Query 010585
Match_columns 507
No_of_seqs 144 out of 1521
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 09:58:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010585.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010585hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_B T-complex protein 1 sub 100.0 8E-113 3E-117 900.5 56.7 500 2-501 14-513 (513)
2 3iyg_H T-complex protein 1 sub 100.0 4E-112 1E-116 894.9 56.3 495 2-499 15-514 (515)
3 3iyg_A T-complex protein 1 sub 100.0 9E-112 3E-116 895.8 56.3 493 2-500 14-529 (529)
4 3iyg_G T-complex protein 1 sub 100.0 3E-111 1E-115 888.6 55.3 492 2-499 13-514 (515)
5 3ruv_A Chaperonin, CPN; double 100.0 5E-111 2E-115 891.4 52.1 495 2-502 23-522 (543)
6 3iyg_D T-complex protein 1 sub 100.0 1E-110 4E-115 885.1 54.1 492 2-499 15-518 (518)
7 3ko1_A Chaperonin; 9-fold symm 100.0 1E-111 4E-116 896.1 46.4 497 2-504 34-538 (553)
8 1q3q_A Thermosome alpha subuni 100.0 8E-111 3E-115 890.9 52.6 496 2-503 27-529 (548)
9 1a6d_B Thermosome (beta subuni 100.0 6E-111 2E-115 892.1 51.3 495 2-502 25-526 (543)
10 3iyg_Z T-complex protein 1 sub 100.0 3E-110 1E-114 880.9 52.9 490 2-499 14-517 (517)
11 3p9d_G T-complex protein 1 sub 100.0 1E-111 3E-116 897.2 40.9 500 2-504 28-532 (550)
12 3p9d_A T-complex protein 1 sub 100.0 1E-110 5E-115 890.2 48.4 497 2-504 28-553 (559)
13 1a6d_A Thermosome (alpha subun 100.0 4E-110 1E-114 885.4 49.4 493 2-502 26-525 (545)
14 3iyg_E T-complex protein 1 sub 100.0 2E-108 5E-113 869.2 55.8 493 2-498 14-514 (515)
15 3p9d_B T-complex protein 1 sub 100.0 6E-111 2E-115 889.8 35.2 502 2-505 21-524 (527)
16 3iyg_Q T-complex protein 1 sub 100.0 3E-108 1E-112 866.3 55.1 490 2-499 15-512 (512)
17 3p9d_D T-complex protein 1 sub 100.0 4E-110 1E-114 881.9 40.0 492 2-499 23-528 (528)
18 3p9d_C T-complex protein 1 sub 100.0 2E-109 6E-114 881.3 43.1 494 2-501 23-588 (590)
19 3p9d_H T-complex protein 1 sub 100.0 2E-110 7E-115 890.4 33.4 495 2-502 30-551 (568)
20 3p9d_E T-complex protein 1 sub 100.0 1E-108 5E-113 875.4 46.7 497 2-501 49-560 (562)
21 3p9d_F T-complex protein 1 sub 100.0 5E-109 2E-113 877.7 37.7 498 2-503 21-541 (546)
22 3aq1_B Thermosome subunit; gro 100.0 3E-103 1E-107 825.2 41.3 473 26-504 1-481 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 2.4E-93 8.3E-98 753.5 43.1 451 2-502 14-528 (543)
24 1kp8_A Groel protein; chaperon 100.0 1.2E-92 4.1E-97 746.9 40.5 450 2-503 14-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 1.5E-93 5.1E-98 754.5 31.9 451 2-503 15-529 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 4.5E-92 1.5E-96 740.4 32.8 450 2-504 14-526 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.4E-36 4.6E-41 275.5 17.4 172 184-356 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 2.2E-31 7.5E-36 236.4 13.0 153 190-343 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 98.4 3.3E-06 1.1E-10 74.9 12.8 144 188-372 3-171 (194)
30 3osx_A 60 kDa chaperonin; alph 98.3 1E-05 3.6E-10 71.8 14.5 141 191-372 13-178 (201)
31 1srv_A Protein (groel (HSP60 c 98.3 4.7E-06 1.6E-10 70.3 9.7 118 192-337 1-142 (145)
32 1o13_A Probable NIFB protein; 51.6 31 0.0011 28.5 6.3 52 252-304 67-118 (136)
33 2yx6_A Hypothetical protein PH 50.7 36 0.0012 27.2 6.5 53 252-305 54-106 (121)
34 1eo1_A Hypothetical protein MT 47.1 56 0.0019 26.2 7.2 52 253-305 57-108 (124)
35 2wfb_A Putative uncharacterize 46.0 45 0.0015 26.6 6.3 51 253-304 59-110 (120)
36 1rdu_A Conserved hypothetical 37.6 49 0.0017 26.1 5.3 52 253-305 54-105 (116)
37 2re2_A Uncharacterized protein 33.2 74 0.0025 26.1 5.8 50 253-304 71-120 (136)
38 2ooa_A E3 ubiquitin-protein li 28.8 1.1E+02 0.0039 20.6 4.8 35 86-120 13-50 (52)
39 1pul_A Hypothetical protein C3 26.8 1.7E+02 0.0059 23.7 6.6 65 374-441 49-113 (125)
40 2ln3_A De novo designed protei 23.4 1.9E+02 0.0066 20.1 6.5 47 250-308 15-61 (83)
41 2cos_A Serine/threonine protei 23.1 1.4E+02 0.0047 20.3 4.4 35 89-123 14-52 (54)
No 1
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=8.2e-113 Score=900.45 Aligned_cols=500 Identities=70% Similarity=1.068 Sum_probs=478.9
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++...|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+
T Consensus 14 ~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA 93 (513)
T 3iyg_B 14 SSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLA 93 (513)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhhCCChhhhHHHH
Confidence 69999999999999999999999999997211899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.+.+.+++.|.++++|+++||+.++++++|++++++|
T Consensus 94 ~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdA 173 (513)
T 3iyg_B 94 AELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEA 173 (513)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999873311236789999999999999999999999999999
Q ss_pred HHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHH
Q 010585 162 VMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAE 241 (507)
Q Consensus 162 ~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~ 241 (507)
+.++++++|+++|+|++++||+.+||++++|++|++++.+.||++++||||++++++|++++++..++++.+++++++.+
T Consensus 174 v~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~ 253 (513)
T 3iyg_B 174 VLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAE 253 (513)
T ss_pred HHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCCCceeecCceEEEEcCCcccccccccCCceEEcCHHHHHH
Confidence 99998888899999999999999999999999999998666999999999999999999999882247889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCcccc
Q 010585 242 IEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHC 321 (507)
Q Consensus 242 l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~~ 321 (507)
+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+|
T Consensus 254 ~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a 333 (513)
T 3iyg_B 254 IEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGSC 333 (513)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEecccccCCHhHCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhh
Q 010585 322 KLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR 401 (507)
Q Consensus 322 ~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~ 401 (507)
+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|++++.
T Consensus 334 ~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~ 413 (513)
T 3iyg_B 334 KLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLAS 413 (513)
T ss_pred cEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHH
Q 010585 402 KTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLS 481 (507)
Q Consensus 402 ~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~ 481 (507)
+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|||||+.||+++|+.
T Consensus 414 ~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 493 (513)
T 3iyg_B 414 RTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLS 493 (513)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHhhhcCCC
Q 010585 482 ATEAAEMILRVDEIITCAPR 501 (507)
Q Consensus 482 A~e~a~~iL~iD~iI~~~~~ 501 (507)
|+|+|+||||||++|.+.|+
T Consensus 494 A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 494 AAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999998764
No 2
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-112 Score=894.86 Aligned_cols=495 Identities=36% Similarity=0.554 Sum_probs=476.2
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 15 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA 92 (515)
T 3iyg_H 15 SNISACQVIAEAVRTTLGPRGMDKLIVDGR--GKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLA 92 (515)
T ss_pred HHHHHHHHHHHHHhhCcCCCCCeEEEECCC--CCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCcchhhHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCC-ChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKE-NAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~-~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||++|.+++.+|+||+.|++||++|++.+++.|+++++|++. +.+..++.|.++++|+++||+.+.++++|++++++
T Consensus 93 ~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livd 172 (515)
T 3iyg_H 93 AEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVD 172 (515)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999863 22222567899999999999999999999999999
Q ss_pred HHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCC-C---CCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 161 AVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-I---GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 161 a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~---~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
|+.++++++|+++|+|++++||+..||++++|++|++++. + .||++++||||++++++|++++++.. +++.++++
T Consensus 173 Av~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~e~~-~~v~is~~ 251 (515)
T 3iyg_H 173 AVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDN-AEIRVHTV 251 (515)
T ss_pred HHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccccccC-ceEEeCCH
Confidence 9999988889999999999999999999999999999975 2 35899999999999999999999885 78999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++.++.+.|+++++.++++|.+.+++||+++++|+|.+++||.++||++++++++++|+|||++|||+++++++++++.
T Consensus 252 ~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ii~~l~~~~~~ 331 (515)
T 3iyg_H 252 EDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSD 331 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCEEeeccccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEV 396 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L 396 (507)
++|+|+.|++.++|+++|++|+||.+++.|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|
T Consensus 332 ~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L 411 (515)
T 3iyg_H 332 VLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL 411 (515)
T ss_pred HCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHH
Q 010585 397 DELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQ 476 (507)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~ 476 (507)
++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|||||+.||+
T Consensus 412 ~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~ 491 (515)
T 3iyg_H 412 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRI 491 (515)
T ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHH
Confidence 99999999999999999999999999999999999999999999999987778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHhhhcC
Q 010585 477 AVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 477 ~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
++|+.|+|+|+||||||++|.+.
T Consensus 492 ~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 492 NALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999864
No 3
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.7e-112 Score=895.75 Aligned_cols=493 Identities=37% Similarity=0.569 Sum_probs=471.6
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 14 ~ni~a~~~la~~v~ttlGP~G~~kml~~~~--g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GDGTTtvvvLA 91 (529)
T 3iyg_A 14 QNVMAAASIANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIA 91 (529)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCCChhhHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~-~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||++|.+++.+|+||+.|++||+.|++.+++.|++ +++|++..+ ++.|.++|+|+++||+.++++++|++++++
T Consensus 92 ~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~---~e~l~~va~tsl~sK~~~~~~~~i~~livd 168 (529)
T 3iyg_A 92 AELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELG---RDCLINAAKTSMSSKVIGINGDFFANLVVD 168 (529)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHhccCcccccHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 999887422 578999999999999999999999999999
Q ss_pred HHHhhc---c----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEE
Q 010585 161 AVMRLK---G----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVR 232 (507)
Q Consensus 161 a~~~~~---~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~ 232 (507)
|+.+++ + ++|+++|+|++++|+++.||++++|++|++++. ++||+.++||||++++++|++++++.. +++.
T Consensus 169 Av~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e~~-~~v~ 247 (529)
T 3iyg_A 169 AVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLG-VQVV 247 (529)
T ss_pred HHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcccccccCC-ceEE
Confidence 999986 1 356778999999999999999999999999864 679999999999999999999999884 7899
Q ss_pred EcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCC
Q 010585 233 VDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDN 312 (507)
Q Consensus 233 i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~ 312 (507)
+++++++..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++++|+|||++|||++++++++
T Consensus 248 i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~iv~~~~~ 327 (529)
T 3iyg_A 248 ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLAN 327 (529)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCeeecchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CC------CCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCC
Q 010585 313 PE------SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 386 (507)
Q Consensus 313 l~------~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG 386 (507)
++ +.++|+|+.|++.++|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||
T Consensus 328 l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGG 407 (529)
T 3iyg_A 328 LEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGG 407 (529)
T ss_pred ccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCc
Confidence 64 567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCC--------CceeEEcCCC
Q 010585 387 WPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG--------CPAGIDVISG 458 (507)
Q Consensus 387 ~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~--------~~~G~d~~~g 458 (507)
++|++++.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|+..|..++ .++|||+.+|
T Consensus 408 a~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g 487 (529)
T 3iyg_A 408 AVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNG 487 (529)
T ss_pred HHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999997665 6899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCC
Q 010585 459 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 500 (507)
Q Consensus 459 ~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~ 500 (507)
++.||++.|||||+.||+++|+.|+|+|+||||||++|...|
T Consensus 488 ~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 488 KPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred CccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 999999999999999999999999999999999999998754
No 4
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.3e-111 Score=888.58 Aligned_cols=492 Identities=29% Similarity=0.478 Sum_probs=471.3
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|||++++|++|++++||||||+|+||
T Consensus 13 ~ni~a~~~la~~vkttLGP~G~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA 90 (515)
T 3iyg_G 13 GNINAAKTIADIIRTCLGPKSMMKMLLDPM--GGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILA 90 (515)
T ss_pred HHHHHHHHHHHHHhcCcCCCCCeEEEECCC--CCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+++||..+.+.+++++++++|
T Consensus 91 geLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~~~l~~va~tsl~sK~i~~~~~~~~~i~vda 167 (515)
T 3iyg_G 91 GEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSN---RDTMLNIINSSITTKVISRWSSLACNIALDA 167 (515)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC---HHHHHHHHHHHhcCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987532 4789999999999999999999999999999
Q ss_pred HHhhcc------CCCcc-cceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEE
Q 010585 162 VMRLKG------STNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRV 233 (507)
Q Consensus 162 ~~~~~~------~~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i 233 (507)
+..+.. ++|++ +|+|++++||+++||++++|++|++++. +.||++++||||++++|+|++++++.+ +++.+
T Consensus 168 v~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~-~~v~i 246 (515)
T 3iyg_G 168 VKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQ-TDIEI 246 (515)
T ss_pred HHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccccccccC-ceEEe
Confidence 988751 14554 4999999999999999999999999975 579999999999999999999999875 78999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCC
Q 010585 234 DSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNP 313 (507)
Q Consensus 234 ~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l 313 (507)
++++++.++.+.|++++++++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++
T Consensus 247 s~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii~~l~~l 326 (515)
T 3iyg_G 247 TREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEEL 326 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccc-cceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHH
Q 010585 314 ESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 392 (507)
Q Consensus 314 ~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~l 392 (507)
++.++|+ |+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++||++++|++++++++|||||++|+++
T Consensus 327 ~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~ 406 (515)
T 3iyg_G 327 REEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAV 406 (515)
T ss_pred ChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcC-CCceeEEcCCCcccccccCCcccc
Q 010585 393 AKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDVISGSVGDMAELGISES 471 (507)
Q Consensus 393 a~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~-~~~~G~d~~~g~~~d~~~~gi~dp 471 (507)
+.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|+..|..+ ++++|||+.+|++.||++.|||||
T Consensus 407 ~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp 486 (515)
T 3iyg_G 407 AHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEP 486 (515)
T ss_pred HHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEc
Confidence 9999999999999999999999999999999999999999999999999998754 467999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 472 FKVKQAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 472 ~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
+.||+++|+.|+|+|+||||||++|...
T Consensus 487 ~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 487 LAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 9999999999999999999999999764
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=5.4e-111 Score=891.36 Aligned_cols=495 Identities=35% Similarity=0.575 Sum_probs=476.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 23 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA 100 (543)
T 3ruv_A 23 MNILAGRIIAETVRSTLGPKGMDKMLVDDL--GDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVA 100 (543)
T ss_dssp HHHHHHHHHHHHHHTTCSTTCCEEEEECTT--SCEEEECCHHHHHHHSCCCCHHHHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHhhhCCCcccHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+++||+.+.++++|++++++|
T Consensus 101 ~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~~~L~~va~tsl~sK~~~~~~~~i~~livdA 177 (543)
T 3ruv_A 101 GELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEA 177 (543)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHHHHHHTCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC---HHHHHHHHHHHhcccccchhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987422 5789999999999999999999999999999
Q ss_pred HHhhccC---CCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCHH
Q 010585 162 VMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMS 237 (507)
Q Consensus 162 ~~~~~~~---~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~ 237 (507)
+.+++++ +|+++|+|++..|+++.+|++++|++|++++. ++||++++||||++++++|++++++.+ +++.+++++
T Consensus 178 v~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~k~e~~-~~v~Iss~~ 256 (543)
T 3ruv_A 178 VSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETD-AEIRITDPA 256 (543)
T ss_dssp HHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCCCCSSC-CCEEECSTT
T ss_pred HHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEcccccccccccC-ceeEeCCHH
Confidence 9999755 78889999999999999999999999999974 679999999999999999999998875 789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCC
Q 010585 238 KAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVK 317 (507)
Q Consensus 238 ~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~ 317 (507)
++.++.+.|+++++.++++|++.+++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.+
T Consensus 257 ~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~tGa~iis~l~~l~~~~ 336 (543)
T 3ruv_A 257 KLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQD 336 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCEESCGGGCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHHhCCceecccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHH
Q 010585 318 LGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVD 397 (507)
Q Consensus 318 lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~ 397 (507)
+|+|+.|++.++|+++|++|+||.+++.|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|+
T Consensus 337 LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~ 416 (543)
T 3ruv_A 337 LGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLR 416 (543)
T ss_dssp CEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHH
T ss_pred CCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHH-cCCCceeEEcCCCcccccccCCcccchHHHH
Q 010585 398 ELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQ-KEGCPAGIDVISGSVGDMAELGISESFKVKQ 476 (507)
Q Consensus 398 ~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~-~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~ 476 (507)
+++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|. .+++++|||+.+|++.||++.|||||+.||+
T Consensus 417 ~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~ 496 (543)
T 3ruv_A 417 EYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKT 496 (543)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHH
T ss_pred HHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHH
Confidence 999999999999999999999999999999999999999999999996 6678899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 477 AVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 477 ~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
++|+.|+|+|+||||||++|...|.+
T Consensus 497 ~al~~A~~~a~~iL~id~ii~~~~~~ 522 (543)
T 3ruv_A 497 QAIQSAAESTEMLLRIDDVIAAEKLR 522 (543)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEC---
T ss_pred HHHHHHHHHHHHHHhHHhheecCccC
Confidence 99999999999999999999998765
No 6
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-110 Score=885.14 Aligned_cols=492 Identities=34% Similarity=0.539 Sum_probs=474.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 15 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GDGTTtvvVLA 92 (518)
T 3iyg_D 15 SNISAAKAVADAIRTSLGPKGMDKMIQDGK--GDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIA 92 (518)
T ss_pred HHHHHHHHHHHHHHhccCCCCCceeeeCCC--CCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCCCceeHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++|+|+++||+.+.+.++|++++++|
T Consensus 93 ~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~~~l~~vA~tsl~sK~~~~~~~~i~~livdA 169 (518)
T 3iyg_D 93 GSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD---RETLLNSAATSLNSKVVSQYSSLLSPMSVDA 169 (518)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCC---hHHHHHHhHhhhccccchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987422 4789999999999999999999999999999
Q ss_pred HHhhcc-----CCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 162 VMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 162 ~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+.++++ .+|+++|+|+++.||+..||++++|++|++++.++||++++||||++++|+|++++++. +.++.++++
T Consensus 170 v~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~~-~~~i~is~~ 248 (518)
T 3iyg_D 170 VMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDM-DNQIVVSDY 248 (518)
T ss_pred HHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCccccCceEEEEEeecccccccc-CceEEecCH
Confidence 999864 36778999999999999999999999999997558999999999999999999999885 478999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEe-----CCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVN-----RQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFD 311 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~-----~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~ 311 (507)
+++..+.+.|+++++.++++|.+.|++||++ +++|++.+++||.++||++++++++.+|+|||++|||+++++++
T Consensus 249 ~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~ 328 (518)
T 3iyg_D 249 VQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVD 328 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCCEEecccc
Confidence 9999999999999999999999999999999 79999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccceEEEEEEcC-eEEEEEEccCC-CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchH
Q 010585 312 NPESVKLGHCKLIEEIMIGE-DKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPE 389 (507)
Q Consensus 312 ~l~~~~lG~~~~v~~~~ig~-~~~~~~~~~~~-~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E 389 (507)
++++.++|+|+.|++.++|+ ++|++|+||++ +++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|
T Consensus 329 ~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e 408 (518)
T 3iyg_D 329 QFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPE 408 (518)
T ss_pred cCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHH
Confidence 99999999999999999999 89999999988 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcc
Q 010585 390 MVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGIS 469 (507)
Q Consensus 390 ~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~ 469 (507)
++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|||
T Consensus 409 ~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~ 488 (518)
T 3iyg_D 409 IELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVV 488 (518)
T ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCE
Confidence 99999999999999999999999999999999999999999999999999999998777889999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 470 ESFKVKQAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 470 dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
||+.||+++|+.|+|+|+||||||++|.++
T Consensus 489 dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 489 QPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred EcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 999999999999999999999999999864
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.2e-111 Score=896.12 Aligned_cols=497 Identities=36% Similarity=0.590 Sum_probs=474.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+
T Consensus 34 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA 111 (553)
T 3ko1_A 34 ANIAAVKAVEEALKSTYGPRGMDKMLVDSL--GDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFS 111 (553)
T ss_dssp HHHHHHHHHHHHHGGGCSTTCCEEEEECTT--SCEEEECCHHHHHHSSCCCSHHHHHHHHHHHTCSSSSSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCcchhhHHHhhc--cceEEecCccchhhhhhccChhHHHHHHHhhCCcccccCCceeEEEeh
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.++ ++.|.++++|+++||+.+.++++|++++++|
T Consensus 112 ~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~e~L~~vA~tsl~sK~~~~~~~~i~~livdA 188 (553)
T 3ko1_A 112 GELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIND---TDLLRKIAMTSLSSKAVAGAREYIADIVVKA 188 (553)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTC---HHHHHHHHHHHHTTSSCCTTHHHHHHHHHHH
T ss_pred HHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCc---HHHHHHHHHHHhhHHhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987422 5789999999999999999999999999999
Q ss_pred HHhhccC------CCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 162 VMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 162 ~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
+.+++++ +|+++|+|++..|+++.+|++++|++|++++. ++||++++||||++++++|++++++.+ +++.++
T Consensus 189 v~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~Le~~k~e~~-~~v~Is 267 (553)
T 3ko1_A 189 VTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEVEKPELD-AEIRIN 267 (553)
T ss_dssp HHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSCBSCCCCTTT-CCCCCC
T ss_pred HHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEecCcccccCcccC-ceEEeC
Confidence 9998753 77889999999999999999999999999974 679999999999999999999998875 678999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCC
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~ 314 (507)
+++++.++.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|||++++++++++
T Consensus 268 s~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~~tGa~ivs~l~~l~ 347 (553)
T 3ko1_A 268 DPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEIS 347 (553)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHTTTTCCEESCGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHHHHhhCCeeecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 315 SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 315 ~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
+.++|+|+.|++.++|+++|++|+||.+++.|||+|||+|+.+++|+||+++||++++|++++++++|||||++|++++.
T Consensus 348 ~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~ 427 (553)
T 3ko1_A 348 EQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAK 427 (553)
T ss_dssp SSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHH
T ss_pred hhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCC-CceeEEcCCCcccccccCCcccchH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG-CPAGIDVISGSVGDMAELGISESFK 473 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~-~~~G~d~~~g~~~d~~~~gi~dp~~ 473 (507)
+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ +++|||+.+|++.||++.|||||+.
T Consensus 428 ~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 507 (553)
T 3ko1_A 428 KLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPAL 507 (553)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETT
T ss_pred HHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhh
Confidence 999999888999999999999999999999999999999999999999887665 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcCCCCCc
Q 010585 474 VKQAVLLSATEAAEMILRVDEIITCAPRRRE 504 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~ 504 (507)
||+++|+.|+|+|+||||||++|...|.+.+
T Consensus 508 vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 508 VKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred hhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 9999999999999999999999999876543
No 8
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=8.2e-111 Score=890.86 Aligned_cols=496 Identities=38% Similarity=0.597 Sum_probs=476.4
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+||||+|+++||+|||++++|++|++++||||||+++|+
T Consensus 27 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA 104 (548)
T 1q3q_A 27 LNILAARIIAETVRTTLGPKGMDKMLVDSL--GDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIA 104 (548)
T ss_dssp HHHHHHHHHHHHHHTTCSTTCCEEEEECTT--CCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEcCC--CCeEEECCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++++++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+|+||+.++++++|++++++|
T Consensus 105 ~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~~~l~~va~tsl~sKi~~~~~~~i~~livdA 181 (548)
T 1q3q_A 105 GELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDD---EETLLKIAATSITGKNAESHKELLAKLAVEA 181 (548)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHHHSCSSTTGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHhhccccccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986522 5789999999999999999999999999999
Q ss_pred HHhhccC------CCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 162 VMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 162 ~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
+.+++++ +|+++|+|++++|++++||++++|++|++++. ++||++++||||++++++|++++++.. +++.++
T Consensus 182 v~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~-~~v~i~ 260 (548)
T 1q3q_A 182 VKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETD-AKINIT 260 (548)
T ss_dssp HHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSC-CCEEEC
T ss_pred HHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEecCcCcccccCC-ceEEeC
Confidence 9999643 67789999999999999999999999999975 578999999999999999999999885 789999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCC
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~ 314 (507)
+++++..+.+.|+++++.++++|++.+++||+++++|++.+++||.++||++++++++++|+|||++|||++++++++++
T Consensus 261 ~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~l~~~~ 340 (548)
T 1q3q_A 261 SPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLT 340 (548)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeEecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 315 SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 315 ~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
++++|+|+.|++.++|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.
T Consensus 341 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~ 420 (548)
T 1q3q_A 341 PEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAI 420 (548)
T ss_dssp GGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHH
T ss_pred HHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKV 474 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~v 474 (507)
+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|||..+|++.||++.|||||+.|
T Consensus 421 ~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~v 500 (548)
T 1q3q_A 421 RLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRV 500 (548)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHH
T ss_pred HHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHH
Confidence 99999988899999999999999999999999999999999999999988766778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhcCCCCC
Q 010585 475 KQAVLLSATEAAEMILRVDEIITCAPRRR 503 (507)
Q Consensus 475 k~~~l~~A~e~a~~iL~iD~iI~~~~~~~ 503 (507)
|+++|+.|+|+|++|||||++|...|.++
T Consensus 501 k~~al~~A~e~a~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 501 KKQAIKSASEAAIMILRIDDVIAAKATKP 529 (548)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 99999999999999999999999987654
No 9
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=5.7e-111 Score=892.13 Aligned_cols=495 Identities=35% Similarity=0.580 Sum_probs=474.2
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+||||+|+++||+|+|++++|++|++++||||||+++|+
T Consensus 25 ~ni~a~~~la~~vkttLGP~G~~kml~~~~--g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA 102 (543)
T 1a6d_B 25 ENIEAAIAISNSVRSSLGPRGMDKMLVDSL--GDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIA 102 (543)
T ss_dssp HHHHHHHHHHHHHHTTSSTTCCCEEEECTT--CCEEEECCHHHHHHHSCCCSHHHHHHHHHHTCTTCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++++++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+|+||+.++++++|++++++|
T Consensus 103 ~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~---~~~l~~va~tsl~sKi~~~~~~~i~~livdA 179 (543)
T 1a6d_B 103 GGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADE---KALLLKMAQTSLNSKSASVAKDKLAEISYEA 179 (543)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTH---HHHHHHHHHHHHTTSGGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHhccccccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987532 5789999999999999999999999999999
Q ss_pred HHhhccC------CCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 162 VMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 162 ~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
+.+++++ +|+++|+|++++|++++||++++|++|++++. ++||++++||||++++++|++++++.. +++.++
T Consensus 180 v~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~-~~v~i~ 258 (543)
T 1a6d_B 180 VKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFD-TNLRIE 258 (543)
T ss_dssp HHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSE-EEECCC
T ss_pred HHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEecccccccccCC-ceEEeC
Confidence 9999643 57789999999999999999999999999975 578999999999999999999998875 789999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCC
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~ 314 (507)
+++++..+.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||++|||++++++++++
T Consensus 259 ~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~tGa~iis~l~~l~ 338 (543)
T 1a6d_B 259 DPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEIS 338 (543)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCceecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 315 SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 315 ~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
+.++|+|+.|++.++|+++|++|+||+++++|||+|||+|+.+++|+||+++||++++|++++++++|||||++|++++.
T Consensus 339 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~ 418 (543)
T 1a6d_B 339 SSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAF 418 (543)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHH
T ss_pred HHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKV 474 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~v 474 (507)
+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|||+.+|++.||++.|||||+.|
T Consensus 419 ~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~v 498 (543)
T 1a6d_B 419 RLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRV 498 (543)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHH
T ss_pred HHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHH
Confidence 99999988999999999999999999999999999999999999999999877778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 475 KQAVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 475 k~~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
|+++|+.|+|+|+||||||++|...|.+
T Consensus 499 k~~al~~A~e~a~~iL~id~iI~~~~~~ 526 (543)
T 1a6d_B 499 GKQAIESATEAAIMILRIDDVIATKSSS 526 (543)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccC
Confidence 9999999999999999999999988754
No 10
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-110 Score=880.94 Aligned_cols=490 Identities=30% Similarity=0.482 Sum_probs=472.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+
T Consensus 14 ~ni~a~~~la~~vkttlGPkG~~kml~~~~--g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDGTTtvvvLa 91 (517)
T 3iyg_Z 14 VNISAARGLQDVLRTNLGPKGTMKMLVSGA--GDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLII 91 (517)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCceeHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.+ ++.|.++++|+++||+.+.+.++|++++++|
T Consensus 92 ~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~----~~~L~~va~tsl~sKi~~~~~d~la~l~vda 167 (517)
T 3iyg_Z 92 GELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMD----RETLIDVARTSLRTKVHAELADVLTEAVVDS 167 (517)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCC----HHHHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988754 5789999999999999999999999999999
Q ss_pred HHhhcc---CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCHH
Q 010585 162 VMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMS 237 (507)
Q Consensus 162 ~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~ 237 (507)
+..+.+ ++|+++|+|++++||+..||++++|++|++++. +.||++++||+|++++++|++++++.+ .++.+++++
T Consensus 168 V~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~-~~~~i~~~~ 246 (517)
T 3iyg_Z 168 ILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVN-SGFFYKSAE 246 (517)
T ss_pred hheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEecccccccccccc-eeEEeCCHH
Confidence 988743 478899999999999999999999999999974 679999999999999999999999885 789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCe---------EEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeecc
Q 010585 238 KAAEIEGAEKQKMREKVQKIIAHGIN---------CFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAS 308 (507)
Q Consensus 238 ~l~~l~~~e~~~l~~~~~~i~~~~v~---------lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~ 308 (507)
++..+.+.|+++++..+++|++.+++ ||+++++|++.+++||.++||++++++++++|+|||++|||++++
T Consensus 247 ~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~tGa~iv~ 326 (517)
T 3iyg_Z 247 EREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLACGGIALN 326 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHHhCCEEec
Confidence 99999999999999999999988876 599999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCC-ccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCc
Q 010585 309 TFDNPESVK-LGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGW 387 (507)
Q Consensus 309 ~l~~l~~~~-lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~ 387 (507)
+++++++.+ +|+|+ |++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++||++++|++++++++|||||+
T Consensus 327 ~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa 405 (517)
T 3iyg_Z 327 SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGA 405 (517)
T ss_pred chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccH
Confidence 999999999 99999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCC
Q 010585 388 PEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELG 467 (507)
Q Consensus 388 ~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~g 467 (507)
+|++++.+|++++.+.++++|+++++|++||+.+|+||++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|
T Consensus 406 ~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~g 485 (517)
T 3iyg_Z 406 VEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAG 485 (517)
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhcc
Confidence 99999999999999899999999999999999999999999999999999999999987788999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 468 ISESFKVKQAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 468 i~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
||||+.||+++|+.|+|+|+||||||++|.+.
T Consensus 486 I~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 517 (517)
T 3iyg_Z 486 IWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 517 (517)
T ss_pred CeecHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999763
No 11
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1e-111 Score=897.19 Aligned_cols=500 Identities=35% Similarity=0.535 Sum_probs=477.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|++||||+||+|||+++. |+++|||||+||||+|+++||+|+|++++|++|++++||||||+++||
T Consensus 28 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA 105 (550)
T 3p9d_G 28 SNINACVAVQEALKPTLGPLGSDILIVTSN--QKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILA 105 (550)
T ss_dssp HHHHHHHHHHTTTGGGSTTTCCCEEEECSS--SCEEEECCHHHHTTTSCCCSHHHHHHHHHHHHHHTTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEECCC--CCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhhhhCCCceehHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.++..+++.|.++++|+++||+.+.++++|++++++|
T Consensus 106 ~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdA 185 (550)
T 3p9d_G 106 GELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDA 185 (550)
T ss_dssp HHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999865322224679999999999999999999999999999
Q ss_pred HHhhc-cCCCcccceeeecCCCCCCCceeeeeEEEeecCC-C---CCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 162 VMRLK-GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-I---GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 162 ~~~~~-~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~---~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+.+++ +++|+++|+|++++|++++||++++|++|++++. + +||++++||+|++++++|++++++.. +++.++++
T Consensus 186 v~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le~~k~e~~-~~v~is~~ 264 (550)
T 3p9d_G 186 VLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDN-AEVRVEHV 264 (550)
T ss_dssp HHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEECSCCSCCCCSSC-EEEEECSS
T ss_pred HHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEecccccccccccc-ceeeeCCH
Confidence 99998 6789999999999999999999999999999974 2 68999999999999999999998874 78999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++.++.+.|++++++++++|++.+++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.
T Consensus 265 ~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~tGa~iis~l~~l~~~ 344 (550)
T 3p9d_G 265 EDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPE 344 (550)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHHTCCCCBSSGGGCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHHHhCCceecchhhCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEV 396 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L 396 (507)
.+|+|+.|++.++++++|++|+||+++++|||+|||+|+.+++|+||+++||++++|++++++++|||||++|++++.+|
T Consensus 345 ~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L 424 (550)
T 3p9d_G 345 HLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCL 424 (550)
T ss_dssp GCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHH
T ss_pred HcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHH
Q 010585 397 DELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQ 476 (507)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~ 476 (507)
++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|||||+.||+
T Consensus 425 ~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~ 504 (550)
T 3p9d_G 425 RDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKI 504 (550)
T ss_dssp HHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHH
T ss_pred HHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHH
Confidence 99999999999999999999999999999999999999999999999977778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHhhhcCCCCCc
Q 010585 477 AVLLSATEAAEMILRVDEIITCAPRRRE 504 (507)
Q Consensus 477 ~~l~~A~e~a~~iL~iD~iI~~~~~~~~ 504 (507)
++|+.|+|+|+||||||++|...|++++
T Consensus 505 ~al~~A~~~a~~iL~id~ii~~~~~~~~ 532 (550)
T 3p9d_G 505 NALNSATEATNLILSVDETITNKGSESA 532 (550)
T ss_dssp HHHHHHHHHHHHHHTEEEEECCCCCC--
T ss_pred HHHHHHHHHHHHHHhHHHHhhCCCcccc
Confidence 9999999999999999999999876543
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.3e-110 Score=890.17 Aligned_cols=497 Identities=35% Similarity=0.541 Sum_probs=476.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 28 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA 105 (559)
T 3p9d_A 28 QNVLATMAVANVVKSSLGPVGLDKMLVDDI--GDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIA 105 (559)
T ss_dssp HHHHHHHHHHHHTTTTSSTTCCEEEECCSS--SCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeeEeEcCC--CCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCCcchHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~-~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|++ +++|++..+ ++.|.++++|+++||+.++++++|++++++
T Consensus 106 ~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~---~e~L~~vA~tsl~sK~~~~~~~~i~~livd 182 (559)
T 3p9d_A 106 SELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLG---KETLINIAKTSMSSKIIGADSDFFSNMVVD 182 (559)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC-----CTTHHHHHHHTTSSSGGGTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHhccCcccchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999987521 357999999999999999999999999999
Q ss_pred HHHhhc-------cCCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCcccc--CccEEEeeeccccccccccCeE
Q 010585 161 AVMRLK-------GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIE--NAKILVANTAMDTDKVKIYGAR 230 (507)
Q Consensus 161 a~~~~~-------~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~--n~~I~l~~~~L~~~~~~~~~~~ 230 (507)
|+.+++ +.+++++|+|++++|++++||++++|++|++++. ++||++++ ||||++++++|++++++.+ .+
T Consensus 183 Av~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le~~k~e~~-~~ 261 (559)
T 3p9d_A 183 ALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMG-VQ 261 (559)
T ss_dssp HHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCSCCCCCTT-CC
T ss_pred HHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEeccccccccccC-ce
Confidence 999987 2477889999999999999999999999999874 67999999 9999999999999998884 78
Q ss_pred EEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeecccc
Q 010585 231 VRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTF 310 (507)
Q Consensus 231 ~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l 310 (507)
+.+++++++..+.+.|+++++.++++|++.+++||+++++|++.+++||.++||++++++++.+|+|||++|||++++++
T Consensus 262 v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TGa~iis~~ 341 (559)
T 3p9d_A 262 INIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSM 341 (559)
T ss_dssp EEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSSCCCBCCS
T ss_pred EEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhCCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ------CCCCCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccC
Q 010585 311 ------DNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFG 384 (507)
Q Consensus 311 ------~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpG 384 (507)
+++++.++|+|+.|++.++++++|++|+||.++++|||+|||+|+.+++|+||+++||++++|++++++++|||
T Consensus 342 ~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpG 421 (559)
T 3p9d_A 342 SNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPG 421 (559)
T ss_dssp CCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECT
T ss_pred ccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeC
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCC------------cee
Q 010585 385 GGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGC------------PAG 452 (507)
Q Consensus 385 GG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~------------~~G 452 (507)
||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.++++ ++|
T Consensus 422 GGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G 501 (559)
T 3p9d_A 422 GGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYG 501 (559)
T ss_dssp TTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEE
T ss_pred ccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcccccccccccccccccee
Confidence 99999999999999999999999999999999999999999999999999999999999976654 799
Q ss_pred EEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCCCCc
Q 010585 453 IDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 504 (507)
Q Consensus 453 ~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~~ 504 (507)
||+.+|++.||++.|||||+.||+++|+.|+|+|+||||||++|...|++++
T Consensus 502 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~ 553 (559)
T 3p9d_A 502 LDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPK 553 (559)
T ss_dssp ECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCC
T ss_pred EECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcccc
Confidence 9999999999999999999999999999999999999999999999877653
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=3.5e-110 Score=885.44 Aligned_cols=493 Identities=36% Similarity=0.579 Sum_probs=472.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+||||+|+++||+|+|++++|++|++++||||||+++|+
T Consensus 26 ~ni~a~~~la~~vkttLGP~G~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA 103 (545)
T 1a6d_A 26 NNIEAAKAIADAVRTTLGPKGMDKMLVDSI--GDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLS 103 (545)
T ss_dssp HHHHHHHHHHHHHHTTCSTTCCEEEEECSS--SCEEEECCHHHHHHHSCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCcHHHHHHhhhccchHHHHHHHHHHhcCCEECCChhHHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++| +.+ ++.|.++++|+|+||+.++++++|++++++|
T Consensus 104 ~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~----~~~l~~va~tsl~sKi~~~~~~~i~~livdA 178 (545)
T 1a6d_A 104 GELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STD----DATLRKIALTALSGKNTGLSNDFLADLVVKA 178 (545)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCC----HHHHHHHHHHHTTTSSCCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCC----HHHHHHHHHHHHhcccccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 512 5789999999999999999999999999999
Q ss_pred HHhhccC------CCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEc
Q 010585 162 VMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVD 234 (507)
Q Consensus 162 ~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~ 234 (507)
+.+++++ +|+++|+|++++|++++||++++|++|++++. ++||++++||||++++++|++++++.. +++.++
T Consensus 179 v~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~-~~v~i~ 257 (545)
T 1a6d_A 179 VNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIE-AKVQIS 257 (545)
T ss_dssp HHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBSCCCCSSC-CEEEEC
T ss_pred HHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecCCCcccccCC-ceEEeC
Confidence 9999643 67789999999999999999999999999975 578999999999999999999999885 789999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCC
Q 010585 235 SMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPE 314 (507)
Q Consensus 235 ~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~ 314 (507)
+++++..+.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||++|||++++++++++
T Consensus 258 ~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~ 337 (545)
T 1a6d_A 258 DPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLT 337 (545)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCeeecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 315 SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 315 ~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
++++|+|+.|++.++|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.
T Consensus 338 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~ 417 (545)
T 1a6d_A 338 PSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAM 417 (545)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHH
T ss_pred HHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKV 474 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~v 474 (507)
+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|||..+|++.||++.|||||+.|
T Consensus 418 ~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~v 497 (545)
T 1a6d_A 418 RLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRV 497 (545)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHH
T ss_pred HHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHH
Confidence 99999998999999999999999999999999999999999999999999877778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 475 KQAVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 475 k~~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
|+++|+.|+|+|++|||||++|...|++
T Consensus 498 k~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 498 KTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999999999999987754
No 14
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-108 Score=869.23 Aligned_cols=493 Identities=35% Similarity=0.535 Sum_probs=471.8
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 14 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA 91 (515)
T 3iyg_E 14 SHIMAAKAVANTMKTSLGPNGLDKMMVDKD--GDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLA 91 (515)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEEcCC--CCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCchhHHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.+. ..++.|.++++|+++||+.+.+.++|++++++|
T Consensus 92 ~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~-~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~da 170 (515)
T 3iyg_E 92 GALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDM-KNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNA 170 (515)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCc-cCHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999886421 114789999999999999888999999999999
Q ss_pred HHhhcc----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 162 VMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 162 ~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+..+.. ++|+++|+|++++||+++||++++|++|++++. ++||+.++||+|++++|+|++.+++.. +++.++++
T Consensus 171 v~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~-~~~~is~~ 249 (515)
T 3iyg_E 171 VLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTK-HKLDVTSV 249 (515)
T ss_pred HHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCcccccccccc-ceeeeCCH
Confidence 998853 477889999999999999999999999999974 679999999999999999999988774 77899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++..+.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.
T Consensus 250 ~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~l~~l~~~ 329 (515)
T 3iyg_E 250 EDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFSELTAE 329 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEecccccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcC--eEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHH
Q 010585 317 KLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAK 394 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~ 394 (507)
++|+|+.|+++++|+ ++|++|+||++++.|||+|||+|+.+++|+||+++||++++|++++++++|||||++|++++.
T Consensus 330 ~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~ 409 (515)
T 3iyg_E 330 KLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCAL 409 (515)
T ss_pred HCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Confidence 999999999999997 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHc-CCCceeEEcCCCcccccccCCcccchH
Q 010585 395 EVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-EGCPAGIDVISGSVGDMAELGISESFK 473 (507)
Q Consensus 395 ~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~-~~~~~G~d~~~g~~~d~~~~gi~dp~~ 473 (507)
+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. +++++|||+.+|++.||++.|||||+.
T Consensus 410 ~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 489 (515)
T 3iyg_E 410 AVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLI 489 (515)
T ss_pred HHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHH
Confidence 9999999999999999999999999999999999999999999999999975 457899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 474 VKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
||+++|+.|+|+|+||||||++|.+
T Consensus 490 vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 490 GKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 9999999999999999999999976
No 15
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=6.2e-111 Score=889.80 Aligned_cols=502 Identities=63% Similarity=0.961 Sum_probs=475.6
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccc-cCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQS-TGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL 80 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~-~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL 80 (507)
+|+.||+.|+++|+|||||+||+|||++ +. |+++|||||+||||+|+++||+|+|++++|++|++++||||||+++|
T Consensus 21 ~ni~a~~~la~~vkttLGPkG~~kml~~~~~--G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~qd~~~GDGTTtavVL 98 (527)
T 3p9d_B 21 SAFVGAIAVGDLVKSTLGPKGMDKLLQSASS--NTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVL 98 (527)
T ss_dssp HHHHHHHHHHHHHHSCSSSSCCEEEEECTTT--CCEECCCCHHHHHHTCCCCCHHHHHHHHHHHHHHHHTCSCTTTTTHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEecCC--CCeEEeCCHHHHHHHhccCCHHHHHHHHHHHHhHhhhCCcHhHHHHH
Confidence 6999999999999999999999999999 76 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc-CCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 81 AGELLREAEKLVAA-KIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 81 ~~~Ll~~~~~li~~-gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
|++||+++++++.+ |+||+.|++||++|++.+++.|+++++|++.+.+.+++.|.++++|+++||+.+.++++|+++++
T Consensus 99 A~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~ 178 (527)
T 3p9d_B 99 SAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELAT 178 (527)
T ss_dssp HHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999998765434457899999999999999999999999999
Q ss_pred HHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCHHHH
Q 010585 160 DAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKA 239 (507)
Q Consensus 160 ~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l 239 (507)
+|+.++++++|++.|+|+++.||++.||++++|++|++++.+.+|++++||||++++|+|++++++..+.++.+++++++
T Consensus 179 dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l 258 (527)
T 3p9d_B 179 NAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKL 258 (527)
T ss_dssp HHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSCCSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHH
T ss_pred HHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCCCeeeecceEEEeccccccccccccCceEEEcCHHHH
Confidence 99999998888889999999999999999999999999986555889999999999999999998843467789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCcc
Q 010585 240 AEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLG 319 (507)
Q Consensus 240 ~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG 319 (507)
..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|
T Consensus 259 ~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG 338 (527)
T 3p9d_B 259 AQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLG 338 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEecchhhCCHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHH
Q 010585 320 HCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDEL 399 (507)
Q Consensus 320 ~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~ 399 (507)
+|+.|++..+++++|++|+||+++++|||+|||+|+.+++|+||+++||++++|++++++++|||||++|++++.+|+++
T Consensus 339 ~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 418 (527)
T 3p9d_B 339 ECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTE 418 (527)
T ss_dssp CSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHH
T ss_pred CCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHH
Q 010585 400 ARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVL 479 (507)
Q Consensus 400 ~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l 479 (507)
+.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|||||+.||+++|
T Consensus 419 ~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 498 (527)
T 3p9d_B 419 AQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVV 498 (527)
T ss_dssp HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHH
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHH
Confidence 98889999999999999999999999999999999999999999987778899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHhhhcCCCCCcC
Q 010585 480 LSATEAAEMILRVDEIITCAPRRRED 505 (507)
Q Consensus 480 ~~A~e~a~~iL~iD~iI~~~~~~~~~ 505 (507)
+.|+|+|+||||||++|...|+++++
T Consensus 499 ~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 499 SSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp HHHHHHHHHHHHCCEEEEEC------
T ss_pred HHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 99999999999999999998876543
No 16
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3e-108 Score=866.35 Aligned_cols=490 Identities=28% Similarity=0.436 Sum_probs=466.2
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|++||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+
T Consensus 15 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA 92 (512)
T 3iyg_Q 15 RNIQACKELAQTTRTAYGPNGMNKMVINHL--EKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFA 92 (512)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhHHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhccc--ccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV--DNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAV 159 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~--~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~ 159 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++ +.+..+ ++.|.++++|+++||+.+ ++++|+++++
T Consensus 93 ~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~---~~~l~~va~tsl~sK~~~-~~~~i~~liv 168 (512)
T 3iyg_Q 93 GALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRD---VDEVSSLLHTSVMSKQYG-NEVFLAKLIA 168 (512)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC---HHHHHHHHHHHhCCCCcc-chHHHHHHHH
Confidence 9999999999999999999999999999999999999854 222211 478999999999999865 6899999999
Q ss_pred HHHHhhcc---CCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 160 DAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 160 ~a~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+|+.++++ .+++++|+|.+..|+++.+|++++|++|++++. +||+.++|++|+++++||++.+++.. .++.++++
T Consensus 169 dAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~-~~~~~~~n~kI~ll~~~le~~~~e~k-~~v~Is~~ 246 (512)
T 3iyg_Q 169 QACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETE-GDVTSVKDAKIAVYSCPFDGMITETK-GTVLIKSA 246 (512)
T ss_pred HHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcC-CCCcccccCceEEEeccccccccccc-ceEEeCCH
Confidence 99999864 367889999999999999999999999999984 49999999999999999999888875 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCC
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESV 316 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~ 316 (507)
+++.++.+.|++++++++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.
T Consensus 247 ~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis~l~~~~~~ 326 (512)
T 3iyg_Q 247 EELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLE 326 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEEEcCeEEEEEEccC-CCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHH
Q 010585 317 KLGHCKLIEEIMIGEDKLIHFSGVE-MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKE 395 (507)
Q Consensus 317 ~lG~~~~v~~~~ig~~~~~~~~~~~-~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~ 395 (507)
++|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+
T Consensus 327 ~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~ 406 (512)
T 3iyg_Q 327 EMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQ 406 (512)
T ss_pred HCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHH
Confidence 9999999999999999999999996 478999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCC--cccccccCCcccchH
Q 010585 396 VDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG--SVGDMAELGISESFK 473 (507)
Q Consensus 396 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g--~~~d~~~~gi~dp~~ 473 (507)
|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||..+| ++.||++.|||||+.
T Consensus 407 L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~ 486 (512)
T 3iyg_Q 407 ITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYL 486 (512)
T ss_pred HHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHH
Confidence 999999899999999999999999999999999999999999999999987888999999965 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 474 VKQAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 474 vk~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
||+++|+.|+|+|+||||||++|.++
T Consensus 487 vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 487 GKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred HHHHHHHHHHHHHHHHHhHhHheecC
Confidence 99999999999999999999999763
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=4e-110 Score=881.87 Aligned_cols=492 Identities=32% Similarity=0.513 Sum_probs=473.5
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+++|++++|++|++++||||||+++|+
T Consensus 23 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA 100 (528)
T 3p9d_D 23 ANIIAARSVADAIRTSLGPKGMDKMIKTSR--GEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILT 100 (528)
T ss_dssp HHHHHHHHHHHHHTTTSSTTCCCEEEECSS--CCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHHHTCSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+++||+.++++++|++++++|
T Consensus 101 ~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~e~l~~va~tsl~sK~~~~~~~~i~~livdA 177 (528)
T 3p9d_D 101 GALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSD---REQLVRAASTSLSSKIVSQYSSFLAPLAVDS 177 (528)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC---HHHHHHHHHHHSCSSSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCC---HHHHHHHHHHHhcCCccchhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987422 5789999999999999999999999999999
Q ss_pred HHhhcc----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CC-CCccccCccEEEeeeccccccccccCeEEEEcC
Q 010585 162 VMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IG-QPKRIENAKILVANTAMDTDKVKIYGARVRVDS 235 (507)
Q Consensus 162 ~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~-~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~ 235 (507)
+.++++ .+++++|+|++++|++++||++++|++|++++. +. ||++++||||++++++|++++++.+ +++.+++
T Consensus 178 v~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~-~~i~i~~ 256 (528)
T 3p9d_D 178 VLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTE-NNIIVND 256 (528)
T ss_dssp HHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSE-EEEEESS
T ss_pred HHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccccccccccC-ceEEeCC
Confidence 999864 467889999999999999999999999999974 45 9999999999999999999998874 7899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCC-----CchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeecccc
Q 010585 236 MSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTF 310 (507)
Q Consensus 236 ~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i-----~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l 310 (507)
++++..+.+.|+++++.++++|.+.+++||+++++| ++.+++||.++||++++++++++|+|||++|||++++++
T Consensus 257 ~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~ 336 (528)
T 3p9d_D 257 YRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADI 336 (528)
T ss_dssp SSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCCEEeccc
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccceEEEEEEcCeEEEEEEccC--C-CceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCc
Q 010585 311 DNPESVKLGHCKLIEEIMIGEDKLIHFSGVE--M-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGW 387 (507)
Q Consensus 311 ~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~--~-~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~ 387 (507)
+++++.++|+|+.|++.++|+++|++|++|+ + +++|||+|||+|+.+++|.||+++||++++|++++++++|||||+
T Consensus 337 ~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa 416 (528)
T 3p9d_D 337 ELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGA 416 (528)
T ss_dssp TTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTH
T ss_pred ccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCH
Confidence 9999999999999999999999999999998 6 889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCC
Q 010585 388 PEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELG 467 (507)
Q Consensus 388 ~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~g 467 (507)
+|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|
T Consensus 417 ~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~g 496 (528)
T 3p9d_D 417 PEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEH 496 (528)
T ss_dssp HHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHC
T ss_pred HHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhcc
Confidence 99999999999988889999999999999999999999999999999999999988877778899999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhhhHhhhcC
Q 010585 468 ISESFKVKQAVLLSATEAAEMILRVDEIITCA 499 (507)
Q Consensus 468 i~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 499 (507)
||||+.||+++|+.|+|+|+||||||++|.++
T Consensus 497 I~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 497 ILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred CeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999999999999999864
No 18
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.6e-109 Score=881.32 Aligned_cols=494 Identities=28% Similarity=0.473 Sum_probs=467.7
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|++||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 23 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA 100 (590)
T 3p9d_C 23 SNITAAKAVADVIRTCLGPKAMLKMLLDPM--GGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILA 100 (590)
T ss_dssp TTHHHHHHHHHHSTTTCSSSCCCCEEECTT--TCCBCCCCHHHHHHHSCCCCHHHHTHHHHTTTHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEECCHHHHHHHhhCCCHHHHHHHHHHHhhhhhhCCCccchHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKL-VAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~l-i~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||++|.++ +.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+|+||+.++++++|++++++
T Consensus 101 ~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~e~L~~vA~tslsSK~~~~~~~~i~~livd 177 (590)
T 3p9d_C 101 GEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEN---DAAMKKLIQASIGTKYVIHWSEKMCELALD 177 (590)
T ss_dssp HHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCC---THHHHHHHTTTSTTSTTGGGHHHHHHHHHH
T ss_pred HHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC---HHHHHHHHHHHHhcccccccHHHHHHHHHH
Confidence 9999999999 999999999999999999999999999999987532 368999999999999999999999999999
Q ss_pred HHHhhccC------------CCcc-cceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccc
Q 010585 161 AVMRLKGS------------TNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKI 226 (507)
Q Consensus 161 a~~~~~~~------------~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~ 226 (507)
|+.+++++ +|++ +|+|++++||+++||++++|++|++++. +.||++++||||++++++|++++++.
T Consensus 178 Av~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~kIll~d~~Le~~K~e~ 257 (590)
T 3p9d_C 178 AVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGES 257 (590)
T ss_dssp HHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESCCEECCCCCCSCCCCTT
T ss_pred HHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeeeEEEEEccccccccccc
Confidence 99998653 2333 6999999999999999999999999864 46999999999999999999999887
Q ss_pred cCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCee
Q 010585 227 YGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEI 306 (507)
Q Consensus 227 ~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~i 306 (507)
++++.+++++++.++.+.|++++++++++|++.+++||+++++|++.+++||.++||++++++++.+|+|||++|||++
T Consensus 258 -~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~~k~~le~ia~~TGa~i 336 (590)
T 3p9d_C 258 -QTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATI 336 (590)
T ss_dssp -TEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCCCHHHHHHHHHHHTCCC
T ss_pred -CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccCCHHHHHHHHHHhCCce
Confidence 4788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccc-cceEEEEEEcCeEEEEEEccCCCce----------------------------------------
Q 010585 307 ASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQA---------------------------------------- 345 (507)
Q Consensus 307 i~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~---------------------------------------- 345 (507)
+++++++++.++|+ |+.|++..+++++|++|+||.+++.
T Consensus 337 is~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~ 416 (590)
T 3p9d_C 337 VNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGAL 416 (590)
T ss_dssp CSCSTTCCTTSCBCCCSEEECCEETTEECEEECC----------------------------------------------
T ss_pred eecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhc
Confidence 99999999999999 9999999999999999999987666
Q ss_pred ----------------eEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHH
Q 010585 346 ----------------CTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSH 409 (507)
Q Consensus 346 ----------------~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~ 409 (507)
|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|++++...++++|+
T Consensus 417 ~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 496 (590)
T 3p9d_C 417 GSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQW 496 (590)
T ss_dssp -----------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHH
T ss_pred cCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHH
Q 010585 410 AIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMI 489 (507)
Q Consensus 410 ~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~i 489 (507)
++++|++||+.||++|++|||+|+.+++.+|+..|..+++++|||+.+|++.||++.|||||+.||+++|+.|+|+|+||
T Consensus 497 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 576 (590)
T 3p9d_C 497 PYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLL 576 (590)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999877888999999999999999999999999999999999999999
Q ss_pred HhhhHhhhcCCC
Q 010585 490 LRVDEIITCAPR 501 (507)
Q Consensus 490 L~iD~iI~~~~~ 501 (507)
||||++|...|.
T Consensus 577 L~id~ii~~~~~ 588 (590)
T 3p9d_C 577 LRVDDIVSGVRK 588 (590)
T ss_dssp TSEEEEECCCC-
T ss_pred HHHHHHHhcCCC
Confidence 999999988764
No 19
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2e-110 Score=890.38 Aligned_cols=495 Identities=28% Similarity=0.451 Sum_probs=460.3
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+
T Consensus 30 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa 107 (568)
T 3p9d_H 30 KSIAAIRELHQMCLTSMGPCGRNKIIVNHL--GKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILA 107 (568)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCEEEEECTT--SCEEEESCHHHHTTTCCCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHcccCCHHHHHHHHHHHhhhceeCCCceehHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||+++.+++.+|+||+.|++||+.|++.+++.|+++++++..+. ..++.|.++++|+++||+.+++ ++|++++++|
T Consensus 108 ~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~-~~~~~l~~va~tsl~sK~~~~~-~~i~~livdA 185 (568)
T 3p9d_H 108 GELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDK-NDKNELLKMIKPVISSKKYGSE-DILSELVSEA 185 (568)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCC-CTTHHHHHHHHHHHTTTSTTCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC-CCHHHHHHHHHHHhhccCcchH-HHHHHHHHHH
Confidence 9999999999999999999999999999999999999998763210 0147899999999999998887 9999999999
Q ss_pred HHhhcc---------CCCcccceeeecCCCCCCCceeeeeEEEeecCCCCCCcccc---CccEEEeeeccccccccccCe
Q 010585 162 VMRLKG---------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIE---NAKILVANTAMDTDKVKIYGA 229 (507)
Q Consensus 162 ~~~~~~---------~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~---n~~I~l~~~~L~~~~~~~~~~ 229 (507)
+.++++ ++|+++|+|++++|++++||++++|++|++++ ..||++++ ||||++++|+|++++++.+ +
T Consensus 186 v~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~-~~m~~~i~~~~n~kIlll~~~Le~~k~e~~-~ 263 (568)
T 3p9d_H 186 VSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREP-EGHVKSLSEDKKHKVAVFTCPLDIANTETK-G 263 (568)
T ss_dssp HTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCB-SSGGGSCCCCSSCEEEEECSCSSSCCCSSS-C
T ss_pred HHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecc-cCCcEEEecCCcceEEEEccCccccccccC-c
Confidence 999865 36788999999999999999999999999987 47899999 9999999999999998875 7
Q ss_pred EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccc
Q 010585 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAST 309 (507)
Q Consensus 230 ~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~ 309 (507)
++.+++++++.++.+.|+++++.++++|++.+++||+++++|++.+++||.++||++++++++.+|+|||++|||+++++
T Consensus 264 ~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~~tGa~ivs~ 343 (568)
T 3p9d_H 264 TVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPR 343 (568)
T ss_dssp EEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSS
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHHhCCEEEec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccceEEEEEEcCeEEEEEEccC--CCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhh--CCccccCC
Q 010585 310 FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE--MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVN--DSRVLFGG 385 (507)
Q Consensus 310 l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~--~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~--~~~vvpGG 385 (507)
++++++.++|+|+.|++.++|+++|++|++|+ ++++|||+|||+|+.+++|.||+++||++++|++++ ++++||||
T Consensus 344 l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGG 423 (568)
T 3p9d_H 344 LGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGA 423 (568)
T ss_dssp SSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTT
T ss_pred cccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCC
Confidence 99999999999999999999999999999998 689999999999999999999999999999999999 99999999
Q ss_pred CchHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHc--------CCCceeEEcCC
Q 010585 386 GWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK--------EGCPAGIDVIS 457 (507)
Q Consensus 386 G~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~--------~~~~~G~d~~~ 457 (507)
|++|++|+.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|+..|.. +++++|||+.+
T Consensus 424 Ga~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~ 503 (568)
T 3p9d_H 424 GATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDG 503 (568)
T ss_dssp THHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHH
T ss_pred cHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccC
Confidence 9999999999999999999999999999999999999999999999999999999998865 55789999999
Q ss_pred Cc---ccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCCC
Q 010585 458 GS---VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 502 (507)
Q Consensus 458 g~---~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~ 502 (507)
|+ +.||++.|||||+.||+++|+.|+|+|+||||||++|.++|..
T Consensus 504 g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 551 (568)
T 3p9d_H 504 ESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAG 551 (568)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC-------------
T ss_pred CCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Confidence 97 9999999999999999999999999999999999999998765
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.3e-108 Score=875.35 Aligned_cols=497 Identities=35% Similarity=0.555 Sum_probs=471.7
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 49 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA 126 (562)
T 3p9d_E 49 SHILAARSVASIIKTSLGPRGLDKILISPD--GEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLA 126 (562)
T ss_dssp HHHHHHHHHHHHTTTSSSTTCCEEEEECSS--SCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCEEEECCHHHHHHHccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHH
Confidence 689999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCCh-hhhHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENA-ETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVD 160 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~ 160 (507)
++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++.+. +.+++.|.++++|+++||+.+.+.++|++++++
T Consensus 127 ~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vd 206 (562)
T 3p9d_E 127 SALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVE 206 (562)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887542 122468999999999999999999999999999
Q ss_pred HHHhhcc----CCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccc------cCccEEEeeeccccccccccCe
Q 010585 161 AVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRI------ENAKILVANTAMDTDKVKIYGA 229 (507)
Q Consensus 161 a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~------~n~~I~l~~~~L~~~~~~~~~~ 229 (507)
|+..+.+ ++|+++|+|++++|++++||++++|++|++++. ++||+.+ +|++|++++|+|++.+++.. +
T Consensus 207 AV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~-~ 285 (562)
T 3p9d_E 207 AVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTK-H 285 (562)
T ss_dssp HHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSC-C
T ss_pred HheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEEEecccccccccccC-c
Confidence 9998853 578899999999999999999999999999974 5789888 99999999999999988764 6
Q ss_pred EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccc
Q 010585 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAST 309 (507)
Q Consensus 230 ~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~ 309 (507)
++.+++++++..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++++|+|||++|||+++++
T Consensus 286 ~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~ 365 (562)
T 3p9d_E 286 KLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPR 365 (562)
T ss_dssp CCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEES
T ss_pred eEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEec
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccceEEEEEEcC--eEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCc
Q 010585 310 FDNPESVKLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGW 387 (507)
Q Consensus 310 l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~ 387 (507)
++++++.++|+|+.|++.++|+ ++|++|+||++++.|||+|||+|+.+++|.||+++||++++|++++++++|||||+
T Consensus 366 l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa 445 (562)
T 3p9d_E 366 FQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGA 445 (562)
T ss_dssp SSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTH
T ss_pred cccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcH
Confidence 9999999999999999999985 89999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHc-CCCceeEEcCCCcccccccC
Q 010585 388 PEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-EGCPAGIDVISGSVGDMAEL 466 (507)
Q Consensus 388 ~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~-~~~~~G~d~~~g~~~d~~~~ 466 (507)
+|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. +++++|||+.+|++.||++.
T Consensus 446 ~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~ 525 (562)
T 3p9d_E 446 AEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKEL 525 (562)
T ss_dssp HHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTT
T ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhc
Confidence 99999999999999999999999999999999999999999999999999999999875 45789999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCC
Q 010585 467 GISESFKVKQAVLLSATEAAEMILRVDEIITCAPR 501 (507)
Q Consensus 467 gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~ 501 (507)
|||||+.||+++|+.|+|+|+||||||++|.+++.
T Consensus 526 gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 526 FVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred cCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999998754
No 21
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5.1e-109 Score=877.74 Aligned_cols=498 Identities=27% Similarity=0.433 Sum_probs=471.4
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLA 81 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~ 81 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||
T Consensus 21 ~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA 98 (546)
T 3p9d_F 21 VNVTSAEGLQSVLETNLGPKGTLKMLVDGA--GNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLV 98 (546)
T ss_dssp HHHHHHTHHHHHHTTTSSTTCCEEEEECTT--SCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCcccHHHHH
Confidence 699999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 010585 82 GELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 161 (507)
Q Consensus 82 ~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a 161 (507)
++||++|.+++.+|+||+.|++||++|++.+++.|+++++|++.+. ..++.|.++++|+++||+.+.+.++|++++++|
T Consensus 99 ~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~-~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vda 177 (546)
T 3p9d_F 99 GELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLS-NDREFLLQVARSSLLTKVDADLTEVLTPIVTDA 177 (546)
T ss_dssp HHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSS-TTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccc-cCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999886310 014789999999999999999999999999999
Q ss_pred HHhhc----cCCCcccceeeecCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCH
Q 010585 162 VMRLK----GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSM 236 (507)
Q Consensus 162 ~~~~~----~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~ 236 (507)
+..+. .++|+++|+|++++||+..||++++|++|++++. +.||++++||+|++++|+|++++++.+ +++.++++
T Consensus 178 V~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~~-~~~~i~~~ 256 (546)
T 3p9d_F 178 VLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVN-SGFFYSSA 256 (546)
T ss_dssp HHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSSC-BCCCCCSS
T ss_pred heEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecCcccccccccC-ceEEEcCH
Confidence 99874 3588999999999999999999999999999974 679999999999999999999999885 77999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC----------CeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCee
Q 010585 237 SKAAEIEGAEKQKMREKVQKIIAHG----------INCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEI 306 (507)
Q Consensus 237 ~~l~~l~~~e~~~l~~~~~~i~~~~----------v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~i 306 (507)
+++..+.+.|+++++++++.|++.+ ++||+++++|++.+++||.++||++++|+++++|+|||++|||++
T Consensus 257 ~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~leria~~tGa~i 336 (546)
T 3p9d_F 257 DQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEA 336 (546)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHHHHHTTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCCHHHHHHHHHHhCCEE
Confidence 9999999999999999999998754 249999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccceEEEEEEcCeEEEEEEccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCC
Q 010585 307 ASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 386 (507)
Q Consensus 307 i~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG 386 (507)
+++++++++.++|+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|+||+++||++++|++++++++|||||
T Consensus 337 i~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGG 416 (546)
T 3p9d_F 337 QNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAG 416 (546)
T ss_dssp CCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTT
T ss_pred ecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHH---HhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHHc-----CCCceeEEcCCC
Q 010585 387 WPEMVMAKEVDE---LARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-----EGCPAGIDVISG 458 (507)
Q Consensus 387 ~~E~~la~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~-----~~~~~G~d~~~g 458 (507)
++|++++.+|++ ++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. +++++|||+.+|
T Consensus 417 a~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g 496 (546)
T 3p9d_F 417 AFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIG 496 (546)
T ss_dssp HHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTT
T ss_pred HHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCC
Confidence 999999999999 588889999999999999999999999999999999999999998873 456899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhcCCCCC
Q 010585 459 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRR 503 (507)
Q Consensus 459 ~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~~~~ 503 (507)
++.||++.|||||+.||+++|+.|+|+|+||||||++|.+++...
T Consensus 497 ~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~ 541 (546)
T 3p9d_F 497 DSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTL 541 (546)
T ss_dssp BCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSC
T ss_pred eecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 999999999999999999999999999999999999999887643
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.9e-103 Score=825.24 Aligned_cols=473 Identities=34% Similarity=0.552 Sum_probs=380.8
Q ss_pred cccccCCCCceEEecChHHHhhhccccChHhHHHHHHHhhcccccCCCchHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Q 010585 26 ILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGF 105 (507)
Q Consensus 26 ~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~i~~g~ 105 (507)
||+++. |+++|||||+||||+|+++||+|||++++|++|++++||||||+++|+++||+++.+++.+|+||+.|++||
T Consensus 1 mlv~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~ 78 (500)
T 3aq1_B 1 MLVDSM--GDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGY 78 (500)
T ss_dssp --------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred CccCCC--CCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 678886 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhccC------CC-cccceeee
Q 010585 106 RMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS------TN-LESIQIIK 178 (507)
Q Consensus 106 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~lv~~a~~~~~~~------~~-~~~I~i~~ 178 (507)
++|++.+++.|+++++|++..+ ++.|.++++|+|+||+.++++++|++++++|+.+++++ +| +++|+|++
T Consensus 79 ~~A~~~a~~~L~~~s~~v~~~d---~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k 155 (500)
T 3aq1_B 79 RHAAEKCREILETITIAISPDD---EAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEK 155 (500)
T ss_dssp HHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCc---HHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEE
Confidence 9999999999999999986422 57899999999999999999999999999999999754 44 67899999
Q ss_pred cCCCCCCCceeeeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHH
Q 010585 179 KPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKI 257 (507)
Q Consensus 179 ~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i 257 (507)
++|+++++|++++|++|++++. ++||++++||||++++++|++++++.. +++.+++++++..+.+.|+++++.++++|
T Consensus 156 ~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I 234 (500)
T 3aq1_B 156 RAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVD-SEIKITSPGQMQLFLDQEEKMMREMAEKV 234 (500)
T ss_dssp EESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC--------------------------CHHHHHHHHH
T ss_pred ecCCCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccc-eeEeeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999975 679999999999999999999998884 78999999999999999999999999999
Q ss_pred HHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEE
Q 010585 258 IAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHF 337 (507)
Q Consensus 258 ~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~ 337 (507)
.+.+++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+|+.|++.++|+++|++|
T Consensus 235 ~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~ 314 (500)
T 3aq1_B 235 IASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYV 314 (500)
T ss_dssp HTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEE
T ss_pred HHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 338 SGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 338 ~~~~~~~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 315 ~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~A 394 (500)
T 3aq1_B 315 TGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEA 394 (500)
T ss_dssp EEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred ECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++.+|+..|..++.++|||..+|++.||++.|||||+.||+++|+.|+|+|+||||||++|.
T Consensus 395 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~ 474 (500)
T 3aq1_B 395 LEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVA 474 (500)
T ss_dssp TTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999987777899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCc
Q 010585 498 CAPRRRE 504 (507)
Q Consensus 498 ~~~~~~~ 504 (507)
..|.+++
T Consensus 475 ~~~~~~~ 481 (500)
T 3aq1_B 475 SKGSANQ 481 (500)
T ss_dssp -------
T ss_pred cCccCCC
Confidence 9876543
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.4e-93 Score=753.53 Aligned_cols=451 Identities=25% Similarity=0.374 Sum_probs=415.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+||+|+|+++|| +|||++++|++|++++||||||+
T Consensus 14 ~~~~~~~~la~~vkttLGPkG~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtv 91 (543)
T 1we3_A 14 ALERGVNAVANAVKVTLGPRGRNVVLEKKF--GSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTA 91 (543)
T ss_dssp HHHHHHHHHHHHHGGGCSTTCCEEEECCSS--SSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheecCCCcchH
Confidence 689999999999999999999999999997 999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++. ++.|.+++++++ + +++++++
T Consensus 92 vVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~~~l~~vA~iS~------~-~~~i~~l 159 (543)
T 1we3_A 92 TVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVED-----RKAIEEVATISA------N-DPEVGKL 159 (543)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHH------T-CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----HHHHHHhhhhhc------C-CHHHHHH
Confidence 999999999999999999999999999999999999999999999863 478999998764 2 7889999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCc-eeeeeEEEeecCCC--------CCCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+.+++++. .|.|. +|+++++| ++++|++|++++.+ .|++.++||+|+++++.
T Consensus 160 i~dAv~~V~~~g---~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~---------- 224 (543)
T 1we3_A 160 IADAMEKVGKEG---IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK---------- 224 (543)
T ss_dssp HHHHHHTTCTTS---EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSC----------
T ss_pred HHHHHHHhCcCC---cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCC----------
Confidence 999999997653 35554 89999999 99999999999742 36778999999999974
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHc------CCeEEe-----cCChhhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIE-----HADFDGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~------~I~~i~-----~v~~~~L~~ 297 (507)
+++.+++. .+++++.+.++++|+++++|++.++++|..+ +|++++ ++++++|+|
T Consensus 225 ----Is~~~~l~-----------~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ 289 (543)
T 1we3_A 225 ----VSNVRELL-----------PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKD 289 (543)
T ss_dssp ----BCCHHHHH-----------HHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHH
T ss_pred ----cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHH
Confidence 34455542 4677889999999999999999999999884 668887 888899999
Q ss_pred HHHHhCCeeccc-----cCCCCCCCccccceEEEEEEcCeEEEEEEccCCC-----------------------------
Q 010585 298 LALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG----------------------------- 343 (507)
Q Consensus 298 ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------- 343 (507)
||++|||+++++ ++++++.++|+|+.|+ ++.+++++|+||.++
T Consensus 290 ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~er 366 (543)
T 1we3_A 290 IAAVTGGTVISEELGFKLENATLSMLGRAERVR---ITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQER 366 (543)
T ss_dssp HHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEE---ECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHH
T ss_pred HHHHhCCceeeccccCCcccCCHHHCCCceEEE---EEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHH
Confidence 999999999996 8999999999999997 578999999998753
Q ss_pred ------ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 344 ------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 344 ------~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
++|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 367 lakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~A 445 (543)
T 1we3_A 367 LAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRA 445 (543)
T ss_dssp HHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHH
Confidence 789999999999999999999999999999999976 9999999999999999999988899999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++.+|+..| ++.++|||..+|++.||++.|||||+.||+++|+.|+|+|+|||++|++|.
T Consensus 446 Le~ip~~La~NaG~d~~~vv~~l~~~h--~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~ 523 (543)
T 1we3_A 446 LEEPARQIAENAGYEGSVIVQQILAET--KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVA 523 (543)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHCC--SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHhc--CCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999876 457899999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 010585 498 CAPRR 502 (507)
Q Consensus 498 ~~~~~ 502 (507)
..|++
T Consensus 524 ~~~~~ 528 (543)
T 1we3_A 524 EKPEK 528 (543)
T ss_dssp ECSCC
T ss_pred cCCcc
Confidence 88764
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.2e-92 Score=746.93 Aligned_cols=450 Identities=22% Similarity=0.342 Sum_probs=412.0
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
+|+.||+.|+++|++||||+||+|||+++. |+++|||||+||+|+|+++|| +|||++++|++|++++||||||+
T Consensus 14 ~~i~~~~~la~~vkttLGPkG~~kmi~~~~--G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtv 91 (547)
T 1kp8_A 14 KMLRGVNVLADAVKVTLGPKGRNVVLDKSF--GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTA 91 (547)
T ss_dssp HHHHHHHHHHHHHHTTCSTTCCEEEECCSS--SSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCCcchh
Confidence 689999999999999999999999999997 999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++++++.+|+||..|++||++|++.+++.|+++++|++. ++.|.+++++++ +++++++++
T Consensus 92 vVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~e~l~~vA~iS~------~~~~~i~~l 160 (547)
T 1kp8_A 92 TVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSD-----SKAIAQVGTISA------NSDETVGKL 160 (547)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCS-----HHHHHHHHHHHT------TSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC-----HHHHHHHHHHhc------cchhHHHHH
Confidence 999999999999999999999999999999999999999999999863 478999998764 468999999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCc-eeeeeEEEeecCCC--------CCCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+.+++++. .|.|. +|+++++| ++++|++|++++.+ .|++.++||+|+++++++
T Consensus 161 iadAv~~V~~dg---~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~I--------- 226 (547)
T 1kp8_A 161 IAEAMDKVGKEG---VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI--------- 226 (547)
T ss_dssp HHHHHHHHCTTS---EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEE---------
T ss_pred HHHHHHHhCcCC---cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcC---------
Confidence 999999997653 35554 89999999 99999999999742 367789999999999743
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHc------CCeEEe-----cCChhhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIE-----HADFDGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~------~I~~i~-----~v~~~~L~~ 297 (507)
++++++. .+++++.+.++++++++++|++.++++|..+ +|++++ ++++++|+|
T Consensus 227 -----s~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ 290 (547)
T 1kp8_A 227 -----SNIREML-----------PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQD 290 (547)
T ss_dssp -----CCGGGTH-----------HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHH
T ss_pred -----CCHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHH
Confidence 4444432 4677789999999999999999999999985 557777 888999999
Q ss_pred HHHHhCCeeccc-----cCCCCCCCccccceEEEEEEcCeEEEEEEccCCC-----------------------------
Q 010585 298 LALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG----------------------------- 343 (507)
Q Consensus 298 ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------- 343 (507)
||++|||+++++ ++++++.++|+|+.|+ ++.+++++|+||.++
T Consensus 291 ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~er 367 (547)
T 1kp8_A 291 IATLTGGTVISEEIGMELEKATLEDLGQAKRVV---INKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQER 367 (547)
T ss_dssp HHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHH
T ss_pred HHHHhCCeEecccccCCcccCCHHHCCceeEEE---EccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHH
Confidence 999999999996 8999999999999997 578999999998764
Q ss_pred ------ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 344 ------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 344 ------~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
++|||+|||+|+.+++|+||+++||++++|++++++ +|||||++|++++.+|++++. .++++|+++++|++|
T Consensus 368 lakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~A 445 (547)
T 1kp8_A 368 VAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNVGIKVALRA 445 (547)
T ss_dssp HHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHHHHHHHHHH
Confidence 789999999999999999999999999999999986 999999999999999998876 788999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++++|+.. +.++|||..+|++.||++.|||||+.||+++|+.|+|+|++||++|++|.
T Consensus 446 Le~ip~~la~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~ 521 (547)
T 1kp8_A 446 MEAPLRQIVLNCGEEPSVVANTVKGG----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVT 521 (547)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHS----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhc----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheee
Confidence 99999999999999999999999853 46799999999999999999999999999999999999999999999999
Q ss_pred cCCCCC
Q 010585 498 CAPRRR 503 (507)
Q Consensus 498 ~~~~~~ 503 (507)
..|+++
T Consensus 522 ~~~~~~ 527 (547)
T 1kp8_A 522 DLPKND 527 (547)
T ss_dssp ECCC--
T ss_pred cCCccC
Confidence 987644
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.5e-93 Score=754.50 Aligned_cols=451 Identities=23% Similarity=0.354 Sum_probs=384.8
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccCh----HhHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~~GDGttt~ 77 (507)
+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+||+|+|+++|| +|+|++++|++|++++||||||+
T Consensus 15 ~~i~~~~~la~~vkttLGPkG~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtv 92 (545)
T 1iok_A 15 RMLKGVNILADAVKVTLGPKGRNVVIDKSF--GAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTA 92 (545)
T ss_dssp HHHHHHHHHHHHHGGGCSTTCCEEEECCSS--SSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEECCC--CCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccccCCCcchH
Confidence 689999999999999999999999999997 999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++|+++||+++++++.+|+||..|++||+.|++.+++.|+++++|++.. +.|.+++++++ +++++++++
T Consensus 93 vVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-----e~l~~va~iS~------~~~~~i~~l 161 (545)
T 1iok_A 93 TVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDS-----SEVAQVGTISA------NGESFIGQQ 161 (545)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCST-----TTTTHHHHHTT------TTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH-----HHHHHHHHhhc------CCchhHHHH
Confidence 9999999999999999999999999999999999999999999998643 57888988764 458999999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCc-eeeeeEEEeecCCC--------CCCccccCccEEEeeeccccccccccC
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYG 228 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~I~l~~~~L~~~~~~~~~ 228 (507)
+++|+.+++++.. |+|. +|+++++| ++++|++|++++.+ .|++.++||+|++++++++.
T Consensus 162 i~dAv~~V~~~g~---I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~------- 229 (545)
T 1iok_A 162 IAEAMQRVGNEGV---ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSS------- 229 (545)
T ss_dssp HHHHHHHHCTTSC---CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCC-------
T ss_pred HHHHHHHhccCCe---EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCC-------
Confidence 9999999976543 5554 89999999 99999999999742 36778999999999987542
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHc------CCeEEe-----cCChhhHHH
Q 010585 229 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIE-----HADFDGIER 297 (507)
Q Consensus 229 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~------~I~~i~-----~v~~~~L~~ 297 (507)
++++ ..+++++.+.++++++++++|++.++++|..+ +|++++ ++++++|+|
T Consensus 230 -------~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ 291 (545)
T 1iok_A 230 -------LQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQD 291 (545)
T ss_dssp -------CCC----------------------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHH
T ss_pred -------HHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHH
Confidence 2222 23567788999999999999999999999985 557777 889999999
Q ss_pred HHHHhCCeeccc-----cCCCCCCCccccceEEEEEEcCeEEEEEEccCCC-----------------------------
Q 010585 298 LALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG----------------------------- 343 (507)
Q Consensus 298 ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------- 343 (507)
||++|||+++++ ++++++.++|+|+.|+ ++.++|++|+||.++
T Consensus 292 ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~er 368 (545)
T 1iok_A 292 IAILTGGQVISEDLGMKLENVTIDMLGRAKKVS---INKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQER 368 (545)
T ss_dssp HHHHHTC---------------CTTSEEEEEEE---ECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHH
T ss_pred HHHhcCCeeecccccCCcccCCHHHcCcCcEEE---EecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHH
Confidence 999999999996 9999999999999998 577999999998753
Q ss_pred ------ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010585 344 ------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 417 (507)
Q Consensus 344 ------~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 417 (507)
++|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++. .++++|+++++|++|
T Consensus 369 lakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 369 VAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHHHHHHHHH
T ss_pred HHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHHHHHHHHH
Confidence 789999999999999999999999999999999986 999999999999999998876 788999999999999
Q ss_pred hhHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhh
Q 010585 418 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 497 (507)
Q Consensus 418 L~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 497 (507)
|+.||++|++|||+|+.+++++|+..| ++++|||..+|++.||++.|||||+.||+++|+.|+|+|++||++|++|.
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~ 523 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESS---DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIA 523 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCC---STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhc
Confidence 999999999999999999999998654 46799999999999999999999999999999999999999999999999
Q ss_pred cCCCCC
Q 010585 498 CAPRRR 503 (507)
Q Consensus 498 ~~~~~~ 503 (507)
..|++.
T Consensus 524 ~~~~~~ 529 (545)
T 1iok_A 524 EKPEPK 529 (545)
T ss_dssp ECC---
T ss_pred cCCccC
Confidence 987643
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.5e-92 Score=740.39 Aligned_cols=450 Identities=25% Similarity=0.358 Sum_probs=345.1
Q ss_pred ccHHHHHHHHHHhhhcCCCccccccccccCCCCceEEecChHHHhhhccccChH----hHHHHHHHhhcccccCCCchHH
Q 010585 2 ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPA----AKVLVDISKVQDDEVGDGTTSV 77 (507)
Q Consensus 2 ~n~~~~~~l~~~v~sslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~----~~ll~~~~~~~~~~~GDGttt~ 77 (507)
+|+.|++.|+++|++||||+||+|||+++. |+++|||||+||||+|+++||+ |||++++|++|++++||||||+
T Consensus 14 ~~~~~~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~GDGTTtv 91 (546)
T 3rtk_A 14 GLERGLNALADAVKVTLGPKGRNVVLEKKW--GAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTA 91 (546)
T ss_dssp -------------------------------------------------CCCHHHHHHHHHHHHHHTSCC-------CHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhhCCCcchH
Confidence 699999999999999999999999999997 9999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCChhhhHHHHHHHHHHhhcccccccchhHHHHH
Q 010585 78 VVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQL 157 (507)
Q Consensus 78 vlL~~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~l 157 (507)
++||++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++. ++.|.++++++++ +++++++
T Consensus 92 vVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~-----~e~L~~vA~iS~~-------~~~i~~l 159 (546)
T 3rtk_A 92 TVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVET-----KEQIAATAAISAG-------DQSIGDL 159 (546)
T ss_dssp HHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHHT-------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----hHHHHhHeEEeCC-------chHHHHH
Confidence 999999999999999999999999999999999999999999999873 4789999987653 6789999
Q ss_pred HHHHHHhhccCCCcccceeeecCCCCCCCceeeeeEEEeecCCC--------CCCccccCccEEEeeeccccccccccCe
Q 010585 158 AVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYGA 229 (507)
Q Consensus 158 v~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~--------~~~~~~~n~~I~l~~~~L~~~~~~~~~~ 229 (507)
+++|+.+++.+. .|.|.+.. +...+|++++|++|++++.+ .||+.++||+|+++++.
T Consensus 160 iadAv~~V~~dg---vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~k----------- 224 (546)
T 3rtk_A 160 IAEAMDKVGNEG---VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSK----------- 224 (546)
T ss_dssp HHHHHHHSCTTS---EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSE-----------
T ss_pred HHHHHHHhccCC---ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCc-----------
Confidence 999999997654 36666433 45578999999999998642 57889999999999964
Q ss_pred EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcC------CeEEe-----cCChhhHHHH
Q 010585 230 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIE-----HADFDGIERL 298 (507)
Q Consensus 230 ~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~------I~~i~-----~v~~~~L~~i 298 (507)
+++++++. .+++++.+.++++++++++|++.++++|..++ +++++ +.++++|+||
T Consensus 225 ---Is~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~i 290 (546)
T 3rtk_A 225 ---VSTVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDM 290 (546)
T ss_dssp ---ECCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHH
T ss_pred ---cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHH
Confidence 34444442 35788999999999999999999999998654 45654 3347889999
Q ss_pred HHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEEccCCC------------------------------
Q 010585 299 ALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG------------------------------ 343 (507)
Q Consensus 299 a~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~------------------------------ 343 (507)
|++|||++++ +++++++.++|+|+.|+ ++.+++++|+||.++
T Consensus 291 a~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erl 367 (546)
T 3rtk_A 291 AILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERL 367 (546)
T ss_dssp HHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHH
T ss_pred HHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHH
Confidence 9999999999 58999999999999997 799999999998763
Q ss_pred -----ceeEEEecCCcHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHh
Q 010585 344 -----QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRAL 418 (507)
Q Consensus 344 -----~~~Till~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL 418 (507)
++|||+|||+|+.+++|+||+++||++++|++++++ +|||||++|++++.+|++++ .++++|+++++|++||
T Consensus 368 akl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~i~~~a~AL 444 (546)
T 3rtk_A 368 AKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATGANIVKVAL 444 (546)
T ss_dssp HHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHHHHHHHHHT
T ss_pred HHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHHHHHHHHHH
Confidence 389999999999999999999999999999999875 99999999999999999877 7899999999999999
Q ss_pred hHhHHHHHHhcCCCHHHHHHHHHHHHHcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHhhhc
Q 010585 419 VAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 498 (507)
Q Consensus 419 ~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 498 (507)
+.||++|++|||+|+.+++++|+.. ...+|||..+|++.||++.|||||+.||+++|+.|+|+|+||||+|++|..
T Consensus 445 e~ip~~La~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~ 520 (546)
T 3rtk_A 445 EAPLKQIAFNSGLEPGVVAEKVRNL----PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVAD 520 (546)
T ss_dssp THHHHHHHTTTTCCHHHHHHHHHHS----CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHhh----cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999863 234899999999999999999999999999999999999999999999999
Q ss_pred CCCCCc
Q 010585 499 APRRRE 504 (507)
Q Consensus 499 ~~~~~~ 504 (507)
.|.+++
T Consensus 521 ~~~~~~ 526 (546)
T 3rtk_A 521 KPEKEK 526 (546)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 876543
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.4e-36 Score=275.53 Aligned_cols=172 Identities=22% Similarity=0.354 Sum_probs=148.6
Q ss_pred CCCceeeeeEEEeecCCC-CCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 010585 184 LKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGI 262 (507)
Q Consensus 184 ~~dS~l~~Givl~~~~~~-~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v 262 (507)
++||++++|++|++++.+ +||++++||||++++|+|++++++.. .++.+++++++..+.+.|++++++++++|++.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~-~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQ-TDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC---------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCc-cEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 469999999999999764 59999999999999999999999874 7899999999999999999999999999999999
Q ss_pred eEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccc-cceEEEEEEcCeEEEEEEccC
Q 010585 263 NCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVE 341 (507)
Q Consensus 263 ~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~ 341 (507)
|||+++++|+|.+++||.++||++++|+++++|+|||++|||+++++++++++..+|+ |+.+++..+|+++|++|+||+
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCceeEEEecCCcHH
Q 010585 342 MGQACTIVLRGASHH 356 (507)
Q Consensus 342 ~~~~~Till~G~t~~ 356 (507)
+++.|||+|||++.+
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 999999999999875
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.97 E-value=2.2e-31 Score=236.37 Aligned_cols=153 Identities=27% Similarity=0.434 Sum_probs=144.9
Q ss_pred eeeEEEeecCC-CCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEeC
Q 010585 190 DEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNR 268 (507)
Q Consensus 190 ~~Givl~~~~~-~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~lvl~~ 268 (507)
++|++|++++. .+||++++||||++++|+|++++++.. +++.+++++++..+.+.|++++++++++|++.|+|||+|+
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~-~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHH-HHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccc-eeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 47999999975 469999999999999999999998874 6788999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEEccCCC
Q 010585 269 QLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG 343 (507)
Q Consensus 269 ~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~ 343 (507)
++|+|.+++||.++||++++|+++++|+|||++|||++++++++++++.+|+|+.|++..+|+++|++|+||++.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999864
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=98.41 E-value=3.3e-06 Score=74.86 Aligned_cols=144 Identities=17% Similarity=0.234 Sum_probs=97.5
Q ss_pred eeeeeEEEeecCC-C-------CCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010585 188 FLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIA 259 (507)
Q Consensus 188 ~l~~Givl~~~~~-~-------~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~ 259 (507)
.+++|+-|+++|. + .|...++||.|++++. .|++.+++.++.+ ...+
T Consensus 3 evvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdk--------------KIs~i~~ilP~LE-----------~~~~ 57 (194)
T 3m6c_A 3 EFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQD--------------KISSLPDLLPLLE-----------KVAG 57 (194)
T ss_dssp CCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSS--------------EECCHHHHHHHHH-----------HHHH
T ss_pred EEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcC--------------ccCCHHHHHHHHH-----------HHHH
Confidence 4678999998862 1 3566799999999871 3788888877543 2222
Q ss_pred cCCeEEEeCCCCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCeeccc-----cCCCCCCCccccce
Q 010585 260 HGINCFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKL 323 (507)
Q Consensus 260 ~~v~lvl~~~~i~~~~~~~l~~------~~I~~i~~v~-----~~~L~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~ 323 (507)
.+-.+++....++..++.-|.- .++.+++... +..|++||.+||+++++. +++....++|+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 3334666666788766655422 3567777655 456999999999999984 56777788999998
Q ss_pred EEEEEEcCeEEEEEEccCCCceeEEEecC-CcHHHHHHHHHHHhHHHHHH
Q 010585 324 IEEIMIGEDKLIHFSGVEMGQACTIVLRG-ASHHVLDEAERSLHDALCVL 372 (507)
Q Consensus 324 v~~~~ig~~~~~~~~~~~~~~~~Till~G-~t~~~l~e~~~~i~dal~~~ 372 (507)
+. +. +--|.++.| ++...++++...++..+...
T Consensus 138 v~---vt-------------kd~T~iv~G~g~~~~I~~Rv~qIr~~ie~t 171 (194)
T 3m6c_A 138 VV---VS-------------KDDTVIVDGGGTAEAVANRAKHLRAEIDKS 171 (194)
T ss_dssp EE---EC-------------SSCEEEEEECCCHHHHHHHHHHHHHHHHTC
T ss_pred EE---Ec-------------CCceEEecCCCCHHHHHHHHHHHHHHHHhc
Confidence 86 32 233555544 56666677666666655443
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=98.34 E-value=1e-05 Score=71.83 Aligned_cols=141 Identities=12% Similarity=0.194 Sum_probs=95.8
Q ss_pred eeEEEeecCC--------CCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 010585 191 EGFILDKKIG--------IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGI 262 (507)
Q Consensus 191 ~Givl~~~~~--------~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v 262 (507)
+|+-|+++|. ..|...++||.|++++ -.|++.+++.++. +...+.+-
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitd--------------kKIs~i~~ilP~L-----------E~v~~~~r 67 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVD--------------KKISNIRELLPVL-----------EGVAKASK 67 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEE--------------EEECCHHHHHHHH-----------HHHHTSSC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEc--------------CccCCHHHHHHHH-----------HHHHHhCC
Confidence 5788887752 2356689999999987 2478888887743 33334444
Q ss_pred eEEEeCCCCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCeeccc-----cCCCCCCCccccceEEE
Q 010585 263 NCFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEE 326 (507)
Q Consensus 263 ~lvl~~~~i~~~~~~~l~~------~~I~~i~~v~-----~~~L~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~ 326 (507)
.+++....|+..++.-|.- .++++++... +..|++||.+||+++++. +++.+..++|+|++|.
T Consensus 68 pLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~- 146 (201)
T 3osx_A 68 PLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVV- 146 (201)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEE-
T ss_pred CeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEE-
Confidence 5666667888766665422 3567777665 456999999999999984 5677778899999886
Q ss_pred EEEcCeEEEEEEccCCCceeEEEecC-CcHHHHHHHHHHHhHHHHHH
Q 010585 327 IMIGEDKLIHFSGVEMGQACTIVLRG-ASHHVLDEAERSLHDALCVL 372 (507)
Q Consensus 327 ~~ig~~~~~~~~~~~~~~~~Till~G-~t~~~l~e~~~~i~dal~~~ 372 (507)
+. +--|.++.| .+...++++...++..+...
T Consensus 147 --vt-------------kd~TtIv~G~G~~~~I~~Rv~qIr~qie~t 178 (201)
T 3osx_A 147 --IN-------------KDTTTIIDGVGEEGAIAARVTQIRQQIEES 178 (201)
T ss_dssp --EC-------------SSCEEEEEECCCHHHHHHHHHHHHHHHHTC
T ss_pred --Ec-------------CCceEEecCCCCHHHHHHHHHHHHHHHHhc
Confidence 32 233555544 56667777666666655543
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=98.25 E-value=4.7e-06 Score=70.34 Aligned_cols=118 Identities=19% Similarity=0.260 Sum_probs=81.1
Q ss_pred eEEEeecCC--------CCCCccccCccEEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCe
Q 010585 192 GFILDKKIG--------IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGIN 263 (507)
Q Consensus 192 Givl~~~~~--------~~~~~~~~n~~I~l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~i~~~~v~ 263 (507)
|+.|+++|. ..|...++||.|++++. .|++.+++.++. +++.+.+-.
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdk--------------KIs~i~~llP~L-----------E~v~~~~~p 55 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEK--------------KVSNVRELLPIL-----------EQVAQTGKP 55 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESS--------------EECCHHHHHHHH-----------HHHHTTTCC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecc--------------cccCHHHHHHHH-----------HHHHHHCCC
Confidence 566777652 23567788999999872 378888887743 233344445
Q ss_pred EEEeCCCCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCeeccc-----cCCCCCCCccccceEEEE
Q 010585 264 CFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEI 327 (507)
Q Consensus 264 lvl~~~~i~~~~~~~l~~------~~I~~i~~v~-----~~~L~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~ 327 (507)
+++....++..++.-|.- .++.+++... +..|++||.+||+++++. +++....++|+|+++.
T Consensus 56 LlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~-- 133 (145)
T 1srv_A 56 LLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR-- 133 (145)
T ss_dssp EEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEE--
T ss_pred EEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEE--
Confidence 776677888777765532 3556776553 457999999999999974 5666777899999887
Q ss_pred EEcCeEEEEE
Q 010585 328 MIGEDKLIHF 337 (507)
Q Consensus 328 ~ig~~~~~~~ 337 (507)
+..++.+.+
T Consensus 134 -vtkd~TtIv 142 (145)
T 1srv_A 134 -ITKDETTIV 142 (145)
T ss_dssp -ECSSCEEEE
T ss_pred -EcCCCeEEe
Confidence 554444443
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=51.62 E-value=31 Score=28.46 Aligned_cols=52 Identities=17% Similarity=0.072 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 010585 252 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304 (507)
Q Consensus 252 ~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa 304 (507)
..++.|.+.+|++|++. +|.+.+...|.++||-++.....+--+.|.....+
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G 118 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSG 118 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhC
Confidence 35677778899999997 68999999999999999986654433444444444
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=50.73 E-value=36 Score=27.22 Aligned_cols=53 Identities=19% Similarity=0.136 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCe
Q 010585 252 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 305 (507)
Q Consensus 252 ~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 305 (507)
..++.|.+.+|++|++. ++.+.+...|.++||-++.....+--+.|.....++
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 45677778999999997 689999999999999999865544334444444443
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=47.10 E-value=56 Score=26.15 Aligned_cols=52 Identities=21% Similarity=0.203 Sum_probs=38.7
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCe
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 305 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 305 (507)
.++.|...+|++|++. ++.+-+...|.++||.++......--+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 4566778899999997 589999999999999999865544334444444443
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=45.98 E-value=45 Score=26.57 Aligned_cols=51 Identities=12% Similarity=0.068 Sum_probs=37.8
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCCh-hhHHHHHHHhCC
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADF-DGIERLALVTGG 304 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~-~~L~~ia~~tGa 304 (507)
..+.|.+.+|++|+|. ++.+.+...|.++||-++..... .--+.|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4566777899999997 68999999999999999986554 333344444433
No 36
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=37.60 E-value=49 Score=26.12 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=38.3
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCe
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 305 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 305 (507)
.++.|...+|++|++. ++.+.+...|.++||.++...+..--+.|.....++
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 4566677899999997 588999999999999999865544334455444443
No 37
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=33.23 E-value=74 Score=26.12 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=36.3
Q ss_pred HHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 010585 253 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 304 (507)
Q Consensus 253 ~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa 304 (507)
.++.|.+.+|++|++. ++.+.+...|.+ ||-++.-....--+.+.....+
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G 120 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEG 120 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhC
Confidence 4566777899999997 688999999999 9999987553323334444433
No 38
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=28.82 E-value=1.1e+02 Score=20.60 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=24.3
Q ss_pred HHHHHHHHcCCChHHHHHHHHHH---HHHHHHHHhhcc
Q 010585 86 REAEKLVAAKIHPMTIISGFRMA---AECARDALLQKV 120 (507)
Q Consensus 86 ~~~~~li~~gi~p~~i~~g~~~a---~~~~~~~l~~~~ 120 (507)
.+...|+..|++....+++++.+ .+.+...|.++.
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~ 50 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFA 50 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhc
Confidence 35667889999999999888876 334444444443
No 39
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=26.83 E-value=1.7e+02 Score=23.70 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=45.2
Q ss_pred HHhhCCccccCCCchHHHHHHHHHHHhhcCCChhHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHH
Q 010585 374 QTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLR 441 (507)
Q Consensus 374 ~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~ 441 (507)
.+++|.+++.|...+-..+=-...++ . .+...+-++-|.+||+.+...-+.++-.++.+.+..+.
T Consensus 49 K~~kD~~lidgk~iT~TdvDIiF~Kv-~--k~~r~I~f~qF~~aL~~lA~~k~~g~~~~~~e~l~~ik 113 (125)
T 1pul_A 49 KWLKDAGVLDNKAITGTMTGIAFSKV-T--GPKKKATFDETKKVLAFVAEDRARQSKKPIQDELDAIT 113 (125)
T ss_dssp HHHHHHTSCCSSSSCHHHHHHHHHHH-T--CSSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCccccceeehcc-c--CCcceecHHHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 45678899998888777665555555 2 23455778889999998776655544488877676654
No 40
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=23.40 E-value=1.9e+02 Score=20.11 Aligned_cols=47 Identities=28% Similarity=0.263 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeecc
Q 010585 250 MREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAS 308 (507)
Q Consensus 250 l~~~~~~i~~~~v~lvl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~ 308 (507)
+.++..+.+..|.++-+--.+.+|--.+-|. ++++++++-||..|..
T Consensus 15 lleialkfisqgldlevefdstddkeieefe------------rdmedlakktgvqiqk 61 (83)
T 2ln3_A 15 LLEIALKFISQGLDLEVEFDSTDDKEIEEFE------------RDMEDLAKKTGVQIQK 61 (83)
T ss_dssp HHHHHHHHHHHTCEEEEEECCCCHHHHHHHH------------HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHhcCCceEEEecCCChHHHHHHH------------hHHHHHHHhhchhHHH
Confidence 3445666777788887766667775544443 5699999999987653
No 41
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=23.08 E-value=1.4e+02 Score=20.33 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=27.2
Q ss_pred HHHHHcCCChHHHHHHHHHH----HHHHHHHHhhccccc
Q 010585 89 EKLVAAKIHPMTIISGFRMA----AECARDALLQKVVDN 123 (507)
Q Consensus 89 ~~li~~gi~p~~i~~g~~~a----~~~~~~~l~~~~~~~ 123 (507)
..|++.|+++.....+++.. ++.++++|.+++.|-
T Consensus 14 q~L~eMGFd~erae~Alk~Tg~~Gle~AmewL~k~~~~~ 52 (54)
T 2cos_A 14 QELVNAGCDQEMAGRALKQTGSRSIEAALEYISKMSGPS 52 (54)
T ss_dssp HHHHHHHCCHHHHHHHHHHHTSCCHHHHHHHHHHHSCSC
T ss_pred HHHHHcCCCHHHHHHHHHHhCcccHHHHHHHHHHhcCCC
Confidence 45788899998887777754 667888888888763
Done!