|+.++....... .. .++. |+ -.....++++++|+++++
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-------~h---------~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR-------GH---------SHFVSDVVISSDGQFALS 103 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC-------CC---------SSCEEEEEECTTSSEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe-------CC---------CCCEEEEEECCCCCEEEE
Confidence 3568999986 688888877888999886522111 00 1111 11 124568999999998877
Q ss_pred eCCCCeEEEEcCCC
Q 010579 160 DTMNMAIRKISDTG 173 (507)
Q Consensus 160 Ds~N~rIrk~d~~G 173 (507)
=.....|+..+...
T Consensus 104 ~~~d~~i~~~~~~~ 117 (340)
T 4aow_A 104 GSWDGTLRLWDLTT 117 (340)
T ss_dssp EETTSEEEEEETTT
T ss_pred EcccccceEEeecc
Confidence 77778888888544
No 241
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=81.27 E-value=31 Score=32.22 Aligned_cols=74 Identities=9% Similarity=-0.042 Sum_probs=47.1
Q ss_pred CeeEEEEcC---CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEE
Q 010579 84 EPFSVAVSP---SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 159 (507)
Q Consensus 84 ~P~gIaVd~---dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVA 159 (507)
....+++++ +|+++++-...+.|+.++..... ....+.-. ...+ .-.....++++++|. ++++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~--~~~~---------~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH--PTKGFASV--SEKA---------HKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE--TTTEEEEE--EEEC---------CSSCEEEEEEETTEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC--cccceeee--ccCC---------CcCCEEEEEECCCCCcEEEE
Confidence 567899998 88877777778899999864211 01111000 0001 123456899999988 6776
Q ss_pred eCCCCeEEEEc
Q 010579 160 DTMNMAIRKIS 170 (507)
Q Consensus 160 Ds~N~rIrk~d 170 (507)
-..++.|+.++
T Consensus 278 ~~~dg~i~iwd 288 (357)
T 3i2n_A 278 AGGAGGLHLWK 288 (357)
T ss_dssp EETTSEEEEEE
T ss_pred EeCCCcEEEee
Confidence 66677888887
No 242
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=81.21 E-value=23 Score=33.86 Aligned_cols=112 Identities=9% Similarity=0.044 Sum_probs=64.6
Q ss_pred CeeEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC---CCCEEEE
Q 010579 84 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD---RGNIYIA 159 (507)
Q Consensus 84 ~P~gIaVd~-dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~---dGnIYVA 159 (507)
....|++.+ ++.++++-...+.|+.++... +......... .....+++.+ ++.++++
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNT---LQTADVFNFE----------------ETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTT---TEEEEEEECS----------------SCEEEEEECSSCSSCCEEEE
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCC---CccceeccCC----------------CceeeeEeecCCCCCcEEEE
Confidence 567899999 677777777788999999862 3332222111 1234556655 4446666
Q ss_pred eCCCCeEEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 160 DTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 160 Ds~N~rIrk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
-..++.|+.++.. + +.++.+.. ....++++.+....|+++-..++.|+.+++...
T Consensus 162 ~~~~~~v~~~d~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 162 GTRGPKVQLCDLKSGSCSHILQGHR-----------------QEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp EESSSSEEEEESSSSCCCEEECCCC-----------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred EcCCCeEEEEeCCCcceeeeecCCC-----------------CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 6667778888843 2 34442210 122355543333335656556677887777553
No 243
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=81.19 E-value=27 Score=34.17 Aligned_cols=83 Identities=10% Similarity=0.040 Sum_probs=48.1
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC------Cc---cEEEecCCCCccccCCCCccccc-CCCcceEEEcCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPY------SR---PKLVAGSPEGYYGHVDGRPRGAR-MNHPKGLAVDDR 153 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~------g~---i~~vaG~~~G~~G~~dG~~~~a~-fn~P~GIaVd~d 153 (507)
.-..|+++++|.++++-...+.|+.++...... +. ...+.|... .... ..... -.....|++.++
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~-~~~~----~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEP-EFDY----LKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCC-EEEG----GGTEEECCCCCEEEECCC
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccc-cccc----cccccccCceEEEEEcCC
Confidence 456889999999888877889999998763210 00 122222110 0000 00000 023568999998
Q ss_pred C--CEEEEeCCCCeEEEEcC
Q 010579 154 G--NIYIADTMNMAIRKISD 171 (507)
Q Consensus 154 G--nIYVADs~N~rIrk~d~ 171 (507)
+ .++++-+..+.|+.++.
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~ 124 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKI 124 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEE
T ss_pred CCcceEEEeCCCCeEEEEec
Confidence 7 66666667778888773
No 244
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=80.73 E-value=15 Score=35.39 Aligned_cols=113 Identities=20% Similarity=0.195 Sum_probs=67.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCC----CCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEE
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSP----YSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYI 158 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~----~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYV 158 (507)
.-..|+++|+|.++++-+..+.|+.++..... .... .++.| + -..-..|+++++|++++
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-------h---------~~~V~~v~~sp~g~~la 123 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-------H---------ENEVKGVAWSNDGYYLA 123 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--------------------CEEEEEECTTSCEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-------C---------CCcEEEEEECCCCCEEE
Confidence 35689999999988888888999999874211 0111 11111 1 12356899999999888
Q ss_pred EeCCCCeEEEEcCC--C-----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 159 ADTMNMAIRKISDT--G-----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 159 ADs~N~rIrk~d~~--G-----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
+=+..+.|+.++.. + +.++.+- -.....|++ .+++.++++-...+.|+..+...
T Consensus 124 s~s~D~~v~iwd~~~~~~~~~~~~~~~~h-----------------~~~v~~v~~-~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 124 TCSRDKSVWIWETDESGEEYECISVLQEH-----------------SQDVKHVIW-HPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp EEETTSCEEEEECCTTCCCCEEEEEECCC-----------------SSCEEEEEE-CSSSSEEEEEETTSCEEEEEEET
T ss_pred EEeCCCEEEEEeccCCCCCeEEEEEeccC-----------------CCceEEEEE-CCCCCEEEEEcCCCeEEEEECCC
Confidence 77777888888852 2 1222110 012235554 45666666666667777776544
No 245
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=80.68 E-value=45 Score=32.69 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=45.7
Q ss_pred EcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeEEE
Q 010579 90 VSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRK 168 (507)
Q Consensus 90 Vd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rIrk 168 (507)
+.++|.++++-...+.|+.++... +.. ..+.+.. .-.....|+++++|+++++=+.++.|+.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~--------------h~~~v~~~~~s~~~~~l~s~~~dg~i~i 240 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRT---LERLQIIENSP--------------RHGAVSSICIDEECCVLILGTTRGIIDI 240 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTT---CCEEEEEECCG--------------GGCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCC---CeeeEEEccCC--------------CCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 446788888888889999999862 322 2222210 1124678999999998887777888999
Q ss_pred EcCC
Q 010579 169 ISDT 172 (507)
Q Consensus 169 ~d~~ 172 (507)
+|..
T Consensus 241 wd~~ 244 (437)
T 3gre_A 241 WDIR 244 (437)
T ss_dssp EETT
T ss_pred EEcC
Confidence 9843
No 246
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.30 E-value=40 Score=32.18 Aligned_cols=124 Identities=14% Similarity=0.135 Sum_probs=61.5
Q ss_pred CeeEEEEcCCCc-EEEE-e-CCCCe--EEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC-CCCEE
Q 010579 84 EPFSVAVSPSGE-LLVL-D-SENSN--IYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIY 157 (507)
Q Consensus 84 ~P~gIaVd~dG~-LYVa-D-s~n~r--I~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-dGnIY 157 (507)
.+..++++|||. |+++ . ....+ |++++..+ +....+.... + . .+++.+ ||.++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~---g~~~~l~~~~--------~------~----~~~~s~~dg~~l 297 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET---LENEEVMVMP--------P------C----SHLMSNFDGSLM 297 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT---CCEEEEEECC--------S------E----EEEEECSSSSEE
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCC---CCeEEeeeCC--------C------C----CCCccCCCCceE
Confidence 355678999987 5544 2 23334 99998762 4443332110 0 1 167888 89877
Q ss_pred EEeC----------------CCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC-
Q 010579 158 IADT----------------MNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR- 218 (507)
Q Consensus 158 VADs----------------~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~- 218 (507)
++.. ++..|++++..+ +..+...... .+..+. +. ......+++.++...|+++..
T Consensus 298 ~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~---~~-~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 298 VGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTS--WDVLDG---DR-QITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp EEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCC--CCCBTT---BS-STTCCCCEECTTSSEEEEEECT
T ss_pred EEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCc--cccccc---cc-cCCCCCceEccCCCeEEEEecC
Confidence 7543 346788898543 4344321100 000000 00 111233444333345655543
Q ss_pred -CCCeEEEEECCCCcee
Q 010579 219 -GNQAIREIQLHDDDCS 234 (507)
Q Consensus 219 -gn~rIr~I~l~~~~~~ 234 (507)
+...|..+++++..+.
T Consensus 372 ~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 372 EGVPAIYIADVPESYKH 388 (396)
T ss_dssp TSSCEEEEEECCTTCC-
T ss_pred CCCceEEEEEEcccccc
Confidence 3346777777665443
No 247
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=80.17 E-value=39 Score=31.57 Aligned_cols=69 Identities=10% Similarity=0.025 Sum_probs=50.6
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEE--cCCCCEEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAV--DDRGNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaV--d~dGnIYVADs 161 (507)
.-..|+++++|.++++-..++.|+.++... +....+.+.. .....|++ +++|+++++-+
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~~----------------~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSS---NQAIQIAQHD----------------APVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEECS----------------SCEEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCC---CCceeecccc----------------CceEEEEEEeCCCCCEEEEcc
Confidence 467899999998888777889999999873 4333333221 23567888 88888777777
Q ss_pred CCCeEEEEcC
Q 010579 162 MNMAIRKISD 171 (507)
Q Consensus 162 ~N~rIrk~d~ 171 (507)
.++.|+.+|.
T Consensus 149 ~dg~i~vwd~ 158 (368)
T 3mmy_A 149 WDKTLKFWDT 158 (368)
T ss_dssp TTSEEEEECS
T ss_pred CCCcEEEEEC
Confidence 7888999994
No 248
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=80.06 E-value=12 Score=42.33 Aligned_cols=29 Identities=7% Similarity=0.044 Sum_probs=24.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTS 112 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~ 112 (507)
....|+++|||.++++-...+.|+.++..
T Consensus 490 ~V~svafspdg~~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 490 AVDKISFAAETLELAVSIETGDVVLFKYE 518 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ceeEEEecCCCCeEEEEecCcEEEEEEec
Confidence 56899999999988888888898888865
No 249
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=79.19 E-value=30 Score=33.07 Aligned_cols=71 Identities=15% Similarity=0.094 Sum_probs=48.9
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCC-CCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLS-PYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 161 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~-~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs 161 (507)
.-..|+++|+|.++++-+..+.|+.++.... .... +..+.+. -.....|+++++|+++++=+
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH----------------SQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC----------------SSCEEEEEECSSSSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC----------------CCceEEEEECCCCCEEEEEc
Confidence 4568999999998888888899999987311 1111 1122111 12356899999999888877
Q ss_pred CCCeEEEEc
Q 010579 162 MNMAIRKIS 170 (507)
Q Consensus 162 ~N~rIrk~d 170 (507)
..+.|+..+
T Consensus 173 ~D~~i~iW~ 181 (330)
T 2hes_X 173 YDDTVRIWK 181 (330)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEE
Confidence 778888887
No 250
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=78.19 E-value=16 Score=34.94 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=66.7
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc---cEEEecCCCCccccCCCCcccccCCCcceEEEcC--CCCEEEE
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR---PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIA 159 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~---i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~--dGnIYVA 159 (507)
=..|+++++|+++++-+..+.|+.++... +. +..+.|.. ..-..|++.+ +|+++++
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~---~~~~~~~~l~gH~----------------~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRN---GGQILIADLRGHE----------------GPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEET---TEEEEEEEEECCS----------------SCEEEEEECCGGGSSCEEE
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecC---CCcEEEEEEcCCC----------------ccEEEEEeCCCCCCCEEEE
Confidence 35789999999988888889999998752 22 12222211 1234677764 4777776
Q ss_pred eCCCCeEEEEcCC-C----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcC-CCeEEEEeCCCCeEEEEECCC
Q 010579 160 DTMNMAIRKISDT-G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 160 Ds~N~rIrk~d~~-G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~-~G~LyVaD~gn~rIr~I~l~~ 230 (507)
=+..+.|+..+.. + +.++.+- -....+|++.++ ++.++++-...+.|+.+++..
T Consensus 77 ~s~D~~v~iWd~~~~~~~~~~~~~~h-----------------~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTWEKSHEHAGH-----------------DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp EETTSCEEEECCSSSCCCEEEEECCC-----------------SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred EECCCEEEEEECCCCcceEEEEccCC-----------------CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 6667788888843 2 1222110 012345665333 266777777778888887654
No 251
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=77.89 E-value=84 Score=34.26 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=51.3
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-----cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEE
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-----PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 159 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-----i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVA 159 (507)
-..++++|||.++++-...+.|+.++..+..... +.++-+.. .|+ .+.-..|++.|+| +++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~---~gh---------~~~V~sVawSPdg--Laa 197 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD---AGS---------KDWVTHIVWYEDV--LVA 197 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC---TTC---------CCCEEEEEEETTE--EEE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc---ccc---------cccEEEEEEcCCc--EEE
Confidence 5689999999987777888999999987422111 23332211 111 2467789999999 566
Q ss_pred eCCCCeEEEEcCCC
Q 010579 160 DTMNMAIRKISDTG 173 (507)
Q Consensus 160 Ds~N~rIrk~d~~G 173 (507)
-+..+.|+..+.++
T Consensus 198 ss~D~tVrlWd~~~ 211 (588)
T 2j04_A 198 ALSNNSVFSMTVSA 211 (588)
T ss_dssp EETTCCEEEECCCS
T ss_pred EeCCCeEEEEECCC
Confidence 66778899998544
No 252
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=77.53 E-value=54 Score=31.77 Aligned_cols=72 Identities=14% Similarity=0.204 Sum_probs=49.5
Q ss_pred CcceEEEcCCCCEEEEeCCCCe-EEEEcCC-C--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCC
Q 010579 144 HPKGLAVDDRGNIYIADTMNMA-IRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG 219 (507)
Q Consensus 144 ~P~GIaVd~dGnIYVADs~N~r-Irk~d~~-G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~g 219 (507)
....|+++++|+++++=+..+. |+.+|.. + +.++..|.. -..-.++++ .+++.++++-..
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h---------------~~~v~~~~~-s~~~~~l~s~s~ 260 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD---------------RADVVDMKW-STDGSKLAVVSD 260 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC---------------CSCEEEEEE-CTTSCEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---------------CCcEEEEEE-CCCCCEEEEEEC
Confidence 3468999999998888777786 9999943 4 455531100 012346664 667777777777
Q ss_pred CCeEEEEECCCC
Q 010579 220 NQAIREIQLHDD 231 (507)
Q Consensus 220 n~rIr~I~l~~~ 231 (507)
.+.|+.+++...
T Consensus 261 d~~v~iw~~~~~ 272 (355)
T 3vu4_A 261 KWTLHVFEIFND 272 (355)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEEccCC
Confidence 889999998653
No 253
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=77.17 E-value=7 Score=41.70 Aligned_cols=121 Identities=2% Similarity=-0.052 Sum_probs=64.8
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs~ 162 (507)
.+..+++.|||.++++ ...+.|+.++..+ +....+..... . .. .....+++++||+ |.++...
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~---g~~~~~~~~~~-------~----~~-~~v~~~~~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVET---NTSTVLIEGKK-------I----ES-LRAIRYEISPDREYALFSYNV 81 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGG---CCCEEEECTTT-------T----TT-TTCSEEEECTTSSEEEEEESC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCC---CcEEEEecccc-------c----cc-cccceEEECCCCCEEEEEecC
Confidence 4778899999996555 4567899998763 44444432210 0 00 1367899999999 4433221
Q ss_pred --------CCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCce--EEEEcCCCeEEEEeCCCCeEEEEEC
Q 010579 163 --------NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFD--VVYVGSSCSLLVIDRGNQAIREIQL 228 (507)
Q Consensus 163 --------N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~g--Ia~vd~~G~LyVaD~gn~rIr~I~l 228 (507)
...|++++..+ ...+.... +. +.......| +|.| |++. .++.||+.|...+..+++..
T Consensus 82 ~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-----~~-~~~~~~~~~-SPdG~~la~~-~~~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 82 EPIYQHSYTGYYVLSKIPHGDPQSLDPPE-----VS-NAKLQYAGW-GPKGQQLIFI-FENNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp CCCSSSCCCSEEEEEESSSCCCEECCCTT-----CC-SCCCSBCCB-CSSTTCEEEE-ETTEEEEESSSSSCCEEEEC
T ss_pred ccceeecceeeEEEEECCCCceEeccCCc-----cc-cccccccEE-CCCCCEEEEE-ECCeEEEEECCCCceEEEec
Confidence 25677887433 43332211 00 000111122 3433 5543 34677777776666555544
No 254
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.16 E-value=49 Score=31.08 Aligned_cols=72 Identities=10% Similarity=0.052 Sum_probs=46.9
Q ss_pred CeeEEEEcCC--CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC--CCEEEE
Q 010579 84 EPFSVAVSPS--GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR--GNIYIA 159 (507)
Q Consensus 84 ~P~gIaVd~d--G~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d--GnIYVA 159 (507)
.-..|++.++ |+++++-..++.|+.++... +....+.-. .+ .-.....|+++++ |+++++
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~----~~---------~~~~v~~~~~~~~~~~~~l~~ 120 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEEN---GRWSQIAVH----AV---------HSASVNSVQWAPHEYGPLLLV 120 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEET---TEEEEEEEE----CC---------CSSCEEEEEECCGGGCSEEEE
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC---CceeEeeee----cC---------CCcceEEEEeCCCCCCCEEEE
Confidence 3467888765 88887777788899998762 321111110 00 0124568899988 887777
Q ss_pred eCCCCeEEEEcC
Q 010579 160 DTMNMAIRKISD 171 (507)
Q Consensus 160 Ds~N~rIrk~d~ 171 (507)
=+.++.|+.++.
T Consensus 121 ~~~d~~i~v~d~ 132 (379)
T 3jrp_A 121 ASSDGKVSVVEF 132 (379)
T ss_dssp EETTSEEEEEEC
T ss_pred ecCCCcEEEEec
Confidence 777888888883
No 255
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=77.08 E-value=26 Score=39.54 Aligned_cols=68 Identities=10% Similarity=0.086 Sum_probs=46.3
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
....|+++|+|.++++-+..+.|+.++..+ ......... . ..-..|++.+ |.+.++=+..
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~---~~~~~~~~~--------~--------~~V~~l~fsp-g~~L~S~s~D 78 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQ---VEVVIKLED--------R--------SAIKEMRFVK-GIYLVVINAK 78 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTT---CEEEEECSS--------C--------CCEEEEEEET-TTEEEEEETT
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCC---cEEEEEcCC--------C--------CCEEEEEEcC-CCEEEEEECc
Confidence 467999999999988888889999998752 222111110 0 1345889998 7755544457
Q ss_pred CeEEEEcC
Q 010579 164 MAIRKISD 171 (507)
Q Consensus 164 ~rIrk~d~ 171 (507)
+.|+..|.
T Consensus 79 ~~v~lWd~ 86 (902)
T 2oaj_A 79 DTVYVLSL 86 (902)
T ss_dssp CEEEEEET
T ss_pred CeEEEEEC
Confidence 78888884
No 256
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=76.45 E-value=21 Score=39.06 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=70.3
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..-.+++++|||.+..+-+.++.|+.++.. +.+..+. . +..... ..-..++++|||++.++=+.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~----~~l~~l~-~--------~~~~~~---~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDN----KMLTNLD-S--------KGNLSS---RTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETT----EEEEECC-C--------SSCSTT---TCEEEEEECSSSSCEEEEET
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCC----ceeeecc-C--------CCcccc---ccEEEEEEcCCCCEEEEEcC
Confidence 357899999999988888888999999854 2222221 1 100000 12448999999996666667
Q ss_pred CCeEEEEcCCC--c--------EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 010579 163 NMAIRKISDTG--V--------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 232 (507)
Q Consensus 163 N~rIrk~d~~G--V--------stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~ 232 (507)
.+.|+.++..+ + .++-++.. |+ ...-.+|++. ++| +++-...+.|+..++.+..
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~----gh---------~~~V~sVawS-Pdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDA----GS---------KDWVTHIVWY-EDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCT----TC---------CCCEEEEEEE-TTE--EEEEETTCCEEEECCCSSS
T ss_pred CCEEEEEECCCCccccccceeeeeeecccc----cc---------cccEEEEEEc-CCc--EEEEeCCCeEEEEECCCCc
Confidence 88899999433 2 34422211 11 1234455543 444 4455556667776666655
Q ss_pred e
Q 010579 233 C 233 (507)
Q Consensus 233 ~ 233 (507)
+
T Consensus 214 ~ 214 (588)
T 2j04_A 214 H 214 (588)
T ss_dssp S
T ss_pred c
Confidence 3
No 257
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=76.16 E-value=68 Score=34.95 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=47.4
Q ss_pred eeEEEEcCC--CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC--CCEEEEe
Q 010579 85 PFSVAVSPS--GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR--GNIYIAD 160 (507)
Q Consensus 85 P~gIaVd~d--G~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d--GnIYVAD 160 (507)
-..|++.++ |+++++-+..+.|+.++... +....+... .++ -.....++++++ |+++++=
T Consensus 56 V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~---~~~~~~~~~----~~h---------~~~V~~v~~sp~~~~~~l~sg 119 (753)
T 3jro_A 56 VWRVDWAHPKFGTILASCSYDGKVLIWKEEN---GRWSQIAVH----AVH---------SASVNSVQWAPHEYGPLLLVA 119 (753)
T ss_dssp EEEEEECCTTSCSEEEEEETTSCEEEEEEET---TEEEEEEEE----CCC---------SSCEEEEEECCGGGCSEEEEE
T ss_pred eEEEEecCCCCCCEEEEEeCCCeEEEEECCC---Ccccccccc----cCC---------CCCeEEEEECCCCCCCEEEEE
Confidence 457888876 88888888888999998762 321111110 011 124568889988 8877777
Q ss_pred CCCCeEEEEcC
Q 010579 161 TMNMAIRKISD 171 (507)
Q Consensus 161 s~N~rIrk~d~ 171 (507)
+.++.|+.++.
T Consensus 120 s~dg~I~vwdl 130 (753)
T 3jro_A 120 SSDGKVSVVEF 130 (753)
T ss_dssp ETTSEEEEEEC
T ss_pred eCCCcEEEEEe
Confidence 77888888883
No 258
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=75.30 E-value=13 Score=38.82 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=21.2
Q ss_pred ceEEEcCCCCEEE--E-eCCC-CeEEEEcC-CC-cEEEe
Q 010579 146 KGLAVDDRGNIYI--A-DTMN-MAIRKISD-TG-VTTIA 178 (507)
Q Consensus 146 ~GIaVd~dGnIYV--A-Ds~N-~rIrk~d~-~G-VstIa 178 (507)
..+++++||...+ + |..+ ..|+.+|. +| +.++.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEEC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEee
Confidence 5889999998544 2 2223 56888884 34 55553
No 259
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=75.12 E-value=98 Score=33.56 Aligned_cols=110 Identities=8% Similarity=0.088 Sum_probs=65.7
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
..+..++.|.+|+|||+-. +-|.++++.. +....+. . +|. .-+...+|+.+ +|+|||+-
T Consensus 517 ~~~~~i~~d~~g~lWigt~--~Gl~~~~~~~---~~~~~~~--~-------~gl----~~~~i~~i~~~-~g~lWi~t-- 575 (758)
T 3ott_A 517 KSPNYLLCDEDGLLWVGFH--GGVMRINPKD---ESQQSIS--F-------GSF----SNNEILSMTCV-KNSIWVST-- 575 (758)
T ss_dssp GCEEEEEECTTSCEEEEET--TEEEEECC-----CCCCBCC--C-------CC-------CCEEEEEEE-TTEEEEEE--
T ss_pred cccceEEECCCCCEEEEec--CceEEEecCC---CceEEec--c-------cCC----CccceEEEEEC-CCCEEEEC--
Confidence 3578999999999999863 4799999763 2222110 0 111 11346678766 89999987
Q ss_pred CCeEEEEcCCCcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 163 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 163 N~rIrk~d~~GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
++-|.+|+.........+. ....|+ ..++.+.+|.||+.- ++-+..|+++.
T Consensus 576 ~~Gl~~~~~~~~~~~~~~~------------~~~~~~---~~~~~~~~G~l~fG~--~~Gl~~f~p~~ 626 (758)
T 3ott_A 576 TNGLWIIDRKTMDARQQNM------------TNKRFT---SLLFDPKEDCVYLGG--ADGFGISHSNL 626 (758)
T ss_dssp SSCEEEEETTTCCEEEC--------------CCCCCS---EEEEETTTTEEEEEC--BSEEEEEEC--
T ss_pred CCCeEEEcCCCceeEEecC------------CCCcee---eeEEECCCCcEEEec--CCceEEEChhh
Confidence 4558999966522211111 011232 344567799999986 45688888763
No 260
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=75.03 E-value=79 Score=35.82 Aligned_cols=72 Identities=15% Similarity=0.269 Sum_probs=47.0
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEe-cCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEe
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~va-G~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVAD 160 (507)
.....++++|||..++.-...+.|+.++..+ +....+. +.. .....+++++||. |.++.
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t---g~~~~~~~~~~----------------~~v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLET---GKPTVIERSRE----------------AMITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTT---CCEEEEEECSS----------------SCCCCEEECTTSCEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCC---CceEEeccCCC----------------CCccceEECCCCCeEEEEe
Confidence 3678999999998665555567999999873 4554443 211 1235789999998 43332
Q ss_pred C---------CCCeEEEEcCCC
Q 010579 161 T---------MNMAIRKISDTG 173 (507)
Q Consensus 161 s---------~N~rIrk~d~~G 173 (507)
. ....|++++..+
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTT
T ss_pred cCccccccCCCCCeEEEEECCC
Confidence 2 125788888544
No 261
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=75.03 E-value=67 Score=31.63 Aligned_cols=109 Identities=10% Similarity=0.029 Sum_probs=62.3
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.=..|+++++|.++++-+..+.|+.++... ++. ..+.+.. .. -.++..++.+.++-..
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~---~~~~~~~~~h~----------------~~--v~~~s~~~~~l~sgs~ 207 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQ---QKRLRNMTSHS----------------AR--VGSLSWNSYILSSGSR 207 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECCCS----------------SC--EEEEEEETTEEEEEET
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCC---CcEEEEEeCCC----------------Cc--eEEEeeCCCEEEEEeC
Confidence 346899999999888888889999999862 332 2222211 01 1233445677777666
Q ss_pred CCeEEEEcCCC----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 163 NMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 163 N~rIrk~d~~G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
...|+..+... +.++.+.. .....+. ...++.++++-...+.|+.++....
T Consensus 208 d~~i~~~d~~~~~~~~~~~~~h~-----------------~~~~~~~-~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 208 SGHIHHHDVRVAEHHVATLSGHS-----------------QEVCGLR-WAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp TSEEEEEETTSSSCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEESSCC
T ss_pred CCceeEeeecccceeeEEecccc-----------------cceeeee-ecCCCCeeeeeeccccceEEeeccc
Confidence 77777777332 33443211 1122333 3455555555555566666665543
No 262
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=74.50 E-value=11 Score=38.63 Aligned_cols=117 Identities=11% Similarity=-0.059 Sum_probs=65.2
Q ss_pred CeeEEEEcCCCcEEE----EeCCCCeEEEEeCCCCCCC-----c-cEEEecCCCCccccCCCCcccccCCCcceEEEcCC
Q 010579 84 EPFSVAVSPSGELLV----LDSENSNIYKISTSLSPYS-----R-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR 153 (507)
Q Consensus 84 ~P~gIaVd~dG~LYV----aDs~n~rI~ki~~~g~~~g-----~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d 153 (507)
....|+++++|.+++ +-...+.|+.++......+ + +..+. .. .|+ -....+|+++++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~---~~h---------~~~V~~v~~~p~ 160 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-LL---KDA---------GGMVIDMKWNPT 160 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-CC---CSG---------GGSEEEEEECSS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-cc---CCC---------CCceEEEEECCC
Confidence 478999999998666 5556678998876411000 0 00010 00 011 124678999987
Q ss_pred -CCEEEEeCCCCeEEEEcCC-CcEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 154 -GNIYIADTMNMAIRKISDT-GVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 154 -GnIYVADs~N~rIrk~d~~-GVstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
++++++=+.++.|+.+|.. +...+... ++ -....++++ .++|..+++-..++.|+.++.+
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~~~~~~------~~---------~~~v~~v~w-spdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVKVCATL------PS---------TVAVTSVCW-SPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEEEEEEE------CG---------GGCEEEEEE-CTTSSCEEEEETTSCEEEECTT
T ss_pred CCCEEEEEECCCeEEEEEcCCCcceeecc------CC---------CCceeEEEE-cCCCCEEEEEcCCCcEEEEccC
Confidence 7888776778889988843 32211100 00 012345664 4445544444456777777766
No 263
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=73.47 E-value=71 Score=31.17 Aligned_cols=74 Identities=12% Similarity=0.012 Sum_probs=44.5
Q ss_pred CcceEEEcCCCCEEEEeCCCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC--
Q 010579 144 HPKGLAVDDRGNIYIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-- 218 (507)
Q Consensus 144 ~P~GIaVd~dGnIYVADs~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~-- 218 (507)
...+++++++|+++++-+..+.|+.+|... +.++.+.. .....+++.+....|+++..
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-----------------~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN-----------------AAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS-----------------SCCCEEEECTTSTTEEEEECCT
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc-----------------ceEEEEEECCCCCCEEEEecCC
Confidence 456899999999877777778899999543 33332211 12345554333445555543
Q ss_pred CCCeEEEEECCCCcee
Q 010579 219 GNQAIREIQLHDDDCS 234 (507)
Q Consensus 219 gn~rIr~I~l~~~~~~ 234 (507)
..+.|+.+++....+.
T Consensus 282 ~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 282 MDKQIHFWNAATGARV 297 (401)
T ss_dssp TTCEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCCEE
Confidence 4667777776655543
No 264
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=72.13 E-value=1.2e+02 Score=33.08 Aligned_cols=118 Identities=11% Similarity=0.094 Sum_probs=70.4
Q ss_pred CCeeEEEEcCC--CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC--------
Q 010579 83 MEPFSVAVSPS--GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-------- 152 (507)
Q Consensus 83 ~~P~gIaVd~d--G~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~-------- 152 (507)
..-..++++++ |.++++-..++.|+.++...........+.+. -.....+++++
T Consensus 100 ~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~----------------~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC----------------SSCEEEEEECCCC------
T ss_pred CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC----------------CCceEEEEecCcccccccc
Confidence 35678899998 88888888889999998763211112222211 11344666666
Q ss_pred -----CCCEEEEeCCCCeEEEEcCC-C--c-EEEecCcccCCCCCCCCCccCccCCCCceEEEEcCC---CeEEEEeCCC
Q 010579 153 -----RGNIYIADTMNMAIRKISDT-G--V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS---CSLLVIDRGN 220 (507)
Q Consensus 153 -----dGnIYVADs~N~rIrk~d~~-G--V-stIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~---G~LyVaD~gn 220 (507)
+|.++++-+.++.|+.+|.. + . ..+.. . .+ .-....++++ .++ +.++++-...
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-~----~~---------h~~~V~~l~~-sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-L----EG---------HSDWVRDVAW-SPTVLLRSYLASVSQD 228 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE-E----CC---------CSSCEEEEEE-CCCCSSSEEEEEEESS
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeee-e----cC---------CCCcEEEEEe-ccCCCCCCEEEEEecC
Confidence 57777776677788888732 2 1 11110 0 00 0112346665 445 7777777778
Q ss_pred CeEEEEECCCC
Q 010579 221 QAIREIQLHDD 231 (507)
Q Consensus 221 ~rIr~I~l~~~ 231 (507)
+.|+.+++...
T Consensus 229 g~I~iwd~~~~ 239 (753)
T 3jro_A 229 RTCIIWTQDNE 239 (753)
T ss_dssp SCEEEEEESSS
T ss_pred CEEEEecCCCC
Confidence 88998888764
No 265
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=71.86 E-value=71 Score=30.50 Aligned_cols=26 Identities=15% Similarity=0.399 Sum_probs=18.8
Q ss_pred EEEEcCCCc-EEEEeCCCCeEEEEeCCC
Q 010579 87 SVAVSPSGE-LLVLDSENSNIYKISTSL 113 (507)
Q Consensus 87 gIaVd~dG~-LYVaDs~n~rI~ki~~~g 113 (507)
+++++|||. |+++. .+..|++++..+
T Consensus 85 ~~~~spdg~~l~~~~-~~~~l~~~d~~~ 111 (388)
T 3pe7_A 85 GGFLSPDDDALFYVK-DGRNLMRVDLAT 111 (388)
T ss_dssp SCEECTTSSEEEEEE-TTTEEEEEETTT
T ss_pred ceEEcCCCCEEEEEe-CCCeEEEEECCC
Confidence 457899986 55554 456899999873
No 266
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=70.61 E-value=46 Score=31.39 Aligned_cols=31 Identities=10% Similarity=-0.108 Sum_probs=18.9
Q ss_pred cceEEEcCCCCEEEEe-CC--------CCeEEEEcCCC-cEEE
Q 010579 145 PKGLAVDDRGNIYIAD-TM--------NMAIRKISDTG-VTTI 177 (507)
Q Consensus 145 P~GIaVd~dGnIYVAD-s~--------N~rIrk~d~~G-VstI 177 (507)
...+++++|| |+++- .. ..+|..++ .| +..+
T Consensus 173 ~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l 213 (347)
T 2gop_A 173 FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKM 213 (347)
T ss_dssp TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEE
T ss_pred cccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEe
Confidence 3467888888 55543 22 34788888 55 4444
No 267
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=69.64 E-value=90 Score=30.77 Aligned_cols=113 Identities=10% Similarity=0.010 Sum_probs=67.9
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..++++++|..+++-+..+.|+.++... ++.. .+.+. -.....++++ ++.+++=+.
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~---~~~~~~~~~h----------------~~~v~~~~~~--~~~l~s~s~ 370 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTTIRIWDLEN---GELMYTLQGH----------------TALVGLLRLS--DKFLVSAAA 370 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTT---TEEEEEECCC----------------SSCEEEEEEC--SSEEEEEET
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCC---CcEEEEEeCC----------------CCcEEEEEEc--CCEEEEEeC
Confidence 467899999999888888889999999862 3332 22111 1123466665 466666666
Q ss_pred CCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCceee
Q 010579 163 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 235 (507)
Q Consensus 163 N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~~~ 235 (507)
.+.|+.++... ...+..... .....++ ...++.++++-. .+.|+.+++....+..
T Consensus 371 dg~v~vwd~~~~~~~~~~~~~----------------~~~~~~~-~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 371 DGSIRGWDANDYSRKFSYHHT----------------NLSAITT-FYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp TSEEEEEETTTCCEEEEEECT----------------TCCCEEE-EEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CCcEEEEECCCCceeeeecCC----------------CCccEEE-EEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 77888888544 222211100 0112333 344555555544 6788888888776654
No 268
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=69.17 E-value=69 Score=29.27 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=63.9
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i-~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
=..|++.++|+++++-+..+.|+.++... ++. ..+.+.. ..-.++..++.+.++-...
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~---~~~~~~~~~h~------------------~~~~~~~~~~~~l~s~~~~ 128 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQ---QKRLRNMTSHS------------------ARVGSLSWNSYILSSGSRS 128 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEECCS------------------SCEEEEEEETTEEEEEETT
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCC---ceeEEEecCcc------------------ceEEEeecCCCEEEEEecC
Confidence 46899999999988888889999999862 332 2222211 1123444456666666666
Q ss_pred CeEEEEcCCC----cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 010579 164 MAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 164 ~rIrk~d~~G----VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~ 231 (507)
..++..+... +.++.+.. .....++ ...++.++++-...+.|+.+++...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 129 GHIHHHDVRVAEHHVATLSGHS-----------------QEVCGLR-WAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp SEEEEEETTSSSCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEESSCB
T ss_pred CceEeeecCCCceeEEEEcCcc-----------------CceEEEE-EcCCCCEEEEEecCcceeEEECCCC
Confidence 6666666332 23332211 1122333 4566666666666778888887654
No 269
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=69.15 E-value=17 Score=39.58 Aligned_cols=118 Identities=10% Similarity=0.072 Sum_probs=62.2
Q ss_pred eEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCC-CcceEEEcCCCCEEEEeCCC-
Q 010579 86 FSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMN-HPKGLAVDDRGNIYIADTMN- 163 (507)
Q Consensus 86 ~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn-~P~GIaVd~dGnIYVADs~N- 163 (507)
..+++.+||.+++++ .+.|+.++..+ +....+....... .++ ...+++++|||+..+.-+..
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~Spdg~~l~~~~~~~ 83 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEY---GNSSVFLENSTFD-----------EFGHSINDYSISPDGQFILLEYNYV 83 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTT---CCEEEEECTTTTT-----------TCCSCCCEEEECTTSSEEEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCC---CceEEEEechhhh-----------hhcccccceEECCCCCEEEEEECCe
Confidence 478899999888887 67999999873 4444443221000 011 22468889999832222221
Q ss_pred --------CeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCc--eEEEEcCCCeEEEEeCCCCeEEEEECCC
Q 010579 164 --------MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDF--DVVYVGSSCSLLVIDRGNQAIREIQLHD 230 (507)
Q Consensus 164 --------~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~--gIa~vd~~G~LyVaD~gn~rIr~I~l~~ 230 (507)
..+..+|..+ +..+.+.. +......+ +|. -||++ .+++||+.|...+.++++..++
T Consensus 84 ~~~r~~~~~~~~~~d~~~~~~~~l~~~~---------~~~~~~~~-SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKRQLITEERIP---------NNTQWVTW-SPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp ECSSSCEEEEEEEEETTTTEECCSSCCC---------TTEEEEEE-CSSTTCEEEE-ETTEEEEESSTTSCCEECCSCC
T ss_pred eeEEEccceEEEEEECCCCcEEEcccCC---------CcceeeEE-CCCCCEEEEE-ECCeEEEEECCCCceEEEcCCC
Confidence 3455666433 22221100 00111112 332 35554 4577888877666666665543
No 270
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=67.36 E-value=70 Score=29.85 Aligned_cols=70 Identities=10% Similarity=0.094 Sum_probs=44.3
Q ss_pred eeEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC--CCEEEEe
Q 010579 85 PFSVAVSP--SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR--GNIYIAD 160 (507)
Q Consensus 85 P~gIaVd~--dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d--GnIYVAD 160 (507)
-..|++.+ +|+++++-+..+.|+.++........+..+.+. -.....|++.++ |.++++=
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~g~~l~s~ 119 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH----------------SASVNSVQWAPHEYGPMLLVA 119 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC----------------SSCEEEEEECCGGGCSEEEEE
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC----------------CCceeEEEeCcCCCCcEEEEE
Confidence 35788865 488888888889999998763211112222211 113457888876 7777666
Q ss_pred CCCCeEEEEc
Q 010579 161 TMNMAIRKIS 170 (507)
Q Consensus 161 s~N~rIrk~d 170 (507)
+..+.|+.++
T Consensus 120 s~d~~v~~wd 129 (297)
T 2pm7_B 120 SSDGKVSVVE 129 (297)
T ss_dssp ETTSEEEEEE
T ss_pred ECCCcEEEEE
Confidence 6677788877
No 271
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=67.16 E-value=30 Score=36.79 Aligned_cols=72 Identities=10% Similarity=0.074 Sum_probs=40.3
Q ss_pred CeeEEEEcCCCcEEEEeCC---------CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCC
Q 010579 84 EPFSVAVSPSGELLVLDSE---------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 154 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~---------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG 154 (507)
....++++|||..++.-.. .+.|+.++..+ +....+.... +. -.....++++|||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~---~~~~~l~~~~----~~---------~~~~~~~~~SPdG 125 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH---GDPQSLDPPE----VS---------NAKLQYAGWGPKG 125 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS---CCCEECCCTT----CC---------SCCCSBCCBCSST
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC---CceEeccCCc----cc---------cccccccEECCCC
Confidence 3678999999984433222 26788888763 3332222110 00 0124567788888
Q ss_pred C-EEEEeCCCCeEEEEcCCC
Q 010579 155 N-IYIADTMNMAIRKISDTG 173 (507)
Q Consensus 155 n-IYVADs~N~rIrk~d~~G 173 (507)
+ |.++.. +.|++++..+
T Consensus 126 ~~la~~~~--~~i~~~~~~~ 143 (723)
T 1xfd_A 126 QQLIFIFE--NNIYYCAHVG 143 (723)
T ss_dssp TCEEEEET--TEEEEESSSS
T ss_pred CEEEEEEC--CeEEEEECCC
Confidence 6 433332 5688888543
No 272
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=65.29 E-value=1.1e+02 Score=30.09 Aligned_cols=70 Identities=16% Similarity=-0.011 Sum_probs=44.4
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEe-cCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~va-G~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
+.+-|+.++++.|-|+- .+.|+.++.. +|.+..+. ... + -..-..|+++++|+++++=+.
T Consensus 107 y~~~l~wS~~n~lAvgl--d~tV~lWd~~---tg~~~~~~~~~~-----~---------~~~V~sv~fspdg~~lasgs~ 167 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL--DNSVYLWSAS---SGDILQLLQMEQ-----P---------GEYISSVAWIKEGNYLAVGTS 167 (420)
T ss_dssp TCBCEEECTTSEEEEEE--TTEEEEEETT---TCCEEEEEECCS-----T---------TCCEEEEEECTTSSEEEEEET
T ss_pred cceeEEECCCCEEEEEe--CCEEEEEECC---CCCEEEEEEecC-----C---------CCcEEEEEECCCCCEEEEEEC
Confidence 34456776665444543 5789999876 34443322 111 0 123468999999998777777
Q ss_pred CCeEEEEcCC
Q 010579 163 NMAIRKISDT 172 (507)
Q Consensus 163 N~rIrk~d~~ 172 (507)
.+.|+.++..
T Consensus 168 Dg~v~iWd~~ 177 (420)
T 4gga_A 168 SAEVQLWDVQ 177 (420)
T ss_dssp TSCEEEEETT
T ss_pred CCeEEEEEcC
Confidence 8889999843
No 273
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=64.58 E-value=21 Score=38.08 Aligned_cols=73 Identities=8% Similarity=0.058 Sum_probs=43.8
Q ss_pred eeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEEEeC--
Q 010579 85 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT-- 161 (507)
Q Consensus 85 P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYVADs-- 161 (507)
+.++++.+||.++++. ..+.|+.++..+ +....+.... .. .. .....+++++||+ |.++..
T Consensus 18 ~~~~~~s~dg~~~~~~-~d~~i~~~~~~~---g~~~~~~~~~---~~--------~~-~~~~~~~~SpDg~~la~~~~~~ 81 (719)
T 1z68_A 18 TFFPNWISGQEYLHQS-ADNNIVLYNIET---GQSYTILSNR---TM--------KS-VNASNYGLSPDRQFVYLESDYS 81 (719)
T ss_dssp CCCCEESSSSEEEEEC-TTSCEEEEESSS---CCEEEEECHH---HH--------HT-TTCSEEEECTTSSEEEEEEEEE
T ss_pred CCccEECCCCeEEEEc-CCCCEEEEEcCC---CcEEEEEccc---cc--------cc-cceeeEEECCCCCeEEEEecCc
Confidence 3477889999765554 467899999873 4444443211 00 00 1245899999998 444322
Q ss_pred ------CCCeEEEEcCCC
Q 010579 162 ------MNMAIRKISDTG 173 (507)
Q Consensus 162 ------~N~rIrk~d~~G 173 (507)
....|++++.++
T Consensus 82 ~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp ECSSSCEEEEEEEEETTT
T ss_pred eeEEeecceEEEEEECCC
Confidence 135788888544
No 274
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=64.35 E-value=84 Score=28.51 Aligned_cols=110 Identities=14% Similarity=0.136 Sum_probs=61.1
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
.-..++++++|.++++-..++.|+.++......+. +..+.+. -.....+++ +++++++=+.
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~----------------~~~i~~~~~--~~~~l~~~~~ 122 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGH----------------QGNVCSLSF--QDGVVISGSW 122 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCC----------------SSCEEEEEE--ETTEEEEEET
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhc----------------ccCEEEEEe--cCCEEEEEeC
Confidence 46789999999988888888899988875322111 1111111 122346666 3556666666
Q ss_pred CCeEEEEcCCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEEC
Q 010579 163 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 228 (507)
Q Consensus 163 N~rIrk~d~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l 228 (507)
++.|+.++... +..+.+.. .....+++.+.++.++++-..++.|+.++.
T Consensus 123 d~~i~~~d~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~ 172 (313)
T 3odt_A 123 DKTAKVWKEGSLVYNLQAHN-----------------ASVWDAKVVSFSENKFLTASADKTIKLWQN 172 (313)
T ss_dssp TSEEEEEETTEEEEEEECCS-----------------SCEEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred CCCEEEEcCCcEEEecccCC-----------------CceeEEEEccCCCCEEEEEECCCCEEEEec
Confidence 77888888433 33332211 122344444434444444445566666663
No 275
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.20 E-value=1e+02 Score=29.30 Aligned_cols=71 Identities=7% Similarity=-0.037 Sum_probs=39.5
Q ss_pred eeEEEEcC-CCc-EEE-EeCCC----CeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-E
Q 010579 85 PFSVAVSP-SGE-LLV-LDSEN----SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-I 156 (507)
Q Consensus 85 P~gIaVd~-dG~-LYV-aDs~n----~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-I 156 (507)
...++++| +|. |++ ++... .+|+.++.++ +....+.... .-..+..+++++||. |
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~---~~~~~l~~~~--------------~~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG---SNVRKIKEHA--------------EGESCTHEFWIPDGSAM 252 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS---CCCEESSCCC--------------TTEEEEEEEECTTSSCE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCC---CceeEeeccC--------------CCccccceEECCCCCEE
Confidence 45778888 665 444 43222 5788888763 2222222110 001245689999997 5
Q ss_pred EEE-e-CCCCe--EEEEcCC
Q 010579 157 YIA-D-TMNMA--IRKISDT 172 (507)
Q Consensus 157 YVA-D-s~N~r--Irk~d~~ 172 (507)
+++ . .+... |++++..
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEEEEETTTCCEEEEEECTT
T ss_pred EEEecCCCCccceEEEEECC
Confidence 554 2 23444 9999853
No 276
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=63.64 E-value=55 Score=33.23 Aligned_cols=72 Identities=8% Similarity=0.065 Sum_probs=50.8
Q ss_pred CeeEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCC
Q 010579 84 EPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 162 (507)
Q Consensus 84 ~P~gIaVd~d-G~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~ 162 (507)
...+|+++|+ ++++++-+..+.|+.++... +.. .+. . .++ -.....++++++|+.+++=+.
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~---~~~-~~~-~----~~~---------~~~v~~v~wspdg~~lasgs~ 212 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTE---TVK-VCA-T----LPS---------TVAVTSVCWSPKGKQLAVGKQ 212 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESS---SEE-EEE-E----ECG---------GGCEEEEEECTTSSCEEEEET
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCC---Ccc-eee-c----cCC---------CCceeEEEEcCCCCEEEEEcC
Confidence 5779999997 78888888889999998762 211 111 0 010 124678999999986665557
Q ss_pred CCeEEEEcCCC
Q 010579 163 NMAIRKISDTG 173 (507)
Q Consensus 163 N~rIrk~d~~G 173 (507)
++.|+.++..+
T Consensus 213 dg~v~iwd~~~ 223 (434)
T 2oit_A 213 NGTVVQYLPTL 223 (434)
T ss_dssp TSCEEEECTTC
T ss_pred CCcEEEEccCC
Confidence 78899999775
No 277
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=63.36 E-value=1e+02 Score=29.24 Aligned_cols=112 Identities=11% Similarity=0.043 Sum_probs=66.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCC---------
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG--------- 154 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dG--------- 154 (507)
.-..|+++|+|.++++-...+.|+.++..+ ......... .++ -.....+++.+++
T Consensus 120 ~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~----~~~~~~~~~---~~~---------~~~v~~~~~~~~~~~~~~~~~~ 183 (343)
T 2xzm_R 120 EVYSVAFSPDNRQILSAGAEREIKLWNILG----ECKFSSAEK---ENH---------SDWVSCVRYSPIMKSANKVQPF 183 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSCEEEEESSS----CEEEECCTT---TSC---------SSCEEEEEECCCCCSCSCCCSS
T ss_pred cEEEEEECCCCCEEEEEcCCCEEEEEeccC----Cceeeeecc---cCC---------CceeeeeeeccccccccccCCC
Confidence 456889999998888777788999998752 111111100 010 1123355555554
Q ss_pred -CEEEEeCCCCeEEEEcCCC--cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECC
Q 010579 155 -NIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 229 (507)
Q Consensus 155 -nIYVADs~N~rIrk~d~~G--VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~ 229 (507)
.++++=+..+.|+.++..+ +.++.+-. .....+++ .+++.++++-...+.|+.+++.
T Consensus 184 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~-----------------~~v~~~~~-s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 184 APYFASVGWDGRLKVWNTNFQIRYTFKAHE-----------------SNVNHLSI-SPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CCEEEEEETTSEEEEEETTTEEEEEEECCS-----------------SCEEEEEE-CTTSSEEEEEETTCEEEEEESS
T ss_pred CCEEEEEcCCCEEEEEcCCCceeEEEcCcc-----------------ccceEEEE-CCCCCEEEEEcCCCeEEEEECC
Confidence 5666666677888888655 22332110 12345554 5677777776677888888873
No 278
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=63.00 E-value=59 Score=30.60 Aligned_cols=55 Identities=16% Similarity=0.275 Sum_probs=33.0
Q ss_pred eeEEEEcCCCc-EEEE-eC---CCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC-EEE
Q 010579 85 PFSVAVSPSGE-LLVL-DS---ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYI 158 (507)
Q Consensus 85 P~gIaVd~dG~-LYVa-Ds---~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn-IYV 158 (507)
...++++|||. |+++ +. ...+|++++..+ +....+.... . ..++++++||+ |++
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~---g~~~~l~~~~----------------~-~~~~~wspdg~~l~~ 120 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLET---LSSKKILEAK----------------N-IRSLEWNEDSRKLLI 120 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT---TEEEEEEEES----------------E-EEEEEECTTSSEEEE
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCC---CceEEEEcCC----------------C-ccceeECCCCCEEEE
Confidence 55789999996 4443 32 234688888763 4433332211 1 45788888887 555
Q ss_pred E
Q 010579 159 A 159 (507)
Q Consensus 159 A 159 (507)
+
T Consensus 121 ~ 121 (347)
T 2gop_A 121 V 121 (347)
T ss_dssp E
T ss_pred E
Confidence 5
No 279
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=59.55 E-value=1.1e+02 Score=34.78 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=21.3
Q ss_pred CcceEEEcCCCCEEEEeCCCCeEEEEcCC
Q 010579 144 HPKGLAVDDRGNIYIADTMNMAIRKISDT 172 (507)
Q Consensus 144 ~P~GIaVd~dGnIYVADs~N~rIrk~d~~ 172 (507)
.+..+++++||..++.-...+.|+.+|..
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECC
Confidence 45789999999855444456689999953
No 280
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=57.51 E-value=21 Score=39.16 Aligned_cols=81 Identities=20% Similarity=0.234 Sum_probs=53.3
Q ss_pred CCeeEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccC-CCcceEEEcCCCCEEEEe
Q 010579 83 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARM-NHPKGLAVDDRGNIYIAD 160 (507)
Q Consensus 83 ~~P~gIaVd~dG~-LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~f-n~P~GIaVd~dGnIYVAD 160 (507)
.+|+|+-++|||. ++++.....+|-+++... ....+.+..... .+-...+..+ -.|.-.++|++|+.|.+=
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k----~~~~~~~k~~~~---~~~~~ae~e~GlGPlHt~Fd~~G~aYTtl 395 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK----LPDLFAGKLADP---RDVIVGEPELGLGPLHTTFDGRGNAYTTL 395 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGG----HHHHHTTCCSCG---GGGEEECCBCCSCEEEEEECSSSEEEEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh----hhhhhhccccCc---ccceEeeccCCCcccEEEECCCCceEeee
Confidence 7999999999996 888888888999888641 111111110000 0000000111 269999999999999998
Q ss_pred CCCCeEEEEc
Q 010579 161 TMNMAIRKIS 170 (507)
Q Consensus 161 s~N~rIrk~d 170 (507)
.....|.|.+
T Consensus 396 fidSqvvkWn 405 (638)
T 3sbq_A 396 FIDSQVVKWN 405 (638)
T ss_dssp TTTTEEEEEE
T ss_pred eecceEEEEe
Confidence 8888898877
No 281
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=56.00 E-value=1.4e+02 Score=28.62 Aligned_cols=27 Identities=26% Similarity=0.430 Sum_probs=19.4
Q ss_pred cceEEEcCCCCEEEEeCCCCeEEEEcC-CC
Q 010579 145 PKGLAVDDRGNIYIADTMNMAIRKISD-TG 173 (507)
Q Consensus 145 P~GIaVd~dGnIYVADs~N~rIrk~d~-~G 173 (507)
+.+++++ ++.||+++. ++.|..+|. +|
T Consensus 270 ~~~~~~~-~~~l~~~~~-~g~l~~~d~~tG 297 (376)
T 3q7m_A 270 VNDFIVD-GNRIYLVDQ-NDRVMALTIDGG 297 (376)
T ss_dssp EEEEEEE-TTEEEEEET-TCCEEEEETTTC
T ss_pred CCCceEE-CCEEEEEcC-CCeEEEEECCCC
Confidence 4466666 678999985 457899984 55
No 282
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=55.31 E-value=1.1e+02 Score=30.07 Aligned_cols=129 Identities=10% Similarity=-0.013 Sum_probs=69.0
Q ss_pred CeeEEEEcC--------CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCC
Q 010579 84 EPFSVAVSP--------SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 155 (507)
Q Consensus 84 ~P~gIaVd~--------dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGn 155 (507)
.=..|++.| ||.++++-+..+.|+.++.... +.+..+.+.. .....+++.|++.
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~~----------------~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPLS----------------SPGISVQFRPSNP 199 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEECS----------------SCEEEEEEETTEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCCC----------------CCcEEEEECCCCC
Confidence 345778875 7889999888899999986421 2222222211 2345789998764
Q ss_pred -EEEEeCCCCeEEEEcCC-C--cEEEecCcccCC--------CCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeE
Q 010579 156 -IYIADTMNMAIRKISDT-G--VTTIAGGKWSRG--------VGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAI 223 (507)
Q Consensus 156 -IYVADs~N~rIrk~d~~-G--VstIaGG~~g~~--------~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rI 223 (507)
++++=..++.|+.+|.. + ............ ...............-..+.+...++..+++-...+.|
T Consensus 200 ~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 200 NQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp EEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred ceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 56665667889988833 2 111111000000 00000000011122344566666778877787888888
Q ss_pred EEEECCC
Q 010579 224 REIQLHD 230 (507)
Q Consensus 224 r~I~l~~ 230 (507)
+..++..
T Consensus 280 ~vwd~~~ 286 (393)
T 4gq1_A 280 LRWNLFA 286 (393)
T ss_dssp EEEEC--
T ss_pred EEEECcc
Confidence 8888754
No 283
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=55.00 E-value=33 Score=33.84 Aligned_cols=109 Identities=16% Similarity=0.097 Sum_probs=65.4
Q ss_pred CCcEEEEeCCCCeEEEEeCCCCCCCccE--EEecCCCCccccCCCCcccccCCCcceEEEcC--------CCCEEEEeCC
Q 010579 93 SGELLVLDSENSNIYKISTSLSPYSRPK--LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--------RGNIYIADTM 162 (507)
Q Consensus 93 dG~LYVaDs~n~rI~ki~~~g~~~g~i~--~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~--------dGnIYVADs~ 162 (507)
++.+.++-+..+.|+.++... +... ...+. ..|+ -+.-+.|++.+ ||+++++=+.
T Consensus 100 ~~~~las~~~d~~v~lw~~~~---~~~~~~~~~~~---~~gH---------~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKN---ETIITQHVLGG---KSGH---------HNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEET---TEEEEEEEECT---TTSC---------SSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred CCCEEEEEeCCCcEEEEECCC---Cccceeeeecc---cCCC---------CCceEEEEEccccccccCCCCCEEEEEEC
Confidence 455666666778888887652 2221 12222 1222 12345788875 7888888777
Q ss_pred CCeEEEEcC--CC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 163 NMAIRKISD--TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 163 N~rIrk~d~--~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
.+.|++.|. .+ +..+.+.. .....|++.+.+.+++++-...+.|+.+++....+
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~-----------------~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLS-----------------SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECS-----------------SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred CCeEEEEECCCCceeeeecCCC-----------------CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 888998883 33 33332211 12346776655556777777788999999876544
No 284
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=54.22 E-value=1.7e+02 Score=28.74 Aligned_cols=62 Identities=13% Similarity=0.161 Sum_probs=36.8
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeEE
Q 010579 89 AVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIR 167 (507)
Q Consensus 89 aVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rIr 167 (507)
++..+|+++++-+..+.|+.++... +... .+.+. . .....++++ ++++++-+.++.|+
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~---~~~~~~~~~h--------~--------~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVT---GKCLRTLVGH--------T--------GGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTT---CCEEEECCCC--------S--------SCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EEEEcCCEEEEEECCCcEEEEECCC---CcEEEEEcCC--------C--------CCEEEEEec--CCEEEEEeCCCeEE
Confidence 3445677778777889999999762 3322 22111 0 123456665 45566555667788
Q ss_pred EEcC
Q 010579 168 KISD 171 (507)
Q Consensus 168 k~d~ 171 (507)
.++.
T Consensus 183 vwd~ 186 (445)
T 2ovr_B 183 VWNA 186 (445)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8874
No 285
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=52.95 E-value=1.7e+02 Score=30.71 Aligned_cols=116 Identities=11% Similarity=0.010 Sum_probs=69.0
Q ss_pred CeeEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceE--EEcCCC-CEEEEe
Q 010579 84 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGL--AVDDRG-NIYIAD 160 (507)
Q Consensus 84 ~P~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GI--aVd~dG-nIYVAD 160 (507)
.-..+++.+++ .+++-+.++.|+.++..... ....++.+.. ..-..| ++.++| +++++=
T Consensus 268 ~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-~~~~~~~~H~----------------~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-VPSFYDQVHD----------------SYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp CEEEEEESSSS-EEEEEETTSEEEEEETTBCS-SCSEEEECSS----------------SCEEEEEEECCTTSCCEEEEE
T ss_pred CEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-CceEEeeccc----------------ccEEEEEEEcCCCCCeEEEEe
Confidence 34578887764 55666778999999986211 0111222211 123466 456777 888888
Q ss_pred CCCCeEEEEcCCC---cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 010579 161 TMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 233 (507)
Q Consensus 161 s~N~rIrk~d~~G---VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~gn~rIr~I~l~~~~~ 233 (507)
+..+.|+.+|... +.++.+... + .....|++ .+++..+++-...+.|+.+++....|
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~--------~-------~~v~~v~f-sp~~~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFR--------G-------SNLVPVVY-CPQIYSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECS--------C-------CSCCCEEE-ETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred ccCCeEEEEECCCCCcccccccccc--------c-------CcccceEe-CCCcCeEEEeCCCCcEEEEECccccc
Confidence 8888999999533 334432110 0 01245665 45566677766777888888876555
No 286
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=52.04 E-value=28 Score=37.86 Aligned_cols=27 Identities=15% Similarity=0.320 Sum_probs=16.6
Q ss_pred eEEEEcCCCcEEEEeCCC---------CeEEEEeCC
Q 010579 86 FSVAVSPSGELLVLDSEN---------SNIYKISTS 112 (507)
Q Consensus 86 ~gIaVd~dG~LYVaDs~n---------~rI~ki~~~ 112 (507)
.+++++|||...+.-+.. +.|+.++..
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~ 100 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN 100 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECC
Confidence 468899999833332221 456677776
No 287
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=50.94 E-value=1.3e+02 Score=30.76 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=43.8
Q ss_pred eeEEEEcCCC-cEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCC
Q 010579 85 PFSVAVSPSG-ELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 163 (507)
Q Consensus 85 P~gIaVd~dG-~LYVaDs~n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N 163 (507)
++.|++ || .|+|+ .++.|..++...-. ....+-.... .....++..|+=++++.+|.|++.|-.+
T Consensus 90 V~~l~f--d~~~L~v~--~~~~l~v~dv~sl~--~~~~~~~~~~--------~v~~i~~~~p~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS--TRNALYSLDLEELS--EFRTVTSFEK--------PVFQLKNVNNTLVILNSVNDLSALDLRT 155 (388)
T ss_dssp EEEEEE--ETTEEEEE--ESSEEEEEESSSTT--CEEEEEECSS--------CEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred eeEEEE--CCCEEEEE--cCCcEEEEEchhhh--ccCccceeec--------ceeeEEecCCCEEEEECCCCEEEEEccC
Confidence 889999 44 47777 45799999865221 1111111100 0112244556645556788899998876
Q ss_pred CeEEEEcCCCcEEEec
Q 010579 164 MAIRKISDTGVTTIAG 179 (507)
Q Consensus 164 ~rIrk~d~~GVstIaG 179 (507)
.....+. .+|+.+++
T Consensus 156 ~~~~~~~-~~Vs~v~W 170 (388)
T 1xip_A 156 KSTKQLA-QNVTSFDV 170 (388)
T ss_dssp CCEEEEE-ESEEEEEE
T ss_pred Ccccccc-CCceEEEE
Confidence 5543322 24555543
No 288
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=48.35 E-value=1.9e+02 Score=27.68 Aligned_cols=46 Identities=7% Similarity=-0.026 Sum_probs=26.8
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceeeCCCCCccceEEEEecceeEEe
Q 010579 210 SCSLLVIDRGNQAIREIQLHDDDCSDNYDDTFHLGIFVLVAAAFFGY 256 (507)
Q Consensus 210 ~G~LyVaD~gn~rIr~I~l~~~~~~~~~~~G~p~gIa~~~~a~~~gy 256 (507)
++.||+... ++.|..+++.++........+...++++..+..|++.
T Consensus 239 ~~~v~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~~ 284 (376)
T 3q7m_A 239 NGVVFALAY-NGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVD 284 (376)
T ss_dssp TTEEEEECT-TSCEEEEETTTCCEEEEECCCCEEEEEEETTEEEEEE
T ss_pred CCEEEEEec-CcEEEEEECCCCcEEeeccCCCCCCceEECCEEEEEc
Confidence 567777753 5678888887665554333333445555555555543
No 289
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=47.31 E-value=1.6e+02 Score=31.91 Aligned_cols=26 Identities=0% Similarity=-0.080 Sum_probs=14.7
Q ss_pred cCCCeEEEEeCCCCeEEEEECCCCcee
Q 010579 208 GSSCSLLVIDRGNQAIREIQLHDDDCS 234 (507)
Q Consensus 208 d~~G~LyVaD~gn~rIr~I~l~~~~~~ 234 (507)
..++.||+. ...+.|+.|+..+..+.
T Consensus 486 ~~g~~v~~g-~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 486 TAGNVVFQG-TADGRLVAYHAATGEKL 511 (677)
T ss_dssp ETTTEEEEE-CTTSEEEEEETTTCCEE
T ss_pred eCCCEEEEE-CCCCcEEEEECCCCcee
Confidence 344555555 44566666666655543
No 290
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=46.55 E-value=1.4e+02 Score=31.84 Aligned_cols=113 Identities=9% Similarity=0.044 Sum_probs=58.5
Q ss_pred eEEEEcCCCc-EEEEeCC------------CCeEEEEeCCCCCCCccEEEecCCCCccccCCCCcccccCCCcceEEEcC
Q 010579 86 FSVAVSPSGE-LLVLDSE------------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD 152 (507)
Q Consensus 86 ~gIaVd~dG~-LYVaDs~------------n~rI~ki~~~g~~~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~ 152 (507)
.++++++||. |+++... ..+|++++..+.... ..++.... +. -..-.++++++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-~~lv~~~~-------~~------~~~~~~~~~Sp 236 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-DTVVHERT-------GD------PTTFLQSDLSR 236 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-CEEEECCC-------CC------TTCEEEEEECT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-ceEEEecC-------CC------CEEEEEEEECC
Confidence 5789999987 4444331 345888887632211 12222211 00 01224788999
Q ss_pred CCC-EEEE--eC-CCCeEEEEcC-CC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCCeEEEEeC---CCCeE
Q 010579 153 RGN-IYIA--DT-MNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR---GNQAI 223 (507)
Q Consensus 153 dGn-IYVA--Ds-~N~rIrk~d~-~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G~LyVaD~---gn~rI 223 (507)
||. |+++ +. .+..|+.++. ++ +..+..... .....+. .+++ ||+... .+.+|
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-----------------~~~~~~~-~~g~-l~~~s~~~~~~~~l 297 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-----------------AKYEVHA-WKDR-FYVLTDEGAPRQRV 297 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS-----------------CCEEEEE-ETTE-EEEEECTTCTTCEE
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC-----------------ceEEEEe-cCCc-EEEEECCCCCCCEE
Confidence 997 4433 22 3457888875 33 555543210 0112222 2333 655533 46788
Q ss_pred EEEECCCC
Q 010579 224 REIQLHDD 231 (507)
Q Consensus 224 r~I~l~~~ 231 (507)
..+++++.
T Consensus 298 ~~~d~~~~ 305 (695)
T 2bkl_A 298 FEVDPAKP 305 (695)
T ss_dssp EEEBTTBC
T ss_pred EEEeCCCC
Confidence 88887654
No 291
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=44.74 E-value=1.8e+02 Score=31.51 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=11.8
Q ss_pred cCCCcEEEEeCCCCeEE
Q 010579 91 SPSGELLVLDSENSNIY 107 (507)
Q Consensus 91 d~dG~LYVaDs~n~rI~ 107 (507)
+.+|.||+.|..+++++
T Consensus 321 ~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 321 PKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCCEe
Confidence 34677888887776655
No 292
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=43.65 E-value=2.4e+02 Score=27.54 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=13.0
Q ss_pred CCCEEEEeCCCCeEEEEcC
Q 010579 153 RGNIYIADTMNMAIRKISD 171 (507)
Q Consensus 153 dGnIYVADs~N~rIrk~d~ 171 (507)
+++++++-+.++.|+.+|.
T Consensus 328 ~~~~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 328 KDNILVSGNADSTVKIWDI 346 (445)
T ss_dssp ETTEEEEEETTSCEEEEET
T ss_pred eCCEEEEEeCCCeEEEEEC
Confidence 4566666666777888883
No 293
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=43.29 E-value=36 Score=36.29 Aligned_cols=64 Identities=11% Similarity=0.032 Sum_probs=38.6
Q ss_pred eeEEEEcCCCcEE-EEeC--------CCCeEEEEeCCCCCCCcc---EEEecCCCCccccCCCCcccccCCCcceEEEcC
Q 010579 85 PFSVAVSPSGELL-VLDS--------ENSNIYKISTSLSPYSRP---KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD 152 (507)
Q Consensus 85 P~gIaVd~dG~LY-VaDs--------~n~rI~ki~~~g~~~g~i---~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~ 152 (507)
...++++|||..+ ++.. ..+.|+.++..+ +.. ..+ -.....++++|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~---g~~~~~~~l-------------------~~~~~~~~~SP 119 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN---GEFVRGNEL-------------------PRPIQYLCWSP 119 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT---TEECCSSCC-------------------CSSBCCEEECS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC---Cccccceec-------------------CcccccceECC
Confidence 4588999999833 3321 136888888763 222 110 01245688999
Q ss_pred CCC-EEEEeCCCCeEEEEcCC
Q 010579 153 RGN-IYIADTMNMAIRKISDT 172 (507)
Q Consensus 153 dGn-IYVADs~N~rIrk~d~~ 172 (507)
||+ |.++. ++.|++++..
T Consensus 120 DG~~la~~~--~~~i~~~~~~ 138 (719)
T 1z68_A 120 VGSKLAYVY--QNNIYLKQRP 138 (719)
T ss_dssp STTCEEEEE--TTEEEEESST
T ss_pred CCCEEEEEE--CCeEEEEeCC
Confidence 997 44443 4578888853
No 294
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=42.57 E-value=3.4e+02 Score=28.89 Aligned_cols=27 Identities=11% Similarity=0.102 Sum_probs=18.0
Q ss_pred cceEEEcCCCC-EEEE-eCC---CCeEEEEcC
Q 010579 145 PKGLAVDDRGN-IYIA-DTM---NMAIRKISD 171 (507)
Q Consensus 145 P~GIaVd~dGn-IYVA-Ds~---N~rIrk~d~ 171 (507)
..++++++||. |+++ ... +..|+.++.
T Consensus 235 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~ 266 (710)
T 2xdw_A 235 MGGAELSDDGRYVLLSIREGCDPVNRLWYCDL 266 (710)
T ss_dssp EEEEEECTTSCEEEEEEECSSSSCCEEEEEEG
T ss_pred EEEEEEcCCCCEEEEEEEccCCCccEEEEEEC
Confidence 35789999998 4443 222 568888873
No 295
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=41.88 E-value=2e+02 Score=26.03 Aligned_cols=68 Identities=18% Similarity=0.062 Sum_probs=44.1
Q ss_pred EEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCe
Q 010579 87 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMA 165 (507)
Q Consensus 87 gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~r 165 (507)
-|+.++++-|-++ ..+.|+.++.. +++.. ++.+.. + -..-..|+++++|+++++=+..+.
T Consensus 30 ~l~WS~~~~lAvg--~D~tV~iWd~~---tg~~~~~~~~~~-----~---------~~~V~~v~~~~~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 30 LVDWSSGNVLAVA--LDNSVYLWSAS---SGDILQLLQMEQ-----P---------GEYISSVAWIKEGNYLAVGTSSAE 90 (318)
T ss_dssp CEEECTTSEEEEE--ETTEEEEEETT---TCCEEEEEECCS-----T---------TCCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEECCCCEEEEE--eCCEEEEEECC---CCCEEEEEEecC-----C---------CCeEEEEEECCCCCEEEEEECCCc
Confidence 4778777644443 35789999976 34433 232211 0 123468999999998888777888
Q ss_pred EEEEcCCC
Q 010579 166 IRKISDTG 173 (507)
Q Consensus 166 Irk~d~~G 173 (507)
|+..+...
T Consensus 91 v~iw~~~~ 98 (318)
T 4ggc_A 91 VQLWDVQQ 98 (318)
T ss_dssp EEEEETTT
T ss_pred EEEeecCC
Confidence 99998443
No 296
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=40.83 E-value=2.7e+02 Score=27.24 Aligned_cols=62 Identities=11% Similarity=0.113 Sum_probs=37.8
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCCeEE
Q 010579 89 AVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIR 167 (507)
Q Consensus 89 aVd~dG~LYVaDs~n~rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~rIr 167 (507)
++..+|..+++-..++.|+.++... +... .+.+.. .....+++ +|+++++-+.++.|+
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~---~~~~~~~~~h~----------------~~v~~l~~--~~~~l~sg~~dg~i~ 196 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNT---LECKRILTGHT----------------GSVLCLQY--DERVIITGSSDSTVR 196 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSS---CCEEEEECCCS----------------SCEEEEEC--CSSEEEEEETTSCEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCC---CeEEEEEcCCC----------------CcEEEEEE--CCCEEEEEcCCCeEE
Confidence 5556788888877888999998762 3322 222211 11234444 566666666677788
Q ss_pred EEcC
Q 010579 168 KISD 171 (507)
Q Consensus 168 k~d~ 171 (507)
+++.
T Consensus 197 vwd~ 200 (435)
T 1p22_A 197 VWDV 200 (435)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8873
No 297
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=40.15 E-value=2.1e+02 Score=25.81 Aligned_cols=128 Identities=14% Similarity=0.080 Sum_probs=68.6
Q ss_pred CeeEEEEcCC--CcEEEEeCCCCeEEEEeCCCCC-CCccEEEecCCCCccccCCCCcccccCCCcceEEEcCC---CCEE
Q 010579 84 EPFSVAVSPS--GELLVLDSENSNIYKISTSLSP-YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR---GNIY 157 (507)
Q Consensus 84 ~P~gIaVd~d--G~LYVaDs~n~rI~ki~~~g~~-~g~i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~d---GnIY 157 (507)
....|++.++ |.++++-...+.|+.++..... ...+..-.... . -.............+++.++ ++++
T Consensus 112 ~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 112 SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK--V----LSIPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE--S----CSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc--c----cccccCCcccceeEEEeccCCCCCcEE
Confidence 5678999998 8888887778999999975322 11111100000 0 00001122345678888886 7766
Q ss_pred EEeCCCCeEEEEc-CCC-cEEEecCcccCCCCCCCCCccCccCCCCceEEEEcCCC----eEEEEeCCCCeEEEEECCCC
Q 010579 158 IADTMNMAIRKIS-DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC----SLLVIDRGNQAIREIQLHDD 231 (507)
Q Consensus 158 VADs~N~rIrk~d-~~G-VstIaGG~~g~~~G~~dg~~~~a~f~~P~gIa~vd~~G----~LyVaD~gn~rIr~I~l~~~ 231 (507)
++-..++.+...+ ..+ +..+.-- .+ .-....++++ .+++ .++++-...+.|+.+++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------h~~~i~~~~~-~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 186 AVSALEQAIIYQRGKDGKLHVAAKL-----PG---------HKSLIRSISW-APSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEEC-----CC---------CCSCEEEEEE-CCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred EEecCCCcEEEEccCCCceeeeeec-----CC---------CCcceeEEEE-CCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 6555555554444 333 2222110 00 0012345664 4555 67777667788888887654
Q ss_pred c
Q 010579 232 D 232 (507)
Q Consensus 232 ~ 232 (507)
.
T Consensus 251 ~ 251 (351)
T 3f3f_A 251 L 251 (351)
T ss_dssp C
T ss_pred c
Confidence 3
No 298
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=39.48 E-value=53 Score=34.62 Aligned_cols=69 Identities=7% Similarity=0.061 Sum_probs=47.5
Q ss_pred eEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCccccCCCCcccccCCCcceEEEcCCCCEEEEeCCCC
Q 010579 86 FSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 164 (507)
Q Consensus 86 ~gIaVd~dG~LYVaDs~n~rI~ki~~~g~~~g~-i~~vaG~~~G~~G~~dG~~~~a~fn~P~GIaVd~dGnIYVADs~N~ 164 (507)
..|+++|+|..+++-...+.|+.++... +. +.++.|. ......|+++++|.++++=+..+
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~---~~~~~~l~gH----------------~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRA---AFAVHPLVSR----------------ETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTC---TTCCEEEEEC----------------SSCEEEEECCSSCCBCEEEETTT
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcc---cccceeeecC----------------CCceEEEEeCCCCCeEEEEECCC
Confidence 4688888888888777777888887652 22 2333322 12456899999998877777778
Q ss_pred eEEEEcCCC
Q 010579 165 AIRKISDTG 173 (507)
Q Consensus 165 rIrk~d~~G 173 (507)
.|+..+..+
T Consensus 420 tv~lwd~~~ 428 (524)
T 2j04_B 420 SLIITNAAR 428 (524)
T ss_dssp EEECCBSCS
T ss_pred EEEEEechH
Confidence 888887543
No 299
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=39.17 E-value=2e+02 Score=30.74 Aligned_cols=29 Identities=17% Similarity=0.040 Sum_probs=20.1
Q ss_pred eeEEEEcCCCcE--EEEeCCC---CeEEEEeCCC
Q 010579 85 PFSVAVSPSGEL--LVLDSEN---SNIYKISTSL 113 (507)
Q Consensus 85 P~gIaVd~dG~L--YVaDs~n---~rI~ki~~~g 113 (507)
-.+++++|||.. |..+... ..|+.++..+
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 347889999983 4444332 5899999873
No 300
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=35.25 E-value=1.8e+02 Score=23.69 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=18.6
Q ss_pred CCeeEEEEcCCCcEEEEeCCCCeEE
Q 010579 83 MEPFSVAVSPSGELLVLDSENSNIY 107 (507)
Q Consensus 83 ~~P~gIaVd~dG~LYVaDs~n~rI~ 107 (507)
..+..+.+..||+|.+.|..+..|.
T Consensus 50 ~~~~~L~l~~dGnLvL~d~~~~~vW 74 (105)
T 4h3o_A 50 KSGCSAVLQSDGNFVVYDSSGRSLW 74 (105)
T ss_dssp CCSCEEEECTTSCEEEECTTCCEEE
T ss_pred CccEEEEEeCCccEEEECCCcEEEE
Confidence 3566788999999999887655443
No 301
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=31.15 E-value=9.8 Score=42.16 Aligned_cols=11 Identities=27% Similarity=0.280 Sum_probs=5.4
Q ss_pred cCCCcccChhhh
Q 010579 391 YHPYTIKDLDKR 402 (507)
Q Consensus 391 ~~~~~~~~~~~~ 402 (507)
|||-. +||+..
T Consensus 32 ~~~~~-~~~~~~ 42 (727)
T 4b8c_D 32 LHPHL-DDPSLL 42 (727)
T ss_dssp TSGGG-TSCCCT
T ss_pred ccCCC-CCchhc
Confidence 55543 455544
No 302
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=31.03 E-value=3.7e+02 Score=27.19 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=50.2
Q ss_pred EcCCC--cEEEEeCCCC--eEEEEeCCCCCCCccE-EEecCCCCccccCCCCcccccCCCcc-eEEEcCCCCEEEEeCCC
Q 010579 90 VSPSG--ELLVLDSENS--NIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPK-GLAVDDRGNIYIADTMN 163 (507)
Q Consensus 90 Vd~dG--~LYVaDs~n~--rI~ki~~~g~~~g~i~-~vaG~~~G~~G~~dG~~~~a~fn~P~-GIaVd~dGnIYVADs~N 163 (507)
++.+| .||..+...+ .|..++++ .+++. .+.=..+|..| +..+. ++-+..+..|||.+...
T Consensus 34 ~~~~~k~yL~~~N~~~~~~~i~~iDL~---~~kl~k~i~~ekEGPNg----------i~~~~~~~~i~~~DsI~i~~~~~ 100 (369)
T 3s9j_A 34 FEENGKEYLHFENTQKSLYDIVIFDIE---NQQIAKRIPLHKTGPNG----------LPAVFGSRPSPDSQYILVAQNNI 100 (369)
T ss_dssp EEETTEEEEEEEECSTTCCEEEEEETT---TTEEEEEEECBSSSTTB----------CTTCCCEEESSSTTSEEEEEGGG
T ss_pred EecCCcEEEEEeCCCCCcCcEEEEECC---CCceeeeeccccCCCCC----------cccceeeEEecCCCEEEEEeCCc
Confidence 33455 4888888888 99999997 24332 22211122222 34563 57777888999999999
Q ss_pred CeEEEEcCCC--cEEE
Q 010579 164 MAIRKISDTG--VTTI 177 (507)
Q Consensus 164 ~rIrk~d~~G--VstI 177 (507)
.+|..|+..| +..+
T Consensus 101 ~~i~l~n~~G~~~~k~ 116 (369)
T 3s9j_A 101 SRLSSINSQGEIIRNY 116 (369)
T ss_dssp TEEEEECTTCCEEEEE
T ss_pred ceEEEECCCceEEEEE
Confidence 9999999998 4444
No 303
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=30.40 E-value=5.4e+02 Score=27.67 Aligned_cols=21 Identities=14% Similarity=0.191 Sum_probs=15.0
Q ss_pred CCCCEEEEeCCCCeEEEEcC-CC
Q 010579 152 DRGNIYIADTMNMAIRKISD-TG 173 (507)
Q Consensus 152 ~dGnIYVADs~N~rIrk~d~-~G 173 (507)
.+|.+|++ +..+.++.+|. +|
T Consensus 487 ~g~~v~~g-~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 487 AGNVVFQG-TADGRLVAYHAATG 508 (677)
T ss_dssp TTTEEEEE-CTTSEEEEEETTTC
T ss_pred CCCEEEEE-CCCCcEEEEECCCC
Confidence 45567777 56788999994 45
No 304
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=27.54 E-value=6e+02 Score=27.24 Aligned_cols=15 Identities=7% Similarity=-0.106 Sum_probs=10.6
Q ss_pred CeEEEEECCCCceee
Q 010579 221 QAIREIQLHDDDCSD 235 (507)
Q Consensus 221 ~rIr~I~l~~~~~~~ 235 (507)
+.|..+++.++....
T Consensus 438 g~l~A~D~~tG~~~W 452 (668)
T 1kv9_A 438 GALLAWDPVKQKAAW 452 (668)
T ss_dssp EEEEEEETTTTEEEE
T ss_pred ceEEEEeCCCCcEEE
Confidence 678888887766544
No 305
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=26.90 E-value=4.5e+02 Score=25.57 Aligned_cols=25 Identities=4% Similarity=0.094 Sum_probs=16.2
Q ss_pred ceEEEcCCCCEEEEeCCCCeEEEEcCC
Q 010579 146 KGLAVDDRGNIYIADTMNMAIRKISDT 172 (507)
Q Consensus 146 ~GIaVd~dGnIYVADs~N~rIrk~d~~ 172 (507)
..+++ +|+.+++=+.++.|+.+|..
T Consensus 260 ~~~~~--~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 260 NVVDF--DDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EEEEe--CCCEEEEEeCCCeEEEEECC
Confidence 35555 56666655567788888843
No 306
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=26.79 E-value=2.6e+02 Score=22.75 Aligned_cols=23 Identities=13% Similarity=0.216 Sum_probs=17.8
Q ss_pred cceEEEcCCCCEEEEeCCCCeEE
Q 010579 145 PKGLAVDDRGNIYIADTMNMAIR 167 (507)
Q Consensus 145 P~GIaVd~dGnIYVADs~N~rIr 167 (507)
+.-+.+..||+|.+.|..+..|.
T Consensus 52 ~~~L~l~~dGnLvL~d~~~~~vW 74 (105)
T 4h3o_A 52 GCSAVLQSDGNFVVYDSSGRSLW 74 (105)
T ss_dssp SCEEEECTTSCEEEECTTCCEEE
T ss_pred cEEEEEeCCccEEEECCCcEEEE
Confidence 44688999999999987765554
No 307
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=25.47 E-value=4.3e+02 Score=28.58 Aligned_cols=80 Identities=18% Similarity=0.219 Sum_probs=46.8
Q ss_pred cCCCcceEEEcCCC-CEEEEeCCCCeEEEEcCCC-cEEEecCcccCCCCCCC---------CCc--------c-CccCCC
Q 010579 141 RMNHPKGLAVDDRG-NIYIADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVD---------GPS--------E-DAKFSN 200 (507)
Q Consensus 141 ~fn~P~GIaVd~dG-nIYVADs~N~rIrk~d~~G-VstIaGG~~g~~~G~~d---------g~~--------~-~a~f~~ 200 (507)
..-+-+.|..|+.+ +|.|+-... .|.+|+.+| |.=+.|+..+-...+.+ |.. . +..|..
T Consensus 353 Dw~HiNsv~~d~~dd~~liSsR~~-~I~~Id~tG~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F~~ 431 (571)
T 3elq_A 353 NWAHVNSIAYDAKDDSIILSSRHQ-GVVKIGRDKQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDFDF 431 (571)
T ss_dssp CSCCEEEEEEETTTTEEEEEETTT-EEEEEETTSCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSCCC
T ss_pred CCcEecceeEcCCCCEEEEECCcc-EEEEEcCCCcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCCcc
Confidence 34567899999844 577766666 999999877 55555654321111110 100 0 123433
Q ss_pred ---CceEEEEcCCCeEEEEeCCCCe
Q 010579 201 ---DFDVVYVGSSCSLLVIDRGNQA 222 (507)
Q Consensus 201 ---P~gIa~vd~~G~LyVaD~gn~r 222 (507)
-++..++ +++.|.|.|.++.+
T Consensus 432 ~~gQH~a~~~-~~g~i~vFDNg~~~ 455 (571)
T 3elq_A 432 TYTQHTAWIS-SKGTLTIFDNGDGR 455 (571)
T ss_dssp CSSCEEEEEC-TTSCEEEEECCTTG
T ss_pred ccCCcCeEEc-CCCeEEEEeCCCCC
Confidence 3455544 67999999987654
No 308
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=21.23 E-value=1.5e+02 Score=32.56 Aligned_cols=83 Identities=10% Similarity=0.132 Sum_probs=53.6
Q ss_pred CCcceEEEcCCCC-EEEEeCCCCeEEEEcCCCc-EEEecCcccCCCCCCCCCccCccC-CCCceEEEEcCCCeEEEEeCC
Q 010579 143 NHPKGLAVDDRGN-IYIADTMNMAIRKISDTGV-TTIAGGKWSRGVGHVDGPSEDAKF-SNDFDVVYVGSSCSLLVIDRG 219 (507)
Q Consensus 143 n~P~GIaVd~dGn-IYVADs~N~rIrk~d~~GV-stIaGG~~g~~~G~~dg~~~~a~f-~~P~gIa~vd~~G~LyVaD~g 219 (507)
+.|.|+-++|||. ++|+.....+|-+|+-.-+ ..++++. ....+-...+..+ -.|...++ |.+|+.|.+=.-
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~----~~~~~~~~ae~e~GlGPlHt~F-d~~G~aYTtlfi 397 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL----ADPRDVIVGEPELGLGPLHTTF-DGRGNAYTTLFI 397 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC----SCGGGGEEECCBCCSCEEEEEE-CSSSEEEEEETT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc----cCcccceEeeccCCCcccEEEE-CCCCceEeeeee
Confidence 7899999999998 8888888888888884431 1111110 0000000001111 26888886 778999999888
Q ss_pred CCeEEEEECCC
Q 010579 220 NQAIREIQLHD 230 (507)
Q Consensus 220 n~rIr~I~l~~ 230 (507)
...|.+.+++.
T Consensus 398 dSqvvkWni~~ 408 (638)
T 3sbq_A 398 DSQVVKWNMEE 408 (638)
T ss_dssp TTEEEEEEHHH
T ss_pred cceEEEEeccH
Confidence 88898887653
No 309
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=21.15 E-value=7.3e+02 Score=26.00 Aligned_cols=15 Identities=13% Similarity=0.042 Sum_probs=10.3
Q ss_pred ceEEEcCC-CCEEEEe
Q 010579 146 KGLAVDDR-GNIYIAD 160 (507)
Q Consensus 146 ~GIaVd~d-GnIYVAD 160 (507)
.++++|++ |.|||..
T Consensus 389 ~~~a~dp~~g~~yv~~ 404 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGL 404 (571)
T ss_dssp CBCEEETTTTEEEEEE
T ss_pred CCceECCCCCEEEEEc
Confidence 36888885 5577763
Done!