Query 010586
Match_columns 506
No_of_seqs 204 out of 387
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 09:59:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ap5_A GDP-fucose protein O-fu 99.6 4.3E-15 1.5E-19 153.0 15.8 298 102-430 20-383 (408)
2 3zy2_A Putative GDP-fucose pro 99.4 1.3E-12 4.4E-17 134.0 10.0 274 102-427 6-348 (362)
3 2hhc_A NODZ, nodulation fucosy 98.0 4E-05 1.4E-09 76.2 11.8 265 103-420 3-294 (330)
4 2de0_X Alpha-(1,6)-fucosyltran 97.8 0.00078 2.7E-08 72.5 19.3 254 103-426 144-420 (526)
5 3l32_A Phosphoprotein; antipar 32.8 22 0.00075 26.6 2.0 26 246-271 2-27 (45)
6 2ct9_A Calcium-binding protein 32.0 74 0.0025 28.0 5.9 117 327-463 9-142 (208)
7 1wgl_A TOLL-interacting protei 30.2 15 0.0005 28.6 0.7 49 358-411 10-58 (59)
8 1s6c_A KV4 potassium channel-i 28.0 15 0.00051 31.5 0.5 30 436-465 91-123 (183)
9 2l2e_A Calcium-binding protein 25.1 97 0.0033 26.4 5.2 50 410-464 75-129 (190)
10 1l2m_A REP protein; A+B fold, 24.1 80 0.0027 27.8 4.4 29 324-353 17-45 (118)
11 2igp_A Retinoblastoma-associat 22.5 31 0.0011 30.1 1.5 42 330-401 73-114 (120)
No 1
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*
Probab=99.62 E-value=4.3e-15 Score=153.03 Aligned_cols=298 Identities=15% Similarity=0.243 Sum_probs=166.9
Q ss_pred cCCcEEEEEe-cC-cchhhHHHHhHHHHHHHHhCCc----EEecccCCCCccCCC------CCCCccccHHHHHHhcccc
Q 010586 102 KNNGYLMVSC-NG-GLNQMRAAICDMVAIARYLNVT----LIVPELDKTSFWADP------SEFQDIFDVDHFITSLRDE 169 (506)
Q Consensus 102 ~snGyL~V~~-nG-GLNQqR~~IcDaVavARlLNAT----LViP~l~~~s~W~D~------S~F~DIFDvdhFI~sL~~d 169 (506)
...+||+-.. .| |.|+||..+-.|.++|+.||.| ||||-...-.-|+-+ -.|++.||++++ +..
T Consensus 20 ~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~~ 95 (408)
T 4ap5_A 20 SRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NKN 95 (408)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HTT
T ss_pred cccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hhh
Confidence 4688999854 55 8999999999999999999999 999966433335332 379999999875 445
Q ss_pred ceeeccCChhhHhhhhcC---cc------------------------cccC------CCCcCChhh-H------------
Q 010586 170 VRILKELPPRLKKRVEMG---RV------------------------LSMP------PISWSDISY-Y------------ 203 (506)
Q Consensus 170 VrIvk~LP~~~~~~~~~~---~~------------------------~~~~------p~~ws~~~y-Y------------ 203 (506)
|+|+.- +++....... .+ .... ...+.++.| |
T Consensus 96 vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~ 173 (408)
T 4ap5_A 96 IPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLS 173 (408)
T ss_dssp SCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEE
T ss_pred CCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEE
Confidence 566632 2222110000 00 0000 000000000 0
Q ss_pred ----Hhhchhhhhhc---eeEEEeecCcccccCCCCcccchhhceecccccccchHHHHHHHHHHHHHHhcCCeEEEeec
Q 010586 204 ----HNQILPLVQKY---KVVHLNRTDARLANNGQPLEIQKLRCRVNFSALRFTSQIEDLGKRVIKLLRQNGPFLVLHLR 276 (506)
Q Consensus 204 ----~~~ilP~l~k~---~Vi~l~~~d~RLa~d~lP~~iQrLRCrvnf~ALrF~~~I~~Lg~~lV~RLr~~GpfvALHLR 276 (506)
...+-|.+.+. .-+.+..+...|+..--..+...+ -..|+|.+.|.+.|++.++..-. ++|+++|+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~-----~r~l~~s~~l~~~a~~fi~~~L~-~~~~~~h~r 247 (408)
T 4ap5_A 174 VQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDT-----RRSMVFARHLREVGDEFRSRHLN-STDDADRIP 247 (408)
T ss_dssp ECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHH-----HHTCCBCHHHHHHHHHHHHHHHC-CCTTTTTCC
T ss_pred EeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhH-----HHHhhhhHHHHHHHHHHHHHHhC-cccceeecc
Confidence 00011222211 011111111111110000111122 13699999999999998887653 688888888
Q ss_pred chhhhHhhhcCCCCCChHHHHHHHHHHhcCccchhccCChHhhhcCC-CCCCCHHHHHHHHHHcCCCCCceEEEEecccc
Q 010586 277 YEMDMLAFSGCTQGCNKEEVEELTRMRYAYPWWKEKIINSDLKRKDG-LCPLTPEETALILRALDIDPNMQIYIAAGEIY 355 (506)
Q Consensus 277 ~E~DMlAfsgC~~g~~~~E~~eL~~~R~~~~~wk~k~i~~~~~R~~G-~CPLTPeEvgl~L~alGf~~~T~IYlAsgeiy 355 (506)
.+.|+... |.......-. -+.--||+... ...... .+|-.++-+..+.+.+-=.+.+.||||+-+.
T Consensus 248 ~~~dw~~~--~~~~~~~~~~------~y~~~H~Rr~d----~~~~~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~~- 314 (408)
T 4ap5_A 248 FQEDWMKM--KVKLGSALGG------PYLGVHLRRKD----FIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAV- 314 (408)
T ss_dssp CCSSGGGC--CCCTTCBCCE------EEEEEEECCTT----TTTTTCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECCC-
T ss_pred cchhHhhh--hcccccccCC------Ccccccccccc----chhhhhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCCc-
Confidence 88888764 4331110000 00011232111 011112 2343333333333333323456899998652
Q ss_pred CccccchHHHHhCCcccccccCCChhchhhhcccchhhhhhhhhhhccCCcceeCCCCchhhhHhHhhhhcCCcc
Q 010586 356 GGERRMANLAKAYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRFLGYKK 430 (506)
Q Consensus 356 GG~~~l~~L~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDY~Vcl~SDvFV~t~~GNfa~~V~GhR~y~G~~k 430 (506)
+..+..|++.+|.++.-.. ..+++..+ ...+.|.||-+||.+||+||+|..++|+..|.-.|.+.|+..
T Consensus 315 --~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~ 383 (408)
T 4ap5_A 315 --RKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDP 383 (408)
T ss_dssp --HHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCG
T ss_pred --hhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCC
Confidence 4457889999998763222 22344333 234689999999999999999999999999999999999864
No 2
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=99.36 E-value=1.3e-12 Score=134.00 Aligned_cols=274 Identities=18% Similarity=0.314 Sum_probs=161.6
Q ss_pred cCCcEEEE-EecCcchhhHHHHhHHHHHHHHhCCcEEecccCCCCccCCC--CCCCccccHHHHHHhccccceeec----
Q 010586 102 KNNGYLMV-SCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADP--SEFQDIFDVDHFITSLRDEVRILK---- 174 (506)
Q Consensus 102 ~snGyL~V-~~nGGLNQqR~~IcDaVavARlLNATLViP~l~~~s~W~D~--S~F~DIFDvdhFI~sL~~dVrIvk---- 174 (506)
.+||||+- -|-|-+.||-..+.-+.+.|+.||.|||||-+-.-.. ..+ -.|++-|+++. |+..-|||.
T Consensus 6 d~~Gyi~yCPCMGRFGNQadhfLG~LafAk~lnRTLvlPpwi~y~~-~~~~~vpf~~yF~v~~----l~~yhrvi~me~F 80 (362)
T 3zy2_A 6 DPNGYIVFCPCMGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKH-PETKMIPFEFLFQVGT----VAKYTRVVTMQEF 80 (362)
T ss_dssp CTTCEEEECCCSSSHHHHHHHHHHHHHHHHHHTCEEECCCEEECSS-SSCEEECHHHHBCHHH----HTTTSCEECHHHH
T ss_pred CCCccEEeCCCcCccccHHHHHHHHHHHHHhhCceEecCccccccC-Ccccccchhheeecch----hhhhceeeeHHHH
Confidence 47999999 8999999999999999999999999999987742211 111 25888888765 333444442
Q ss_pred --cC-----ChhhH---------------------hhhhcC--cccccCCCCcCChhhH------------------Hhh
Q 010586 175 --EL-----PPRLK---------------------KRVEMG--RVLSMPPISWSDISYY------------------HNQ 206 (506)
Q Consensus 175 --~L-----P~~~~---------------------~~~~~~--~~~~~~p~~ws~~~yY------------------~~~ 206 (506)
+| |++-+ .++.++ .....-.++..+-.+| .+.
T Consensus 81 m~~lap~~WP~~~R~~~C~~~~~~~~~~~~~~~C~~K~GNPFgpfWd~f~v~F~~se~~~~~~~~l~~~~~~~~~~W~~~ 160 (362)
T 3zy2_A 81 TKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCHSKEGNPFGPYWDQIDVSFVGDEYFGDIPGGFDLNQMGSRKKWLEK 160 (362)
T ss_dssp HHHTHHHHSCGGGCEEEESSCBC-------CCBCCTTSSTTHHHHHHHTTCCCCEEEECTTSTTTTCC-------CHHHH
T ss_pred HHHhccccCCcccceEeeccccccccCCCCCCCCCCCCCCCCCcchhccccccccceeccCccccccccchhHHHHHHHh
Confidence 11 11100 000000 0000000001000111 111
Q ss_pred chhhhhhceeEEEeecCcccccCCCC--cccchhhceecccccccchHHHHHHHHHHHHHHhcCCeEEEeecchhhhHhh
Q 010586 207 ILPLVQKYKVVHLNRTDARLANNGQP--LEIQKLRCRVNFSALRFTSQIEDLGKRVIKLLRQNGPFLVLHLRYEMDMLAF 284 (506)
Q Consensus 207 ilP~l~k~~Vi~l~~~d~RLa~d~lP--~~iQrLRCrvnf~ALrF~~~I~~Lg~~lV~RLr~~GpfvALHLR~E~DMlAf 284 (506)
--| .+|-|+.|++.-.- +--.+ -.||| -|+++++|.+.|++.|+.--. +||||+|||.-.|+.-.
T Consensus 161 ~p~--~~~pVlAf~gaPa~--FPv~~e~r~Lqk--------Ym~WS~~i~~~a~~fI~~~L~-rpyVgIHLR~G~DW~~a 227 (362)
T 3zy2_A 161 FPS--EEYPVLAFSSAPAP--FPSKGKVWSIQK--------YLRWSSRITEQAKKFISANLA-KPFVAVHLRNDADWVRV 227 (362)
T ss_dssp SCT--TTCSEEEESSCSSC--SSCCGGGGGGGG--------GCCBCHHHHHHHHHHHHHHCC-SSEEEEEECCCHHHHHH
T ss_pred CCc--ccCceEeecCCCCC--CCcChhhHhHHH--------hccccHHHHHHHHHHHHHhcC-CCeEEEEEecCCcHHHH
Confidence 111 25677777753221 10001 13444 589999999999998887443 39999999999999876
Q ss_pred hcCCCCCChHHHHHHHHHHhcCccchhccCChH---hhhcCC-----CCCCCHHH----HHHHHHHcCCCCCceEEEEec
Q 010586 285 SGCTQGCNKEEVEELTRMRYAYPWWKEKIINSD---LKRKDG-----LCPLTPEE----TALILRALDIDPNMQIYIAAG 352 (506)
Q Consensus 285 sgC~~g~~~~E~~eL~~~R~~~~~wk~k~i~~~---~~R~~G-----~CPLTPeE----vgl~L~alGf~~~T~IYlAsg 352 (506)
|.+--.. + . +..-. +++ .....| .|==+.++ |..+++.++ -..||||+-
T Consensus 228 --C~hlk~~-~------~----~~lfa---SPQC~Gy~~~~~~lt~emClPSle~I~rqIk~~vk~~~---lksVFIATD 288 (362)
T 3zy2_A 228 --CEHIDTT-T------N----RPLFA---SEQCLGEGHHLGTLTKEICSPSKQQILEQIVEKVGSIG---AKSVFVASD 288 (362)
T ss_dssp --HHTCCTT-T------C----CCCTT---THHHHCGGGTTCCCCHHHHSCCHHHHHHHHHHHHHHHT---CSEEEEEES
T ss_pred --Hhhhccc-c------C----ccccc---CCcccCCcccCcccchhccCCCHHHHHHHHHHHHHhcC---CcEEEEecC
Confidence 7651110 0 0 00000 000 000111 23223333 344555555 459999996
Q ss_pred cccCccccchHHHHhCCcccccccCCChhchhhhcccchhhhhhhhhhhccCCcceeCCCCchhhhHhHhhhhcC
Q 010586 353 EIYGGERRMANLAKAYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRFLG 427 (506)
Q Consensus 353 eiyGG~~~l~~L~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDY~Vcl~SDvFV~t~~GNfa~~V~GhR~y~G 427 (506)
.. ..++.|+++|+....+ +.+ +. ...|+||.+||.+||+||+|..++|+..|.-.|-..|
T Consensus 289 a~----~~~~ELk~~L~~~~v~--vv~---~~------pe~a~ID~~I~~~A~~FIGN~~SSFSa~I~rERdi~G 348 (362)
T 3zy2_A 289 KD----HMIDEINEALKPYEIE--AHR---QE------PDDMYTSLAIMGRADLFVGNCVSTFSHIVKRERDHAG 348 (362)
T ss_dssp SC----CCHHHHHHHHGGGTCC--EEC---CS------SCCHHHHHHHHHHSSEEEECTTCHHHHHHHHHHHHSS
T ss_pred CH----HHHHHHHHHhhccCce--EEE---eC------CchhHHHHHHHHhCCEeecCccccccHHHHHHHHhcC
Confidence 53 4578899888642111 111 10 1189999999999999999999999999999999998
No 3
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*
Probab=97.98 E-value=4e-05 Score=76.20 Aligned_cols=265 Identities=11% Similarity=0.167 Sum_probs=129.4
Q ss_pred CCcEEEEEecCcchhhHHHHhHHHHHHHHhCCcEEecccCCCCccCCCCCCCccccHHHHHHhcccc--ceeecc-CChh
Q 010586 103 NNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRDE--VRILKE-LPPR 179 (506)
Q Consensus 103 snGyL~V~~nGGLNQqR~~IcDaVavARlLNATLViP~l~~~s~W~D~S~F~DIFDvdhFI~sL~~d--VrIvk~-LP~~ 179 (506)
+..||.+...|||.+|=-+++.|.++|...|.+|+|--.. ..|-. ..|.+.| ...|. ...+- ..+... .|..
T Consensus 3 ~~r~iv~~~~gGLGNqm~~~a~a~~~A~~t~r~l~vd~~~-~~y~~--~~~~~~f-p~~F~-~v~~~~~~~~~~~~~~~~ 77 (330)
T 2hhc_A 3 KERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRG-SCYVE--QPFSNAF-PAFFE-PVEDIAGVPVICDDRVNQ 77 (330)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHHHTCEEEEECBT-CTTCS--STTSBSH-HHHBC-CCSEETTEEEECSGGGGT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHHHHHHhCCEEEEECCC-cccCC--CCccccC-ccccc-chhhhcccceeccccccc
Confidence 5679999999999999999999999999999998886544 22322 3466666 33342 11100 001110 0000
Q ss_pred hHhhhhcCcccccCCCCcCChh---hH--Hhhchh-------hhh--hc-eeEEEeecCcccccCCCCcccchhhceecc
Q 010586 180 LKKRVEMGRVLSMPPISWSDIS---YY--HNQILP-------LVQ--KY-KVVHLNRTDARLANNGQPLEIQKLRCRVNF 244 (506)
Q Consensus 180 ~~~~~~~~~~~~~~p~~ws~~~---yY--~~~ilP-------~l~--k~-~Vi~l~~~d~RLa~d~lP~~iQrLRCrvnf 244 (506)
.... ....|.-|.... .| .+++.| ++. .+ ....+.+ +.. +...++.-.-...|
T Consensus 78 ----~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~~-----~~w~~~~~~~~~i~ 145 (330)
T 2hhc_A 78 ----LSFP--GPFFPRWWNRPSIDCINRPDEQIFRERDELTELFQAREDSEANTIVC-DAC-----LMWRCSEEAERLIF 145 (330)
T ss_dssp ----CCCC--SSEESGGGGSCGGGGSCCCHHHHHHHHHHHHHHHHSSSCCSCSEEEE-CSC-----CTTSSCHHHHHHHH
T ss_pred ----ccCC--CCcCchhhhccccccccChHHhhhhhhhhhhhhhhhhhccCCCeEEc-ccc-----cccchhhhhHHHHH
Confidence 0000 000000111111 11 122222 111 11 0012221 000 00001110112335
Q ss_pred cccccchHHHHHHHHHHHHHHhcCCeEEEeecchhhhHhhhcCCCCCChHHHHHHHHHHhcCccchhccCChHhhhcCCC
Q 010586 245 SALRFTSQIEDLGKRVIKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNKEEVEELTRMRYAYPWWKEKIINSDLKRKDGL 324 (506)
Q Consensus 245 ~ALrF~~~I~~Lg~~lV~RLr~~GpfvALHLR~E~DMlAfsgC~~g~~~~E~~eL~~~R~~~~~wk~k~i~~~~~R~~G~ 324 (506)
.-|+++++|++..++..+.+-...++|++|.|.=.+. ..|.++- .|.+. .
T Consensus 146 ~yl~p~~~i~~~i~~~~~~~~~~~~~VGVHIRrgD~~---~~~~~~~----------------~~~~~-----------~ 195 (330)
T 2hhc_A 146 RNIKLRSEIRARIDALYEEHFSGHSIIGVHVRHGNGE---DIMEHAP----------------YWADS-----------E 195 (330)
T ss_dssp HHSCBCHHHHHHHHHHHHHHTTTSEEEEEEECC-------------------------------CHHH-----------H
T ss_pred hcCCccHHHHHHHHHHHHHhccCCceEEEEEecCCCC---cccccCc----------------chHHH-----------h
Confidence 7789999999999988866433469999999964321 1122210 01110 0
Q ss_pred CCCCHHHHHHHHHHc-C-CC-CCceEEEEeccccCccccchHHHHhCCccccc-ccCCCh--hchh-hhcc-cchhhhhh
Q 010586 325 CPLTPEETALILRAL-D-ID-PNMQIYIAAGEIYGGERRMANLAKAYPKLVRK-ETLLEP--SDLR-FFQN-HSSQMAAL 396 (506)
Q Consensus 325 CPLTPeEvgl~L~al-G-f~-~~T~IYlAsgeiyGG~~~l~~L~~~FPnl~tK-e~L~s~--eEL~-pf~~-~ss~~AAL 396 (506)
|| -++.-.-++.+ . .+ ++..|||||-+. ..++.|++.||++.+- ..+... ..+- +..+ ...+.+.+
T Consensus 196 ~~--l~~~~~~i~~~~~~~~~~~~~vfvaSDd~----~~~~~lk~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 269 (330)
T 2hhc_A 196 LA--LHQVCMAIRKAKALSYPKPVKVFLCTDSA----QVLDQVSGLFPDVFAVPKRFQADRAGPLHSAEMGIEGGASALI 269 (330)
T ss_dssp HH--HHHHHHHHHHHHTSCCSSCEEEEEEESCH----HHHHHHHHHSTTEECCCC-----------CHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHhccCcCceEEEEEeCCH----HHHHHHHHHcCCcccccceeecccccccccCchhhccchHHHH
Confidence 00 01111111111 1 12 468999999885 4577899999974332 111100 0010 0001 12356889
Q ss_pred hhhhhccCCcce-eCCCCchhhhHh
Q 010586 397 DYLVSLESDIFV-PTYDGNMAKVVE 420 (506)
Q Consensus 397 DY~Vcl~SDvFV-~t~~GNfa~~V~ 420 (506)
|.+....+|.+| .+..++|+...+
T Consensus 270 Dm~LLS~cd~~I~~~~~STFs~~aa 294 (330)
T 2hhc_A 270 DMYLLARCATVIRFPPTSAFTRYAR 294 (330)
T ss_dssp HHHHHTTCSEEEEESTTCGGGHHHH
T ss_pred HHHHHHcCCeeEECCCCCCHHHHHH
Confidence 999999999999 555888988766
No 4
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=97.82 E-value=0.00078 Score=72.52 Aligned_cols=254 Identities=17% Similarity=0.190 Sum_probs=142.8
Q ss_pred CCcEEEEEe--cCcchhhHHHHhHHHHHHHHhCCcEEecccCCCCccCC-CCCCCccccHHHHHHhccccceeeccCChh
Q 010586 103 NNGYLMVSC--NGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWAD-PSEFQDIFDVDHFITSLRDEVRILKELPPR 179 (506)
Q Consensus 103 snGyL~V~~--nGGLNQqR~~IcDaVavARlLNATLViP~l~~~s~W~D-~S~F~DIFDvdhFI~sL~~dVrIvk~LP~~ 179 (506)
+..||.... ..|+..+-..++=|..+|..+|.|||+-.=. |.- ...|+++|.. +...+... |.
T Consensus 144 ~aK~Lv~~~~~~~GfGs~lh~l~~~L~~A~~~~Rtliidd~~----w~Y~~g~w~~yF~P--~s~~C~~~-------~~- 209 (526)
T 2de0_X 144 KAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQN----WRYATGGWETVFRP--VSETCTDR-------SG- 209 (526)
T ss_dssp GSCEEEEECCCSSCHHHHHHHHHHHHHHHHHHTCEEEEECTT----CSSCTTCGGGTBCC--SCSSCCCC-------CC-
T ss_pred CCCEEEEEecCCCchHHHHHHHHHHHHHHHhhCCEEEEECCC----CCcCCCCHHHhhhC--cCccccCC-------Cc-
Confidence 458898876 5799999999999999999999999994432 332 2468888874 21111110 10
Q ss_pred hHhhhhcCcccccCCCCcCChhhHHhhchhhhhhceeEEEeecCc-----ccccCCCCcc----cchhhc-------e-e
Q 010586 180 LKKRVEMGRVLSMPPISWSDISYYHNQILPLVQKYKVVHLNRTDA-----RLANNGQPLE----IQKLRC-------R-V 242 (506)
Q Consensus 180 ~~~~~~~~~~~~~~p~~ws~~~yY~~~ilP~l~k~~Vi~l~~~d~-----RLa~d~lP~~----iQrLRC-------r-v 242 (506)
.....|..... -..+.||.+.-.++ ...+..+|.+ ++++.- . +
T Consensus 210 ------------~~~~~w~~~~~--------~~~~~vV~~~~i~~~~~~~~~~~~~~P~~~~~~L~~l~~dp~~w~~~q~ 269 (526)
T 2de0_X 210 ------------ISTGHWSGEVK--------DKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQF 269 (526)
T ss_dssp ------------SCCCBCCCTTG--------GGGCSEEEECCGGGCSSCCSCCTTCEEGGGHHHHHHHCSCHHHHHHHHH
T ss_pred ------------cccCCCCCccc--------CCCcceEEeeccccccccccccccccchhHHHHHHhccCCcHHHHHHHH
Confidence 01122332210 01334443322111 1111123332 222210 0 1
Q ss_pred cccccccchHHHHHHHHHHHHHHhcCCeEEEeecchhhhHhhhcCCCCCChHHHHHHHHHHhcCccchhccCChHhhhcC
Q 010586 243 NFSALRFTSQIEDLGKRVIKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNKEEVEELTRMRYAYPWWKEKIINSDLKRKD 322 (506)
Q Consensus 243 nf~ALrF~~~I~~Lg~~lV~RLr~~GpfvALHLR~E~DMlAfsgC~~g~~~~E~~eL~~~R~~~~~wk~k~i~~~~~R~~ 322 (506)
.-.-+|+.++|++.-+++.+.+.-.+|.|++|.|-- |-+.. ....-+.+ .|-...
T Consensus 270 ~~yl~rP~~~i~~~I~~~~~~l~~~~piVGVHIRrG-Dk~~~---E~~~~~~~-----~Y~~~v---------------- 324 (526)
T 2de0_X 270 VKYLIRPQPWLEKEIEEATKKLGFKHPVIGVHVRRT-DKVGT---EAAFHPIE-----EYMVHV---------------- 324 (526)
T ss_dssp HHHHTCBCHHHHHHHHHHHHHHTCCSSEEEEEECCC---------CCCSCSHH-----HHHHHH----------------
T ss_pred HHHHcCCCHHHHHHHHHHHHHhCCCCCEEEEEEeCC-CCCcc---ccccCCHH-----HHHHHH----------------
Confidence 111478999999999999888766789999999973 33221 00111110 011000
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCceEEEEeccccCccccchHHHHhCCcc--cccccCCChhch-hhhcccchhhhhhhhh
Q 010586 323 GLCPLTPEETALILRALDIDPNMQIYIAAGEIYGGERRMANLAKAYPKL--VRKETLLEPSDL-RFFQNHSSQMAALDYL 399 (506)
Q Consensus 323 G~CPLTPeEvgl~L~alGf~~~T~IYlAsgeiyGG~~~l~~L~~~FPnl--~tKe~L~s~eEL-~pf~~~ss~~AALDY~ 399 (506)
++.-..|+.......+.||||+-+. ..++.+++.||+. ++-........+ ..+...+-..+.+|.+
T Consensus 325 -------~~~~~~l~~~~~~~~~~ifLATDDp----~v~~e~k~~~p~~~~~~d~~~~~~a~~~~R~s~~~l~~~l~DL~ 393 (526)
T 2de0_X 325 -------EEHFQLLARRMQVDKKRVYLATDDP----SLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIH 393 (526)
T ss_dssp -------HHHHHHHHTTSCCSSCEEEEEESCH----HHHHHHHHHCTTSEEECCCCSSCSSGGGGGTCCTHHHHHHHHHH
T ss_pred -------HHHHHHHHhhcCCCCCeEEEEcCCH----HHHHHHHHhCCCCEEecCcccccccCccccccHHHHHHHHHHHH
Confidence 0111112333467788999999884 5678888889985 322212111111 1111111246899999
Q ss_pred hhccCCcceeCCCCchhhhHhHhhhhc
Q 010586 400 VSLESDIFVPTYDGNMAKVVEGHRRFL 426 (506)
Q Consensus 400 Vcl~SDvFV~t~~GNfa~~V~GhR~y~ 426 (506)
+.+++|+||+|.++||++++...+.-.
T Consensus 394 lLs~cd~~Vgt~sS~~srla~~l~~~~ 420 (526)
T 2de0_X 394 FLSQADFLVCTFSSQVCRVAYEIMQTL 420 (526)
T ss_dssp HHHHSSEEEECTTSHHHHHHHHHHTTS
T ss_pred HHhcCCeeecCCCCHHHHHHHHHhcCc
Confidence 999999999999999999988776544
No 5
>3l32_A Phosphoprotein; antiparallel alpha-helices, viral protein, dimerisation domain; 1.50A {Rabies virus}
Probab=32.82 E-value=22 Score=26.56 Aligned_cols=26 Identities=27% Similarity=0.636 Sum_probs=21.5
Q ss_pred ccccchHHHHHHHHHHHHHHhcCCeE
Q 010586 246 ALRFTSQIEDLGKRVIKLLRQNGPFL 271 (506)
Q Consensus 246 ALrF~~~I~~Lg~~lV~RLr~~Gpfv 271 (506)
++-|+.-+.++|.++|++|++...|.
T Consensus 2 ~vpfQs~LD~vG~qiVrkmKtGe~Ff 27 (45)
T 3l32_A 2 NLLFQSYLDNVGVQIVRQMRSGERFL 27 (45)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTCCHH
T ss_pred CccHHHHHHHHHHHHHHHHHccccHH
Confidence 45688889999999999999865554
No 6
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=31.96 E-value=74 Score=27.99 Aligned_cols=117 Identities=14% Similarity=0.176 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHcCCCCCceEEEEeccccCccccchHHHHhCCccc-ccccCCChhchhhhcccchhhhhhhhhhhccCC
Q 010586 327 LTPEETALILRALDIDPNMQIYIAAGEIYGGERRMANLAKAYPKLV-RKETLLEPSDLRFFQNHSSQMAALDYLVSLESD 405 (506)
Q Consensus 327 LTPeEvgl~L~alGf~~~T~IYlAsgeiyGG~~~l~~L~~~FPnl~-tKe~L~s~eEL~pf~~~ss~~AALDY~Vcl~SD 405 (506)
|+|+|+..+.+..++. +..+..|+..|-.+- ++.-.++.+|+..+....... -.+-++ +
T Consensus 9 l~~~~~~~l~~~~~ls---------------~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~~lg~~~-~~~~l~----~ 68 (208)
T 2ct9_A 9 LRDEELEEIKKETGFS---------------HSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINP-LGDRII----N 68 (208)
T ss_dssp CCHHHHHHHHHHHCCC---------------HHHHHHHHHHHHHHCTTCSSEECTGGGGGCHHHHTST-THHHHH----H
T ss_pred CCHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHcCCCC-cHHHHH----H
Confidence 5677777777766665 223455666665442 345556666665432110000 001011 1
Q ss_pred cceeCCCC--chhhhHhHhhhhcCCcc-----------eeeccHHHHHHHHHhhc---CCCCChHHHHHHHHHH
Q 010586 406 IFVPTYDG--NMAKVVEGHRRFLGYKK-----------TILLERKLLVDLIDQYS---NGSLTWDEFSAAVKES 463 (506)
Q Consensus 406 vFV~t~~G--Nfa~~V~GhR~y~G~~k-----------TI~Pdrk~l~~L~~~~~---~~~~~w~~f~~~v~~~ 463 (506)
.|-...+| +|.-.+..-..+..... +.......+..+|..++ +|.|+.+||...++.+
T Consensus 69 ~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 142 (208)
T 2ct9_A 69 AFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM 142 (208)
T ss_dssp TTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHH
Confidence 12223455 35555544433322111 01123455555565554 7789999999988765
No 7
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=30.17 E-value=15 Score=28.59 Aligned_cols=49 Identities=16% Similarity=0.323 Sum_probs=34.4
Q ss_pred cccchHHHHhCCcccccccCCChhchhhhcccchhhhhhhhhhhccCCcceeCC
Q 010586 358 ERRMANLAKAYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVSLESDIFVPTY 411 (506)
Q Consensus 358 ~~~l~~L~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDY~Vcl~SDvFV~t~ 411 (506)
+..++.|++|||++- ++.+-. =|. .+..+..+|||-+..+..+-|=|++
T Consensus 10 ee~l~~L~emFP~ld-~~~I~~--vL~--a~~gdvd~aI~~LL~m~~~~~~~~~ 58 (59)
T 1wgl_A 10 EEDLKAIQDMFPNMD-QEVIRS--VLE--AQRGNKDAAINSLLQMGEEPSGPSS 58 (59)
T ss_dssp HHHHHHHHHHCSSSC-HHHHHH--HHT--TTTTCHHHHHHHHHHSSCCCCSCCC
T ss_pred HHHHHHHHHHCCCCC-HHHHHH--HHH--HcCCCHHHHHHHHHcCcCCCCCCCC
Confidence 567899999999874 333211 121 3345679999999999988887765
No 8
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=28.00 E-value=15 Score=31.46 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=21.0
Q ss_pred HHHHHHHHHhh---cCCCCChHHHHHHHHHHHh
Q 010586 436 RKLLVDLIDQY---SNGSLTWDEFSAAVKESHA 465 (506)
Q Consensus 436 rk~l~~L~~~~---~~~~~~w~~f~~~v~~~h~ 465 (506)
...+..+|..+ .+|.|+.+||...+..++.
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~ 123 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYD 123 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHH
Confidence 34455555444 4789999999999988753
No 9
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=25.08 E-value=97 Score=26.39 Aligned_cols=50 Identities=16% Similarity=0.153 Sum_probs=30.0
Q ss_pred CCCC--chhhhHhHhhhhcCCcceeeccHHHHHHHHHhh---cCCCCChHHHHHHHHHHH
Q 010586 410 TYDG--NMAKVVEGHRRFLGYKKTILLERKLLVDLIDQY---SNGSLTWDEFSAAVKESH 464 (506)
Q Consensus 410 t~~G--Nfa~~V~GhR~y~G~~kTI~Pdrk~l~~L~~~~---~~~~~~w~~f~~~v~~~h 464 (506)
..+| ++.-++..-+... ..+....+..+|..+ .+|.|+++||...+..++
T Consensus 75 d~~G~i~~~ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~ 129 (190)
T 2l2e_A 75 DKNGYIDFKEFICALSVTS-----RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIY 129 (190)
T ss_dssp SSTTCEEHHHHHHHHTTSS-----CSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHH
T ss_pred CCCCeEeHHHHHHHHHHHc-----CCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHH
Confidence 3455 3555555444322 123445555555444 478999999999988753
No 10
>1l2m_A REP protein; A+B fold, RBD-like fold, viral protein; NMR {Tomato yellow leaf curl sardiniavirus} SCOP: d.89.1.4 PDB: 1l5i_A
Probab=24.05 E-value=80 Score=27.76 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=22.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEEEecc
Q 010586 324 LCPLTPEETALILRALDIDPNMQIYIAAGE 353 (506)
Q Consensus 324 ~CPLTPeEvgl~L~alGf~~~T~IYlAsge 353 (506)
.||||+||+...|+.|--+. ...||..+.
T Consensus 17 ~c~l~Ke~~l~~l~~l~~p~-~~~yi~i~r 45 (118)
T 1l2m_A 17 KCDLTKENALSQITNLQTPT-NKLFIKICR 45 (118)
T ss_dssp TCCCCHHHHHHHHHHCCCSS-CEEEEEEEE
T ss_pred CCCCCHHHHHHHHHhhcCCc-ceeeeeehh
Confidence 59999999999999987554 356666554
No 11
>2igp_A Retinoblastoma-associated protein HEC; calponin homology (CH) domain, alpha helices, cell cycle; 1.80A {Homo sapiens}
Probab=22.51 E-value=31 Score=30.10 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCCCCCceEEEEeccccCccccchHHHHhCCcccccccCCChhchhhhcccchhhhhhhhhhh
Q 010586 330 EETALILRALDIDPNMQIYIAAGEIYGGERRMANLAKAYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVS 401 (506)
Q Consensus 330 eEvgl~L~alGf~~~T~IYlAsgeiyGG~~~l~~L~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDY~Vc 401 (506)
|||-.+|++|||| |+ .||..|.++.- | .+....++||+++|=
T Consensus 73 eev~~~lK~L~YP-------------------------~~--isKS~L~a~g~--p-HsWp~~L~~L~WLve 114 (120)
T 2igp_A 73 EEVPRIFKDLGYP-------------------------FA--LSKSSMYTVGA--P-HTWPHIVAALVWLID 114 (120)
T ss_dssp HHHHHHHHHTTCC-------------------------SC--CCHHHHHTTTS--T-TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-------------------------ce--eCHHHhcCCCC--C-ccHHHHHHHHHHHHH
Confidence 6789999999999 22 56777665421 1 123356899988873
Done!