BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010585
(507 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IYG|B Chain B, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
pdb|3KTT|B Chain B, Atomic Model Of Bovine Tric Cct2(Beta) Subunit Derived
From A 4.0 Angstrom Cryo-Em Map
pdb|4A0O|A Chain A, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|B Chain B, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|C Chain C, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|D Chain D, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|E Chain E, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|F Chain F, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|G Chain G, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|H Chain H, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|I Chain I, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|J Chain J, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|K Chain K, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|L Chain L, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|M Chain M, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|N Chain N, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|O Chain O, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|P Chain P, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0V|A Chain A, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|B Chain B, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|C Chain C, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|D Chain D, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|E Chain E, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|F Chain F, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|G Chain G, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|H Chain H, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|I Chain I, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|J Chain J, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|K Chain K, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|L Chain L, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|M Chain M, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|N Chain N, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|O Chain O, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|P Chain P, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0W|A Chain A, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|B Chain B, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|C Chain C, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|D Chain D, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|E Chain E, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|F Chain F, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|G Chain G, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|H Chain H, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|I Chain I, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|J Chain J, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|K Chain K, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|L Chain L, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|M Chain M, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|N Chain N, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|O Chain O, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|P Chain P, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A13|A Chain A, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|B Chain B, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|C Chain C, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|D Chain D, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|E Chain E, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|F Chain F, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|G Chain G, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|H Chain H, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|I Chain I, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|J Chain J, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|K Chain K, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|L Chain L, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|M Chain M, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|N Chain N, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|O Chain O, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|P Chain P, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
Length = 513
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/501 (69%), Positives = 426/501 (85%)
Query: 1 MASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLV 60
++SF+GA+AI DLVK+TLGPKGMDKIL S+GR + VTNDGATILK++ +DNPAAKVLV
Sbjct: 13 LSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLV 72
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKV 120
D+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP TII+G+R A + AR ALL
Sbjct: 73 DMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSA 132
Query: 121 VDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKP 180
VD+ + F+ DLM IA TTLSSK+L+ K+HF +LAV+AV+RLKGS NLE+I +IKK
Sbjct: 133 VDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKL 192
Query: 181 GGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAA 240
GGSL DS+LDEGF+LDKKIG+ QPKRIENAKIL+ANT MDTDK+KI+G+RVRVDS +K A
Sbjct: 193 GGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVA 252
Query: 241 EIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 300
EIE AEK+KM+EKV++I+ HGINCF+NRQLIYN+PE+LF AG++AIEHADF G+ERLAL
Sbjct: 253 EIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLAL 312
Query: 301 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDE 360
VTGGEIASTFD+PE VKLG CKLIEE+MIGEDKLIHFSGV +G+ACTIVLRGA+ +LDE
Sbjct: 313 VTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDE 372
Query: 361 AERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVA 420
AERSLHDALCVL+QTV DSR ++GGG EM+MA V +LA +TPGK++ A+E++++AL
Sbjct: 373 AERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRM 432
Query: 421 IPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLL 480
+PT IADNAG DSA+L+AQLRA H + AG+D+ G++GDM+ LGI+ESF+VK+ VLL
Sbjct: 433 LPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLL 492
Query: 481 SATEAAEMILRVDEIITCAPR 501
SA EAAE+ILRVD II APR
Sbjct: 493 SAAEAAEVILRVDNIIKAAPR 513
>pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|J Chain J, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|BB Chain b, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|JJ Chain j, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|B Chain B, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|J Chain J, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|BB Chain b, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|JJ Chain j, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 527
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/502 (62%), Positives = 395/502 (78%), Gaps = 2/502 (0%)
Query: 1 MASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLV 60
+++FVGA+A+ DLVK+TLGPKGMDK+LQS VTNDGATILKS+ +DNPAAKVLV
Sbjct: 20 LSAFVGAIAVGDLVKSTLGPKGMDKLLQSAS-SNTCMVTNDGATILKSIPLDNPAAKVLV 78
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLV-AAKIHPMTIISGFRMAAECARDALLQK 119
+ISKVQDDEVGDGTTSV VL+ ELLREAEKL+ +KIHP TII G+R+A+ A DAL +
Sbjct: 79 NISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKA 138
Query: 120 VVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKK 179
VDN + F+ DL+ IA TTLSSKILSQDK+HF +LA +A++RLKGSTNLE IQIIK
Sbjct: 139 AVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKI 198
Query: 180 PGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKA 239
GG L DSFLDEGFIL KK G QPKRIENAKIL+ANT +DTDKVKI+G + +VDS +K
Sbjct: 199 LGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKL 258
Query: 240 AEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLA 299
A++E AE++KM+ K+ KI GIN F+NRQLIY++PE+LF D GI +IEHADF+G+ERLA
Sbjct: 259 AQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLA 318
Query: 300 LVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLD 359
LVTGGE+ STFD P KLG C +IEEIM+GE + FSG + G+ACTIVLRGA+ LD
Sbjct: 319 LVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLD 378
Query: 360 EAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALV 419
EAERSLHDAL VLSQT ++R + GGG EMVM+K VD A+ GKKS A+EAF+RAL
Sbjct: 379 EAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALR 438
Query: 420 AIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVL 479
+PT +ADNAG DS+EL+++LR+ +G+D+ +G++ DM +LGI ES+K+K+AV+
Sbjct: 439 QLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVV 498
Query: 480 LSATEAAEMILRVDEIITCAPR 501
SA+EAAE++LRVD II PR
Sbjct: 499 SSASEAAEVLLRVDNIIRARPR 520
>pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|B Chain B, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|C Chain C, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|D Chain D, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|E Chain E, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|F Chain F, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|G Chain G, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|H Chain H, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|I Chain I, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
Length = 553
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 312/510 (61%), Gaps = 18/510 (3%)
Query: 2 ASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLV 60
A+ A+ + +K+T GP+GMDK+L S G ++T+TNDGATIL + + +PAAK+LV
Sbjct: 34 ANIAAVKAVEEALKSTYGPRGMDKMLVDSLG---DITITNDGATILDKMDLQHPAAKLLV 90
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKV 120
I+K QD+E DGT + V+ +GEL+++AE L+ +HP IISG++ A E A LQ +
Sbjct: 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVA----LQTI 146
Query: 121 VDNKENAETFKSDLM-KIAMTTLSSKILSQDKEHFGQLAVDAVMRL------KGSTNLES 173
+ + +DL+ KIAMT+LSSK ++ +E+ + V AV ++ K +L++
Sbjct: 147 QELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDN 206
Query: 174 IQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVR 232
IQI+KK GGS+ D+ L G ++DK++ G PKR+ENAKI + + +++ +K ++ A +R
Sbjct: 207 IQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEVEKPEL-DAEIR 265
Query: 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADF 292
++ ++ + E+ ++EKV KI+A G N + ++ I + A G+LA+ A
Sbjct: 266 INDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKK 325
Query: 293 DGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRG 352
+E+LA TGG + S D LG+ LIEE +GEDK++ G + ++ +I++RG
Sbjct: 326 SDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRG 385
Query: 353 ASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIE 412
++DE ER+L DAL ++ + D R + GGG E+ +AK++ + A + GK+ A+E
Sbjct: 386 GLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVE 445
Query: 413 AFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCP-AGIDVISGSVGDMAELGISES 471
A++ AL ++ + + +NAG D +L+ +LR+ H+ E GID+ +G DM + G+ E
Sbjct: 446 AYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEP 505
Query: 472 FKVKQAVLLSATEAAEMILRVDEIITCAPR 501
VK + +ATEAA ++LR+D++++ +
Sbjct: 506 ALVKMNAIKAATEAATLVLRIDDVVSAGKK 535
>pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
Length = 548
Score = 320 bits (820), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 310/511 (60%), Gaps = 17/511 (3%)
Query: 3 SFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
+ + A IA+ V+TTLGPKGMDK+L S G ++ VTNDGATIL + + +PAAK++V+
Sbjct: 28 NILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVVTNDGATILDKIDLQHPAAKMMVE 84
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV 121
++K QD E GDGTT+ VV+AGELLR+AE+L+ IHP I G+ +AAE A++ L + +
Sbjct: 85 VAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAI 144
Query: 122 D-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL------KGSTNLESI 174
+ ++ ET L+KIA T+++ K KE +LAV+AV ++ K +L++I
Sbjct: 145 RVDPDDEET----LLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 175 QIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRV 233
+ KK G +++S L G ++DK++ + PKR+ENAKI + N A++ K + A++ +
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE-TDAKINI 259
Query: 234 DSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFD 293
S + E++ +++ V I G N ++ I + + A GI+A+
Sbjct: 260 TSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKS 319
Query: 294 GIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGA 353
+E+LA TG +I + + LG+ +++EE + + +I G + +A TI++RG
Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGG 379
Query: 354 SHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEA 413
+ HV+DE ER+L DA+ V+ + D VL GG PE+ +A +DE A++ GK++ AIE
Sbjct: 380 TEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIEN 439
Query: 414 FSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFK 473
F+ AL IP T+A+NAGLD+ E++ ++ +EH+ G GIDV G DM E GI E +
Sbjct: 440 FADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLR 499
Query: 474 VKQAVLLSATEAAEMILRVDEIITCAPRRRE 504
VK+ + SA+EAA MILR+D++I + E
Sbjct: 500 VKKQAIKSASEAAIMILRIDDVIAAKATKPE 530
>pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|E Chain E, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|F Chain F, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|G Chain G, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|H Chain H, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
Length = 548
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 310/511 (60%), Gaps = 17/511 (3%)
Query: 3 SFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
+ + A IA+ V+TTLGPKGMDK+L S G ++ VTND ATIL + + +PAAK++V+
Sbjct: 28 NILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVVTNDCATILDKIDLQHPAAKMMVE 84
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV 121
++K QD E GDGTT+ VV+AGELLR+AE+L+ IHP II G+ +AAE A++ L + +
Sbjct: 85 VAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAI 144
Query: 122 D-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL------KGSTNLESI 174
+ ++ ET L+KIA T+++ K KE +LAV+AV ++ K +L++I
Sbjct: 145 RVDPDDEET----LLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 175 QIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRV 233
+ KK G +++S L G ++DK++ + PKR+ENAKI + N A++ K + A++ +
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE-TDAKINI 259
Query: 234 DSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFD 293
S + E++ +++ V I G N ++ I + + A GI+A+
Sbjct: 260 TSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKS 319
Query: 294 GIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGA 353
+E+LA TG +I + + LG+ +++EE + + +I G + +A TI++RG
Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGG 379
Query: 354 SHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEA 413
+ HV+DE ER+L DA+ V+ + D VL GG PE+ +A +DE A++ GK++ AIE
Sbjct: 380 TEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIEN 439
Query: 414 FSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFK 473
F+ AL IP T+A+NAGLD+ E++ ++ +EH+ G GIDV G DM E GI E +
Sbjct: 440 FADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLR 499
Query: 474 VKQAVLLSATEAAEMILRVDEIITCAPRRRE 504
VK+ + SA+EAA MILR+D++I + E
Sbjct: 500 VKKQAIKSASEAAIMILRIDDVIAAKATKPE 530
>pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q3Q|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
Length = 548
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 309/511 (60%), Gaps = 17/511 (3%)
Query: 3 SFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
+ + A IA+ V+TTLGPKGMDK+L S G ++ VTND ATIL + + +PAAK++V+
Sbjct: 28 NILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVVTNDCATILDKIDLQHPAAKMMVE 84
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV 121
++K QD E GDGTT+ VV+AGELLR+AE+L+ IHP I G+ +AAE A++ L + +
Sbjct: 85 VAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAI 144
Query: 122 D-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL------KGSTNLESI 174
+ ++ ET L+KIA T+++ K KE +LAV+AV ++ K +L++I
Sbjct: 145 RVDPDDEET----LLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 175 QIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRV 233
+ KK G +++S L G ++DK++ + PKR+ENAKI + N A++ K + A++ +
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE-TDAKINI 259
Query: 234 DSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFD 293
S + E++ +++ V I G N ++ I + + A GI+A+
Sbjct: 260 TSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKS 319
Query: 294 GIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGA 353
+E+LA TG +I + + LG+ +++EE + + +I G + +A TI++RG
Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGG 379
Query: 354 SHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEA 413
+ HV+DE ER+L DA+ V+ + D VL GG PE+ +A +DE A++ GK++ AIE
Sbjct: 380 TEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIEN 439
Query: 414 FSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFK 473
F+ AL IP T+A+NAGLD+ E++ ++ +EH+ G GIDV G DM E GI E +
Sbjct: 440 FADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLR 499
Query: 474 VKQAVLLSATEAAEMILRVDEIITCAPRRRE 504
VK+ + SA+EAA MILR+D++I + E
Sbjct: 500 VKKQAIKSASEAAIMILRIDDVIAAKATKPE 530
>pdb|1A6D|A Chain A, Thermosome From T. Acidophilum
pdb|1A6E|A Chain A, Thermosome-Mg-Adp-Alf3 Complex
Length = 545
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/498 (37%), Positives = 297/498 (59%), Gaps = 17/498 (3%)
Query: 7 AMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 65
A AIAD V+TTLGPKGMDK+L S G ++ ++NDGATILK + +++P AK++V++SK
Sbjct: 31 AKAIADAVRTTLGPKGMDKMLVDSIG---DIIISNDGATILKEMDVEHPTAKMIVEVSKA 87
Query: 66 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKE 125
QD VGDGTT+ VVL+GELL++AE L+ +HP I +G+R+A AR K++D
Sbjct: 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEAR-----KIIDEIA 142
Query: 126 NAETFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLK-GSTNLES--IQIIKK 179
T + L KIA+T LS K + L AV+AV ++ G T +++ I++ KK
Sbjct: 143 EKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKK 202
Query: 180 PGGSLKDSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSK 238
GGS+ D+ G ++DK K+ P ++NAKI + ++A++ K +I A+V++ SK
Sbjct: 203 NGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIE-AKVQISDPSK 261
Query: 239 AAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 298
+ E ++ V+KI G N + ++ I + + A GI A+ +E+L
Sbjct: 262 IQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKL 321
Query: 299 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVL 358
A TG +I + D+ LG + +EE IG+D++ G + +A +I++RG + HV+
Sbjct: 322 AKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVV 381
Query: 359 DEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418
E ER+L+DA+ V++ T D + L+GGG E +A + + A G++ AIEAF++AL
Sbjct: 382 SEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKAL 441
Query: 419 VAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAV 478
IP T+A+NAG+D + +L+A+ +K G+D+ + VGDM G+ + +VK
Sbjct: 442 EIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHA 501
Query: 479 LLSATEAAEMILRVDEII 496
L SA E A MILR+D++I
Sbjct: 502 LESAVEVATMILRIDDVI 519
>pdb|3IYG|H Chain H, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 283/497 (56%), Gaps = 9/497 (1%)
Query: 10 IADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 69
IA+ V+TTLGP+GMDK++ GRG+ T++NDGATILK L + +PAAK LVDI+K QD E
Sbjct: 23 IAEAVRTTLGPRGMDKLIVD-GRGK-ATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80
Query: 70 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAET 129
VGDGTTSV +LA E L++ + V +HP II FR A + A + + + V K+ +
Sbjct: 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKV 140
Query: 130 FKSDLM-KIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSF 188
+ L+ K AMT LSSK++SQ K F ++ VDAVM L L+ I I K GG+L++S
Sbjct: 141 EQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQ 200
Query: 189 LDEGFILDKKIGIG----QPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
L G K QPK+ N I + N ++ K + A +RV ++ I
Sbjct: 201 LVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELEL-KAEKDNAEIRVHTVEDYQAIVD 259
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
AE + +K++KI G +++ I + + FAD + + ++R + GG
Sbjct: 260 AEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGG 319
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
I ++ + S LG C++ EE IG ++ F+G + CTI+LRG + ++E ERS
Sbjct: 320 SIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERS 379
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
LHDA+ ++ + + + V+ GGG EM ++K + + +R PGK+ I A+++AL IP
Sbjct: 380 LHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQ 439
Query: 425 IADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATE 484
+ DNAG D+ ++ +LRA H + G G+D+ + + D E + E V+ L +A+E
Sbjct: 440 LCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASE 499
Query: 485 AAEMILRVDEIITCAPR 501
AA +I+ VDE I PR
Sbjct: 500 AACLIVSVDETIK-NPR 515
>pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|B Chain B, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|C Chain C, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|D Chain D, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|E Chain E, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|F Chain F, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|G Chain G, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|H Chain H, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|I Chain I, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|J Chain J, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|K Chain K, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|L Chain L, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|M Chain M, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|N Chain N, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|O Chain O, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|P Chain P, Atomic Model Of Mm-Cpn In The Closed State
pdb|3KFB|A Chain A, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|B Chain B, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|C Chain C, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|D Chain D, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|E Chain E, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|F Chain F, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|G Chain G, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|H Chain H, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3RUQ|A Chain A, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|B Chain B, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|C Chain C, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|D Chain D, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
Length = 543
Score = 298 bits (762), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 181/500 (36%), Positives = 304/500 (60%), Gaps = 15/500 (3%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 31 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 87
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 88 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 145
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 146 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 204
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A++ + + A +R+ +K E
Sbjct: 205 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE-TDAEIRITDPAKLMEFIE 263
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
E++ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 264 QEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 323
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 324 NVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 383
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ DA+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 384 VDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 443
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 444 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 502
Query: 483 TEAAEMILRVDEIITCAPRR 502
E+ EM+LR+D++I R
Sbjct: 503 AESTEMLLRIDDVIAAEKLR 522
>pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp
pdb|3IZH|B Chain B, Mm-Cpn D386a With Atp
pdb|3IZH|C Chain C, Mm-Cpn D386a With Atp
pdb|3IZH|D Chain D, Mm-Cpn D386a With Atp
pdb|3IZH|E Chain E, Mm-Cpn D386a With Atp
pdb|3IZH|F Chain F, Mm-Cpn D386a With Atp
pdb|3IZH|G Chain G, Mm-Cpn D386a With Atp
pdb|3IZH|H Chain H, Mm-Cpn D386a With Atp
pdb|3IZH|I Chain I, Mm-Cpn D386a With Atp
pdb|3IZH|J Chain J, Mm-Cpn D386a With Atp
pdb|3IZH|K Chain K, Mm-Cpn D386a With Atp
pdb|3IZH|L Chain L, Mm-Cpn D386a With Atp
pdb|3IZH|M Chain M, Mm-Cpn D386a With Atp
pdb|3IZH|N Chain N, Mm-Cpn D386a With Atp
pdb|3IZH|O Chain O, Mm-Cpn D386a With Atp
pdb|3IZH|P Chain P, Mm-Cpn D386a With Atp
pdb|3IZM|A Chain A, Mm-Cpn Wildtype With Atp
pdb|3IZM|B Chain B, Mm-Cpn Wildtype With Atp
pdb|3IZM|C Chain C, Mm-Cpn Wildtype With Atp
pdb|3IZM|D Chain D, Mm-Cpn Wildtype With Atp
pdb|3IZM|E Chain E, Mm-Cpn Wildtype With Atp
pdb|3IZM|F Chain F, Mm-Cpn Wildtype With Atp
pdb|3IZM|G Chain G, Mm-Cpn Wildtype With Atp
pdb|3IZM|H Chain H, Mm-Cpn Wildtype With Atp
pdb|3IZM|I Chain I, Mm-Cpn Wildtype With Atp
pdb|3IZM|J Chain J, Mm-Cpn Wildtype With Atp
pdb|3IZM|K Chain K, Mm-Cpn Wildtype With Atp
pdb|3IZM|L Chain L, Mm-Cpn Wildtype With Atp
pdb|3IZM|M Chain M, Mm-Cpn Wildtype With Atp
pdb|3IZM|N Chain N, Mm-Cpn Wildtype With Atp
pdb|3IZM|O Chain O, Mm-Cpn Wildtype With Atp
pdb|3IZM|P Chain P, Mm-Cpn Wildtype With Atp
Length = 513
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/494 (36%), Positives = 303/494 (61%), Gaps = 15/494 (3%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 25 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 81
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 82 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 139
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 140 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 198
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A++ + + A +R+ +K E
Sbjct: 199 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE-TDAEIRITDPAKLMEFIE 257
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
E++ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 258 QEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 317
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 318 NVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 377
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ DA+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 378 VDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 437
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 438 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 496
Query: 483 TEAAEMILRVDEII 496
E+ EM+LR+D++I
Sbjct: 497 AESTEMLLRIDDVI 510
>pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUV|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUW|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
Length = 543
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/500 (36%), Positives = 303/500 (60%), Gaps = 15/500 (3%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 31 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 87
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 88 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 145
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 146 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 204
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A++ + + A +R+ +K E
Sbjct: 205 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE-TDAEIRITDPAKLMEFIE 263
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
E++ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 264 QEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 323
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 324 NVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 383
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ DA+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 384 VDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 443
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 444 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 502
Query: 483 TEAAEMILRVDEIITCAPRR 502
E+ EM+LR+D++I R
Sbjct: 503 AESTEMLLRIDDVIAAEKLR 522
>pdb|1A6D|B Chain B, Thermosome From T. Acidophilum
pdb|1A6E|B Chain B, Thermosome-Mg-Adp-Alf3 Complex
Length = 543
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 304/500 (60%), Gaps = 15/500 (3%)
Query: 7 AMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 65
A+AI++ V+++LGP+GMDK+L S G ++ +TNDG TILK + +++PAAK++V++SK
Sbjct: 30 AIAISNSVRSSLGPRGMDKMLVDSLG---DIVITNDGVTILKEMDVEHPAAKMMVEVSKT 86
Query: 66 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKE 125
QD VGDGTT+ V++AG LL++A+ L+ +HP I G+RMA+E A+ + + + K
Sbjct: 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDE--ISTKI 144
Query: 126 NAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL------KGSTNLESIQIIKK 179
A+ K+ L+K+A T+L+SK S K+ +++ +AV + K + ++IQ++KK
Sbjct: 145 GADE-KALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKK 203
Query: 180 PGGSLKDSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSK 238
GG++ D+ L G I+DK K+ G P +++AKI + + ++ K + + +R++ S
Sbjct: 204 QGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPE-FDTNLRIEDPSM 262
Query: 239 AAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 298
+ E+ +RE V KI + G N + ++ I + + + AGI A+ +++L
Sbjct: 263 IQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKL 322
Query: 299 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVL 358
A TG I ST D S LG + +E++ +GED + +G + +A +I++RG + HV+
Sbjct: 323 AKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVV 382
Query: 359 DEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418
DE ERS+ D+L V++ + D GGG +A + A+K G++ AIE F+ A+
Sbjct: 383 DEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAI 442
Query: 419 VAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAV 478
IP +A+NAGLD +++ +LRAEH K GI+V +G + DM + G+ E +V +
Sbjct: 443 EEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQA 502
Query: 479 LLSATEAAEMILRVDEIITC 498
+ SATEAA MILR+D++I
Sbjct: 503 IESATEAAIMILRIDDVIAT 522
>pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp
pdb|3IZI|B Chain B, Mm-Cpn Rls With Atp
pdb|3IZI|C Chain C, Mm-Cpn Rls With Atp
pdb|3IZI|D Chain D, Mm-Cpn Rls With Atp
pdb|3IZI|E Chain E, Mm-Cpn Rls With Atp
pdb|3IZI|F Chain F, Mm-Cpn Rls With Atp
pdb|3IZI|G Chain G, Mm-Cpn Rls With Atp
pdb|3IZI|H Chain H, Mm-Cpn Rls With Atp
pdb|3IZI|I Chain I, Mm-Cpn Rls With Atp
pdb|3IZI|J Chain J, Mm-Cpn Rls With Atp
pdb|3IZI|K Chain K, Mm-Cpn Rls With Atp
pdb|3IZI|L Chain L, Mm-Cpn Rls With Atp
pdb|3IZI|M Chain M, Mm-Cpn Rls With Atp
pdb|3IZI|N Chain N, Mm-Cpn Rls With Atp
pdb|3IZI|O Chain O, Mm-Cpn Rls With Atp
pdb|3IZI|P Chain P, Mm-Cpn Rls With Atp
pdb|3IZJ|A Chain A, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|B Chain B, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|C Chain C, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|D Chain D, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|E Chain E, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|F Chain F, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|G Chain G, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|H Chain H, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|I Chain I, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|J Chain J, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|K Chain K, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|L Chain L, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|M Chain M, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|N Chain N, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|O Chain O, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|P Chain P, Mm-Cpn Rls With Atp And Alfx
Length = 513
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/494 (36%), Positives = 302/494 (61%), Gaps = 15/494 (3%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 25 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 81
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 82 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 139
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 140 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 198
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A++ + + A +R+ +K E
Sbjct: 199 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE-TDAEIRITDPAKLMEFIE 257
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
E++ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 258 QEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 317
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 318 NVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 377
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ DA+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 378 VDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 437
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 438 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 496
Query: 483 TEAAEMILRVDEII 496
E+ EM+LR+D++I
Sbjct: 497 AESTEMLLRIDDVI 510
>pdb|3IYG|A Chain A, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 529
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 302/521 (57%), Gaps = 29/521 (5%)
Query: 3 SFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
+ + A +IA++VK++LGP G+DK+L G +VT+TNDGATILK L +++PAAKVL +
Sbjct: 15 NVMAAASIANIVKSSLGPVGLDKMLVDDIG---DVTITNDGATILKLLEVEHPAAKVLCE 71
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV 121
++ +QD EVGDGTTSVV++A ELL+ A++LV KIHP ++ISG+R+A + A + + ++
Sbjct: 72 LADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLI 131
Query: 122 DNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS-------TNLESI 174
N + E + L+ A T++SSK++ + + F L VDAV+ +K + + SI
Sbjct: 132 INTD--ELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSI 189
Query: 175 QIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRV 233
++K G S +S L G+ L+ +G G PKRI NAKI + ++ K+K+ G +V +
Sbjct: 190 NVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKL-GVQVVI 248
Query: 234 DSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFD 293
K +I E +E++QKI+A G N + I + + F +AG +A+
Sbjct: 249 TDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKR 308
Query: 294 GIERLALVTGGEIASTFDNP------ESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACT 347
++R+A +G + ST N E+ LG + + + I +D+LI + + +
Sbjct: 309 DLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSAS 368
Query: 348 IVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKK 407
++LRGA+ + DE ERSLHDALCV+ + + V+ GGG E ++ ++ A ++
Sbjct: 369 VILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSRE 428
Query: 408 SHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEH--------QKEGCPAGIDVISGS 459
AI F+R+L+ IP T+A NA DS +L+A+LRA H +K G+D+++G
Sbjct: 429 QLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGK 488
Query: 460 VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 500
D + G+ E VK L ATEAA ILR+D++I P
Sbjct: 489 PRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529
>pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|B Chain B, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|C Chain C, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|D Chain D, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|E Chain E, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|F Chain F, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|G Chain G, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|H Chain H, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|I Chain I, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|J Chain J, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|K Chain K, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|L Chain L, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|M Chain M, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|N Chain N, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|O Chain O, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|P Chain P, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3KFE|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|E Chain E, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|F Chain F, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|G Chain G, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|H Chain H, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
Length = 521
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/500 (35%), Positives = 293/500 (58%), Gaps = 37/500 (7%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 31 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 87
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 88 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 145
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 146 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 204
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A IE
Sbjct: 205 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCA-----------------------IEE 241
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
+ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 242 TASEMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 301
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 302 NVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 361
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ DA+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 362 VDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 421
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 422 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 480
Query: 483 TEAAEMILRVDEIITCAPRR 502
E+ EM+LR+D++I R
Sbjct: 481 AESTEMLLRIDDVIAAEKLR 500
>pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp
pdb|3IZN|B Chain B, Mm-Cpn Deltalid With Atp
pdb|3IZN|C Chain C, Mm-Cpn Deltalid With Atp
pdb|3IZN|D Chain D, Mm-Cpn Deltalid With Atp
pdb|3IZN|E Chain E, Mm-Cpn Deltalid With Atp
pdb|3IZN|F Chain F, Mm-Cpn Deltalid With Atp
pdb|3IZN|G Chain G, Mm-Cpn Deltalid With Atp
pdb|3IZN|H Chain H, Mm-Cpn Deltalid With Atp
pdb|3IZN|I Chain I, Mm-Cpn Deltalid With Atp
pdb|3IZN|J Chain J, Mm-Cpn Deltalid With Atp
pdb|3IZN|K Chain K, Mm-Cpn Deltalid With Atp
pdb|3IZN|L Chain L, Mm-Cpn Deltalid With Atp
pdb|3IZN|M Chain M, Mm-Cpn Deltalid With Atp
pdb|3IZN|N Chain N, Mm-Cpn Deltalid With Atp
pdb|3IZN|O Chain O, Mm-Cpn Deltalid With Atp
pdb|3IZN|P Chain P, Mm-Cpn Deltalid With Atp
pdb|3J03|A Chain A, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|B Chain B, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|C Chain C, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|D Chain D, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|E Chain E, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|F Chain F, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|G Chain G, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|H Chain H, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|I Chain I, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|J Chain J, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|K Chain K, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|L Chain L, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|M Chain M, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|N Chain N, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|O Chain O, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|P Chain P, Lidless Mm-Cpn In The Closed State With AtpALFX
Length = 491
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 292/494 (59%), Gaps = 37/494 (7%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 25 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 81
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 82 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 139
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 140 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 198
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A IE
Sbjct: 199 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCA-----------------------IEE 235
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
+ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 236 TASEMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 295
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 296 NVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 355
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ DA+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 356 VDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 415
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 416 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 474
Query: 483 TEAAEMILRVDEII 496
E+ EM+LR+D++I
Sbjct: 475 AESTEMLLRIDDVI 488
>pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|B Chain B, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|C Chain C, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|D Chain D, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|E Chain E, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|F Chain F, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|G Chain G, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|H Chain H, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|I Chain I, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|J Chain J, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|K Chain K, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|L Chain L, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|M Chain M, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|N Chain N, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|O Chain O, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|P Chain P, Mm-Cpn Rls Deltalid With Atp
pdb|3IZL|A Chain A, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|B Chain B, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|C Chain C, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|D Chain D, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|E Chain E, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|F Chain F, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|G Chain G, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|H Chain H, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|I Chain I, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|J Chain J, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|K Chain K, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|L Chain L, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|M Chain M, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|N Chain N, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|O Chain O, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|P Chain P, Mm-Cpn Rls Deltalid With Atp And Alfx
Length = 491
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 291/494 (58%), Gaps = 37/494 (7%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 25 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 81
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 82 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 139
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 140 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 198
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A IE
Sbjct: 199 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCA-----------------------IEE 235
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
+ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 236 TASEMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 295
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 296 NVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 355
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ DA+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 356 VDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 415
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 416 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 474
Query: 483 TEAAEMILRVDEII 496
E+ EM+LR+D++I
Sbjct: 475 AESTEMLLRIDDVI 488
>pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|B Chain B, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|C Chain C, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|D Chain D, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|E Chain E, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|F Chain F, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|G Chain G, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|H Chain H, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|I Chain I, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|J Chain J, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|K Chain K, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|L Chain L, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|M Chain M, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|N Chain N, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|O Chain O, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|P Chain P, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
Length = 491
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 291/494 (58%), Gaps = 37/494 (7%)
Query: 10 IADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 68
IA+ V++TLGPKGMDK+L G +V VTNDG TIL+ + +++PAAK+L++++K Q+
Sbjct: 25 IAETVRSTLGPKGMDKMLVDDLG---DVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEK 81
Query: 69 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE 128
EVGDGTT+ VV+AGELLR+AE+L+ +HP ++ G++ AA+ A++ L K + + A+
Sbjct: 82 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELL--KTIACEVGAQ 139
Query: 129 TFKSDLMKIAMTTLSSKILSQDKEHFGQL---AVDAVMRLKGSTNLESIQIIKKPGGSLK 185
K L KIAMT+++ K + KE ++ AV AV+ +G + + I+I KK G S+
Sbjct: 140 D-KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID 198
Query: 186 DSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEG 244
D+ L +G ++DK ++ PK++ +AKI + N A IE
Sbjct: 199 DTELIKGVLVDKERVSAQMPKKVTDAKIALLNCA-----------------------IEE 235
Query: 245 AEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304
+ +++ V +I A G N ++ I + + A GI+A +E+LA TG
Sbjct: 236 TASEMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 295
Query: 305 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERS 364
+ + + + LG L+EE I D +I + +A T+++RG + HV++E R+
Sbjct: 296 NVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 355
Query: 365 LHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTT 424
+ A+ V+ T+ D R++ GGG E+ ++ ++ E A G++ A+ AF+ AL IP T
Sbjct: 356 VDAAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRT 415
Query: 425 IADNAGLDSAELIAQLRAEHQKEG--CPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+A+NAGLD+ E++ ++RA H G C AG++V +G+V DM E G+ E +VK + SA
Sbjct: 416 LAENAGLDAIEILVKVRAAHASNGNKC-AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSA 474
Query: 483 TEAAEMILRVDEII 496
E+ EM+LR+D++I
Sbjct: 475 AESTEMLLRIDDVI 488
>pdb|3P9D|G Chain G, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|O Chain O, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|GG Chain g, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|OO Chain o, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|G Chain G, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|O Chain O, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|GG Chain g, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|OO Chain o, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 550
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 274/495 (55%), Gaps = 8/495 (1%)
Query: 8 MAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 67
+A+ + +K TLGP G D ++ ++ + + T++NDGATILK L + +PAAK LVDIS+ QD
Sbjct: 34 VAVQEALKPTLGPLGSDILIVTSNQ--KTTISNDGATILKLLDVVHPAAKTLVDISRAQD 91
Query: 68 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENA 127
EVGDGTTSV +LAGEL++EA+ + I I+ G+R A A + + + VD
Sbjct: 92 AEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEK 151
Query: 128 ETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL-KGSTNLESIQIIKKPGGSLKD 186
+ + L + A T +SSK++ + + F ++ VDAV+ L + + + I I K PGG++++
Sbjct: 152 SSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEE 211
Query: 187 SFLDEGFILDKKIGIG----QPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEI 242
S G K QPK+ N KIL N ++ K + A VRV+ + I
Sbjct: 212 SLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELEL-KAEKDNAEVRVEHVEDYQAI 270
Query: 243 EGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 302
AE Q + EK++++ G N +++ I + + FAD I D + R+
Sbjct: 271 VDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAV 330
Query: 303 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAE 362
GG I ST + + LG C L EE+ IG ++ F G + CT++LRG + V+ E E
Sbjct: 331 GGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVE 390
Query: 363 RSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIP 422
RSLHDA+ ++ + + + ++ GGG EM ++K + + ++ GK+ I AF++AL IP
Sbjct: 391 RSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIP 450
Query: 423 TTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSA 482
+ +NAG D+ E++ +LR H K G+ + ++GD + E VK L SA
Sbjct: 451 RQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSA 510
Query: 483 TEAAEMILRVDEIIT 497
TEA +IL VDE IT
Sbjct: 511 TEATNLILSVDETIT 525
>pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 288/505 (57%), Gaps = 18/505 (3%)
Query: 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
+ + A A+A+ +KT+LGP G+DK++ + +VTVTNDGATIL + +D+ AK++V+
Sbjct: 14 SHIMAAKAVANTMKTSLGPNGLDKMM--VDKDGDVTVTNDGATILSMMDVDHQIAKLMVE 71
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECA---RDALLQ 118
+SK QDDE+GDGTT VVVLAG LL EAE+L+ IHP+ I G+ AA A D +
Sbjct: 72 LSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISD 131
Query: 119 KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL----KGSTNLESI 174
V+ + +N E L++ A TTL SK+++ ++AV+AV+ + + + E I
Sbjct: 132 SVLVDMKNTEP----LIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELI 187
Query: 175 QIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRV 233
++ K GG L+D+ L +G I+DK Q PK++E+AKI + + K K ++ V
Sbjct: 188 KVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTK-HKLDV 246
Query: 234 DSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFD 293
S+ ++ EK+K E +++I G N V + + L + A+
Sbjct: 247 TSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGP 306
Query: 294 GIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGVEMGQACTIVLR 351
IE +A+ TGG I F + KLG L++EI G +DK++ + +A TI +R
Sbjct: 307 EIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIR 366
Query: 352 GASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAI 411
G + +++EA+RSLHDALCV+ + D+RV++GGG E+ A V + A K P + +A+
Sbjct: 367 GGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAM 426
Query: 412 EAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPA-GIDVISGSVGDMAELGISE 470
AF+ AL IP +A+N+G++ + + ++RA KE PA GID + DM + E
Sbjct: 427 RAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIE 486
Query: 471 SFKVKQAVLLSATEAAEMILRVDEI 495
+ K+ + AT+ MIL++D+I
Sbjct: 487 TLIGKKQQISLATQMVRMILKIDDI 511
>pdb|3P9D|E Chain E, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|M Chain M, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|EE Chain e, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|MM Chain m, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|E Chain E, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|M Chain M, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|EE Chain e, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|MM Chain m, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 562
Score = 274 bits (701), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 285/510 (55%), Gaps = 18/510 (3%)
Query: 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
+ + A ++A ++KT+LGP+G+DKIL S E+T+TNDGATIL + +DN AK+LV
Sbjct: 49 SHILAARSVASIIKTSLGPRGLDKILISPDG--EITITNDGATILSQMELDNEIAKLLVQ 106
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV 121
+SK QDDE+GDGTT VVVLA LL +A +L+ IHP+ I +GF AA+ A L +
Sbjct: 107 LSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCD 166
Query: 122 D-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL----KGSTNLESIQI 176
D + N E F+ L++ A T+L SKI+S+D + F ++AV+AV+ + + + + I++
Sbjct: 167 DISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKM 226
Query: 177 IKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRI------ENAKILVANTAMDTDKVKIYGA 229
+ GGS+ DS L G ILDK Q PK + + K+ + + K K
Sbjct: 227 QGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTK-H 285
Query: 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEH 289
++ + S+ + +++ E+ K +E + + G + + + + L + A+
Sbjct: 286 KLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRW 345
Query: 290 ADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGVEMGQACT 347
+E +A+ T G I F + KLG C I E G +D+++ + + T
Sbjct: 346 VGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVT 405
Query: 348 IVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKK 407
+RG++ ++DEAER+LHD+LCV+ V DSRV++GGG E+ M+ V E A K G
Sbjct: 406 CFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGID 465
Query: 408 SHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPA-GIDVISGSVGDMAEL 466
+A F++AL IP T+A+N+GLD ++ L+++ KE G+D + DM EL
Sbjct: 466 QYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKEL 525
Query: 467 GISESFKVKQAVLLSATEAAEMILRVDEII 496
+ + F K+ +L AT+ MIL++D +I
Sbjct: 526 FVVDPFIGKKQQILLATQLCRMILKIDNVI 555
>pdb|3P9D|A Chain A, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|I Chain I, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|AA Chain a, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|II Chain i, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|A Chain A, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|I Chain I, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|AA Chain a, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|II Chain i, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 559
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 287/529 (54%), Gaps = 39/529 (7%)
Query: 3 SFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
+ + MA+A++VK++LGP G+DK+L G + TVTNDGATIL L + +PA K+LV+
Sbjct: 29 NVLATMAVANVVKSSLGPVGLDKMLVDDIG---DFTVTNDGATILSLLDVQHPAGKILVE 85
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMA-AECAR--DALLQ 118
+++ QD E+GDGTTSVV++A ELL+ A +LV KIHP TII+GFR+A E R + +L
Sbjct: 86 LAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLS 145
Query: 119 KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGSTN-------L 171
VD K L+ IA T++SSKI+ D + F + VDA++ +K + +
Sbjct: 146 TSVDT-----LGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPV 200
Query: 172 ESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKI-YGA 229
+++ ++K G S +S L G+ L+ + PKRI + +A ++ K ++ G
Sbjct: 201 KAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGV 260
Query: 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEH 289
++ +D + +I E + E+V+KII G + + I + + F +A I+ +
Sbjct: 261 QINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRR 320
Query: 290 ADFDGIERLALVTGGEIASTFDNP------ESVKLGHCKLIEEIMIGEDKLIHFSGVEMG 343
+ + R+A TG + S+ N ES LG C + + +D+ I G
Sbjct: 321 CKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKH 380
Query: 344 QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKT 403
+ +I+LRGA+ + LDE ERSLHD+L V+ +T+ V+ GGG E + +D A
Sbjct: 381 SSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTV 440
Query: 404 PGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEH------------QKEGCPA 451
++ AI F+ AL+ IP T+A NA DS+EL+A+LR+ H ++
Sbjct: 441 GSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNY 500
Query: 452 GIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 500
G+D+I G + D G+ E K L SA EA ILR+D +IT P
Sbjct: 501 GLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDP 549
>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From
Methanococcoides Burtonii
Length = 500
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 269/470 (57%), Gaps = 12/470 (2%)
Query: 35 EVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAA 94
++ +TNDGATILK + I +PAAK++V++SK QD EVGDGTT+ VL+GELL +AE+L+
Sbjct: 8 DIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMK 67
Query: 95 KIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHF 154
+H I G+R AAE R+ L + + E + L+KIA T ++ K KE
Sbjct: 68 GVHSTIISEGYRHAAEKCREILETITIAISPDDE---AALIKIAGTAITGKGAEAYKEKL 124
Query: 155 GQLAVDAVMRLKGSTN-------LESIQIIKKPGGSLKDSFLDEGFILDK-KIGIGQPKR 206
L V AV + LE+I+I K+ GGS+ DS L +G ++DK + P++
Sbjct: 125 SALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPEK 184
Query: 207 IENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFV 266
+ENAKIL+ + ++ K ++ + +++ S + E++ MRE +K+IA G N
Sbjct: 185 VENAKILLLSCPVEFRKTEV-DSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVF 243
Query: 267 NRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEE 326
++ I + + AGI A+ ++RL+ VTG I D + +G L+EE
Sbjct: 244 CQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEE 303
Query: 327 IMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 386
+ K+ + +G + +A T++L G + HV+D + +L+DAL V+ + D +V+ GGG
Sbjct: 304 KEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGG 363
Query: 387 WPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK 446
E+ ++ + E A G++ A+ F+ AL IP +A+NAGLD +++ +LR++H+K
Sbjct: 364 SSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEK 423
Query: 447 EGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEII 496
AG++V +G V DM E + E ++K + +A EA MILR+D+++
Sbjct: 424 GNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVV 473
>pdb|3IYG|D Chain D, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 518
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 281/509 (55%), Gaps = 20/509 (3%)
Query: 1 MASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLV 60
++ A A+AD ++T+LGPKGMDK++Q G+G +VT+TNDGATILK + + +PAA++LV
Sbjct: 14 FSNISAAKAVADAIRTSLGPKGMDKMIQD-GKG-DVTITNDGATILKQMQVLHPAARMLV 71
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKV 120
++SK QD E GDGTTSVV++AG LL KL+ IHP I F+ A E ++ +
Sbjct: 72 ELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKG----IEIL 127
Query: 121 VDNKENAE-TFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL-----KGSTNLESI 174
D E + + L+ A T+L+SK++SQ ++VDAVM++ S +L I
Sbjct: 128 TDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDI 187
Query: 175 QIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234
+I+KK GG++ D L EG +L +K+ R+E AKI + + K + ++ V
Sbjct: 188 KIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDN-QIVVS 246
Query: 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCF-----VNRQLIYNFPEELFADAGILAIEH 289
+ + E+ + V++I G N + R + + I+ ++
Sbjct: 247 DYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKD 306
Query: 290 ADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMI-GEDKLIHFSGV-EMGQACT 347
+ + IE + G + + D + LG +L EE+ + G KLI +G G+ T
Sbjct: 307 IEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVT 366
Query: 348 IVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKK 407
IV+RG++ V++EAERS+HDALCV+ V ++ GGG PE+ +A + E +R G +
Sbjct: 367 IVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGME 426
Query: 408 SHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELG 467
S+ I AF+ A+ IP+T+A+NAGL+ + +LR H + GI+V G + ++ E
Sbjct: 427 SYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEL 486
Query: 468 ISESFKVKQAVLLSATEAAEMILRVDEII 496
+ + V + L ATE IL++D+++
Sbjct: 487 VVQPLLVSVSALTLATETVRSILKIDDVV 515
>pdb|3P9D|D Chain D, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|L Chain L, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|DD Chain d, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|LL Chain l, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|D Chain D, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|L Chain L, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|DD Chain d, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|LL Chain l, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 528
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 279/524 (53%), Gaps = 52/524 (9%)
Query: 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 61
A+ + A ++AD ++T+LGPKGMDK+++ T RG E+ ++NDG TILK + I +P A++LV+
Sbjct: 23 ANIIAARSVADAIRTSLGPKGMDKMIK-TSRG-EIIISNDGHTILKQMAILHPVARMLVE 80
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV 121
+S QD E GDGTTSVV+L G LL AE+L+ IHP I F+ AA+ + D LL+
Sbjct: 81 VSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMC- 139
Query: 122 DNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKG----STNLESIQII 177
+ + + + L++ A T+LSSKI+SQ LAVD+V+++ + +L I+++
Sbjct: 140 --HKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLV 197
Query: 178 KKPGGSLKDSFLDEGFILDKKI--GIGQPKRIENAKI-----------------LVANTA 218
KK GG++ D+ + +G +L + G P R E AKI ++ N
Sbjct: 198 KKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDY 257
Query: 219 MDTDKV----KIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNF 274
DK+ + Y + + +K +R+ V + H
Sbjct: 258 RQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALH-------------- 303
Query: 275 PEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKL 334
+ I+ ++ + + IE L+ G + + + +L L+EEI K+
Sbjct: 304 ---FLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKI 360
Query: 335 IHFSGVEMGQA---CTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMV 391
+ +G+ A ++V+RGA++ ++DE ERSLHDALCV+ V + ++ GGG PE+
Sbjct: 361 VRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIE 420
Query: 392 MAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPA 451
+++ + + AR G ++ + F+ AL IPTT+A+NAGL+S +++ +LR++H+
Sbjct: 421 ISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELND 480
Query: 452 GIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEI 495
GI V + E I + V + + A+E + ILR+D+I
Sbjct: 481 GISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 524
>pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 266/503 (52%), Gaps = 18/503 (3%)
Query: 6 GAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 65
A IAD+++T LGPK M K+L G + +TNDG IL+ + + +PAAK +++IS+
Sbjct: 17 AAKTIADIIRTCLGPKSMMKMLLDPMGG--IVMTNDGNAILREIQVQHPAAKSMIEISRT 74
Query: 66 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKE 125
QD+EVGDGTTSV++LAGE+L AE + ++HP +IS +R A D ++ +
Sbjct: 75 QDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKAL----DDMISTLKKISI 130
Query: 126 NAETFKSDLM-KIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKK----- 179
+T D M I +++++K++S+ +A+DAV ++ N IKK
Sbjct: 131 PVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVE 190
Query: 180 --PGGSLKDSFLDEGFILDKKIGIGQPKR-IENAKILVANTAMDTDKVKIYGARVRVDSM 236
PGG ++DS + G +++K + + +R I+N +I++ +++++ K + + +
Sbjct: 191 KIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE-SQTDIEITRE 249
Query: 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIE 296
I E++ +++ + II + + + I + + A I AI
Sbjct: 250 EDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNN 309
Query: 297 RLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASH 355
R+A G I S + +G L+E IG++ + + +ACTI+LRGAS
Sbjct: 310 RIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASK 369
Query: 356 HVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 415
+L E ER+L DA+ V + D +++ GGG EM +A + E ++ G + A +
Sbjct: 370 EILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVA 429
Query: 416 RALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPA-GIDVISGSVGDMAELGISESFKV 474
+AL IP T+ N G + L+ LRA+H +E C G++ +G++ DM ELGI E V
Sbjct: 430 QALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAV 489
Query: 475 KQAVLLSATEAAEMILRVDEIIT 497
K +A E A ++LR+D+I++
Sbjct: 490 KLQTYKTAVETAVLLLRIDDIVS 512
>pdb|3IYG|Z Chain Z, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 517
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 271/508 (53%), Gaps = 30/508 (5%)
Query: 7 AMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQ 66
A + D+++T LGPKG K+L S G G ++ +T DG +L + I +P A ++ ++ Q
Sbjct: 19 ARGLQDVLRTNLGPKGTMKMLVS-GAG-DIKLTKDGNVLLHEMQIQHPTASLIAKVATAQ 76
Query: 67 DDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKEN 126
DD GDGTTS V++ GELL++A+ ++ +HP I GF A E A L Q V + +
Sbjct: 77 DDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMD 136
Query: 127 AETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS---TNLESIQIIKKPGGS 183
ET L+ +A T+L +K+ ++ + + VD+++ +K +L ++I++ S
Sbjct: 137 RET----LIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKS 192
Query: 184 LKDSFLDEGFILDKKIGIGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAA 240
D+ L G +LD G P KR+E+A IL N +++ +K ++ + S +
Sbjct: 193 ETDTSLIRGLVLDH--GARHPDMKKRVEDAYILTCNVSLEYEKTEV-NSGFFYKSAEERE 249
Query: 241 EIEGAEKQKMREKVQKIIA----------HGINCFVNRQLIYNFPEELFADAGILAIEHA 290
++ AE++ + ++V+KII G +N++ I F + A GI+A+ A
Sbjct: 250 KLVKAERKFIEDRVKKIIELKKKVCGDSDKGF-VVINQKGIDPFSLDALAKEGIIALRRA 308
Query: 291 DFDGIERLALVTGGEIASTFD--NPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTI 348
+ERL L GG ++ D NP+ + LGH + E +GE+K ++ T+
Sbjct: 309 KRRNMERLTLACGGIALNSLDDLNPDCL-LGHAG-VYEYTLGEEKFTFIEKCNNPRSVTL 366
Query: 349 VLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 408
+++G + H L + + ++ D L + ++D V+ G G E+ MA+ + + G+
Sbjct: 367 LIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQ 426
Query: 409 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGI 468
++AF+ AL+ IP +A N+G D E + +++AEH + G G+D+ +G AE GI
Sbjct: 427 LGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGI 486
Query: 469 SESFKVKQAVLLSATEAAEMILRVDEII 496
+++ VK+ +L S T A IL VDEI+
Sbjct: 487 WDNYCVKKQLLHSCTVIATNILLVDEIM 514
>pdb|3P9D|F Chain F, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|N Chain N, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|FF Chain f, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|NN Chain n, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|F Chain F, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|N Chain N, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|FF Chain f, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|NN Chain n, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 546
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 269/518 (51%), Gaps = 37/518 (7%)
Query: 7 AMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQ 66
A + +++T LGPKG K+L G G + +T DG +L + I +P A ++ + Q
Sbjct: 26 AEGLQSVLETNLGPKGTLKMLVD-GAG-NIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQ 83
Query: 67 DDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKEN 126
D+ GDGTT+VV L GELLR+A + + +HP I GF +A + + L + +K N
Sbjct: 84 DEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESM-KFLDEFKISKTN 142
Query: 127 AETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGST----NLESIQIIKKPGG 182
+ L+++A ++L +K+ + E + DAV+ + + +L ++I++
Sbjct: 143 LSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHL 202
Query: 183 SLKDSFLDEGFILDKKIGIGQ----PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSK 238
S KD+ +G +LD G+ P R++NA +L+ N +++ +K ++ + S +
Sbjct: 203 SPKDTTFIKGLVLDHG---GRHPDMPTRVKNAYVLILNVSLEYEKTEV-NSGFFYSSADQ 258
Query: 239 AAEIEGAEKQKMREKVQKII-----AHGIN-----CFVNRQLIYNFPEELFADAGILAIE 288
++ +E++ + K++KII G++ +N++ I ++FA ILA+
Sbjct: 259 RDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALR 318
Query: 289 HADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTI 348
A +ERL LVTGGE ++ ++ LG L+ + IGE+K + + ++CTI
Sbjct: 319 RAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTI 378
Query: 349 VLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK-----EVDELARKT 403
+++G++H+ L + + ++ D L ++ + D ++ G G + +++ +++L K
Sbjct: 379 LIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAK- 437
Query: 404 PGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLR-----AEHQKEGCPAGIDVISG 458
GK IEAF+ AL+ IP T+ N+G D +++A + A+ E G+D+ G
Sbjct: 438 -GKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIG 496
Query: 459 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEII 496
D GI +S++V + + AT A +L DE++
Sbjct: 497 DSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELL 534
>pdb|3IYG|Q Chain Q, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 512
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 247/493 (50%), Gaps = 12/493 (2%)
Query: 10 IADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 69
+A +T GP GM+K++ ++ VTND ATIL+ L + +PAAK++V S +Q+ E
Sbjct: 23 LAQTTRTAYGPNGMNKMV--INHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80
Query: 70 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAET 129
VGDGT V+V AG LL AE+L+ + +I G+ +A + A + L V + +N
Sbjct: 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRD 140
Query: 130 FKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL---KGSTNLESIQIIKKPGGSLKD 186
++ + T++ SK ++ +L A + + G N+++I++ K G +
Sbjct: 141 V-DEVSSLLHTSVMSKQYG-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHS 198
Query: 187 SFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAE 246
S + G + K+ G +++AKI V + D + G V + S + E
Sbjct: 199 SSVLHGMVFKKETE-GDVTSVKDAKIAVYSCPFDGMITETKGT-VLIKSAEELMNFSKGE 256
Query: 247 KQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEI 306
+ M +V+ I G N V + + I+ + + RL G
Sbjct: 257 ENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATA 316
Query: 307 ASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSG-VEMGQACTIVLRGASHHVLDEAERSL 365
+ P ++GHC + +G+ +++ F E G TIVLRG++ +++D+ ER++
Sbjct: 317 LPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAV 376
Query: 366 HDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTI 425
D + D R++ GGG E+ +AK++ PG + +AI+ F+ A AIP +
Sbjct: 377 DDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRAL 436
Query: 426 ADNAGLDSAELIAQLRAEHQKEGCPAGIDVIS--GSVGDMAELGISESFKVKQAVLLSAT 483
A+N+G+ + E+I++L A HQ+ G+D+ + +V DM E G+ +++ K + AT
Sbjct: 437 AENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLAT 496
Query: 484 EAAEMILRVDEII 496
AA +LRVD+II
Sbjct: 497 NAAVTVLRVDQII 509
>pdb|3P9D|H Chain H, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|P Chain P, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|HH Chain h, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|PP Chain p, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|H Chain H, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|P Chain P, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|HH Chain h, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|PP Chain p, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 568
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 252/509 (49%), Gaps = 35/509 (6%)
Query: 16 TTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGT 74
T++GP G +KI+ G+ + +TND AT+L+ L I +PA KVLV ++ Q ++GDGT
Sbjct: 44 TSMGPCGRNKIIVNHLGK---IIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGT 100
Query: 75 TSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDL 134
V++LAGELL +EKL++ + + II G+ MA + L + VV + K++L
Sbjct: 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKND-KNEL 159
Query: 135 MKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGST---------NLESIQIIKKPGGSLK 185
+K+ +SSK + + +L +AV + N++SI+++K GGSL
Sbjct: 160 LKMIKPVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS 218
Query: 186 DSFLDEGFILDKKIGIGQPKRI---ENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEI 242
+S + +G + +++ G K + + K+ V +D + G V + + + +
Sbjct: 219 NSTVIKGMVFNREPE-GHVKSLSEDKKHKVAVFTCPLDIANTETKGT-VLLHNAQEMLDF 276
Query: 243 EGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 302
E++++ +++I G+ C V + GIL ++ + RL V
Sbjct: 277 SKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVC 336
Query: 303 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGV--EMGQACTIVLRGASHHVLDE 360
G P +LG + ++ + IG D++ F E+ + TI+LRGA+ + LD+
Sbjct: 337 GATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDD 396
Query: 361 AERSLHDALCVLSQTVNDS--RVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418
ER++ D + + + S ++L G G E+ + + + +TPG AI+ F+ A
Sbjct: 397 IERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAF 456
Query: 419 VAIPTTIADNAGLDSAELIAQLRAEH--------QKEGCPAGIDVISGS---VGDMAELG 467
+P T+A+ AGLD E++ L A H + + G+D+ S V D+ E
Sbjct: 457 EVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREEN 516
Query: 468 ISESFKVKQAVLLSATEAAEMILRVDEII 496
I + K+ + ATEAA +L +D+II
Sbjct: 517 IYDMLATKKFAINVATEAATTVLSIDQII 545
>pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|K Chain K, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|CC Chain c, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|KK Chain k, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|C Chain C, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|K Chain K, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|CC Chain c, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|KK Chain k, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 590
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 185/358 (51%), Gaps = 33/358 (9%)
Query: 1 MASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLV 60
+++ A A+AD+++T LGPK M K+L G + +TNDG IL+ + + +PAAK ++
Sbjct: 22 ISNITAAKAVADVIRTCLGPKAMLKMLLDPMGG--LVLTNDGHAILREIDVAHPAAKSML 79
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLRE-AEKLVAAKIHPMTIISGFRMAAECARDALLQ- 118
++S+ QD+EVGDGTT+V++LAGE+L + A L+ IHP+ II + A A + + Q
Sbjct: 80 ELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQV 139
Query: 119 -KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLK--------GST 169
K VD + +A + K+ ++ +K + E +LA+DAV ++ G
Sbjct: 140 SKPVDVENDAA-----MKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEP 194
Query: 170 NLE-----SIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPK---RIENAKILVANTAMDT 221
N E +++ K PGG + DS + +G +L+K + PK IEN ++++ + ++
Sbjct: 195 NFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKD--VVHPKMSRHIENPRVVLLDCPLEY 252
Query: 222 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFAD 281
K + + ++ I E+++++ ++I+A + + + + +
Sbjct: 253 KKGE-SQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLK 311
Query: 282 AGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLG-HCKLIEEIMIGEDKLIHFS 338
G + R+A VTG I + ++ + +G +C L + MIG++ +FS
Sbjct: 312 GGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDE---YFS 366
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%)
Query: 344 QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKT 403
+ACTI+LRG S +L+E +R+L DA+ V + + GGG EM ++ ++ E A++
Sbjct: 431 KACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQL 490
Query: 404 PGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDM 463
G + +A + A+ IP T+ NAG D L++QLRA+H + GID G + DM
Sbjct: 491 EGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDM 550
Query: 464 AELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497
GI E +KQ + +A E+A ++LRVD+I++
Sbjct: 551 VSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVS 584
>pdb|3RTK|A Chain A, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
pdb|3RTK|B Chain B, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
Length = 546
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 234/559 (41%), Gaps = 114/559 (20%)
Query: 6 GAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVD 61
G A+AD VK TLGPKG + +L+ + T+TNDG +I K + +++P A+++ +
Sbjct: 18 GLNALADAVKVTLGPKGRNVVLEK--KWGAPTITNDGVSIAKEIELEDPYEKIGAELVKE 75
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ--K 119
++K DD GDGTT+ VLA L+RE + VAA +P+ + G A E + LL+ K
Sbjct: 76 VAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAK 135
Query: 120 VVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKG-------STNLE 172
V+ KE +IA T +S + G L +A+ ++ +N
Sbjct: 136 EVETKE----------QIAATA----AISAGDQSIGDLIAEAMDKVGNEGVITVEESNTF 181
Query: 173 SIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKR----IENAKILVANTAMDTDKVKIYG 228
+Q+ G ++ F+ D P+R +E+ IL+ ++ + T K
Sbjct: 182 GLQLELTEGMRFDKGYISGYFVTD-------PERQEAVLEDPYILLVSSKVSTVK----- 229
Query: 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIE 288
D + ++ GA K + IIA + L+ N F + A
Sbjct: 230 -----DLLPLLEKVIGAGKPLL------IIAEDVEGEALSTLVVNKIRGTFKSVAVKAPG 278
Query: 289 HADFDG--IERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSG-- 339
D ++ +A++TGG++ S T +N + LG + ++++ +D+ G
Sbjct: 279 FGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKAR---KVVVTKDETTIVEGAG 335
Query: 340 --------------------------------VEMGQACTIVLRGASHHV-LDEAERSLH 366
++ ++ GA+ V L E + +
Sbjct: 336 DTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIE 395
Query: 367 DALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIA 426
DA+ V + ++ GGG + A +DEL K G ++ AL A IA
Sbjct: 396 DAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDEL--KLEGDEATGANIVKVALEAPLKQIA 452
Query: 427 DNAGLDS---AELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSAT 483
N+GL+ AE + L A H G++ +G D+ G+++ KV ++ L +A
Sbjct: 453 FNSGLEPGVVAEKVRNLPAGH-------GLNAQTGVYEDLLAAGVADPVKVTRSALQNAA 505
Query: 484 EAAEMILRVDEIITCAPRR 502
A + L + ++ P +
Sbjct: 506 SIAGLFLTTEAVVADKPEK 524
>pdb|1WE3|A Chain A, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|B Chain B, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|C Chain C, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|D Chain D, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|E Chain E, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|F Chain F, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|G Chain G, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|H Chain H, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|I Chain I, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|J Chain J, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|K Chain K, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|L Chain L, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|M Chain M, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|N Chain N, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|AA Chain a, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|BB Chain b, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|CC Chain c, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|DD Chain d, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|EE Chain e, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|FF Chain f, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|GG Chain g, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|HH Chain h, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|II Chain i, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|JJ Chain j, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|KK Chain k, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|LL Chain l, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|MM Chain m, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|NN Chain n, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 6 GAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSL----HIDNPAAKVLVD 61
G A+A+ VK TLGP+G + +L+ + T+T DG T+ K + H++N A++L +
Sbjct: 18 GVNAVANAVKVTLGPRGRNVVLEK--KFGSPTITKDGVTVAKEVELEDHLENIGAQLLKE 75
Query: 62 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECA 112
++ +D GDGTT+ VLA ++RE K VAA +P+ + G A E A
Sbjct: 76 VASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAA 126
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 343 GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARK 402
G I + A+ L E + DAL V + ++ GGG + V+EL +K
Sbjct: 372 GGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKK 430
Query: 403 TPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGD 462
G ++ + RAL IA+NAG + + ++ Q+ AE + G + +G D
Sbjct: 431 LEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRY--GFNAATGEFVD 488
Query: 463 MAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 504
M E GI + KV ++ L +A +IL + ++ P ++E
Sbjct: 489 MVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKE 530
>pdb|1SJP|A Chain A, Mycobacterium Tuberculosis Chaperonin60.2
pdb|1SJP|B Chain B, Mycobacterium Tuberculosis Chaperonin60.2
Length = 504
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 216/528 (40%), Gaps = 112/528 (21%)
Query: 37 TVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLV 92
T+TNDG +I K + +++P A+++ +++K DD GDGTT+ VLA L+RE + V
Sbjct: 5 TITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNV 64
Query: 93 AAKIHPMTIISGFRMAAECARDALLQ--KVVDNKENAETFKSDLMKIAMTTLSSKILSQD 150
AA +P+ + G A E + LL+ K V+ KE +IA T +S
Sbjct: 65 AAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKE----------QIAATA----AISAG 110
Query: 151 KEHFGQLAVDAVMRLKG-------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ 203
+ G L +A+ ++ +N +Q+ G ++ F+ D
Sbjct: 111 DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTD------- 163
Query: 204 PKR----IENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIA 259
P+R +E+ IL+ ++ + T K D + ++ GA K + IIA
Sbjct: 164 PERQEAVLEDPYILLVSSKVSTVK----------DLLPLLEKVIGAGKPLL------IIA 207
Query: 260 HGINCFVNRQLIYNFPEELFADAGILAIEHADFDG--IERLALVTGGEIAS-----TFDN 312
+ L+ N F + A D ++ +A++TGG++ S T +N
Sbjct: 208 EDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLEN 267
Query: 313 PESVKLGHCKLIEEIMIGEDKLIHFSG--------------------------------- 339
+ LG + ++++ +D+ G
Sbjct: 268 ADLSLLGKAR---KVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQER 324
Query: 340 -VEMGQACTIVLRGASHHV-LDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVD 397
++ ++ GA+ V L E + + DA+ V + ++ GGG + A +D
Sbjct: 325 LAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLD 383
Query: 398 ELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDS---AELIAQLRAEHQKEGCPAGID 454
EL K G ++ AL A IA N+GL+ AE + L A H G++
Sbjct: 384 EL--KLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGH-------GLN 434
Query: 455 VISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 502
+G D+ G+++ KV ++ L +A A + L + ++ P +
Sbjct: 435 AQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEK 482
>pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome
Length = 159
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 192 GFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKM 250
G I+DK K+ G P +++AKI + + ++ K + + +R++ S + E+ +
Sbjct: 3 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPE-FDTNLRIEDPSMIQKFLAQEENML 61
Query: 251 REKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTF 310
RE V KI + G N + ++ I + + + AGI A+ +++LA TG I ST
Sbjct: 62 REMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTI 121
Query: 311 DNPESVKLGHCKLIEEIMIGEDKLIHFSG 339
D S LG + +E++ +GED + +G
Sbjct: 122 DEISSSDLGTAERVEQVKVGEDYMTFVTG 150
>pdb|1IOK|A Chain A, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|B Chain B, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|C Chain C, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|D Chain D, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|E Chain E, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|F Chain F, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|G Chain G, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
Length = 545
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 27/216 (12%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHI----DNPAAKVLV 60
G +AD VK TLGPKG + ++ +S G R +T DG ++ K + + +N A+++
Sbjct: 19 GVNILADAVKVTLGPKGRNVVIDKSFGAPR---ITKDGVSVAKEIELSDKFENMGAQMVR 75
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKV 120
+++ +DE GDGTT+ VLA ++RE K VAA ++PM + G D KV
Sbjct: 76 EVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGI--------DVATAKV 127
Query: 121 VDNKENAETFKSDLMKIAMTTLSSKILSQDKEHF-GQLAVDAVMRLKGSTNLESIQIIKK 179
V+ ++A +D ++A +S + E F GQ +A+ R+ E + +++
Sbjct: 128 VEAIKSAARPVNDSSEVAQVG----TISANGESFIGQQIAEAMQRVGN----EGVITVEE 179
Query: 180 PGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVA 215
G + + EG D+ G P + NA ++A
Sbjct: 180 NKGMETEVEVVEGMQFDR--GYLSPYFVTNADKMIA 213
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 5/158 (3%)
Query: 343 GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARK 402
G I + G + + E + + DAL V + V+ GG +V +V E
Sbjct: 374 GGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVV--GGGVALVQGAKVLEGLSG 431
Query: 403 TPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGD 462
+ I RAL A IA+NAG+D A + ++R K G + + GD
Sbjct: 432 ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDK---AFGFNAQTEEYGD 488
Query: 463 MAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 500
M + G+ + KV + L A A +++ + +I P
Sbjct: 489 MFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
>pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
pdb|1ASX|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
Length = 159
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 192 GFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKM 250
G ++DK K+ P ++NAKI + ++A++ K +I A+V++ SK + E
Sbjct: 3 GIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIE-AKVQISDPSKIQDFLNQETNTF 61
Query: 251 REKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTF 310
++ V+KI G N + ++ I + + A GI A+ +E+LA TG +I +
Sbjct: 62 KQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDL 121
Query: 311 DNPESVKLGHCKLIEEIMIGEDKLIHFSG 339
D+ LG + +EE IG+D++ G
Sbjct: 122 DDLTPSVLGEAETVEERKIGDDRMTFVMG 150
>pdb|3C9V|A Chain A, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|B Chain B, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|C Chain C, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|D Chain D, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|E Chain E, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|F Chain F, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|G Chain G, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|H Chain H, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|I Chain I, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|J Chain J, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|K Chain K, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|L Chain L, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|M Chain M, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|N Chain N, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
Length = 526
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEEL 130
>pdb|3CAU|A Chain A, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|B Chain B, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|C Chain C, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|D Chain D, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|E Chain E, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|F Chain F, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|G Chain G, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|H Chain H, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|I Chain I, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|J Chain J, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|K Chain K, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|L Chain L, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|M Chain M, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|N Chain N, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
Length = 526
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEEL 130
>pdb|1PCQ|A Chain A, Crystal Structure Of Groel-Groes
pdb|1PCQ|B Chain B, Crystal Structure Of Groel-Groes
pdb|1PCQ|C Chain C, Crystal Structure Of Groel-Groes
pdb|1PCQ|D Chain D, Crystal Structure Of Groel-Groes
pdb|1PCQ|E Chain E, Crystal Structure Of Groel-Groes
pdb|1PCQ|F Chain F, Crystal Structure Of Groel-Groes
pdb|1PCQ|G Chain G, Crystal Structure Of Groel-Groes
pdb|1PCQ|H Chain H, Crystal Structure Of Groel-Groes
pdb|1PCQ|I Chain I, Crystal Structure Of Groel-Groes
pdb|1PCQ|J Chain J, Crystal Structure Of Groel-Groes
pdb|1PCQ|K Chain K, Crystal Structure Of Groel-Groes
pdb|1PCQ|L Chain L, Crystal Structure Of Groel-Groes
pdb|1PCQ|M Chain M, Crystal Structure Of Groel-Groes
pdb|1PCQ|N Chain N, Crystal Structure Of Groel-Groes
pdb|1PF9|A Chain A, Groel-Groes-Adp
pdb|1PF9|B Chain B, Groel-Groes-Adp
pdb|1PF9|C Chain C, Groel-Groes-Adp
pdb|1PF9|D Chain D, Groel-Groes-Adp
pdb|1PF9|E Chain E, Groel-Groes-Adp
pdb|1PF9|F Chain F, Groel-Groes-Adp
pdb|1PF9|G Chain G, Groel-Groes-Adp
pdb|1PF9|H Chain H, Groel-Groes-Adp
pdb|1PF9|I Chain I, Groel-Groes-Adp
pdb|1PF9|J Chain J, Groel-Groes-Adp
pdb|1PF9|K Chain K, Groel-Groes-Adp
pdb|1PF9|L Chain L, Groel-Groes-Adp
pdb|1PF9|M Chain M, Groel-Groes-Adp
pdb|1PF9|N Chain N, Groel-Groes-Adp
pdb|1SVT|A Chain A, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|B Chain B, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|C Chain C, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|D Chain D, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|E Chain E, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|F Chain F, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|G Chain G, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|H Chain H, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|I Chain I, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|J Chain J, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|K Chain K, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|L Chain L, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|M Chain M, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|N Chain N, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SX4|A Chain A, Groel-Groes-Adp7
pdb|1SX4|B Chain B, Groel-Groes-Adp7
pdb|1SX4|C Chain C, Groel-Groes-Adp7
pdb|1SX4|D Chain D, Groel-Groes-Adp7
pdb|1SX4|E Chain E, Groel-Groes-Adp7
pdb|1SX4|F Chain F, Groel-Groes-Adp7
pdb|1SX4|G Chain G, Groel-Groes-Adp7
pdb|1SX4|H Chain H, Groel-Groes-Adp7
pdb|1SX4|I Chain I, Groel-Groes-Adp7
pdb|1SX4|J Chain J, Groel-Groes-Adp7
pdb|1SX4|K Chain K, Groel-Groes-Adp7
pdb|1SX4|L Chain L, Groel-Groes-Adp7
pdb|1SX4|M Chain M, Groel-Groes-Adp7
pdb|1SX4|N Chain N, Groel-Groes-Adp7
pdb|2YNJ|A Chain A, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|B Chain B, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|C Chain C, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|D Chain D, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|E Chain E, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|F Chain F, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|G Chain G, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|H Chain H, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|I Chain I, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|J Chain J, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|K Chain K, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|L Chain L, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|M Chain M, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|N Chain N, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
Length = 524
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEEL 130
>pdb|1AON|A Chain A, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|B Chain B, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|C Chain C, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|D Chain D, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|E Chain E, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|F Chain F, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|G Chain G, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|H Chain H, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|I Chain I, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|J Chain J, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|K Chain K, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|L Chain L, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|M Chain M, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|N Chain N, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1GRU|A Chain A, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|B Chain B, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|C Chain C, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|D Chain D, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|E Chain E, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|F Chain F, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|G Chain G, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|H Chain H, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|I Chain I, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|J Chain J, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|K Chain K, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|L Chain L, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|M Chain M, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|N Chain N, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1MNF|A Chain A, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|B Chain B, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|C Chain C, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|D Chain D, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|E Chain E, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|F Chain F, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|G Chain G, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|H Chain H, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|I Chain I, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|J Chain J, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|K Chain K, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|L Chain L, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|M Chain M, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|N Chain N, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1XCK|A Chain A, Crystal Structure Of Apo Groel
pdb|1XCK|B Chain B, Crystal Structure Of Apo Groel
pdb|1XCK|C Chain C, Crystal Structure Of Apo Groel
pdb|1XCK|D Chain D, Crystal Structure Of Apo Groel
pdb|1XCK|E Chain E, Crystal Structure Of Apo Groel
pdb|1XCK|F Chain F, Crystal Structure Of Apo Groel
pdb|1XCK|G Chain G, Crystal Structure Of Apo Groel
pdb|1XCK|H Chain H, Crystal Structure Of Apo Groel
pdb|1XCK|I Chain I, Crystal Structure Of Apo Groel
pdb|1XCK|J Chain J, Crystal Structure Of Apo Groel
pdb|1XCK|K Chain K, Crystal Structure Of Apo Groel
pdb|1XCK|L Chain L, Crystal Structure Of Apo Groel
pdb|1XCK|M Chain M, Crystal Structure Of Apo Groel
pdb|1XCK|N Chain N, Crystal Structure Of Apo Groel
pdb|2C7C|A Chain A, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|B Chain B, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|C Chain C, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|D Chain D, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|E Chain E, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|F Chain F, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|G Chain G, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|H Chain H, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|I Chain I, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|J Chain J, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|K Chain K, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|L Chain L, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|M Chain M, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|N Chain N, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7D|A Chain A, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|B Chain B, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|C Chain C, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|D Chain D, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|E Chain E, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|F Chain F, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|G Chain G, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|H Chain H, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|I Chain I, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|J Chain J, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|K Chain K, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|L Chain L, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|M Chain M, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|N Chain N, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2CGT|A Chain A, Groel-Adp-Gp31 Complex
pdb|2CGT|B Chain B, Groel-Adp-Gp31 Complex
pdb|2CGT|C Chain C, Groel-Adp-Gp31 Complex
pdb|2CGT|D Chain D, Groel-Adp-Gp31 Complex
pdb|2CGT|E Chain E, Groel-Adp-Gp31 Complex
pdb|2CGT|F Chain F, Groel-Adp-Gp31 Complex
pdb|2CGT|G Chain G, Groel-Adp-Gp31 Complex
pdb|2CGT|H Chain H, Groel-Adp-Gp31 Complex
pdb|2CGT|I Chain I, Groel-Adp-Gp31 Complex
pdb|2CGT|J Chain J, Groel-Adp-Gp31 Complex
pdb|2CGT|K Chain K, Groel-Adp-Gp31 Complex
pdb|2CGT|L Chain L, Groel-Adp-Gp31 Complex
pdb|2CGT|M Chain M, Groel-Adp-Gp31 Complex
pdb|2CGT|N Chain N, Groel-Adp-Gp31 Complex
pdb|2NWC|A Chain A, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|B Chain B, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|C Chain C, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|D Chain D, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|E Chain E, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|F Chain F, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|G Chain G, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|H Chain H, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|I Chain I, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|J Chain J, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|K Chain K, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|L Chain L, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|M Chain M, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|N Chain N, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|3E76|A Chain A, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|B Chain B, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|C Chain C, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|D Chain D, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|E Chain E, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|F Chain F, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|G Chain G, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|H Chain H, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|I Chain I, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|J Chain J, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|K Chain K, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|L Chain L, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|M Chain M, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|N Chain N, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
Length = 547
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEEL 130
>pdb|1J4Z|A Chain A, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|B Chain B, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|C Chain C, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|D Chain D, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|E Chain E, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|F Chain F, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|G Chain G, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|H Chain H, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|I Chain I, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|J Chain J, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|K Chain K, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|L Chain L, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|M Chain M, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|N Chain N, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|O Chain O, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|P Chain P, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Q Chain Q, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|R Chain R, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|S Chain S, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|T Chain T, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|U Chain U, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|V Chain V, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|W Chain W, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|X Chain X, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Y Chain Y, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Z Chain Z, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|1 Chain 1, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|2 Chain 2, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
Length = 547
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEEL 130
>pdb|1SX3|A Chain A, Groel14-(Atpgammas)14
pdb|1SX3|B Chain B, Groel14-(Atpgammas)14
pdb|1SX3|C Chain C, Groel14-(Atpgammas)14
pdb|1SX3|D Chain D, Groel14-(Atpgammas)14
pdb|1SX3|E Chain E, Groel14-(Atpgammas)14
pdb|1SX3|F Chain F, Groel14-(Atpgammas)14
pdb|1SX3|G Chain G, Groel14-(Atpgammas)14
pdb|1SX3|H Chain H, Groel14-(Atpgammas)14
pdb|1SX3|I Chain I, Groel14-(Atpgammas)14
pdb|1SX3|J Chain J, Groel14-(Atpgammas)14
pdb|1SX3|K Chain K, Groel14-(Atpgammas)14
pdb|1SX3|L Chain L, Groel14-(Atpgammas)14
pdb|1SX3|M Chain M, Groel14-(Atpgammas)14
pdb|1SX3|N Chain N, Groel14-(Atpgammas)14
Length = 525
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEEL 130
>pdb|2YEY|A Chain A, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|B Chain B, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|C Chain C, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|D Chain D, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|E Chain E, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|F Chain F, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|G Chain G, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|H Chain H, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|I Chain I, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|J Chain J, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|K Chain K, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|L Chain L, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|M Chain M, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|N Chain N, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
Length = 524
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEEL 130
>pdb|4AAQ|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
Length = 548
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 19 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 75
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 76 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEEL 131
>pdb|1SS8|A Chain A, Groel
pdb|1SS8|B Chain B, Groel
pdb|1SS8|C Chain C, Groel
pdb|1SS8|D Chain D, Groel
pdb|1SS8|E Chain E, Groel
pdb|1SS8|F Chain F, Groel
pdb|1SS8|G Chain G, Groel
Length = 524
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEEL 130
>pdb|2EU1|A Chain A, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|B Chain B, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|C Chain C, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|D Chain D, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|E Chain E, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|F Chain F, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|G Chain G, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|H Chain H, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|I Chain I, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|J Chain J, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|K Chain K, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|L Chain L, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|M Chain M, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|N Chain N, Crystal Structure Of The Chaperonin Groel-E461k
Length = 548
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 19 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 75
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 76 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEEL 131
>pdb|1OEL|A Chain A, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|B Chain B, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|C Chain C, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|D Chain D, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|E Chain E, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|F Chain F, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|G Chain G, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
Length = 547
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEEL 130
>pdb|1GRL|A Chain A, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|B Chain B, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|C Chain C, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|D Chain D, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|E Chain E, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|F Chain F, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|G Chain G, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
Length = 548
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 19 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 75
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 76 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEEL 131
>pdb|1GR5|A Chain A, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|B Chain B, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|C Chain C, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|D Chain D, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|E Chain E, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|F Chain F, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|G Chain G, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|H Chain H, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|I Chain I, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|J Chain J, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|K Chain K, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|L Chain L, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|M Chain M, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|N Chain N, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|2C7E|A Chain A, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|B Chain B, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|C Chain C, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|D Chain D, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|E Chain E, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|F Chain F, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|G Chain G, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|H Chain H, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|I Chain I, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|J Chain J, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|K Chain K, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|L Chain L, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|M Chain M, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|N Chain N, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
Length = 547
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEEL 130
>pdb|1KP8|A Chain A, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|B Chain B, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|C Chain C, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|D Chain D, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|E Chain E, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|F Chain F, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|G Chain G, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|H Chain H, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|I Chain I, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|J Chain J, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|K Chain K, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|L Chain L, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|M Chain M, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|N Chain N, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
Length = 547
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 GAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLV 60
G +AD VK TLGPKG + +L +S G T+T DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 61 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL 116
+++ +D GDGTT+ VLA ++ E K VAA ++PM + G A A + L
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEEL 130
>pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GN1|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|E Chain E, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|F Chain F, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|G Chain G, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|H Chain H, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
Length = 178
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 184 LKDSFLDEGFILDKKIGIGQPKR-IENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEI 242
++DS + G +++K + + +R I+N +I++ +++++ K + + + I
Sbjct: 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE-SQTDIEITREEDFTRI 59
Query: 243 EGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 302
E++ + + + II + + + I + + A + AI R+A
Sbjct: 60 LQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARAC 119
Query: 303 GGEIASTFDNPESVKLGH----CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGAS 354
G I S PE ++ L+E IG++ + + +ACTI+LRGAS
Sbjct: 120 GARIVS---RPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGAS 172
>pdb|1MG7|A Chain A, Crystal Structure Of Xol-1
pdb|1MG7|B Chain B, Crystal Structure Of Xol-1
Length = 417
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Query: 91 LVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 150
V +HP +M A+ LL+ +N+E+ +TF L+ MT S + Q+
Sbjct: 211 FVKTDLHPEDFTP--QMFPSQAKAKLLRDAFNNEEDEDTFPDILVPAYMTAHSKNRVRQE 268
Query: 151 KEHFGQLAVDAVMRLKGSTN----LESIQIIKKPGGSL----KDSFLDEGFILDKKIGIG 202
++ D+ + L+ N +E ++ + GG L KDSF D+ I I I
Sbjct: 269 DYTCLEVEFDSQVALEKLMNEHEQVEGFEV--QQGGILVALKKDSFFDDELIEKIAIAIA 326
Query: 203 QPKR 206
R
Sbjct: 327 TESR 330
>pdb|3FNN|A Chain A, Biochemical And Structural Analysis Of An Atypical Thyx:
Corynebacterium Glutamicum Nchu 87078 Depends On Thya
For Thymidine Biosynthesis
Length = 256
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 291 DFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIM-IGEDKLIHFSGVEMGQACTIV 349
D +G E L G TFD P + + IM +G L+ + T+
Sbjct: 34 DVEGAEALVEFAGRACYETFDKPNPRTASNAAYLRHIMEVGHTALLEHAN------ATMY 87
Query: 350 LRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDE 398
+RG S E R H + LSQ S G E+V+ +DE
Sbjct: 88 IRGISRSATHELVRHRHFSFSQLSQRFVHS------GESEVVVPTLIDE 130
>pdb|1ZO0|A Chain A, Nmr Structure Of Antizyme Isoform 1 From Rat
Length = 126
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 484 EAAEMILRVDEIITCAPRRREDR 506
E AE LR D + C P+ REDR
Sbjct: 68 EFAEEQLRADHVFICFPKNREDR 90
>pdb|3GE9|A Chain A, A Structurally Atypical Thyx From Corynebacterium
Glutamicum Nchu 87078 Is Not Required For Thymidylate
Biosynthesis
Length = 255
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 291 DFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIM-IGEDKLIHFSGVEMGQACTIV 349
D +G E L G TFD P + + IM +G L+ + T+
Sbjct: 33 DVEGAEALVEFAGRACYETFDKPNPRTASNAAYLRHIMEVGHTALLEHAN------ATMY 86
Query: 350 LRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDE 398
+RG S E R H + LSQ S G E+V+ +DE
Sbjct: 87 IRGISRSATHELVRHRHFSFSQLSQRFVHS------GESEVVVPTLIDE 129
>pdb|1YVP|A Chain A, Ro Autoantigen Complexed With Rnas
pdb|1YVP|B Chain B, Ro Autoantigen Complexed With Rnas
pdb|1YVR|A Chain A, Ro Autoantigen
pdb|2I91|A Chain A, 60kda Ro Autoantigen In Complex With A Fragment Of
Misfolded Rna
pdb|2I91|B Chain B, 60kda Ro Autoantigen In Complex With A Fragment Of
Misfolded Rna
Length = 538
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 32 RGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKL 91
R +T+ I KSL D P +L ++ K+ D V +S V E L + L
Sbjct: 255 REHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTADSVLAPASSEVSSVCERLTNEKLL 314
Query: 92 VAAKIHPMTII 102
A+IHP I+
Sbjct: 315 KKARIHPFHIL 325
>pdb|1LTK|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|C Chain C, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
Length = 425
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 89 EKLVAAKIHPMTIISGFRMAAE---CARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 145
+K+ AAK + + ++ R E DA KV NKE+ E F++DL K+A ++
Sbjct: 114 DKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDA 173
Query: 146 ILSQDKEHFGQLAVDAVMRLKG 167
+ + H + V ++ G
Sbjct: 174 FGTAHRAHSSXVGVKLNVKASG 195
>pdb|3OZA|A Chain A, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|B Chain B, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|C Chain C, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
Length = 424
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 89 EKLVAAKIHPMTIISGFRMAAE---CARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 145
+K+ AAK + + ++ R E DA KV NKE+ E F++DL K+A ++
Sbjct: 113 DKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDA 172
Query: 146 ILSQDKEHFGQLAVDAVMRLKG 167
+ + H + V ++ G
Sbjct: 173 FGTAHRAHSSXVGVKLNVKASG 194
>pdb|2WV7|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 329
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 158 AVDAVMRLKGSTNL-ESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVAN 216
AVD +RL TN E I I+ PG +K ++LD G+ + P + A L+ N
Sbjct: 208 AVDFDLRLSDFTNTNEEIDIVA-PGVGIKSTYLDSGYAELSGTAMAAP-HVAGALALIIN 265
Query: 217 TAMDTDK-----VKIYGARVR 232
A D K +IY VR
Sbjct: 266 LAEDAFKRSLSETEIYAQLVR 286
>pdb|2XRM|A Chain A, Processed Intracellular Subtilisin From B. Clausii
Length = 311
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 158 AVDAVMRLKGSTNL-ESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVAN 216
AVD +RL TN E I I+ PG +K ++LD G+ + P + A L+ N
Sbjct: 190 AVDFDLRLSDFTNTNEEIDIVA-PGVGIKSTYLDSGYAELSGTAMAAP-HVAGALALIIN 247
Query: 217 TAMDTDK-----VKIYGARVR 232
A D K +IY VR
Sbjct: 248 LAEDAFKRSLSETEIYAQLVR 268
>pdb|2X8J|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 158 AVDAVMRLKGSTNL-ESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVAN 216
AVD +RL TN E I I+ PG +K ++LD G+ + P + A L+ N
Sbjct: 208 AVDFDLRLSDFTNTNEEIDIVA-PGVGIKSTYLDSGYAELSGTAMAAP-HVAGALALIIN 265
Query: 217 TAMDTDK-----VKIYGARVR 232
A D K +IY VR
Sbjct: 266 LAEDAFKRSLSETEIYAQLVR 286
>pdb|2X8J|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 158 AVDAVMRLKGSTNL-ESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVAN 216
AVD +RL TN E I I+ PG +K ++LD G+ + P + A L+ N
Sbjct: 208 AVDFDLRLSDFTNTNEEIDIVA-PGVGIKSTYLDSGYAELSGTAMAAP-HVAGALALIIN 265
Query: 217 TAMDTDK-----VKIYGARVR 232
A D K +IY VR
Sbjct: 266 LAEDAFKRSLSETEIYAQLVR 286
>pdb|3OZ7|A Chain A, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
pdb|3OZ7|B Chain B, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
Length = 417
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 89 EKLVAAKIHPMTIISGFRMAAE---CARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 145
+K+ AAK + + ++ R E DA KV NKE+ E F++DL K+A ++
Sbjct: 107 DKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDA 166
Query: 146 ILSQDKEHFGQLAVDAVMRLKG 167
+ + H + V ++ G
Sbjct: 167 FGTAHRAHSSMVGVKLNVKASG 188
>pdb|2ICS|A Chain A, Crystal Structure Of An Adenine Deaminase
Length = 379
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 239 AAEIEGAEKQKMREKVQKIIAHG-----INCFVNRQLIYNFPEELFADAGILAIEHADFD 293
AA I G+ K+ + + ++ G ++CF L Y++P+E+ G+ + A
Sbjct: 33 AATISGSAKETIHLEPGTYVSAGWIDDHVHCFEKXALYYDYPDEIGVKKGVTTVIDAGTT 92
Query: 294 GIERL 298
G E +
Sbjct: 93 GAENI 97
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,566,884
Number of Sequences: 62578
Number of extensions: 551008
Number of successful extensions: 1829
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1606
Number of HSP's gapped (non-prelim): 91
length of query: 507
length of database: 14,973,337
effective HSP length: 103
effective length of query: 404
effective length of database: 8,527,803
effective search space: 3445232412
effective search space used: 3445232412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)