Query 010585
Match_columns 507
No_of_seqs 144 out of 1521
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 02:15:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010585.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010585hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03336 TCP1_beta TCP-1 (CTT o 100.0 3E-108 7E-113 869.7 58.6 498 2-501 17-516 (517)
2 PTZ00212 T-complex protein 1 s 100.0 7E-108 2E-112 869.1 58.1 500 2-503 26-530 (533)
3 TIGR02341 chap_CCT_beta T-comp 100.0 2E-106 3E-111 855.3 57.7 501 2-502 18-518 (519)
4 KOG0361 Chaperonin complex com 100.0 3E-108 6E-113 778.0 37.5 499 1-502 23-526 (543)
5 TIGR02347 chap_CCT_zeta T-comp 100.0 6E-106 1E-110 851.3 57.5 495 2-502 20-529 (531)
6 cd03340 TCP1_eta TCP-1 (CTT or 100.0 2E-105 4E-110 850.6 56.6 495 2-499 20-520 (522)
7 TIGR02344 chap_CCT_gamma T-com 100.0 2E-105 5E-110 850.8 56.2 494 2-501 20-524 (525)
8 TIGR02339 thermosome_arch ther 100.0 3E-105 6E-110 849.3 56.3 491 2-498 20-519 (519)
9 TIGR02342 chap_CCT_delta T-com 100.0 3E-105 6E-110 847.0 55.4 492 2-499 13-517 (517)
10 cd03335 TCP1_alpha TCP-1 (CTT 100.0 6E-105 1E-109 847.2 55.6 493 2-500 12-527 (527)
11 cd03343 cpn60 cpn60 chaperonin 100.0 4E-104 8E-109 841.6 56.0 491 2-498 19-516 (517)
12 TIGR02343 chap_CCT_epsi T-comp 100.0 4E-104 8E-109 839.3 54.9 493 2-498 31-531 (532)
13 KOG0363 Chaperonin complex com 100.0 2E-105 4E-110 753.6 39.4 505 2-506 22-526 (527)
14 TIGR02345 chap_CCT_eta T-compl 100.0 7E-104 1E-108 837.5 55.3 494 2-499 22-520 (522)
15 cd03339 TCP1_epsilon TCP-1 (CT 100.0 6E-104 1E-108 839.2 54.8 492 2-497 27-526 (526)
16 TIGR02346 chap_CCT_theta T-com 100.0 4E-103 8E-108 831.8 57.2 497 2-505 22-526 (531)
17 cd03338 TCP1_delta TCP-1 (CTT 100.0 2E-103 5E-108 834.3 55.3 491 2-498 12-515 (515)
18 TIGR02340 chap_CCT_alpha T-com 100.0 5E-103 1E-107 833.0 57.4 495 2-502 16-533 (536)
19 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 2E-101 3E-106 811.4 52.6 462 2-499 16-483 (484)
20 KOG0358 Chaperonin complex com 100.0 3E-101 7E-106 728.3 34.3 491 2-498 30-533 (534)
21 cd03337 TCP1_gamma TCP-1 (CTT 100.0 1.7E-99 4E-104 796.0 48.3 449 2-497 20-479 (480)
22 cd03341 TCP1_theta TCP-1 (CTT 100.0 8.5E-98 2E-102 781.5 50.5 452 2-498 12-471 (472)
23 cd00309 chaperonin_type_I_II c 100.0 2.6E-96 6E-101 772.6 51.4 449 2-497 12-464 (464)
24 COG0459 GroL Chaperonin GroEL 100.0 9.1E-96 2E-100 761.9 46.1 490 2-502 15-517 (524)
25 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 1.7E-94 3.7E-99 766.8 49.4 482 10-500 1-485 (485)
26 PRK12849 groEL chaperonin GroE 100.0 9.8E-90 2.1E-94 726.5 49.2 449 2-502 14-526 (542)
27 PRK00013 groEL chaperonin GroE 100.0 1.4E-89 2.9E-94 725.4 49.0 451 2-502 14-527 (542)
28 PTZ00114 Heat shock protein 60 100.0 7E-89 1.5E-93 723.7 50.7 451 2-502 26-543 (555)
29 PRK12851 groEL chaperonin GroE 100.0 1.1E-88 2.5E-93 719.1 49.2 450 2-502 15-527 (541)
30 KOG0364 Chaperonin complex com 100.0 1.4E-90 3.1E-95 667.2 28.5 497 1-503 22-525 (527)
31 cd03344 GroEL GroEL_like type 100.0 3.9E-88 8.5E-93 712.7 48.3 444 2-497 12-519 (520)
32 KOG0362 Chaperonin complex com 100.0 3.3E-88 7.2E-93 661.4 41.4 494 2-505 30-527 (537)
33 PRK12850 groEL chaperonin GroE 100.0 1.3E-87 2.9E-92 711.5 49.0 450 2-502 15-527 (544)
34 KOG0360 Chaperonin complex com 100.0 1.2E-89 2.5E-94 667.0 28.9 496 2-504 23-541 (545)
35 PRK12852 groEL chaperonin GroE 100.0 2.6E-87 5.6E-92 711.1 49.0 450 2-502 15-528 (545)
36 TIGR02348 GroEL chaperonin Gro 100.0 5.2E-87 1.1E-91 705.6 49.2 447 2-500 13-523 (524)
37 CHL00093 groEL chaperonin GroE 100.0 1.2E-85 2.5E-90 696.1 46.4 449 4-501 16-527 (529)
38 PRK14104 chaperonin GroEL; Pro 100.0 5E-85 1.1E-89 691.2 48.4 450 2-502 15-528 (546)
39 PLN03167 Chaperonin-60 beta su 100.0 8.9E-85 1.9E-89 692.6 45.0 451 4-502 72-584 (600)
40 KOG0359 Chaperonin complex com 100.0 4.8E-83 1.1E-87 614.3 29.1 487 3-500 22-516 (520)
41 KOG0357 Chaperonin complex com 100.0 8.6E-67 1.9E-71 487.9 21.8 364 1-500 31-397 (400)
42 KOG0356 Mitochondrial chaperon 100.0 2.3E-51 5.1E-56 408.7 31.0 447 4-503 30-541 (550)
43 cd03334 Fab1_TCP TCP-1 like do 100.0 3.9E-39 8.3E-44 311.5 25.2 227 148-382 17-257 (261)
44 cd03333 chaperonin_like chaper 100.0 1.2E-35 2.6E-40 279.9 22.9 204 132-378 2-209 (209)
45 KOG0230 Phosphatidylinositol-4 99.8 8.4E-20 1.8E-24 200.5 15.5 232 149-388 332-576 (1598)
46 cd00851 MTH1175 This uncharact 53.2 42 0.00091 26.9 5.9 43 253-297 55-97 (103)
47 PF02579 Nitro_FeMo-Co: Dinitr 52.9 44 0.00095 26.2 5.8 43 253-297 45-87 (94)
48 COG1433 Uncharacterized conser 49.2 70 0.0015 27.1 6.6 40 253-293 57-96 (121)
49 cd00562 NifX_NifB This CD repr 42.8 87 0.0019 24.9 6.2 38 253-291 53-90 (102)
50 COG3962 Acetolactate synthase 29.1 51 0.0011 34.5 3.1 41 362-403 216-256 (617)
51 PF07141 Phage_term_sma: Putat 25.2 1.8E+02 0.004 24.7 5.2 67 79-146 15-82 (174)
52 PF07526 POX: Associated with 24.0 1.8E+02 0.0039 25.3 5.2 45 357-401 85-129 (140)
53 smart00574 POX domain associat 23.0 1.5E+02 0.0032 25.7 4.4 46 356-401 84-129 (140)
54 KOG2663 Acetolactate synthase, 21.7 91 0.002 29.8 3.1 27 346-373 121-147 (309)
55 PF07278 DUF1441: Protein of u 21.2 1.8E+02 0.0039 25.7 4.6 67 352-434 60-126 (152)
No 1
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3e-108 Score=869.72 Aligned_cols=498 Identities=77% Similarity=1.126 Sum_probs=478.3
Q ss_pred ccHHHHHHHHHHhhhcCCCcccccccccc--CCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQST--GRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV 79 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~--~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vl 79 (507)
+|+.||..++++++|||||+||+|||+++ . |+++|||||+||+++|+++||+++|++++|++|++++||||||+|+
T Consensus 17 ~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~--g~~~iTnDG~tIlk~l~~~hP~akll~~~a~~qd~~~GDGTTtvvv 94 (517)
T cd03336 17 SSFVGAIAIGDLVKTTLGPKGMDKILQSVGRS--GGVTVTNDGATILKSIGVDNPAAKVLVDISKVQDDEVGDGTTSVTV 94 (517)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCceEeecCCCC--CCeEEeccHHHHHHHccCcChHHHHHHHHHHHHHhHhCCChhHHHH
Confidence 58999999999999999999999999997 5 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 80 LAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 80 L~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
|+++||+++.+|+++|+||+.|++||+.|.+.+++.|+++++|++.+.+.+++.|+++++|+++||+.+.++++|+++++
T Consensus 95 La~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~~~~~~~l~~l~~ 174 (517)
T cd03336 95 LAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKILTQDKEHFAELAV 174 (517)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988543222357899999999999999999999999999
Q ss_pred HHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCHHHH
Q 010585 160 DAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKA 239 (507)
Q Consensus 160 ~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l 239 (507)
+|+..+++.+++++|++++++|++++||++++|+++++++.+.||++++||||++++++|++++++.++.++.+++++++
T Consensus 175 ~A~~~v~~~~~~~~i~i~ki~G~s~~ds~l~~G~v~~~~~~~~~~~~~~n~kIli~~~~le~~~~~~~~~~~~~~~~~~~ 254 (517)
T cd03336 175 DAVLRLKGSGNLDAIQIIKKLGGSLKDSYLDEGFLLDKKIGVNQPKRIENAKILIANTPMDTDKIKIFGAKVRVDSTAKV 254 (517)
T ss_pred HHHHHhhccCCccceeEEEccCCCccceEEEeeEEEecccCCCCCCeeccccEEEEecCCCcccccccCceEEeCCHHHH
Confidence 99999987888999999999999999999999999999876678999999999999999999998875578899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCcc
Q 010585 240 AEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLG 319 (507)
Q Consensus 240 ~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG 319 (507)
..+++.|+++++++++.|++.++++++++++|+|.+++||.++||++++++++++|+|||++|||+++++++++++..+|
T Consensus 255 ~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~~I~av~~v~~~~L~rIa~~tGa~ii~~l~~~~~~~LG 334 (517)
T cd03336 255 AEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADAGIMAIEHADFDGVERLALVTGGEIASTFDHPELVKLG 334 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCEEecccCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHH
Q 010585 320 HCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDEL 399 (507)
Q Consensus 320 ~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~ 399 (507)
+|+.|++..+|+++|++|++|++++.|||+|||+|+.+++|.+|+++||+++++++++++++|||||++|++++++|+++
T Consensus 335 ~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~ 414 (517)
T cd03336 335 TCKLIEEIMIGEDKLIRFSGVAAGEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEEL 414 (517)
T ss_pred ccceEEEEEECCeEEEEEEccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999899999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHH
Q 010585 400 ARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVL 479 (507)
Q Consensus 400 ~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l 479 (507)
++..++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|+|+.+|++.||++.|||||+.+|+++|
T Consensus 415 ~~~~~~~~~~~i~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l 494 (517)
T cd03336 415 AKKTPGKKSLAIEAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYNGNTTAGLDMRKGTVGDMKELGITESFKVKRQVL 494 (517)
T ss_pred hhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCceeeecCCCCccchhhcCceecHHHHHHHH
Confidence 88889999999999999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHhhhcCCC
Q 010585 480 LSATEAAEMILRVDEIITCAPR 501 (507)
Q Consensus 480 ~~A~e~a~~iL~iD~iI~~~~~ 501 (507)
+.|+|+|++|||||++|.++|+
T Consensus 495 ~~A~e~a~~iL~id~ii~~~~~ 516 (517)
T cd03336 495 LSASEAAEMILRVDDIIKCAPR 516 (517)
T ss_pred HHHHHHHHHHHhHhHHhhcCCC
Confidence 9999999999999999999773
No 2
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=7e-108 Score=869.07 Aligned_cols=500 Identities=73% Similarity=1.078 Sum_probs=480.3
Q ss_pred ccHHHHHHHHHHhhhcCCCcccccccccc-----CCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQST-----GRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTS 76 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~-----~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt 76 (507)
.|+.||..++++++|||||+||+|||++. . |+++|||||+|||++|+++||+++|++++|++|++++||||||
T Consensus 26 ~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~--G~~~iTnDG~TIlk~i~~~hP~akll~~~a~~qd~~~GDGTTt 103 (533)
T PTZ00212 26 QSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRS--GNVTVTNDGATILKSVWLDNPAAKILVDISKTQDEEVGDGTTS 103 (533)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEeecCCCcccC--CCEEEeccHHHHHHhccCcCHHHHHHHHHHHhhhhhhCCchhH
Confidence 58999999999999999999999999997 5 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHH
Q 010585 77 VVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQ 156 (507)
Q Consensus 77 ~vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~ 156 (507)
+|+|+++||++|.+|+++|+||..|++||+.|++.+++.|+++++|++.++..+.+.|+++++|+++||+.+.+.+.|++
T Consensus 104 vvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~sk~~~~~~~~l~~ 183 (533)
T PTZ00212 104 VVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLSSKLLTVEKDHFAK 183 (533)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhcccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999998654333457899999999999999999999999
Q ss_pred HHHHHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 157 LAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 157 lv~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
++++|+..+.+.+++++|++++++||+++||++++|+++++++.+.||++++||||++++++||+++++..+.++.+++.
T Consensus 184 i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds~lv~G~v~~~~~~~~~~~~i~n~kIll~~~~Le~~k~~~~~~~~~i~~~ 263 (533)
T PTZ00212 184 LAVDAVLRLKGSGNLDYIQIIKKPGGTLRDSYLEDGFILEKKIGVGQPKRLENCKILVANTPMDTDKIKIYGAKVKVDSM 263 (533)
T ss_pred HHHHHHHHHhccCCccceEEEEecCcCccccEEEEeEEEecccCCCCCccccCCcEEEEeCCCCCCcccccCceEEeCCH
Confidence 99999999977788999999999999999999999999999877789999999999999999999999876678899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++..+++.|+++++++++.|++.++++++++++|+|.+++||.++||++++|+++++++|||++|||+++++++++++.
T Consensus 264 ~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~~I~avr~v~~~~l~rIa~~tGa~iis~l~~~~~~ 343 (533)
T PTZ00212 264 EKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEAGIMAIEHADFDGMERLAAALGAEIVSTFDTPEKV 343 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEeecCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEV 396 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L 396 (507)
++|+|+.|++..+|+++|++|++|+.+++|||+|||+|+.+++|.||+++||+++++++++++++|||||++|++++.+|
T Consensus 344 ~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L 423 (533)
T PTZ00212 344 KLGHCDLIEEIMIGEDKLIRFSGCAKGEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAV 423 (533)
T ss_pred HccCCceEEEEEECCeEEEEEEccCCCCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHH
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHH
Q 010585 397 DELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQ 476 (507)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~ 476 (507)
+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|+|+.+|++.||++.|||||+.+|+
T Consensus 424 ~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~ 503 (533)
T PTZ00212 424 EELAKKVEGKKSLAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYKGNKTAGIDMEKGTVGDMKELGITESYKVKL 503 (533)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeccCCcccchhhccceecHHHHH
Confidence 99988889999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHhhhcCCCCC
Q 010585 477 AVLLSATEAAEMILRVDEIITCAPRRR 503 (507)
Q Consensus 477 ~~l~~A~e~a~~iL~iD~iI~~~~~~~ 503 (507)
++|+.|+|+|++|||||++|..+|+++
T Consensus 504 ~al~~A~e~a~~iL~id~ii~~~~~~~ 530 (533)
T PTZ00212 504 SQLCSATEAAEMILRVDDIIRCAPRQR 530 (533)
T ss_pred HHHHHHHHHHHHHHhhhHhhhcCCccc
Confidence 999999999999999999999976543
No 3
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.6e-106 Score=855.27 Aligned_cols=501 Identities=70% Similarity=1.048 Sum_probs=476.8
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.|+..++++++|||||+||+|||+++...|+++|||||+|||++|++.||+++|++++|++|++++||||||+|+|+
T Consensus 18 ~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~akll~~~a~~qd~~~GDGTTtvvvLa 97 (519)
T TIGR02341 18 SSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPAAKVLVDMSKVQDDEVGDGTTSVTVLA 97 (519)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChHHHHHHHHHHHhHhhhCCchhHHHHHH
Confidence 68999999999999999999999999997211899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||++|.+|+++|+||+.|++||+.|++.+++.|+++++|++.+.+..+++|+++++|+++||+.+.+.+.|++++++|
T Consensus 98 ~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~ski~~~~~~~~s~l~~~a 177 (519)
T TIGR02341 98 AELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSKILSQHKDHFAQLAVDA 177 (519)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999865322225789999999999999999999999999999
Q ss_pred HHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHH
Q 010585 162 VMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAE 241 (507)
Q Consensus 162 ~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~ 241 (507)
+..+.+..+.++|+|++++|+++++|++++|+++++.+.+.||++++||+|++++++|++++++..++++.+++.+++..
T Consensus 178 v~~i~~~~~~~~i~i~k~~G~s~~~s~l~~G~v~~~~~~~~~~~~~~n~~Ili~~~~Le~~~~~~~~~~~~~~~~~~~~~ 257 (519)
T TIGR02341 178 VLRLKGSGNLDAIQIIKKLGGSLNDSYLDEGFLLEKKIGVNQPKRIENAKILIANTPMDTDKVKVFGSRVRVDSTAKVAE 257 (519)
T ss_pred HHHhccCCChhheEEEEccCCCcccceEEeeEEEeccCCCCCceeeccccEEEEecCCCCCccccCCceEEeCCHHHHHH
Confidence 99986656788999999999999999999999999987777899999999999999999998886447788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCcccc
Q 010585 242 IEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHC 321 (507)
Q Consensus 242 l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~~ 321 (507)
++..|++++.++++.|++.++++++++++|+|.+++||.+++|++++++++.+|+|||++|||+++++++++++.++|+|
T Consensus 258 l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~~I~~v~~~~~~~l~~ia~~tGa~ii~~~~~~~~~~lG~~ 337 (519)
T TIGR02341 258 LEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLALVTGGEIVSTFDHPELVKLGSC 337 (519)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCEEecccccCCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhh
Q 010585 322 KLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR 401 (507)
Q Consensus 322 ~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~ 401 (507)
+.|++..+|+++|++|++|+.++.|||+|||+|+.+++|.+|+++||+++++++++++++||||||+|++++.+|+++++
T Consensus 338 ~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~ 417 (519)
T TIGR02341 338 DLIEEIMIGEDKLLKFSGVKLGEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQ 417 (519)
T ss_pred ceEEEEEECCEEEEEEEcCCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHH
Q 010585 402 KTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLS 481 (507)
Q Consensus 402 ~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~ 481 (507)
..++++++++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|+|+.+|++.||++.|||||+.||+++++.
T Consensus 418 ~~~~~~~~~i~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~ 497 (519)
T TIGR02341 418 KVPGKEALAVEAFARALRQLPTIIADNAGFDSAELVAQLRAAHYNGNHTMGLDMEEGEIADMRKLGIIESYKVKRAVVSS 497 (519)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceecCCCcccchhhccceEcHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHhhhcCCCC
Q 010585 482 ATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 482 A~e~a~~iL~iD~iI~~~~~~ 502 (507)
|+|+|++||+||++|.++|+.
T Consensus 498 A~e~a~~iL~id~ii~~~~~~ 518 (519)
T TIGR02341 498 AAEAAEVILRVDNIIKAAPRA 518 (519)
T ss_pred HHHHHHHHHhHHHHHhcCCCC
Confidence 999999999999999998843
No 4
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-108 Score=777.99 Aligned_cols=499 Identities=36% Similarity=0.566 Sum_probs=481.1
Q ss_pred CccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHH
Q 010585 1 MASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL 80 (507)
Q Consensus 1 ~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL 80 (507)
.||++||..+++.++|||||+||||+|++.. |+++|||||+||||-|++-||+++.|++++.+||.++||||||+|+|
T Consensus 23 vSNInaC~~v~e~~rtTLGP~GmDkLivd~~--g~~tIsNDGATIlKlldivhPaaktlVdia~sQDaEVGDGTTSVv~l 100 (543)
T KOG0361|consen 23 VSNINACTAVAEALRTTLGPRGMDKLIVDSK--GKTTISNDGATILKLLDIVHPAAKTLVDIARSQDAEVGDGTTSVVLL 100 (543)
T ss_pred hhchHHHHHHHHHHHhccCccccceeeecCC--CcEEEecCcHHHHHHHhhcChhHHHHHHHHhhccccccCCceeEeee
Confidence 3899999999999999999999999999997 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCC-hhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 81 AGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKEN-AETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 81 ~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~-~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
++++|+++-.+++.|+||..|+++|++|...|++.++++++.++.. ..+.++.|++.|.|+|+||+.+++.++|+++++
T Consensus 101 a~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKlI~~ek~fF~~MvV 180 (543)
T KOG0361|consen 101 AAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKLIRQEKEFFAKMVV 180 (543)
T ss_pred HHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988742 334467899999999999999999999999999
Q ss_pred HHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCC----CCCccccCccEEEeeeccccccccccCeEEEEcC
Q 010585 160 DAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMDTDKVKIYGARVRVDS 235 (507)
Q Consensus 160 ~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~----~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~ 235 (507)
+|+..+....+.+.|-|.|++||+++||.+++|+-|.+.|+| .+|+++.||||+++|..||.+..+. +.++.+.+
T Consensus 181 DAV~~ld~~l~~~mIGIKKV~GG~~~dS~lv~GVAFkKtFsYAGfEqqPKk~~NpkIl~LnvELElKaEkd-NAEiRv~~ 259 (543)
T KOG0361|consen 181 DAVLTLDNDLDLNMIGIKKVPGGAMEDSLLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNVELELKAEKD-NAEIRVDN 259 (543)
T ss_pred HHHHhhccccchhhcceeecCCCccchhhhccceeeeehccccchhhCccccCCceEEEEeeeeeeccccc-CceeecCC
Confidence 999999877888999999999999999999999999999875 4799999999999999999866544 58999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCC
Q 010585 236 MSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPES 315 (507)
Q Consensus 236 ~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~ 315 (507)
+++++.....||+.+++++++|.+.|+|+|++...|.|++.+||++++|+|-.||+.+||.|+..++|+++.++..++.+
T Consensus 260 v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdiFCAGRV~~eDl~Rv~~acGGsi~tt~~~i~~ 339 (543)
T KOG0361|consen 260 VEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDIFCAGRVPEEDLNRVMQACGGSIQTTVSDIKE 339 (543)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCceecCcCCHHHHHHHHHhcCcchhhhhhhcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHH
Q 010585 316 VKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKE 395 (507)
Q Consensus 316 ~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~ 395 (507)
..+|.|..+++.++|++||-+|+||+.++.||++|||+.++.++|.+|++|||++++|.++++..+|+|||++||.+++.
T Consensus 340 ~~LG~C~~FeE~QvG~eRyN~Fegcp~aktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~ 419 (543)
T KOG0361|consen 340 EVLGTCALFEERQVGGERYNLFEGCPKAKTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKY 419 (543)
T ss_pred hhcchhhhHHHHhhcchhhhhhcCCCccceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHH
Q 010585 396 VDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVK 475 (507)
Q Consensus 396 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk 475 (507)
|++++..+.+++|+.+.+|++|||.|||+||+|+|+|..+++++||..|++|..|+|+|.+++.+.|+++.+||||..||
T Consensus 420 lRd~S~ti~gK~q~~i~A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~G~~w~Gvdi~~e~i~dn~~~~VwEP~~VK 499 (543)
T KOG0361|consen 420 LRDYSRTIAGKQQLFINAYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQGEKWYGVDINTEGIADNFEKFVWEPSIVK 499 (543)
T ss_pred HHHhhcccCcHHHHHHHHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhcCCceeeeeecccchhhHHHhhccChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 476 QAVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 476 ~~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
.+++..|+|+||+||.+|+.|.+.+..
T Consensus 500 ~Nai~aateAa~lIlsvDeTikn~~S~ 526 (543)
T KOG0361|consen 500 INAITAATEAACLILSVDETIKNPKSQ 526 (543)
T ss_pred HHHHHHHHHhhhheEehhhhhcCCccc
Confidence 999999999999999999999987643
No 5
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.7e-106 Score=851.26 Aligned_cols=495 Identities=30% Similarity=0.483 Sum_probs=471.4
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|+.++|++|++++||||||+++|+
T Consensus 20 ~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~--G~~~ITnDG~TIlk~i~i~hP~a~ll~~~a~~qd~~~GDGTTtvvvLa 97 (531)
T TIGR02347 20 MNINAARGLQDVLKTNLGPKGTLKMLVSGA--GDIKLTKDGNVLLNEMQIQHPTASMIARAATAQDDITGDGTTSTVILI 97 (531)
T ss_pred HHHHHHHHHHHHHhcCCCCCccceEEEcCC--CCEEEeccHHHHHHhccccChHHHHHHHHHHHhhhhhcCcHHHHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccC-CChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNK-ENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||++|.+|+++|+||..|++||+.|++.+++.|++++++.. ..+ .+.|.++++|+++||+.+.++++|++++++
T Consensus 98 ~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~---~~~l~~ia~tsl~sK~~~~~~~~ls~iv~~ 174 (531)
T TIGR02347 98 GELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVD---RELLLNVARTSLRTKLPIDLADQLTEIVVD 174 (531)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC---HHHHHHHHHHHhccccchhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997753 211 478999999999999999999999999999
Q ss_pred HHHhhccC---CCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 161 AVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 161 a~~~~~~~---~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
|+..++++ +++++|+|++.+|++.++|++++|++|++++. +.||++++||+|++++++|++++++.. ..+.+.++
T Consensus 175 Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds~~v~Giv~~~~~~~~~~~~~~~n~~Ill~~~~le~~~~~~~-~~~~~~~~ 253 (531)
T TIGR02347 175 AVLAIKKDGEQIDLFMVEIMEMKHKSATDTTLIRGLVLDHGARHPDMPRRVKNAYILTCNVSLEYEKTEVN-SGFFYSNA 253 (531)
T ss_pred HHHHHhhcCCCCChhHeEEEEecCCCccccEEEeeEEEecCcCCCCCceeccCceEEEEeCCCCCCccccC-ceEEEcCH
Confidence 99998653 67778999999999999999999999999864 569999999999999999999988775 67899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-------Ce---EEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCee
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHG-------IN---CFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEI 306 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~-------v~---lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~i 306 (507)
+++..+...|++++++++++|++.+ ++ +|+|+++|+|.+++||.++||++++|+++++|+|||++|||++
T Consensus 254 ~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~~I~~i~rv~~~~le~ia~~tGa~~ 333 (531)
T TIGR02347 254 EQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKEGIMALRRAKRRNMERLTLACGGEA 333 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHCCceEEccCCHHHHHHHHHHhCCEE
Confidence 9999999999999999999999865 25 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCC
Q 010585 307 ASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 386 (507)
Q Consensus 307 i~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG 386 (507)
+++++++++.++|+|+.|++..+|+++|++|++|.+++.|||+|||+|+.+++|++|+++||+++++++++++++|||||
T Consensus 334 i~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGG 413 (531)
T TIGR02347 334 LNSVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNPKSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAG 413 (531)
T ss_pred ecccccCCccccccceEEEEEEECCeEEEEEEcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCC
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccC
Q 010585 387 WPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAEL 466 (507)
Q Consensus 387 ~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~ 466 (507)
++|++|+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|+|+.+|++.||++.
T Consensus 414 a~E~~ls~~l~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~~Gid~~~g~~~d~~~~ 493 (531)
T TIGR02347 414 AFEIAAYCHLKEEKKSVKGKAKLGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEVVGVDLETGEPIDPEIK 493 (531)
T ss_pred HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeeeccCCCccchhhc
Confidence 99999999999998888999999999999999999999999999999999999999998777889999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 467 GISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 467 gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
|||||+.+|+++|+.|+|+|++|||||++|.++|..
T Consensus 494 gV~Dp~~vk~~al~~A~e~a~~iLrID~ii~~~~~~ 529 (531)
T TIGR02347 494 GIWDNYRVKKQLIQSATVIASQLLLVDEVMRAGRSM 529 (531)
T ss_pred cCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhCcccc
Confidence 999999999999999999999999999999987764
No 6
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.1e-105 Score=850.62 Aligned_cols=495 Identities=40% Similarity=0.599 Sum_probs=473.5
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|+++++++|++++||||||+|+|+
T Consensus 20 ~ni~a~~~i~~~v~tslGP~G~~kmi~~~~--g~~~iTnDG~tIlk~l~~~hP~akll~~~a~~q~~~~GDGTtt~viL~ 97 (522)
T cd03340 20 SNINACQAIADAVRTTLGPRGMDKLIVDGR--GKVTISNDGATILKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVVLA 97 (522)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCceEEEcCC--CCEEEeccHHHHHHHccccCHHHHHHHHHHHHhHhHhCCChhHHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCCh-hhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENA-ETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||+++.+++++|+||+.|++||+.|++.+++.|+++++|++.++ ...++.|+++++|+++||+.+.++++|++++++
T Consensus 98 ~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~l~~l~~~ 177 (522)
T cd03340 98 GEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIASEKEFFAKMVVD 177 (522)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcchhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999886531 112467999999999999999999999999999
Q ss_pred HHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCC----CCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 161 AVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 161 a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~----~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
|+..++++++.++|+|++++||+++||++++|++|++++.. .||++++||+|++++++||+++++.. .++.++++
T Consensus 178 A~~~v~~~~~~~~I~i~~i~Ggs~~ds~lv~Giv~~k~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~-~~i~i~~~ 256 (522)
T cd03340 178 AVLSLDDDLDLDMIGIKKVPGGSLEDSQLVNGVAFKKTFSYAGFEQQPKKFKNPKILLLNVELELKAEKDN-AEVRVEDP 256 (522)
T ss_pred HHHHhcccCChhHheEeeecCCChhhceeeeeEEEecccCccccccCCccccCCeEEEEeCCCCCCccccc-eEEEECCH
Confidence 99999888999999999999999999999999999998652 36899999999999999999887764 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++..+.+.|+++++++++.|++.|+++|+++++|+|.+++||.++||++++|+++++|+|||++|||+++++++++++.
T Consensus 257 ~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~~I~~~~~v~~~~l~rIa~~tGa~ii~~l~~l~~~ 336 (522)
T cd03340 257 EEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADRDIFCAGRVPEEDLKRVAQATGGSIQTTVSNITDD 336 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHCCcEEEEeCCHHHHHHHHHHHCCEEeeccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEV 396 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L 396 (507)
.+|+|+.+++.++|+++|++|++|+.++.+||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|
T Consensus 337 ~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l 416 (522)
T cd03340 337 VLGTCGLFEERQVGGERYNIFTGCPKAKTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL 416 (522)
T ss_pred ccccceEEEEEEECCEEEEEEECCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCC-CceeEEcCCCcccccccCCcccchHHH
Q 010585 397 DELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG-CPAGIDVISGSVGDMAELGISESFKVK 475 (507)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~-~~~G~d~~~g~~~d~~~~gi~dp~~vk 475 (507)
+++++..++++++++++||+||+.||++|++|||+|+.+++.+|+..|..++ .++|+|+.+|++.||++.|||||+.||
T Consensus 417 ~~~~~~~~~~~~~~~~~fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk 496 (522)
T cd03340 417 RDYSRTIAGKQQLVINAFAKALEIIPRQLCDNAGFDATDILNKLRQKHAQGGGKWYGVDINNEGIADNFEAFVWEPSLVK 496 (522)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCCeeeeeCCCCcccchhhcCceEcHHHH
Confidence 9998888999999999999999999999999999999999999999998776 789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 476 QAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 476 ~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
+++++.|+|+|++|||||++|.++
T Consensus 497 ~~~i~~A~e~a~~iL~id~ii~~~ 520 (522)
T cd03340 497 INALTAATEAACLILSVDETIKNP 520 (522)
T ss_pred HHHHHHHHHHHHHHhhhhhheeCC
Confidence 999999999999999999999875
No 7
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.3e-105 Score=850.79 Aligned_cols=494 Identities=31% Similarity=0.496 Sum_probs=471.4
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|++++|++|++++||||||+|+|+
T Consensus 20 ~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~--g~~~iTnDG~tIl~~l~~~hP~akll~~~a~~q~~~~GDGTtt~viLa 97 (525)
T TIGR02344 20 SNIQAAKAVADIIRTTLGPRAMLKMLLDPM--GGIVMTNDGNAILREIDVAHPAAKSMIELSRTQDEEVGDGTTSVIILA 97 (525)
T ss_pred HHHHHHHHHHHHHhcccCCCCCCceEEcCC--CCEEEEccHHHHHHhccCCCHHHHHHHHHHHhhhhhccCCcchhHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||++|.+|+++|+||+.|++||+.|++.+++.|+++++|++..+ .+.+.++++|+++||+.++|.++|++++++|
T Consensus 98 ~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~i~~t~l~sk~~~~~~~~ls~l~~~A 174 (525)
T TIGR02344 98 GEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVND---DAAMLKLIQSCIGTKFVSRWSDLMCDLALDA 174 (525)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC---HHHHHHHHHHhhccccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986532 3679999999999999999999999999999
Q ss_pred HHhhccC-------CCcc-cceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEE
Q 010585 162 VMRLKGS-------TNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVR 232 (507)
Q Consensus 162 ~~~~~~~-------~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~ 232 (507)
+..++.+ +|++ +|+|.+++||+++||++++|++|++++. ..||++++||+|++++++|++++++.. .++.
T Consensus 175 i~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS~lv~Gvvi~k~~~~~~m~~~~~n~kIlll~~~Le~~~~~~~-~~i~ 253 (525)
T TIGR02344 175 VRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDSCVLKGVMINKDVTHPKMRRYIENPRIVLLDCPLEYKKGESQ-TNVE 253 (525)
T ss_pred HHHhhccccCCCCccChhhceEEEEecCCChHhcCcccceEEecccCCCCCccccCCCCEEEEeccccccccccc-ceEE
Confidence 9998632 2333 4899999999999999999999999864 579999999999999999999988875 7789
Q ss_pred EcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCC
Q 010585 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDN 312 (507)
Q Consensus 233 i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~ 312 (507)
+.+++++.++.+.|++++++++++|.+.++++|++++++++.++++|.++||++++|+++++|+|||++|||++++++++
T Consensus 254 i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~~I~av~~v~~~~LerIa~~tGa~ii~~l~~ 333 (525)
T TIGR02344 254 IMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKANISAIRRVRKTDNNRIARACGATIVNRPEE 333 (525)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCCceEEecCCHHHHHHHHHHhCCeEecchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccc-cceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHH
Q 010585 313 PESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMV 391 (507)
Q Consensus 313 l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~ 391 (507)
++++++|+ |+.+++.++|+++|++|++|+.++.|||+|||+|+.+++|+||+++||+++++++++++++|||||++|++
T Consensus 334 l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ 413 (525)
T TIGR02344 334 LRESDVGTGCGLFEVKKIGDEYFTFFTECKDPKACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMA 413 (525)
T ss_pred CCHhhcCCcCCEEEEEEECCeEEEEEEcCCCCCEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 99999999 99999999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcC-CCceeEEcCCCcccccccCCccc
Q 010585 392 MAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDVISGSVGDMAELGISE 470 (507)
Q Consensus 392 la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~-~~~~G~d~~~g~~~d~~~~gi~d 470 (507)
||.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+ +.++|+|+.+|++.||++.||||
T Consensus 414 ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~d 493 (525)
T TIGR02344 414 VSVYLAKKASKLEGVQQWPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGIDGETGKIVDMKEKGIWE 493 (525)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEECCCCccccchhcccee
Confidence 99999999888899999999999999999999999999999999999999999876 67899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhHhhhcCCC
Q 010585 471 SFKVKQAVLLSATEAAEMILRVDEIITCAPR 501 (507)
Q Consensus 471 p~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~ 501 (507)
|+.+|+++++.|+|+|++|||||++|.+.|+
T Consensus 494 p~~vk~~~l~~A~e~a~~iL~id~ii~~~~~ 524 (525)
T TIGR02344 494 PLAVKLQTYKTAIESACMLLRIDDIVSGVKK 524 (525)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhHHhhcCCC
Confidence 9999999999999999999999999988763
No 8
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=2.6e-105 Score=849.35 Aligned_cols=491 Identities=42% Similarity=0.639 Sum_probs=471.3
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|+++++++|++++||||||+++|+
T Consensus 20 ~ni~~~~~i~~~v~tslGP~G~~k~i~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~qd~~~GDGTtt~viL~ 97 (519)
T TIGR02339 20 NNIAAAKAVAEAVKSTLGPRGMDKMLVDSL--GDVTITNDGATILKEMDIEHPAAKMLVEVAKTQDAEVGDGTTTAVVLA 97 (519)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeeeECCC--CCEEEEccHHHHHHhccCCCHHHHHHHHHHHHHHHHhCCCcccHHHHH
Confidence 689999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhccccc-ccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL-SQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~-~~~~~~l~~lv~~ 160 (507)
++||+++.+++++|+||..|++||+.|++.+++.|+++++|++..+ ++.|+++|+|+++||+. +.+.++|++++++
T Consensus 98 ~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~---~~~L~~ia~tsl~sk~~~~~~~~~ls~l~~~ 174 (519)
T TIGR02339 98 GELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPED---RDLLKKVAETSLTGKASAEVTKDKLANLVVE 174 (519)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCccc---HHHHHHHHHhhhccccccchhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986532 46799999999999998 7899999999999
Q ss_pred HHHhhcc-------CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEE
Q 010585 161 AVMRLKG-------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVR 232 (507)
Q Consensus 161 a~~~~~~-------~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~ 232 (507)
|+.++++ .+|+++|+|++++||++++|++++|++|++++. ++||++++||||++++++||+++++.. .++.
T Consensus 175 A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds~lv~G~vi~~~~~~~~m~~~i~n~kIlll~~~Le~~~~~~~-~~~~ 253 (519)
T TIGR02339 175 AVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDTELVEGIVVDKEPVHPGMPKRVKNAKIALLDAPLEVEKTEID-AKIR 253 (519)
T ss_pred HHHHHhhhccCCCcccCHHHeEEEEccCcChhcceeEeeEEEecCCCCCCCccccCCCcEEEEeccccccccccc-eEEE
Confidence 9998863 367889999999999999999999999999974 679999999999999999999999875 6788
Q ss_pred EcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCC
Q 010585 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDN 312 (507)
Q Consensus 233 i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~ 312 (507)
+++.+++.++.+.|+++++++++.|.+.++++|+++++|++.+++||.++||++++++++++|+|||++|||++++++++
T Consensus 254 i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~gI~~v~~v~~~~L~rIa~~tGa~ii~~~~~ 333 (519)
T TIGR02339 254 ITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKAGILAVRRVKKSDIEKLARATGAKIVSSIKE 333 (519)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEeCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHH
Q 010585 313 PESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 392 (507)
Q Consensus 313 l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~l 392 (507)
+++..+|+|++|++.++|+++|++|++|..+..+||+|||||+.+++|.+|+++||+++++++++++++|||||++|++|
T Consensus 334 l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~l 413 (519)
T TIGR02339 334 ITESDLGYAGLVEERKVGDDKMTFVEGCKNPKAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIEL 413 (519)
T ss_pred CChhhccCCceEEEEEECCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccch
Q 010585 393 AKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESF 472 (507)
Q Consensus 393 a~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~ 472 (507)
+.+|++++...++++++++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|+|+.+|++.||++.|||||+
T Consensus 414 s~~l~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~ 493 (519)
T TIGR02339 414 ALRLRSYARKIGGREQLAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEKGNKNAGINVFTGEIEDMLELGVIEPL 493 (519)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeEEcCCCCccchhhccceEcH
Confidence 99999998888999999999999999999999999999999999999999998777789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 473 KVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 473 ~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
.+|+++++.|+|+|++|||||++|.+
T Consensus 494 ~vk~~~l~~A~e~a~~iL~id~ii~~ 519 (519)
T TIGR02339 494 RVKEQAIKSATEAATMILRIDDVIAA 519 (519)
T ss_pred HHHHHHHHHHHHHHHHHHhHhHHhhC
Confidence 99999999999999999999999863
No 9
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.8e-105 Score=847.02 Aligned_cols=492 Identities=37% Similarity=0.574 Sum_probs=471.4
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|++++|++|++++||||||+++|+
T Consensus 13 ~ni~a~~~ia~~~kttlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hP~akll~~~a~~qd~~~GDGTtt~viLa 90 (517)
T TIGR02342 13 SNIVAAKAVADAIRTSLGPRGMDKMIQSGN--GEVIITNDGATILKQMGVIHPAAKMLVELSKAQDIEAGDGTTSVVILA 90 (517)
T ss_pred HHHHHHHHHHHHHhCCcCCCCCcEEEEcCC--CCEEEeCCHHHHHHhccccChHHHHHHHHHHHHHHHhCCCcchHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+|+++|+||+.|++||+.|++.+++.|+++++|++.++ .+.|.++++|+++||+.+.+.++|++++++|
T Consensus 91 ~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~va~tsl~sK~~~~~~~~ls~l~~~a 167 (517)
T TIGR02342 91 GALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSD---REILIKSATTSLSSKVVSQYSSLLAPLAVDA 167 (517)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccC---HHHHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986422 4689999999999999999999999999999
Q ss_pred HHhhcc-----CCCcccceeeecCCCCCCCceeeeeEEEeecCCC--CCCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 162 VMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI--GQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 162 ~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~--~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
+..+++ .+++++|+|+++.||+.++|++++|++|++++.+ +||++++||||++++++|++++++.. .++.+.
T Consensus 168 ~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds~li~Givl~k~~~~~~~mpk~i~n~kI~ll~~~Le~~~~~~~-~~~~~~ 246 (517)
T TIGR02342 168 VLKVIDPENDKNVDLNDIKVVKKLGGTIDDTELIEGLVFTQKASRSAGGPTRIEKAKIGLIQFQISPPKTDME-NQVIVN 246 (517)
T ss_pred HHHHhccccCCccCHHHeeEEeccCCChhhcEEEeeEEEeccccccCCCCccccCCcEEEEecCCCCCccccc-ceEEeC
Confidence 999854 4788899999999999999999999999999764 78999999999999999999888765 678889
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCC-----CchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccc
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHADFDGIERLALVTGGEIAST 309 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i-----~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~ 309 (507)
+++++..+.+.|+++++.++++|.+.|+++|+++++| ++.+++||.++||++++++++++|+|||++|||+++++
T Consensus 247 ~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~~~I~av~~v~~~~LerIa~~tGa~ii~~ 326 (517)
T TIGR02342 247 DYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAKMKIMVVKDIEREEVEFICKTIGCKPIAS 326 (517)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhhCCceEEecCCHHHHHHHHHHHCCEEEcc
Confidence 9999999999999999999999999999999999998 89999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccceEEEEEEcCeEEEEEEccCC-CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCch
Q 010585 310 FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWP 388 (507)
Q Consensus 310 l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~-~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~ 388 (507)
++++++.++|+|+.|+++++++++|+++.+|++ ++.+||+|||||+.+++|.+|+++||+++++++++++++|||||++
T Consensus 327 ~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~ 406 (517)
T TIGR02342 327 IDHFTADKLGSAELVEEVTTDGGKIIKITGIQNAGKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAP 406 (517)
T ss_pred hhhcCcccCcCCceEEEEEECCeEEEEEEccCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHH
Confidence 999999999999999999999999999999987 4899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCc
Q 010585 389 EMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGI 468 (507)
Q Consensus 389 E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi 468 (507)
|++++.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++++|+..|..++.++|+|+.+|+++||++.||
T Consensus 407 e~~ls~~l~~~~~~~~~~~~~~i~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI 486 (517)
T TIGR02342 407 EIEIAIKLSKLARTMKGVESYCVRAFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYAGISVRKGGITDMLEEEV 486 (517)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCccceecCCCCccchhhccc
Confidence 99999999999888899999999999999999999999999999999999999999888889999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 469 SESFKVKQAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 469 ~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
|||+.+|+++++.|+|+|++|||||++|.++
T Consensus 487 ~dp~~vk~~ai~~A~e~a~~iL~iD~ii~~~ 517 (517)
T TIGR02342 487 LQPLLVTTSAVTLASETVRMILKIDDIVFTR 517 (517)
T ss_pred eEcHHHHHHHHHHHHHHHHHHhcccceeecC
Confidence 9999999999999999999999999999764
No 10
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.9e-105 Score=847.24 Aligned_cols=493 Identities=39% Similarity=0.592 Sum_probs=467.7
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|++||..+++++++||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++|++++||||||+|+|+
T Consensus 12 ~ni~a~~~l~~~v~tslGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hP~akll~~~a~~q~~~~GDGTTt~vvLa 89 (527)
T cd03335 12 QNVTAAMAIANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILKLLEVEHPAAKILVELAQLQDKEVGDGTTSVVIIA 89 (527)
T ss_pred HHHHHHHHHHHHHhcCcCCCcCceEEEcCC--CCEEEeCcHHHHHHhccccChHHHHHHHHHHHHHHHhCCCcchHHHHH
Confidence 599999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~-~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||+++.+|+++|+||+.|++||+.|++.+++.|++ +++|++..+ ++.|+++++|+++||+.+.+.++|++++++
T Consensus 90 ~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~---~~~l~~ia~tsl~sK~~~~~~~~ls~l~~~ 166 (527)
T cd03335 90 AELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLG---KESLINVAKTSMSSKIIGADSDFFANMVVD 166 (527)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccC---HHHHHHHHHHHhcccccchhHHHHHHHHHH
Confidence 9999999999999999999999999999999999996 898886321 467999999999999998888999999999
Q ss_pred HHHhhc---c----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEE
Q 010585 161 AVMRLK---G----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVR 232 (507)
Q Consensus 161 a~~~~~---~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~ 232 (507)
|+..++ . .+++++|+|++++||++++|++++|++|++++. ..||+.++||||++++++|++++++.. .++.
T Consensus 167 A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s~li~Givi~~~~~~~~m~~~i~n~kIlll~~~Le~~~~~~~-~~~~ 245 (527)
T cd03335 167 AILAVKTTNEKGKTKYPIKAVNILKAHGKSAKESYLVNGYALNCTRASQGMPTRVKNAKIACLDFNLQKTKMKLG-VQVV 245 (527)
T ss_pred HHHHhhcccccCCCccCHHHeEEEEecCcChhhcceeeeEEEecccCCCCCcccccCCcEEEEeccCCCCccccc-eeEE
Confidence 999884 1 267889999999999999999999999999865 579999999999999999999888764 7789
Q ss_pred EcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCC
Q 010585 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDN 312 (507)
Q Consensus 233 i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~ 312 (507)
+++.+++..+.+.|+++++++++.|.+.|+++|+++++|+|.+++||.++||++++|+++++|+|||++|||++++++++
T Consensus 246 ~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~~I~~v~~v~~~~lerIa~~tGa~ii~~~~~ 325 (527)
T cd03335 246 VTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEAGAMAVRRVKKEDLRRIAKATGATLVSTLAN 325 (527)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCCcEEEEeCCHHHHHHHHHHhCCEEecChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred C------CCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCC
Q 010585 313 P------ESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 386 (507)
Q Consensus 313 l------~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG 386 (507)
+ ++.++|+|+.+++.++++++|++|++|.++++|||+|||+|+.+++|++|+++||+++++++++++++|||||
T Consensus 326 l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~~~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGG 405 (527)
T cd03335 326 LEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKKRSSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGG 405 (527)
T ss_pred cCcccccCHhhCccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCC
Confidence 5 3347999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcC--------CCceeEEcCCC
Q 010585 387 WPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE--------GCPAGIDVISG 458 (507)
Q Consensus 387 ~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~--------~~~~G~d~~~g 458 (507)
++|++|+.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|.++ ++++|+|+.+|
T Consensus 406 a~e~~ls~~L~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~~~Gid~~~g 485 (527)
T cd03335 406 AVETALSIYLENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLING 485 (527)
T ss_pred HHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCceEeEECCCC
Confidence 9999999999999888899999999999999999999999999999999999999999776 45799999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCC
Q 010585 459 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 500 (507)
Q Consensus 459 ~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~ 500 (507)
++.||++.|||||+.+|.++|+.|+|+|+||||||++|.+.|
T Consensus 486 ~~~d~~~~gV~dp~~~k~~~i~~A~e~a~~iLrID~ii~~~~ 527 (527)
T cd03335 486 KVRDNLEAGVLEPTVSKIKSLKFATEAAITILRIDDLIKLNP 527 (527)
T ss_pred cccchhhccceecHHHHHHHHHHHHHHHHHHHhhcceeecCC
Confidence 999999999999999999999999999999999999998865
No 11
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.6e-104 Score=841.57 Aligned_cols=491 Identities=43% Similarity=0.663 Sum_probs=471.6
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
.|+.||..+++++++||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++|++++||||||+++|+
T Consensus 19 ~n~~~~~~i~~~v~tslGP~G~~k~i~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~q~~~~GDGTtt~viLa 96 (517)
T cd03343 19 MNIAAAKAVAEAVRTTLGPKGMDKMLVDSL--GDVTITNDGATILKEMDIEHPAAKMLVEVAKTQDEEVGDGTTTAVVLA 96 (517)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCceeEcCC--CCEEEEccHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCChhHHHHHH
Confidence 589999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++|++++.+++++|+||..|++||+.|++.+++.|+++++|++.++ .+.+.++++|+++||+.+.+.++|++++++|
T Consensus 97 ~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~---~~~l~~va~ts~~sk~~~~~~~~l~~l~~~A 173 (517)
T cd03343 97 GELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDD---KDTLRKIAKTSLTGKGAEAAKDKLADLVVDA 173 (517)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCC---HHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986422 4789999999999999999999999999999
Q ss_pred HHhhcc------CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 162 VMRLKG------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 162 ~~~~~~------~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
+..+++ .+|+++|+|.+++|+++++|++++|++|++++. +.||+.++||||++++++||+++++.. +++.++
T Consensus 174 ~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds~lv~G~v~~~~~~~~~m~~~~~n~~Illl~~~Le~~k~~~~-~~~~i~ 252 (517)
T cd03343 174 VLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDTELIRGIVIDKEVVHPGMPKRVENAKIALLDAPLEVKKTEID-AKIRIT 252 (517)
T ss_pred HHHhhhccCCCccccHHHeeEEeecCcCHHHcceeeeEEEeccCCCCCCccccCCCcEEEEeccccCCccccc-eeEEeC
Confidence 998853 357789999999999999999999999999974 568999999999999999999998875 778899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCC
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~ 314 (507)
+.+++.++.+.|+++++++++.|.+.++++|+++++|++.+++||.++||++++++++++|+|||++|||++++++++++
T Consensus 253 s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~gI~~v~~v~~~~l~~Ia~~tGa~ii~~~~~l~ 332 (517)
T cd03343 253 SPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKAGILAVRRVKKSDMEKLARATGAKIVTNIDDLT 332 (517)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCCcEEEEeCCHHHHHHHHHHhCCEEecchhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 315 SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 315 ~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
+..+|+|+.|++.++|+++|++|++|.+++.+||+|||||+.+++|++|+++||++++|++++++++|||||++|++++.
T Consensus 333 ~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~ 412 (517)
T cd03343 333 PEDLGEAELVEERKVGDDKMVFVEGCKNPKAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAK 412 (517)
T ss_pred hhhCCccceEEEEEECCeEEEEEEcCCCCceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHH
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKV 474 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~v 474 (507)
+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+++..|..++.++|+|+.+|++.||++.|||||+.+
T Consensus 413 ~L~~~~~~~~~~~~~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~v 492 (517)
T cd03343 413 RLREYARSVGGREQLAVEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEKGNKNAGLDVYTGEVVDMLEKGVIEPLRV 492 (517)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeecCCCCccchhhcCceecHHH
Confidence 99999888899999999999999999999999999999999999999989767788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 475 KQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 475 k~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
|+++++.|+|+|++|||||++|.+
T Consensus 493 k~~~l~~A~e~a~~iL~id~ii~~ 516 (517)
T cd03343 493 KKQAIKSATEAATMILRIDDVIAA 516 (517)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhhC
Confidence 999999999999999999999975
No 12
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.9e-104 Score=839.34 Aligned_cols=493 Identities=36% Similarity=0.578 Sum_probs=469.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++|++++||||||+++|+
T Consensus 31 ~ni~a~~~i~~~vkttlGP~G~~KmI~~~~--G~~~ITnDG~tIlk~l~~~hP~akll~~~a~~qd~~~GDGTttvvvLa 108 (532)
T TIGR02343 31 SNIAAAKSVASILRTSLGPKGMDKMLQSPD--GDITVTNDGATILSQMDVDNPIAKLMVELSKSQDDEIGDGTTGVVVLA 108 (532)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcCC--CCEEEeCcHHHHHHHccCCCHHHHHHHHHHHHHHHHhcCCcccHHHHH
Confidence 589999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+|+++|+||+.|++||+.|++.++++|+++++|+..+.+ .++.|.++++|++++|+.+.+.+.|++++++|
T Consensus 109 ~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~-~~~~l~~ia~t~l~sK~~~~~~~~ls~i~~~a 187 (532)
T TIGR02343 109 GALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNN-NKEPLIQAAKTSLGSKIVSKCHRRFAEIAVDA 187 (532)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCC-CHHHHHHHHHHhhccchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998754211 14679999999999999888899999999999
Q ss_pred HHhhc----cCCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 162 VMRLK----GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 162 ~~~~~----~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+..+. .++|+++|+|++++||+++||++++|++|++++. +.||+.++||||++++++|++++++.. .++.++++
T Consensus 188 v~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds~~v~Gi~i~~~~~~~~m~~~~~n~kI~l~~~~le~~~~~~~-~~~~i~~~ 266 (532)
T TIGR02343 188 VLMVADMERRDVDFDLIKVEGKVGGSLEDTKLIKGIIIDKDFSHPQMPKEVKDAKIAILTCPFEPPKPKTK-HKLDISSV 266 (532)
T ss_pred HHhhhhcCCCcCCHHHeeEEEecCCCcccceeEeeEEEecCcCCCCCCeeecCCcEEEEEeeccccccccc-eeEEeCCH
Confidence 99874 2578899999999999999999999999999865 568999999999999999999998764 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++..+.+.|+++++.+++.|.+.|+++|+++++|+|.+++||.++||.+++|+++++|+|||++|||+++++++++++.
T Consensus 267 ~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~~~~i~~v~~~~~~~l~~Ia~~tGa~~i~~l~~~~~~ 346 (532)
T TIGR02343 267 EEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLLQNDLPAVRWVGGHELELIAIATGGRIVPRFEELSED 346 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHHCCcEEEEcCCHHHHHHHHHHhCCEEecccccCCHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcC--eEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 317 KLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
.+|+|+.|++..+|+ ++|++|++|++++.+||+|||+|+.+++|.+|+++||+++++++++++++|||||++|++|++
T Consensus 347 ~LG~a~~v~~~~ig~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~~ls~ 426 (532)
T TIGR02343 347 KLGKAGLVREISFGTTKDRMLVIEQCKNSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEISCSL 426 (532)
T ss_pred HCcccceEEEEEecCCcceEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHH
Confidence 999999999999987 489999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcC-CCceeEEcCCCcccccccCCcccchH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDVISGSVGDMAELGISESFK 473 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~-~~~~G~d~~~g~~~d~~~~gi~dp~~ 473 (507)
+|++++...++++|+++++|++||+.||++|++|||+|+.+++++++..|..+ +.++|+|+.+|++.||++.|||||+.
T Consensus 427 ~l~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~Dp~~ 506 (532)
T TIGR02343 427 AVSQEADKYSGVEQYAIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKEQGVFETLI 506 (532)
T ss_pred HHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchhccCeecHH
Confidence 99999888899999999999999999999999999999999999999988754 66899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 474 VKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
+|+++|+.|+|+|++|||||++|.+
T Consensus 507 vk~~al~~A~e~a~~iL~id~ii~~ 531 (532)
T TIGR02343 507 GKKQQIQLATQLVRMILKIDDVISP 531 (532)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhccC
Confidence 9999999999999999999999965
No 13
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-105 Score=753.61 Aligned_cols=505 Identities=75% Similarity=1.089 Sum_probs=493.8
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+.|.++..+.++|+|||||+||+||+....+.|.+.+||||+|||+++.+.+|+||+|++.+.-||.++||||||+++|+
T Consensus 22 ssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpaAkvLv~~S~vQD~EvGDGTTSV~vla 101 (527)
T KOG0363|consen 22 SSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPAAKVLVDISKVQDDEVGDGTTSVTVLA 101 (527)
T ss_pred HHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCchhhheeccccccccccCCCceehHHHH
Confidence 57889999999999999999999999987656889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||++|.+|+.+.+||..|++||+.|.+.|++.|.+.++....+.+.|+++|+++++|.|+||+.++..++|++++++|
T Consensus 102 aeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiLsq~kehFaelavdA 181 (527)
T KOG0363|consen 102 AELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKILSQDKEHFAELAVDA 181 (527)
T ss_pred HHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887788899999999999999999999999999999999
Q ss_pred HHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHH
Q 010585 162 VMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAE 241 (507)
Q Consensus 162 ~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~ 241 (507)
+.++.+..+++.|+|+|..||+++||++.+||++++.+..++|+.++|+||++.|.+++.++.+.+|+.+.+++...+..
T Consensus 182 V~rLkGs~nL~~IqIIK~~Gg~l~dSfLDeGFlL~K~igv~qpkriena~iLIANT~mDtDKvKvfGarvrVds~~klae 261 (527)
T KOG0363|consen 182 VLRLKGSTNLEAIQIIKKLGGKLEDSFLDEGFLLDKKIGVNQPKRIENAKILIANTPMDTDKVKVFGARVRVDSTAKLAE 261 (527)
T ss_pred HHHhcCCCCccceeeehhcCCccccccccccceeccccCCCCcccccccceEEecCCCcccceeeecceEeecchhHHHH
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCcccc
Q 010585 242 IEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHC 321 (507)
Q Consensus 242 l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~~ 321 (507)
++..|++.++.++++|.+.++|+.++++-|.++..++|++.||+++...+++-+||++..||+.|++++++++...+|+|
T Consensus 262 lE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~dagi~aIEHADFdGiERLalvtGGeI~STFd~p~~~klG~C 341 (527)
T KOG0363|consen 262 LEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADAGIMAIEHADFDGIERLALVTGGEIVSTFDNPELVKLGEC 341 (527)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhcCcceeecccchhHHHHhhcccceeeeccCCcchhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhh
Q 010585 322 KLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR 401 (507)
Q Consensus 322 ~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~ 401 (507)
+.+++..+|++++++|+||+.+..|||+|||.|+++++|.+|++|||||++...+++++++.||||.||..|..+.+++.
T Consensus 342 ~~IeeimiGed~li~FSGv~~GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~ 421 (527)
T KOG0363|consen 342 DLIEEIMIGEDKLIKFSGVKLGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQ 421 (527)
T ss_pred hhhHHHhcCccceeeecccccccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHH
Q 010585 402 KTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLS 481 (507)
Q Consensus 402 ~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~ 481 (507)
..++++..++++|++||..+|.+|+.|+|+|+.+++++||+.|.+|...+|+|+.+|++.||.+.||+|++.+|...+..
T Consensus 422 ~~pGkea~AieAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~~vv~s 501 (527)
T KOG0363|consen 422 ETPGKEALAIEAFARALRQLPTIIADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEIGDMRELGIVESLKVKQAVVSS 501 (527)
T ss_pred hCCchhhHHHHHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhcCCcccccccccCchhhHHHhhhHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHhhhcCCCCCcCC
Q 010585 482 ATEAAEMILRVDEIITCAPRRREDR 506 (507)
Q Consensus 482 A~e~a~~iL~iD~iI~~~~~~~~~~ 506 (507)
|.|++.||||+|.||.+.|+++.++
T Consensus 502 asEaae~ilrvD~Iik~aPR~r~~~ 526 (527)
T KOG0363|consen 502 ASEAAEMILRVDNIIKAAPRERERD 526 (527)
T ss_pred hHHHHHHHHhhhhhhhcCCcccccC
Confidence 9999999999999999999987764
No 14
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.6e-104 Score=837.53 Aligned_cols=494 Identities=39% Similarity=0.582 Sum_probs=470.6
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..+++++++||||+||+|||++.. | ++|||||+|||++|+++||+++|++++|++|++++||||||+|+|+
T Consensus 22 ~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~--g-~~iTnDG~TIlk~i~~~hP~a~ll~~~a~~q~~~~GDGTTt~vvLa 98 (522)
T TIGR02345 22 SNINACVAIAEILKTTLGPRGMDKLIVGKN--G-ATVSNDGATILKLLDIVHPAAKTLVDIAKSQDSEVGDGTTSVVILA 98 (522)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEECCC--C-cEEeCcHHHHHHHhcccChHHHHHHHHHHHHHHHhCCCchhHHHHH
Confidence 699999999999999999999999999986 8 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||++|.+++++|+||..|++||+.|++.+++.|+++++|++..+....+.+.++++|+++||+.+.++++|++++++|
T Consensus 99 ~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~l~~l~~~A 178 (522)
T TIGR02345 99 GELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIAHEKEFFSKMIVDA 178 (522)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999864211124689999999999999999999999999999
Q ss_pred HHhhcc-CCCcccceeeecCCCCCCCceeeeeEEEeecCC----CCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 162 VMRLKG-STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG----IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 162 ~~~~~~-~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~----~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+..+++ .+|+++|+|++++||+++||++++|++|++++. ..||++++||+|++++++|++.+.+.. ..+.+.++
T Consensus 179 ~~~v~~~~~~~~~I~i~ki~Ggs~~ds~~v~Giv~~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~-~~i~~~~~ 257 (522)
T TIGR02345 179 VLQLDIDDLDLKLIGVKKVQGGSLQDSVLVNGVAFKKTFSYAGFEQQPKKFANPKILLLNVELELKAEKDN-AEIRVEDV 257 (522)
T ss_pred HHHHhhccCChhHheEEeecCCCHHhcceecceEEecccCccccccCCceeccceEEEEecCcccCccccc-eEEEECCH
Confidence 999975 578899999999999999999999999999864 246899999999999999999877764 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++..+.+.|+++++++++.|++.|+++|+++++++|.+++||.++||+++++++.+++++++++|||+++++++++++.
T Consensus 258 ~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~~I~~~~~v~~~dl~ria~~tga~ii~~~~~l~~~ 337 (522)
T TIGR02345 258 EDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADHNIFCAGRVSDEDLKRVVKACGGSIQSTTSDLEAD 337 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCeEEcchhhCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEV 396 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L 396 (507)
.+|+|+.+++..+++++|++|+||+++++|||+|||+|+.+++|.+|+++||+++++++++++++|||||++|++++.+|
T Consensus 338 ~LG~~~~ie~~~~~~~r~~~~~g~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l 417 (522)
T TIGR02345 338 VLGTCALFEERQIGSERYNYFTGCPHAKTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKIL 417 (522)
T ss_pred hccCCceEEEEEECCeEEEEEEcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHH
Q 010585 397 DELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQ 476 (507)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~ 476 (507)
++++...++++++++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|||+.+|++.||++.|||||+.||+
T Consensus 418 ~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~ 497 (522)
T TIGR02345 418 REHSKKIDGKQQLIIEAFAKALEIIPRSLCENAGFDSIEILNKLRSRHAKGGKWYGVDINTEDIGDNFENFVWEPLLVKK 497 (522)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceeCCCCcccchhhcCceEcHHHHH
Confidence 99988889999999999999999999999999999999999999999987777899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHhhhcC
Q 010585 477 AVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 477 ~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
++|+.|+|+|++||+||++|.++
T Consensus 498 ~~l~~A~e~a~~iL~id~ii~~~ 520 (522)
T TIGR02345 498 NALKAAFEAACTILSIDETIMNP 520 (522)
T ss_pred HHHHHHHHHHHHHHhHHHHHhCC
Confidence 99999999999999999999874
No 15
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=6.3e-104 Score=839.18 Aligned_cols=492 Identities=37% Similarity=0.589 Sum_probs=467.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++|++++||||||+++|+
T Consensus 27 ~ni~~~~~i~~~v~tslGP~G~~kmi~~~~--G~~~iTnDG~tIlk~l~~~hP~akll~~~a~~q~~~~GDGTtt~viLa 104 (526)
T cd03339 27 SHILAAKSVANILRTSLGPRGMDKILVSPD--GEVTVTNDGATILEKMDVDHQIAKLLVELSKSQDDEIGDGTTGVVVLA 104 (526)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEECCC--CCEEEeCcHHHHHHHhcccCHHHHHHHHHHHhhhhhhcCChhhHHHHH
Confidence 589999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+|+++|+||..|++||+.|++.+++.|+++++|++.+. ...+.|.++++|+++||+.+.+.++|++++++|
T Consensus 105 ~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~-~~~~~l~~ia~tsl~sk~~~~~~~~~s~i~v~a 183 (526)
T cd03339 105 GALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSP-DNKEPLIQTAMTSLGSKIVSRCHRQFAEIAVDA 183 (526)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCc-ccHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999886421 114679999999999999988999999999999
Q ss_pred HHhhcc----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 162 VMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 162 ~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+..+.. ++|++.|+|.+++||+++||++++|++|++++. +.||+..+||||++++++||+++++.. .++.++++
T Consensus 184 v~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS~~v~Givi~~~~~~~~m~~~~~n~kI~ll~~~le~~~~~~~-~~~~i~s~ 262 (526)
T cd03339 184 VLSVADLERKDVNFELIKVEGKVGGRLEDTKLVKGIVIDKDFSHPQMPKEVKDAKIAILTCPFEPPKPKTK-HKLDITSV 262 (526)
T ss_pred HHHHhhcCCCccchHHeEEEEecCcCHHHcceeeeEEEecccCCCCCCceecCCCEEEEEecccCCccccc-eEEEeCCH
Confidence 998742 467789999999999999999999999999875 578999999999999999999998654 67789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++..+.+.|+++++.++++|.+.++++|+++++|+|.+++||.++||++++++++++|+|||++|||+++++++++++.
T Consensus 263 ~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~~~~LerIa~~tGa~ii~~l~~l~~~ 342 (526)
T cd03339 263 EDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQNGLPAVRWVGGVEIELIAIATGGRIVPRFEDLSPE 342 (526)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHCCCEEEEeCCHHHHHHHHHHhCCEEecchhhCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcC--eEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 317 KLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
.+|+|+.|++..+|. ++|++|++|++++.+||+|||+|+.+++|++|+++||+++++++++++++|||||++|++++.
T Consensus 343 ~LG~~~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~ 422 (526)
T cd03339 343 KLGKAGLVREISFGTTKDKMLVIEGCPNSKAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEISCSL 422 (526)
T ss_pred hcccCceEEEEEecCCCcEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHH
Confidence 999999999999985 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcC-CCceeEEcCCCcccccccCCcccchH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDVISGSVGDMAELGISESFK 473 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~-~~~~G~d~~~g~~~d~~~~gi~dp~~ 473 (507)
+|++++...++++|+++++|++||+.||++|++|||+|+.+++++|+..|..+ +.++|+|+.+|++.||++.|||||+.
T Consensus 423 ~l~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~ 502 (526)
T cd03339 423 AVEKAADKCSGIEQYAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQKVFETLI 502 (526)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcCceecHH
Confidence 99999888899999999999999999999999999999999999999999643 56899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 474 VKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
+|+++++.|+|+|++|||||++|.
T Consensus 503 vk~~~l~~A~e~a~~iL~iD~ii~ 526 (526)
T cd03339 503 SKKQQILLATQVVKMILKIDDVIV 526 (526)
T ss_pred HHHHHHHHHHHHHHHHhhhceecC
Confidence 999999999999999999999873
No 16
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.5e-103 Score=831.84 Aligned_cols=497 Identities=31% Similarity=0.487 Sum_probs=470.3
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..+++++++||||+||+|||++.. |+++|||||+||+++|+++||+++|++++|++|++++||||||+|+|+
T Consensus 22 ~ni~a~~~l~~~vkttlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hP~akll~e~a~sqd~~~GDGTTt~vvLa 99 (531)
T TIGR02346 22 KNIEACKELSNITRTSLGPNGMNKMVINHL--DKLFVTNDAATILRELEVQHPAAKLLVMASEMQENEIGDGTNLVIVLA 99 (531)
T ss_pred HHHHHHHHHHHHHhcccCCCcCCeEEEcCC--CCEEEECcHHHHHHhccccCHHHHHHHHHHHHHhhhhCCChhhHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhccc-ccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV-DNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~-~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||+++.+++++|+||..|++||+.|++.+++.|+++++ ++.... ..+.+.++++|+++||+.+. +++|++++++
T Consensus 100 ~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~--~~~~l~~i~~tsl~sK~~~~-~~~ls~l~~~ 176 (531)
T TIGR02346 100 GELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVR--NKKELIKALKASISSKQYGN-EDFLAQLVAK 176 (531)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CHHHHHHHHHHHhccccCch-HHHHHHHHHH
Confidence 9999999999999999999999999999999999999986 664311 14679999999999999877 9999999999
Q ss_pred HHHhhcc----CCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 161 AVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 161 a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
|+..+++ .+++++|+|+++.|+++++|++++|++|++++ ..+|+.++||||+++++|++.++++.. .++.++++
T Consensus 177 Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds~li~Gi~~~~~~-~~~~k~i~n~kI~l~~~~l~~~~~~~~-~~~~~~~~ 254 (531)
T TIGR02346 177 ACSTVMPKNPENFNVDNIRVSKIMGGSISNSEVLKGMVFNREA-EGSVKRVKNAKVAVFSCPLDTATTETK-GTVLIHNA 254 (531)
T ss_pred HHHHHhhcCCCcCChhHeeEEEecCCChhhceeEeeeEEeccC-CCCceeccCCCEEEEecCcCCCcccCc-eEEEECCH
Confidence 9999864 46788999999999999999999999999985 467999999999999999999988764 67899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++..+...|+++++.+++.+++.++++|+++++|+|.+++||.++||+++++++..+|+|||.+|||+++++++++++.
T Consensus 255 ~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~~I~av~~~~~~~l~~Ia~~tGa~ii~~l~~~~~~ 334 (531)
T TIGR02346 255 EELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKYNIMVLKIPSKFELRRLCKTVGATPLARLGAPQPE 334 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHCCcEEEecCCHHHHHHHHHHHCCEEecccccCCHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccC-CCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVE-MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKE 395 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~-~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~ 395 (507)
++|+|+.|++..+|+++|.+|+++. .++++||+|||||+.+++|++|+++||+++++++++++++|||||++|+++|.+
T Consensus 335 ~LG~a~~v~~~~ig~~~~~~i~~~~~~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~ 414 (531)
T TIGR02346 335 EIGYVDSVYVSEIGGQKVTVFKQENGDSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALR 414 (531)
T ss_pred HccccceEEEEEECCEEEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHH
Confidence 9999999999999999999999887 588999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCc--ccccccCCcccchH
Q 010585 396 VDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGS--VGDMAELGISESFK 473 (507)
Q Consensus 396 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~--~~d~~~~gi~dp~~ 473 (507)
|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|+.++.++|+|+.+|+ +.||++.|||||+.
T Consensus 415 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~~~~~i~d~~~~gI~dp~~ 494 (531)
T TIGR02346 415 LKKYANKLPGLDQYAIKKFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTSSGIDIEAESDGVKDASEAGIYDNLA 494 (531)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeeeCCCccccChhhcCceEcHH
Confidence 9999888899999999999999999999999999999999999999999877778999999999 59999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcCCCCCcC
Q 010585 474 VKQAVLLSATEAAEMILRVDEIITCAPRRRED 505 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~~ 505 (507)
||+++|+.|+|+|++|||||++|..+|...++
T Consensus 495 vk~~~l~~A~e~a~~iL~id~ii~~~~~~~~~ 526 (531)
T TIGR02346 495 TKKWAIKLATEAAVTVLRVDQIIMAKPAGGPK 526 (531)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhccCCCCCCC
Confidence 99999999999999999999999988755443
No 17
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.3e-103 Score=834.33 Aligned_cols=491 Identities=36% Similarity=0.575 Sum_probs=469.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|+++++++|++++||||||+++|+
T Consensus 12 ~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~--g~~~iTnDG~tIlk~l~~~hp~a~ll~~~a~~q~~~~GDGTtt~vvLa 89 (515)
T cd03338 12 SNIQAAKAVADAIRTSLGPRGMDKMIQTGK--GEVIITNDGATILKQMSVLHPAAKMLVELSKAQDIEAGDGTTSVVVLA 89 (515)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeeeeCCC--CCEEEECcHHHHHHhCcCcCHHHHHHHHHHHHHHhHhcCCcchHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++|++++.+++++|+||..|++||+.|++.+++.|+++++|++.++ .+.|+++++|+++||+.+.++++|++++++|
T Consensus 90 ~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~---~~~l~~va~ts~~sK~~~~~~~~ls~li~~A 166 (515)
T cd03338 90 GALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLND---RESLIKSATTSLNSKVVSQYSSLLAPIAVDA 166 (515)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCC---HHHHHHHHHHHhccccchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986322 4679999999999999999999999999999
Q ss_pred HHhhcc-----CCCcccceeeecCCCCCCCceeeeeEEEeecCCCC--CCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 162 VMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIG--QPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 162 ~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~--~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
+.++++ .+|+++|+|+++.|++++||++++|++|++++.+. ||++++||++++++|+|++++++.. .++.++
T Consensus 167 ~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds~lv~Giv~~k~~~~~~~~p~~i~n~ki~ll~~~le~~~~~~~-~~~~i~ 245 (515)
T cd03338 167 VLKVIDPATATNVDLKDIRIVKKLGGTIEDTELVDGLVFTQKASKKAGGPTRIEKAKIGLIQFCLSPPKTDMD-NNIVVN 245 (515)
T ss_pred HHHhhcccccCcCCHHHeEEEEecCCChhhceeeeeEEEeccccCcCCCCccccCCcEEEEeccccccccccC-ceEEeC
Confidence 999864 46788999999999999999999999999997643 5999999999999999999888775 567888
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCC-----CchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccc
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHADFDGIERLALVTGGEIAST 309 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i-----~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~ 309 (507)
+.+++..+.+.|+++++.+++.|++.++++|+++++| ++.+++||.++||++++++++++|+|||++|||+++++
T Consensus 246 ~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~~~I~av~~~~~~~LerIa~~tGa~ii~s 325 (515)
T cd03338 246 DYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAKLKIMVVKDIEREEIEFICKTIGCKPVAS 325 (515)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHHCCceEEecCCHHHHHHHHHHHCCEEecc
Confidence 9999999999999999999999999999999999987 89999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccceEEEEEEcCeEEEEEEccCC-CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCch
Q 010585 310 FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWP 388 (507)
Q Consensus 310 l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~-~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~ 388 (507)
++++++..+|+|+.|++.++|+++|++|++|++ ++.|||+|||+|+.+++|++|+++||+++++++++++++|||||++
T Consensus 326 l~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~ 405 (515)
T cd03338 326 IDHFTEDKLGSADLVEEVSLGDGKIVKITGVKNPGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAP 405 (515)
T ss_pred cccCCHhhCCCCceEEEEEECCeEEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHH
Confidence 999999999999999999999999999999987 6899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCc
Q 010585 389 EMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGI 468 (507)
Q Consensus 389 E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi 468 (507)
|++|+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|+|+.+|++.||++.||
T Consensus 406 e~~ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI 485 (515)
T cd03338 406 EIEIALQLSEWARTLTGVEQYCVRAFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNAGINVRKGAITNILEENV 485 (515)
T ss_pred HHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCccceeccCCCccchhhcCc
Confidence 99999999999888889999999999999999999999999999999999999999877789999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 469 SESFKVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 469 ~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
|||+.+|+++++.|+|+|++|||||++|.+
T Consensus 486 ~dp~~vk~~~l~~A~~~a~~iL~ID~ii~~ 515 (515)
T cd03338 486 VQPLLVSTSAITLATETVRMILKIDDIVLA 515 (515)
T ss_pred eecHHHHHHHHHHHHHHHHHHhccchhhcC
Confidence 999999999999999999999999999864
No 18
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.5e-103 Score=833.00 Aligned_cols=495 Identities=38% Similarity=0.586 Sum_probs=467.5
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
.|++||..|++++++||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++|++++||||||+++|+
T Consensus 16 ~ni~~~~~l~~~vkttlGP~G~~k~I~~~~--g~~~iTnDG~tIlk~i~~~hP~akll~~~a~~qd~~~GDGTTt~viLa 93 (536)
T TIGR02340 16 QNVTAAMAIANIVKTSLGPVGLDKMLVDDI--GDVTITNDGATILKLLEVEHPAAKILVELAQLQDREVGDGTTSVVIIA 93 (536)
T ss_pred HHHHHHHHHHHHHhcCcCCCcCceEEEcCC--CCEEEeccHHHHHHHhcccChHHHHHHHHHHHHHHHhCCChhhHHHHH
Confidence 589999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhc-ccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQK-VVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~-~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||++|.+++++|+||+.|++||+.|++.+++.|++. ++|++... .+.++++++|+++||+.+.++++|++++++
T Consensus 94 ~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~---~~~l~~va~tsl~sK~~~~~~~~ls~l~~~ 170 (536)
T TIGR02340 94 AELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELG---REALINVAKTSMSSKIIGLDSDFFSNIVVD 170 (536)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccc---HHHHHHHHHHHhccccchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999974 88876321 467999999999999999999999999999
Q ss_pred HHHhhc---c----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEE
Q 010585 161 AVMRLK---G----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVR 232 (507)
Q Consensus 161 a~~~~~---~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~ 232 (507)
|+..++ . .+++++|++++++||++++|++++|++|++++. +.||++++||+|++++++|++.+++.. .++.
T Consensus 171 A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s~~i~Gi~i~~~~~~~~m~~~~~n~kIli~~~~L~~~~~~~~-~~~~ 249 (536)
T TIGR02340 171 AVLAVKMTNENGETKYPIKAVNILKAHGGSARESYLVKGYALNCTRASQQMPKRIKKAKIACLDFNLQKQKMALG-VQIV 249 (536)
T ss_pred HHHHHhcccccCccccchHHeEEEEecCCCccccEEEEEEEEecccCCCCCcceecCCcEEEEecCCCCCcccCc-eeEE
Confidence 999884 1 367889999999999999999999999999864 679999999999999999999887764 7889
Q ss_pred EcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCC
Q 010585 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDN 312 (507)
Q Consensus 233 i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~ 312 (507)
++++.++..+.+.|++++.++++.|.+.++++|+++++|+|.+++||.++||++++|+++++|+|||++|||++++++.+
T Consensus 250 ~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~~I~~i~rv~~~~LerIa~~tGa~ii~~~~~ 329 (536)
T TIGR02340 250 VDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEAGAMGVRRCKKEDLKRIAKATGGTLVSTLAD 329 (536)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCEEecchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred C------CCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCC
Q 010585 313 P------ESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 386 (507)
Q Consensus 313 l------~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG 386 (507)
+ ++..+|+|+.|++.++++++|++|++++.++++||+|||+|+.+++|++|+++||+++++++++++++|||||
T Consensus 330 l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGG 409 (536)
T TIGR02340 330 LEGEETFDASYLGFADEVVEERIADDECILIKGTKGRKSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGG 409 (536)
T ss_pred cCccccccccccccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCC
Confidence 4 3455999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcC--------CCceeEEcCCC
Q 010585 387 WPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE--------GCPAGIDVISG 458 (507)
Q Consensus 387 ~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~--------~~~~G~d~~~g 458 (507)
++|++++.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|.++ +.++|||+.+|
T Consensus 410 a~e~~ls~~l~~~~~~~~~~~~~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~~~~Gid~~~g 489 (536)
T TIGR02340 410 AVETALSIYLENFATTLGSREQLAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHLKWYGLDLSNG 489 (536)
T ss_pred HHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCcccccccCceEeEEccCC
Confidence 9999999999998888899999999999999999999999999999999999999988765 34799999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 459 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 459 ~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
++.||++.|||||+.+|+++|+.|+|+|++|||||++|.++|++
T Consensus 490 ~~~d~~~~gI~Dp~~~k~~~l~~A~e~a~~iL~ID~ii~~~~~~ 533 (536)
T TIGR02340 490 KIRDNKEAGVLEPAVSKVKSLKFATEAAITILRIDDLIKLNPEQ 533 (536)
T ss_pred ccccchhccceecHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCC
Confidence 99999999999999999999999999999999999999998754
No 19
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.6e-101 Score=811.41 Aligned_cols=462 Identities=32% Similarity=0.501 Sum_probs=441.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|+.++|++|++++||||||+++|+
T Consensus 16 ~ni~a~~~l~~~vkttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hP~a~l~~~~a~~qd~~~GDGTTt~vvLa 93 (484)
T cd03342 16 VNISAAKGLQDVLKTNLGPKGTLKMLVSGA--GDIKLTKDGNVLLSEMQIQHPTASMIARAATAQDDITGDGTTSNVLLI 93 (484)
T ss_pred HHHHHHHHHHHHHhcCcCCCCCceEEECCC--CCEEEeccHHHHHHhccCcCHHHHHHHHHHHHhhhHhCCChhhHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCC--ChhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKE--NAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~--~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
++|++++.+++++|+||..|++||++|++.+++.|++++++++. + .+.++++|+++++||+.+.+.++|+++++
T Consensus 94 ~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~----~~~l~~va~ts~~sk~~~~~~~~l~~l~~ 169 (484)
T cd03342 94 GELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTD----RELLLSVARTSLRTKLHADLADQLTEIVV 169 (484)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC----HHHHHHHHHHHhCcccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999873 3 47899999999999999999999999999
Q ss_pred HHHHhhcc---CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcC
Q 010585 160 DAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDS 235 (507)
Q Consensus 160 ~a~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~ 235 (507)
+|+..+++ .+|+++|+|++++||++++|++++|++|++++. +.||++++||+|++++++|++++++.. .++.++
T Consensus 170 ~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds~~i~G~~~~~~~~~~~m~~~~~n~~Ill~~~~le~~~~~~~-~~~~~~- 247 (484)
T cd03342 170 DAVLAIYKPDEPIDLHMVEIMQMQHKSDSDTKLIRGLVLDHGARHPDMPKRVENAYILTCNVSLEYEKTEVN-SGFFYS- 247 (484)
T ss_pred HHHHHHhhcCCccChhHeEEEEecCCChhhceEEeeEEEecCCCCCCCCccccCceEEEEeCCCCCCccccC-cEEEEE-
Confidence 99999864 568889999999999999999999999999964 678999999999999999999887654 333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCC
Q 010585 236 MSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPES 315 (507)
Q Consensus 236 ~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~ 315 (507)
+|+|+++|+|.+++||.++||++++++++++|+|||++|||+++++++++++
T Consensus 248 ----------------------------lvi~~~~I~~~al~~l~~~~I~av~~~~~~~l~~ia~~tGa~ii~~l~~~~~ 299 (484)
T cd03342 248 ----------------------------VVINQKGIDPPSLDMLAKEGILALRRAKRRNMERLTLACGGVAMNSVDDLSP 299 (484)
T ss_pred ----------------------------EEEeCCCccHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCEEecccccCCh
Confidence 9999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHH
Q 010585 316 VKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKE 395 (507)
Q Consensus 316 ~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~ 395 (507)
.++|+|+.+++..+|+++|++|++|+.++.+||+|||+|+.+++|++|+++||+++++++++++++||||||+|++|+.+
T Consensus 300 ~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~tI~lrg~t~~~l~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~ 379 (484)
T cd03342 300 ECLGYAGLVYERTLGEEKYTFIEGVKNPKSCTILIKGPNDHTITQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAH 379 (484)
T ss_pred hhCcccceEEEEEECCeEEEEEECCCCCcEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHH
Q 010585 396 VDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVK 475 (507)
Q Consensus 396 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk 475 (507)
|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.++++++|+|+.+|++.||++.|||||+.+|
T Consensus 380 L~~~~~~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk 459 (484)
T cd03342 380 LKEFKKSVKGKAKLGVQAFADALLVIPKTLAENSGLDVQETLVKLQDEYAEGGQVGGVDLDTGEPMDPESEGIWDNYSVK 459 (484)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeeCCCCcccchhhcCcEEcHHHH
Confidence 99998888999999999999999999999999999999999999998998888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 476 QAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 476 ~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
+++|+.|+|+|++|||||++|.++
T Consensus 460 ~~~l~~A~e~a~~iL~ID~ii~~~ 483 (484)
T cd03342 460 RQILHSATVIASQLLLVDEIIRAG 483 (484)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhcC
Confidence 999999999999999999999774
No 20
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-101 Score=728.28 Aligned_cols=491 Identities=37% Similarity=0.558 Sum_probs=470.4
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+||.|++++++.++|||||+||||||+.+. |+++|||||+|||+.|.+-||+++||++++..||.++||||||+|+|+
T Consensus 30 sni~Aa~avadairTSLGPkGmDKMIq~~~--gev~iTNDGaTILk~m~vlhP~akmLvelS~aQD~eaGDGTTsVVila 107 (534)
T KOG0358|consen 30 SNIQAARAVADAIRTSLGPKGMDKMIQTGK--GEVIITNDGATILKQMNVLHPAAKMLVELSAAQDSEAGDGTTSVVILA 107 (534)
T ss_pred HHHHHHHHHHHHHHhccCccchhhHhhcCC--CcEEEecChHHHHHHHhhhChHHHHHHHhhhhccccccCCceEEEEeh
Confidence 799999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+.+..|+++|+||+.|.+.|+.|.+.++++|.+++.|++..+ ++.|.+-+.|+|+||+.++++..++.+.++|
T Consensus 108 GaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsd---re~Li~~atTsLnSKvvSq~s~llapmAVdA 184 (534)
T KOG0358|consen 108 GALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSD---RESLIKSATTSLNSKVVSQYSSLLAPMAVDA 184 (534)
T ss_pred hhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCc---HHHHHHHHHhHhhHHHHHhhccccchHHHHH
Confidence 9999999999999999999999999999999999999999987643 5789999999999999999999999999999
Q ss_pred HHhhcc-----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcC
Q 010585 162 VMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDS 235 (507)
Q Consensus 162 ~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~ 235 (507)
+.++-. ++|+++|+|++..||.++|+++++|++|++... ...|+++++++|.+++|.+.++++.+. .++.+++
T Consensus 185 V~kv~dp~~~~nvdlkdIkivkklGgtvdDte~i~glvl~~~~~~~~gptriekAkIglIQF~iS~PKtdme-n~iiv~D 263 (534)
T KOG0358|consen 185 VLKVIDPENATNVDLKDIKIVKKLGGTVDDTELIKGLVLTQKASKSAGPTRIEKAKIGLIQFQISPPKTDME-NQIIVND 263 (534)
T ss_pred HHhccCcccccccchhhhhhHHhhCCccchhhhhcceEEeeecccCCCcchhhhceeeEEEEEecCCCCCcc-cceEecC
Confidence 998743 578899999999999999999999999998864 347999999999999999999999886 6799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCC-----CchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeecccc
Q 010585 236 MSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTF 310 (507)
Q Consensus 236 ~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i-----~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l 310 (507)
+.|+.+..++|++|+.+++++|++.|+|+++.|++| +|.+++||++.+|+|++.+.++++|.+|+.+|+.++.++
T Consensus 264 yaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL~klkimvikdieRediefick~l~c~Pia~i 343 (534)
T KOG0358|consen 264 YAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFLAKLKIMVIKDIEREDIEFICKTLGCKPIADI 343 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHHHhCcEEEEccccHhhHHHHHhhcCCeecchh
Confidence 999999999999999999999999999999999976 679999999999999999999999999999999999999
Q ss_pred CCCCCCCccccceEEEEEEcCe-EEEEEEccCC-CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCch
Q 010585 311 DNPESVKLGHCKLIEEIMIGED-KLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWP 388 (507)
Q Consensus 311 ~~l~~~~lG~~~~v~~~~ig~~-~~~~~~~~~~-~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~ 388 (507)
+.+++..+|+++.+++..-+|+ +++.+.|+.+ +..+||++||++..+++|.+|++|||||++|++++.+.++||||+.
T Consensus 344 d~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGap 423 (534)
T KOG0358|consen 344 DHFTADKLGSADLVEETDSSGEGKIVKITGIQNAGRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAP 423 (534)
T ss_pred hhcChhhcCcchhhhhcccCCCccEEEEEEeecCCCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCc
Confidence 9999999999999998855554 9999999887 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCc
Q 010585 389 EMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGI 468 (507)
Q Consensus 389 E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi 468 (507)
|+.+|..|.+++++..|.+.|++++||+|||.||.||++|||++|+.++++||..|.+|+.+.|+++..|.+.||++..|
T Consensus 424 Eieia~~L~~~a~t~eG~~~yc~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~~tni~ee~V 503 (534)
T KOG0358|consen 424 EIEIALRLSALARTLEGVEAYCWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGGITNILEENV 503 (534)
T ss_pred chHHHHHHHHHHhhhccchhHHHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeecccchhhHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 469 SESFKVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 469 ~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
+.|+.|-.++++.|+|++.|||+||+|+.+
T Consensus 504 vQPllVs~SaitlA~Etvr~ILKIDDIv~a 533 (534)
T KOG0358|consen 504 VQPLLVSISAITLATETVRSILKIDDIVNA 533 (534)
T ss_pred ccceeeeHHHHHHHHHHHHHHhhhhhhccc
Confidence 999999999999999999999999999865
No 21
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.7e-99 Score=795.98 Aligned_cols=449 Identities=33% Similarity=0.528 Sum_probs=427.7
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|++++|++|++++||||||+++|+
T Consensus 20 ~ni~a~~~l~~~~~tslGP~G~~kmi~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~q~~~~GDGTtt~vvL~ 97 (480)
T cd03337 20 GNIQAAKTVADVIRTCLGPRAMLKMLLDPM--GGIVLTNDGNAILREIDVAHPAAKSMIELSRTQDEEVGDGTTSVIILA 97 (480)
T ss_pred HHHHHHHHHHHHHhccCCCCcCceEeEcCC--CCEEEeccHHHHHHhccccChHHHHHHHHHHhHHHHhCCCcchhHhhH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+|+++|+||..|++||+.|++.+++.|+++++|++..+ .+.+.++++|+++||+.+.|.+.|++++++|
T Consensus 98 ~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~i~~t~l~sK~~~~~~~~ls~lv~~A 174 (480)
T cd03337 98 GEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVND---RAQMLKIIKSCIGTKFVSRWSDLMCNLALDA 174 (480)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCC---HHHHHHHHHHHhccCcchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986422 4679999999999999999999999999999
Q ss_pred HHhhccC-------CCcc-cceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEE
Q 010585 162 VMRLKGS-------TNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVR 232 (507)
Q Consensus 162 ~~~~~~~-------~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~ 232 (507)
+..++++ +|++ +|+|++++||+++||++++|++|++++. ..||++++||||++++++|++
T Consensus 175 i~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds~li~Gvvi~k~~~~~~m~~~~~n~kIlll~~~Le~----------- 243 (480)
T cd03337 175 VKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDSRVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEY----------- 243 (480)
T ss_pred HHhhccccCCCCCcCChhhceEEEEecCCCHHhcccccceEEeccCCCCCCCcEecCCCEEEEecCcce-----------
Confidence 9998642 3443 5999999999999999999999999975 569999999999999998865
Q ss_pred EcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCC
Q 010585 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDN 312 (507)
Q Consensus 233 i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~ 312 (507)
+|+++++|+|.+++||.++||++++++++++|+|||++|||++++++++
T Consensus 244 -------------------------------lvi~~k~I~d~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ii~~~~~ 292 (480)
T cd03337 244 -------------------------------LVITEKGVSDLAQHYLVKAGITALRRVRKTDNNRIARACGATIVNRPEE 292 (480)
T ss_pred -------------------------------EEEeCCCccHHHHHHHHHCCcEEEEeCCHHHHHHHHHHHCCEEecchhh
Confidence 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccc-cceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHH
Q 010585 313 PESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMV 391 (507)
Q Consensus 313 l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~ 391 (507)
++++.+|+ |+.+++.++++++|++|++|++++.+||+|||+|+.+++|.+|+++||+++++++++++++|||||++|++
T Consensus 293 l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ 372 (480)
T cd03337 293 LTESDVGTGAGLFEVKKIGDEYFTFITECKDPKACTILLRGASKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMA 372 (480)
T ss_pred CCHHHcCCcccEEEEEEeCCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHH
Confidence 99999999 67778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcC-CCceeEEcCCCcccccccCCccc
Q 010585 392 MAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDVISGSVGDMAELGISE 470 (507)
Q Consensus 392 la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~-~~~~G~d~~~g~~~d~~~~gi~d 470 (507)
++.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+ +.++|+|+.+|++.||++.||||
T Consensus 373 ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~d 452 (480)
T cd03337 373 VSHALSEKAKSIEGVEQWPYKAVASALEVIPRTLAQNCGANVIRTLTELRAKHAQGENSTWGIDGETGDIVDMKELGIWD 452 (480)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCCeECeeccCCCcccchhccCeE
Confidence 99999999988899999999999999999999999999999999999999999877 67899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 471 SFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 471 p~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.+|+++++.|+|+|++|||||++|.
T Consensus 453 p~~vk~~~l~~A~e~a~~iL~id~ii~ 479 (480)
T cd03337 453 PLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhheec
Confidence 999999999999999999999999985
No 22
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=8.5e-98 Score=781.54 Aligned_cols=452 Identities=34% Similarity=0.530 Sum_probs=428.3
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||..|++++++||||+||+|||++.. |+++|||||+||+++|+++||+++|+++++++|++++||||||+++|+
T Consensus 12 ~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~~~~~~GDGTTt~vvL~ 89 (472)
T cd03341 12 RNIEACKELSQITRTSYGPNGMNKMVINHL--EKLFVTSDAATILRELEVQHPAAKLLVMASQMQEEEIGDGTNLVVVLA 89 (472)
T ss_pred HHHHHHHHHHHHHhcCcCCCCCceEEEcCC--CCEEEeCcHHHHHHhccccCHHHHHHHHHHHHHhhhhCCChhhHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccc-cCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVD-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~-~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||+++.+++++|+||+.|++||+.|++.+++.|++++++ +.... ..+.+..+++|+++||..+ ++++|++++++
T Consensus 90 ~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~--~~~~l~~i~~t~l~sk~~~-~~~~l~~l~~~ 166 (472)
T cd03341 90 GELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLR--NKEEVSKALKTAIASKQYG-NEDFLSPLVAE 166 (472)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCcc--CHHHHHHHHHHHhcccccc-hHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876 43211 1467999999999999876 68999999999
Q ss_pred HHHhhcc----CCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 161 AVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 161 a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
|+..+++ .+++++|+|++++||+++||++++|++|++.. ..++++++||+|++++++|++
T Consensus 167 a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds~lv~Giv~~~~~-~~~~~~~~n~~Ili~~~~Le~--------------- 230 (472)
T cd03341 167 ACISVLPENIGNFNVDNIRVVKILGGSLEDSKVVRGMVFKREP-EGSVKRVKKAKVAVFSCPFDI--------------- 230 (472)
T ss_pred HHHHHhhccCCcCChhHeEEEEecCCCcccceEEeeEEEcccc-CCCceeccCCcEEEEeccccC---------------
Confidence 9999863 46778999999999999999999999998765 356689999999999998865
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
++++|+++++|+|.+++||.++||++++++++++|+|||++|||+++++++++++.
T Consensus 231 ------------------------g~~lvi~~~~I~d~al~~l~~~~I~av~~~~~~~Le~Ia~~tGa~ii~~~~~l~~~ 286 (472)
T cd03341 231 ------------------------GVNVIVAGGSVGDLALHYCNKYGIMVIKINSKFELRRLCRTVGATPLPRLGAPTPE 286 (472)
T ss_pred ------------------------CCeEEEECCCCCHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHh
Confidence 88999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccCC-CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKE 395 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~~-~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~ 395 (507)
++|+|+.|++..+|+++|++|+++.. ++++||+|||+|+.+++|+||+++||+++++++++++++|||||++|++++.+
T Consensus 287 ~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~ 366 (472)
T cd03341 287 EIGYCDSVYVEEIGDTKVVVFRQNKEDSKIATIVLRGATQNILDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKK 366 (472)
T ss_pred HCCCceEEEEEEECCeeEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHH
Confidence 99999999999999999999999987 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCC--cccccccCCcccchH
Q 010585 396 VDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG--SVGDMAELGISESFK 473 (507)
Q Consensus 396 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g--~~~d~~~~gi~dp~~ 473 (507)
|++++...++++++++++|++||+.||++|++|||+|+.+++.+|+..|+.++.++|+|+.+| ++.||++.|||||+.
T Consensus 367 l~~~~~~~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~g~~~~~d~~~~gI~dp~~ 446 (472)
T cd03341 367 LKEYGEKTPGLEQYAIKKFAEAFEVVPRTLAENAGLDATEVLSELYAAHQKGNKSAGVDIESGDEGTKDAKEAGIFDHLA 446 (472)
T ss_pred HHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCeeeeeccCCCCCccChhhccceecHH
Confidence 999988888999999999999999999999999999999999999998977777899999999 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 474 VKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
||+++|+.|+|+|++|||||++|.+
T Consensus 447 vk~~~l~~A~e~a~~iL~id~ii~~ 471 (472)
T cd03341 447 TKKWAIKLATEAAVTVLRVDQIIMA 471 (472)
T ss_pred HHHHHHHHHHHHHHHHhhhcceeec
Confidence 9999999999999999999999865
No 23
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=2.6e-96 Score=772.63 Aligned_cols=449 Identities=46% Similarity=0.689 Sum_probs=430.9
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
.|++||..+++++++||||+|++|||+++. |+++|||||+||+++|+++||+++|+++++++|++++||||||+++|+
T Consensus 12 ~~~~~~~~l~~~v~tslGP~G~~k~i~~~~--g~~~iTnDG~tIlk~i~~~hp~a~ll~~~~~~~~~~~GDGTtt~viL~ 89 (464)
T cd00309 12 SNINAAKALADAVKTTLGPKGMDKMLVDSL--GDPTITNDGATILKEIEVEHPAAKLLVEVAKSQDDEVGDGTTTVVVLA 89 (464)
T ss_pred HHHHHHHHHHHHHhcccCCCcCcEEEEcCC--CCeEEEccHHHHHHhccCcCHHHHHHHHHHHHHHhHhCCchhHHHHHH
Confidence 589999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++|++++.+++++|+||..|++||+.|++.+++.|+++++|++..+ .+.++++++|+++||+.+.+++++++++++|
T Consensus 90 ~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~ia~tsl~sK~~~~~~~~l~~l~~~A 166 (464)
T cd00309 90 GELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVED---REELLKVATTSLNSKLVSGGDDFLGELVVDA 166 (464)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCC---HHHHHHHhHhcccccccccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999854322 4789999999999999999999999999999
Q ss_pred HHhhcc---CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCHH
Q 010585 162 VMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMS 237 (507)
Q Consensus 162 ~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~ 237 (507)
+..+++ .++.++|+|++.+||+++||++++|++|++++. +.||++++||||++++++|++
T Consensus 167 i~~v~~~~~~~~~~~I~i~k~~gg~~~ds~li~Gi~~~~~~~~~~m~~~~~n~~Ili~~~~Le~---------------- 230 (464)
T cd00309 167 VLKVGKENGDVDLGVIRVEKKKGGSLEDSELVVGMVFDKGYLSPYMPKRLENAKILLLDCKLEY---------------- 230 (464)
T ss_pred HHHhccccCccccceEEEEecCCCCcccceeeeeEEEecCCCCCCCceeecCceEEEEecCcce----------------
Confidence 999876 456789999999999999999999999999975 567899999999999998865
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCC
Q 010585 238 KAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVK 317 (507)
Q Consensus 238 ~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~ 317 (507)
+|+++++|++.++++|.++||++++++++++|+|||++|||+++++++++++.+
T Consensus 231 --------------------------lIi~~~~I~~~al~~L~~~~I~~v~~~~~~~L~~Ia~~tGa~ii~~~~~~~~~~ 284 (464)
T cd00309 231 --------------------------VVIAEKGIDDEALHYLAKLGIMAVRRVRKEDLERIAKATGATIVSRLEDLTPED 284 (464)
T ss_pred --------------------------EEecCCCcCHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCccc
Confidence 999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHH
Q 010585 318 LGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVD 397 (507)
Q Consensus 318 lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~ 397 (507)
+|+|+.+++..+|+++|++|+++..++.|||+|||+|+.+++|++|+++||+++++++++++++|||||++|++++++|+
T Consensus 285 lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrG~t~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~ 364 (464)
T cd00309 285 LGTAGLVEETKIGDEKYTFIEGCKGGKVATILLRGATEVELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALE 364 (464)
T ss_pred CccccEEEEEEEcCeeEEEEEecCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHH
Q 010585 398 ELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQA 477 (507)
Q Consensus 398 ~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~ 477 (507)
+++...++++++++++|++||+.||++|++|||+|+.+++.+|+..|.++..++|+|..+|++.||++.|||||+.+|++
T Consensus 365 ~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~ 444 (464)
T cd00309 365 ELAKTLPGKEQLGIEAFADALEVIPRTLAENAGLDPIEVVTKLRAKHAEGGGNAGGDVETGEIVDMKEAGIIDPLKVKRQ 444 (464)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhccCCCeeEECCCCcEeehhhccCeecHHHHHH
Confidence 99988899999999999999999999999999999999999999989877778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHhhh
Q 010585 478 VLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 478 ~l~~A~e~a~~iL~iD~iI~ 497 (507)
+++.|+|+|++||+||++|.
T Consensus 445 ~l~~A~e~a~~iL~id~ii~ 464 (464)
T cd00309 445 ALKSATEAASLILTIDDIIV 464 (464)
T ss_pred HHHHHHHHHHHHHhHHHHhC
Confidence 99999999999999999984
No 24
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-96 Score=761.91 Aligned_cols=490 Identities=38% Similarity=0.589 Sum_probs=462.7
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.|++.++++|++||||+||+|||+++. |+++|||||+||+++|+++||+|+|++++|.+|++++||||||++||+
T Consensus 15 ~~~~~~~~la~~vkttLGPkG~~k~l~~~~--g~~~iTnDG~tIlkeielehp~akll~eva~~qd~e~GDGTTtavVLa 92 (524)
T COG0459 15 SNIRAARALADAVKTTLGPKGRNKMLVDSG--GDITITNDGVTILKEIELEHPGAKLLVEVAKKQDDEAGDGTTTAVVLA 92 (524)
T ss_pred HHHHHHHHHHHHHHhccCCCcCceEEecCC--CCEEEecCcceehhhhhccCchhHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 689999999999999999999999999995 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++++|+||+.|++||++|.+.+++.|++++.++..+. ... +++.|+++||..+++ +++++++++|
T Consensus 93 ~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~----~~~-~~~~t~v~sk~~~~~-~~i~~lv~~A 166 (524)
T COG0459 93 GALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSE----EEL-KIAITSVASKSANSD-EEIGELVVEA 166 (524)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcch----hhh-hhhhheeeeeeccCh-HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998763 222 889999999987776 9999999999
Q ss_pred HHhhcc-CCCcccceeeecCCCCCCCceeeeeEEEeecC--CCCCC-ccccCccEEEeeeccccccccccCeEEEEcCHH
Q 010585 162 VMRLKG-STNLESIQIIKKPGGSLKDSFLDEGFILDKKI--GIGQP-KRIENAKILVANTAMDTDKVKIYGARVRVDSMS 237 (507)
Q Consensus 162 ~~~~~~-~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~--~~~~~-~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~ 237 (507)
+.+++. +.|++.|.+++..|++..++++++|++|++++ ++.|| +.++||+|+++|++|+..+++.. .++.+++.+
T Consensus 167 v~~v~~~~~d~~~i~~vk~~gg~~~e~~vveG~~~dkg~~s~~~~~~~~~e~~~Ili~d~~l~~~k~~l~-~e~~i~~~~ 245 (524)
T COG0459 167 VEKVGKEQSDLDGIIIVKESGGSETELEVVEGMVFDKGYLSPYFMPDKRLENPKILLLDKKLEIKKPELP-LEIVISSGK 245 (524)
T ss_pred HHHhcccccccCCeEEEEecCCCccceEEEeeEEecCCccCCCCCCccccccceEEEEccccccccccCc-ceeEecCcc
Confidence 999965 23678999999999999999999999999953 36789 89999999999999999999987 889999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHcCCe-EEEeCCCCCchHHHHHHHcCCeEEecCChhhH-HHHHHHhCCeeccccCCCC
Q 010585 238 KAAEIEGAEK-QKMREKVQKIIAHGIN-CFVNRQLIYNFPEELFADAGILAIEHADFDGI-ERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 238 ~l~~l~~~e~-~~l~~~~~~i~~~~v~-lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L-~~ia~~tGa~ii~~l~~l~ 314 (507)
++..+.+.|+ +.+..++..+++.++| +++++++++|.+++||.+.+|++++++.++++ ++|+.+|||++++..++++
T Consensus 246 ~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~~~l~~~~ga~~v~~~~d~t 325 (524)
T COG0459 246 PLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLGERLAKLGGAKIVSVLKDLT 325 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhHHHHHHccCceEEeecccCc
Confidence 9999988888 9999999999999999 99999999999999999999999999999999 8999999999999999999
Q ss_pred CCCccc--cceEEEEEEcCeEEEEEEccCC--CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHH
Q 010585 315 SVKLGH--CKLIEEIMIGEDKLIHFSGVEM--GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 390 (507)
Q Consensus 315 ~~~lG~--~~~v~~~~ig~~~~~~~~~~~~--~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~ 390 (507)
+..+|. |+.+++..++++++.+|++++. +++|||+|||+|+.+++|.+|+++|||+++|++++++++|||||++|+
T Consensus 326 ~~~~G~~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~tI~vrgate~~ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~ 405 (524)
T COG0459 326 TIVLGEGAAGLVEETKTGDYDMEKLQERKAKAGGVATILVRGATEVELDEKERRIEDALNVVRAAVEEGKIVPGGGAAEI 405 (524)
T ss_pred eeecCccccceEEEeeccchhhhhhhhhhhcCCCeEEEEECCccHhHHHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHH
Confidence 999999 9999999999999999999985 889999999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHHhhcCCC-hhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcc-cccccCCc
Q 010585 391 VMAKEVDELARKTPG-KKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV-GDMAELGI 468 (507)
Q Consensus 391 ~la~~L~~~~~~~~~-~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~-~d~~~~gi 468 (507)
+++..|++++...++ ++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .+.+|+|+.+|++ .||++.||
T Consensus 406 ~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~v~~~L~~~~~--~~~~G~d~~~~~~~~dm~~~GI 483 (524)
T COG0459 406 EAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPIEVLSKLRSAHA--TTNYGIDAFTGEYEDDMIEAGI 483 (524)
T ss_pred HHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccc--CCccceeccCCccccchHhccC
Confidence 999999998555555 9999999999999999999999999999999999999774 3459999999999 77999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 469 SESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 469 ~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
|||+.||+++|+.|+|+|.||||+|++|.+.|..
T Consensus 484 ~dP~~v~~~al~~A~e~a~llL~~d~iI~~~~~~ 517 (524)
T COG0459 484 IDPLKVKRSALKNAAEAAGLLLTIDDIIAAKPEE 517 (524)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Confidence 9999999999999999999999999999999875
No 25
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=1.7e-94 Score=766.78 Aligned_cols=482 Identities=43% Similarity=0.645 Sum_probs=459.8
Q ss_pred HHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHHHHHHHHHH
Q 010585 10 IADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAE 89 (507)
Q Consensus 10 l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~ 89 (507)
|+++|++||||+|++|||++.. |++++||||+||+++|+++||+++|+++++++|++++||||||+++|+++|++++.
T Consensus 1 l~~~v~sslGP~G~~kli~~~~--g~~~iTndg~tIl~~l~~~~P~~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~~~ 78 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDS--GKIIITNDGATILKSLKINHPIAKLLVEASKSQDEEVGDGTTSVVLLACELLRNAL 78 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESS--SSEEEESSHHHHHHHSTBSSHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCC--CCeEEEechhHHHHHhhhccchhhhHHHhHHHHHhhhccccceeeecccchhhhhh
Confidence 6899999999999999999986 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhccCC
Q 010585 90 KLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGST 169 (507)
Q Consensus 90 ~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a~~~~~~~~ 169 (507)
+++++|+||..|++||+.|++.+++.|++++++++.+. +.++++++|++++|+...|.++|++++++|+..+..++
T Consensus 79 ~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~----~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~ 154 (485)
T PF00118_consen 79 KLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDD----ESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNF 154 (485)
T ss_dssp HHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTS----HHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTH
T ss_pred hhhhccccccchhhhhhhhhhhhhhhhhhhhccccccc----hhhhhhhcccccccccccchhhhhhhHHHHHHhhcccc
Confidence 99999999999999999999999999999999987652 68999999999999999999999999999996555557
Q ss_pred CcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHH
Q 010585 170 NLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQ 248 (507)
Q Consensus 170 ~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~ 248 (507)
++++++++++.|++.+||++++|+++++++. .+||+++++|+|++++++|+++++ . +.++.+++.+++..+.++|++
T Consensus 155 ~~~~i~i~~i~g~~~~dS~li~Giv~~~~~~~~~~~~~~~~~~Ill~~~~L~~~~~-~-~~~~~~~~~~~~~~~~~~e~~ 232 (485)
T PF00118_consen 155 DLDNIKIIKIPGGSISDSELINGIVLDKGFSSPNMPKKIENPKILLLNCPLEYSKS-F-KSEIRITSPEQLDELSKQEKK 232 (485)
T ss_dssp HGGGEEEEEEESSSSGGEEEESEEEESSSBSSTTSBSEEESEEEEEESSEBSSCCH-S-TEEEEESSTHHHHHHHHHHHH
T ss_pred cccchhhhhhccccccccccccceeeeccccccccccccccceEEeeecccccccc-c-ccccchhhHHHHHHHHhhhhh
Confidence 7788999999999999999999999999875 458999999999999999999987 4 588999999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEE
Q 010585 249 KMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIM 328 (507)
Q Consensus 249 ~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ 328 (507)
+++.++++|.+.++++|+++++|++.++++|.++||.++++++.++|++|+++|||+++++++++++..+|+|+.+++..
T Consensus 233 ~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~~i~~v~~~~l~~i~~~tg~~ii~~~~~l~~~~lG~~~~v~~~~ 312 (485)
T PF00118_consen 233 YLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGILVIRRVSKEDLERIARATGASIISSLDDLSDEDLGFCKSVEERE 312 (485)
T ss_dssp HHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTHEEESSEHHHHHHHHHHHHTSBEBSSCGGSTGGGSEEEEEEEEEE
T ss_pred hhccccceEeeeccceeeeecccccccchhhhhhhhhccccchHHHHHhhhcccCCcEecccccccchhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred EcCeEEEEEE--ccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCCh
Q 010585 329 IGEDKLIHFS--GVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGK 406 (507)
Q Consensus 329 ig~~~~~~~~--~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~ 406 (507)
+++++|++|+ ++..++.+||+|||+++.+++|++++++||+++++++++++++|||||++|++|+++|++++.+.+++
T Consensus 313 i~~~~~~~~~~~~~~~~~~~Till~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 392 (485)
T PF00118_consen 313 IGNKKYIFIEGIGCLSSKICTILLRGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGK 392 (485)
T ss_dssp ETSSEEEEEEEHSESSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSH
T ss_pred cccccccccccccccccCceEEEeccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCc
Confidence 9999999999 58889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHH
Q 010585 407 KSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAA 486 (507)
Q Consensus 407 ~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a 486 (507)
+++++++|++||+.||++|++|||+|+.+++++++..|+.+ +++|+|+.+|++.||.+.|||||+.+|+++|+.|+|+|
T Consensus 393 ~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~h~~~-~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l~~A~~~a 471 (485)
T PF00118_consen 393 EQLAIEAFADALESIPKTLAQNAGLDSSEVISKLKSFHNNG-NNYGIDLDTGEIVDMKEAGILDPLLVKISALKSAVEIA 471 (485)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTSTHHHHHHHHHHHHHST-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhhhhhhhccCCCceeeehhhHhhhccc-cccCcCccCCceeccccccchhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988654 48999999999999999999999999999999999999
Q ss_pred HHHHhhhHhhhcCC
Q 010585 487 EMILRVDEIITCAP 500 (507)
Q Consensus 487 ~~iL~iD~iI~~~~ 500 (507)
++|||||++|.++|
T Consensus 472 ~~iL~id~iI~~~~ 485 (485)
T PF00118_consen 472 SLILRIDEIIMAKP 485 (485)
T ss_dssp HHHHTEEEEEEESS
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999876
No 26
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=9.8e-90 Score=726.47 Aligned_cols=449 Identities=25% Similarity=0.375 Sum_probs=409.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
.|+.|++.++++++|||||+||+|||+++. |+++|||||+||+++|+++|| +|+|++++|++|++++||||||+
T Consensus 14 ~~~~~~~~la~~v~tTLGP~G~~kmi~~~~--g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~GDGTTtv 91 (542)
T PRK12849 14 ALERGVNKLADAVKVTLGPKGRNVVIDKSF--GAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASKTNDVAGDGTTTA 91 (542)
T ss_pred HHHHHHHHHHHHHhcccCCCCCCEEEECCC--CCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHhcCCccCCCccHH
Confidence 489999999999999999999999999997 999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|++.+++.|+++++|++. .++++++++|+. +++++++++
T Consensus 92 viLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~-----~~~l~~va~ts~------~~~~~l~~l 160 (542)
T PRK12849 92 TVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSG-----SEEIAQVATISA------NGDEEIGEL 160 (542)
T ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHhc------CChHHHHHH
Confidence 999999999999999999999999999999999999999999999863 367999998874 478999999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCC-ceeeeeEEEeecCC-C-------CCCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKD-SFLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~d-S~l~~Givl~~~~~-~-------~~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+..++.+.. +.+. .|++.+| +++++|++|++++. + .|++.++||+|+++|+.+
T Consensus 161 v~~Av~~v~~~g~---i~i~--~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i--------- 226 (542)
T PRK12849 161 IAEAMEKVGKDGV---ITVE--ESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKI--------- 226 (542)
T ss_pred HHHHHHHhccCCc---EeEE--eCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCc---------
Confidence 9999999875443 3333 6888876 79999999998864 2 368899999999999733
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHc------CCeEEecCCh-----hhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHADF-----DGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~------~I~~i~~v~~-----~~L~~ 297 (507)
++.+++. .+++++.+.++++|+++++|+|.++++|.++ +|++++++++ ++|+|
T Consensus 227 -----~~~~~~~-----------~~l~~i~~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ 290 (542)
T PRK12849 227 -----SSLQDLL-----------PLLEKVAQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLED 290 (542)
T ss_pred -----CCHHHHH-----------HHHHHHHHhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHH
Confidence 3444443 3578888899999999999999999999999 9999999884 45999
Q ss_pred HHHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCCC-----------------------------
Q 010585 298 LALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG----------------------------- 343 (507)
Q Consensus 298 ia~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------- 343 (507)
||.+|||++++ +++++++.++|+|+.|++ +.++|++++++.++
T Consensus 291 ia~~tGa~~v~~~~~~~~~~~~~~~LG~~~~v~~---~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR 367 (542)
T PRK12849 291 IAILTGGTVISEDLGLKLEEVTLDDLGRAKRVTI---TKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQER 367 (542)
T ss_pred HHHHhCCEEecccccCCcccCCHHHCceeeEEEE---eeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 99999999999 688888889999999984 45899999888764
Q ss_pred ------ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 344 ------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 344 ------~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
+.+||+|||+|+.+++|++|+++||++++++++++ ++|||||++|+++|.+|++++ ..++++|+++++|++|
T Consensus 368 ~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl~~~~~a~~~-g~VpGGGa~e~~ls~~L~~~~-~~~g~~~~~i~~~a~A 445 (542)
T PRK12849 368 LAKLAGGVAVIKVGAATEVELKERKDRVEDALNATRAAVEE-GIVPGGGVALLRAAKALDELA-GLNGDQAAGVEIVRRA 445 (542)
T ss_pred HHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHc-CeecCCCHHHHHHHHHHHHhh-CCChHHHHHHHHHHHH
Confidence 48999999999999999999999999999999987 599999999999999999998 8899999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++.+|+..| +++|||+.+|++.||++.|||||+.+|.++|+.|+|+|++||+||++|.
T Consensus 446 l~~ip~~La~NaG~d~~~vi~~L~~~~----~~~G~d~~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~iL~id~iI~ 521 (542)
T PRK12849 446 LEAPLRQIAENAGLDGSVVVAKVLELE----DGFGFNAATGEYGDLIAAGIIDPVKVTRSALQNAASVAGLLLTTEALVA 521 (542)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHhhC----CCcceeCCCCccccHHhccCccCHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 999999999999999999999998764 5799999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 010585 498 CAPRR 502 (507)
Q Consensus 498 ~~~~~ 502 (507)
.+|.+
T Consensus 522 ~~~~~ 526 (542)
T PRK12849 522 DKPEE 526 (542)
T ss_pred cCCcc
Confidence 88754
No 27
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.4e-89 Score=725.42 Aligned_cols=451 Identities=24% Similarity=0.379 Sum_probs=413.9
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
+|++|++.++++++|||||+||+|||+++. |+++|||||+||+|+|++.|| +++|++++|++|++++||||||+
T Consensus 14 ~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~qd~e~GDGTTtv 91 (542)
T PRK00013 14 KLLRGVNKLADAVKVTLGPKGRNVVLEKSF--GAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASKTNDVAGDGTTTA 91 (542)
T ss_pred HHHHHHHHHHHHhhccCCCCCCCEEEECCC--CCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHhcCcccCCccchH
Confidence 589999999999999999999999999997 999999999999999999999 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ + .+++.+++.|++ ++++.++++
T Consensus 92 viLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~-~----~~~l~~va~ts~------~~~~~ls~l 160 (542)
T PRK00013 92 TVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVE-D----KEEIAQVATISA------NGDEEIGKL 160 (542)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCC-C----HHHHHHHHHhcc------cchHHHHHH
Confidence 99999999999999999999999999999999999999999999986 3 367999998764 478999999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCC-C-------CCCccccCccEEEeeeccccccccccCe
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYGA 229 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~-------~~~~~~~n~~I~l~~~~L~~~~~~~~~~ 229 (507)
+++|+..++.+. .|.|.+.+| ...+|++++|++|++++. + .||+.++||+|+++|+.
T Consensus 161 v~~Av~~v~~~g---~i~i~~~~~-~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~----------- 225 (542)
T PRK00013 161 IAEAMEKVGKEG---VITVEESKG-FETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKK----------- 225 (542)
T ss_pred HHHHHHHhCcCC---cEEEEEcCC-CCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCc-----------
Confidence 999999987543 377777776 778999999999998864 2 35888999999999973
Q ss_pred EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcC------CeEEecCC-----hhhHHHH
Q 010585 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIEHAD-----FDGIERL 298 (507)
Q Consensus 230 ~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~------I~~i~~v~-----~~~L~~i 298 (507)
+++++++. .+++.+.+.++++|+++++|+|.++++|..++ |+++++++ +++|+||
T Consensus 226 ---i~~~~~l~-----------~~l~~i~~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~i 291 (542)
T PRK00013 226 ---ISNIQDLL-----------PVLEQVAQSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDI 291 (542)
T ss_pred ---cCCHHHHH-----------HHHHHHHHhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHH
Confidence 34445543 45788899999999999999999999999997 99999887 7899999
Q ss_pred HHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCCCc-----------------------------
Q 010585 299 ALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQ----------------------------- 344 (507)
Q Consensus 299 a~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~----------------------------- 344 (507)
|.+|||++++ +++++++.++|+|+.+++. .++|++|+++.+++
T Consensus 292 a~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi 368 (542)
T PRK00013 292 AILTGGTVISEELGLKLEDATLEDLGQAKKVVVT---KDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERL 368 (542)
T ss_pred HHHcCCEEecccccCCcccCCHHHCCeeeEEEEe---cCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 9999999999 7899998999999999954 58999999887655
Q ss_pred ------eeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHh
Q 010585 345 ------ACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418 (507)
Q Consensus 345 ------~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL 418 (507)
.+||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|++++.+|+++ ...++++|+++++|++||
T Consensus 369 ~~l~g~~~tI~irG~t~~~l~E~er~i~Dal~~vk~al~~-g~VpGGGa~e~~~s~~L~~~-~~~~~~~~~~i~~~a~Al 446 (542)
T PRK00013 369 AKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEE-GIVPGGGVALLRAAPALEAL-KGLNGDEATGINIVLRAL 446 (542)
T ss_pred HHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc-CcccCcHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999987 69999999999999999988 678899999999999999
Q ss_pred hHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 419 VAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 419 ~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
+.||++|++|||+|+.+++++|+..| ++++|+|+.+|++.||++.|||||+.||.++|+.|+++|++||++|++|..
T Consensus 447 ~~ip~~La~NaG~d~~~vl~~l~~~~---~~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~ 523 (542)
T PRK00013 447 EAPLRQIAENAGLEGSVVVEKVKNGK---GKGYGYNAATGEYVDMIEAGIIDPTKVTRSALQNAASVAGLLLTTEAVVAD 523 (542)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHhhc---CCCEeEeCCCCceeehhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998877 468999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 010585 499 APRR 502 (507)
Q Consensus 499 ~~~~ 502 (507)
+|.+
T Consensus 524 ~~~~ 527 (542)
T PRK00013 524 KPEK 527 (542)
T ss_pred CCcc
Confidence 8754
No 28
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=7e-89 Score=723.68 Aligned_cols=451 Identities=24% Similarity=0.368 Sum_probs=411.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
+|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|++.|| +++|++++|++|++++||||||+
T Consensus 26 ~~i~~~~~la~~v~tTLGP~G~~kmi~~~~--g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~~qd~evGDGTTtv 103 (555)
T PTZ00114 26 SLLKGIERLADAVAVTLGPKGRNVIIEQEY--GSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVASKTNDKAGDGTTTA 103 (555)
T ss_pred HHHHHHHHHHHHHhccCCCCCCcEEEECCC--CCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHHhhccccCCcccHH
Confidence 589999999999999999999999999997 999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
|+|+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++. .++++++|+|+++ .+++++++
T Consensus 104 vvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~------~~~~l~~l 172 (555)
T PTZ00114 104 TILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKT-----KEDILNVATISAN------GDVEIGSL 172 (555)
T ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHHcC------ChHHHHHH
Confidence 999999999999999999999999999999999999999999999863 3679999998753 37889999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCc-eeeeeEEEeecCC-C-------CCCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~-~-------~~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+..++.+.. |.+..|++++|| ++++|++|++++. + .||+.++||+|+++|++|+
T Consensus 173 i~eAv~~vg~~g~-----I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~-------- 239 (555)
T PTZ00114 173 IADAMDKVGKDGT-----ITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKIS-------- 239 (555)
T ss_pred HHHHHHHhCcCCc-----EEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCC--------
Confidence 9999999976542 677799999998 7999999999864 2 2588999999999998775
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcC------CeEEec-----CChhhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIEH-----ADFDGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~------I~~i~~-----v~~~~L~~ 297 (507)
++++ +..+++.+.+.++++++++++|++.++++|..++ |+++++ +++++|+|
T Consensus 240 ------~~~~-----------i~~~le~i~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~ 302 (555)
T PTZ00114 240 ------SIQS-----------ILPILEHAVKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQD 302 (555)
T ss_pred ------CHHH-----------HHHHHHHHHHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHH
Confidence 2233 3345678889999999999999999999999886 999977 66799999
Q ss_pred HHHHhCCeecccc------CCCCCCCccccceEEEEEEcCeEEEEEEccC------------------------------
Q 010585 298 LALVTGGEIASTF------DNPESVKLGHCKLIEEIMIGEDKLIHFSGVE------------------------------ 341 (507)
Q Consensus 298 ia~~tGa~ii~~l------~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~------------------------------ 341 (507)
||.+|||+++++. +++++.++|+|++|++.. +++++++++.
T Consensus 303 la~~tG~~~i~~~~~~~~l~~~~~~~LG~a~~v~~~~---~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~e 379 (555)
T PTZ00114 303 IAVLTGATVVSEDNVGLKLDDFDPSMLGSAKKVTVTK---DETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKE 379 (555)
T ss_pred HHHHhCCEEecccccccCcccCCHHHcCCCceEEEEe---ceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 9999999999997 777778899999999766 5666776655
Q ss_pred -----CCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhh--cCCChhHHHHHHH
Q 010585 342 -----MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR--KTPGKKSHAIEAF 414 (507)
Q Consensus 342 -----~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~--~~~~~~~~~~~~~ 414 (507)
.++++||+|||+|+.+++|++|+++||+++++++++ +++|||||++|+++|.+|++++. ..++++|+++++|
T Consensus 380 R~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Dal~~~k~a~~-~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~~~~i~~~ 458 (555)
T PTZ00114 380 RLAKLSGGVAVIKVGGASEVEVNEKKDRIEDALNATRAAVE-EGIVPGGGVALLRASKLLDKLEEDNELTPDQRTGVKIV 458 (555)
T ss_pred HHHhcCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHh-cCcccCCcHHHHHHHHHHHHHhhccCCchHHHHHHHHH
Confidence 678999999999999999999999999999999998 56999999999999999999876 5789999999999
Q ss_pred HHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhH
Q 010585 415 SRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDE 494 (507)
Q Consensus 415 a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ 494 (507)
++||+.||++|++|||+|+.+++++|+. .+++++|||+.+|++.||++.|||||+.||.++|+.|+|+|++||+||+
T Consensus 459 a~AL~~ip~~La~NaG~d~~~v~~~l~~---~~~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~A~~iL~id~ 535 (555)
T PTZ00114 459 RNALRLPTKQIAENAGVEGAVVVEKILE---KKDPSFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAASVASLMLTTEA 535 (555)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHh---cCCCCEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999976 3567899999999999999999999999999999999999999999999
Q ss_pred hhhcCCCC
Q 010585 495 IITCAPRR 502 (507)
Q Consensus 495 iI~~~~~~ 502 (507)
+|...|..
T Consensus 536 iI~~~~~~ 543 (555)
T PTZ00114 536 AIVDLPKE 543 (555)
T ss_pred HHHhCCcc
Confidence 99998765
No 29
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.1e-88 Score=719.11 Aligned_cols=450 Identities=22% Similarity=0.360 Sum_probs=410.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
.|++|++.++++|+|||||+||+|||+++. |+++|||||+||+++|++.|| +++|++++|++|++++||||||+
T Consensus 15 ~~~~~~~~la~~v~tTlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~GDGTTtv 92 (541)
T PRK12851 15 KMLRGVNILADAVKVTLGPKGRNVVIDKSF--GAPTITNDGVTIAKEIELEDKFENMGAQMVREVASKTNDVAGDGTTTA 92 (541)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCEEEECCC--CCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHhhhHhhCCCccHH
Confidence 478999999999999999999999999997 999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|++.+++.|+++++|++. .+++.++++++. +++++++++
T Consensus 93 viLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~-----~~~l~~va~~s~------~~~~~l~~l 161 (541)
T PRK12851 93 TVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTT-----NAEIAQVATISA------NGDAEIGRL 161 (541)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHhc------cChHHHHHH
Confidence 999999999999999999999999999999999999999999999863 367899987753 578999999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCC--------CCCccccCccEEEeeeccccccccccCe
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYGA 229 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~--------~~~~~~~n~~I~l~~~~L~~~~~~~~~~ 229 (507)
+++|+..++.+. .+.|.... +...++++++|++|++++.+ .||++++||+|+++|++++
T Consensus 162 v~~Av~~vg~~g---~i~i~~~~-~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~--------- 228 (541)
T PRK12851 162 VAEAMEKVGNEG---VITVEESK-TAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKIS--------- 228 (541)
T ss_pred HHHHHHHhcccC---ceEEEEcc-CCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcC---------
Confidence 999999997543 34555544 56788999999999998752 3899999999999997642
Q ss_pred EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCC------eEEec-----CChhhHHHH
Q 010585 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGI------LAIEH-----ADFDGIERL 298 (507)
Q Consensus 230 ~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I------~~i~~-----v~~~~L~~i 298 (507)
+.++ +..+++.+.+.++++|+++++|++.++++|..++| +++++ +++++|+||
T Consensus 229 -----~~~~-----------i~~~l~~i~~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~i 292 (541)
T PRK12851 229 -----NLQD-----------LLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDI 292 (541)
T ss_pred -----cHHH-----------HHHHHHHHHHhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHH
Confidence 1121 45678899999999999999999999999999997 88886 999999999
Q ss_pred HHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCCCc-----------------------------
Q 010585 299 ALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQ----------------------------- 344 (507)
Q Consensus 299 a~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~----------------------------- 344 (507)
|.+|||++++ +++++++.++|+|+.+++.. ++|+++.++.+++
T Consensus 293 a~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri 369 (541)
T PRK12851 293 AILTGGTVISEDLGIKLENVTLEQLGRAKKVVVEK---ENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERL 369 (541)
T ss_pred HHHhCCEEeccCCCCCcCcCCHHHcCCccEEEEEc---ceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999 68888888899999998655 8899998876643
Q ss_pred ------eeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHh
Q 010585 345 ------ACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418 (507)
Q Consensus 345 ------~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL 418 (507)
++||+|||+|+.+++|++|+++||++++++++++ ++|||||++|+++|..|++++.. ++++|+++++|++||
T Consensus 370 ~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~a~~~al~~-g~VpGGGa~e~~~s~~L~~~~~~-~~~~~~~~~~~a~AL 447 (541)
T PRK12851 370 AKLAGGVAVIRVGASTEVEVKEKKDRVDDALHATRAAVEE-GIVPGGGVALLRAVKALDKLETA-NGDQRTGVEIVRRAL 447 (541)
T ss_pred HHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc-CcccCchHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999987 59999999999999999998876 899999999999999
Q ss_pred hHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 419 VAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 419 ~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
+.||++|++|||+|+.+++++|+..| .++|+|+.+|+++||++.|||||+.+|.++|+.|+|+|++||+||++|..
T Consensus 448 ~~ip~~La~NaG~d~~~vl~~l~~~~----~~~G~d~~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~iL~id~iI~~ 523 (541)
T PRK12851 448 EAPVRQIAENAGAEGSVVVGKLREKP----GGYGFNAATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLLLTTEAMVAE 523 (541)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhhC----CCeeeeCCCCCccchhhccCEecHHHHHHHHHHHHHHHHHHHhHHHhhhc
Confidence 99999999999999999999998765 47999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 010585 499 APRR 502 (507)
Q Consensus 499 ~~~~ 502 (507)
+|.+
T Consensus 524 ~~~~ 527 (541)
T PRK12851 524 KPKK 527 (541)
T ss_pred CCCC
Confidence 8764
No 30
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-90 Score=667.23 Aligned_cols=497 Identities=30% Similarity=0.454 Sum_probs=474.9
Q ss_pred CccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHH
Q 010585 1 MASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL 80 (507)
Q Consensus 1 ~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL 80 (507)
.+|++|++++++++++|+||+.|.||+.+.. |.+..||||..||+++++.||+|+-+.+++.+||+++||||||+++|
T Consensus 22 ~~ni~aak~iadvirtclgp~am~kmlld~~--g~i~~tndg~ailrei~Vahpaaksmiel~rtqdeevgdgttsvi~l 99 (527)
T KOG0364|consen 22 LGNIQAAKAIADVIRTCLGPRAMLKMLLDPM--GGIVLTNDGNAILREIDVAHPAAKSMIELSRTQDEEVGDGTTSVIIL 99 (527)
T ss_pred ccchhhHHHHHHHHHHhcChHHHHHHhhccC--CceEEecCcHHHHHHHhhcCcchhhHhhhhhcccccccCCceeeeee
Confidence 3699999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 81 AGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 81 ~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++++|.++..++++|+||..|+++|.+|++.++..++++++|++.++ ...++.+.++++.+|+.+.|++.++++..+
T Consensus 100 agE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~---~~km~~vi~~~v~tk~~~~~~~~~~~lal~ 176 (527)
T KOG0364|consen 100 AGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKD---QAKMLRVINSSVGTKFNSRWSDLICNLALD 176 (527)
T ss_pred hHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCccc---HHHHHhhhhhhhhhhhhhhhcchhhhHHHH
Confidence 99999999999999999999999999999999999999999988764 367899999999999999999999999999
Q ss_pred HHHhhccC----CCc-ccceeeecCCCCCCCceeeeeEEEeecCCC-CCCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 161 AVMRLKGS----TNL-ESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 161 a~~~~~~~----~~~-~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
|+.+++.+ +|+ ++.++.|++||.+++|++++|+.+++++.+ .|.+.++||||++++|+|+|.+.+.. +++.+.
T Consensus 177 avk~V~~~~g~e~dik~y~kveKvpgg~l~~s~vl~Gv~~nkdv~Hpkmrr~IenprivLlD~~LeykkGeSq-tnve~~ 255 (527)
T KOG0364|consen 177 AVKTVGVENGREIDIKRYAKVEKVPGGLLEDSCVLKGVMINKDVTHPKMRRAIENPRIVLLDCPLEYKKGESQ-TNVEIV 255 (527)
T ss_pred HHHHhhhccCceechhhhccccccCcccccccceecceeeccccCcHHHHHHhhcCcEEEecCCccCCCCccc-cceeee
Confidence 99998643 676 489999999999999999999999999754 48999999999999999999998875 778888
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCC
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~ 314 (507)
..++|....+.|++++..++..|+...+++|++.+|++|.+++||-+.||++++|+++.|-.|+++++||+++++.+++.
T Consensus 256 ~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~iT~~rr~rKtDn~ria~acga~iv~rpedl~ 335 (527)
T KOG0364|consen 256 KEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANITAIRRLRKTDNNRIARACGARIVNRPEDLP 335 (527)
T ss_pred echhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCchhhhhhhccccchhhhhcCceeccChhhCc
Confidence 88999998889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc-cceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHH
Q 010585 315 SVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMA 393 (507)
Q Consensus 315 ~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la 393 (507)
+.++|. |+.++..++|+++|+||..|..|+.|||++|||+..+++|.+|.+.||+.+.|+.+.+|+++||||++||.+|
T Consensus 336 e~dvGt~agLf~~kK~gdeyf~f~~~Ck~pkaCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs 415 (527)
T KOG0364|consen 336 ERDVGTGAGLFEVKKIGDEYFTFFTDCKEPKACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVS 415 (527)
T ss_pred hhccCcccceeeeeccCchhhhhhhhcCCCcceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHH
Confidence 999994 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchH
Q 010585 394 KEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFK 473 (507)
Q Consensus 394 ~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~ 473 (507)
+.|++.+....+-+++.+.+.|.||+.+||+|++|||.|++..++.++..|..|...+|+|..+|.+.||.+.++|||..
T Consensus 416 ~~L~qksa~~~GVekwPY~Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~G~~~~gi~g~tg~iVDm~~~~iwep~~ 495 (527)
T KOG0364|consen 416 HELRQKSALMTGVEKWPYGAVAGALEVIPRTLIQNCGANPIRALTALRAKHKEGQRVWGIDGETGVIVDMVELGIWEPEA 495 (527)
T ss_pred HHHHHHHhhccchhccchhhhhcCceeccHHHHhhcCccHHHHHHHHHHHhcCcceeecccCceeeEeeeeeccccchhh
Confidence 99999888889999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcCCCCC
Q 010585 474 VKQAVLLSATEAAEMILRVDEIITCAPRRR 503 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~ 503 (507)
+|.+..++|+|.+++|||||++++....+.
T Consensus 496 vK~Q~~ktavesa~~LLRIddIvsg~kk~v 525 (527)
T KOG0364|consen 496 VKLQTGKTAVESACLLLRIDDIVSGKKKRV 525 (527)
T ss_pred hhhhhhhHHHHHHHHHHhhhceeeeeeecc
Confidence 999999999999999999999998876554
No 31
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.9e-88 Score=712.74 Aligned_cols=444 Identities=25% Similarity=0.372 Sum_probs=406.8
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
.|++||+.++++++|||||+||+|||+++. |+++|||||+||+++|++.|| +++|+++++++|++++||||||+
T Consensus 12 ~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~GDGTTtv 89 (520)
T cd03344 12 ALLRGVNKLADAVKVTLGPKGRNVVIEKSF--GSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKTNDVAGDGTTTA 89 (520)
T ss_pred HHHHHHHHHHHHHhCCcCCCCCcEEEECCC--CCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhhccccCCCcchH
Confidence 589999999999999999999999999997 999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|++ + .++++++++|++++ +++++++
T Consensus 90 viLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~-~----~~~l~~va~ts~~~------~~~l~~l 158 (520)
T cd03344 90 TVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVK-T----KEEIAQVATISANG------DEEIGEL 158 (520)
T ss_pred HHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCC-C----HHHHHHHHHHhcCC------hHHHHHH
Confidence 99999999999999999999999999999999999999999999986 3 46899999998653 7999999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCC-ceeeeeEEEeecCC-CC-------CCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKD-SFLDEGFILDKKIG-IG-------QPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~d-S~l~~Givl~~~~~-~~-------~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+..++.+.. |.+ .+|++.+| +++++|++|++++. +. |+++++||+|+++|++|
T Consensus 159 v~~A~~~v~~~~~---i~v--~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l--------- 224 (520)
T cd03344 159 IAEAMEKVGKDGV---ITV--EEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKI--------- 224 (520)
T ss_pred HHHHHHHhccCCc---EEE--EeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCC---------
Confidence 9999999875432 333 58999988 79999999998864 22 34689999999999875
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCC------eEEecC-----ChhhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGI------LAIEHA-----DFDGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I------~~i~~v-----~~~~L~~ 297 (507)
.+++++. .+++.+.+.++++++++++|++.++++|.+++| +++++. ++++|+|
T Consensus 225 -----~~~~~l~-----------~~l~~i~~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~ 288 (520)
T cd03344 225 -----SSIQELL-----------PILELVAKAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLED 288 (520)
T ss_pred -----CCHHHHH-----------HHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHH
Confidence 3334432 357888999999999999999999999999999 888866 8899999
Q ss_pred HHHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCCC-----------------------------
Q 010585 298 LALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG----------------------------- 343 (507)
Q Consensus 298 ia~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------- 343 (507)
||.+|||++++ ++++++++++|+|+.+++.+ ++|+++.++..+
T Consensus 289 la~~tGa~~~~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR 365 (520)
T cd03344 289 IAILTGGTVISEELGLKLEDVTLEDLGRAKKVVVTK---DDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQER 365 (520)
T ss_pred HHHHhCCEEecccccCCcccCCHHHCCcceEEEEee---ceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999 78888888999999999655 889999888664
Q ss_pred ------ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 344 ------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 344 ------~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
+.+||+|||+|+.+++|++|+++||++++++++++ ++|||||++|++++.+|++++. .++++|+++++|++|
T Consensus 366 ~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~~~k~a~~~-g~VpGGGa~e~~~s~~L~~~~~-~~~~~~~~~~~~a~A 443 (520)
T cd03344 366 LAKLSGGVAVIKVGGATEVELKEKKDRVEDALNATRAAVEE-GIVPGGGVALLRASPALDKLKA-LNGDEKLGIEIVRRA 443 (520)
T ss_pred HHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCcCCcHHHHHHHHHHHHhcc-CChHHHHHHHHHHHH
Confidence 59999999999999999999999999999999987 5999999999999999999988 899999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++++|+..|. ++|+|+.+|++.||++.|||||+.+|.++++.|+|+|++||++|.+|.
T Consensus 444 l~~ip~~La~NaG~d~~~vi~~l~~~~~----~~G~d~~~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~iL~id~~i~ 519 (520)
T cd03344 444 LEAPLRQIAENAGVDGSVVVEKVLESPD----GFGYDAATGEYVDMIEAGIIDPTKVVRSALQNAASVASLLLTTEALVV 519 (520)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhhcC----CEeEECCCCcccchHhccCeecHHHHHHHHHHHHHHHHHHHhhheEEe
Confidence 9999999999999999999999988663 799999999999999999999999999999999999999999999875
No 32
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-88 Score=661.41 Aligned_cols=494 Identities=29% Similarity=0.450 Sum_probs=461.2
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.++++++|+|||+||+||++|+. |+.++|||.+||+++++++||++|||+++++.|+++.||||+++|+|+
T Consensus 30 ~ni~a~~ela~~~rs~yGpng~nK~vvnh~--~k~~~TndaatIlrelev~HPaakllv~a~~~q~~~iGDgtnfvvvla 107 (537)
T KOG0362|consen 30 RNIAAVRELANVIRSAYGPNGRNKMVVNHL--GKTFVTNDAATILRELEVEHPAAKLLVEATQMQEEEIGDGTNFVVVLA 107 (537)
T ss_pred HHHHHHHHHHHHHHhhcCCCCcceeeeccc--ceEEEcCChHHHHHHhhccCcHHHHHHHHHHHHHHhhCCCceEeehhH
Confidence 689999999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||++|.+||..|++|.+|++||+.|.+.+++.|+++.+....+. ++-...++++++||.. .+.+++++++++|
T Consensus 108 ~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~----~d~~~~~rs~i~skq~-~~ed~l~~lVa~a 182 (537)
T KOG0362|consen 108 GALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDL----EDKEWALRSVIMSKQY-GNEDFLTKLVAKA 182 (537)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccc----cChHHHHHHHHHHhhc-chHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999865532221 1122788888888863 4578999999999
Q ss_pred HHhhccC--CCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCHHHH
Q 010585 162 VMRLKGS--TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKA 239 (507)
Q Consensus 162 ~~~~~~~--~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l 239 (507)
...+.+. |+.++|+++++.|+++++|+++.|++|++.. .+.++..+++||++++||++...+++.+ ++.+++++++
T Consensus 183 c~si~p~~~FnvdnIrVcKi~Gg~l~~S~Vv~GmVfkr~~-eG~v~~ak~arvAvf~cP~d~~~TEtkg-TvLi~~A~el 260 (537)
T KOG0362|consen 183 CVSILPLMSFNVDNIRVCKILGGGLEDSCVVCGMVFKRDP-EGEVKSAKDARVAVFACPFDIAQTETKG-TVLLKNAKEL 260 (537)
T ss_pred HHhhcccccccccceEEEEEecCCcccceeeEEEEecccc-CCcccccccceeEEEecCCCcccccCcc-eeeecCcHhh
Confidence 9998766 8899999999999999999999999999875 5666888999999999999999999984 6889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCcc
Q 010585 240 AEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLG 319 (507)
Q Consensus 240 ~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG 319 (507)
..|.+.|+..+...++.|.+.|+++|++.+.+++..++|+++.+|++++--++.||+|+|+..||++++++..+.+..+|
T Consensus 261 ~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhflnky~ImVlqi~Sk~eLrrlcrtvGA~~l~rl~~P~~~~lG 340 (537)
T KOG0362|consen 261 LNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFLNKYKIMVLQINSKFDLRRLCRTVGATALPRLFPPAPEELG 340 (537)
T ss_pred hhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhhccccEEEEEeccHhhHHHHHHHcCCccchhccCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEcCeEEEEEEc-cCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHH
Q 010585 320 HCKLIEEIMIGEDKLIHFSG-VEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDE 398 (507)
Q Consensus 320 ~~~~v~~~~ig~~~~~~~~~-~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~ 398 (507)
+|++|...++|+.+++.|.. +..+++.|++|||++...+|+.||+++|++++.+...++++++||+|++|++|+..|.+
T Consensus 341 ~~d~V~~~EiG~~~v~vF~~e~~~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~ 420 (537)
T KOG0362|consen 341 YCDSVSTQEIGDTLVVVFRWESTGTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISS 420 (537)
T ss_pred ccceeeeeecCCceEEEEeeccCCCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHH
Confidence 99999999999999999983 43568999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCC-cccccccCCcccchHHHHH
Q 010585 399 LARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG-SVGDMAELGISESFKVKQA 477 (507)
Q Consensus 399 ~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g-~~~d~~~~gi~dp~~vk~~ 477 (507)
++..++|-.|++++.|++||+.+|++|++|+|++..++++++...|. +..+.|+|+.-+ ...|+.+.||||-+..|.+
T Consensus 421 ~g~~~~Gl~q~Aik~fa~Ale~~PktlaEnagl~~~evia~ly~~h~-~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~ 499 (537)
T KOG0362|consen 421 RGATLPGLKQLAIKKFAEALEVLPKTLAENAGLAVTEVIAKLYAVHQ-GGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQ 499 (537)
T ss_pred hcccCCCcchhHHHHHHHHhccccHhHHHhcCCcHHHHHHHHHHhhc-CCCcceeeeeccccccChhhhchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887 456689998776 5899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHhhhcCCCCCcC
Q 010585 478 VLLSATEAAEMILRVDEIITCAPRRRED 505 (507)
Q Consensus 478 ~l~~A~e~a~~iL~iD~iI~~~~~~~~~ 505 (507)
+++.|+|+|+++|++|+||+++|...|+
T Consensus 500 a~k~at~aa~tvl~vDqiimak~aggp~ 527 (537)
T KOG0362|consen 500 AIKLATEAALTVLTVDQIIMAKKAGGPK 527 (537)
T ss_pred HHHHHHhhhheeeehhheeEecccCCCC
Confidence 9999999999999999999999875443
No 33
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.3e-87 Score=711.47 Aligned_cols=450 Identities=22% Similarity=0.359 Sum_probs=406.4
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChH----hHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPA----AKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~----~~ll~~~~~~~~~~~GDGttt~ 77 (507)
.|++|++.++++++|||||+||+|||+++. |+++|||||+||+++|++.||+ ++|++++|++|++++||||||+
T Consensus 15 ~~~~~~~~la~~v~tTLGP~G~~kmi~~~~--G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~~qd~e~GDGTTt~ 92 (544)
T PRK12850 15 RLLRGVNILANAVKVTLGPKGRNVVLEKSF--GAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASKTNDLAGDGTTTA 92 (544)
T ss_pred HHHHHHHHHHHHHhCCcCCCCCCEEEECCC--CCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHhhhcchhcCCcchH
Confidence 589999999999999999999999999997 9999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ + .++|+++++++++ .++.++++
T Consensus 93 viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~-~----~~~l~~va~~s~~------~~~~l~~l 161 (544)
T PRK12850 93 TVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVT-S----SKEIAQVATISAN------GDESIGEM 161 (544)
T ss_pred HHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCC-C----HHHHHHHHHHhcC------CHHHHHHH
Confidence 99999999999999999999999999999999999999999999986 3 3679999988744 37899999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCC-C-------CCccccCccEEEeeeccccccccccCe
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-G-------QPKRIENAKILVANTAMDTDKVKIYGA 229 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~-------~~~~~~n~~I~l~~~~L~~~~~~~~~~ 229 (507)
+++|+..++.+..+ +++..+..| .++++++|++|++++.. . ||+.++||+|+++|+.+
T Consensus 162 v~eAv~~vg~~g~i-~v~~~~~~g---~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i---------- 227 (544)
T PRK12850 162 IAEAMDKVGKEGVI-TVEEAKTLG---TELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKI---------- 227 (544)
T ss_pred HHHHHHHhcccCce-eeEEccccC---cceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEeccc----------
Confidence 99999999754321 122222233 68999999999988642 2 48889999999999743
Q ss_pred EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCC------eEEec-----CChhhHHHH
Q 010585 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGI------LAIEH-----ADFDGIERL 298 (507)
Q Consensus 230 ~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I------~~i~~-----v~~~~L~~i 298 (507)
++.++ +..+++.+.+.++++|+++++|+|.++++|..++| +++++ +++++|+||
T Consensus 228 ----~~~~~-----------i~~~l~~i~~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~i 292 (544)
T PRK12850 228 ----SNLQD-----------LLPILEAVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDI 292 (544)
T ss_pred ----CCHHH-----------HHHHHHHHHHhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHH
Confidence 22222 55678889999999999999999999999999999 99887 889999999
Q ss_pred HHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCCC------------------------------
Q 010585 299 ALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG------------------------------ 343 (507)
Q Consensus 299 a~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~------------------------------ 343 (507)
|.+|||++++ +++++++.++|+|+.+++.. ++|++|.++..+
T Consensus 293 a~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~ 369 (544)
T PRK12850 293 AVLTGGQVISEDLGIKLENVTLDMLGRAKRVLITK---ENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERL 369 (544)
T ss_pred HHHhCCEEeccccCCCcccCCHHHcCCCcEEEEEe---eeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999999999 68888888999999998554 889999988764
Q ss_pred -----ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHh
Q 010585 344 -----QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418 (507)
Q Consensus 344 -----~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL 418 (507)
+++||+|||+|+.+++|++|+++||++++++++++ ++|||||++|++++..|+++ ...++++|+++++|++||
T Consensus 370 ~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~~~k~a~~~-g~VpGGGa~e~~~s~~L~~~-~~~~~~~~~~i~~~a~Al 447 (544)
T PRK12850 370 AKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEE-GIVPGGGVALLRARSALRGL-KGANADETAGIDIVRRAL 447 (544)
T ss_pred HHhcCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCcHHHHHHHHHHHhc-cCCChHHHHHHHHHHHHH
Confidence 38999999999999999999999999999999987 69999999999999999988 677899999999999999
Q ss_pred hHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 419 VAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 419 ~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
+.||++|++|||+|+.+++.+|+..| .++|+|+.+|++.||++.|||||+.||.++|+.|+|+|++||++|++|..
T Consensus 448 ~~ip~~La~NaG~d~~~v~~~l~~~~----~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~ 523 (544)
T PRK12850 448 EEPLRQIATNAGFEGSVVVGKVAELP----GNFGFNAQTGEYGDMVEAGIIDPAKVTRTALQDAASIAALLITTEAMVAE 523 (544)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhhC----CCcceeCCCCcccchhhccCcccHHHHHHHHHHHHHHHHHHHhHHHhhcc
Confidence 99999999999999999999998764 46899999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 010585 499 APRR 502 (507)
Q Consensus 499 ~~~~ 502 (507)
+|..
T Consensus 524 ~~~~ 527 (544)
T PRK12850 524 APKK 527 (544)
T ss_pred CCCC
Confidence 8764
No 34
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-89 Score=667.03 Aligned_cols=496 Identities=39% Similarity=0.570 Sum_probs=463.9
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
.|.-|+.+++++|+|||||-|++||++++. |++.+||||+|||+.+.++||++|+|++.++.|++++|||||++++++
T Consensus 23 qnv~a~~~i~nivkss~GPvGldKmlvdd~--Gdvt~TndgAtiL~~l~V~HPa~KiLvelaq~qd~evgDgttsvviia 100 (545)
T KOG0360|consen 23 QNVMAAMAIANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILSLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIA 100 (545)
T ss_pred hhhHHHHHHHHHHHhccCccchhhhccccc--cceEEeccHHHHHHhhhhcchHHHHHHHHHHhccccccCCceEEEEEE
Confidence 478899999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~-~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++|++++.+|+..++||+.+++||+.|+..+++++.+ ++.|++.- ..+.|.++++|+++||+.....++|++++++
T Consensus 101 ~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~l---g~~~Lin~~ktsmsSK~i~~ds~~f~~~Vvd 177 (545)
T KOG0360|consen 101 AELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSL---GTQILINLAKTSMSSKIIGMDSDFFTEMVVD 177 (545)
T ss_pred HHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhc---chHHHHHHHHhhhcceecccchHHHHHHHHH
Confidence 9999999999999999999999999999999999965 56666543 2578999999999999999999999999999
Q ss_pred HHHhhc-------cCCCcccceeeecCCCCCCCceeeeeEEEeecC-CCCCCccccCccEEEeeeccccccccccCeEEE
Q 010585 161 AVMRLK-------GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVR 232 (507)
Q Consensus 161 a~~~~~-------~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~-~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~ 232 (507)
|+..+. +...++.++|.+.+|.+.-+|.+++|+.++... +..||..++|+||+++++.|...+... |..+.
T Consensus 178 a~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS~l~~GyaLnc~~asq~m~~~i~~~Kiacld~~Lqk~km~l-Gv~vv 256 (545)
T KOG0360|consen 178 ALLAVKILDINGEPHYPINSVNILKAHGKSQIESMLLPGYALNCSVASQMMPLRIKNAKIACLDFTLQKTKMKL-GVQVV 256 (545)
T ss_pred HHHHHhhcccCCceeccccceeEEecCCccchhheeecceeeeccHhhhccccccccceeeeEecccccccccc-cceEE
Confidence 998762 123467899999999999999999999999885 467899999999999999998877665 57889
Q ss_pred EcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccC-
Q 010585 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFD- 311 (507)
Q Consensus 233 i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~- 311 (507)
+.++++++.+.+.|....++.+++|++.++|+|+++++|||..+.||.++|++++||+.+++|++|+++||+++++++.
T Consensus 257 v~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~veagamAVrR~~k~dlk~iakatGat~~sSla~ 336 (545)
T KOG0360|consen 257 VDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEAGAMAVRRCKKEDLKRIAKATGATLLSSLAN 336 (545)
T ss_pred EcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHcchhhhHHHHHHHHHHHHHhhCCeeeehhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred -----CCCCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCC
Q 010585 312 -----NPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 386 (507)
Q Consensus 312 -----~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG 386 (507)
.+++..+|+|+.|.+.+|+++.++++.+.+.. .++|+|||++++.++|++|++|||++++|..++.+.+|||||
T Consensus 337 l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka~-~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG 415 (545)
T KOG0360|consen 337 LEGEETFEPASLGSADEVVQERIGDDELILIKGTKAT-SASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGG 415 (545)
T ss_pred cccccccChhhccchhHHHHHhcccceeEEeccCccc-eeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCcc
Confidence 45566799999999999999999999998766 999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHc--C------CCceeEEcCCC
Q 010585 387 WPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK--E------GCPAGIDVISG 458 (507)
Q Consensus 387 ~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~--~------~~~~G~d~~~g 458 (507)
|+|.+|+.+|++++.+.++++|+++..|+.||..||++|+.|++.|+.+.++++++.|+. . ..|+|+|+.+|
T Consensus 416 ~vE~aLs~yle~~a~s~~srE~laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng 495 (545)
T KOG0360|consen 416 AVETALSIYLENFATSVGSREQLAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLING 495 (545)
T ss_pred HHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhccCCccccchhhCcccccc
Confidence 999999999999999999999999999999999999999999999999999999998852 1 24899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCCCCc
Q 010585 459 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 504 (507)
Q Consensus 459 ~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~ 504 (507)
++.|.++.|+++|..+|...|+.|+|.+..+||+|++|.-.|+.+.
T Consensus 496 ~~~dn~~~g~~ep~~~kvksLk~ateaaitiLriD~li~l~~~~~~ 541 (545)
T KOG0360|consen 496 KIRDNKSAGSFEPPIVKVKSLKFATEAAITILRIDDLIKLLPELQV 541 (545)
T ss_pred EeecceeeeeeccceeehhhhHHHHHhhhhhcchhhhhhcCccccc
Confidence 9999999999999999999999999999999999999998887653
No 35
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=2.6e-87 Score=711.10 Aligned_cols=450 Identities=21% Similarity=0.339 Sum_probs=406.8
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccc----cChHhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHI----DNPAAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~----~hP~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
.|++|+..++++|+|||||+||+|||+++. |+++|||||+||+++|++ +||+++|++++|++|++++||||||+
T Consensus 15 ~~~~~~~~la~~v~tTLGP~G~~kmi~~~~--g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~q~~e~GDGTTtv 92 (545)
T PRK12852 15 RMLRGVDILANAVKVTLGPKGRNVVIEKSF--GAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDLAGDGTTTA 92 (545)
T ss_pred HHHHHHHHHHHHHhcccCCCCCCEEEECCC--CCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhhcCceecCCcchH
Confidence 489999999999999999999999999997 999999999999999999 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|++.+++.|+++++|++.+ +++.++++++.+ .++.++++
T Consensus 93 vvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~-----~~l~~va~~s~~------~~~~l~~l 161 (545)
T PRK12852 93 TVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASS-----AEIAQVGTISAN------GDAAIGKM 161 (545)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH-----HHHHHHHhhhcC------ChHHHHHH
Confidence 9999999999999999999999999999999999999999999998643 568999887653 37899999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCC-CCceeeeeEEEeecCCC--------CCCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSL-KDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~-~dS~l~~Givl~~~~~~--------~~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+..++.+.. |.+. .|+.. .++++++|++|++++.. .|+..++||+|+++++.
T Consensus 162 i~eA~~~vg~~g~---i~v~--~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~---------- 226 (545)
T PRK12852 162 IAQAMQKVGNEGV---ITVE--ENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKK---------- 226 (545)
T ss_pred HHHHHHHhccCCc---eeee--cCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCc----------
Confidence 9999999976542 3333 47765 79999999999998742 37888999999999752
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHc------CCeEEecCC-----hhhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHAD-----FDGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~------~I~~i~~v~-----~~~L~~ 297 (507)
+.+.+ .+..+++.+.+.++++|+++++|++.++++|..+ +|+++++.+ +++|+|
T Consensus 227 ----i~~~~-----------~i~~~l~~i~~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ 291 (545)
T PRK12852 227 ----LSGLQ-----------AMLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLED 291 (545)
T ss_pred ----cCCHH-----------HHHHHHHHHHHhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHH
Confidence 23332 3445678889999999999999999999999876 799999766 889999
Q ss_pred HHHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCC------------------------------
Q 010585 298 LALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM------------------------------ 342 (507)
Q Consensus 298 ia~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~------------------------------ 342 (507)
||.+|||++++ +++++++.++|+|+.+++.. ++++++.++..
T Consensus 292 ia~~tGa~~i~~~~~~~l~~~~~~~lG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R 368 (545)
T PRK12852 292 IAILTGGQLISEDLGIKLENVTLKMLGRAKKVVIDK---ENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQER 368 (545)
T ss_pred HHHhcCCEEEecCcCCCcCCCCHHHCCCCcEEEEEc---cEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 99999999999 68888888999999998555 78899988765
Q ss_pred -----CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 343 -----GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 343 -----~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
++++||+|||+|+.+++|++|+++||++++++++++ ++|||||++|++++.+|++++.. ++++|+++++|++|
T Consensus 369 ~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~a~~~a~~~-g~VpGGGa~e~~~s~~L~~~~~~-~~~~q~~i~~~a~A 446 (545)
T PRK12852 369 LAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQE-GIVPGGGVALLRAKKAVGRINND-NADVQAGINIVLKA 446 (545)
T ss_pred HHHhCCCeEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcCchHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHH
Confidence 378999999999999999999999999999999987 69999999999999999998877 78999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++++|+..| ++++|||+.+|++.||++.|||||+.+|.++|+.|+|+|++||++|++|.
T Consensus 447 L~~ip~~La~NaG~d~~~vl~~l~~~~---~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~iI~ 523 (545)
T PRK12852 447 LEAPIRQIAENAGVEGSIVVGKILENK---SETFGFDAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVA 523 (545)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999998776 46899999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 010585 498 CAPRR 502 (507)
Q Consensus 498 ~~~~~ 502 (507)
.+|.+
T Consensus 524 ~~~~~ 528 (545)
T PRK12852 524 ELPKK 528 (545)
T ss_pred cCCCC
Confidence 88765
No 36
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=5.2e-87 Score=705.60 Aligned_cols=447 Identities=24% Similarity=0.362 Sum_probs=404.3
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
.|++|++.++++++|||||+||+|||+++. |+++|||||+||+++|++.|| +++|++++|++|++++||||||+
T Consensus 13 ~~~~~~~~la~~v~ttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~GDGTTtv 90 (524)
T TIGR02348 13 ALLRGVDKLADAVKVTLGPKGRNVVLEKSF--GAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKTNDVAGDGTTTA 90 (524)
T ss_pred HHHHHHHHHHHHhccCcCCCCCcEEEECCC--CCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHccCceeCCCcchH
Confidence 589999999999999999999999999997 999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ + .+.++++++|+. +++++++++
T Consensus 91 viLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~-~----~~~l~~va~ts~------~~~~~l~~l 159 (524)
T TIGR02348 91 TVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVK-G----KKEIAQVATISA------NNDEEIGSL 159 (524)
T ss_pred HHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCC-C----HHHHHHHHHHhc------cChHHHHHH
Confidence 99999999999999999999999999999999999999999999986 3 468999998764 468999999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCC-CCceeeeeEEEeecCC-CC-------CCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSL-KDSFLDEGFILDKKIG-IG-------QPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~-~dS~l~~Givl~~~~~-~~-------~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+..++.+.. |.|. .|+.. ++|++++|++|++++. +. |++.++||+|+++++.+
T Consensus 160 v~~A~~~v~~~~~---i~v~--~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i--------- 225 (524)
T TIGR02348 160 IAEAMEKVGKDGV---ITVE--ESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKI--------- 225 (524)
T ss_pred HHHHHHHhCcCCc---Eeee--cCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCc---------
Confidence 9999999876543 3343 35665 6799999999999874 22 47889999999998743
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHc------CCeEEecCCh-----hhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHADF-----DGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~------~I~~i~~v~~-----~~L~~ 297 (507)
.+++++ ..+++.+.+.++++|+++++|++.++++|..+ +|++++++++ ++|+|
T Consensus 226 -----~~~~~i-----------~~~l~~i~~~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ 289 (524)
T TIGR02348 226 -----SNIKDL-----------LPLLEKVAQSGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLED 289 (524)
T ss_pred -----CCHHHH-----------HHHHHHHHHhCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHH
Confidence 334443 45678899999999999999999999999887 8999998865 79999
Q ss_pred HHHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCCCc----------------------------
Q 010585 298 LALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQ---------------------------- 344 (507)
Q Consensus 298 ia~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~---------------------------- 344 (507)
||.+|||++++ +++++++.++|+|+.+++. .++++++.++..++
T Consensus 290 ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR 366 (524)
T TIGR02348 290 IAILTGGQVISEELGLKLEEVTLDDLGKAKKVTVD---KDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQER 366 (524)
T ss_pred HHHHhCCEEecccccCCcCcCCHHHCCCceEEEEe---ecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999 8999999999999999854 48889998876543
Q ss_pred -------eeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 345 -------ACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 345 -------~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
++||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|++++.+|++ +...++++++++++|++|
T Consensus 367 ~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~~~r~a~~~-g~VpGGGa~e~~~s~~L~~-~~~~~~~~~~~~~~~a~A 444 (524)
T TIGR02348 367 LAKLAGGVAVIKVGAATETEMKEKKLRVEDALNATRAAVEE-GIVPGGGVALLRAAAALEG-LKGDNEDEAIGIDIVKRA 444 (524)
T ss_pred HHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCcHHHHHHHHHHHH-hccCChHHHHHHHHHHHH
Confidence 6899999999999999999999999999999987 5999999999999999998 777889999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++++|+.. .+ ++|||+.+|++.||++.|||||+.||.++|+.|+++|++||++|++|.
T Consensus 445 L~~ip~~La~NaG~d~~~v~~~l~~~--~~--~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~ii~ 520 (524)
T TIGR02348 445 LEAPLRQIAENAGKDGAVVAEKVKES--KG--NFGFNAATGEYEDLVEAGIIDPTKVTRSALQNAASIAGLLLTTEAVVA 520 (524)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhc--CC--CeeEeCcCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999999764 22 489999999999999999999999999999999999999999999998
Q ss_pred cCC
Q 010585 498 CAP 500 (507)
Q Consensus 498 ~~~ 500 (507)
..|
T Consensus 521 ~~~ 523 (524)
T TIGR02348 521 DKP 523 (524)
T ss_pred cCC
Confidence 754
No 37
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=1.2e-85 Score=696.08 Aligned_cols=449 Identities=21% Similarity=0.314 Sum_probs=396.7
Q ss_pred HHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhH----HHHHHHhhcccccCCCchHHHH
Q 010585 4 FVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAK----VLVDISKVQDDEVGDGTTSVVV 79 (507)
Q Consensus 4 ~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~----ll~~~~~~~~~~~GDGttt~vl 79 (507)
++||..++++|+|||||+||+|||+++. |+++|||||+||+++|+++||+++ |+++++++|++++||||||+++
T Consensus 16 ~~g~~~la~~v~tTlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~~~~e~GDGTTtvvv 93 (529)
T CHL00093 16 ERGMDILAEAVSVTLGPKGRNVVLEKKY--GSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATV 93 (529)
T ss_pred HHHHHHHHHHHhcccCCCCCcEEEECCC--CCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHhcCceecCCCCHHHH
Confidence 6899999999999999999999999987 999999999999999999999995 8888999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 80 LAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 80 L~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
|+++||++|.+++++|+||..|++||+.|.+.+++.|+++++|++ + .++|.+++++++ ++++.|+++++
T Consensus 94 La~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~-d----~~~L~~VA~ts~------~~~~~l~~lv~ 162 (529)
T CHL00093 94 LAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVE-D----IQAITQVASISA------GNDEEVGSMIA 162 (529)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCC-C----HHHHHHHHHHhc------cChHHHHHHHH
Confidence 999999999999999999999999999999999999999999987 3 467999998864 37899999999
Q ss_pred HHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCC-CC---CCc----cccCccEEEeeeccccccccccCeEE
Q 010585 160 DAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IG---QPK----RIENAKILVANTAMDTDKVKIYGARV 231 (507)
Q Consensus 160 ~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~---~~~----~~~n~~I~l~~~~L~~~~~~~~~~~~ 231 (507)
+|+..++++.. |.+. -.+++..++++++|++|++++. +. +|+ +++||+|++++++|++.+
T Consensus 163 eAv~~vg~~g~---i~~~-~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~-------- 230 (529)
T CHL00093 163 DAIEKVGREGV---ISLE-EGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQ-------- 230 (529)
T ss_pred HHHHHhccCCc---eeec-CCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchH--------
Confidence 99999976542 2231 1233456789999999999874 22 233 599999999999987532
Q ss_pred EEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHH--HHHHH----cCCeEEecCCh-----hhHHHHHH
Q 010585 232 RVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPE--ELFAD----AGILAIEHADF-----DGIERLAL 300 (507)
Q Consensus 232 ~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~--~~l~~----~~I~~i~~v~~-----~~L~~ia~ 300 (507)
..+...++.+.+.++++++++++|++.++ .++++ .+|+++++++. ++|+|||.
T Consensus 231 ----------------~~i~~~l~~i~~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~ 294 (529)
T CHL00093 231 ----------------QDLLPILEQVTKTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAI 294 (529)
T ss_pred ----------------HHHHHHHHHHHhcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHH
Confidence 11455678888999999999999998544 45577 59999999855 78999999
Q ss_pred HhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEc---------cCC------------------------
Q 010585 301 VTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSG---------VEM------------------------ 342 (507)
Q Consensus 301 ~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~---------~~~------------------------ 342 (507)
+|||++++ +++++++.++|+|+.+++. .+++++|++ |..
T Consensus 295 ~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l 371 (529)
T CHL00093 295 LTGGQVITEDAGLSLETIQLDLLGQARRIIVT---KDSTTIIADGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKL 371 (529)
T ss_pred hhCCEEecccccCCcCCCCHHHCCcceEEEEe---cCEEEEEecCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHh
Confidence 99999999 6889988899999999955 378888873 222
Q ss_pred -CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhh-cCCChhHHHHHHHHHHhhH
Q 010585 343 -GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR-KTPGKKSHAIEAFSRALVA 420 (507)
Q Consensus 343 -~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~-~~~~~~~~~~~~~a~aL~~ 420 (507)
+..+||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|+++|..|++++. ..++++|+++++|++||+.
T Consensus 372 ~g~~~~I~irg~t~~~l~E~er~i~DAl~a~r~a~~~-gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~~~i~~~a~AL~~ 450 (529)
T CHL00093 372 SGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEE-GIVPGGGATLVHLSENLKTWAKNNLKEDELIGALIVARAILA 450 (529)
T ss_pred cCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHHc-CcccCCcHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHH
Confidence 148889999999999999999999999999999987 5999999999999999999987 7899999999999999999
Q ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCC
Q 010585 421 IPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 500 (507)
Q Consensus 421 ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~ 500 (507)
||++|++|||+|+.+++++++.. +.++|||+.+|+++||++.|||||+.||.++|+.|+|+|++||+||++|..+|
T Consensus 451 ip~~La~NaG~d~~~v~~~l~~~----~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~ii~~~~ 526 (529)
T CHL00093 451 PLKRIAENAGKNGSVIIEKVQEQ----DFEIGYNAANNKFVNMYEAGIIDPAKVTRSALQNAASIASMILTTECIIVDKK 526 (529)
T ss_pred HHHHHHHhcCCCHHHHHHHHHcc----CCCEeEECCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999653 45899999999999999999999999999999999999999999999999876
Q ss_pred C
Q 010585 501 R 501 (507)
Q Consensus 501 ~ 501 (507)
+
T Consensus 527 ~ 527 (529)
T CHL00093 527 E 527 (529)
T ss_pred C
Confidence 4
No 38
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=5e-85 Score=691.23 Aligned_cols=450 Identities=22% Similarity=0.362 Sum_probs=404.3
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhcccc----ChHhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHID----NPAAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~----hP~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
.|++|+..++++|++||||+||+|||+++. |+++|||||+||+++|++. ||+++|++++|++|++++||||||+
T Consensus 15 ~~~~~~~~la~~v~tTLGP~G~~k~i~~~~--g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~qd~e~GDGTTTv 92 (546)
T PRK14104 15 RMLRGVDILANAVKVTLGPKGRNVVLDKSF--GAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTA 92 (546)
T ss_pred HHHHHHHHHHHHHhhccCCCCCceEEEcCC--CCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHhhcccccCcccHH
Confidence 489999999999999999999999999986 9999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++.+ +++.++++++.+ +++.++++
T Consensus 93 vvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~-----~~l~~va~~s~~------~d~~i~~l 161 (546)
T PRK14104 93 TVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSN-----DEIAQVGTISAN------GDAEIGKF 161 (546)
T ss_pred HHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCH-----HHHHHHHHHHhc------CchHHHHH
Confidence 9999999999999999999999999999999999999999999998643 568899887644 45889999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCC-CCceeeeeEEEeecCC-C-------CCCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSL-KDSFLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~-~dS~l~~Givl~~~~~-~-------~~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+..++.+. .|.+. .++.. .++++++|++|++++. + .++.++++|+|++++.
T Consensus 162 v~~Av~~vg~~g---~i~v~--~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~----------- 225 (546)
T PRK14104 162 LADAMKKVGNEG---VITVE--EAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEK----------- 225 (546)
T ss_pred HHHHHHHhccCC---ceeeE--ecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehh-----------
Confidence 999999997654 23343 23455 5899999999999874 2 2367788999999872
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHH------cCCeEEecCC-----hhhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~------~~I~~i~~v~-----~~~L~~ 297 (507)
.++++++ +..+++.+.+.+++||+++++|++.++++|.. .+|+++++++ +++|+|
T Consensus 226 ---~i~~~~~-----------i~~~l~~i~~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ 291 (546)
T PRK14104 226 ---KLSSLNE-----------LLPLLEAVVQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQD 291 (546)
T ss_pred ---hhcCHHH-----------HHHHHHHHHHhCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHH
Confidence 1344433 44568889999999999999999999999985 5789998877 789999
Q ss_pred HHHHhCCeeccc-----cCCCCCCCccccceEEEEEEcCeEEEEEEccCCC-----------------------------
Q 010585 298 LALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG----------------------------- 343 (507)
Q Consensus 298 ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------- 343 (507)
||.+|||+++++ ++++++.++|+|+.++ +++++++++.+|..+
T Consensus 292 ia~~tG~~~i~~~~~~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR 368 (546)
T PRK14104 292 IAILTGGQAISEDLGIKLENVTLQMLGRAKKVM---IDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQER 368 (546)
T ss_pred HHHHhCCEEEecCCCCCcCcCCHHHCCceeEEE---EcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 999999999999 8888888999999988 688999999988764
Q ss_pred ------ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 344 ------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 344 ------~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
+++||+|||+|+.+++|++|+++||++++++++++ ++|||||++|++++..|+++. ..++++++++++|++|
T Consensus 369 i~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~a~~~ai~~-g~VpGGGa~e~~~s~~L~~~~-~~~~~~~~~i~~~a~A 446 (546)
T PRK14104 369 LAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEE-GIVPGGGVALLRASEQLKGIK-TKNDDQKTGVEIVRKA 446 (546)
T ss_pred HHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc-CcCcCchHHHHHHHHHHHHhh-cCChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999987 599999999999999999874 3578999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++.+|+..| .+++|+|+.+|++.||++.|||||+.||.++|+.|+++|++||++|++|.
T Consensus 447 l~~ip~~La~NaG~d~~~v~~~l~~~~---~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~iL~id~~I~ 523 (546)
T PRK14104 447 LSAPARQIAINAGEDGSVIVGKILEKE---QYSYGFDSQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAMVA 523 (546)
T ss_pred HHhhHHHHHHhCCCCHHHHHHHHHhcC---CCcEeEeCCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999997643 46799999999999999999999999999999999999999999999998
Q ss_pred cCCCC
Q 010585 498 CAPRR 502 (507)
Q Consensus 498 ~~~~~ 502 (507)
..|++
T Consensus 524 ~~~~~ 528 (546)
T PRK14104 524 ELPKK 528 (546)
T ss_pred cCCcC
Confidence 88754
No 39
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=8.9e-85 Score=692.58 Aligned_cols=451 Identities=22% Similarity=0.344 Sum_probs=401.9
Q ss_pred HHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHHHH
Q 010585 4 FVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSVVV 79 (507)
Q Consensus 4 ~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~vl 79 (507)
++||+.|+++|++||||+||+|||+++. |+++|||||+||+|+|++.|| +++|++++|++|++++||||||+++
T Consensus 72 ~~g~~~la~~vktTLGP~G~~kmi~~~~--G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~evGDGTTTvvV 149 (600)
T PLN03167 72 QAGVNKLADLVGVTLGPKGRNVVLESKY--GSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVV 149 (600)
T ss_pred HHHHHHHHHHHhccCCCCCCCEEEECCC--CCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhhhhhhCCCccHHHH
Confidence 6799999999999999999999999997 999999999999999999999 5999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 80 LAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 80 L~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
|+++||+++.+++++|+||..|++||+.|.+.+++.|++++.|++ + ++|.+++.++. ++++.|+++++
T Consensus 150 La~~LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~-d-----~~L~~vA~tS~------~~~~~i~~lia 217 (600)
T PLN03167 150 LAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVE-D-----SELADVAAVSA------GNNYEVGNMIA 217 (600)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC-H-----HHHHHHHHHhc------cCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999885 2 46999998875 45779999999
Q ss_pred HHHHhhccCCCcccceeeecCCCCCCCc-eeeeeEEEeecCC-C-------CCCccccCccEEEeeeccccccccccCeE
Q 010585 160 DAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYGAR 230 (507)
Q Consensus 160 ~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~-~-------~~~~~~~n~~I~l~~~~L~~~~~~~~~~~ 230 (507)
+|+.++++++. |...+|++.+|+ ++++|++|+++|. + +|+++++||+|+++++.
T Consensus 218 eAv~~Vg~~g~-----i~v~~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~------------ 280 (600)
T PLN03167 218 EAMSKVGRKGV-----VTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKK------------ 280 (600)
T ss_pred HHHHHhccCCc-----EEeccCCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccc------------
Confidence 99999976542 233478999997 9999999999974 3 57899999999999852
Q ss_pred EEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHH------HcCCeEEecCC-----hhhHHHHH
Q 010585 231 VRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFA------DAGILAIEHAD-----FDGIERLA 299 (507)
Q Consensus 231 ~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~------~~~I~~i~~v~-----~~~L~~ia 299 (507)
+++.+++.++. +.+.+.++++++++++|++.++++|. ..+|+++++.+ +++|+|||
T Consensus 281 --i~~~~~l~~~l-----------e~i~~~g~~lvI~a~~I~~~aL~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia 347 (600)
T PLN03167 281 --ITNARDLIGIL-----------EDAIRGGYPLLIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIA 347 (600)
T ss_pred --cCCHHHHHHHH-----------HHHHHhCcCEEEEcCCCCHHHHHHHHHhhccccceEEEEEcccCCcchHHHHHHHH
Confidence 45666666543 35566789999999999999999998 78899999986 78999999
Q ss_pred HHhCCeecc-----ccCCCCCCCccccceEEEEE-----EcC--------eEEEEEEccC------------C------C
Q 010585 300 LVTGGEIAS-----TFDNPESVKLGHCKLIEEIM-----IGE--------DKLIHFSGVE------------M------G 343 (507)
Q Consensus 300 ~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~-----ig~--------~~~~~~~~~~------------~------~ 343 (507)
.+|||++++ +++++++.++|+|+.|++.+ +|+ +++.+|+++. . +
T Consensus 348 ~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~ 427 (600)
T PLN03167 348 ILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLS 427 (600)
T ss_pred HhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcC
Confidence 999999999 67888888999999999876 776 4777776643 0 1
Q ss_pred ceeEE-EecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHH-HHHHHHHHhhHh
Q 010585 344 QACTI-VLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSH-AIEAFSRALVAI 421 (507)
Q Consensus 344 ~~~Ti-ll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~-~~~~~a~aL~~i 421 (507)
+.+|+ +|||+|+.+++|++|+++||++++|++++++ +|||||++|++++.+|++++...++++|+ +++++++||+.|
T Consensus 428 g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p 506 (600)
T PLN03167 428 GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLASKVDAIKDTLENDEQKVGADIVKRALSYP 506 (600)
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcc
Confidence 23455 5999999999999999999999999999877 99999999999999999988887787775 599999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCC
Q 010585 422 PTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPR 501 (507)
Q Consensus 422 p~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~ 501 (507)
|++|++|||+|+.+++.+|+.. +++++|||..+|++.||++.|||||+.||+++|+.|+++|++||++|++|..+|.
T Consensus 507 ~r~La~NAG~d~~~vv~~L~~~---~~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~~A~~~A~~iL~iD~iI~~~~~ 583 (600)
T PLN03167 507 LKLIAKNAGVNGSVVSEKVLSN---DNPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDCVVVEIKE 583 (600)
T ss_pred hhhhhhcCCCCHHHHHHHHHhc---CCCCEeEeCCCCcCcchHhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999743 3678999999999999999999999999999999999999999999999998754
Q ss_pred C
Q 010585 502 R 502 (507)
Q Consensus 502 ~ 502 (507)
.
T Consensus 584 ~ 584 (600)
T PLN03167 584 P 584 (600)
T ss_pred C
Confidence 3
No 40
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-83 Score=614.32 Aligned_cols=487 Identities=29% Similarity=0.480 Sum_probs=463.1
Q ss_pred cHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHHH
Q 010585 3 SFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAG 82 (507)
Q Consensus 3 n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~~ 82 (507)
|+.++..+.+++++.+||+|..||++++. |++.+|+||.+.+.+|.+.||.+-++..++..|++..||||||+|+|++
T Consensus 22 Nis~AigLqsV~~snlgPkgt~Kmlvsga--gdIklakdgnvLl~emQiqhPTa~lIakaatAqdd~tGDGttS~Vllig 99 (520)
T KOG0359|consen 22 NISAAIGLQSVLVLNLGPKGTEKMLVSGA--GDIKLAKDGNVLLKEMQIQHPTASLIAKVATAQDDITGDGTTSVVLLIG 99 (520)
T ss_pred ccccccceeeeehhccCchhHHHhccCCc--cceEEEecchhhHHHHhhcCchHHHHHHHHHHhhcccCCCcceEEEeeH
Confidence 78888899999999999999999999997 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHHH
Q 010585 83 ELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAV 162 (507)
Q Consensus 83 ~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a~ 162 (507)
+|+++|...+..|+||..|++||+.|.+.++++|+..+.+++ ++.|..+++|++.+|+...-.+.++.++++|+
T Consensus 100 Ellkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~------~~~L~~va~tsl~Tkv~~~la~~lt~~vv~aV 173 (520)
T KOG0359|consen 100 ELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVD------RETLKDVARTSLRTKVHAELADVLTPIVVDSV 173 (520)
T ss_pred HHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchh------HHHHHHHHHHhhcCcccHHHHhHhHHHHHhhh
Confidence 999999999999999999999999999999999996665554 57899999999999999888999999999999
Q ss_pred Hhhc---cCCCcccceeeecCCCCCCCceeeeeEEEeecC-CCCCCccccCccEEEeeeccccccccccCeEEEEcCHHH
Q 010585 163 MRLK---GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSK 238 (507)
Q Consensus 163 ~~~~---~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~-~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~ 238 (507)
..+. +.+|+.+++|.+....+..|+.+++|++++++. ++.||+.++|+.|+++|-+|||++++.+ +.+-+++.+|
T Consensus 174 l~i~~~~~~idl~mveim~mq~~s~~dT~~v~glvLdhg~rHpdmp~~~e~a~iL~~NvSLEYEK~Ein-sgffYsta~e 252 (520)
T KOG0359|consen 174 LCIRRQEEPIDLFMVEIMEMQHKSLHDTSLVQGLVLDHGARHPDMPRRVEDAYILICNVSLEYEKPEIN-SGFFYSTAEE 252 (520)
T ss_pred eeeccCCCCcchhHHHhhhhccCchhhhHHhhhhhccCCCCCcccccchhceEEEEeeccccccccccc-cchhccchhH
Confidence 9875 247888999999999999999999999999985 4789999999999999999999999986 6788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC----eEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCC
Q 010585 239 AAEIEGAEKQKMREKVQKIIAHGI----NCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 239 l~~l~~~e~~~l~~~~~~i~~~~v----~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~ 314 (507)
.+.+...|++++.+.+++|++++- -+|++|+||||..++.|++.||+++||.++++|||+..+||+..++++++++
T Consensus 253 re~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~gIlaLRRAKRRNmERL~lacGG~a~nsvddLt 332 (520)
T KOG0359|consen 253 REVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKSGILALRRAKRRNMERLVLACGGEAVNSVDDLT 332 (520)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhcchHHHHHHhhhhHHHHHHhhccceecccccCC
Confidence 999999999999999999998762 4778999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 315 SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 315 ~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
+..+|+|+.|.+.++|+++|+|+++|++|++|||+++||+.+.+.+++++++|++++++++++++.++||+|++|..+++
T Consensus 333 p~~LG~aglVye~tlGEEkfTFIE~~~~p~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i~Gaga~~va~~~ 412 (520)
T KOG0359|consen 333 PDYLGYAGLVYEYTLGEEKFTFIEKCNNPSSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGR 412 (520)
T ss_pred hhhccccceeEEeeccceeeEeeecCCCCcceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKV 474 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~v 474 (507)
+|+...++.+++.++++++|++||..+|++|++|+|+|+.+.+.+|...|..+ ..|+|+.+|+..+....||||.+.|
T Consensus 413 ~lr~~k~~vkgra~~g~~afa~all~ipk~La~nsg~D~qe~l~~l~~e~~~~--~~g~dl~~g~~~~~~~~gi~Dny~v 490 (520)
T KOG0359|consen 413 HLRESKKSVKGRAYLGVKAFANALLVIPKTLAKNSGLDEQETLVSLKKEHEVT--LRGLDLFRGEECDPSRKGIYDNYSV 490 (520)
T ss_pred HHHHhhhccCchhhhhHHHHHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhhh--hcccccccCCccchhhccccchHHH
Confidence 99988888999999999999999999999999999999999999999888644 4599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhcCC
Q 010585 475 KQAVLLSATEAAEMILRVDEIITCAP 500 (507)
Q Consensus 475 k~~~l~~A~e~a~~iL~iD~iI~~~~ 500 (507)
|.+.|..++-+|+.||-+|+++.+..
T Consensus 491 ~~~~l~s~~via~nlLlvDEi~rAG~ 516 (520)
T KOG0359|consen 491 KKQLLRSEAVIATNLLLVDEIIRAGM 516 (520)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999998864
No 41
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.6e-67 Score=487.95 Aligned_cols=364 Identities=36% Similarity=0.555 Sum_probs=345.4
Q ss_pred CccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHH
Q 010585 1 MASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL 80 (507)
Q Consensus 1 ~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL 80 (507)
++|+-|.+++++++++|+||+|++|+++.+. |++.+|||| .|++++++...+..|+.++|||||.+++|
T Consensus 31 Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pd--gditvtndg---------d~~IakLmv~LS~sqd~eIgdGtTgVvvL 99 (400)
T KOG0357|consen 31 KSHIGAAKAVARILRTSLGPKGLDKMLVSPD--GDITVTNDG---------VHQIAKLIVILSKSQDDEIGDGTTGVVVL 99 (400)
T ss_pred hhhhHHHHHHHHHHHhhcCccccccccccCC--CCceeeecc---------chHHHHHHHHhcccchhhhccCCcccEEe
Confidence 4789999999999999999999999999997 999999999 78999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 81 AGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 81 ~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++.++.++.+++.+|+||..|.+||..+...+++.|++++-+.+
T Consensus 100 a~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e------------------------------------ 143 (400)
T KOG0357|consen 100 AGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE------------------------------------ 143 (400)
T ss_pred cccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc------------------------------------
Confidence 99999999999999999999999999999999888876543211
Q ss_pred HHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHH
Q 010585 161 AVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAA 240 (507)
Q Consensus 161 a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~ 240 (507)
T Consensus 144 -------------------------------------------------------------------------------- 143 (400)
T KOG0357|consen 144 -------------------------------------------------------------------------------- 143 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccc
Q 010585 241 EIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGH 320 (507)
Q Consensus 241 ~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~ 320 (507)
+..+++++++.|+++++|||++||.+.++|-+++..++|||.--++|.||.+||++|+++++++++..+|+
T Consensus 144 ---------f~emi~~vK~~ga~l~icqwgfddeanhll~~n~lpavrwVGGpEiEliAiaT~grIVprF~eL~~~kLG~ 214 (400)
T KOG0357|consen 144 ---------FEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGF 214 (400)
T ss_pred ---------HHHHHHHHHhhCCcEEEEecccCchhhhHHhhcCCCceeecCCcceEEEEeecCCeeeccHhhhCHhhccc
Confidence 44578899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEc--CeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHH
Q 010585 321 CKLIEEIMIG--EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDE 398 (507)
Q Consensus 321 ~~~v~~~~ig--~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~ 398 (507)
|+.|++..+| .+++..+++|++++.+||.+||.+..+++|.+|++|||||++|++++|.++|.|||++|+.||-.+.+
T Consensus 215 aglVrE~sfgttkdkmlviEqc~nskaVTifvRg~Nkmii~EakrslhdalCvirnlird~rivYgGGaaEiscslav~~ 294 (400)
T KOG0357|consen 215 AGLVREISFGTTKDKMLVIEQCKNSKAVTIFVRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQ 294 (400)
T ss_pred cceEEEEecccccceEEEEEecCCCceEEEEEecCcceeHHHHHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhH
Confidence 9999999988 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHH-HcCCCceeEEcCCCcccccccCCcccchHHHHH
Q 010585 399 LARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEH-QKEGCPAGIDVISGSVGDMAELGISESFKVKQA 477 (507)
Q Consensus 399 ~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~-~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~ 477 (507)
.+.++++.+||++++||+||++||..|++|+|++|++.++++++.+ +.+++.+|+|+.-....||.+.+++||+..|++
T Consensus 295 ead~~~g~eqya~rafa~ale~ipmalaensgl~pi~~ls~~ka~q~~~~~~~lGidcl~~G~nDMk~~~vie~l~~Kkq 374 (400)
T KOG0357|consen 295 EADKIPGIEQYAFRAFADALESIPMALAENSGLDPIETLSDVKARQVKEMNPALGIDCLHKGTNDMKEQHVIETLIGKKQ 374 (400)
T ss_pred hhccCCcHHHHHHHHHHHHHhhcchhhhhccCCCchhhhhHhHHHHHHhcCcccCcchhccCchhhhhhccHHHhhhhHH
Confidence 9999999999999999999999999999999999999999998876 345789999998888899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHhhhcCC
Q 010585 478 VLLSATEAAEMILRVDEIITCAP 500 (507)
Q Consensus 478 ~l~~A~e~a~~iL~iD~iI~~~~ 500 (507)
.+..|++++.|||+||+++.+..
T Consensus 375 Qi~laTQ~vrMiLKiddv~~~~~ 397 (400)
T KOG0357|consen 375 QISLATQMVRMILKIDDVRKPGE 397 (400)
T ss_pred HHHHHHHHHHHhhhccceecCCC
Confidence 99999999999999999988754
No 42
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-51 Score=408.69 Aligned_cols=447 Identities=24% Similarity=0.339 Sum_probs=364.1
Q ss_pred HHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhcccc----ChHhHHHHHHHhhcccccCCCchHHHH
Q 010585 4 FVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHID----NPAAKVLVDISKVQDDEVGDGTTSVVV 79 (507)
Q Consensus 4 ~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~----hP~~~ll~~~~~~~~~~~GDGttt~vl 79 (507)
++++..|+++|..|+||+||+++|.+.. |.|.|||||.|+.+++.+. |.+|+++++.+.+.++..||||||+.+
T Consensus 30 l~Gv~~Ladav~~TlgpKgrnViieq~~--gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~tN~~agdGtttatv 107 (550)
T KOG0356|consen 30 LQGVDLLADAVAVTLGPKGRNVIIEQSW--GSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANNTNEEAGDGTTTATV 107 (550)
T ss_pred HhhHHHHHHHhhhhccCCcceEEccccc--CCCceecCCceeeccccccchhhhhccHHHHHHHhhccCccccCcchHHH
Confidence 5789999999999999999999999885 9999999999999999974 669999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 80 LAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 80 L~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
|+.++..++.+-+.+|.+|.++.+|...+.+.+.+.|+++++|+... +++.+++. ++.+.+...++++.
T Consensus 108 lar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~-----eeIaqVAt------iSAngD~~ig~li~ 176 (550)
T KOG0356|consen 108 LARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTP-----EEIAQVAT------ISANGDKEIGNLIS 176 (550)
T ss_pred HHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCH-----HHHHHHHh------hhcCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876 67888886 34678999999999
Q ss_pred HHHHhhccCCCcccceeeecCCCCCCC-ceeeeeEEEeecCC-C-------CCCccccCccEEEeeeccccccccccCeE
Q 010585 160 DAVMRLKGSTNLESIQIIKKPGGSLKD-SFLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYGAR 230 (507)
Q Consensus 160 ~a~~~~~~~~~~~~I~i~~~~g~~~~d-S~l~~Givl~~~~~-~-------~~~~~~~n~~I~l~~~~L~~~~~~~~~~~ 230 (507)
+|+.+++.++- |.-..|....| -++.+|+-|+++|. + .+..++++|++++.+
T Consensus 177 ~a~~kvG~~GV-----Itv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~-------------- 237 (550)
T KOG0356|consen 177 DAMKKVGRKGV-----ITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSE-------------- 237 (550)
T ss_pred HHHHHhCcCCe-----EEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhh--------------
Confidence 99999987653 22235555544 47899999999862 1 123567777777664
Q ss_pred EEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHc------CCeEEecCC-----hhhHHHHH
Q 010585 231 VRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHAD-----FDGIERLA 299 (507)
Q Consensus 231 ~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~------~I~~i~~v~-----~~~L~~ia 299 (507)
..+++.+++.+..+. .. .... -+++....++..++..|--+ .+++++... +..+.+++
T Consensus 238 kki~~v~~ivp~LE~--A~--------~~~~-PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Dia 306 (550)
T KOG0356|consen 238 KKISSVQSIVPALEL--AL--------AKRR-PLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIA 306 (550)
T ss_pred hhhhHHHHHhHHHHH--hh--------hccC-ceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHH
Confidence 235666665543221 11 1111 24444556666555444222 334444433 34599999
Q ss_pred HHhCCeeccc------cCCCCCCCccccceEEEEEEcCeEEEEEEc----------------------------------
Q 010585 300 LVTGGEIAST------FDNPESVKLGHCKLIEEIMIGEDKLIHFSG---------------------------------- 339 (507)
Q Consensus 300 ~~tGa~ii~~------l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~---------------------------------- 339 (507)
.+||+.++.. ++..+..++|.|..+. +.-+....+.+
T Consensus 307 i~Tg~~v~~~e~~~l~le~~~~~dLG~~~evv---vtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~ 383 (550)
T KOG0356|consen 307 ILTGATVFGEELSTLNLEDAKLEDLGEVGEVV---VTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERL 383 (550)
T ss_pred HHhhhhhhccchhhcccccCchhhcCcceeEE---EecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHH
Confidence 9999999974 4566677899998877 32222222221
Q ss_pred -cCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHh
Q 010585 340 -VEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418 (507)
Q Consensus 340 -~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL 418 (507)
-..+++++|.++|.++.+++|++.+++||++++++++ ++|+|||||++.++|+..|.+....-+.+++.+++++.+||
T Consensus 384 a~ls~gvavi~vGg~se~Ev~ekk~rv~dalnat~aav-eeGivpGGG~all~~~~~l~~lk~~~~~~~k~G~eiv~~Al 462 (550)
T KOG0356|consen 384 AKLSGGVAVIKVGGHSEVEVNEKKDRVEDALNATRAAV-EEGIVPGGGTALLRAIPVLDELKATNNFDQKVGVEIVKKAL 462 (550)
T ss_pred HHhcCCeEEEEecCcchhhhhhhhhhHHHHHHHHHHHh-hcCcccCCchHHHHhhhhhhhcccccchHhhhhHHHHHHHH
Confidence 0025799999999999999999999999999999999 69999999999999999999877644567788899999999
Q ss_pred hHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 419 VAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 419 ~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
..|..++++|||.|+..++.+++. ..+|||..+|+++||.+.||+||+.|.+.+|..|..+++++++++.+|..
T Consensus 463 ~~P~~~IakNAGvdg~~vv~Kv~~------~~~gyda~~~ey~dlv~~GiidP~kVvr~al~~a~~vasll~tte~vvte 536 (550)
T KOG0356|consen 463 RLPAQTIAKNAGVDGSVVVEKVLN------DDYGYDAAKGEYVDLVEAGIIDPTKVVRTALTDAAGVASLLTTTEAVVTE 536 (550)
T ss_pred hhhHHHHHHhcCCchHHHHHHHHh------hhhhhhhhcccHHHHHhccCCChHHHHHHhhhhhhHHHHHHhhheeEEEe
Confidence 999999999999999999999982 27999999999999999999999999999999999999999999999988
Q ss_pred CCCCC
Q 010585 499 APRRR 503 (507)
Q Consensus 499 ~~~~~ 503 (507)
.|+.+
T Consensus 537 ipk~~ 541 (550)
T KOG0356|consen 537 IPKEE 541 (550)
T ss_pred ccccc
Confidence 87754
No 43
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=100.00 E-value=3.9e-39 Score=311.48 Aligned_cols=227 Identities=23% Similarity=0.355 Sum_probs=208.1
Q ss_pred ccchhHHHHHHHHHHHhhcc------CCCcc-cceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeecc
Q 010585 148 SQDKEHFGQLAVDAVMRLKG------STNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAM 219 (507)
Q Consensus 148 ~~~~~~l~~lv~~a~~~~~~------~~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L 219 (507)
..|.++|++++++|+..+.. .+|++ +|+|.+++||+++||++++|+++++.+. ..||++++||||++++|+|
T Consensus 17 ~~~~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS~li~Gvvi~k~~~~~~m~~~i~n~kIlll~~~L 96 (261)
T cd03334 17 ESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPL 96 (261)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHcEEEeeEEEeCCCCCccCCcccCCCcEEEEeeee
Confidence 45789999999999998742 35665 5999999999999999999999998865 5699999999999999999
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHH
Q 010585 220 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLA 299 (507)
Q Consensus 220 ~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia 299 (507)
++++++. +++++..+.+.|++++.+++++|.+.|+|+|+++++|++.+++||.++||++++++++++|+|||
T Consensus 97 e~~~~~~--------~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~gI~~v~~v~~~dl~rIa 168 (261)
T cd03334 97 EYQRVEN--------KLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERIS 168 (261)
T ss_pred ccccccC--------CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHCCCEEEEecCHHHHHHHH
Confidence 9988742 45788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeecccc-CCCCCCCccccceEEEEEEcC-----eEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHH
Q 010585 300 LVTGGEIASTF-DNPESVKLGHCKLIEEIMIGE-----DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLS 373 (507)
Q Consensus 300 ~~tGa~ii~~l-~~l~~~~lG~~~~v~~~~ig~-----~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~ 373 (507)
++|||++++++ +.++++.+|+|+.|++.++|+ ++|++|++|+.++.+||+|||+|+++++|.||+++||+++++
T Consensus 169 ~~tGa~ii~~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~~~~TIlLRG~t~~~lde~eR~i~Dal~v~~ 248 (261)
T cd03334 169 RCTGADIISSMDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKELGCTILLRGGDLEELKKVKRVVEFMVFAAY 248 (261)
T ss_pred HHhCCEEecChhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCCceeEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999994 588999999999999999996 699999999989999999999999999999999999999999
Q ss_pred HHhhCCccc
Q 010585 374 QTVNDSRVL 382 (507)
Q Consensus 374 ~~~~~~~vv 382 (507)
++..+..++
T Consensus 249 ~~~le~~~~ 257 (261)
T cd03334 249 HLKLETSFL 257 (261)
T ss_pred HHHHhHHHH
Confidence 998765544
No 44
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=100.00 E-value=1.2e-35 Score=279.86 Aligned_cols=204 Identities=39% Similarity=0.609 Sum_probs=193.0
Q ss_pred HHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcc---CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccc
Q 010585 132 SDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRI 207 (507)
Q Consensus 132 ~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~ 207 (507)
+.|.++++|+++||+ +.|.+.+++++++|+..+++ .++.++|+|.+++||+++||++++|++|++++. +.||+++
T Consensus 2 ~~l~~ia~ts~~sk~-~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m~~~~ 80 (209)
T cd03333 2 ELLLQVATTSLNSKL-SSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASPYMPKRL 80 (209)
T ss_pred hHHHHHHHHHhccch-hhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhceeEeeEEEeccccCCCCCeEc
Confidence 468999999999999 99999999999999999965 356789999999999999999999999999965 6689999
Q ss_pred cCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEE
Q 010585 208 ENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAI 287 (507)
Q Consensus 208 ~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i 287 (507)
+||||++++++|++ +|+++++|++.++++|.++||+++
T Consensus 81 ~n~~Ill~~~~le~------------------------------------------vii~~~~I~~~al~~l~~~~I~~v 118 (209)
T cd03333 81 ENAKILLLDCPLEY------------------------------------------VVIAEKGIDDLALHYLAKAGIMAV 118 (209)
T ss_pred CCCcEEEEeCCeeE------------------------------------------EEEecCcccHHHHHHHHHCCCEEE
Confidence 99999999998865 999999999999999999999999
Q ss_pred ecCChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhH
Q 010585 288 EHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHD 367 (507)
Q Consensus 288 ~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~d 367 (507)
+++++++|+|||++|||+++++++++++..+|+|+++++..+|+++|++|+++..++.|||+|||||+.+++|.||+++|
T Consensus 119 ~~~~~~~l~~ia~~tga~ii~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~tIllrG~t~~~l~e~kr~l~d 198 (209)
T cd03333 119 RRVKKEDLERIARATGATIVSSLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKGGKAATILLRGATEVELDEVKRSLHD 198 (209)
T ss_pred EeCCHHHHHHHHHHHCCEEecccccCChhhceeeeEEEEEEECCeEEEEEEcCCCCCEEEEEEECCCHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHhhC
Q 010585 368 ALCVLSQTVND 378 (507)
Q Consensus 368 al~~~~~~~~~ 378 (507)
|++++++++++
T Consensus 199 al~~~~~~~~~ 209 (209)
T cd03333 199 ALCAVRAAVEE 209 (209)
T ss_pred HHHHHHHHhhC
Confidence 99999999853
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.82 E-value=8.4e-20 Score=200.48 Aligned_cols=232 Identities=22% Similarity=0.305 Sum_probs=201.3
Q ss_pred cchhHHHHHHHHHHHhhccC------CC-cccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccc
Q 010585 149 QDKEHFGQLAVDAVMRLKGS------TN-LESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMD 220 (507)
Q Consensus 149 ~~~~~l~~lv~~a~~~~~~~------~~-~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~ 220 (507)
.|.+.+..++.+|...+.++ .| .++++|.+++||+..||+++.|+++.+..+ ..|..++++|||+++.++|+
T Consensus 332 ~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~le 411 (1598)
T KOG0230|consen 332 EWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLE 411 (1598)
T ss_pred hHHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecchh
Confidence 56777889999999887543 22 369999999999999999999999998865 57999999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 010585 221 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 300 (507)
Q Consensus 221 ~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~ 300 (507)
+.+.... +.+.+. +.++|+++++..+.+|....+|+++..++|...++++|...+|.++-++++.-|+||++
T Consensus 412 yqrisn~-----lsS~et---vlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k~I~lvlnvK~s~leRIsR 483 (1598)
T KOG0230|consen 412 YQRISNQ-----LSSIET---VLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDKGISLVLNVKRSLLERISR 483 (1598)
T ss_pred hhhhhcc-----ccchHH---HHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhccCeEEEEeccHHHHHHHHH
Confidence 9875432 444443 33348999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeccccCCCCCCCccccceEEEEEEc-----CeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHH
Q 010585 301 VTGGEIASTFDNPESVKLGHCKLIEEIMIG-----EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQT 375 (507)
Q Consensus 301 ~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig-----~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~ 375 (507)
+|||.|+++++.++...+|+|+.++...+- .+.+.+|+||+.+..|||+|||....++++.++.++-++.++.++
T Consensus 484 ~tga~I~~siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l 563 (1598)
T KOG0230|consen 484 CTGADIVPSVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPLGCTILLRGDSLEELKKVKHVVQYLVFAAYHL 563 (1598)
T ss_pred HhcCceecchhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCCCceEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998866554 567889999999999999999999999999999999999988877
Q ss_pred hhCCccccCCCch
Q 010585 376 VNDSRVLFGGGWP 388 (507)
Q Consensus 376 ~~~~~vvpGGG~~ 388 (507)
.-+..++.-=|+.
T Consensus 564 ~LE~SflaDe~as 576 (1598)
T KOG0230|consen 564 ALETSFLADEGAS 576 (1598)
T ss_pred HHhhhhhhccCCc
Confidence 5555555555443
No 46
>cd00851 MTH1175 This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).
Probab=53.17 E-value=42 Score=26.86 Aligned_cols=43 Identities=16% Similarity=0.194 Sum_probs=34.5
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHH
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIER 297 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ 297 (507)
.++.|...+|++|++. ++.+.+...|.++||.++...+ ..++.
T Consensus 55 ~~~~l~~~~v~~vi~~-~iG~~~~~~l~~~gI~v~~~~~-~~i~~ 97 (103)
T cd00851 55 AAEFLADEGVDVVIVG-GIGPRALNKLRNAGIKVYKGAE-GTVEE 97 (103)
T ss_pred HHHHHHHcCCCEEEeC-CCCcCHHHHHHHCCCEEEEcCC-CCHHH
Confidence 5666777899999996 6899999999999999997665 34444
No 47
>PF02579 Nitro_FeMo-Co: Dinitrogenase iron-molybdenum cofactor; InterPro: IPR003731 This entry represents several Nif (B, X and Y) proteins, which are involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing bacteria. The nitrogenase complex catalyses the reduction of atmospheric dinitrogen to ammonia, and is composed of an iron metalloprotein (dinitrogenase reductase; homodimer of NifH; IPR000392 from INTERPRO) and a Fe-Mo metalloprotein (dinitrogenase; heterotetramer of NifD and NifK; IPR000318 from INTERPRO). The pathway for the synthesis of the Fe-Mo cofactor involves several proteins, including NifB, NifE, NifH, NifN, NifQ, NifV and NifX. NifB appears to be an iron-sulphur source for FeMo-co biosynthesis, while NifX may be associated with the mature FeMo-co, in particular with the addition of homocitrate during the last step of biosynthesis []. The NifX protein shows sequence similarity with the C terminus of NifB [], as well as to the conserved protein MTH1175 from the archaeon Methanobacterium thermoautotrophicum, which displays a ribonuclease H-like motif of three layers, alpha/beta/alpha, with a single mixed beta-sheet [].; PDB: 2QTD_A 2KLA_A 1EO1_A 1P90_A 1RDU_A 2YX6_D 1O13_A 1T3V_A 2RE2_B 2WFB_A.
Probab=52.86 E-value=44 Score=26.21 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=33.7
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHH
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIER 297 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ 297 (507)
..+.|...+|+++++. ++.+.+...|.++||.++.. ...+++.
T Consensus 45 ~~~~l~~~~v~~li~~-~iG~~~~~~L~~~gI~v~~~-~~~~i~~ 87 (94)
T PF02579_consen 45 IAKFLAEEGVDVLICG-GIGEGAFRALKEAGIKVYQG-AGGDIEE 87 (94)
T ss_dssp HHHHHHHTTESEEEES-CSCHHHHHHHHHTTSEEEES-TSSBHHH
T ss_pred HHHHHHHcCCCEEEEe-CCCHHHHHHHHHCCCEEEEc-CCCCHHH
Confidence 4566667899999996 68999999999999999987 4433443
No 48
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=49.22 E-value=70 Score=27.07 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=34.3
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChh
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFD 293 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~ 293 (507)
..+.|++.++++|++. .+.+.+...|.++||-+..-.+.+
T Consensus 57 ~a~~l~~~gvdvvi~~-~iG~~a~~~l~~~GIkv~~~~~~~ 96 (121)
T COG1433 57 IAELLVDEGVDVVIAS-NIGPNAYNALKAAGIKVYVAPGGT 96 (121)
T ss_pred HHHHHHHcCCCEEEEC-ccCHHHHHHHHHcCcEEEecCCCC
Confidence 5788889999999997 688999999999999998766633
No 49
>cd00562 NifX_NifB This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).
Probab=42.77 E-value=87 Score=24.86 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=32.2
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCC
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHAD 291 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~ 291 (507)
....+...+|+++++. ++.+.+...|.++||.++...+
T Consensus 53 ~~~~l~~~~v~~vi~~-~iG~~a~~~l~~~gI~v~~~~~ 90 (102)
T cd00562 53 AARLLALEGCDAVLVG-GIGGPAAAKLEAAGIKPIKAAE 90 (102)
T ss_pred HHHHHHHCCCcEEEEc-ccCccHHHHHHHcCCEEEEcCC
Confidence 4566677899999997 5899999999999999987665
No 50
>COG3962 Acetolactate synthase [Amino acid transport and metabolism]
Probab=29.15 E-value=51 Score=34.46 Aligned_cols=41 Identities=22% Similarity=0.300 Sum_probs=35.0
Q ss_pred HHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcC
Q 010585 362 ERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKT 403 (507)
Q Consensus 362 ~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~ 403 (507)
++.+.+|+..+|++- +|-+|.|||+-+-.+...|+.++++.
T Consensus 216 ~~eL~~A~~lik~ak-~PlIvaGGGv~YS~A~~~L~af~E~~ 256 (617)
T COG3962 216 ERELADAAALIKSAK-KPLIVAGGGVLYSGAREALRAFAETH 256 (617)
T ss_pred HHHHHHHHHHHHhcC-CCEEEecCceeechHHHHHHHHHHhc
Confidence 356778999999995 79999999999999999999888753
No 51
>PF07141 Phage_term_sma: Putative bacteriophage terminase small subunit; InterPro: IPR010789 This entry is represented by Bacteriophage 712, Gp1; it is a family of uncharacterised viral proteins. This family consists of several putative Lactococcus bacteriophage terminase small subunit proteins. The exact function of this family is unknown.
Probab=25.16 E-value=1.8e+02 Score=24.66 Aligned_cols=67 Identities=12% Similarity=0.207 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccc-cCCChhhhHHHHHHHHHHhhcccc
Q 010585 79 VLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVD-NKENAETFKSDLMKIAMTTLSSKI 146 (507)
Q Consensus 79 lL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~-~~~~~~~~~~~l~~i~~t~l~sk~ 146 (507)
.-..-|+++...+|+.|-+.++|+..+....+-..+. ++-.+. ++.-.+.-+..|+.+|+++|.+|+
T Consensus 15 mYtE~Lve~II~~IE~dt~~sEIc~~L~isrKtFyeW-rdtk~eA~eeA~~~rdd~LlmLArssLk~KL 82 (174)
T PF07141_consen 15 MYTEPLVEQIIDKIESDTNDSEICTSLHISRKTFYEW-RDTKIEAYEEAKGIRDDNLLMLARSSLKSKL 82 (174)
T ss_pred hhhhHHHHHHHHHHHcCCcHHHHHHHHhccHHHHHHH-HhhhHHHHHHHHhhccchHHHHHHHHHHhhc
Confidence 4566788999999999999899988877665433222 211110 000000012467888888887764
No 52
>PF07526 POX: Associated with HOX; InterPro: IPR006563 This domain in found exclusively in plant proteins, associated with HOX domains which may suggest these proteins are homeodomain transcription factors.
Probab=23.99 E-value=1.8e+02 Score=25.28 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=28.6
Q ss_pred HHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhh
Q 010585 357 VLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR 401 (507)
Q Consensus 357 ~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~ 401 (507)
+++|++++.+....-++.++..=-.|.|.|++-.+.+-+|+..++
T Consensus 85 mL~eVd~RY~qY~~Qmq~VvssFe~vaG~gaA~~YtalAlqamSr 129 (140)
T PF07526_consen 85 MLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAAPYTALALQAMSR 129 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 566666666555554444442223578999998888877876554
No 53
>smart00574 POX domain associated with HOX domains.
Probab=22.97 E-value=1.5e+02 Score=25.68 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhh
Q 010585 356 HVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR 401 (507)
Q Consensus 356 ~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~ 401 (507)
.+++|++++.+....-++.++..=..|+|+|++-.+.+-+|+..+.
T Consensus 84 ~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~Sr 129 (140)
T smart00574 84 SMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISR 129 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 3567777776666665555553334678999988888877776543
No 54
>KOG2663 consensus Acetolactate synthase, small subunit [Amino acid transport and metabolism]
Probab=21.68 E-value=91 Score=29.77 Aligned_cols=27 Identities=37% Similarity=0.619 Sum_probs=24.3
Q ss_pred eEEEecCCcHHHHHHHHHHHhHHHHHHH
Q 010585 346 CTIVLRGASHHVLDEAERSLHDALCVLS 373 (507)
Q Consensus 346 ~Till~G~t~~~l~e~~~~i~dal~~~~ 373 (507)
.||+++| ++.+++|.++.++|-.++++
T Consensus 121 mTIVl~G-td~VveQa~rQiedlVnV~a 147 (309)
T KOG2663|consen 121 MTIVLQG-TDGVVEQARRQIEDLVNVYA 147 (309)
T ss_pred ceEEEec-cHHHHHHHHHHHHHhhhhhe
Confidence 4899999 78999999999999999875
No 55
>PF07278 DUF1441: Protein of unknown function (DUF1441); InterPro: IPR009901 This entry is represented by Bacteriophage VT1-Sakai, H0025. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown.
Probab=21.17 E-value=1.8e+02 Score=25.68 Aligned_cols=67 Identities=12% Similarity=0.144 Sum_probs=44.0
Q ss_pred CCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCC
Q 010585 352 GASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGL 431 (507)
Q Consensus 352 G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~ 431 (507)
.|.+..-.+++.-++.-..-++.-.+.+-++|-.-+ .++++ ..++++...|+++|-.|-+.||+
T Consensus 60 ~p~~m~p~dRK~w~qsE~eRlk~e~e~g~Lipa~eV--------~~~~s--------~~~Kav~q~LetlPD~LERd~gL 123 (152)
T PF07278_consen 60 DPDDMTPKDRKAWWQSENERLKFEKETGQLIPAEEV--------RREMS--------EMAKAVVQVLETLPDILERDAGL 123 (152)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHcccCcHHHH--------HHHHH--------HHHHHHHHHHHHhhHHHHhcCCC
Confidence 334344446666666666666666655666653222 12222 36788999999999999999999
Q ss_pred CHH
Q 010585 432 DSA 434 (507)
Q Consensus 432 ~~~ 434 (507)
.|.
T Consensus 124 ~p~ 126 (152)
T PF07278_consen 124 PPE 126 (152)
T ss_pred CHH
Confidence 985
Done!