Query 010586
Match_columns 506
No_of_seqs 204 out of 387
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 10:00:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010586.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010586hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wgla_ a.5.2.4 (A:) Toll-inte 41.1 3 0.00022 30.9 0.3 49 358-411 10-58 (59)
2 d2ihoa2 d.3.1.18 (A:156-293) A 39.7 1.8 0.00013 36.7 -1.3 35 136-170 32-71 (138)
3 d1l5ia_ d.89.1.4 (A:) DNA-bind 37.7 14 0.001 30.6 4.1 29 324-353 17-45 (118)
4 d1oqya2 a.5.2.1 (A:317-360) DN 22.4 5.2 0.00038 28.1 -1.2 26 328-353 1-30 (44)
5 d2g7ja1 d.198.5.1 (A:1-112) Pu 18.3 22 0.0016 28.7 1.7 18 327-344 3-20 (112)
6 d1vjna_ d.157.1.4 (A:) Hypothe 17.2 1E+02 0.0074 26.1 6.1 43 120-168 141-184 (209)
7 d1a9xb1 c.8.3.1 (B:1502-1652) 16.6 43 0.0031 28.4 3.2 20 206-225 96-115 (151)
8 d1bjfa_ a.39.1.5 (A:) Neurocal 16.3 47 0.0034 26.7 3.4 56 409-466 70-127 (181)
9 d2gh1a1 c.66.1.49 (A:13-293) M 15.9 32 0.0023 30.5 2.4 92 241-343 98-189 (281)
10 d1okga1 c.46.1.2 (A:7-162) 3-m 15.2 62 0.0045 27.0 4.0 23 328-350 73-95 (156)
No 1
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.06 E-value=3 Score=30.93 Aligned_cols=49 Identities=18% Similarity=0.336 Sum_probs=36.3
Q ss_pred cccchHHHHhCCcccccccCCChhchhhhcccchhhhhhhhhhhccCCcceeCC
Q 010586 358 ERRMANLAKAYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVSLESDIFVPTY 411 (506)
Q Consensus 358 ~~~l~~L~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDY~Vcl~SDvFV~t~ 411 (506)
+..+..|++|||++. ++.+- .=|. .+..+..+|+|=+.-+.-+.|-|++
T Consensus 10 Ee~i~~LkeMFP~~D-~~vI~--~VL~--a~~G~vd~aid~LL~Msd~~~gp~s 58 (59)
T d1wgla_ 10 EEDLKAIQDMFPNMD-QEVIR--SVLE--AQRGNKDAAINSLLQMGEEPSGPSS 58 (59)
T ss_dssp HHHHHHHHHHCSSSC-HHHHH--HHHT--TTTTCHHHHHHHHHHSSCCCCSCCC
T ss_pred HHHHHHHHHHCCCCC-HHHHH--HHHH--HcCCCHHHHHHHHHhcCCCCcCCCC
Confidence 567999999999985 33332 1232 4566789999999999888888765
No 2
>d2ihoa2 d.3.1.18 (A:156-293) Agglutinin MOA {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]}
Probab=39.65 E-value=1.8 Score=36.67 Aligned_cols=35 Identities=29% Similarity=0.619 Sum_probs=29.8
Q ss_pred EEecccCCCCccCCC-----CCCCccccHHHHHHhccccc
Q 010586 136 LIVPELDKTSFWADP-----SEFQDIFDVDHFITSLRDEV 170 (506)
Q Consensus 136 LViP~l~~~s~W~D~-----S~F~DIFDvdhFI~sL~~dV 170 (506)
||+|...-+++|+++ ..=+.|||-|.|--..+.-|
T Consensus 32 LVLp~~~~s~IWk~SGL~~t~~R~~I~D~DdFA~~~KaAv 71 (138)
T d2ihoa2 32 LVLPNATFTQIWKDSGLPGSKWREQIYDCDDFAIAMKAAV 71 (138)
T ss_dssp ECCCHHHHHHHHHTTTCTTCCCBTTTBCHHHHHHHHHHHH
T ss_pred EEechHHHHHHHhccCCCCCcccccccccHHHHHHHHHHH
Confidence 899999999999996 34578999999988887655
No 3
>d1l5ia_ d.89.1.4 (A:) DNA-binding domain of REP protein {Geminivirus (Tomato yellow leaf curl virus - sardinia) [TaxId: 123735]}
Probab=37.73 E-value=14 Score=30.57 Aligned_cols=29 Identities=24% Similarity=0.369 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEEEecc
Q 010586 324 LCPLTPEETALILRALDIDPNMQIYIAAGE 353 (506)
Q Consensus 324 ~CPLTPeEvgl~L~alGf~~~T~IYlAsge 353 (506)
+|||||||+...|+.|--+.+. .||..++
T Consensus 17 ~C~l~ke~~l~~l~~l~~p~~~-~~i~v~r 45 (118)
T d1l5ia_ 17 KCDLTKENALSQITNLQTPTNK-LFIKICR 45 (118)
T ss_dssp TCCCCHHHHHHHHHHCCCSSCE-EEEEEEE
T ss_pred CCCCCHHHHHHHHHHhcCCcce-eEEEEcc
Confidence 5999999999999998765444 5776554
No 4
>d1oqya2 a.5.2.1 (A:317-360) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.39 E-value=5.2 Score=28.11 Aligned_cols=26 Identities=31% Similarity=0.473 Sum_probs=17.8
Q ss_pred CHHHHH--HHHHHcCCCCCce--EEEEecc
Q 010586 328 TPEETA--LILRALDIDPNMQ--IYIAAGE 353 (506)
Q Consensus 328 TPeEvg--l~L~alGf~~~T~--IYlAsge 353 (506)
||+|.. .=|.+|||+++.. +|+|-.+
T Consensus 1 T~ee~~aIeRL~~LGF~r~~viqay~ACdK 30 (44)
T d1oqya2 1 TPQEKEAIERLKALGFPESLVIQAYFACEK 30 (44)
T ss_dssp CTTTHHHHHHHHHHTCCSHHHHHHTSSSSS
T ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHhCc
Confidence 455554 3478999998874 5777655
No 5
>d2g7ja1 d.198.5.1 (A:1-112) Putative cytoplasmic protein YgaC {Salmonella typhimurium [TaxId: 90371]}
Probab=18.33 E-value=22 Score=28.72 Aligned_cols=18 Identities=28% Similarity=0.469 Sum_probs=16.1
Q ss_pred CCHHHHHHHHHHcCCCCC
Q 010586 327 LTPEETALILRALDIDPN 344 (506)
Q Consensus 327 LTPeEvgl~L~alGf~~~ 344 (506)
|-|.||+.+|+..||..+
T Consensus 3 LRPDEVArVLe~aGF~~d 20 (112)
T d2g7ja1 3 LRPDEVARVLEKAGFTVD 20 (112)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred cChHHHHHHHHHcCceEE
Confidence 679999999999999754
No 6
>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]}
Probab=17.19 E-value=1e+02 Score=26.13 Aligned_cols=43 Identities=21% Similarity=0.403 Sum_probs=30.0
Q ss_pred HHHhHHHHHHHHhCCcEEecccCCCCccCC-CCCCCccccHHHHHHhccc
Q 010586 120 AAICDMVAIARYLNVTLIVPELDKTSFWAD-PSEFQDIFDVDHFITSLRD 168 (506)
Q Consensus 120 ~~IcDaVavARlLNATLViP~l~~~s~W~D-~S~F~DIFDvdhFI~sL~~ 168 (506)
..--+|+.+|+.|++-.|||-= |+. ...| ++=.+|.|++.++.
T Consensus 141 m~~~ea~~~~~~l~pk~viP~H-----~~t~~~~~-~~~~~~~f~~~~~~ 184 (209)
T d1vjna_ 141 IGPKEAKEVADLLNAKVIIPMH-----YKTKYLKF-NLLPVDDFLKLFDS 184 (209)
T ss_dssp CCHHHHHHHHHHTTCSEEEEES-----CCCSSCCT-TCCCTHHHHTTSSC
T ss_pred cCHHHHHHHHHHhCCCEEEEec-----cCCccccc-CcCCHHHHHHHhhh
Confidence 3467899999999999999952 322 2222 34557888887663
No 7
>d1a9xb1 c.8.3.1 (B:1502-1652) Carbamoyl phosphate synthetase, small subunit N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=16.56 E-value=43 Score=28.40 Aligned_cols=20 Identities=15% Similarity=0.399 Sum_probs=16.9
Q ss_pred hchhhhhhceeEEEeecCcc
Q 010586 206 QILPLVQKYKVVHLNRTDAR 225 (506)
Q Consensus 206 ~ilP~l~k~~Vi~l~~~d~R 225 (506)
.+...|++++|..|.+.|-|
T Consensus 96 sL~~~L~~~~IpgI~gIDTR 115 (151)
T d1a9xb1 96 DLSSYLKRHNIVAIADIDTR 115 (151)
T ss_dssp CHHHHHHHTTCEEEESSCHH
T ss_pred CHHHHHHHcCCccccccCHH
Confidence 44568999999999998887
No 8
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}
Probab=16.34 E-value=47 Score=26.74 Aligned_cols=56 Identities=14% Similarity=0.068 Sum_probs=32.4
Q ss_pred eCCCC--chhhhHhHhhhhcCCcceeeccHHHHHHHHHhhcCCCCChHHHHHHHHHHHhh
Q 010586 409 PTYDG--NMAKVVEGHRRFLGYKKTILLERKLLVDLIDQYSNGSLTWDEFSAAVKESHAD 466 (506)
Q Consensus 409 ~t~~G--Nfa~~V~GhR~y~G~~kTI~Pdrk~l~~L~~~~~~~~~~w~~f~~~v~~~h~~ 466 (506)
...+| +|.-.+.+-..+.-. +-.=.-+.+..++|.-.+|.|+.+||...++.++..
T Consensus 70 ~~~~g~i~~~eFl~~~~~~~~~--~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~ 127 (181)
T d1bjfa_ 70 ANGDGTIDFREFIIALSVTSRG--KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKM 127 (181)
T ss_dssp SSCSSEEEHHHHHHHHHHHTSS--CHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTT
T ss_pred CCCCCcEeHHHHHHHHHHHhhh--chHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhh
Confidence 34445 355555555444310 000112345556665568899999999999987653
No 9
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}
Probab=15.86 E-value=32 Score=30.55 Aligned_cols=92 Identities=12% Similarity=0.203 Sum_probs=57.3
Q ss_pred eecccccccchHHHHHHHHHHHHHHhcCCeEEEeecchhhhHhhhcCCCCCChHHHHHHHHHHhcCccchhccCChHhhh
Q 010586 241 RVNFSALRFTSQIEDLGKRVIKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNKEEVEELTRMRYAYPWWKEKIINSDLKR 320 (506)
Q Consensus 241 rvnf~ALrF~~~I~~Lg~~lV~RLr~~GpfvALHLR~E~DMlAfsgC~~g~~~~E~~eL~~~R~~~~~wk~k~i~~~~~R 320 (506)
-+..++|...++.+.+-+++.+.|+..|.++....-...++..+. ..+....+...+.. |+.. + ....+
T Consensus 98 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~-~-~~~~~ 166 (281)
T d2gh1a1 98 AICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYL--LDGEKQSEFIQLGV-------LQKL-F-ESDTQ 166 (281)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHTSEE--ETTSCHHHHCCHHH-------HHHH-H-HHHHH
T ss_pred EEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEECCccccchhhc--cCchhhhhhhhHHH-------HHHH-H-HHHHH
Confidence 355667777788888888888889989988887665555555542 22222222211111 1110 1 12234
Q ss_pred cCCCCCCCHHHHHHHHHHcCCCC
Q 010586 321 KDGLCPLTPEETALILRALDIDP 343 (506)
Q Consensus 321 ~~G~CPLTPeEvgl~L~alGf~~ 343 (506)
..|.-|....++..+|+.+||.+
T Consensus 167 ~~~~~~~i~~~l~~~l~eaGf~~ 189 (281)
T d2gh1a1 167 RNGKDGNIGMKIPIYLSELGVKN 189 (281)
T ss_dssp TTCCCTTGGGTHHHHHHHTTCEE
T ss_pred HcCCCCCHHHHHHHHHHHcCCeE
Confidence 56777777788899999999984
No 10
>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=15.25 E-value=62 Score=27.02 Aligned_cols=23 Identities=9% Similarity=-0.113 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHcCCCCCceEEEE
Q 010586 328 TPEETALILRALDIDPNMQIYIA 350 (506)
Q Consensus 328 TPeEvgl~L~alGf~~~T~IYlA 350 (506)
+|++....|+.+|++++|.|-|=
T Consensus 73 ~~~~~~~~l~~lGI~~~~~VVvY 95 (156)
T d1okga1 73 PCAEFIDWCMANGMAGELPVLCY 95 (156)
T ss_dssp CHHHHHHHHHHTTCSSSSCEEEE
T ss_pred CHHHHHHHHHhccccCCceEEEE
Confidence 78999999999999999987663
Done!