Query 010587
Match_columns 506
No_of_seqs 179 out of 2322
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 10:01:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s3e_A Amine oxidase [flavin-c 100.0 1.8E-45 6.2E-50 379.1 36.0 422 26-479 2-456 (520)
2 2yg5_A Putrescine oxidase; oxi 100.0 5.3E-44 1.8E-48 362.3 32.6 419 27-477 4-451 (453)
3 2z3y_A Lysine-specific histone 100.0 7.5E-42 2.6E-46 359.5 44.3 448 25-478 104-659 (662)
4 2vvm_A Monoamine oxidase N; FA 100.0 6.5E-43 2.2E-47 358.2 33.7 409 28-478 39-486 (495)
5 2xag_A Lysine-specific histone 100.0 1.5E-41 5.1E-46 360.7 44.2 448 26-479 276-831 (852)
6 4gut_A Lysine-specific histone 100.0 7.1E-42 2.4E-46 361.3 41.4 421 27-475 335-775 (776)
7 1rsg_A FMS1 protein; FAD bindi 100.0 2.2E-42 7.4E-47 355.4 36.0 422 27-480 7-510 (516)
8 1b37_A Protein (polyamine oxid 100.0 1E-40 3.5E-45 339.4 43.4 424 27-479 3-460 (472)
9 3k7m_X 6-hydroxy-L-nicotine ox 100.0 5.5E-40 1.9E-44 330.7 33.7 400 28-475 1-424 (431)
10 2iid_A L-amino-acid oxidase; f 100.0 8.5E-40 2.9E-44 335.3 32.5 432 26-479 31-486 (498)
11 3i6d_A Protoporphyrinogen oxid 100.0 1.5E-39 5E-44 331.5 25.0 408 27-477 4-468 (470)
12 2jae_A L-amino acid oxidase; o 100.0 9.2E-38 3.1E-42 319.5 36.2 423 26-480 9-488 (489)
13 2ivd_A PPO, PPOX, protoporphyr 100.0 6.6E-39 2.3E-43 327.2 26.9 402 26-479 14-475 (478)
14 3lov_A Protoporphyrinogen oxid 100.0 3.7E-38 1.3E-42 321.3 22.8 410 28-480 4-468 (475)
15 1sez_A Protoporphyrinogen oxid 100.0 3.4E-37 1.2E-41 316.5 27.8 416 26-479 11-495 (504)
16 3ka7_A Oxidoreductase; structu 100.0 5.9E-36 2E-40 300.7 28.1 403 29-474 1-424 (425)
17 3nks_A Protoporphyrinogen oxid 100.0 8.1E-37 2.8E-41 311.7 19.8 405 28-476 2-473 (477)
18 4dgk_A Phytoene dehydrogenase; 100.0 5.5E-36 1.9E-40 307.4 24.5 429 28-480 1-494 (501)
19 3ayj_A Pro-enzyme of L-phenyla 100.0 1.2E-35 4E-40 306.8 23.0 244 235-480 338-682 (721)
20 4gde_A UDP-galactopyranose mut 100.0 2.2E-35 7.4E-40 304.1 23.9 404 27-475 9-477 (513)
21 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 3E-34 1E-38 279.5 27.8 228 237-476 105-341 (342)
22 3nrn_A Uncharacterized protein 100.0 9.1E-34 3.1E-38 284.2 26.5 386 29-473 1-403 (421)
23 4dsg_A UDP-galactopyranose mut 100.0 1.6E-32 5.6E-37 278.4 26.2 404 27-474 8-452 (484)
24 2b9w_A Putative aminooxidase; 100.0 3.2E-30 1.1E-34 258.8 23.4 391 27-474 5-423 (424)
25 1yvv_A Amine oxidase, flavin-c 100.0 1.8E-27 6.1E-32 231.2 31.0 321 28-477 2-327 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 1.5E-26 5E-31 229.1 14.3 245 25-335 4-275 (399)
27 1i8t_A UDP-galactopyranose mut 99.9 3E-25 1E-29 217.0 18.2 244 28-336 1-262 (367)
28 2bi7_A UDP-galactopyranose mut 99.9 2.5E-24 8.7E-29 211.6 19.5 242 28-331 3-260 (384)
29 3hdq_A UDP-galactopyranose mut 99.9 5.5E-23 1.9E-27 200.6 22.3 245 25-338 26-292 (397)
30 2bcg_G Secretory pathway GDP d 99.9 3.8E-21 1.3E-25 193.6 18.0 243 25-294 8-299 (453)
31 3kkj_A Amine oxidase, flavin-c 99.8 2.2E-18 7.6E-23 162.9 27.8 59 27-85 1-59 (336)
32 3p1w_A Rabgdi protein; GDI RAB 99.8 3E-19 1E-23 177.5 14.4 242 25-294 17-313 (475)
33 1d5t_A Guanine nucleotide diss 99.8 7.1E-19 2.4E-23 175.8 16.6 242 25-295 3-290 (433)
34 2e1m_A L-glutamate oxidase; L- 99.8 1.9E-18 6.6E-23 167.0 16.3 79 26-106 42-131 (376)
35 2e1m_C L-glutamate oxidase; L- 99.6 6.6E-16 2.3E-20 133.8 9.4 129 349-479 19-154 (181)
36 3oz2_A Digeranylgeranylglycero 99.5 1E-12 3.5E-17 129.9 19.4 38 28-65 4-41 (397)
37 3ps9_A TRNA 5-methylaminomethy 99.5 4.7E-12 1.6E-16 133.8 23.4 51 245-295 422-473 (676)
38 3rp8_A Flavoprotein monooxygen 99.5 1E-12 3.4E-17 130.5 16.8 50 246-296 133-182 (407)
39 1vg0_A RAB proteins geranylger 99.5 7.8E-13 2.7E-17 135.2 15.9 57 234-290 368-432 (650)
40 3nyc_A D-arginine dehydrogenas 99.5 1.6E-12 5.5E-17 127.8 17.7 49 246-295 160-209 (381)
41 3pvc_A TRNA 5-methylaminomethy 99.4 1.3E-11 4.6E-16 130.4 24.0 51 245-295 417-469 (689)
42 3ihg_A RDME; flavoenzyme, anth 99.4 2.5E-12 8.7E-17 132.2 17.1 51 246-296 126-184 (535)
43 3i3l_A Alkylhalidase CMLS; fla 99.4 1.9E-12 6.5E-17 133.5 15.0 37 28-64 23-59 (591)
44 3dme_A Conserved exported prot 99.4 1.6E-12 5.5E-17 127.2 13.8 41 27-67 3-43 (369)
45 1y56_B Sarcosine oxidase; dehy 99.4 1.4E-11 4.7E-16 121.2 20.4 49 246-295 155-205 (382)
46 2oln_A NIKD protein; flavoprot 99.4 1.6E-10 5.4E-15 114.2 27.3 50 244-294 157-207 (397)
47 1ryi_A Glycine oxidase; flavop 99.4 2.8E-12 9.6E-17 126.2 14.5 49 246-295 170-219 (382)
48 3fmw_A Oxygenase; mithramycin, 99.4 1.2E-11 4.1E-16 127.3 19.0 44 253-296 162-208 (570)
49 2qa1_A PGAE, polyketide oxygen 99.4 4.1E-11 1.4E-15 121.7 22.2 45 253-297 120-167 (500)
50 3nix_A Flavoprotein/dehydrogen 99.4 7.9E-12 2.7E-16 124.7 16.7 43 253-295 120-166 (421)
51 3cgv_A Geranylgeranyl reductas 99.4 3.3E-11 1.1E-15 119.1 20.7 38 28-65 4-41 (397)
52 3v76_A Flavoprotein; structura 99.4 1.8E-12 6.3E-17 128.1 10.8 42 26-67 25-66 (417)
53 3dje_A Fructosyl amine: oxygen 99.3 4.5E-12 1.5E-16 127.1 12.9 52 245-296 166-222 (438)
54 2qa2_A CABE, polyketide oxygen 99.3 5.3E-11 1.8E-15 120.8 20.6 45 253-297 121-168 (499)
55 3e1t_A Halogenase; flavoprotei 99.3 1.6E-11 5.6E-16 125.3 15.4 36 27-62 6-41 (512)
56 4hb9_A Similarities with proba 99.3 4.2E-11 1.4E-15 118.9 17.6 52 246-297 114-168 (412)
57 3atr_A Conserved archaeal prot 99.3 7.7E-11 2.6E-15 118.5 16.9 37 27-63 5-41 (453)
58 1k0i_A P-hydroxybenzoate hydro 99.2 5.7E-11 1.9E-15 117.3 11.8 52 246-297 109-165 (394)
59 1qo8_A Flavocytochrome C3 fuma 99.2 9.5E-11 3.3E-15 121.1 13.6 42 25-66 118-159 (566)
60 2uzz_A N-methyl-L-tryptophan o 99.2 8.9E-11 3E-15 114.9 12.5 50 245-295 154-204 (372)
61 2vou_A 2,6-dihydroxypyridine h 99.2 1.4E-10 4.7E-15 114.6 13.8 45 252-296 110-154 (397)
62 1y0p_A Fumarate reductase flav 99.2 1.4E-10 4.8E-15 120.0 14.3 42 26-67 124-165 (571)
63 4at0_A 3-ketosteroid-delta4-5a 99.2 1.6E-10 5.5E-15 117.8 14.4 41 27-67 40-80 (510)
64 2gmh_A Electron transfer flavo 99.2 5.1E-10 1.7E-14 115.7 18.2 41 26-66 33-79 (584)
65 4ap3_A Steroid monooxygenase; 99.2 8.7E-11 3E-15 120.3 12.2 53 27-79 20-72 (549)
66 2gqf_A Hypothetical protein HI 99.2 6E-11 2E-15 116.8 10.4 40 28-67 4-43 (401)
67 2xdo_A TETX2 protein; tetracyc 99.2 2.2E-10 7.4E-15 113.2 14.4 45 253-297 140-184 (398)
68 2gf3_A MSOX, monomeric sarcosi 99.2 2.3E-10 7.8E-15 112.7 14.0 49 246-295 156-205 (389)
69 1w4x_A Phenylacetone monooxyge 99.2 1.4E-10 4.9E-15 119.1 12.5 43 27-69 15-57 (542)
70 2gag_B Heterotetrameric sarcos 99.2 3.3E-11 1.1E-15 119.5 7.4 49 246-295 180-230 (405)
71 2i0z_A NAD(FAD)-utilizing dehy 99.2 7.6E-11 2.6E-15 118.2 10.0 41 26-66 24-64 (447)
72 3gwf_A Cyclohexanone monooxyge 99.2 1.3E-10 4.3E-15 118.9 11.7 53 27-79 7-60 (540)
73 2r0c_A REBC; flavin adenine di 99.1 1.7E-09 5.7E-14 111.3 19.5 37 28-64 26-62 (549)
74 3da1_A Glycerol-3-phosphate de 99.1 2E-10 6.9E-15 118.1 12.4 41 27-67 17-57 (561)
75 2zbw_A Thioredoxin reductase; 99.1 1.9E-10 6.6E-15 110.8 11.1 41 27-67 4-44 (335)
76 3uox_A Otemo; baeyer-villiger 99.1 1E-10 3.6E-15 119.7 9.2 48 27-74 8-55 (545)
77 3nlc_A Uncharacterized protein 99.1 1.8E-10 6.1E-15 117.1 10.3 42 26-67 105-146 (549)
78 2x3n_A Probable FAD-dependent 99.1 2.1E-10 7.1E-15 113.4 10.2 51 246-296 113-167 (399)
79 3ab1_A Ferredoxin--NADP reduct 99.1 3.2E-10 1.1E-14 110.4 11.3 42 26-67 12-53 (360)
80 4a9w_A Monooxygenase; baeyer-v 99.1 2.8E-10 9.7E-15 110.5 10.5 40 28-67 3-42 (357)
81 1rp0_A ARA6, thiazole biosynth 99.1 2.5E-10 8.7E-15 107.1 9.2 40 27-66 38-78 (284)
82 2qcu_A Aerobic glycerol-3-phos 99.1 1.4E-08 4.6E-13 103.3 22.6 38 28-65 3-40 (501)
83 3lzw_A Ferredoxin--NADP reduct 99.1 2.9E-10 9.9E-15 109.3 9.6 40 28-67 7-46 (332)
84 2dkh_A 3-hydroxybenzoate hydro 99.1 1.7E-09 5.9E-14 113.2 15.8 38 27-64 31-69 (639)
85 3f8d_A Thioredoxin reductase ( 99.0 9.2E-10 3.1E-14 105.3 11.9 41 253-294 84-124 (323)
86 2gv8_A Monooxygenase; FMO, FAD 99.0 1.4E-09 4.7E-14 109.1 13.4 41 27-67 5-47 (447)
87 1pj5_A N,N-dimethylglycine oxi 99.0 1.5E-09 5.2E-14 117.3 14.1 50 245-295 156-207 (830)
88 1d4d_A Flavocytochrome C fumar 99.0 1.3E-09 4.5E-14 112.5 11.9 41 27-67 125-165 (572)
89 3itj_A Thioredoxin reductase 1 99.0 6.2E-10 2.1E-14 107.3 8.6 43 25-67 19-65 (338)
90 3axb_A Putative oxidoreductase 99.0 6.2E-10 2.1E-14 111.8 8.1 38 28-65 23-61 (448)
91 3jsk_A Cypbp37 protein; octame 99.0 1.1E-09 3.6E-14 103.8 9.0 41 27-67 78-120 (344)
92 3c96_A Flavin-containing monoo 99.0 2.3E-09 7.7E-14 106.3 11.5 38 27-64 3-41 (410)
93 3alj_A 2-methyl-3-hydroxypyrid 99.0 2.3E-09 7.8E-14 105.1 11.3 38 28-65 11-48 (379)
94 4fk1_A Putative thioredoxin re 99.0 4.2E-09 1.4E-13 99.9 12.4 39 27-66 5-43 (304)
95 3o0h_A Glutathione reductase; 99.0 3.9E-09 1.3E-13 106.9 12.7 49 246-294 238-287 (484)
96 2e1m_B L-glutamate oxidase; L- 98.9 5.9E-11 2E-15 95.0 -1.7 108 280-402 4-112 (130)
97 2q0l_A TRXR, thioredoxin reduc 98.9 5.7E-09 2E-13 99.2 11.6 41 253-294 73-113 (311)
98 2h88_A Succinate dehydrogenase 98.9 2E-08 6.7E-13 103.9 16.0 40 27-66 17-56 (621)
99 4a5l_A Thioredoxin reductase; 98.9 4.9E-09 1.7E-13 99.9 10.6 41 25-66 1-41 (314)
100 2ywl_A Thioredoxin reductase r 98.9 1.1E-08 3.6E-13 88.9 11.4 40 253-294 70-109 (180)
101 2wdq_A Succinate dehydrogenase 98.9 2.5E-08 8.5E-13 103.0 15.9 40 27-66 6-45 (588)
102 2bs2_A Quinol-fumarate reducta 98.9 2.3E-08 7.8E-13 104.2 15.5 39 28-66 5-43 (660)
103 2xve_A Flavin-containing monoo 98.9 1.1E-08 3.6E-13 103.0 12.4 41 28-68 2-48 (464)
104 2q7v_A Thioredoxin reductase; 98.9 7.3E-09 2.5E-13 99.2 10.6 41 26-67 6-46 (325)
105 1pn0_A Phenol 2-monooxygenase; 98.9 5.4E-08 1.8E-12 102.0 17.9 35 28-62 8-47 (665)
106 2gjc_A Thiazole biosynthetic e 98.9 5.6E-09 1.9E-13 98.3 9.4 40 28-67 65-106 (326)
107 1chu_A Protein (L-aspartate ox 98.9 1.3E-08 4.4E-13 104.1 12.8 39 27-66 7-45 (540)
108 3l8k_A Dihydrolipoyl dehydroge 98.9 1.3E-08 4.6E-13 102.4 12.8 41 27-67 3-43 (466)
109 2bry_A NEDD9 interacting prote 98.9 4.4E-09 1.5E-13 106.6 9.2 40 26-65 90-129 (497)
110 3fbs_A Oxidoreductase; structu 98.9 1.6E-08 5.6E-13 95.3 12.6 35 28-62 2-36 (297)
111 3d1c_A Flavin-containing putat 98.9 5.1E-09 1.7E-13 102.2 9.3 42 253-295 102-143 (369)
112 2a87_A TRXR, TR, thioredoxin r 98.8 7.4E-09 2.5E-13 99.7 9.9 40 26-66 12-51 (335)
113 2rgh_A Alpha-glycerophosphate 98.8 3.8E-08 1.3E-12 101.4 15.6 39 27-65 31-69 (571)
114 3cty_A Thioredoxin reductase; 98.8 1E-08 3.5E-13 97.9 10.2 42 25-67 13-54 (319)
115 3fpz_A Thiazole biosynthetic e 98.8 1.5E-09 5.1E-14 104.1 3.7 68 28-105 65-134 (326)
116 2cul_A Glucose-inhibited divis 98.8 2.2E-08 7.4E-13 90.8 10.9 42 253-295 83-125 (232)
117 3s5w_A L-ornithine 5-monooxyge 98.8 1.1E-08 3.9E-13 103.1 9.9 38 27-64 29-71 (463)
118 1trb_A Thioredoxin reductase; 98.8 1.2E-08 4.2E-13 97.4 9.3 40 27-67 4-43 (320)
119 3lxd_A FAD-dependent pyridine 98.8 3.9E-08 1.3E-12 97.5 12.8 43 252-294 207-250 (415)
120 2e5v_A L-aspartate oxidase; ar 98.8 3.2E-08 1.1E-12 99.6 12.2 36 30-66 1-36 (472)
121 1kf6_A Fumarate reductase flav 98.8 7.3E-08 2.5E-12 99.7 14.4 38 28-65 5-44 (602)
122 1vdc_A NTR, NADPH dependent th 98.7 1.5E-08 5E-13 97.4 8.2 40 253-294 84-123 (333)
123 3r9u_A Thioredoxin reductase; 98.7 2.4E-08 8.4E-13 94.9 9.7 40 27-67 3-43 (315)
124 1dxl_A Dihydrolipoamide dehydr 98.7 4.9E-08 1.7E-12 98.5 12.4 42 26-67 4-45 (470)
125 3cp8_A TRNA uridine 5-carboxym 98.7 3.8E-08 1.3E-12 100.8 10.7 41 25-65 18-59 (641)
126 1ojt_A Surface protein; redox- 98.7 3.6E-08 1.2E-12 99.8 10.5 43 25-67 3-45 (482)
127 2zxi_A TRNA uridine 5-carboxym 98.7 4.3E-08 1.5E-12 100.0 10.9 48 246-294 129-179 (637)
128 1v59_A Dihydrolipoamide dehydr 98.7 1.8E-08 6.2E-13 101.9 8.0 41 27-67 4-44 (478)
129 4gcm_A TRXR, thioredoxin reduc 98.7 6.9E-09 2.3E-13 98.8 4.6 42 25-67 2-44 (312)
130 1fl2_A Alkyl hydroperoxide red 98.7 4.1E-08 1.4E-12 93.2 9.8 42 253-294 70-114 (310)
131 3ces_A MNMG, tRNA uridine 5-ca 98.7 4E-08 1.4E-12 100.7 10.2 49 246-295 130-181 (651)
132 2aqj_A Tryptophan halogenase, 98.7 8.8E-08 3E-12 98.3 12.6 44 252-296 178-223 (538)
133 2weu_A Tryptophan 5-halogenase 98.7 5.3E-08 1.8E-12 99.4 10.9 44 252-296 186-231 (511)
134 1jnr_A Adenylylsulfate reducta 98.7 3.8E-07 1.3E-11 95.3 17.5 36 27-62 21-60 (643)
135 3fg2_P Putative rubredoxin red 98.7 1.2E-07 4.2E-12 93.5 12.9 43 252-294 197-240 (404)
136 1hyu_A AHPF, alkyl hydroperoxi 98.7 7.3E-08 2.5E-12 98.3 10.7 39 27-67 211-249 (521)
137 1ebd_A E3BD, dihydrolipoamide 98.7 9.4E-08 3.2E-12 96.0 11.3 40 27-67 2-41 (455)
138 2e4g_A Tryptophan halogenase; 98.6 1.2E-07 4.2E-12 97.4 12.0 50 246-296 200-253 (550)
139 3ics_A Coenzyme A-disulfide re 98.6 9.9E-08 3.4E-12 99.1 10.7 39 26-64 34-74 (588)
140 3oc4_A Oxidoreductase, pyridin 98.6 8.4E-08 2.9E-12 96.2 9.5 36 29-64 3-40 (452)
141 3gyx_A Adenylylsulfate reducta 98.6 3.6E-07 1.2E-11 95.1 14.3 37 28-64 22-64 (662)
142 2a8x_A Dihydrolipoyl dehydroge 98.6 1.6E-07 5.3E-12 94.6 10.1 39 28-67 3-41 (464)
143 3iwa_A FAD-dependent pyridine 98.6 1.1E-07 3.7E-12 96.0 8.8 37 28-64 3-41 (472)
144 3klj_A NAD(FAD)-dependent dehy 98.5 1.9E-07 6.6E-12 91.2 9.6 39 26-64 7-45 (385)
145 3h8l_A NADH oxidase; membrane 98.5 2.3E-07 7.7E-12 91.8 9.8 36 28-63 1-39 (409)
146 2bc0_A NADH oxidase; flavoprot 98.5 2.6E-07 8.8E-12 93.6 9.6 38 27-64 34-74 (490)
147 3ntd_A FAD-dependent pyridine 98.5 3E-07 1E-11 95.1 10.1 37 28-64 1-39 (565)
148 1q1r_A Putidaredoxin reductase 98.5 4.7E-07 1.6E-11 90.0 10.8 36 27-62 3-40 (431)
149 1c0p_A D-amino acid oxidase; a 98.5 1.2E-07 4.1E-12 92.2 6.1 40 25-64 3-42 (363)
150 3qfa_A Thioredoxin reductase 1 98.5 8.5E-08 2.9E-12 97.8 5.1 55 13-67 17-79 (519)
151 3urh_A Dihydrolipoyl dehydroge 98.5 7E-08 2.4E-12 97.9 4.3 41 27-67 24-64 (491)
152 4b63_A L-ornithine N5 monooxyg 98.4 3.9E-07 1.3E-11 92.4 8.3 41 25-65 36-76 (501)
153 3qvp_A Glucose oxidase; oxidor 98.4 2.4E-06 8.3E-11 87.5 14.0 36 26-61 17-53 (583)
154 2vdc_G Glutamate synthase [NAD 98.4 2.4E-07 8.1E-12 92.6 5.6 42 26-67 120-161 (456)
155 3cgb_A Pyridine nucleotide-dis 98.4 7.3E-07 2.5E-11 90.0 9.2 42 253-294 107-151 (480)
156 4dna_A Probable glutathione re 98.4 1.6E-07 5.4E-12 94.5 4.0 40 27-67 4-43 (463)
157 1nhp_A NADH peroxidase; oxidor 98.4 8.5E-07 2.9E-11 88.8 9.2 36 29-64 1-38 (447)
158 1mo9_A ORF3; nucleotide bindin 98.4 2.2E-07 7.6E-12 94.8 4.9 44 25-68 40-83 (523)
159 2qae_A Lipoamide, dihydrolipoy 98.3 2.3E-07 8E-12 93.4 4.2 41 28-68 2-42 (468)
160 3k30_A Histamine dehydrogenase 98.3 3.7E-07 1.3E-11 96.4 5.8 44 26-69 389-432 (690)
161 2v3a_A Rubredoxin reductase; a 98.3 3.6E-06 1.2E-10 82.4 12.2 43 252-294 200-242 (384)
162 3lad_A Dihydrolipoamide dehydr 98.3 3.2E-07 1.1E-11 92.7 4.7 41 27-67 2-42 (476)
163 2r9z_A Glutathione amide reduc 98.3 3.7E-07 1.2E-11 91.8 4.3 49 246-294 213-263 (463)
164 3g3e_A D-amino-acid oxidase; F 98.3 3E-07 1E-11 88.9 3.5 37 29-65 1-43 (351)
165 2yqu_A 2-oxoglutarate dehydrog 98.3 5E-06 1.7E-10 83.4 12.4 42 253-294 222-263 (455)
166 3dgz_A Thioredoxin reductase 2 98.3 3.7E-07 1.3E-11 92.5 4.1 42 26-67 4-53 (488)
167 1zmd_A Dihydrolipoyl dehydroge 98.3 3.2E-07 1.1E-11 92.6 3.6 41 27-67 5-45 (474)
168 3c4n_A Uncharacterized protein 98.3 4.4E-07 1.5E-11 89.5 4.5 49 246-295 178-236 (405)
169 1zk7_A HGII, reductase, mercur 98.3 7.1E-07 2.4E-11 89.9 5.9 42 26-68 2-43 (467)
170 1ges_A Glutathione reductase; 98.3 3.4E-07 1.2E-11 91.7 3.5 40 27-67 3-42 (450)
171 3ihm_A Styrene monooxygenase A 98.2 6E-07 2E-11 89.3 4.6 35 27-61 21-55 (430)
172 2yqu_A 2-oxoglutarate dehydrog 98.2 7.5E-07 2.6E-11 89.4 5.0 40 28-67 1-40 (455)
173 3dk9_A Grase, GR, glutathione 98.2 4.4E-07 1.5E-11 91.7 3.3 40 27-67 19-58 (478)
174 1o94_A Tmadh, trimethylamine d 98.2 1E-06 3.6E-11 93.4 6.2 43 26-68 387-429 (729)
175 2wpf_A Trypanothione reductase 98.2 3.7E-07 1.3E-11 92.5 2.7 49 246-294 241-291 (495)
176 2hqm_A GR, grase, glutathione 98.2 5.7E-07 1.9E-11 90.8 3.6 41 27-68 10-50 (479)
177 3ic9_A Dihydrolipoamide dehydr 98.2 5.5E-07 1.9E-11 91.2 3.5 39 28-67 8-46 (492)
178 3c4a_A Probable tryptophan hyd 98.2 1.1E-06 3.6E-11 86.1 5.4 35 29-63 1-37 (381)
179 1fec_A Trypanothione reductase 98.2 6.4E-07 2.2E-11 90.6 3.8 49 246-294 237-287 (490)
180 1ges_A Glutathione reductase; 98.2 1.1E-05 3.8E-10 80.6 12.7 43 252-294 221-264 (450)
181 3dgh_A TRXR-1, thioredoxin red 98.2 9.1E-07 3.1E-11 89.5 4.6 34 26-59 7-40 (483)
182 1lvl_A Dihydrolipoamide dehydr 98.2 6.1E-07 2.1E-11 90.0 3.1 41 27-68 4-44 (458)
183 3pl8_A Pyranose 2-oxidase; sub 98.2 1.2E-06 4.2E-11 90.9 5.2 41 27-67 45-85 (623)
184 2eq6_A Pyruvate dehydrogenase 98.2 1.2E-05 4.1E-10 80.7 12.2 43 252-294 223-270 (464)
185 2r9z_A Glutathione amide reduc 98.2 1.4E-05 4.8E-10 80.2 12.7 36 28-63 166-201 (463)
186 1onf_A GR, grase, glutathione 98.1 9.8E-07 3.3E-11 89.6 4.1 39 28-67 2-40 (500)
187 1xdi_A RV3303C-LPDA; reductase 98.1 9.7E-07 3.3E-11 89.6 3.7 49 246-294 229-278 (499)
188 3vrd_B FCCB subunit, flavocyto 98.1 1.8E-06 6.3E-11 85.0 5.6 43 439-481 284-327 (401)
189 3ef6_A Toluene 1,2-dioxygenase 98.1 1.2E-05 4.3E-10 79.2 10.9 43 252-294 198-240 (410)
190 3g5s_A Methylenetetrahydrofola 98.1 2.8E-06 9.5E-11 80.9 5.6 38 28-65 1-38 (443)
191 2eq6_A Pyruvate dehydrogenase 98.1 1.6E-06 5.4E-11 87.2 4.0 39 28-67 6-44 (464)
192 1ebd_A E3BD, dihydrolipoamide 98.1 1.9E-05 6.5E-10 79.1 11.8 36 28-63 170-205 (455)
193 1ps9_A 2,4-dienoyl-COA reducta 98.1 3E-06 1E-10 89.2 5.8 42 26-67 371-412 (671)
194 2hqm_A GR, grase, glutathione 98.1 2.6E-05 9E-10 78.6 12.3 42 252-293 239-283 (479)
195 2pyx_A Tryptophan halogenase; 98.0 3.1E-06 1.1E-10 86.5 5.4 50 246-296 181-234 (526)
196 1xdi_A RV3303C-LPDA; reductase 98.0 3.3E-05 1.1E-09 78.3 12.5 36 28-63 182-217 (499)
197 1q1r_A Putidaredoxin reductase 98.0 3E-05 1E-09 77.0 11.8 42 253-294 205-249 (431)
198 4b1b_A TRXR, thioredoxin reduc 98.0 2.5E-06 8.7E-11 86.7 3.8 46 247-292 270-316 (542)
199 1nhp_A NADH peroxidase; oxidor 98.0 2.4E-05 8.1E-10 78.2 10.7 37 27-63 148-184 (447)
200 1v59_A Dihydrolipoamide dehydr 98.0 2.6E-05 9E-10 78.6 10.9 37 28-64 183-219 (478)
201 3ic9_A Dihydrolipoamide dehydr 98.0 4.3E-05 1.5E-09 77.3 12.4 46 249-294 224-273 (492)
202 1onf_A GR, grase, glutathione 98.0 4E-05 1.4E-09 77.6 12.2 43 252-294 230-274 (500)
203 2gqw_A Ferredoxin reductase; f 98.0 3.7E-05 1.3E-09 75.7 11.6 36 28-63 145-180 (408)
204 2gag_A Heterotetrameric sarcos 98.0 3.3E-06 1.1E-10 92.2 4.3 41 28-68 128-168 (965)
205 1ojt_A Surface protein; redox- 98.0 2.4E-05 8.2E-10 78.9 10.3 43 252-294 239-285 (482)
206 1gte_A Dihydropyrimidine dehyd 98.0 4.8E-06 1.6E-10 91.6 5.5 41 27-67 186-227 (1025)
207 3t37_A Probable dehydrogenase; 98.0 4.1E-06 1.4E-10 85.7 4.4 36 26-61 15-51 (526)
208 3h28_A Sulfide-quinone reducta 98.0 4.3E-06 1.5E-10 83.1 4.4 38 28-65 2-41 (430)
209 1mo9_A ORF3; nucleotide bindin 98.0 3.8E-05 1.3E-09 78.2 11.5 43 252-294 268-315 (523)
210 2a8x_A Dihydrolipoyl dehydroge 97.9 5.5E-05 1.9E-09 75.9 12.4 42 253-294 226-270 (464)
211 3iwa_A FAD-dependent pyridine 97.9 5E-05 1.7E-09 76.4 12.0 43 252-294 215-257 (472)
212 1lqt_A FPRA; NADP+ derivative, 97.9 4.5E-06 1.5E-10 83.4 4.1 41 28-68 3-50 (456)
213 2wpf_A Trypanothione reductase 97.9 5.4E-05 1.8E-09 76.6 12.0 36 28-63 191-229 (495)
214 1fec_A Trypanothione reductase 97.9 4.7E-05 1.6E-09 76.9 11.5 36 28-63 187-225 (490)
215 3oc4_A Oxidoreductase, pyridin 97.9 6.4E-05 2.2E-09 75.1 12.3 42 252-294 202-243 (452)
216 3kd9_A Coenzyme A disulfide re 97.9 6.8E-06 2.3E-10 82.2 5.1 39 28-66 3-43 (449)
217 1y56_A Hypothetical protein PH 97.9 3.5E-06 1.2E-10 85.2 3.0 40 28-68 108-147 (493)
218 1cjc_A Protein (adrenodoxin re 97.9 6.9E-06 2.4E-10 82.2 4.8 41 27-67 5-47 (460)
219 1lvl_A Dihydrolipoamide dehydr 97.9 2.7E-05 9.3E-10 78.0 9.2 36 28-63 171-206 (458)
220 1zmd_A Dihydrolipoyl dehydroge 97.9 5.5E-05 1.9E-09 76.1 11.5 37 28-64 178-214 (474)
221 2qae_A Lipoamide, dihydrolipoy 97.9 7E-05 2.4E-09 75.2 12.2 43 252-294 229-275 (468)
222 2x8g_A Thioredoxin glutathione 97.9 7.8E-06 2.7E-10 84.9 5.2 34 26-59 105-138 (598)
223 3ntd_A FAD-dependent pyridine 97.9 9.3E-05 3.2E-09 76.3 13.0 35 28-62 151-185 (565)
224 2cdu_A NADPH oxidase; flavoenz 97.9 6.6E-05 2.2E-09 75.1 11.5 35 28-62 149-183 (452)
225 1ju2_A HydroxynitrIle lyase; f 97.9 4.1E-06 1.4E-10 85.5 2.6 37 26-63 24-60 (536)
226 1kdg_A CDH, cellobiose dehydro 97.9 1E-05 3.5E-10 83.0 5.3 37 26-62 5-41 (546)
227 3ef6_A Toluene 1,2-dioxygenase 97.8 1.4E-05 4.7E-10 78.9 5.8 40 253-294 71-110 (410)
228 1m6i_A Programmed cell death p 97.8 7E-05 2.4E-09 75.6 10.9 43 252-294 239-281 (493)
229 1dxl_A Dihydrolipoamide dehydr 97.8 5.5E-05 1.9E-09 76.0 10.1 37 27-63 176-212 (470)
230 2v3a_A Rubredoxin reductase; a 97.8 1.3E-05 4.4E-10 78.4 5.0 35 27-61 3-39 (384)
231 2cdu_A NADPH oxidase; flavoenz 97.8 1.3E-05 4.3E-10 80.3 5.0 37 29-65 1-39 (452)
232 2bc0_A NADH oxidase; flavoprot 97.8 9.8E-05 3.4E-09 74.6 11.4 36 27-62 193-228 (490)
233 3lad_A Dihydrolipoamide dehydr 97.8 0.00014 4.9E-09 73.1 12.5 43 252-294 234-279 (476)
234 3sx6_A Sulfide-quinone reducta 97.8 1.1E-05 3.9E-10 80.2 4.3 37 26-62 2-41 (437)
235 2gqw_A Ferredoxin reductase; f 97.8 1.7E-05 5.7E-10 78.2 5.1 38 27-64 6-45 (408)
236 1zk7_A HGII, reductase, mercur 97.8 0.00014 4.7E-09 73.0 11.8 42 252-294 229-270 (467)
237 4b1b_A TRXR, thioredoxin reduc 97.8 0.00014 4.7E-09 74.0 11.8 34 27-60 222-255 (542)
238 3urh_A Dihydrolipoyl dehydroge 97.8 0.00011 3.9E-09 74.2 11.1 37 27-63 197-233 (491)
239 1m6i_A Programmed cell death p 97.7 1.7E-05 5.8E-10 80.2 4.5 40 25-64 8-49 (493)
240 3cgb_A Pyridine nucleotide-dis 97.7 0.00011 3.7E-09 74.0 10.3 37 27-63 185-221 (480)
241 4dna_A Probable glutathione re 97.7 0.00017 5.9E-09 72.2 11.6 42 252-294 224-267 (463)
242 4g6h_A Rotenone-insensitive NA 97.7 2.3E-05 7.8E-10 79.3 5.1 38 25-62 39-76 (502)
243 3q9t_A Choline dehydrogenase a 97.7 2.3E-05 7.8E-10 80.3 4.4 37 26-62 4-41 (577)
244 1xhc_A NADH oxidase /nitrite r 97.7 2.7E-05 9.3E-10 75.5 4.7 35 28-63 8-42 (367)
245 1n4w_A CHOD, cholesterol oxida 97.7 3.2E-05 1.1E-09 78.4 5.0 38 27-64 4-41 (504)
246 3ics_A Coenzyme A-disulfide re 97.6 0.00024 8.4E-09 73.5 11.6 35 28-62 187-221 (588)
247 3dk9_A Grase, GR, glutathione 97.6 0.0003 1E-08 70.8 11.7 35 28-62 187-221 (478)
248 3l8k_A Dihydrolipoyl dehydroge 97.6 0.00042 1.4E-08 69.4 12.1 41 254-294 226-271 (466)
249 3kd9_A Coenzyme A disulfide re 97.6 0.00039 1.3E-08 69.4 11.4 35 28-62 148-182 (449)
250 1xhc_A NADH oxidase /nitrite r 97.5 0.00021 7.2E-09 69.1 8.8 35 29-63 144-178 (367)
251 4eqs_A Coenzyme A disulfide re 97.5 4.9E-05 1.7E-09 75.5 4.3 45 245-293 193-238 (437)
252 1trb_A Thioredoxin reductase; 97.5 0.00064 2.2E-08 64.2 11.8 34 28-61 145-178 (320)
253 3hyw_A Sulfide-quinone reducta 97.5 6.1E-05 2.1E-09 74.7 4.6 35 28-62 2-38 (430)
254 1coy_A Cholesterol oxidase; ox 97.5 6.5E-05 2.2E-09 76.1 4.9 37 26-62 9-45 (507)
255 3s5w_A L-ornithine 5-monooxyge 97.5 0.00092 3.2E-08 66.9 13.3 43 252-294 329-376 (463)
256 4eqs_A Coenzyme A disulfide re 97.5 0.00038 1.3E-08 69.1 9.9 37 28-64 147-183 (437)
257 3fim_B ARYL-alcohol oxidase; A 97.5 4.6E-05 1.6E-09 77.9 3.0 36 28-63 2-38 (566)
258 3dgh_A TRXR-1, thioredoxin red 97.4 0.00088 3E-08 67.4 12.3 32 28-59 187-218 (483)
259 2jbv_A Choline oxidase; alcoho 97.4 9.2E-05 3.2E-09 75.7 4.6 37 27-63 12-49 (546)
260 1gpe_A Protein (glucose oxidas 97.4 0.00012 4E-09 75.6 4.8 37 27-63 23-60 (587)
261 3d1c_A Flavin-containing putat 97.4 0.00069 2.3E-08 65.5 10.0 41 254-294 230-271 (369)
262 3uox_A Otemo; baeyer-villiger 97.3 0.0041 1.4E-07 63.4 15.9 36 27-62 184-219 (545)
263 2q0l_A TRXR, thioredoxin reduc 97.3 0.0013 4.5E-08 61.8 11.5 34 28-61 143-176 (311)
264 3gwf_A Cyclohexanone monooxyge 97.3 0.0019 6.4E-08 65.8 13.1 37 26-62 176-212 (540)
265 3dgz_A Thioredoxin reductase 2 97.3 0.0014 4.8E-08 66.0 12.1 33 28-60 185-217 (488)
266 3itj_A Thioredoxin reductase 1 97.3 0.0008 2.7E-08 64.0 9.5 36 27-62 172-207 (338)
267 2zbw_A Thioredoxin reductase; 97.3 0.0019 6.4E-08 61.5 11.9 35 27-61 151-185 (335)
268 4ap3_A Steroid monooxygenase; 97.2 0.0029 1E-07 64.5 13.3 36 27-62 190-225 (549)
269 2q7v_A Thioredoxin reductase; 97.2 0.0022 7.6E-08 60.7 11.5 34 28-61 152-185 (325)
270 1fl2_A Alkyl hydroperoxide red 97.2 0.0018 6.1E-08 60.8 10.7 35 28-62 144-178 (310)
271 3cty_A Thioredoxin reductase; 97.1 0.0023 7.7E-08 60.4 10.9 34 28-61 155-188 (319)
272 3ab1_A Ferredoxin--NADP reduct 97.1 0.0021 7.3E-08 61.8 10.2 35 28-62 163-197 (360)
273 3f8d_A Thioredoxin reductase ( 97.1 0.0027 9.2E-08 59.8 10.7 35 27-61 153-187 (323)
274 4g6h_A Rotenone-insensitive NA 97.0 0.0012 4.1E-08 66.6 8.2 41 253-293 286-330 (502)
275 3lzw_A Ferredoxin--NADP reduct 97.0 0.0022 7.4E-08 60.8 9.6 34 28-61 154-187 (332)
276 3r9u_A Thioredoxin reductase; 97.0 0.0034 1.2E-07 58.9 10.4 35 28-62 147-181 (315)
277 3qfa_A Thioredoxin reductase 1 96.9 0.0054 1.8E-07 62.2 11.8 32 28-59 210-241 (519)
278 2x8g_A Thioredoxin glutathione 96.9 0.0072 2.5E-07 62.5 12.6 33 28-60 286-318 (598)
279 1hyu_A AHPF, alkyl hydroperoxi 96.8 0.0051 1.8E-07 62.4 10.1 35 28-62 355-389 (521)
280 3fbs_A Oxidoreductase; structu 96.7 0.0056 1.9E-07 56.8 9.3 38 440-479 256-293 (297)
281 3k30_A Histamine dehydrogenase 96.7 0.0034 1.1E-07 66.1 8.1 38 27-64 522-561 (690)
282 4gcm_A TRXR, thioredoxin reduc 96.3 0.0037 1.3E-07 58.8 5.2 35 28-62 145-179 (312)
283 3fwz_A Inner membrane protein 96.2 0.0079 2.7E-07 49.0 6.1 37 25-61 4-40 (140)
284 3klj_A NAD(FAD)-dependent dehy 96.2 0.0032 1.1E-07 61.2 4.2 37 28-64 146-182 (385)
285 2g1u_A Hypothetical protein TM 96.1 0.0074 2.5E-07 50.1 5.4 35 27-61 18-52 (155)
286 3ic5_A Putative saccharopine d 95.9 0.0076 2.6E-07 47.1 4.7 34 27-60 4-38 (118)
287 1lss_A TRK system potassium up 95.9 0.0086 2.9E-07 48.5 5.1 33 28-60 4-36 (140)
288 3llv_A Exopolyphosphatase-rela 95.8 0.0099 3.4E-07 48.4 5.2 34 28-61 6-39 (141)
289 4a5l_A Thioredoxin reductase; 95.7 0.01 3.4E-07 55.7 5.1 35 27-61 151-185 (314)
290 2x5o_A UDP-N-acetylmuramoylala 95.6 0.0075 2.6E-07 59.7 4.2 36 28-63 5-40 (439)
291 3lk7_A UDP-N-acetylmuramoylala 95.4 0.013 4.4E-07 58.2 4.9 35 27-61 8-42 (451)
292 3ado_A Lambda-crystallin; L-gu 95.4 0.015 5.3E-07 54.2 5.1 35 27-61 5-39 (319)
293 1id1_A Putative potassium chan 95.3 0.023 8E-07 46.9 5.5 33 28-60 3-35 (153)
294 2hmt_A YUAA protein; RCK, KTN, 95.1 0.02 6.8E-07 46.5 4.6 33 28-60 6-38 (144)
295 4e12_A Diketoreductase; oxidor 95.1 0.025 8.4E-07 52.2 5.6 34 28-61 4-37 (283)
296 4dll_A 2-hydroxy-3-oxopropiona 95.1 0.019 6.5E-07 54.1 4.8 35 26-60 29-63 (320)
297 1f0y_A HCDH, L-3-hydroxyacyl-C 95.0 0.027 9.1E-07 52.6 5.6 33 28-60 15-47 (302)
298 1ps9_A 2,4-dienoyl-COA reducta 95.0 0.092 3.2E-06 54.9 10.2 40 252-294 586-627 (671)
299 3i83_A 2-dehydropantoate 2-red 94.9 0.025 8.6E-07 53.3 5.2 34 28-61 2-35 (320)
300 1kyq_A Met8P, siroheme biosynt 94.8 0.021 7.2E-07 52.0 4.2 35 27-61 12-46 (274)
301 3c85_A Putative glutathione-re 94.7 0.03 1E-06 47.8 4.8 34 28-61 39-73 (183)
302 2ewd_A Lactate dehydrogenase,; 94.7 0.029 1E-06 52.7 5.0 36 26-61 2-38 (317)
303 3doj_A AT3G25530, dehydrogenas 94.7 0.034 1.2E-06 52.1 5.4 36 26-61 19-54 (310)
304 2dpo_A L-gulonate 3-dehydrogen 94.7 0.031 1.1E-06 52.4 5.1 34 28-61 6-39 (319)
305 3vtf_A UDP-glucose 6-dehydroge 94.6 0.033 1.1E-06 54.4 5.3 43 17-60 11-53 (444)
306 3hn2_A 2-dehydropantoate 2-red 94.5 0.026 9E-07 52.9 4.2 34 28-61 2-35 (312)
307 3lxd_A FAD-dependent pyridine 94.5 0.04 1.4E-06 53.9 5.8 37 28-64 152-188 (415)
308 3dfz_A SIRC, precorrin-2 dehyd 94.5 0.036 1.2E-06 48.8 4.8 34 27-60 30-63 (223)
309 1t2d_A LDH-P, L-lactate dehydr 94.5 0.043 1.5E-06 51.6 5.6 36 26-61 2-38 (322)
310 2xve_A Flavin-containing monoo 94.5 0.034 1.2E-06 55.3 5.2 36 27-62 196-231 (464)
311 4dio_A NAD(P) transhydrogenase 94.5 0.042 1.4E-06 52.9 5.5 35 27-61 189-223 (405)
312 1vdc_A NTR, NADPH dependent th 94.4 0.036 1.2E-06 52.3 5.1 37 27-63 158-194 (333)
313 2a87_A TRXR, TR, thioredoxin r 94.4 0.039 1.3E-06 52.2 5.2 37 27-63 154-190 (335)
314 2raf_A Putative dinucleotide-b 94.4 0.046 1.6E-06 47.8 5.2 36 27-62 18-53 (209)
315 3eag_A UDP-N-acetylmuramate:L- 94.3 0.042 1.4E-06 51.8 5.2 35 27-61 3-38 (326)
316 3fg2_P Putative rubredoxin red 94.3 0.041 1.4E-06 53.7 5.3 37 28-64 142-178 (404)
317 3gg2_A Sugar dehydrogenase, UD 94.3 0.041 1.4E-06 54.3 5.2 32 29-60 3-34 (450)
318 2hjr_A Malate dehydrogenase; m 94.2 0.049 1.7E-06 51.3 5.5 35 27-61 13-48 (328)
319 3l4b_C TRKA K+ channel protien 94.2 0.037 1.3E-06 48.8 4.4 33 29-61 1-33 (218)
320 3k6j_A Protein F01G10.3, confi 94.2 0.055 1.9E-06 53.2 5.8 36 27-62 53-88 (460)
321 2y0c_A BCEC, UDP-glucose dehyd 94.1 0.044 1.5E-06 54.6 5.2 33 28-60 8-40 (478)
322 3g79_A NDP-N-acetyl-D-galactos 94.1 0.038 1.3E-06 54.7 4.5 36 27-62 17-54 (478)
323 1zej_A HBD-9, 3-hydroxyacyl-CO 94.1 0.05 1.7E-06 50.2 5.0 34 27-61 11-44 (293)
324 1lld_A L-lactate dehydrogenase 94.0 0.051 1.8E-06 51.1 5.2 35 27-61 6-42 (319)
325 2ew2_A 2-dehydropantoate 2-red 94.0 0.049 1.7E-06 51.0 5.0 33 28-60 3-35 (316)
326 1ks9_A KPA reductase;, 2-dehyd 94.0 0.057 2E-06 49.8 5.3 32 30-61 2-33 (291)
327 1pzg_A LDH, lactate dehydrogen 94.0 0.059 2E-06 50.8 5.4 34 28-61 9-43 (331)
328 3g17_A Similar to 2-dehydropan 94.0 0.037 1.3E-06 51.4 3.9 34 28-61 2-35 (294)
329 3p2y_A Alanine dehydrogenase/p 94.0 0.044 1.5E-06 52.3 4.5 35 27-61 183-217 (381)
330 3qha_A Putative oxidoreductase 93.9 0.039 1.3E-06 51.3 4.1 37 25-61 12-48 (296)
331 2gv8_A Monooxygenase; FMO, FAD 93.9 0.049 1.7E-06 53.9 5.0 37 27-63 211-248 (447)
332 3ghy_A Ketopantoate reductase 93.8 0.061 2.1E-06 50.9 5.2 33 28-60 3-35 (335)
333 3dtt_A NADP oxidoreductase; st 93.7 0.072 2.5E-06 47.9 5.3 34 27-60 18-51 (245)
334 3k96_A Glycerol-3-phosphate de 93.7 0.064 2.2E-06 51.1 5.1 33 28-60 29-61 (356)
335 2vdc_G Glutamate synthase [NAD 93.7 0.081 2.8E-06 52.4 6.0 36 27-62 263-299 (456)
336 3g0o_A 3-hydroxyisobutyrate de 93.6 0.071 2.4E-06 49.7 5.2 34 27-60 6-39 (303)
337 1zcj_A Peroxisomal bifunctiona 93.5 0.066 2.2E-06 53.2 5.1 34 28-61 37-70 (463)
338 4huj_A Uncharacterized protein 93.5 0.036 1.2E-06 49.0 2.9 45 14-59 10-55 (220)
339 3ego_A Probable 2-dehydropanto 93.5 0.069 2.4E-06 49.8 5.0 33 28-61 2-34 (307)
340 3hwr_A 2-dehydropantoate 2-red 93.5 0.071 2.4E-06 50.0 5.1 33 27-60 18-50 (318)
341 4a7p_A UDP-glucose dehydrogena 93.5 0.076 2.6E-06 52.2 5.4 34 28-61 8-41 (446)
342 1z82_A Glycerol-3-phosphate de 93.5 0.074 2.5E-06 50.3 5.2 34 27-60 13-46 (335)
343 3ldh_A Lactate dehydrogenase; 93.2 0.12 4E-06 48.5 5.9 34 27-60 20-55 (330)
344 3pid_A UDP-glucose 6-dehydroge 93.2 0.079 2.7E-06 51.6 4.9 34 26-60 34-67 (432)
345 4ffl_A PYLC; amino acid, biosy 93.1 0.095 3.2E-06 50.2 5.4 34 28-61 1-34 (363)
346 1bg6_A N-(1-D-carboxylethyl)-L 93.1 0.087 3E-06 50.3 5.2 33 28-60 4-36 (359)
347 2a9f_A Putative malic enzyme ( 93.1 0.079 2.7E-06 50.4 4.6 34 27-60 187-221 (398)
348 2v6b_A L-LDH, L-lactate dehydr 93.0 0.093 3.2E-06 48.8 5.0 33 29-61 1-35 (304)
349 3oj0_A Glutr, glutamyl-tRNA re 93.0 0.051 1.8E-06 44.3 2.9 33 28-60 21-53 (144)
350 3mog_A Probable 3-hydroxybutyr 93.0 0.093 3.2E-06 52.2 5.2 34 28-61 5-38 (483)
351 3pef_A 6-phosphogluconate dehy 93.0 0.095 3.2E-06 48.4 5.0 33 29-61 2-34 (287)
352 1ur5_A Malate dehydrogenase; o 93.0 0.1 3.6E-06 48.6 5.3 34 28-61 2-36 (309)
353 2q3e_A UDP-glucose 6-dehydroge 93.0 0.069 2.3E-06 53.1 4.2 36 25-60 2-39 (467)
354 2h78_A Hibadh, 3-hydroxyisobut 92.9 0.086 2.9E-06 49.0 4.5 34 27-60 2-35 (302)
355 1vpd_A Tartronate semialdehyde 92.8 0.086 2.9E-06 48.9 4.4 34 27-60 4-37 (299)
356 2vns_A Metalloreductase steap3 92.7 0.12 4.1E-06 45.3 5.1 34 27-60 27-60 (215)
357 1x13_A NAD(P) transhydrogenase 92.7 0.11 3.7E-06 50.5 5.1 34 28-61 172-205 (401)
358 1mv8_A GMD, GDP-mannose 6-dehy 92.7 0.083 2.8E-06 52.0 4.4 32 29-60 1-32 (436)
359 1vl6_A Malate oxidoreductase; 92.7 0.1 3.4E-06 49.6 4.6 34 27-60 191-225 (388)
360 4ezb_A Uncharacterized conserv 92.6 0.11 3.8E-06 48.7 5.0 35 27-61 23-58 (317)
361 3o0h_A Glutathione reductase; 92.6 0.12 4E-06 51.8 5.4 37 28-64 191-227 (484)
362 3l6d_A Putative oxidoreductase 92.6 0.13 4.6E-06 47.9 5.4 35 27-61 8-42 (306)
363 1l7d_A Nicotinamide nucleotide 92.6 0.13 4.3E-06 49.7 5.4 35 27-61 171-205 (384)
364 3pdu_A 3-hydroxyisobutyrate de 92.6 0.073 2.5E-06 49.1 3.6 33 29-61 2-34 (287)
365 4e21_A 6-phosphogluconate dehy 92.5 0.12 4.2E-06 49.2 5.2 34 27-60 21-54 (358)
366 3gvi_A Malate dehydrogenase; N 92.5 0.14 4.8E-06 47.9 5.4 34 28-61 7-41 (324)
367 3tl2_A Malate dehydrogenase; c 92.4 0.14 4.8E-06 47.8 5.2 33 28-60 8-41 (315)
368 3cky_A 2-hydroxymethyl glutara 92.4 0.11 3.8E-06 48.2 4.6 34 27-60 3-36 (301)
369 1pjc_A Protein (L-alanine dehy 92.3 0.15 5.1E-06 48.8 5.4 33 28-60 167-199 (361)
370 1y6j_A L-lactate dehydrogenase 92.3 0.14 4.7E-06 48.0 5.1 33 28-60 7-41 (318)
371 3qsg_A NAD-binding phosphogluc 92.1 0.11 3.8E-06 48.5 4.3 34 27-60 23-57 (312)
372 1guz_A Malate dehydrogenase; o 92.1 0.15 5.1E-06 47.6 5.1 33 29-61 1-35 (310)
373 2i6t_A Ubiquitin-conjugating e 92.1 0.12 4.3E-06 47.8 4.5 35 27-61 13-49 (303)
374 4aj2_A L-lactate dehydrogenase 92.1 0.19 6.5E-06 47.2 5.7 36 25-60 16-53 (331)
375 1dlj_A UDP-glucose dehydrogena 92.1 0.11 3.9E-06 50.4 4.4 30 30-60 2-31 (402)
376 1txg_A Glycerol-3-phosphate de 92.0 0.11 3.9E-06 48.9 4.3 30 30-59 2-31 (335)
377 2uyy_A N-PAC protein; long-cha 92.0 0.18 6.1E-06 47.2 5.6 34 28-61 30-63 (316)
378 1nyt_A Shikimate 5-dehydrogena 92.0 0.17 5.9E-06 46.2 5.3 33 28-60 119-151 (271)
379 3l9w_A Glutathione-regulated p 91.9 0.16 5.5E-06 49.4 5.2 35 27-61 3-37 (413)
380 2wtb_A MFP2, fatty acid multif 91.8 0.15 5E-06 53.6 5.2 34 27-60 311-344 (725)
381 2pv7_A T-protein [includes: ch 91.8 0.18 6.1E-06 46.8 5.3 35 27-61 20-55 (298)
382 2eez_A Alanine dehydrogenase; 91.8 0.18 6.3E-06 48.3 5.4 34 27-60 165-198 (369)
383 4gbj_A 6-phosphogluconate dehy 91.7 0.12 4.2E-06 47.8 4.0 36 26-61 3-38 (297)
384 1pjq_A CYSG, siroheme synthase 91.7 0.15 5.3E-06 50.3 4.9 34 27-60 11-44 (457)
385 3dfu_A Uncharacterized protein 91.7 0.057 2E-06 47.7 1.6 34 27-60 5-38 (232)
386 1cjc_A Protein (adrenodoxin re 91.7 0.15 5.1E-06 50.6 4.8 36 27-62 144-200 (460)
387 3pqe_A L-LDH, L-lactate dehydr 91.6 0.17 5.8E-06 47.4 4.8 34 27-60 4-39 (326)
388 3ggo_A Prephenate dehydrogenas 91.6 0.22 7.6E-06 46.5 5.7 34 28-61 33-68 (314)
389 2qyt_A 2-dehydropantoate 2-red 91.6 0.11 3.6E-06 48.7 3.5 31 29-59 9-45 (317)
390 3ius_A Uncharacterized conserv 91.5 0.16 5.6E-06 46.5 4.7 36 26-61 3-38 (286)
391 4g65_A TRK system potassium up 91.5 0.099 3.4E-06 51.8 3.3 34 28-61 3-36 (461)
392 1jay_A Coenzyme F420H2:NADP+ o 91.5 0.19 6.6E-06 43.8 4.9 31 30-60 2-33 (212)
393 4gwg_A 6-phosphogluconate dehy 91.5 0.18 6.1E-06 50.0 5.1 35 27-61 3-37 (484)
394 3c24_A Putative oxidoreductase 91.4 0.23 7.7E-06 45.7 5.5 33 28-60 11-44 (286)
395 2vhw_A Alanine dehydrogenase; 91.4 0.21 7.2E-06 48.0 5.4 34 27-60 167-200 (377)
396 1evy_A Glycerol-3-phosphate de 91.4 0.11 3.7E-06 49.9 3.4 31 30-60 17-47 (366)
397 3p7m_A Malate dehydrogenase; p 91.3 0.23 7.8E-06 46.5 5.4 34 28-61 5-39 (321)
398 1hyh_A L-hicdh, L-2-hydroxyiso 91.3 0.16 5.5E-06 47.4 4.4 32 29-60 2-35 (309)
399 1a5z_A L-lactate dehydrogenase 91.3 0.16 5.4E-06 47.6 4.3 32 29-60 1-34 (319)
400 2qrj_A Saccharopine dehydrogen 91.3 0.16 5.4E-06 48.5 4.2 40 27-66 213-257 (394)
401 2o3j_A UDP-glucose 6-dehydroge 91.2 0.13 4.5E-06 51.2 3.9 33 28-60 9-43 (481)
402 3phh_A Shikimate dehydrogenase 91.2 0.25 8.4E-06 44.8 5.3 34 28-61 118-151 (269)
403 3gt0_A Pyrroline-5-carboxylate 91.1 0.24 8.3E-06 44.4 5.2 33 28-60 2-38 (247)
404 2p4q_A 6-phosphogluconate dehy 91.0 0.22 7.6E-06 49.7 5.3 35 27-61 9-43 (497)
405 2rcy_A Pyrroline carboxylate r 91.0 0.2 6.9E-06 45.3 4.7 35 28-62 4-42 (262)
406 1yj8_A Glycerol-3-phosphate de 91.0 0.14 5E-06 49.2 3.8 35 28-62 21-62 (375)
407 2g5c_A Prephenate dehydrogenas 90.9 0.24 8.3E-06 45.4 5.2 32 29-60 2-35 (281)
408 2zyd_A 6-phosphogluconate dehy 90.9 0.18 6.3E-06 50.1 4.6 33 28-60 15-47 (480)
409 1p77_A Shikimate 5-dehydrogena 90.9 0.19 6.5E-06 45.9 4.4 34 27-60 118-151 (272)
410 3c7a_A Octopine dehydrogenase; 90.9 0.12 4.1E-06 50.4 3.1 30 29-58 3-33 (404)
411 1ez4_A Lactate dehydrogenase; 90.8 0.19 6.6E-06 47.0 4.4 36 25-60 2-39 (318)
412 2egg_A AROE, shikimate 5-dehyd 90.8 0.25 8.4E-06 45.8 5.1 34 27-60 140-174 (297)
413 2f1k_A Prephenate dehydrogenas 90.8 0.24 8.2E-06 45.3 5.0 32 29-60 1-32 (279)
414 3vku_A L-LDH, L-lactate dehydr 90.8 0.22 7.6E-06 46.6 4.7 35 26-60 7-43 (326)
415 4a9w_A Monooxygenase; baeyer-v 90.8 0.21 7.2E-06 47.3 4.8 33 27-60 162-194 (357)
416 2rir_A Dipicolinate synthase, 90.8 0.27 9.3E-06 45.6 5.4 34 27-60 156-189 (300)
417 3ktd_A Prephenate dehydrogenas 90.7 0.27 9.1E-06 46.4 5.3 35 27-61 7-41 (341)
418 3c4n_A Uncharacterized protein 90.7 0.11 3.6E-06 50.7 2.6 38 28-65 36-75 (405)
419 1jw9_B Molybdopterin biosynthe 90.7 0.21 7E-06 44.9 4.3 32 28-59 31-63 (249)
420 1yqg_A Pyrroline-5-carboxylate 90.7 0.2 6.9E-06 45.3 4.3 32 29-60 1-33 (263)
421 1oju_A MDH, malate dehydrogena 90.6 0.21 7.1E-06 46.1 4.3 33 29-61 1-35 (294)
422 3d4o_A Dipicolinate synthase s 90.6 0.3 1E-05 45.1 5.4 35 27-61 154-188 (293)
423 1o94_A Tmadh, trimethylamine d 90.6 0.23 7.9E-06 52.4 5.2 37 27-64 527-565 (729)
424 1wdk_A Fatty oxidation complex 90.6 0.2 6.8E-06 52.6 4.6 35 27-61 313-347 (715)
425 2izz_A Pyrroline-5-carboxylate 90.5 0.25 8.5E-06 46.4 4.9 34 28-61 22-59 (322)
426 1edz_A 5,10-methylenetetrahydr 90.5 0.23 7.8E-06 46.1 4.4 34 27-60 176-210 (320)
427 3dhn_A NAD-dependent epimerase 90.3 0.22 7.6E-06 43.8 4.2 36 26-61 2-38 (227)
428 1ldn_A L-lactate dehydrogenase 90.3 0.26 8.9E-06 46.1 4.8 34 27-60 5-40 (316)
429 2gf2_A Hibadh, 3-hydroxyisobut 90.2 0.24 8.1E-06 45.8 4.4 32 30-61 2-33 (296)
430 2ahr_A Putative pyrroline carb 90.2 0.27 9.3E-06 44.4 4.7 33 28-60 3-35 (259)
431 2pgd_A 6-phosphogluconate dehy 90.1 0.26 8.9E-06 49.1 4.9 32 29-60 3-34 (482)
432 3zwc_A Peroxisomal bifunctiona 90.1 0.28 9.6E-06 51.4 5.3 35 27-61 315-349 (742)
433 1w4x_A Phenylacetone monooxyge 90.0 0.24 8.1E-06 50.3 4.6 36 27-62 185-220 (542)
434 2cvz_A Dehydrogenase, 3-hydrox 90.0 0.22 7.5E-06 45.8 4.0 32 29-61 2-33 (289)
435 3q2o_A Phosphoribosylaminoimid 90.0 0.43 1.5E-05 46.1 6.3 35 27-61 13-47 (389)
436 1p3d_A UDP-N-acetylmuramate--a 90.0 0.23 7.9E-06 49.5 4.4 37 25-61 15-52 (475)
437 3nep_X Malate dehydrogenase; h 90.0 0.26 9E-06 45.9 4.4 33 29-61 1-35 (314)
438 1x0v_A GPD-C, GPDH-C, glycerol 89.9 0.16 5.4E-06 48.4 3.1 34 29-62 9-49 (354)
439 2aef_A Calcium-gated potassium 89.9 0.16 5.4E-06 45.2 2.8 34 27-61 8-41 (234)
440 2gag_A Heterotetrameric sarcos 89.9 0.15 5.1E-06 55.7 3.1 37 28-64 284-320 (965)
441 3tri_A Pyrroline-5-carboxylate 89.9 0.36 1.2E-05 44.2 5.3 34 28-61 3-39 (280)
442 3ojo_A CAP5O; rossmann fold, c 89.8 0.24 8.3E-06 48.3 4.2 32 29-60 12-43 (431)
443 1y56_A Hypothetical protein PH 89.6 0.49 1.7E-05 47.3 6.5 54 241-294 258-312 (493)
444 3ond_A Adenosylhomocysteinase; 89.6 0.36 1.2E-05 47.5 5.3 34 27-60 264-297 (488)
445 3gpi_A NAD-dependent epimerase 89.6 0.41 1.4E-05 43.8 5.5 34 28-61 3-36 (286)
446 1yb4_A Tartronic semialdehyde 89.5 0.21 7.3E-06 46.1 3.5 33 28-61 3-35 (295)
447 2hk9_A Shikimate dehydrogenase 89.4 0.29 1E-05 44.7 4.3 33 28-60 129-161 (275)
448 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.3 0.3 1E-05 48.5 4.6 32 29-60 2-33 (478)
449 1leh_A Leucine dehydrogenase; 89.2 0.42 1.4E-05 45.4 5.3 34 27-60 172-205 (364)
450 1gte_A Dihydropyrimidine dehyd 89.1 0.32 1.1E-05 53.5 5.0 34 28-61 332-366 (1025)
451 3fi9_A Malate dehydrogenase; s 89.1 0.42 1.4E-05 45.1 5.1 33 28-60 8-43 (343)
452 1lqt_A FPRA; NADP+ derivative, 89.0 0.33 1.1E-05 48.0 4.7 36 27-62 146-202 (456)
453 1np3_A Ketol-acid reductoisome 89.0 0.42 1.4E-05 45.2 5.2 34 28-61 16-49 (338)
454 3e8x_A Putative NAD-dependent 88.9 0.45 1.5E-05 42.1 5.1 34 28-61 21-55 (236)
455 4hv4_A UDP-N-acetylmuramate--L 88.9 0.28 9.5E-06 49.1 4.0 35 27-61 21-56 (494)
456 3don_A Shikimate dehydrogenase 88.8 0.29 9.9E-06 44.6 3.8 34 27-60 116-150 (277)
457 3d0o_A L-LDH 1, L-lactate dehy 88.8 0.37 1.3E-05 45.0 4.6 33 28-60 6-40 (317)
458 3tnl_A Shikimate dehydrogenase 88.8 0.5 1.7E-05 43.9 5.4 34 27-60 153-187 (315)
459 1i36_A Conserved hypothetical 88.8 0.34 1.2E-05 43.9 4.2 30 30-59 2-31 (264)
460 3u62_A Shikimate dehydrogenase 88.8 0.48 1.6E-05 42.6 5.1 33 27-60 108-141 (253)
461 3d1l_A Putative NADP oxidoredu 88.8 0.3 1E-05 44.3 3.9 33 28-60 10-43 (266)
462 3pwz_A Shikimate dehydrogenase 88.7 0.49 1.7E-05 43.0 5.2 34 27-60 119-153 (272)
463 3r6d_A NAD-dependent epimerase 88.7 0.64 2.2E-05 40.6 5.9 35 27-61 4-40 (221)
464 1nvt_A Shikimate 5'-dehydrogen 88.7 0.37 1.3E-05 44.3 4.5 32 28-60 128-159 (287)
465 3o8q_A Shikimate 5-dehydrogena 88.4 0.52 1.8E-05 43.1 5.2 34 27-60 125-159 (281)
466 3jyo_A Quinate/shikimate dehyd 88.4 0.53 1.8E-05 43.1 5.3 34 27-60 126-160 (283)
467 3ew7_A LMO0794 protein; Q8Y8U8 88.4 0.54 1.8E-05 40.9 5.2 32 29-60 1-33 (221)
468 2dbq_A Glyoxylate reductase; D 88.1 0.6 2E-05 44.0 5.6 35 27-61 149-183 (334)
469 3fbt_A Chorismate mutase and s 88.1 0.48 1.6E-05 43.3 4.7 34 27-60 121-155 (282)
470 2iz1_A 6-phosphogluconate dehy 88.1 0.43 1.5E-05 47.4 4.8 33 28-60 5-37 (474)
471 2zqz_A L-LDH, L-lactate dehydr 88.0 0.49 1.7E-05 44.4 4.8 35 26-60 7-43 (326)
472 1hdo_A Biliverdin IX beta redu 87.9 0.66 2.2E-05 39.8 5.4 33 29-61 4-37 (206)
473 3h8v_A Ubiquitin-like modifier 87.9 0.37 1.3E-05 44.2 3.8 32 28-59 36-68 (292)
474 1a4i_A Methylenetetrahydrofola 87.9 0.53 1.8E-05 43.0 4.8 33 27-59 164-197 (301)
475 2d5c_A AROE, shikimate 5-dehyd 87.9 0.56 1.9E-05 42.5 5.0 31 30-60 118-148 (263)
476 3h2s_A Putative NADH-flavin re 87.8 0.6 2E-05 40.8 5.1 31 30-60 2-33 (224)
477 3gvp_A Adenosylhomocysteinase 87.8 0.59 2E-05 45.1 5.3 34 27-60 219-252 (435)
478 3rui_A Ubiquitin-like modifier 87.8 0.57 1.9E-05 43.9 5.0 33 27-59 33-66 (340)
479 2f00_A UDP-N-acetylmuramate--L 87.7 0.52 1.8E-05 47.1 5.1 37 25-61 16-53 (491)
480 3ce6_A Adenosylhomocysteinase; 87.5 0.65 2.2E-05 46.0 5.6 34 27-60 273-306 (494)
481 4a26_A Putative C-1-tetrahydro 87.4 0.59 2E-05 42.7 4.8 33 27-59 164-197 (300)
482 1gpj_A Glutamyl-tRNA reductase 87.3 0.58 2E-05 45.4 5.1 34 27-60 166-200 (404)
483 3b1f_A Putative prephenate deh 87.3 0.52 1.8E-05 43.3 4.6 33 28-60 6-40 (290)
484 3t4e_A Quinate/shikimate dehyd 87.3 0.73 2.5E-05 42.8 5.5 34 27-60 147-181 (312)
485 1zud_1 Adenylyltransferase THI 87.2 0.53 1.8E-05 42.3 4.4 32 28-59 28-60 (251)
486 4b4o_A Epimerase family protei 87.1 0.77 2.6E-05 42.3 5.7 34 29-62 1-35 (298)
487 1n7h_A GDP-D-mannose-4,6-dehyd 87.1 0.69 2.3E-05 44.4 5.5 34 28-61 28-62 (381)
488 3ngx_A Bifunctional protein fo 87.0 0.6 2.1E-05 42.1 4.6 33 27-59 149-182 (276)
489 2yjz_A Metalloreductase steap4 87.0 0.12 4.1E-06 44.8 0.0 35 27-61 18-52 (201)
490 2gcg_A Glyoxylate reductase/hy 87.0 0.69 2.4E-05 43.4 5.3 35 27-61 154-188 (330)
491 2dvm_A Malic enzyme, 439AA lon 87.0 0.66 2.3E-05 45.1 5.2 32 27-58 185-219 (439)
492 3obb_A Probable 3-hydroxyisobu 86.9 0.56 1.9E-05 43.4 4.5 34 27-60 2-35 (300)
493 1b0a_A Protein (fold bifunctio 86.8 0.66 2.2E-05 42.1 4.7 34 27-60 158-192 (288)
494 1mld_A Malate dehydrogenase; o 86.7 0.54 1.9E-05 43.8 4.4 33 29-61 1-36 (314)
495 1y7t_A Malate dehydrogenase; N 86.6 0.49 1.7E-05 44.5 4.0 35 26-60 2-44 (327)
496 1lu9_A Methylene tetrahydromet 86.6 0.81 2.8E-05 42.0 5.4 34 27-60 118-152 (287)
497 3h9u_A Adenosylhomocysteinase; 86.5 0.75 2.6E-05 44.5 5.3 34 27-60 210-243 (436)
498 3vps_A TUNA, NAD-dependent epi 86.5 0.77 2.6E-05 42.6 5.3 36 27-62 6-42 (321)
499 4id9_A Short-chain dehydrogena 86.4 0.69 2.4E-05 43.6 5.1 37 26-62 17-54 (347)
500 3ba1_A HPPR, hydroxyphenylpyru 86.4 0.79 2.7E-05 43.0 5.3 35 27-61 163-197 (333)
No 1
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=1.8e-45 Score=379.05 Aligned_cols=422 Identities=22% Similarity=0.283 Sum_probs=302.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCC-CcEeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSF-GFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~-g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~ 104 (506)
.+++||+|||||++||+||++|++.|++|+|||+++++||+++|.+.. |+.+|.|++++++. +..+.++++++|++.
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~--~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT--QNRILRLAKELGLET 79 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT--CHHHHHHHHHTTCCE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC--cHHHHHHHHHcCCcc
Confidence 356899999999999999999999999999999999999999998885 99999999999743 567889999999986
Q ss_pred eecCCCCcc-cccchhhhHHHHHHHHhhhccccceeecC-CCCccCHHHHHHHHHHHHHHHHHHHHHhh---------cC
Q 010587 105 YRTSGDNSV-LYDHDLERVLKTVVVSLIQANLCYALFDM-DGNQVPQELVTKVGEAFESILKETDKVRE---------EH 173 (506)
Q Consensus 105 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 173 (506)
......... .+..+. . ..+.. ......+.....+...+..+......+.. ..
T Consensus 80 ~~~~~~~~~~~~~~g~----------------~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (520)
T 1s3e_A 80 YKVNEVERLIHHVKGK----------------S-YPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEE 142 (520)
T ss_dssp EECCCSSEEEEEETTE----------------E-EEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHH
T ss_pred eecccCCceEEEECCE----------------E-EEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhh
Confidence 553322211 111111 0 01111 01101111111111111111111110000 00
Q ss_pred CCCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccccccc------------cCCCccccc
Q 010587 174 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEEL------------LPGGHGLMV 240 (506)
Q Consensus 174 ~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~------------~~~~~~~~~ 240 (506)
..+.++.+++.+... .+.++.++.++ ...++.++.++++..+..... -.+....+.
T Consensus 143 ~~~~s~~~~l~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 211 (520)
T 1s3e_A 143 WDNMTMKELLDKLCW-----------TESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFV 211 (520)
T ss_dssp HHTSBHHHHHHHHCS-----------SHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEET
T ss_pred hhccCHHHHHHhhCC-----------CHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEe
Confidence 235677777764322 12223344443 456677777777654321100 012235789
Q ss_pred cchHHHHHHHhc--cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhc
Q 010587 241 RGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDL 318 (506)
Q Consensus 241 ~G~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 318 (506)
+|++.++++|.+ |++|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+..+ .+.|+||+...+.+.++
T Consensus 212 gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l--~~~p~lp~~~~~~i~~~ 289 (520)
T 1s3e_A 212 GGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKI--HFNPPLPMMRNQMITRV 289 (520)
T ss_dssp TCTHHHHHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGGS--EEESCCCHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcce--eeCCCCCHHHHHHHHhC
Confidence 999999999987 88999999999999988889999999989999999999999987653 46789999999999999
Q ss_pred CCccccEEEEEeCCCCCCCCCcceeec--CC-CCcceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHH
Q 010587 319 GVGIENKIIMHFDKVFWPNVEFLGVVS--DT-SYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLK 395 (506)
Q Consensus 319 ~~~~~~~v~~~~~~~~~~~~~~~g~~~--~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~ 395 (506)
+++...|+++.|++++|++..+.|.+. +. ......+.....+.+..+++.++.+..+..|.+++++++++.++++|.
T Consensus 290 ~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~ 369 (520)
T 1s3e_A 290 PLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYA 369 (520)
T ss_dssp CBCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHH
Confidence 999999999999999998665555432 22 222233333322333477888888877788889999999999999999
Q ss_pred HHCCC--CCCCcEEEecccCCCCCCCcccc-cCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHH
Q 010587 396 KILPD--ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAED 472 (506)
Q Consensus 396 ~~~p~--~~~~~~~~~~~w~~~~~~~g~~~-~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~ 472 (506)
++||. ..+|..+...+|..+++..|+|. +..+++...+.+.+++|++||||||++++..++|+++||+.||.+||++
T Consensus 370 ~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~ 449 (520)
T 1s3e_A 370 KVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAARE 449 (520)
T ss_dssp HHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHH
T ss_pred HHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHH
Confidence 99985 35788899999999999999887 5667776666677899999999999999876779999999999999999
Q ss_pred HHHHHHH
Q 010587 473 CRMRVLE 479 (506)
Q Consensus 473 i~~~l~~ 479 (506)
|++.+..
T Consensus 450 i~~~l~~ 456 (520)
T 1s3e_A 450 ILHAMGK 456 (520)
T ss_dssp HHHHTTS
T ss_pred HHHHHhc
Confidence 9887643
No 2
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=5.3e-44 Score=362.33 Aligned_cols=419 Identities=21% Similarity=0.284 Sum_probs=296.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCeee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLYR 106 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~~ 106 (506)
+++||+|||||++||+||++|++.|++|+|||+++++||++.+....|+.+|.|+++++. ....+.++++++|++...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSP--DQTALISLLDELGLKTFE 81 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCT--TCHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecC--ccHHHHHHHHHcCCcccc
Confidence 358999999999999999999999999999999999999999988889999999999864 245788999999998655
Q ss_pred cCCCCccc-ccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhh---------cCCCC
Q 010587 107 TSGDNSVL-YDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVRE---------EHDED 176 (506)
Q Consensus 107 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 176 (506)
........ +..+.. .+. +......+.+.....+...+..+......... ....+
T Consensus 82 ~~~~~~~~~~~~~g~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (453)
T 2yg5_A 82 RYREGESVYISSAGE---------------RTR-YTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDT 145 (453)
T ss_dssp CCCCSEEEEECTTSC---------------EEE-ECSSSCSCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHS
T ss_pred cccCCCEEEEeCCCc---------------eee-ccCCCCCCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhh
Confidence 43222211 111000 011 11111112222122222212111111111110 01235
Q ss_pred CCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcc-cccccccccccccC-----------CCccccccch
Q 010587 177 MSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAE-TISLKSWDKEELLP-----------GGHGLMVRGY 243 (506)
Q Consensus 177 ~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~s~~~~~~~~~~~-----------~~~~~~~~G~ 243 (506)
.++.+++.+... .+.++.++.++ ...++.++. .+|+..+....... ....++.+|+
T Consensus 146 ~s~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~ 214 (453)
T 2yg5_A 146 VSFKQWLINQSD-----------DAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGM 214 (453)
T ss_dssp SBHHHHHHHHCS-----------CHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCT
T ss_pred ccHHHHHHhhcC-----------CHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCCh
Confidence 677777764321 12233344443 355666666 66655432110000 1235789999
Q ss_pred HHHHHHHhc--cCCeeeCCeeEEEEEcCCc-EEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCC
Q 010587 244 LPVINTLAK--GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGV 320 (506)
Q Consensus 244 ~~l~~~l~~--g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 320 (506)
+.++++|.+ |++|++|++|++|+.++++ +.|++ +|+++.||+||+|+|+..+..+ .+.|+||+...+++.++.+
T Consensus 215 ~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l--~~~p~lp~~~~~~i~~~~~ 291 (453)
T 2yg5_A 215 QQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSRI--SYDPPLPRRQHQMHQHQSL 291 (453)
T ss_dssp HHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGGS--EEESCCCHHHHHHGGGEEE
T ss_pred HHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhcC--EeCCCCCHHHHHHHhcCCC
Confidence 999999976 6799999999999998888 88876 6778999999999999987643 3678999998899999999
Q ss_pred ccccEEEEEeCCCCCCCCCcceeecCCC-CcceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCC
Q 010587 321 GIENKIIMHFDKVFWPNVEFLGVVSDTS-YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP 399 (506)
Q Consensus 321 ~~~~~v~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p 399 (506)
....|+.+.|+.++|++..+.|.+.... .....+.+.....+..+++.++.+..+..|..++++++++.++++|++++|
T Consensus 292 ~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~ 371 (453)
T 2yg5_A 292 GLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLG 371 (453)
T ss_dssp CCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred cceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999997655555543322 223333333222235678888877777788889999999999999999997
Q ss_pred C-CCCCcEEEecccCCCCCCCcccc-cCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHH
Q 010587 400 D-ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 477 (506)
Q Consensus 400 ~-~~~~~~~~~~~w~~~~~~~g~~~-~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l 477 (506)
. ..+|..+...+|..+++..|+|. ...+++.....+.+++|++||||||++++..++|+++||+.||.+||++|++.+
T Consensus 372 ~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 372 PKAEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp GGGGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHh
Confidence 4 45788888999999999998875 445776555566788999999999999987677999999999999999998865
No 3
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=7.5e-42 Score=359.49 Aligned_cols=448 Identities=31% Similarity=0.495 Sum_probs=298.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~ 104 (506)
....+||+|||||++||+||+.|++.|++|+|+|+++++||++.+.+..|+.+|.|++++++. ..+++..+.++++++.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~l~~~l~~~~ 182 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL-GGNPMAVVSKQVNMEL 182 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEETTEEEESSCCEECCS-BTCHHHHHHHHHTCCE
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccccCchhhcCcEEEeCC-CCchHHHHHHHhCcch
Confidence 356799999999999999999999999999999999999999999988999999999998764 3466788899999976
Q ss_pred eecCCCCcccccchhh------hHHHHHHHH------hhhccccceeecCCCCccCH-HHHHHHHHHH-----HHHHHHH
Q 010587 105 YRTSGDNSVLYDHDLE------RVLKTVVVS------LIQANLCYALFDMDGNQVPQ-ELVTKVGEAF-----ESILKET 166 (506)
Q Consensus 105 ~~~~~~~~~~~~~~~~------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~ 166 (506)
........++...+.. ......... .+.....+.... ...... ...+.+.... ..+....
T Consensus 183 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 260 (662)
T 2z3y_A 183 AKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN--NKPVSLGQALEVVIQLQEKHVKDEQIEHW 260 (662)
T ss_dssp EECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEET--TEECBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccceEEeCCCcCCCcchhhhhhHHHHHHHHHHHHHHhcccccccC--CCCCCHHHHHHHHHHhhhhhhhhhhhhhh
Confidence 6543222222111111 000000000 000000000000 111111 1111111111 1111111
Q ss_pred HHH--------------h------hcCCCC------------C----CHHH-------HHHHHHccCchhh---------
Q 010587 167 DKV--------------R------EEHDED------------M----SIQR-------AISIVFDRRPELR--------- 194 (506)
Q Consensus 167 ~~~--------------~------~~~~~~------------~----s~~~-------~~~~~~~~~~~l~--------- 194 (506)
.+. . ...... . ++.. .+..+.......+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 340 (662)
T 2z3y_A 261 KKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQEL 340 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhhHHHHHhhhhhhhhhhhhHHHHHHHh
Confidence 100 0 000000 0 0000 0000000000000
Q ss_pred ---------hhhhHHHHHHHHHHhhhhcccCCcccccccccccc--cccCCCccccccchHHHHHHHhccCCeeeCCeeE
Q 010587 195 ---------LEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVT 263 (506)
Q Consensus 195 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~G~~~l~~~l~~g~~i~~~~~V~ 263 (506)
.......+++++...+....+.....+++..+... ....+....+.+|++.|+++|.++++|++|++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~l~~~La~~l~I~l~~~V~ 420 (662)
T 2z3y_A 341 EANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVR 420 (662)
T ss_dssp TTSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEEETTCTTHHHHHHTTTCEEETTEEEE
T ss_pred hccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceeeecCcHHHHHHHHHhcCceecCCeEE
Confidence 00001122233222222223445555555544321 1233556688999999999999999999999999
Q ss_pred EEEEcCCcEEEEEcC------CcEEEcCEEEEecChhhhhcC--cccccCCCChHHHHHHHhcCCccccEEEEEeCCCCC
Q 010587 264 KITRHYIGVKVTVEG------GKTFVADAVVVAVPLGVLKAR--TIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 335 (506)
Q Consensus 264 ~I~~~~~~v~V~~~~------G~~i~ad~VI~a~~~~~~~~~--~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~ 335 (506)
+|+.++++|+|++.+ |++++||+||+|+|+..+..+ .+.|.|+||+...+++..++++...||++.|+++||
T Consensus 421 ~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW 500 (662)
T 2z3y_A 421 QVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFW 500 (662)
T ss_dssp EEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCS
T ss_pred EEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccc
Confidence 999999999998876 568999999999999998863 367899999999999999999999999999999999
Q ss_pred CCC-CcceeecCCCC---cceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCC--CCCCcEEEe
Q 010587 336 PNV-EFLGVVSDTSY---GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLV 409 (506)
Q Consensus 336 ~~~-~~~g~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~--~~~~~~~~~ 409 (506)
++. ...|.+.+... ....+++.. +..+|+.++.+..+..+..++++++++.++++|.++|+. ..+|..+.+
T Consensus 501 ~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v 577 (662)
T 2z3y_A 501 DPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVV 577 (662)
T ss_dssp CTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEE
T ss_pred cCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEE
Confidence 853 45565433221 112222221 456788888888888899999999999999999999975 457888999
Q ss_pred cccCCCCCCCcccccCCCCCChHHHHHhcCCC-------------CceEeeccccCCcCcchhhHHHHHHHHHHHHHHHH
Q 010587 410 SHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 476 (506)
Q Consensus 410 ~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-------------~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~ 476 (506)
.+|..++++.|+|++..+|+....++.+..|+ ++|||||++++..+.||||||+.||.+||++|++.
T Consensus 578 ~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~ 657 (662)
T 2z3y_A 578 SRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 657 (662)
T ss_dssp CCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888998777667776664 68999999999877899999999999999999887
Q ss_pred HH
Q 010587 477 VL 478 (506)
Q Consensus 477 l~ 478 (506)
+.
T Consensus 658 ~~ 659 (662)
T 2z3y_A 658 FL 659 (662)
T ss_dssp HT
T ss_pred cc
Confidence 64
No 4
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=6.5e-43 Score=358.19 Aligned_cols=409 Identities=21% Similarity=0.277 Sum_probs=289.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCC--Cee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGL--PLY 105 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl--~~~ 105 (506)
++||+|||||++||+||++|+++|++|+|||+++++|||++|...+|+.+|.|++++++ .+..+.++++++|+ +..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~--~~~~~~~~l~~lgl~~~~~ 116 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHW--HQSHVWREITRYKMHNALS 116 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCT--TSHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecC--ccHHHHHHHHHcCCcceee
Confidence 38999999999999999999999999999999999999999999999999999999974 34578999999999 444
Q ss_pred ecC----CCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHH-HHHHHHHHHHHHHH----HHHHHhh-----
Q 010587 106 RTS----GDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQE-LVTKVGEAFESILK----ETDKVRE----- 171 (506)
Q Consensus 106 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~----- 171 (506)
... ....+.+.++. .....++.. ....+...+..+.. .......
T Consensus 117 ~~~~~~~~~~~~~~~~~~----------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (495)
T 2vvm_A 117 PSFNFSRGVNHFQLRTNP----------------------TTSTYMTHEAEDELLRSALHKFTNVDGTNGRTVLPFPHDM 174 (495)
T ss_dssp ESCCCSSSCCEEEEESST----------------------TCCEEECHHHHHHHHHHHHHHHHCSSSSTTTTTCSCTTST
T ss_pred cccccCCCceEEEecCCC----------------------CceeecCHHHHHHHHHHHHHHHHccchhhhhhcCCCCCCc
Confidence 432 11122221100 000112221 11111111111111 0000000
Q ss_pred ------cCCCCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccccccc----------cCC
Q 010587 172 ------EHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEEL----------LPG 234 (506)
Q Consensus 172 ------~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~----------~~~ 234 (506)
...++.++.+++...... +.... +.++.++ ...++.++..+|+..+..... ...
T Consensus 175 ~~~~~~~~~~~~s~~~~l~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 245 (495)
T 2vvm_A 175 FYVPEFRKYDEMSYSERIDQIRDE--------LSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCL 245 (495)
T ss_dssp TSSTTHHHHHTSBHHHHHHHHGGG--------CCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHH
T ss_pred ccCcchhhhhhhhHHHHHHHhhcc--------CCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhh
Confidence 011245777776543110 11222 2233333 445566677776654321100 012
Q ss_pred CccccccchHHHHHHHhc-----c-CCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCC
Q 010587 235 GHGLMVRGYLPVINTLAK-----G-LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLP 308 (506)
Q Consensus 235 ~~~~~~~G~~~l~~~l~~-----g-~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp 308 (506)
..+.+.+|++.++++|.+ | ++|+++++|++|+.+++++.|++.+|++++||+||+|+|+..+..+ .|.|+||
T Consensus 246 ~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i--~~~p~lp 323 (495)
T 2vvm_A 246 MSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTI--QFSPALS 323 (495)
T ss_dssp HSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGGS--EEESCCC
T ss_pred ceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhhe--eeCCCCC
Confidence 344678999999988864 4 6799999999999988889999999988999999999999988753 4779999
Q ss_pred hHHHHHHHhcCCccccEEEEEeCCCCCCCCCcceeecCCCCcceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHH
Q 010587 309 DWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAAN 388 (506)
Q Consensus 309 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~ 388 (506)
+...+++..+.+....|+++.|++++|. .+.|...+.......+.+...+.+..+++.+.... . .+++++..+
T Consensus 324 ~~~~~ai~~~~~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~-~----~~~~~e~~~ 396 (495)
T 2vvm_A 324 TERISAMQAGHVSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNSA-N----HIQPDEDVR 396 (495)
T ss_dssp HHHHHHHHHCCCCCCEEEEEEESCGGGG--GEEEEECSSCSSCEEEEEEECTTSCEEEEEEECST-T----CCCTTTCHH
T ss_pred HHHHHHHHhcCCCceeEEEEEECCccCC--CceeEecCCCCcEEEecCCCCCCCCeEEEEEeCcc-c----cCCCHHHHH
Confidence 9999999999999999999999999884 45565543333334444444455667777765322 1 144556778
Q ss_pred HHHHHHHHHCCCCCCCcEEEecccCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHH
Q 010587 389 FAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLM 468 (506)
Q Consensus 389 ~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~ 468 (506)
.++++|++++|...+|..+..++|..++++.|+|....+++....++.+++|.+||||||++++..++|+||||+.||.+
T Consensus 397 ~~~~~L~~~~~~~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~r 476 (495)
T 2vvm_A 397 ETLKAVGQLAPGTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTR 476 (495)
T ss_dssp HHHHHHHTTSTTSCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHH
Confidence 89999999998766788888999999999999998878888767788899999999999999987677999999999999
Q ss_pred HHHHHHHHHH
Q 010587 469 AAEDCRMRVL 478 (506)
Q Consensus 469 aA~~i~~~l~ 478 (506)
||++|++.+.
T Consensus 477 aA~~i~~~l~ 486 (495)
T 2vvm_A 477 AARVVLEELG 486 (495)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999988774
No 5
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=1.5e-41 Score=360.67 Aligned_cols=448 Identities=32% Similarity=0.500 Sum_probs=296.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~ 105 (506)
...++|+|||||++||+||+.|++.|++|+|||+++++||++.+.+..|+.+|.|++++++. ..+++..+.++++++..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~l~~~lg~~~~ 354 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL-GGNPMAVVSKQVNMELA 354 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEETTEEEESSCCEECCS-BTCHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecccccchhcCceEecCC-CCchHHHHHHHhCCchh
Confidence 45789999999999999999999999999999999999999999988999999999998764 34677888999999765
Q ss_pred ecCCCCcccccchhh------hHHHHHHH------HhhhccccceeecCCCCccCHH-HHHHHHHHH-----HHHHHHHH
Q 010587 106 RTSGDNSVLYDHDLE------RVLKTVVV------SLIQANLCYALFDMDGNQVPQE-LVTKVGEAF-----ESILKETD 167 (506)
Q Consensus 106 ~~~~~~~~~~~~~~~------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~ 167 (506)
.......++...+.. ......+. ..+.....+... ........ ..+.+.... ..++..+.
T Consensus 355 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~--~~~~~slg~~~e~v~~~~er~~~~e~l~~~~ 432 (852)
T 2xag_A 355 KIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVL--NNKPVSLGQALEVVIQLQEKHVKDEQIEHWK 432 (852)
T ss_dssp ECCCCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCEE--TTEECBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccceEEecCCccccchhhhhhhhhhhhhHHHHHHHhhhhhhhcc--cCCCccHHHHHHHhhhhhhhhcchhHHHHhh
Confidence 543222222111110 00000000 000000001001 11111111 111111100 11111111
Q ss_pred HHh---hc---CCC-----CCCHHHHHHH----------------------------HHccCchhhh-------------
Q 010587 168 KVR---EE---HDE-----DMSIQRAISI----------------------------VFDRRPELRL------------- 195 (506)
Q Consensus 168 ~~~---~~---~~~-----~~s~~~~~~~----------------------------~~~~~~~l~~------------- 195 (506)
+.. .. ... ...+.++... .+.....+..
T Consensus 433 ~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~~e~s~rs~~~~l~~~~~~~~~l~~~~~~l~~~l~~l~ 512 (852)
T 2xag_A 433 KIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELE 512 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred hhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccchhhhhhhhhhhhHHHHHHHHhhhhhhhhhHHHHHHhhh
Confidence 000 00 000 0000000000 0000000000
Q ss_pred ---------hhhHHHHHHHHHHhhhhcccCCcccccccccccc--cccCCCccccccchHHHHHHHhccCCeeeCCeeEE
Q 010587 196 ---------EGLAHKVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTK 264 (506)
Q Consensus 196 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~G~~~l~~~l~~g~~i~~~~~V~~ 264 (506)
......++++++..+....+.....+++..+... ....+....+.+|++.|+++|.++++|++|++|++
T Consensus 513 ~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~Lnt~V~~ 592 (852)
T 2xag_A 513 ANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQ 592 (852)
T ss_dssp HSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGGCCBSCCEEETTCTTHHHHHHTTTCCEECSEEEEE
T ss_pred ccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhccccccCCceEEecCcHHHHHHHHHhCCCEEeCCeEEE
Confidence 0000112222222222222334444554433321 12344566889999999999999999999999999
Q ss_pred EEEcCCcEEEEEcC------CcEEEcCEEEEecChhhhhcC--cccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCC
Q 010587 265 ITRHYIGVKVTVEG------GKTFVADAVVVAVPLGVLKAR--TIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 336 (506)
Q Consensus 265 I~~~~~~v~V~~~~------G~~i~ad~VI~a~~~~~~~~~--~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 336 (506)
|+.++++|+|++.+ |++++||+||+|+|+..+..+ .+.|.|+||+...+++..+.++...||++.|+++||+
T Consensus 593 I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~ 672 (852)
T 2xag_A 593 VRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 672 (852)
T ss_dssp EEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred EEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccC
Confidence 99999999988765 568999999999999998863 3678999999999999999999999999999999998
Q ss_pred C-CCcceeecCCC---CcceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCC--CCCCcEEEec
Q 010587 337 N-VEFLGVVSDTS---YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVS 410 (506)
Q Consensus 337 ~-~~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~--~~~~~~~~~~ 410 (506)
+ ...+|.+.... ....++++.. +..+|+.++.+..+..+..++++++++.++++|.++|+. ..+|..+.+.
T Consensus 673 ~~~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vt 749 (852)
T 2xag_A 673 PSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVS 749 (852)
T ss_dssp TTCCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEEC
T ss_pred CCCCeeeeeccccCCCCceEEEecCC---CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEE
Confidence 5 34566543321 1122232322 345778888888888888999999999999999999975 3478899999
Q ss_pred ccCCCCCCCcccccCCCCCChHHHHHhcCCC-------------CceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHH
Q 010587 411 HWGTDANSLGSYSYDTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 477 (506)
Q Consensus 411 ~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-------------~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l 477 (506)
+|..++++.|+|.+..+|+....++.+..|+ ++|||||++++..+.|||+||+.||.+||++|++.+
T Consensus 750 rW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l 829 (852)
T 2xag_A 750 RWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 829 (852)
T ss_dssp CTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888998776667766654 689999999998778999999999999999999988
Q ss_pred HH
Q 010587 478 LE 479 (506)
Q Consensus 478 ~~ 479 (506)
..
T Consensus 830 ~~ 831 (852)
T 2xag_A 830 LG 831 (852)
T ss_dssp HC
T ss_pred hC
Confidence 64
No 6
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=7.1e-42 Score=361.27 Aligned_cols=421 Identities=31% Similarity=0.541 Sum_probs=305.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecC-CCcEeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYS-FGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~ 105 (506)
+.+||+|||||++||+||+.|++.|++|+|+|+++++||++.|... .|..+|.|++++++. ..+++..+++++|++..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~-~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGC-INNPVALMCEQLGISMH 413 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECC-TTCHHHHHHHHHTCCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCC-ccChHHHHHHHhCCccc
Confidence 4689999999999999999999999999999999999999988654 588999999999864 45678889999999865
Q ss_pred ecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhh--cCCCCCCHHHHH
Q 010587 106 RTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVRE--EHDEDMSIQRAI 183 (506)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~ 183 (506)
.......+.. ..+..............+..+......... ....+.++.+.+
T Consensus 414 ~~~~~~~l~~--------------------------~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~d~sl~~~~ 467 (776)
T 4gut_A 414 KFGERCDLIQ--------------------------EGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKI 467 (776)
T ss_dssp ECCSCCCEEC--------------------------TTSCBCCHHHHHHHHHHHHHHHHHHHHHGGGCCGGGCCBHHHHH
T ss_pred ccccccceEc--------------------------cCCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHH
Confidence 5433222211 111112222222222233333333333222 112234444443
Q ss_pred HHHH----ccCchhhhhhhHHHHHHHHHHhhhhcccCCccccccccccccc---ccCCCccccccchHHHHHHHhccCCe
Q 010587 184 SIVF----DRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEE---LLPGGHGLMVRGYLPVINTLAKGLDI 256 (506)
Q Consensus 184 ~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~---~~~~~~~~~~~G~~~l~~~l~~g~~i 256 (506)
...+ .... +.........+......+....+..+..++...+.... ...+....+.+|++.++++|.+|++|
T Consensus 468 ~~~~~~~l~~~g-v~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~gl~I 546 (776)
T 4gut_A 468 EEIYKAFIKESG-IQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDI 546 (776)
T ss_dssp HHHHHHHHHHSC-CCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHHHTTSCE
T ss_pred HHHHHHHHHhcC-CCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHHHhCCcE
Confidence 3211 1100 00001111222222222233344455555554433211 12344556889999999999999999
Q ss_pred eeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCC
Q 010587 257 RLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 336 (506)
Q Consensus 257 ~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 336 (506)
+++++|++|+.++++|+|++.+|++++||+||+|+|+..+....+.|.|+||+...+++..+.++...|+.+.|+++||+
T Consensus 547 ~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~ 626 (776)
T 4gut_A 547 QLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWD 626 (776)
T ss_dssp ESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTH
T ss_pred EcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCccccc
Confidence 99999999999999999999999899999999999999987667789999999999999999999999999999999997
Q ss_pred CC----CcceeecCCC---CcceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCC--CCCCcEE
Q 010587 337 NV----EFLGVVSDTS---YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQY 407 (506)
Q Consensus 337 ~~----~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~--~~~~~~~ 407 (506)
+. .+.|.+.... .....+.+..+..+..+|+.++.+..+..+..++++++++.++++|.++|+. ...|..+
T Consensus 627 ~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~ 706 (776)
T 4gut_A 627 SKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKY 706 (776)
T ss_dssp HHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEE
T ss_pred ccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceE
Confidence 42 3445443321 1122233333334467888899888888899999999999999999999974 4578889
Q ss_pred EecccCCCCCCCcccccCCCCCChHHHHHhcCCC-CceEeeccccCCcCcchhhHHHHHHHHHHHHHHH
Q 010587 408 LVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 475 (506)
Q Consensus 408 ~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~ 475 (506)
.+.+|..+++..|+|.+..++.....++.+..|+ ++|+|||++++..++|+||||+.||.++|++|+.
T Consensus 707 ~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 707 FVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp EECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred EEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999877888777778888886 8999999999988889999999999999999874
No 7
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=2.2e-42 Score=355.40 Aligned_cols=422 Identities=28% Similarity=0.411 Sum_probs=280.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeCCCCCeeEEeecC-CCcEeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGGRVHTDYS-FGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~ 104 (506)
+.+||+|||||++||+||++|+++| ++|+|||+++++|||+.|... +|+.+|.|++++++. ..+++.+++.++++..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~-~~~~~~~~~~~lg~~~ 85 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDT-LTNPLFLEEAQLSLND 85 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCT-TTCHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecC-CCChHHHHHHHhCCCC
Confidence 3579999999999999999999999 999999999999999999876 799999999999753 2456778888877631
Q ss_pred ----eecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccC---HHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 010587 105 ----YRTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVP---QELVTKVGEAFESILKETDKVREEHDEDM 177 (506)
Q Consensus 105 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (506)
..........+..+ ..... ......+.+.+..+...... .....++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~ 139 (516)
T 1rsg_A 86 GRTRFVFDDDNFIYIDEE-------------------------RGRVDHDKELLLEIVDNEMSKFAELEFH-QHLGVSDC 139 (516)
T ss_dssp CCCCEECCCCCCEEEETT-------------------------TEECTTCTTTCHHHHHHHHHHHHHHHC--------CC
T ss_pred cceeEEECCCCEEEEcCC-------------------------CccccccHHHHHHHHHHHHHHHHHHHhh-hccCCCCC
Confidence 11111111111111 00000 00011111112222111100 11123567
Q ss_pred CHHHHHHHHHccC-chhhhhhhHHHHHHHHHHhhhhcccCCcccccccccccccccCCCccccccchHHHHHHHhccC--
Q 010587 178 SIQRAISIVFDRR-PELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGL-- 254 (506)
Q Consensus 178 s~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~g~-- 254 (506)
++.+++..++... ..+.. ........+...+..+++.++..++...+... ..+...++.+ ++.++++|.+.+
T Consensus 140 s~~~~l~~~l~~~~~~l~~--~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~--~~~~~~~~~g-~~~l~~~l~~~l~~ 214 (516)
T 1rsg_A 140 SFFQLVMKYLLQRRQFLTN--DQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG--HQGRNAFALN-YDSVVQRIAQSFPQ 214 (516)
T ss_dssp BHHHHHHHHHHHHGGGSCH--HHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC--CSSCCEEESC-HHHHHHHHHTTSCG
T ss_pred CHHHHHHHHHHHhhcccCH--HHHHHHHHHHHHHHHHhCCChHHCChHHHHhh--ccCcchhhhC-HHHHHHHHHHhCCC
Confidence 8888877654421 11100 01112222222223344555555554433211 1222234555 999999998754
Q ss_pred -CeeeCCeeEEEEEc-CCcEEEEEcCCcEEEcCEEEEecChhhhhcC---------cccccCCCChHHHHHHHhcCCccc
Q 010587 255 -DIRLGHRVTKITRH-YIGVKVTVEGGKTFVADAVVVAVPLGVLKAR---------TIKFEPRLPDWKEAAIDDLGVGIE 323 (506)
Q Consensus 255 -~i~~~~~V~~I~~~-~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~---------~~~~~~~lp~~~~~~~~~~~~~~~ 323 (506)
+|++|++|++|+.+ +++|.|++.+|++++||+||+|+|+..+... .+.|.|+||+...+++.++.++..
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~ 294 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGAL 294 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCC
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcc
Confidence 69999999999986 5679999999988999999999999988643 368889999999999999999999
Q ss_pred cEEEEEeCCCCCCCC-C-cceeecCCCC-----------------------------cc----eeeeccccCCCceEEEE
Q 010587 324 NKIIMHFDKVFWPNV-E-FLGVVSDTSY-----------------------------GC----SYFLNLHKATGHCVLVY 368 (506)
Q Consensus 324 ~~v~~~~~~~~~~~~-~-~~g~~~~~~~-----------------------------~~----~~~~~~~~~~~~~~l~~ 368 (506)
.|+++.|+++||++. . +.+....+.. .+ .++.+.....+..+|+.
T Consensus 295 ~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 374 (516)
T 1rsg_A 295 GKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMM 374 (516)
T ss_dssp EEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSEEEE
T ss_pred eEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcEEEE
Confidence 999999999999864 2 2221111100 00 01112223446678888
Q ss_pred EeccchhHHhhcC--CHHHHHHH---HHHHHHHHCC------CCC---------CCc--EEEecccCCCCCCCcccccCC
Q 010587 369 MPAGQLARDIEKM--SDEAAANF---AFTQLKKILP------DAS---------SPI--QYLVSHWGTDANSLGSYSYDT 426 (506)
Q Consensus 369 ~~~~~~~~~~~~~--~~~e~~~~---~~~~L~~~~p------~~~---------~~~--~~~~~~w~~~~~~~g~~~~~~ 426 (506)
++.+..+..++.+ +++++.+. ++++|.++|+ ++. .|+ .+...+|..+|++.|+|++..
T Consensus 375 ~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~ 454 (516)
T 1rsg_A 375 LMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACF 454 (516)
T ss_dssp EECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCB
T ss_pred EecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcC
Confidence 9999888888887 88887654 6666666664 322 144 778899999999999999877
Q ss_pred CCCCh-HHHHHhc-CCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHHHHH
Q 010587 427 VGKSH-DLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 480 (506)
Q Consensus 427 ~~~~~-~~~~~~~-~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~~ 480 (506)
+|+.. ...+.++ .|.++|||||++++..+.|||+||+.||.+||++|++.+..+
T Consensus 455 ~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 455 PGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp C----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 88743 3455554 577899999999998778999999999999999999988764
No 8
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=1e-40 Score=339.38 Aligned_cols=424 Identities=30% Similarity=0.461 Sum_probs=289.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCC--CCCCchHHHHHh-cCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGV--CQENPLAPVISR-LGL 102 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~--~~~~~~~~l~~~-lgl 102 (506)
+.+||+|||||++||+||+.|++.|. +|+|+|+++++||++.+....|+.+|.|++++++. ...+++.+++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 56899999999999999999999998 89999999999999999988999999999999843 234678999999 999
Q ss_pred CeeecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHh----hcCCCCCC
Q 010587 103 PLYRTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVR----EEHDEDMS 178 (506)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s 178 (506)
+.......... ...+...+...+.............+........ ....++++
T Consensus 83 ~~~~~~~~~~~-----------------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 139 (472)
T 1b37_A 83 RNFRSDFDYLA-----------------------QNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMS 139 (472)
T ss_dssp CEEECCCTTGG-----------------------GCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCCB
T ss_pred ceeeccCcccc-----------------------ceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhh
Confidence 86543211110 0011111122222211111111111111111111 12234556
Q ss_pred HHH--HHHHHHccCchhhhhhhHHHHHHHHHHhhhhcccCCcccccccccccccc---cCCCcc--ccccchHHHHHHHh
Q 010587 179 IQR--AISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEEL---LPGGHG--LMVRGYLPVINTLA 251 (506)
Q Consensus 179 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~---~~~~~~--~~~~G~~~l~~~l~ 251 (506)
... ++........ ....+.+++.+... ..++.+....++..+..... ..+... ...+|++.++++|.
T Consensus 140 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~ 213 (472)
T 1b37_A 140 ILAMQRLNEHQPNGP----ATPVDMVVDYYKFD--YEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLA 213 (472)
T ss_dssp HHHHHHHHHTSSSSC----CSHHHHHHHHHHTH--HHHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHH
T ss_pred HHHHHHHhhhccccc----ccHHHHHHHHHHHh--hhhcccccccchhhccccccccccCCceeeeecCCcHHHHHHHHH
Confidence 543 2221110000 00011222222211 11233444444432221100 011111 23689999999886
Q ss_pred c-------------cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhc
Q 010587 252 K-------------GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDL 318 (506)
Q Consensus 252 ~-------------g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 318 (506)
+ |++|+++++|++|+.++++++|++.+|++++||+||+|+|+..+..+++.|.|+||+...+++..+
T Consensus 214 ~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~ 293 (472)
T 1b37_A 214 GQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQF 293 (472)
T ss_dssp HTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHS
T ss_pred HhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhc
Confidence 4 358999999999999999999999999899999999999999998777788999999999999999
Q ss_pred CCccccEEEEEeCCCCCCCCCcceeec-CC-C-Ccceeeecc-ccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHH
Q 010587 319 GVGIENKIIMHFDKVFWPNVEFLGVVS-DT-S-YGCSYFLNL-HKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQL 394 (506)
Q Consensus 319 ~~~~~~~v~~~~~~~~~~~~~~~g~~~-~~-~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L 394 (506)
.+....|+++.|+.++|++....+.+. .+ . .....+... ...++..+++.++.+..+..+..++++++.+.++++|
T Consensus 294 ~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L 373 (472)
T 1b37_A 294 DMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVL 373 (472)
T ss_dssp EEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999998632112211 11 1 111122111 1123556666666655566688889999999999999
Q ss_pred HHHCCC--CCCCcEEEecccCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHH
Q 010587 395 KKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAED 472 (506)
Q Consensus 395 ~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~ 472 (506)
.+++|+ ..+++.+.+.+|..+++..|+|....+|+....++.+++|++||||||++++..++|+|+||+.||.+||++
T Consensus 374 ~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~ 453 (472)
T 1b37_A 374 RKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEI 453 (472)
T ss_dssp HHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHH
Confidence 999976 457788888999999999999987778887777888999999999999999986679999999999999999
Q ss_pred HHHHHHH
Q 010587 473 CRMRVLE 479 (506)
Q Consensus 473 i~~~l~~ 479 (506)
|++.+..
T Consensus 454 i~~~l~~ 460 (472)
T 1b37_A 454 LINCAQK 460 (472)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998876
No 9
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=5.5e-40 Score=330.71 Aligned_cols=400 Identities=22% Similarity=0.285 Sum_probs=277.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCC---CcEeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSF---GFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~---g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~ 104 (506)
++||+|||||++||+||++|+++|++|+|||+++++||++.+.... |..+|.|+++++.. .+..+.++++++|++.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~-~~~~~~~~~~~~g~~~ 79 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRK-HHPRLAAELDRYGIPT 79 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTT-TCHHHHHHHHHHTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCC-CcHHHHHHHHHhCCee
Confidence 3799999999999999999999999999999999999999887666 99999999988632 1456788899999986
Q ss_pred eecCCCCcccc-cchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhh---------cCC
Q 010587 105 YRTSGDNSVLY-DHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVRE---------EHD 174 (506)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 174 (506)
..........+ ..+.. + ... .+.+......+...+..+.....++.. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~----------------~--~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 139 (431)
T 3k7m_X 80 AAASEFTSFRHRLGPTA----------------V--DQA--FPIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDL 139 (431)
T ss_dssp EECCCCCEECCBSCTTC----------------C--SSS--SCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGG
T ss_pred eecCCCCcEEEEecCCe----------------e--cCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhh
Confidence 65443332222 11000 0 000 012222333333344444443332211 111
Q ss_pred CCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhhhhcccCCcccccccccccccc---------cCCCccccccchHH
Q 010587 175 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEEL---------LPGGHGLMVRGYLP 245 (506)
Q Consensus 175 ~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~---------~~~~~~~~~~G~~~ 245 (506)
+ .++.+++..... .......+.......++.++..++...+..... +......+.+|+..
T Consensus 140 d-~s~~~~l~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (431)
T 3k7m_X 140 D-IPLNEYVDKLDL----------PPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSAD 208 (431)
T ss_dssp C-SBHHHHHHHHTC----------CHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHH
T ss_pred c-CCHHHHHHhcCC----------CHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHH
Confidence 2 667776653211 111111111112334555555555433221100 11111157899999
Q ss_pred HHHHHhc--cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccc
Q 010587 246 VINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIE 323 (506)
Q Consensus 246 l~~~l~~--g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 323 (506)
+++.+.+ | +|++|++|++|+.++++++|++.+|++++||+||+|+|+..+.. +.+.|++|+...+++..+.+...
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~ 285 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQG 285 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCE
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcce
Confidence 9999875 5 99999999999998889999999998899999999999998874 46789999999999999998888
Q ss_pred cEEEEEeCCCCCCCCCcceeecCCCCcceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCC
Q 010587 324 NKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASS 403 (506)
Q Consensus 324 ~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~ 403 (506)
.|+.+.|+.+++ ++.+ ..+......+.......+..+++.+..+.. +...+.+ .+.+.|++++|+..
T Consensus 286 ~kv~~~~~~~~~---~i~~--~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~---~~~~~~~----~~~~~l~~~~~~~~- 352 (431)
T 3k7m_X 286 LKILIHVRGAEA---GIEC--VGDGIFPTLYDYCEVSESERLLVAFTDSGS---FDPTDIG----AVKDAVLYYLPEVE- 352 (431)
T ss_dssp EEEEEEEESCCT---TEEE--EBSSSSSEEEEEEECSSSEEEEEEEEETTT---CCTTCHH----HHHHHHHHHCTTCE-
T ss_pred EEEEEEECCCCc---CceE--cCCCCEEEEEeCcCCCCCCeEEEEEecccc---CCCCCHH----HHHHHHHHhcCCCC-
Confidence 999999998874 2333 112222223333222255677777766554 2222332 45677888898765
Q ss_pred CcEEEecccCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHH
Q 010587 404 PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 475 (506)
Q Consensus 404 ~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~ 475 (506)
+..+..++|..+++..|+|++..+++....++.+++|.++|||||++++..+.||||||+.||.+||++|+.
T Consensus 353 ~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 353 VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILH 424 (431)
T ss_dssp EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHh
Confidence 778888999999999999998889998888899999999999999999988889999999999999999985
No 10
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=8.5e-40 Score=335.31 Aligned_cols=432 Identities=20% Similarity=0.271 Sum_probs=284.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeec--CCCcEeecCCceeeCCCCCCchHHHHHhcCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDY--SFGFPVDLGASWLHGVCQENPLAPVISRLGLP 103 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~--~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~ 103 (506)
..++||+|||||++||+||+.|++.|++|+|||+++++||++.+.. ..|+.+|.|+++++. ....+.++++++|++
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~g~~ 108 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPE--KHRIVREYIRKFDLR 108 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEET--TCHHHHHHHHHTTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccc--hHHHHHHHHHHhCCC
Confidence 4578999999999999999999999999999999999999998876 568899999999863 345688999999998
Q ss_pred eeecCC--CCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHH----hhcCCCCC
Q 010587 104 LYRTSG--DNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKV----REEHDEDM 177 (506)
Q Consensus 104 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 177 (506)
...... .....+..+........ .. ......+.+........ ..+.+...+..+...+... .....+++
T Consensus 109 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (498)
T 2iid_A 109 LNEFSQENDNAWYFIKNIRKKVGEV-KK-DPGLLKYPVKPSEAGKS---AGQLYEESLGKVVEELKRTNCSYILNKYDTY 183 (498)
T ss_dssp EEEECSCCTTSEEEETTEEEEHHHH-HH-CGGGGCCCCCGGGTTCC---HHHHHHHHTHHHHHHHHHSCHHHHHHHHTTS
T ss_pred ceeecccCCccEEEeCCeeeccccc-cc-CccccccCCCccccCCC---HHHHHHHHHHHHHHHHhhccHHHHHHHhhhh
Confidence 643321 11111111110000000 00 00000010000000000 0111111111111111110 01112346
Q ss_pred CHHHHHHHHHccCchhhhhhhHHHHHHHHHHhhhh---cccCCcccccccccccccccCCCccccccchHHHHHHHhccC
Q 010587 178 SIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEG---WFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGL 254 (506)
Q Consensus 178 s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~g~ 254 (506)
++.+++.... .+....++.+...+.. ++......+. .. ...........+.+|++.++++|.+.+
T Consensus 184 s~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~gG~~~l~~~l~~~l 251 (498)
T 2iid_A 184 STKEYLIKEG---------DLSPGAVDMIGDLLNEDSGYYVSFIESLK--HD-DIFAYEKRFDEIVDGMDKLPTAMYRDI 251 (498)
T ss_dssp BHHHHHHHTS---------CCCHHHHHHHHHHTTCGGGTTSBHHHHHH--HH-HHHTTCCCEEEETTCTTHHHHHHHHHT
T ss_pred hHHHHHHHcc---------CCCHHHHHHHHHhcCcccchhHHHHHHHH--HH-hccccCcceEEeCCcHHHHHHHHHHhc
Confidence 6777664311 0111222211111100 0000000000 00 000112234578999999999998755
Q ss_pred --CeeeCCeeEEEEEcCCcEEEEEcCCc----EEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccccEEEE
Q 010587 255 --DIRLGHRVTKITRHYIGVKVTVEGGK----TFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIM 328 (506)
Q Consensus 255 --~i~~~~~V~~I~~~~~~v~V~~~~G~----~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~ 328 (506)
+|++|++|++|+.++++|.|++.+|+ +++||+||+|+|+..+. .+.|.|+||+...+++..++++...|+++
T Consensus 252 ~~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l 329 (498)
T 2iid_A 252 QDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVHYRSGTKIFL 329 (498)
T ss_dssp GGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEE
T ss_pred ccccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHHHHHHhCCCcceeEEEE
Confidence 89999999999999889999888775 58999999999998765 34678999999999999999999999999
Q ss_pred EeCCCCCCCCCcceee-cCC-CCcceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCC---
Q 010587 329 HFDKVFWPNVEFLGVV-SDT-SYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASS--- 403 (506)
Q Consensus 329 ~~~~~~~~~~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~--- 403 (506)
.|++++|++.++.|.. ... .....++.+...+.+..+|+.++.+..+..+..++++++++.++++|.++++....
T Consensus 330 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~ 409 (498)
T 2iid_A 330 TCTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQ 409 (498)
T ss_dssp EESSCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred EeCCCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhh
Confidence 9999999765433322 111 11222333333355677888888877777788899999999999999999973211
Q ss_pred --CcEEEecccCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHHHH
Q 010587 404 --PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 479 (506)
Q Consensus 404 --~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~ 479 (506)
.....+.+|..+++..|+|.+..+++...+.+.+++|.+||||||++++..+ |+|+||+.||.+||++|++.+..
T Consensus 410 ~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~-g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 410 SFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH-GWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp HHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS-SCHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC-cCHHHHHHHHHHHHHHHHHHhcC
Confidence 1235678999999999999877788777778888999999999999998654 89999999999999999998853
No 11
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-39 Score=331.49 Aligned_cols=408 Identities=18% Similarity=0.246 Sum_probs=277.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC------CcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhc
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS------FKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRL 100 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G------~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~l 100 (506)
+++||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++.. .+..+.++++++
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~--~~~~~~~l~~~l 81 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLE--RKKSAPQLVKDL 81 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEET--TCTHHHHHHHHT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhh--CCHHHHHHHHHc
Confidence 3589999999999999999999999 99999999999999999999999999999998874 356789999999
Q ss_pred CCCeeecC--CCCcccccchhhhHHHHHHHHhhhccccceeecC-CCCccCHHHHHHHH-------HHHHHHHHHHHHHh
Q 010587 101 GLPLYRTS--GDNSVLYDHDLERVLKTVVVSLIQANLCYALFDM-DGNQVPQELVTKVG-------EAFESILKETDKVR 170 (506)
Q Consensus 101 gl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 170 (506)
|++..... ....+.+..+.. ..+.. .....|........ ..+........ ..
T Consensus 82 gl~~~~~~~~~~~~~~~~~g~~-----------------~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 143 (470)
T 3i6d_A 82 GLEHLLVNNATGQSYVLVNRTL-----------------HPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFIL-PA 143 (470)
T ss_dssp TCCTTEEECCCCCEEEECSSCE-----------------EECCC---------------------CCSHHHHHHHHS-CC
T ss_pred CCcceeecCCCCccEEEECCEE-----------------EECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCccc-CC
Confidence 99743221 111222221110 00000 00000000000000 00011111111 11
Q ss_pred hcCCCCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCccccccccccccc---------cc--------
Q 010587 171 EEHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEE---------LL-------- 232 (506)
Q Consensus 171 ~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~---------~~-------- 232 (506)
....++.++.+++... +..+..+.++.++ .+.++.++..+++....... ..
T Consensus 144 ~~~~~~~s~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (470)
T 3i6d_A 144 SKTKDDQSLGEFFRRR-----------VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRP 212 (470)
T ss_dssp CSSSSCCBHHHHHHHH-----------SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------
T ss_pred CCCCCCcCHHHHHHHh-----------cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhcc
Confidence 2334577888887642 4445555555554 56777777777754322110 00
Q ss_pred -----------CCCccccccchHHHHHHHhccC---CeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhc
Q 010587 233 -----------PGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKA 298 (506)
Q Consensus 233 -----------~~~~~~~~~G~~~l~~~l~~g~---~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~ 298 (506)
.+....+.+|++.+++.|.+.+ +|+++++|++|+.+++++.|++.+|++++||+||+|+|+..+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~ 292 (470)
T 3i6d_A 213 QGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAG 292 (470)
T ss_dssp --------------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHH
T ss_pred ccccccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHH
Confidence 1234568899999999998866 79999999999999889999999998899999999999998776
Q ss_pred CcccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCC-CcceeecCCCCc-c---eee----eccccCCCceEEEEE
Q 010587 299 RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVSDTSYG-C---SYF----LNLHKATGHCVLVYM 369 (506)
Q Consensus 299 ~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~g~~~~~~~~-~---~~~----~~~~~~~~~~~l~~~ 369 (506)
++.. ++ ..+.+..+++.+..++.+.|++++|+.. ...|.+.+.... . ..+ .+...+.+..+++++
T Consensus 293 l~~~--~~----~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~ 366 (470)
T 3i6d_A 293 MLSE--LP----AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAY 366 (470)
T ss_dssp HTTT--ST----THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEE
T ss_pred HcCC--ch----hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEE
Confidence 4322 22 2567888999999999999999999653 344555443221 0 111 122335567778887
Q ss_pred eccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCCCcEEEecccCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeecc
Q 010587 370 PAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGE 449 (506)
Q Consensus 370 ~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~ 449 (506)
+.+..+..+..++++++++.++++|.+++|...+|....+++|.. +++.|.....+......+.+.++.+||++||+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~---a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~ 443 (470)
T 3i6d_A 367 VGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHE---SMPQYHVGHKQRIKELREALASAYPGVYMTGA 443 (470)
T ss_dssp ECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEE---EEEECBTTHHHHHHHHHHHHHHHSTTEEECST
T ss_pred ECCCCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCC---ccCCCCCCHHHHHHHHHHHHHhhCCCEEEEee
Confidence 776666778889999999999999999998777788888999964 23333311111223345556677899999999
Q ss_pred ccCCcCcchhhHHHHHHHHHHHHHHHHH
Q 010587 450 ATSMSYPGSVHGAFSTGLMAAEDCRMRV 477 (506)
Q Consensus 450 ~~~~~~~g~~egA~~sG~~aA~~i~~~l 477 (506)
++.. .++++|+.||.++|++|++.|
T Consensus 444 ~~~g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 444 SFEG---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp TTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 8754 579999999999999999877
No 12
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=9.2e-38 Score=319.46 Aligned_cols=423 Identities=19% Similarity=0.221 Sum_probs=269.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecC-----------------CCcEeecCCceeeCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYS-----------------FGFPVDLGASWLHGVC 88 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~-----------------~g~~~d~G~~~~~~~~ 88 (506)
.+++||+|||||++||+||+.|++.|++|+|||+++++||++.+... .|..+|.|+++++.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-- 86 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQ-- 86 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEET--
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhccc--
Confidence 45789999999999999999999999999999999999999988664 57789999998874
Q ss_pred CCCchHHHHHhcCCCeeecCCC--Ccccc-cchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHH
Q 010587 89 QENPLAPVISRLGLPLYRTSGD--NSVLY-DHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKE 165 (506)
Q Consensus 89 ~~~~~~~l~~~lgl~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (506)
.+ .+.++++++|++....... ....+ ..+.. +......++.. ...+...+..++..
T Consensus 87 ~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------~~g~~~~~~~~-~~~~~~~~~~l~~~ 145 (489)
T 2jae_A 87 SH-ITLDYCRELGVEIQGFGNQNANTFVNYQSDTS-------------------LSGQSVTYRAA-KADTFGYMSELLKK 145 (489)
T ss_dssp TS-THHHHHHHHTCCEEEECCCCTTSEEECCCSST-------------------TTTCCEEHHHH-HHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHcCCceEEccccCCCceEEecCCcc-------------------cCCccccHHHH-hhhhhccHHHHHHH
Confidence 23 8899999999985443321 12221 11000 00000011100 00111111111111
Q ss_pred HHHHhhcCC------CCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHh-hh-hcccC-----Cccccccccccc----
Q 010587 166 TDKVREEHD------EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-ME-GWFAA-----DAETISLKSWDK---- 228 (506)
Q Consensus 166 ~~~~~~~~~------~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~-----~~~~~s~~~~~~---- 228 (506)
..... ... ++.++.+++.++ ... +....+.......++.. .. .+.+. +....+...+..
T Consensus 146 ~~~~~-~~~~~~~~~~~~~~~~~l~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (489)
T 2jae_A 146 ATDQG-ALDQVLSREDKDALSEFLSDF-GDL--SDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSF 221 (489)
T ss_dssp HHHHT-TTTTTSCHHHHHHHHHHHHHH-TTC--CTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGG
T ss_pred HHhcc-ccccccchhhHHHHHHHHHHh-hhh--hhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhh
Confidence 11100 000 011333443321 000 00000000000000000 00 00000 011111110110
Q ss_pred --ccccCCCccccccchHHHHHHHhcc---CCeeeCCeeEEEEEcCCcEEEEEcCC---cEEEcCEEEEecChhhhhcCc
Q 010587 229 --EELLPGGHGLMVRGYLPVINTLAKG---LDIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLGVLKART 300 (506)
Q Consensus 229 --~~~~~~~~~~~~~G~~~l~~~l~~g---~~i~~~~~V~~I~~~~~~v~V~~~~G---~~i~ad~VI~a~~~~~~~~~~ 300 (506)
..........+.+|++.|+++|.+. .+|++|++|++|+.++++|+|++.+| ++++||+||+|+|+..+..+.
T Consensus 222 ~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~ 301 (489)
T 2jae_A 222 DFGYDQAMMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQ 301 (489)
T ss_dssp GGCTTTSSSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTSE
T ss_pred hhccccCccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhCc
Confidence 0011234557899999999999863 57999999999999999999988877 589999999999999876532
Q ss_pred ccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCC-Ccceee-cCCCCcceeeecccc-CCCceEEE-EEeccchhH
Q 010587 301 IKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVV-SDTSYGCSYFLNLHK-ATGHCVLV-YMPAGQLAR 376 (506)
Q Consensus 301 ~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~-~~~~~~l~-~~~~~~~~~ 376 (506)
+ ++|+...+++.++++.+..|+++.|++++|++. .+.|.+ ..+......+.+... .....+++ .++.+..+.
T Consensus 302 --~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~ 377 (489)
T 2jae_A 302 --N--NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKRQE 377 (489)
T ss_dssp --E--CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHHHH
T ss_pred --c--CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCchhh
Confidence 2 688888999999999999999999999999754 444432 222222222222211 11234444 577777778
Q ss_pred HhhcCCHHHHHHHHHHHHHHHCCC-C-CCCcEEEecccCCCCCCCcccccCC------CCCChHHHHHhcCCCCceEeec
Q 010587 377 DIEKMSDEAAANFAFTQLKKILPD-A-SSPIQYLVSHWGTDANSLGSYSYDT------VGKSHDLYERLRIPVDNLFFAG 448 (506)
Q Consensus 377 ~~~~~~~~e~~~~~~~~L~~~~p~-~-~~~~~~~~~~w~~~~~~~g~~~~~~------~~~~~~~~~~~~~p~~~l~~aG 448 (506)
.|..++++++++.++++|.+++|. . ..+......+|..+++..|+|.... ++.....++.+++|.+||||||
T Consensus 378 ~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG 457 (489)
T 2jae_A 378 AFESLTHRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAG 457 (489)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECS
T ss_pred hhhcCCHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeE
Confidence 888999999999999999999986 3 4566677788999998888887554 6766677888899999999999
Q ss_pred cccCCcCcchhhHHHHHHHHHHHHHHHHHHHH
Q 010587 449 EATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 480 (506)
Q Consensus 449 ~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~~ 480 (506)
++++. +.++++||+.||.++|++|++.++.+
T Consensus 458 ~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 458 DHLSN-AIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp GGGBS-STTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHhcc-CccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99874 55899999999999999999988764
No 13
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=6.6e-39 Score=327.18 Aligned_cols=402 Identities=20% Similarity=0.232 Sum_probs=270.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCe-
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL- 104 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~- 104 (506)
..++||+|||||++||+||+.|+++|++|+|||+++++||+++|....|+.+|.|++++.. .+..+.++++++|++.
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~--~~~~~~~~~~~~gl~~~ 91 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLD--REPATRALAAALNLEGR 91 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEET--TCHHHHHHHHHTTCGGG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhh--hhHHHHHHHHHcCCcce
Confidence 3568999999999999999999999999999999999999999999999999999999974 3567889999999963
Q ss_pred -eecC--CCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHH-------HHHHHHHHHHHHHHHhhcCC
Q 010587 105 -YRTS--GDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTK-------VGEAFESILKETDKVREEHD 174 (506)
Q Consensus 105 -~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 174 (506)
.... ....+.+.++.. ..++...... ....+ +++...........
T Consensus 92 ~~~~~~~~~~~~~~~~g~~------------------------~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 146 (478)
T 2ivd_A 92 IRAADPAAKRRYVYTRGRL------------------------RSVPASPPAFLASDILPLGARL-RVAGELFSRRAPEG 146 (478)
T ss_dssp EECSCSSCCCEEEEETTEE------------------------EECCCSHHHHHTCSSSCHHHHH-HHHGGGGCCCCCTT
T ss_pred eeecCccccceEEEECCEE------------------------EECCCCHHHhccCCCCCHHHHH-HHhhhhhcCCCCCC
Confidence 2111 112222221110 0001000000 00001 11111111111124
Q ss_pred CCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccccc------------------------
Q 010587 175 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKE------------------------ 229 (506)
Q Consensus 175 ~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~------------------------ 229 (506)
++.++.+++.+. +.+++.+.++.++ ...++.++..+++......
T Consensus 147 ~~~s~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (478)
T 2ivd_A 147 VDESLAAFGRRH-----------LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQ 215 (478)
T ss_dssp CCCBHHHHHHHH-----------TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHh-----------hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhcccc
Confidence 567899987642 3445555555554 4566666666664322100
Q ss_pred ----cccC----CCccccccchHHHHHHHhc--cCCeeeCCeeEEEEEcCCcEEEEE---cCCcEEEcCEEEEecChhhh
Q 010587 230 ----ELLP----GGHGLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 230 ----~~~~----~~~~~~~~G~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~V~~---~~G~~i~ad~VI~a~~~~~~ 296 (506)
.... ....++.+|++.++++|.+ |++|+++++|++|+.+++++.|++ .+|++++||+||+|+|+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 216 AALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp C----CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred ccCcccccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 0001 4567889999999999986 569999999999999888888888 67778999999999999987
Q ss_pred hcCcccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCCCcceeecCC---CCc-ceeeecc----ccCCCceEEEE
Q 010587 297 KARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDT---SYG-CSYFLNL----HKATGHCVLVY 368 (506)
Q Consensus 297 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~~~---~~~-~~~~~~~----~~~~~~~~l~~ 368 (506)
..+ .|.+|+...+.+..+.+.+..++.+.++.++|+.....+.+.+. ... ...+.+. ..+.+..++++
T Consensus 296 ~~l----l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~ 371 (478)
T 2ivd_A 296 AKL----LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSC 371 (478)
T ss_dssp HHH----HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEE
T ss_pred HHH----hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEE
Confidence 653 35688888889999999999999999999988753223444321 111 1122211 12456677888
Q ss_pred EeccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCCCcEEEecccCCCCCCCcccccCCCCCCh---HHHHHhcCCCCceE
Q 010587 369 MPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIPVDNLF 445 (506)
Q Consensus 369 ~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~---~~~~~~~~p~~~l~ 445 (506)
++.+..+..+...+++++.+.++++|.+++|....|......+|... ++.| .+++.. ...+.+.+ .+|||
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~---~p~~---~~g~~~~~~~~~~~~~~-~~~l~ 444 (478)
T 2ivd_A 372 MVGGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLG---IPQY---NLGHLERVAAIDAALQR-LPGLH 444 (478)
T ss_dssp EEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSC---CBCC---BTTHHHHHHHHHHHHHT-STTEE
T ss_pred EeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCc---ccCC---CcCHHHHHHHHHHHHhh-CCCEE
Confidence 87777666677889999999999999999987667887778889642 2222 244321 12223333 68999
Q ss_pred eeccccCCcCcchhhHHHHHHHHHHHHHHHHHHH
Q 010587 446 FAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 479 (506)
Q Consensus 446 ~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~ 479 (506)
+||+++.. ++++||+.||+++|++|+..+..
T Consensus 445 ~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 445 LIGNAYKG---VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp ECSTTTSC---CSHHHHHHHHHHHHHHHCC----
T ss_pred EEccCCCC---CCHHHHHHHHHHHHHHHHHhhcc
Confidence 99999742 57999999999999999877654
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=3.7e-38 Score=321.32 Aligned_cols=410 Identities=19% Similarity=0.234 Sum_probs=275.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~ 105 (506)
++||+|||||++||+||++|++.| ++|+|||+++++||++.|....|+.+|.|++++.. ....+.++++++|++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~l~~~lg~~~~ 81 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVA--RKHILTDLIEAIGLGEK 81 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEET--TSTHHHHHHHHTTCGGG
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhc--ccHHHHHHHHHcCCcce
Confidence 589999999999999999999999 99999999999999999999999999999998874 35678999999999743
Q ss_pred ecC--CCCcccccchhhhHHHHHHHHhhhccccceeec-CCCCccCHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCC
Q 010587 106 RTS--GDNSVLYDHDLERVLKTVVVSLIQANLCYALFD-MDGNQVPQELVTKVGEAFESILKETDKVREE----HDEDMS 178 (506)
Q Consensus 106 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~s 178 (506)
... ....+.+..+.....+.... . ........ .....+.. ..+. .+..... .... ..++.+
T Consensus 82 ~~~~~~~~~~~~~~g~~~~~p~~~~--~--~~p~~~~~~~~~~~~~~--~~~~-----~~~~~~~-~~~~~~~~~~~~~s 149 (475)
T 3lov_A 82 LVRNNTSQAFILDTGGLHPIPKGAV--M--GIPTDLDLFRQTTLLTE--EEKQ-----EVADLLL-HPSDSLRIPEQDIP 149 (475)
T ss_dssp EEECCCCCEEEEETTEEEECCSSEE--T--TEESCHHHHTTCSSSCH--HHHH-----HHHHHHH-SCCTTCCCCSSCCB
T ss_pred EeecCCCceEEEECCEEEECCCccc--c--cCcCchHHHhhccCCCh--hHHH-----HhhCccc-CCcccccCCCCCcC
Confidence 321 22222222211100000000 0 00000000 00000000 0111 1111111 1111 346788
Q ss_pred HHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCccccccccccccc---------c-----------------
Q 010587 179 IQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEE---------L----------------- 231 (506)
Q Consensus 179 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~---------~----------------- 231 (506)
+.+++.. .+..++.+.++.++ .+.++.++..+++....... .
T Consensus 150 ~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 218 (475)
T 3lov_A 150 LGEYLRP-----------RLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTP 218 (475)
T ss_dssp HHHHHHH-----------HHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------
T ss_pred HHHHHHH-----------HhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccc
Confidence 9998763 24455666666665 56788888887765322110 0
Q ss_pred -----cCCCccccccchHHHHHHHhccC---CeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccc
Q 010587 232 -----LPGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKF 303 (506)
Q Consensus 232 -----~~~~~~~~~~G~~~l~~~l~~g~---~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~ 303 (506)
..+....+.+|++.+++.|.+.+ +|++|++|++|+.++++|.|++.+| +++||+||+|+|+..+..++..
T Consensus 219 ~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~- 296 (475)
T 3lov_A 219 QTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPD- 296 (475)
T ss_dssp ------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHCTT-
T ss_pred cccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHcCc-
Confidence 02334578999999999998755 8999999999999999999999999 8999999999999987764322
Q ss_pred cCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCCCcceeecCCCCcc---e-eee----ccccCCCceEEEEEeccchh
Q 010587 304 EPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGC---S-YFL----NLHKATGHCVLVYMPAGQLA 375 (506)
Q Consensus 304 ~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~----~~~~~~~~~~l~~~~~~~~~ 375 (506)
+++ +.+..+.+.+..++.+.|+.+++......|.+.+..... . .+. +...+. ..++..++.+..+
T Consensus 297 -~~~-----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~ 369 (475)
T 3lov_A 297 -AHL-----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGN 369 (475)
T ss_dssp -SCC-----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTB
T ss_pred -cCH-----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCC
Confidence 222 677889999999999999988843333446655433211 1 111 112233 5667777766666
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHCCCCCCCcEEEecccCCCCCCCcccccCCCCC---ChHHHHHhcCCCCceEeeccccC
Q 010587 376 RDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGK---SHDLYERLRIPVDNLFFAGEATS 452 (506)
Q Consensus 376 ~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~---~~~~~~~~~~p~~~l~~aG~~~~ 452 (506)
..+..++++++++.++++|.++++...+|....+++|... .+.| .+|. .....+.+.+|.+|||+||+++.
T Consensus 370 ~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a---~p~~---~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~ 443 (475)
T 3lov_A 370 DHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDG---LPAY---TVGHADRIQRVREEVLAQYPGIYLAGLAYD 443 (475)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEE---EECC---CTTHHHHHHHHHHHHHHHSTTEEECSTTTS
T ss_pred CcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccC---CCCC---CCChHHHHHHHHHHHHhhCCCEEEEccCCC
Confidence 6788899999999999999999987667888889999753 2233 2333 23345556677899999999876
Q ss_pred CcCcchhhHHHHHHHHHHHHHHHHHHHH
Q 010587 453 MSYPGSVHGAFSTGLMAAEDCRMRVLER 480 (506)
Q Consensus 453 ~~~~g~~egA~~sG~~aA~~i~~~l~~~ 480 (506)
. .++++|+.||.++|++|+..+...
T Consensus 444 g---~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 444 G---VGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp C---SSHHHHHHHHHHHHHHHHHTC---
T ss_pred C---CCHHHHHHHHHHHHHHHHHHhhcc
Confidence 4 579999999999999998876553
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=3.4e-37 Score=316.53 Aligned_cols=416 Identities=20% Similarity=0.235 Sum_probs=268.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~ 105 (506)
.+++||+|||||++||+||+.|++.|++|+|+|+++++||++.|...+|+.+|.|+++++. .+..+.++++++|+...
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTE--SEGDVTFLIDSLGLREK 88 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCC--CSHHHHHHHHHTTCGGG
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCccccc--CcHHHHHHHHHcCCccc
Confidence 4568999999999999999999999999999999999999999998999999999999863 34578999999999643
Q ss_pred ecCC---CCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHH
Q 010587 106 RTSG---DNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRA 182 (506)
Q Consensus 106 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 182 (506)
.... ...+.+.++.....+......... ..+.. ..++......+.............+.++.+|
T Consensus 89 ~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 155 (504)
T 1sez_A 89 QQFPLSQNKRYIARNGTPVLLPSNPIDLIKS-----------NFLST--GSKLQMLLEPILWKNKKLSQVSDSHESVSGF 155 (504)
T ss_dssp EECCSSCCCEEEESSSSEEECCSSHHHHHHS-----------SSSCH--HHHHHHHTHHHHC----------CCCBHHHH
T ss_pred ceeccCCCceEEEECCeEEECCCCHHHHhcc-----------ccCCH--HHHHHHhHhhhccCcccccccCCCCccHHHH
Confidence 2111 111111111100000000000000 00000 0111100011100000000012345789998
Q ss_pred HHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCccccccccccc------------------cc-------------
Q 010587 183 ISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDK------------------EE------------- 230 (506)
Q Consensus 183 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~------------------~~------------- 230 (506)
+.+. +.+++++.++.++ .+.++.++..+|+..... ..
T Consensus 156 l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 224 (504)
T 1sez_A 156 FQRH-----------FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPK 224 (504)
T ss_dssp HHHH-----------HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------C
T ss_pred HHHH-----------cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccc
Confidence 8643 4456666666654 456777777776542110 00
Q ss_pred -----ccCCCccccccchHHHHHHHhcc---CCeeeCCeeEEEEEcCCc------EEEEEc--CC---cEEEcCEEEEec
Q 010587 231 -----LLPGGHGLMVRGYLPVINTLAKG---LDIRLGHRVTKITRHYIG------VKVTVE--GG---KTFVADAVVVAV 291 (506)
Q Consensus 231 -----~~~~~~~~~~~G~~~l~~~l~~g---~~i~~~~~V~~I~~~~~~------v~V~~~--~G---~~i~ad~VI~a~ 291 (506)
....+..++.||++.|+++|.+. .+|++|++|++|+.++++ +.|++. +| ++++||+||+|+
T Consensus 225 ~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~ 304 (504)
T 1sez_A 225 TSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTA 304 (504)
T ss_dssp CCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECS
T ss_pred hhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECC
Confidence 01124567899999999999874 579999999999988777 777664 45 578999999999
Q ss_pred ChhhhhcCccc-ccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCC-CcceeecCCCC------c-c----eeeeccc
Q 010587 292 PLGVLKARTIK-FEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVSDTSY------G-C----SYFLNLH 358 (506)
Q Consensus 292 ~~~~~~~~~~~-~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~g~~~~~~~------~-~----~~~~~~~ 358 (506)
|+..+..++.. ..+++++.. +..+.+.+..++.+.|+.++|+.. ...+++.+... . . ....+..
T Consensus 305 p~~~l~~ll~~~~~~~~~~~~---l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~ 381 (504)
T 1sez_A 305 PLCDVKSMKIAKRGNPFLLNF---IPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDR 381 (504)
T ss_dssp CHHHHHTSEEESSSSBCCCTT---SCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGG
T ss_pred CHHHHHHHhhcccCCcccHHH---HhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCc
Confidence 99998876531 112233321 566777788899999999988642 22344333211 0 0 1122223
Q ss_pred cCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCCCcEEEecccCCCCCCCcccccCCCCCCh--HHHHH
Q 010587 359 KATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH--DLYER 436 (506)
Q Consensus 359 ~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~--~~~~~ 436 (506)
.+.+..++++++.+..+..+..++++++++.++++|.++++...+|..+.+.+|... ++.| .+++.. +..+.
T Consensus 382 ~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~---~p~~---~~g~~~~~~~~~~ 455 (504)
T 1sez_A 382 APNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKA---FPLY---GHNYDSVLDAIDK 455 (504)
T ss_dssp SCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEE---EECC---CTTHHHHHHHHHH
T ss_pred CCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCC---CCcc---CcCHHHHHHHHHH
Confidence 356677788888877777788899999999999999999987556888888899642 1222 233221 12234
Q ss_pred hcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHHHH
Q 010587 437 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 479 (506)
Q Consensus 437 ~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~ 479 (506)
..+|++|||+||++++. ++++||+.||.+||++|++.+..
T Consensus 456 ~~~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 456 MEKNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp HHHHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhh
Confidence 45678999999999863 68999999999999999987643
No 16
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=5.9e-36 Score=300.74 Aligned_cols=403 Identities=16% Similarity=0.121 Sum_probs=258.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCeeecC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLYRTS 108 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~~~~ 108 (506)
+||+|||||++||+||++|+++|++|+|||+++++||++.+...+|+.+|.|++++.+......+.++++++|++.....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 59999999999999999999999999999999999999999999999999998766544445678899999998643221
Q ss_pred C-CCccccc-chhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 010587 109 G-DNSVLYD-HDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISIV 186 (506)
Q Consensus 109 ~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 186 (506)
. .....+. .+.. .... .......+......+..... .++.............+.++.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~l~~~ 145 (425)
T 3ka7_A 81 SEMTTVRVPLKKGN-------PDYV-KGFKDISFNDFPSLLSYKDR-------MKIALLIVSTRKNRPSGSSLQAWIKSQ 145 (425)
T ss_dssp CCCCEEEEESSTTC-------CSST-TCEEEEEGGGGGGGSCHHHH-------HHHHHHHHHTTTSCCCSSBHHHHHHHH
T ss_pred cCCceEEeecCCCc-------cccc-ccccceehhhhhhhCCHHHH-------HHHHHHHHhhhhcCCCCCCHHHHHHHh
Confidence 1 1111111 0000 0000 00000000000001111111 111111111111334567899988754
Q ss_pred HccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccc---cccccCCCccccccchHHHHHHHhc-----cCCee
Q 010587 187 FDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWD---KEELLPGGHGLMVRGYLPVINTLAK-----GLDIR 257 (506)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i~ 257 (506)
+ ..+.++.++.++ ...++.++..+++.... ......++..++.+|++.++++|.+ |++|+
T Consensus 146 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~ 214 (425)
T 3ka7_A 146 V-----------SDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIIDALETVISANGGKIH 214 (425)
T ss_dssp C-----------CCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHHHHHHHHHHHHHTTCEEE
T ss_pred c-----------CCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHHHHcCCEEE
Confidence 2 233344444443 34566677777654322 1112335667889999999988864 88999
Q ss_pred eCCeeEEEEEcCCcEE-EEEcCCcEEEcCEEEEecChhhhhcCcccccCCC--ChHHHHHHHhcCCccccEEEEEeCCCC
Q 010587 258 LGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRL--PDWKEAAIDDLGVGIENKIIMHFDKVF 334 (506)
Q Consensus 258 ~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~l--p~~~~~~~~~~~~~~~~~v~~~~~~~~ 334 (506)
++++|++|+.++++++ |++. |++++||.||+|+|+..+..++.. .+.+ |+.+.+.+..+.+.+..++.+.++++.
T Consensus 215 ~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 292 (425)
T 3ka7_A 215 TGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSE-ALSKEADAAYFKMVGTLQPSAGIKICLAADEPL 292 (425)
T ss_dssp CSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTT-TCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCS
T ss_pred ECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCC-cccccCCHHHHHHhhCcCCCceEEEEeecCCCc
Confidence 9999999999988887 7664 779999999999999888764432 2333 777788889999988888999999887
Q ss_pred CCCCCcceeecCCCC-------cceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCCCcEE
Q 010587 335 WPNVEFLGVVSDTSY-------GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQY 407 (506)
Q Consensus 335 ~~~~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~ 407 (506)
+... +.+..... ..+..++...++|+.++.++....+ +. .+. .++.++.++++|.+++|+ ..+...
T Consensus 293 ~~~~---~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~~-~~~-~~~~~~~~~~~l~~~~p~-~~~~~~ 365 (425)
T 3ka7_A 293 VGHT---GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP-EN-VKN-LESEIEMGLEDLKEIFPG-KRYEVL 365 (425)
T ss_dssp SCSS---SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-GG-GGG-HHHHHHHHHHHHHHHSTT-CCEEEE
T ss_pred cCcC---EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-cc-ccc-hHHHHHHHHHHHHHhCCC-CceEEE
Confidence 6432 22221111 1112223344667777766544332 11 122 345679999999999987 345555
Q ss_pred EecccCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHH
Q 010587 408 LVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 474 (506)
Q Consensus 408 ~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~ 474 (506)
.+.+|.. +++.|. ++. ..++..++|++|||+|||++.+.++.+|++|+.||++||++|+
T Consensus 366 ~v~~~~~---~~P~~~---~~~--~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 366 LIQSYHD---EWPVNR---AAS--GTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EEEEEBT---TBCSBS---SCT--TCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred EEEEECC---Cccccc---ccc--CCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 6778864 333333 222 2345567889999999999988666799999999999999876
No 17
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=311.70 Aligned_cols=405 Identities=21% Similarity=0.236 Sum_probs=266.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCCCCCeeEEeecC-CCcEeecCCceeeCCC-CCCchHHHHHhcCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF--KVVLLESRDRVGGRVHTDYS-FGFPVDLGASWLHGVC-QENPLAPVISRLGLP 103 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~-~~~~~~~l~~~lgl~ 103 (506)
++||+|||||++||+||++|+++|. +|+|||+++++||+++|... +|+.+|.|++++.... .+..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 5799999999999999999999999 99999999999999999655 5999999999875321 134578999999997
Q ss_pred --eeecCCCC-----cccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 010587 104 --LYRTSGDN-----SVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDED 176 (506)
Q Consensus 104 --~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (506)
........ .+.+..+.....+.. ....... ...+.... +...+..... .....++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~---------~~~~~~~-~~~~~~~~-------~~~~~~~~~~-~~~~~~~ 143 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYVGGALHALPTG---------LRGLLRP-SPPFSKPL-------FWAGLRELTK-PRGKEPD 143 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEETTEEEECCCS---------SCC---C-CTTSCSCS-------SHHHHTTTTS-CCCCSSC
T ss_pred ceeeecCCCCchhcceEEEECCEEEECCCC---------hhhcccc-cchhhhHH-------HHHHHHhhhc-CCCCCCC
Confidence 22221110 111111110000000 0000000 00000000 0111111111 1123456
Q ss_pred CCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCccccccccccccc-------------------------
Q 010587 177 MSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEE------------------------- 230 (506)
Q Consensus 177 ~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~------------------------- 230 (506)
.++.+++.+ .+..++.+.++.++ .+.++.++.++|+.......
T Consensus 144 ~s~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~ 212 (477)
T 3nks_A 144 ETVHSFAQR-----------RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPD 212 (477)
T ss_dssp CBHHHHHHH-----------HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCC
T ss_pred cCHHHHHHH-----------hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCc
Confidence 788888763 34455666666654 56777777777765432110
Q ss_pred --------ccCCCccccccchHHHHHHHhc-----cCCeeeCCeeEEEEEcCCc-EEEEEcCCcEEEcCEEEEecChhhh
Q 010587 231 --------LLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 231 --------~~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
........+.+|++.++++|.+ |++|++|++|++|+.++++ +.|++. |.++.||+||+|+|+..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 213 SALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPASVL 291 (477)
T ss_dssp CHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHHHH
T ss_pred hhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHHHH
Confidence 0012346789999999998864 7899999999999988777 888775 448999999999999887
Q ss_pred hcCcccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCCCcceeecCCCC---cce-eeec-----cccCCCceEEE
Q 010587 297 KARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSY---GCS-YFLN-----LHKATGHCVLV 367 (506)
Q Consensus 297 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~~~~~---~~~-~~~~-----~~~~~~~~~l~ 367 (506)
..++ +.+++...+.+.++++.+..++.+.|+.++|+...+ |.+.+... ... .|.+ ...+++..+++
T Consensus 292 ~~ll----~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~ 366 (477)
T 3nks_A 292 SELL----PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGF-GHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVT 366 (477)
T ss_dssp HHHS----CGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSS-EEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEE
T ss_pred HHhc----cccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCc-eEEccCCCCCCceEEEEeccccCCCCCCCCceEEE
Confidence 7643 334466777888899999999999999999975543 66654321 111 1211 11133678888
Q ss_pred EEeccchhHHhh----cCCHHHHHHHHHHHHHHHCCCCCCCcEEEecccCCCCCCCcccccCCCCCCh---HHHHHhcCC
Q 010587 368 YMPAGQLARDIE----KMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIP 440 (506)
Q Consensus 368 ~~~~~~~~~~~~----~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~---~~~~~~~~p 440 (506)
+++.+.+...+. .++++++++.++++|.++++...+|....+.+|.. +++.|. +++.. .....+...
T Consensus 367 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~---a~p~~~---~g~~~~~~~~~~~l~~~ 440 (477)
T 3nks_A 367 VMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKN---CIPQYT---LGHWQKLESARQFLTAH 440 (477)
T ss_dssp EEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEE---EEECCB---TTHHHHHHHHHHHHHHT
T ss_pred EEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCC---ccCCCC---CCHHHHHHHHHHHHHhc
Confidence 888777665553 46899999999999999997666788888889964 333443 44322 222233333
Q ss_pred CCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHH
Q 010587 441 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 476 (506)
Q Consensus 441 ~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~ 476 (506)
.+||++||+++.. .++++|+.||.++|++|+.+
T Consensus 441 ~~~l~l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 441 RLPLTLAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp TCSEEECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 4699999999754 57999999999999998753
No 18
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=5.5e-36 Score=307.40 Aligned_cols=429 Identities=15% Similarity=0.131 Sum_probs=201.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCe---
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL--- 104 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~--- 104 (506)
+++|||||||++||+||++|+++|++|+|||+++++||+++|.+.+|+.+|.|++++.. ...+.++++.+|.+.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~---~~~~~~l~~~~g~~~~~~ 77 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITD---PSAIEELFALAGKQLKEY 77 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSC---THHHHHHHHTTTCCGGGT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecC---chhHHHHHHHhcchhhhc
Confidence 57899999999999999999999999999999999999999999999999999998853 234566777776532
Q ss_pred ---eecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHH---HHHHHHHHHHHHHHHHHhhc------
Q 010587 105 ---YRTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELV---TKVGEAFESILKETDKVREE------ 172 (506)
Q Consensus 105 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------ 172 (506)
.+......+.+..+.. ..+......+...+. ....+.+.++...+......
T Consensus 78 ~~~~~~~~~~~~~~~~g~~-----------------~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (501)
T 4dgk_A 78 VELLPVTPFYRLCWESGKV-----------------FNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLG 140 (501)
T ss_dssp CCEEEESSSEEEEETTSCE-----------------EEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--C
T ss_pred eeeEecCcceEEEcCCCCE-----------------EEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhcc
Confidence 2222111111111100 000000000000000 00011233333333332211
Q ss_pred CCCCCCHHHHHHHHHccCch--------hhhhhhHHHHHHHHHHhhhhcccCCcccccccc-cccccccCCCccccccch
Q 010587 173 HDEDMSIQRAISIVFDRRPE--------LRLEGLAHKVLQWYLCRMEGWFAADAETISLKS-WDKEELLPGGHGLMVRGY 243 (506)
Q Consensus 173 ~~~~~s~~~~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~G~ 243 (506)
.....+..+.+......... .-...+.++.++.++.......+..+...+... +........+.++++||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG~ 220 (501)
T 4dgk_A 141 TVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHALEREWGVWFPRGGT 220 (501)
T ss_dssp CCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHHHSCCCEEEETTHH
T ss_pred ccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhhhccCCeEEeCCCC
Confidence 11122333332211000000 000001111222222222222223332222111 111112234556899999
Q ss_pred HHHHHHHhc-----cCCeeeCCeeEEEEEcCCcEE-EEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHh
Q 010587 244 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDD 317 (506)
Q Consensus 244 ~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~ 317 (506)
+.|+++|++ |++|++|++|++|+.++++++ |++++|+++.||.||+++++..+...++.- .+++....+.+..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~-~~~~~~~~~~~~~ 299 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQ-HPAAVKQSNKLQT 299 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC-------------------------
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccc-cccchhhhhhhhc
Confidence 999999864 889999999999999999986 999999999999999999987765544432 2333444455555
Q ss_pred cCCc-cccEEEEEeCCCCCCCCC--c-c--------------eeecCCCC----cceeeeccccCCCceEEEEEeccch-
Q 010587 318 LGVG-IENKIIMHFDKVFWPNVE--F-L--------------GVVSDTSY----GCSYFLNLHKATGHCVLVYMPAGQL- 374 (506)
Q Consensus 318 ~~~~-~~~~v~~~~~~~~~~~~~--~-~--------------g~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~- 374 (506)
..+. ...++++.++.+...-.. + + +.+.+... .....++...|+|+..+.+++....
T Consensus 300 ~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~ 379 (501)
T 4dgk_A 300 KRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHL 379 (501)
T ss_dssp ---CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCT
T ss_pred cccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCcc
Confidence 5554 345566777654321100 0 0 00000000 0011122334667766655543221
Q ss_pred ---hHHhhcCCHHHHHHHHHHHHHHH-CCCCCCCcEEEec----ccCCCCCC-Cc-ccccC-CCCCChHHHHHh-cCCCC
Q 010587 375 ---ARDIEKMSDEAAANFAFTQLKKI-LPDASSPIQYLVS----HWGTDANS-LG-SYSYD-TVGKSHDLYERL-RIPVD 442 (506)
Q Consensus 375 ---~~~~~~~~~~e~~~~~~~~L~~~-~p~~~~~~~~~~~----~w~~~~~~-~g-~~~~~-~~~~~~~~~~~~-~~p~~ 442 (506)
..+|.. ..+++.+.+++.|++. +|++++.+..... .|...... .| .|... ...+....+|.. .+|++
T Consensus 380 ~~~~~~~~~-~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~ 458 (501)
T 4dgk_A 380 GTANLDWTV-EGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTIT 458 (501)
T ss_dssp TTSCCCHHH-HHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC------------------------------CCT
T ss_pred ccccccHHH-HHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCC
Confidence 112222 2567888899999875 4887654433321 23221111 12 12211 122333345543 47899
Q ss_pred ceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHHHHH
Q 010587 443 NLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 480 (506)
Q Consensus 443 ~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~~ 480 (506)
|||+||+++.++ +++.||+.||+.||++|+++|+..
T Consensus 459 gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 459 NLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp TEEECCCH--------HHHHHHHHHHHHHHHHHHHC--
T ss_pred CEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999998764 689999999999999999999753
No 19
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=1.2e-35 Score=306.75 Aligned_cols=244 Identities=18% Similarity=0.170 Sum_probs=181.4
Q ss_pred CccccccchHHHHHHHhc----cCCeeeCCeeE--EEEEcCCc-------EEE-EEcCCc--EEEcCEEEEecChhhhhc
Q 010587 235 GHGLMVRGYLPVINTLAK----GLDIRLGHRVT--KITRHYIG-------VKV-TVEGGK--TFVADAVVVAVPLGVLKA 298 (506)
Q Consensus 235 ~~~~~~~G~~~l~~~l~~----g~~i~~~~~V~--~I~~~~~~-------v~V-~~~~G~--~i~ad~VI~a~~~~~~~~ 298 (506)
....+.||+++|+++|.+ |..|+++++|+ +|+.++++ |+| .+.+|+ +++||+||+|+|+..+..
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~ 417 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTP 417 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHH
T ss_pred ceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhh
Confidence 356789999999998865 56899999999 99986554 888 456676 789999999999988742
Q ss_pred ----Cccc----------------------ccCCC-C-------hHHHHHHHhcCCccccEEEEEe-----CCCCCCCC-
Q 010587 299 ----RTIK----------------------FEPRL-P-------DWKEAAIDDLGVGIENKIIMHF-----DKVFWPNV- 338 (506)
Q Consensus 299 ----~~~~----------------------~~~~l-p-------~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~- 338 (506)
..+. +.|.| | ....++++++++....|+++.| +++||.+.
T Consensus 418 ~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~ 497 (721)
T 3ayj_A 418 IVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWR 497 (721)
T ss_dssp HHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEET
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccC
Confidence 1122 23446 8 8899999999999999999999 99999865
Q ss_pred -CcceeecCCCCcc-eee-e-----ccccCCCceEEEEEeccchhHHh------hcCCHHHH-------HHHHHHHHH--
Q 010587 339 -EFLGVVSDTSYGC-SYF-L-----NLHKATGHCVLVYMPAGQLARDI------EKMSDEAA-------ANFAFTQLK-- 395 (506)
Q Consensus 339 -~~~g~~~~~~~~~-~~~-~-----~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~e~-------~~~~~~~L~-- 395 (506)
..++...++.... .++ + +...+....+|..|+++..+..+ ..+++++. ++.++++|.
T Consensus 498 g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~ 577 (721)
T 3ayj_A 498 GEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRY 577 (721)
T ss_dssp TEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCE
T ss_pred CCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhh
Confidence 1233333333332 233 1 11222233567789999888777 44555455 999999999
Q ss_pred HHCCCCC-----------C---CcEEEecccCCCCCCCcccccCCCCCCh------HHH--HHhcCCCCceEeeccccCC
Q 010587 396 KILPDAS-----------S---PIQYLVSHWGTDANSLGSYSYDTVGKSH------DLY--ERLRIPVDNLFFAGEATSM 453 (506)
Q Consensus 396 ~~~p~~~-----------~---~~~~~~~~w~~~~~~~g~~~~~~~~~~~------~~~--~~~~~p~~~l~~aG~~~~~ 453 (506)
+++|+.. . +.+...+.|..++ +.|+|....||+.. ++. .....|.++||||||+++.
T Consensus 578 ~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~ 656 (721)
T 3ayj_A 578 VKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH 656 (721)
T ss_dssp ECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS
T ss_pred ccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc
Confidence 8898654 1 2345788999999 99999988899832 222 2234577999999999996
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHH
Q 010587 454 SYPGSVHGAFSTGLMAAEDCRMRVLER 480 (506)
Q Consensus 454 ~~~g~~egA~~sG~~aA~~i~~~l~~~ 480 (506)
+.||+|||+.||.+||.+|...+...
T Consensus 657 -~~GWieGAl~Sa~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 657 -LGGWLEGAFMSALNAVAGLIVRANRG 682 (721)
T ss_dssp -CTTSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -CCceehHHHHHHHHHHHHHHHHhcCC
Confidence 56999999999999999999888663
No 20
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=2.2e-35 Score=304.06 Aligned_cols=404 Identities=14% Similarity=0.112 Sum_probs=255.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEeeCCCCCeeEEee-cCCCcEeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010587 27 RSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRVGGRVHTD-YSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~GG~~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~ 104 (506)
+++||+|||||++||+||++|++ .|++|+|||+++++||+++|. ..+|+.+|.|+|+++. .+..+.+++++++...
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~--~~~~v~~l~~e~~~~~ 86 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFS--HYKYFDDCLDEALPKE 86 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCC--CBHHHHHHHHHHSCSG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecC--CCHHHHHHHHHhCCcc
Confidence 46899999999999999999998 599999999999999999985 5689999999999863 4456889999987642
Q ss_pred ---eecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHH
Q 010587 105 ---YRTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQR 181 (506)
Q Consensus 105 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 181 (506)
........+.+.+... .+. +.......+..... .....+...............++++
T Consensus 87 ~~~~~~~~~~~i~~~g~~~---------------~~p-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~ 147 (513)
T 4gde_A 87 DDWYTHQRISYVRCQGQWV---------------PYP-FQNNISMLPKEEQV---KCIDGMIDAALEARVANTKPKTFDE 147 (513)
T ss_dssp GGEEEEECCEEEEETTEEE---------------ESS-GGGGGGGSCHHHHH---HHHHHHHHHHHHHHTCCSCCCSHHH
T ss_pred ceeEEecCceEEEECCeEe---------------ecc-hhhhhhhcchhhHH---HHHHHHHHHHHhhhcccccccCHHH
Confidence 2222222222222111 000 00000111221111 1122222222333334556678998
Q ss_pred HHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCccccccccccccc---------------------ccCC-Cccc
Q 010587 182 AISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEE---------------------LLPG-GHGL 238 (506)
Q Consensus 182 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~---------------------~~~~-~~~~ 238 (506)
++. ..+.+.+.+.++.++ .+.++.++.++++.+..... .... ....
T Consensus 148 ~~~-----------~~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (513)
T 4gde_A 148 WIV-----------RMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFP 216 (513)
T ss_dssp HHH-----------HHHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEE
T ss_pred HHH-----------HhhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeec
Confidence 876 346667777777765 66778888887765432110 0000 1123
Q ss_pred cccchHHHHHHHhc-----cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHH
Q 010587 239 MVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEA 313 (506)
Q Consensus 239 ~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~ 313 (506)
+++|++.++++|++ |++|++|++|++|..++++ |++.+|+++.||+||+|+|+..+..++. ++....
T Consensus 217 ~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~------~~~~~~ 288 (513)
T 4gde_A 217 ARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFLAEAMN------DQELVG 288 (513)
T ss_dssp SSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHHHHHTT------CHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHHHHhcC------chhhHh
Confidence 57999999999965 6689999999999987765 5678999999999999999998776432 244556
Q ss_pred HHHhcCCccccEEEEEeCCCCCCC---CCcceeecCCCCc--c---eeeecccc---------------------CCCce
Q 010587 314 AIDDLGVGIENKIIMHFDKVFWPN---VEFLGVVSDTSYG--C---SYFLNLHK---------------------ATGHC 364 (506)
Q Consensus 314 ~~~~~~~~~~~~v~~~~~~~~~~~---~~~~g~~~~~~~~--~---~~~~~~~~---------------------~~~~~ 364 (506)
....+.|.+...+.+.++.....+ ..+.........+ . ..+.+... +.+..
T Consensus 289 ~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (513)
T 4gde_A 289 LTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEG 368 (513)
T ss_dssp HHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECC
T ss_pred hhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcc
Confidence 677888888888888776443211 1111100000000 0 01111111 11222
Q ss_pred EEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCC--CcEEEecccCCCCCCCcccccCCCCCChHHHHHhcCCCC
Q 010587 365 VLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASS--PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVD 442 (506)
Q Consensus 365 ~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~--~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~ 442 (506)
.+..+..+.....+..++++++++.++++|.++.+-... ++...+.+|. ++++.|...+.......++.+.. +
T Consensus 369 ~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~---~ayP~y~~~~~~~~~~~~~~l~~--~ 443 (513)
T 4gde_A 369 PYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFD---HGYPTPTLEREGTLTQILPKLQD--K 443 (513)
T ss_dssp CEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEE---EEEECCBTTHHHHHHHHHHHHHH--T
T ss_pred eEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECC---CeecccCHhHHHHHHHHHHHHhh--c
Confidence 333333333344567889999999999999999864333 3456667774 45555543322233445555555 4
Q ss_pred ceEeeccccCCcCc-chhhHHHHHHHHHHHHHHH
Q 010587 443 NLFFAGEATSMSYP-GSVHGAFSTGLMAAEDCRM 475 (506)
Q Consensus 443 ~l~~aG~~~~~~~~-g~~egA~~sG~~aA~~i~~ 475 (506)
|||++|......|. ++|++|+.+|+.||++|+.
T Consensus 444 ~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 444 DIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 99999987766553 6899999999999999985
No 21
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=279.53 Aligned_cols=228 Identities=16% Similarity=0.180 Sum_probs=180.5
Q ss_pred cccccchHHHHHHHhc--cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHH
Q 010587 237 GLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 314 (506)
Q Consensus 237 ~~~~~G~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~ 314 (506)
+...+|++.++++|.+ |++|+++++|++|+.++++|+|++.+|++++||.||+|+|+..+..++..+.|.||+...+.
T Consensus 105 ~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~ 184 (342)
T 3qj4_A 105 FVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQ 184 (342)
T ss_dssp EECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHH
T ss_pred eecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHH
Confidence 4567889999999987 89999999999999999999999999977899999999999998887666667788888999
Q ss_pred HHhcCCccccEEEEEeCCCCCCCCCcceeecCCCCcce-eeeccccC-----CCceEEEEEeccchhHHhhcCCHHHHHH
Q 010587 315 IDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCS-YFLNLHKA-----TGHCVLVYMPAGQLARDIEKMSDEAAAN 388 (506)
Q Consensus 315 ~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~e~~~ 388 (506)
+..+++.+..++.+.|++++|.+..+.|.+.+...... .+.+..++ ++...++.+..+.++..+.+++++++.+
T Consensus 185 l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 264 (342)
T 3qj4_A 185 LEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQE 264 (342)
T ss_dssp HHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHH
T ss_pred HhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHH
Confidence 99999999999999999988877777787765443222 22333222 1234778888888888888999999999
Q ss_pred HHHHHHHHHCCCCCCCcEEEecccCCCCCCCcccccC-CCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHH
Q 010587 389 FAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYD-TVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGL 467 (506)
Q Consensus 389 ~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~-~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~ 467 (506)
.++++|.++++...+|+.+.+++|.. +.+.|... .+++.. ..+.+||++||||+.. +++|+|+.||.
T Consensus 265 ~~~~~l~~~~g~~~~p~~~~v~rW~~---a~p~~~~~~~~~~~~------~~~~~~l~laGd~~~g---~~v~~ai~sg~ 332 (342)
T 3qj4_A 265 LVFQQLENILPGLPQPIATKCQKWRH---SQVTNAAANCPGQMT------LHHKPFLACGGDGFTQ---SNFDGCITSAL 332 (342)
T ss_dssp HHHHHHHHHSCSCCCCSEEEEEEETT---CSBSSCCSSSCSCEE------EETTTEEEECSGGGSC---SSHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCceeeeccccc---cccccccCCCcceeE------ecCCccEEEEccccCC---CCccHHHHHHH
Confidence 99999999999888899999999964 33333221 122211 1356899999999865 79999999999
Q ss_pred HHHHHHHHH
Q 010587 468 MAAEDCRMR 476 (506)
Q Consensus 468 ~aA~~i~~~ 476 (506)
+||++|+..
T Consensus 333 ~aa~~i~~~ 341 (342)
T 3qj4_A 333 CVLEALKNY 341 (342)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHhh
Confidence 999998764
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=9.1e-34 Score=284.22 Aligned_cols=386 Identities=16% Similarity=0.125 Sum_probs=241.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCee--e
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY--R 106 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~--~ 106 (506)
+||+|||||++||+||++|++.|++|+|||+++++||++++...+|+.+|.|++++.+......+.++++++|+... +
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 58999999999999999999999999999999999999999999999999999776654445678899999998632 2
Q ss_pred cCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 010587 107 TSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISIV 186 (506)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 186 (506)
......+.+.+.... +......+....... +.......... .....+.++.+++...
T Consensus 81 ~~~~~~~~~~g~~~~------------------~~~~~~~l~~~~~~~----~~~~~~~~~~~-~~~~~~~s~~~~l~~~ 137 (421)
T 3nrn_A 81 SNPKGKILWEGKIFH------------------YRESWKFLSVKEKAK----ALKLLAEIRMN-KLPKEEIPADEWIKEK 137 (421)
T ss_dssp CSSSCEEEETTEEEE------------------GGGGGGGCC------------CCHHHHHTT-CCCCCCSBHHHHHHHH
T ss_pred CCCCeEEEECCEEEE------------------cCCchhhCCHhHHHH----HHHHHHHHHhc-cCCCCCCCHHHHHHHh
Confidence 222222222221110 000000011110001 11111111100 1122346788887643
Q ss_pred HccCchhhhhhhHHHHHHHHHHhh-hhcccCCccccccccccc---ccccCCCccccccchHHHHHHHhc-----cCCee
Q 010587 187 FDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDK---EELLPGGHGLMVRGYLPVINTLAK-----GLDIR 257 (506)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~---~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i~ 257 (506)
++..+.++.++.++ ...++.++..+++..... .....++..++.+|++.++++|.+ |++|+
T Consensus 138 ----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~ 207 (421)
T 3nrn_A 138 ----------IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENKGKIL 207 (421)
T ss_dssp ----------TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHHHHTTTCEEE
T ss_pred ----------cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHHHHHCCCEEE
Confidence 12333344444443 344566666666543221 112235567899999999988864 88999
Q ss_pred eCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCC
Q 010587 258 LGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN 337 (506)
Q Consensus 258 ~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 337 (506)
++++|++|+.+++++ | +.+|++++||.||+|+|+..+.+++. .+.+|+...+.+.++.+....++.+.++++..+.
T Consensus 208 ~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll~--~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~ 283 (421)
T 3nrn_A 208 TRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLIG--RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG 283 (421)
T ss_dssp SSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHHC--GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC
T ss_pred cCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhcC--cccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC
Confidence 999999999988888 6 55677999999999999988776432 1346777778888999888888899998775443
Q ss_pred CCcceeecCCCC------cceeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCCCCCCcEEEecc
Q 010587 338 VEFLGVVSDTSY------GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSH 411 (506)
Q Consensus 338 ~~~~g~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~ 411 (506)
.. ++..++. .....++...++|..++.+..... ..++++.++.++++|.+++| ......+.+
T Consensus 284 ~~---~~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~p---~~~~~~~~~ 351 (421)
T 3nrn_A 284 NT---IVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIFP---EGEPLLAQV 351 (421)
T ss_dssp SS---EEECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHCT---TCEEEEEEE
T ss_pred Ce---EEEcCCcceeeEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHcC---CCeEEEeee
Confidence 22 2222211 111222233455666655543221 22344669999999999999 333445666
Q ss_pred cCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHH
Q 010587 412 WGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 473 (506)
Q Consensus 412 w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i 473 (506)
|.. .++.|... ++.. .+ .+| +|||+|||++.+.+...||||+.||++||++|
T Consensus 352 ~~~---~~p~~~~~-~~~~---~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 352 YRD---GNPVNRTR-AGLH---IE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp C-----------------C---CC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred ccC---CCCccccc-CCCC---CC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 753 22333111 1111 11 567 99999999987632236699999999999987
No 23
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=100.00 E-value=1.6e-32 Score=278.39 Aligned_cols=404 Identities=13% Similarity=0.107 Sum_probs=259.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeCCCCCeeEEee-cCCCcEeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGGRVHTD-YSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~ 104 (506)
+++||+|||||++||+||++|+++| .+|+|+|+++++||++++. ..+|+.+|.|++++.. .+..+.++++++.-+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~l~~~~~~~~ 85 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFS--HYQYFDDVMDWAVQGW 85 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCC--SBHHHHHHHHHHCSCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCccccc--ChHHHHHHHHHHhhhh
Confidence 4689999999999999999999998 7999999999999999995 7789999999998853 3445778888874222
Q ss_pred eecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHH
Q 010587 105 YRTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAIS 184 (506)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 184 (506)
........+.+.+... .+. +......++..... ..+..++.. +......++.++++|+.
T Consensus 86 ~~~~~~~~~~~~g~~~---------------~~P-~~~~~~~l~~~~~~---~~~~~ll~~--~~~~~~~~~~s~~e~~~ 144 (484)
T 4dsg_A 86 NVLQRESWVWVRGRWV---------------PYP-FQNNIHRLPEQDRK---RCLDELVRS--HARTYTEPPNNFEESFT 144 (484)
T ss_dssp EEEECCCEEEETTEEE---------------ESS-GGGCGGGSCHHHHH---HHHHHHHHH--HHCCCSSCCSSHHHHHH
T ss_pred hhccCceEEEECCEEE---------------EeC-ccchhhhCCHHHHH---HHHHHHHHH--HhccCCCCCCCHHHHHH
Confidence 2222222222222111 000 00000112222111 112222222 11223456779999876
Q ss_pred HHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccccccc---------------------cCCCccc-ccc
Q 010587 185 IVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEEL---------------------LPGGHGL-MVR 241 (506)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~---------------------~~~~~~~-~~~ 241 (506)
+ .++.++.+.++.++ .+.++.+++++++.+...... ..+.+.+ ..|
T Consensus 145 ~-----------~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~g 213 (484)
T 4dsg_A 145 R-----------QFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRG 213 (484)
T ss_dssp H-----------HHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSS
T ss_pred H-----------HhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCC
Confidence 3 36666666666665 577888888888765321110 0111222 348
Q ss_pred chHHHHHHHhccC---CeeeC--CeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHH
Q 010587 242 GYLPVINTLAKGL---DIRLG--HRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAID 316 (506)
Q Consensus 242 G~~~l~~~l~~g~---~i~~~--~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~ 316 (506)
|++.++++|++.+ +|+++ ++|++|+.++++| ++.+|+++.||+||+|+|++.+..++....+++|+...+.+.
T Consensus 214 G~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~ 291 (484)
T 4dsg_A 214 GTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIAD 291 (484)
T ss_dssp CTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHH
T ss_pred CHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHh
Confidence 9999999998866 79999 5699999888765 457888999999999999999876554434567888889999
Q ss_pred hcCCccccEEEEEeCCCCCCC-CCcceeecCCCC----cc---eeeeccccCCCceEEEEEeccchhHHhhcCCHHHHHH
Q 010587 317 DLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSY----GC---SYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAAN 388 (506)
Q Consensus 317 ~~~~~~~~~v~~~~~~~~~~~-~~~~g~~~~~~~----~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~ 388 (506)
.+.+.+..++.+.|+.+...+ ....++..++.. .. ..+++...++++.+++...... +....+++++++
T Consensus 292 ~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l~~ 368 (484)
T 4dsg_A 292 KMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTLIE 368 (484)
T ss_dssp HCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSHHH
T ss_pred CCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHHHH
Confidence 999999999999998763221 122344333221 11 1222222345555555444332 344678899999
Q ss_pred HHHHHHHHHCCCCC-CCc-EEEecccCCCCCCCcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCc-chhhHHHHH
Q 010587 389 FAFTQLKKILPDAS-SPI-QYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYP-GSVHGAFST 465 (506)
Q Consensus 389 ~~~~~L~~~~p~~~-~~~-~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~-g~~egA~~s 465 (506)
.++++|.++..-.. +++ ...+.+|. .+++.|...+......+++.+.. . ||+++|.+....+. +.|+.|+.|
T Consensus 369 ~a~~~L~~~~~~~~~~~~~~~~v~r~~---~~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~s 443 (484)
T 4dsg_A 369 DCIVGCLASNLLLPEDLLVSKWHYRIE---KGYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQ 443 (484)
T ss_dssp HHHHHHHHTTSCCTTCCEEEEEEEEEE---EEEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHH
T ss_pred HHHHHHHHcCCCCccceEEEEEEEEeC---ccccCCCccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChHHHHHH
Confidence 99999999853212 233 23567774 34455442211122344554544 3 99999997665442 469999999
Q ss_pred HHHHHHHHH
Q 010587 466 GLMAAEDCR 474 (506)
Q Consensus 466 G~~aA~~i~ 474 (506)
|+.||++|+
T Consensus 444 g~~aa~~i~ 452 (484)
T 4dsg_A 444 GVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999886
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.97 E-value=3.2e-30 Score=258.80 Aligned_cols=391 Identities=15% Similarity=0.131 Sum_probs=224.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~ 105 (506)
+++||+|||||++||+||++|+++| ++|+|+|+++++||++.|....|+.+|.|++++.. .+..+.++++++|++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~--~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP--SYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT--TCHHHHHHHHHHCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC--CcHHHHHHHHHhCCccc
Confidence 5689999999999999999999999 89999999999999999998899999999998752 34578899999998754
Q ss_pred ecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHH----hh-------cCC
Q 010587 106 RTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKV----RE-------EHD 174 (506)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~ 174 (506)
.......+.+.++.. ...... +.. .......+.++....... .. ...
T Consensus 83 ~~~~~~~~~~~~g~~-------------------~~~~~~--~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (424)
T 2b9w_A 83 GPKLRREFLHEDGEI-------------------YVPEKD--PVR-GPQVMAAVQKLGQLLATKYQGYDANGHYNKVHED 140 (424)
T ss_dssp SCCCCEEEECTTSCE-------------------ECGGGC--TTH-HHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGG
T ss_pred cccccceeEcCCCCE-------------------eccccC--ccc-chhHHHHHHHHHHHHhhhhhhcccccchhhhhhh
Confidence 322211111111110 000000 000 000111111221111110 00 011
Q ss_pred CCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccc---c----ccccCCCccccccchHHH
Q 010587 175 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWD---K----EELLPGGHGLMVRGYLPV 246 (506)
Q Consensus 175 ~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~---~----~~~~~~~~~~~~~G~~~l 246 (506)
...++.+++.+.. .. .+.+.+..++ ...++ ++...++..+. . .....+..+.+.+|++.+
T Consensus 141 ~~~s~~~~l~~~~----------~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l 208 (424)
T 2b9w_A 141 LMLPFDEFLALNG----------CE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAM 208 (424)
T ss_dssp GGSBHHHHHHHTT----------CG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHH
T ss_pred hccCHHHHHHhhC----------cH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHH
Confidence 2457777765421 11 1233333443 22222 33344432211 0 001124455788999999
Q ss_pred HHHHhc--cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCcccc
Q 010587 247 INTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIEN 324 (506)
Q Consensus 247 ~~~l~~--g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ 324 (506)
+++|.+ +.+|++|++|++|+.+++++.|++.+| +++||+||+|+|+..+..+ .+++|+ ..+.+.++.+....
T Consensus 209 ~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~~~~----l~~~~~-~~~~~~~~~~~~~~ 282 (424)
T 2b9w_A 209 FEHLNATLEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEKFLDY----SDADDD-EREYFSKIIHQQYM 282 (424)
T ss_dssp HHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHHHTTS----BCCCHH-HHHHHTTCEEEEEE
T ss_pred HHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHHHhhc----cCCCHH-HHHHHhcCCcceeE
Confidence 999976 448999999999999888899999888 5999999999999876432 344433 33445556554322
Q ss_pred EEEEEeCCCCCCCCCcceeecCCC---Cc-ceeeeccccCCC-ceEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCC
Q 010587 325 KIIMHFDKVFWPNVEFLGVVSDTS---YG-CSYFLNLHKATG-HCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP 399 (506)
Q Consensus 325 ~v~~~~~~~~~~~~~~~g~~~~~~---~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p 399 (506)
+.+.+...+ +. +.+.+.... .. ...+.....+.+ ..+++.|..+.. ..+...+++++++.++++|.++.+
T Consensus 283 -~~~~~~~~~-~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~v~~~l~~l~~ 357 (424)
T 2b9w_A 283 -VDACLVKEY-PT--ISGYVPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRNH-PDYADKTQEECRQMVLDDMETFGH 357 (424)
T ss_dssp -EEEEEESSC-CS--SEEECGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCB-TTBCCCCHHHHHHHHHHHHHHTTC
T ss_pred -EEEEEeccC-Cc--ccccccCCCCCcCCCcceEEeeecCCCCceEEEEEeccCC-CcccccChHHHHHHHHHHHHHcCC
Confidence 222222222 11 122221110 00 011111111222 345566655432 445677889999999999998544
Q ss_pred CCCCCcEEEecccCCCCCC-CcccccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHH
Q 010587 400 DASSPIQYLVSHWGTDANS-LGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 474 (506)
Q Consensus 400 ~~~~~~~~~~~~w~~~~~~-~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~ 474 (506)
...+ .+....|...+.. ...|. .|. .....-.++.+|+||||++++. |++|+|+.||+++|++|+
T Consensus 358 ~~~~--~~~~~~w~~~p~~~~~~~~---~G~--~~~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 358 PVEK--IIEEQTWYYFPHVSSEDYK---AGW--YEKVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp CEEE--EEEEEEEEEEEECCHHHHH---TTH--HHHHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred cccc--cccccceeeeeccCHHHHh---ccH--HHHHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 2211 1223355421110 01111 111 1112223456799999999864 899999999999999875
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.96 E-value=1.8e-27 Score=231.18 Aligned_cols=321 Identities=16% Similarity=0.183 Sum_probs=215.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCeeec
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLYRT 107 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~~~ 107 (506)
++||+|||||++||++|+.|++.|++|+|||+++.+||++.+....+..+|.|..++... ...+.++++++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------- 72 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTAR--DRRFATAVKQW------- 72 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCC--SHHHHHHHHHH-------
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecC--CHHHHHHHHHH-------
Confidence 579999999999999999999999999999999999999988877888888887765311 00011111110
Q ss_pred CCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Q 010587 108 SGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISIVF 187 (506)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 187 (506)
...
T Consensus 73 -----------------------------------------------------------~~~------------------ 75 (336)
T 1yvv_A 73 -----------------------------------------------------------QAQ------------------ 75 (336)
T ss_dssp -----------------------------------------------------------HHH------------------
T ss_pred -----------------------------------------------------------HhC------------------
Confidence 000
Q ss_pred ccCchhhhhhhHHHHHHHHHHhhhhcccCCcccccccccccccccCCCccccccchHHHHHHHhccCCeeeCCeeEEEEE
Q 010587 188 DRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITR 267 (506)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~g~~i~~~~~V~~I~~ 267 (506)
.....+ ...........+. .............|+..+.+.+.+|++|+++++|++|+.
T Consensus 76 --------------------~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~ 133 (336)
T 1yvv_A 76 --------------------GHVAEW-TPLLYNFHAGRLS-PSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFR 133 (336)
T ss_dssp --------------------TSEEEE-CCCEEEESSSBCC-CCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEE
T ss_pred --------------------CCeeec-cccceeccCcccc-cCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEE
Confidence 000000 0000000000000 000011122345689999999999999999999999999
Q ss_pred cCCcEEEEEcCCcEEE-cCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCCCcceeecC
Q 010587 268 HYIGVKVTVEGGKTFV-ADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSD 346 (506)
Q Consensus 268 ~~~~v~V~~~~G~~i~-ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~~ 346 (506)
++++|.|++.+|+.+. ||.||+|+|...+.+++. + .+.....+..+.|.+..++.+.|+.++|.... +....
T Consensus 134 ~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~-~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 206 (336)
T 1yvv_A 134 GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLA-A----APKLASVVAGVKMDPTWAVALAFETPLQTPMQ--GCFVQ 206 (336)
T ss_dssp CSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGT-T----CHHHHHHHTTCCEEEEEEEEEEESSCCSCCCC--EEEEC
T ss_pred eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhc-c----CHHHHHHHhhcCccceeEEEEEecCCCCCCCC--eEEeC
Confidence 9999999999997664 999999999988766432 1 23445677888998888999999988875432 33222
Q ss_pred CCCcceeeeccccCC--Cc-eEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHCCC-CCCCcEEEecccCCCCCCCccc
Q 010587 347 TSYGCSYFLNLHKAT--GH-CVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD-ASSPIQYLVSHWGTDANSLGSY 422 (506)
Q Consensus 347 ~~~~~~~~~~~~~~~--~~-~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~-~~~~~~~~~~~w~~~~~~~g~~ 422 (506)
.......+.+...+. +. ..++.+....++..+.+++++++.+.+.+++.++++. ...|......+|.. ..+.+
T Consensus 207 ~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~---a~~~~ 283 (336)
T 1yvv_A 207 DSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLY---ARPAG 283 (336)
T ss_dssp SSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEE---EEESS
T ss_pred CCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCc---cCCCC
Confidence 222222222222221 22 4677777777778888999999999999999999973 44577778888853 12222
Q ss_pred ccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHH
Q 010587 423 SYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 477 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l 477 (506)
.. +.. ....+.++|++|||+++. +++++|+.||.++|+.|++.+
T Consensus 284 ~~---~~~-----~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 284 AH---EWG-----ALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp CC---CCS-----CEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHT
T ss_pred CC---CCC-----eeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 21 110 122355899999999865 799999999999999887764
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.5e-26 Score=229.11 Aligned_cols=245 Identities=15% Similarity=0.220 Sum_probs=157.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeeCCCCCeeEEeecC--CCcEe-ecCCceeeCCCCCCchHHHHHhc
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRDRVGGRVHTDYS--FGFPV-DLGASWLHGVCQENPLAPVISRL 100 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~~~GG~~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~~l~~~l 100 (506)
|.+++||+|||||++||+||++|+++ |++|+|+|+++++||++.|... .|+.+ +.|+++++. .+..+.++++++
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~~ 81 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHT--SNKRVWDYVRQF 81 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEE--SCHHHHHHHTTT
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcC--CcHHHHHHHHHh
Confidence 34579999999999999999999999 9999999999999999999877 68887 499999873 356789999999
Q ss_pred CCCeeecCCCCcc-cccchhhhHHHHHHHHhhhccccceeecCCCCccCHH--HHHHH------HHHHHHHH-HHHHHHh
Q 010587 101 GLPLYRTSGDNSV-LYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQE--LVTKV------GEAFESIL-KETDKVR 170 (506)
Q Consensus 101 gl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~-~~~~~~~ 170 (506)
|+- ........ .+++... .+|.. ....+ .......+ ......
T Consensus 82 g~~--~~~~~~~~~~~~G~~~-------------------------~~p~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~- 133 (399)
T 1v0j_A 82 TDF--TDYRHRVFAMHNGQAY-------------------------QFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEI- 133 (399)
T ss_dssp CCB--CCCCCCEEEEETTEEE-------------------------EESSSHHHHHHHHTSCCCHHHHHHHHHHHGGGS-
T ss_pred hhh--hccccceEEEECCEEE-------------------------eCCCCHHHHHHHhcccCCHHHHHHHHHHHhhcc-
Confidence 872 11111111 1221111 01100 00000 00011111 111111
Q ss_pred hcCCCCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccccc---c-----ccCCCc-cccc
Q 010587 171 EEHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKE---E-----LLPGGH-GLMV 240 (506)
Q Consensus 171 ~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~---~-----~~~~~~-~~~~ 240 (506)
...++.++.+++.+ .+.+.+.+.++.++ .+.++.++.++++...... . .....+ ++++
T Consensus 134 -~~~~~~s~~e~l~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~ 201 (399)
T 1v0j_A 134 -DTADAQNLEEKAIS-----------LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPT 201 (399)
T ss_dssp -CTTC----CCHHHH-----------HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBT
T ss_pred -CCCCcccHHHHHHH-----------HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhccccc
Confidence 12345677777653 35566777777765 5678888888887654210 1 011122 3889
Q ss_pred cchHHHHHHHhc--cCCeeeCCeeEEEEEcCCcEEEEEcCCcEE-EcCEEEEecChhhhhcCcccccCCCChHHHHHHHh
Q 010587 241 RGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTF-VADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDD 317 (506)
Q Consensus 241 ~G~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i-~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~ 317 (506)
+|+++++++|++ |++|++|++|++|+.. | + ++ +||+||+|+|+..+..+ .+..
T Consensus 202 gG~~~l~~~l~~~~g~~I~l~~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~ 257 (399)
T 1v0j_A 202 DGYTAWLQNMAADHRIEVRLNTDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY--------------AEGR 257 (399)
T ss_dssp THHHHHHHHHTCSTTEEEECSCCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT--------------TTCC
T ss_pred ccHHHHHHHHHhcCCeEEEECCchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh--------------hhCC
Confidence 999999999986 5689999999999643 2 1 35 69999999999987543 2345
Q ss_pred cCCccccEEEEEeCCCCC
Q 010587 318 LGVGIENKIIMHFDKVFW 335 (506)
Q Consensus 318 ~~~~~~~~v~~~~~~~~~ 335 (506)
++|.+...+.+.++.+.+
T Consensus 258 l~y~s~~~~~~~~~~~~~ 275 (399)
T 1v0j_A 258 LGWRTLDFEVEVLPIGDF 275 (399)
T ss_dssp CCEEEEEEEEEEESSSCS
T ss_pred CCcceEEEEEEEEccccC
Confidence 677666677777776543
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.93 E-value=3e-25 Score=217.00 Aligned_cols=244 Identities=16% Similarity=0.230 Sum_probs=163.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEee-cCCceeeCCCCCCchHHHHHhcCCCeee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVD-LGASWLHGVCQENPLAPVISRLGLPLYR 106 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d-~G~~~~~~~~~~~~~~~l~~~lgl~~~~ 106 (506)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+....|+.+| .|+++++. .+..+.+++++++... +
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~l~~~~-~ 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHT--NDKYIWDYVNDLVEFN-R 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEE--SCHHHHHHHHTTSCBC-C
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecC--CCHHHHHHHHHhhhhh-h
Confidence 379999999999999999999999999999999999999999888899895 99998874 2356788888887521 1
Q ss_pred cCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCH--HHHHHH-----HHHHHHHHHHHHHHhhcCCCCCCH
Q 010587 107 TSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQ--ELVTKV-----GEAFESILKETDKVREEHDEDMSI 179 (506)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~ 179 (506)
........+.+... .+|. .....+ ...+..++...... ....++.++
T Consensus 78 ~~~~~~~~~~g~~~-------------------------~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~s~ 131 (367)
T 1i8t_A 78 FTNSPLAIYKDKLF-------------------------NLPFNMNTFHQMWGVKDPQEAQNIINAQKKK-YGDKVPENL 131 (367)
T ss_dssp CCCCCEEEETTEEE-------------------------ESSBSHHHHHHHHCCCCHHHHHHHHHHHTTT-TCCCCCCSH
T ss_pred ccccceEEECCeEE-------------------------EcCCCHHHHHHHhccCCHHHHHHHHHHHhhc-cCCCCCccH
Confidence 11111111221111 0110 000000 01111222221111 122456789
Q ss_pred HHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCccccccccccc--cc------ccCCCc-cccccchHHHHHH
Q 010587 180 QRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDK--EE------LLPGGH-GLMVRGYLPVINT 249 (506)
Q Consensus 180 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~--~~------~~~~~~-~~~~~G~~~l~~~ 249 (506)
++++.. .+++++.+.++.++ .+.++.++.++++..... .. ...+.+ +++++|+++++++
T Consensus 132 ~~~~~~-----------~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~ 200 (367)
T 1i8t_A 132 EEQAIS-----------LVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEK 200 (367)
T ss_dssp HHHHHH-----------HHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHH
T ss_pred HHHHHH-----------HHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHH
Confidence 998753 37778888888776 678889999888765521 10 112223 3889999999999
Q ss_pred HhccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccccEEEEE
Q 010587 250 LAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMH 329 (506)
Q Consensus 250 l~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~ 329 (506)
|++|++|++|++|++|+. .| ++.||+||+|+|++.+..+ .+..++|.+...+.+.
T Consensus 201 l~~g~~i~l~~~V~~i~~---~v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~ 255 (367)
T 1i8t_A 201 MLEGVDVKLGIDFLKDKD---SL--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETER 255 (367)
T ss_dssp HHTTSEEECSCCGGGSHH---HH--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEE
T ss_pred HhcCCEEEeCCceeeech---hh--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEE
Confidence 999999999999998863 12 2469999999999886532 2345777777777777
Q ss_pred eCCCCCC
Q 010587 330 FDKVFWP 336 (506)
Q Consensus 330 ~~~~~~~ 336 (506)
++.+.++
T Consensus 256 ~d~~~~~ 262 (367)
T 1i8t_A 256 HEFPNFQ 262 (367)
T ss_dssp ESSSCSS
T ss_pred eccccCC
Confidence 8876554
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.92 E-value=2.5e-24 Score=211.62 Aligned_cols=242 Identities=12% Similarity=0.214 Sum_probs=157.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecC--CCcEe-ecCCceeeCCCCCCchHHHHHhcCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYS--FGFPV-DLGASWLHGVCQENPLAPVISRLGLPL 104 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~~l~~~lgl~~ 104 (506)
++||+|||||++||++|+.|++.|++|+|+|+++++||++.|... .|+.+ |.|+++++. .+..+.+++++++.-
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~l~~~- 79 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT--DNETVWNYVNKHAEM- 79 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEE--SCHHHHHHHHTTSCE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECC--CCHHHHHHHHHHhhh-
Confidence 479999999999999999999999999999999999999999777 78876 999999874 456788999999862
Q ss_pred eecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHH
Q 010587 105 YRTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAIS 184 (506)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 184 (506)
.+......+.+++... ..+.....+. .++ ...+.+. + +..++..... ....++.++.+++.
T Consensus 80 ~~~~~~~~~~~~g~~~-~~P~~~~~~~------~l~---~~~~~~~---~----~~~~l~~~~~--~~~~~~~sl~e~~~ 140 (384)
T 2bi7_A 80 MPYVNRVKATVNGQVF-SLPINLHTIN------QFF---SKTCSPD---E----ARALIAEKGD--STIADPQTFEEEAL 140 (384)
T ss_dssp EECCCCEEEEETTEEE-EESCCHHHHH------HHT---TCCCCHH---H----HHHHHHHHSC--CSCSSCCBHHHHHH
T ss_pred cccccceEEEECCEEE-ECCCChhHHH------HHh---cccCCHH---H----HHHHHHHhhh--ccCCCCcCHHHHHH
Confidence 2221111112222111 0000000000 000 0000111 0 1111111111 01245678999876
Q ss_pred HHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccc-c-------ccccCCCc-cccccchHHHHHHHhc--
Q 010587 185 IVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWD-K-------EELLPGGH-GLMVRGYLPVINTLAK-- 252 (506)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~-~-------~~~~~~~~-~~~~~G~~~l~~~l~~-- 252 (506)
. .+++++.+.++.++ .+.++.++.++++.... . ..++.+.+ +++++|+++++++|++
T Consensus 141 ~-----------~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~ 209 (384)
T 2bi7_A 141 R-----------FIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHE 209 (384)
T ss_dssp H-----------HHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCST
T ss_pred H-----------hhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhcC
Confidence 3 25567777777775 67888898888876542 1 11122333 3889999999999987
Q ss_pred cCCeeeCCeeE-EEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccccEEEEEeC
Q 010587 253 GLDIRLGHRVT-KITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFD 331 (506)
Q Consensus 253 g~~i~~~~~V~-~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~ 331 (506)
|++|++|++|+ +|+. .||+||+|+|++.+..+ .+..++|.+...+.+.++
T Consensus 210 g~~I~l~~~V~~~i~~---------------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 210 NIKVDLQREFIVEERT---------------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp TEEEEESCCCCGGGGG---------------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEEE
T ss_pred CCEEEECCeeehhhhc---------------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEeC
Confidence 67899999999 7753 29999999999987643 133567766666677776
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.91 E-value=5.5e-23 Score=200.60 Aligned_cols=245 Identities=13% Similarity=0.190 Sum_probs=166.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeec-CCCcEe-ecCCceeeCCCCCCchHHHHHhcCC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDY-SFGFPV-DLGASWLHGVCQENPLAPVISRLGL 102 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~-~~g~~~-d~G~~~~~~~~~~~~~~~l~~~lgl 102 (506)
+...+||+|||||++||+||++|++.|.+|+|+|+++++||++.+.. ..|+.+ |.|+|+++. ....+.+++++++.
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~--~~~~~~~~~~~~~~ 103 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHT--NSKDVFEYLSRFTE 103 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEE--SCHHHHHHHHTSCC
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCC--ChHHHHHHHHHhhh
Confidence 45679999999999999999999999999999999999999999876 678864 999999873 45678899999985
Q ss_pred CeeecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHH--HHHHHH------HHHHHHHHHHHHHhhcCC
Q 010587 103 PLYRTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQE--LVTKVG------EAFESILKETDKVREEHD 174 (506)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~ 174 (506)
. .+......+.+.+... ++|.. ....+. .....++. .......
T Consensus 104 ~-~~~~~~~~~~~~g~l~-------------------------~lP~~~~~~~~l~~~~~~~~~~~~~l~---~~~~~~~ 154 (397)
T 3hdq_A 104 W-RPYQHRVLASVDGQLL-------------------------PIPINLDTVNRLYGLNLTSFQVEEFFA---SVAEKVE 154 (397)
T ss_dssp E-EECCCBEEEEETTEEE-------------------------EESCCHHHHHHHHTCCCCHHHHHHHHH---HHCCCCS
T ss_pred c-ccccccceEEECCEEE-------------------------EcCCChHHHHHhhccCCCHHHHHHHHh---hcccCCC
Confidence 2 1111111112222111 11111 111110 01111111 1222345
Q ss_pred CCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhh-hhcccCCcccccccccccc--------cccCCCc-cccccchH
Q 010587 175 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKE--------ELLPGGH-GLMVRGYL 244 (506)
Q Consensus 175 ~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~--------~~~~~~~-~~~~~G~~ 244 (506)
++.++++|+. ..++.++.+.++.++ .+.|+.+++++|+..+... .++.+.+ +++.+|+.
T Consensus 155 ~~~s~~e~~~-----------~~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~ 223 (397)
T 3hdq_A 155 QVRTSEDVVV-----------SKVGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYT 223 (397)
T ss_dssp SCCBHHHHHH-----------HHHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHH
T ss_pred CCcCHHHHHH-----------HhcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHH
Confidence 6789999986 347778888888886 7889999999997654311 1112222 46999999
Q ss_pred HHHHHHhc--cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCcc
Q 010587 245 PVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGI 322 (506)
Q Consensus 245 ~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~ 322 (506)
+++++|++ |++|++|++|+++ +.++.||+||+|+|++.+... .+..+.|.+
T Consensus 224 ~l~e~l~~~~g~~V~l~~~v~~~-------------~~~~~~d~vI~T~P~d~~~~~--------------~~g~L~yrs 276 (397)
T 3hdq_A 224 RMFQNMLSSPNIKVMLNTDYREI-------------ADFIPFQHMIYTGPVDAFFDF--------------CYGKLPYRS 276 (397)
T ss_dssp HHHHHHTCSTTEEEEESCCGGGT-------------TTTSCEEEEEECSCHHHHTTT--------------TTCCCCEEE
T ss_pred HHHHHHHhccCCEEEECCeEEec-------------cccccCCEEEEcCCHHHHHHH--------------hcCCCCCce
Confidence 99999986 7899999999833 335679999999999886421 234567777
Q ss_pred ccEEEEEeCCCCCCCC
Q 010587 323 ENKIIMHFDKVFWPNV 338 (506)
Q Consensus 323 ~~~v~~~~~~~~~~~~ 338 (506)
...+.+.++...+.+.
T Consensus 277 l~~~~~~~~~~~~~~~ 292 (397)
T 3hdq_A 277 LEFRHETHDTEQLLPT 292 (397)
T ss_dssp EEEEEEEESSSCSCSS
T ss_pred EEEEEEEeccccCCCC
Confidence 7777778876554443
No 30
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.86 E-value=3.8e-21 Score=193.64 Aligned_cols=243 Identities=12% Similarity=0.122 Sum_probs=135.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCC-cE---------------eecCCceeeCCC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFG-FP---------------VDLGASWLHGVC 88 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g-~~---------------~d~G~~~~~~~~ 88 (506)
+...+||+|||||++||+||+.|+++|++|+|+|+++++||+++|...+| +. ++.|.+++....
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccc
Confidence 44679999999999999999999999999999999999999999976655 22 344444433221
Q ss_pred -----CCCchHHHHHhcCCCee---ecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHH
Q 010587 89 -----QENPLAPVISRLGLPLY---RTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFE 160 (506)
Q Consensus 89 -----~~~~~~~l~~~lgl~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (506)
....+.++++++|+... .... ..+.+.++.....+....+.. ... ... ..+ ...+.
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~-~~~~~~~g~~~~~p~~~~~~~---------~~~--l~~--~~~--~~~~~ 151 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVS-GSYVFKQGKIYKVPANEIEAI---------SSP--LMG--IFE--KRRMK 151 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECC-CEEEEETTEEEECCSSHHHHH---------HCT--TSC--HHH--HHHHH
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEcc-ceeEEeCCeEEECCCChHHHH---------hhh--ccc--hhh--HHHHH
Confidence 34577899999987521 1111 111111111000000000000 000 000 001 11233
Q ss_pred HHHHHHHHHhhc--------CCCCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhhh--h--cccCCccccccc---c
Q 010587 161 SILKETDKVREE--------HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRME--G--WFAADAETISLK---S 225 (506)
Q Consensus 161 ~~~~~~~~~~~~--------~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~s~~---~ 225 (506)
+++..+.+.... .....++.+++.++. ..+.+.+.+..... . .+...+...++. .
T Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~----------~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~ 221 (453)
T 2bcg_G 152 KFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFG----------LGNSTKEFIGHAMALWTNDDYLQQPARPSFERILL 221 (453)
T ss_dssp HHHHHHHHCBTTBGGGSTTCCTTTSBHHHHHHHTT----------CCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchhhhccccccCCHHHHHHHhC----------CCHHHHHHHHHHHHhccCccccCCchHHHHHHHHH
Confidence 344333332211 134567777765432 22233222211111 0 111112222221 0
Q ss_pred ccc--ccccCCCccccccchHHHHHHHhc-----cCCeeeCCeeEEEEEc--CCcEE-EEEcCCcEEEcCEEEEecChh
Q 010587 226 WDK--EELLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRH--YIGVK-VTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 226 ~~~--~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~--~~~v~-V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+.. ..+..+.+.++.+|++.++++|.+ |++|+++++|++|..+ ++++. |.+ +|+++.||+||+|+++.
T Consensus 222 ~~~s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 222 YCQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp HHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 100 001123344889999999988853 8899999999999988 77764 666 57789999999999875
No 31
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.83 E-value=2.2e-18 Score=162.92 Aligned_cols=59 Identities=32% Similarity=0.549 Sum_probs=54.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLH 85 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~ 85 (506)
|.+||+|||||++||+||+.|+++|++|+||||++++||++++....+..+|+|.+++.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 45899999999999999999999999999999999999999998889999999888663
No 32
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.80 E-value=3e-19 Score=177.48 Aligned_cols=242 Identities=12% Similarity=0.096 Sum_probs=142.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCC--------------------CcEeecCCcee
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSF--------------------GFPVDLGASWL 84 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~--------------------g~~~d~G~~~~ 84 (506)
+.+.+||+|||||++|+++|+.|++.|++|+|+|+++++||++.+.... +|.+|++++.+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 4567999999999999999999999999999999999999999886422 46889998877
Q ss_pred eCCCCCCchHHHHHhcCCCee--ecCCCCccccc---------chhhhHHHHHHHHhhhccccceeecCCCCccCHHHHH
Q 010587 85 HGVCQENPLAPVISRLGLPLY--RTSGDNSVLYD---------HDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVT 153 (506)
Q Consensus 85 ~~~~~~~~~~~l~~~lgl~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (506)
. ....+.+++.+.++.-. .......+.+. .+...-.+....+ .+.. ..+......
T Consensus 97 ~---~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e---------~~~~--~lLs~~eK~ 162 (475)
T 3p1w_A 97 L---VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDME---------ALVS--PLLSLMEKN 162 (475)
T ss_dssp E---TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHH---------HHTC--TTSCHHHHH
T ss_pred e---cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHH---------Hhhc--cCCCHHHHH
Confidence 5 45688999999888521 11111111111 0000000000000 0000 111111111
Q ss_pred HHHHHHHHHHHHHHHHhh--------cCCCCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhhhhcccCCcccccccc
Q 010587 154 KVGEAFESILKETDKVRE--------EHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKS 225 (506)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~--------~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 225 (506)
.+.+++..+..... ....+.++.+++.+ .++.+.+.+.+...+......+....++..
T Consensus 163 ----~l~kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~----------~gls~~l~~fl~~alaL~~~~~~~~~~a~~ 228 (475)
T 3p1w_A 163 ----RCKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKH----------FNLCQLTIDFLGHAVALYLNDDYLKQPAYL 228 (475)
T ss_dssp ----HHHHHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHH----------TTCCHHHHHHHHHHTSCCSSSGGGGSBHHH
T ss_pred ----HHHHHHHHHHhhhhccchhhhcccccCCCHHHHHHH----------cCCCHHHHHHHHHHHHhhcCCCcccCCHHH
Confidence 23344444433211 11246788888654 344455554432222111111111112111
Q ss_pred cc---c------ccccCCCccccccchHHHHHHHhc-----cCCeeeCCeeEEEEE-cCCcE-EEEEcCCcEEEcCEEEE
Q 010587 226 WD---K------EELLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITR-HYIGV-KVTVEGGKTFVADAVVV 289 (506)
Q Consensus 226 ~~---~------~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~-~~~~v-~V~~~~G~~i~ad~VI~ 289 (506)
.. . ..+-.....++.+|++.++++|.+ |++|+++++|++|.. +++++ .|++.+|++++||+||+
T Consensus 229 ~l~ri~~y~~Sl~~yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~ 308 (475)
T 3p1w_A 229 TLERIKLYMQSISAFGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVIC 308 (475)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhcCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEE
Confidence 00 0 001123456899999999998854 899999999999998 66665 58899998999999999
Q ss_pred ecChh
Q 010587 290 AVPLG 294 (506)
Q Consensus 290 a~~~~ 294 (506)
|++..
T Consensus 309 a~~~~ 313 (475)
T 3p1w_A 309 DPSYV 313 (475)
T ss_dssp CGGGC
T ss_pred CCCcc
Confidence 99754
No 33
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.80 E-value=7.1e-19 Score=175.85 Aligned_cols=242 Identities=13% Similarity=0.117 Sum_probs=141.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeec-C--------------------CCcEeecCCce
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDY-S--------------------FGFPVDLGASW 83 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~-~--------------------~g~~~d~G~~~ 83 (506)
|.+.+||+|||||++||+||+.|+++|++|+|+|+++++||+++|.. . .++.+|.|+++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 45679999999999999999999999999999999999999999987 1 34678888887
Q ss_pred eeCCCCCCchHHHHHhcCCCee---ecCCCCcccccchhhhHHHHHHHHhhhccccceeecCCCCccCHHHHHHHHHHHH
Q 010587 84 LHGVCQENPLAPVISRLGLPLY---RTSGDNSVLYDHDLERVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFE 160 (506)
Q Consensus 84 ~~~~~~~~~~~~l~~~lgl~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (506)
+.. ...+.++++++|+... .... ..+.+.++.....+....+.. . ..+. ... -...+.
T Consensus 83 l~~---~~~l~~ll~~lgl~~~l~~~~~~-~~~~~~~g~~~~~p~~~~~~~---------~---~~l~-~~~--~~~~~~ 143 (433)
T 1d5t_A 83 LMA---NGQLVKMLLYTEVTRYLDFKVVE-GSFVYKGGKIYKVPSTETEAL---------A---SNLM-GMF--EKRRFR 143 (433)
T ss_dssp EET---TSHHHHHHHHHTGGGGCCEEECC-EEEEEETTEEEECCCSHHHHH---------H---CSSS-CHH--HHHHHH
T ss_pred eec---cchHHHHHHHcCCccceEEEEeC-ceEEeeCCEEEECCCCHHHHh---------h---Cccc-Chh--hHHHHH
Confidence 763 3578899999997521 1111 111121111000000000000 0 0000 000 011233
Q ss_pred HHHHHHHHHhhc--------CCCCCCHHHHHHHHHccCchhhhhhhHHHHHHHHHHhhhhcccCCcccccc----c---c
Q 010587 161 SILKETDKVREE--------HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISL----K---S 225 (506)
Q Consensus 161 ~~~~~~~~~~~~--------~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----~---~ 225 (506)
+++..+.+.... .....++.+++.++. ..+.+.+.+...+..+.+.++...+. . .
T Consensus 144 ~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~----------~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~ 213 (433)
T 1d5t_A 144 KFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFD----------LGQDVIDFTGHALALYRTDDYLDQPCLETINRIKL 213 (433)
T ss_dssp HHHHHHHHCCTTCGGGGTTCCTTTSBHHHHHHHTT----------CCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHH
T ss_pred HHHHHHHhhcccCchhccccccccCCHHHHHHHcC----------CCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHH
Confidence 333333332110 234668888776432 22233322221111111111111111 1 0
Q ss_pred ccc--ccccCCCccccccchHHHHHHHhc-----cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 226 WDK--EELLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 226 ~~~--~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.. ..+..+...++.+|++.++++|.+ |++|+++++|++|+.+++++.+...+|++++||+||+|+++..
T Consensus 214 ~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 214 YSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 100 001122355889999999988853 8899999999999998888774445788999999999999864
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.78 E-value=1.9e-18 Score=167.05 Aligned_cols=79 Identities=30% Similarity=0.435 Sum_probs=69.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC-CCCCeeEEeec----------CCCcEeecCCceeeCCCCCCchH
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR-DRVGGRVHTDY----------SFGFPVDLGASWLHGVCQENPLA 94 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~-~~~GG~~~s~~----------~~g~~~d~G~~~~~~~~~~~~~~ 94 (506)
...+||+|||||++||+||+.|+++|++|+|||++ +++||++.|.. ..++.+|.|+++++. .+..+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~--~~~~~~ 119 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPS--FHPLTL 119 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEET--TCHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecc--hHHHHH
Confidence 46789999999999999999999999999999999 99999999877 357899999999863 345688
Q ss_pred HHHHhcCCCeee
Q 010587 95 PVISRLGLPLYR 106 (506)
Q Consensus 95 ~l~~~lgl~~~~ 106 (506)
++++++|++...
T Consensus 120 ~~~~~lGl~~~~ 131 (376)
T 2e1m_A 120 ALIDKLGLKRRL 131 (376)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHcCCCcce
Confidence 999999998654
No 35
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.63 E-value=6.6e-16 Score=133.78 Aligned_cols=129 Identities=18% Similarity=0.173 Sum_probs=106.7
Q ss_pred CcceeeeccccC--CCc-eEEEEEeccchhHHhhcCCHHHHHHHHHHHHHHHC-CCCCCCc-EE--EecccCCCCCCCcc
Q 010587 349 YGCSYFLNLHKA--TGH-CVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKIL-PDASSPI-QY--LVSHWGTDANSLGS 421 (506)
Q Consensus 349 ~~~~~~~~~~~~--~~~-~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~-p~~~~~~-~~--~~~~w~~~~~~~g~ 421 (506)
.....+++.... .+. .+|+.++.+..+..+..++++++++.++++|.++| |.+ .+. .+ ..++|..+++..|+
T Consensus 19 pi~~i~d~S~~~~~~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga 97 (181)
T 2e1m_C 19 PNRFMYYPSHPVPGTQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGE 97 (181)
T ss_dssp TTBEEECCSSCCTTCSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSS
T ss_pred CeEEEEECCCCcCCCCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCc
Confidence 344444443322 444 57888888888888999999999999999999999 555 555 56 78999999999999
Q ss_pred cccCCCCCChHHHHHhcCCCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHHHH
Q 010587 422 YSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 479 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~ 479 (506)
|.+..+++...+++.+++|.++|||||++++. +.||||||+.||.+||++|++.+..
T Consensus 98 ~s~~~pg~~~~~~~~l~~p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 98 AAVYTPHQMTAFHLDVVRPEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp EECCCTTHHHHHHHHHHSCBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC-
T ss_pred ccCcCCCchHHHHHHHhCCCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhcc
Confidence 98877888777888999999999999999996 7899999999999999999887654
No 36
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.49 E-value=1e-12 Score=129.87 Aligned_cols=38 Identities=32% Similarity=0.566 Sum_probs=35.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
+|||+|||||++||+||+.|+++|++|+|||+++.+|.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 49999999999999999999999999999999887764
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.47 E-value=4.7e-12 Score=133.82 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=43.3
Q ss_pred HHHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 245 PVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 245 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
.+.+.+. .|++|+++++|++|+.++++|.|++.+|.++.||.||+|++...
T Consensus 422 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 422 NVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 3444443 38999999999999999999999998888999999999999874
No 38
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.46 E-value=1e-12 Score=130.55 Aligned_cols=50 Identities=20% Similarity=0.272 Sum_probs=42.9
Q ss_pred HHHHHhccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhh
Q 010587 246 VINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 246 l~~~l~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
|.+.+.+ ++|+++++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 133 L~~~~~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 133 MLDYWGR-DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHCG-GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred HHHhCCc-CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 3444444 7899999999999999999999999999999999999997653
No 39
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.46 E-value=7.8e-13 Score=135.23 Aligned_cols=57 Identities=14% Similarity=0.097 Sum_probs=48.9
Q ss_pred CCccccccchHHHHHHHhc-----cCCeeeCCeeEEEEEcC--CcEE-EEEcCCcEEEcCEEEEe
Q 010587 234 GGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHY--IGVK-VTVEGGKTFVADAVVVA 290 (506)
Q Consensus 234 ~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~--~~v~-V~~~~G~~i~ad~VI~a 290 (506)
+++.++.||++.|+++|.+ |++|+++++|++|..++ ++++ |.+.+|+++.||+||++
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 4677999999999998854 88999999999999887 6665 66678999999999983
No 40
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.46 E-value=1.6e-12 Score=127.83 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=41.6
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.+.+. .|++|+++++|++|+.+++++.|++.+| +++||+||+|++...
T Consensus 160 l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 160 YLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 444443 3899999999999999888889999888 899999999999764
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.43 E-value=1.3e-11 Score=130.44 Aligned_cols=51 Identities=12% Similarity=0.167 Sum_probs=42.2
Q ss_pred HHHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCc-EEEcCEEEEecChhh
Q 010587 245 PVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLGV 295 (506)
Q Consensus 245 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~-~i~ad~VI~a~~~~~ 295 (506)
.+.+.+. .|++|+++++|++|+.++++|.|.+.+|. +++||.||+|++...
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 3444443 38999999999999999889999998887 899999999999874
No 42
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.42 E-value=2.5e-12 Score=132.23 Aligned_cols=51 Identities=27% Similarity=0.298 Sum_probs=41.5
Q ss_pred HHHHHhc-cCCeeeCCeeEEEEEcCC----cEEEEEcCC---cEEEcCEEEEecChhhh
Q 010587 246 VINTLAK-GLDIRLGHRVTKITRHYI----GVKVTVEGG---KTFVADAVVVAVPLGVL 296 (506)
Q Consensus 246 l~~~l~~-g~~i~~~~~V~~I~~~~~----~v~V~~~~G---~~i~ad~VI~a~~~~~~ 296 (506)
|.+.+.+ |++|+++++|++|+.+++ +|+|++.++ .+++||.||.|.+....
T Consensus 126 L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 126 LLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcch
Confidence 3344433 899999999999999888 888888776 68999999999998653
No 43
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.41 E-value=1.9e-12 Score=133.51 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=34.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
.+||+|||||++||++|+.|++.|++|+|+|+.+.++
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 5899999999999999999999999999999976544
No 44
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=1.6e-12 Score=127.15 Aligned_cols=41 Identities=37% Similarity=0.574 Sum_probs=37.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++|++||++|++.|++|+|+|+++.+|+.+
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~ 43 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGT 43 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCST
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcc
Confidence 46899999999999999999999999999999987777654
No 45
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.40 E-value=1.4e-11 Score=121.19 Aligned_cols=49 Identities=16% Similarity=0.031 Sum_probs=40.9
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCcEE-EEEcCCcEEEcCEEEEecChhh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.+.+. .|++|+++++|++|+.+++++. |++.+| +++||.||+|++...
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 334333 3899999999999999888887 888888 899999999999764
No 46
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.39 E-value=1.6e-10 Score=114.21 Aligned_cols=50 Identities=30% Similarity=0.377 Sum_probs=41.1
Q ss_pred HHHHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 244 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 244 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
..+.+.+. .|++|+++++|++|+.+++++.|.+.+| +++||.||+|++..
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 34444443 4899999999999999888888888777 89999999999875
No 47
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.39 E-value=2.8e-12 Score=126.16 Aligned_cols=49 Identities=20% Similarity=0.166 Sum_probs=40.8
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.+.+. .|++|+++++|++|+.+++++.|++.+| +++||.||+|++...
T Consensus 170 l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 170 YVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 444443 3899999999999999888888888888 899999999999753
No 48
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.38 E-value=1.2e-11 Score=127.32 Aligned_cols=44 Identities=30% Similarity=0.246 Sum_probs=39.0
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEE--cCC-cEEEcCEEEEecChhhh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTV--EGG-KTFVADAVVVAVPLGVL 296 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~--~~G-~~i~ad~VI~a~~~~~~ 296 (506)
|++|+++++|++|+.++++++|++ .+| ++++||.||.|.+....
T Consensus 162 gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~ 208 (570)
T 3fmw_A 162 GAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRST 208 (570)
T ss_dssp TEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCH
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCch
Confidence 889999999999999988888877 678 68999999999997653
No 49
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.38 E-value=4.1e-11 Score=121.68 Aligned_cols=45 Identities=36% Similarity=0.341 Sum_probs=39.6
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCc---EEEcCEEEEecChhhhh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLGVLK 297 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~---~i~ad~VI~a~~~~~~~ 297 (506)
|++|+++++|++|+.++++|+|++.+|. +++||.||.|.+.....
T Consensus 120 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~V 167 (500)
T 2qa1_A 120 GADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSV 167 (500)
T ss_dssp TCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHH
T ss_pred CCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHH
Confidence 8899999999999999899988887775 79999999999986543
No 50
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.38 E-value=7.9e-12 Score=124.68 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=37.2
Q ss_pred cCCeeeCCeeEEEEEcCCcE--EEEEcCCc--EEEcCEEEEecChhh
Q 010587 253 GLDIRLGHRVTKITRHYIGV--KVTVEGGK--TFVADAVVVAVPLGV 295 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v--~V~~~~G~--~i~ad~VI~a~~~~~ 295 (506)
|++|+++++|++|+.+++++ .|.+.+|+ +++||.||.|++...
T Consensus 120 gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 120 GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 89999999999999887764 56678887 699999999999764
No 51
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.37 E-value=3.3e-11 Score=119.10 Aligned_cols=38 Identities=32% Similarity=0.566 Sum_probs=35.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
++||+|||||++||++|+.|++.|++|+|+|+++.+|+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 48999999999999999999999999999999887765
No 52
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.36 E-value=1.8e-12 Score=128.10 Aligned_cols=42 Identities=26% Similarity=0.476 Sum_probs=37.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
.+++||+|||||++||+||+.|++.|.+|+|+|+++.+|+.+
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKI 66 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCcee
Confidence 456899999999999999999999999999999999988764
No 53
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.35 E-value=4.5e-12 Score=127.12 Aligned_cols=52 Identities=17% Similarity=0.203 Sum_probs=43.6
Q ss_pred HHHHHHh-ccCCeeeCC---eeEEEEEcCCcEE-EEEcCCcEEEcCEEEEecChhhh
Q 010587 245 PVINTLA-KGLDIRLGH---RVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 245 ~l~~~l~-~g~~i~~~~---~V~~I~~~~~~v~-V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
.+.+.+. .|++|++++ +|++|+.+++++. |++.+|++++||.||+|++....
T Consensus 166 ~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 166 AAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3444443 399999999 9999999888888 99999988999999999998653
No 54
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.34 E-value=5.3e-11 Score=120.83 Aligned_cols=45 Identities=27% Similarity=0.203 Sum_probs=39.8
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCc---EEEcCEEEEecChhhhh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLGVLK 297 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~---~i~ad~VI~a~~~~~~~ 297 (506)
|++|+++++|++|+.++++|+|++.+|. +++||.||.|.+.....
T Consensus 121 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 121 GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp TCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHH
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHH
Confidence 8899999999999999889999888775 79999999999986543
No 55
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.32 E-value=1.6e-11 Score=125.31 Aligned_cols=36 Identities=31% Similarity=0.371 Sum_probs=33.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
+++||+|||||++||++|+.|++.|++|+|+|+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~ 41 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCC
Confidence 358999999999999999999999999999999764
No 56
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.31 E-value=4.2e-11 Score=118.90 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=41.7
Q ss_pred HHHHHhc--cCCeeeCCeeEEEEEcC-CcEEEEEcCCcEEEcCEEEEecChhhhh
Q 010587 246 VINTLAK--GLDIRLGHRVTKITRHY-IGVKVTVEGGKTFVADAVVVAVPLGVLK 297 (506)
Q Consensus 246 l~~~l~~--g~~i~~~~~V~~I~~~~-~~v~V~~~~G~~i~ad~VI~a~~~~~~~ 297 (506)
|.+.|.+ +.+|+++++|++++..+ ++++|+++||++++||.||-|-+.....
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 168 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKV 168 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcch
Confidence 4444544 34799999999998754 4689999999999999999999976543
No 57
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.27 E-value=7.7e-11 Score=118.51 Aligned_cols=37 Identities=32% Similarity=0.524 Sum_probs=34.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
+++||+|||||++||+||+.|++.|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3589999999999999999999999999999997754
No 58
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.21 E-value=5.7e-11 Score=117.32 Aligned_cols=52 Identities=10% Similarity=0.036 Sum_probs=40.6
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcC-CcEEEEE-cCCc--EEEcCEEEEecChhhhh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHY-IGVKVTV-EGGK--TFVADAVVVAVPLGVLK 297 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~-~~v~V~~-~~G~--~i~ad~VI~a~~~~~~~ 297 (506)
+.+.+. .|++|+++++|++|+.++ +.+.|++ .+|+ +++||.||.|.+.....
T Consensus 109 L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 109 LMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHH
Confidence 344433 388999999999998864 5677877 7887 79999999999986543
No 59
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.20 E-value=9.5e-11 Score=121.07 Aligned_cols=42 Identities=33% Similarity=0.531 Sum_probs=38.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
....+||+|||||++||+||+.|++.|.+|+|||+.+.+||.
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~ 159 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGN 159 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 346789999999999999999999999999999999988875
No 60
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.20 E-value=8.9e-11 Score=114.95 Aligned_cols=50 Identities=22% Similarity=0.222 Sum_probs=41.6
Q ss_pred HHHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 245 PVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 245 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
.+.+.+. .|++|+.+++|++|+.+++++.|++.+| +++||.||+|++...
T Consensus 154 ~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 154 TWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 3444443 3899999999999999888888998888 699999999999764
No 61
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.19 E-value=1.4e-10 Score=114.63 Aligned_cols=45 Identities=11% Similarity=0.011 Sum_probs=41.2
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
.|++|+++++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 488999999999999988899999999989999999999997654
No 62
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.19 E-value=1.4e-10 Score=120.02 Aligned_cols=42 Identities=36% Similarity=0.585 Sum_probs=38.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
...+||+|||||++||+||+.|++.|.+|+|||+.+.+||.+
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCch
Confidence 356999999999999999999999999999999999988753
No 63
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.19 E-value=1.6e-10 Score=117.84 Aligned_cols=41 Identities=37% Similarity=0.490 Sum_probs=38.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
..+||+|||||++||+||+.|++.|.+|+|+||.+.+||.+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 46899999999999999999999999999999999999864
No 64
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.19 E-value=5.1e-10 Score=115.74 Aligned_cols=41 Identities=34% Similarity=0.639 Sum_probs=37.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEeeCCCCCee
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDA------SFKVVLLESRDRVGGR 66 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~------G~~V~vlE~~~~~GG~ 66 (506)
.+.+||+|||||++||+||+.|++. |++|+|||+.+.+|+.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 3468999999999999999999998 9999999999888764
No 65
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.18 E-value=8.7e-11 Score=120.33 Aligned_cols=53 Identities=30% Similarity=0.396 Sum_probs=45.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCCcEeec
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDL 79 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~ 79 (506)
+++||+|||||++|++||+.|++.|++|+|+|+++.+||.+......|+..|.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv 72 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDV 72 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCC
Confidence 46899999999999999999999999999999999999976544445554444
No 66
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.18 E-value=6e-11 Score=116.84 Aligned_cols=40 Identities=28% Similarity=0.503 Sum_probs=36.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++||+||+.|++.|.+|+|+|+++.+|+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhc
Confidence 4899999999999999999999999999999998886543
No 67
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.18 E-value=2.2e-10 Score=113.24 Aligned_cols=45 Identities=13% Similarity=-0.018 Sum_probs=40.1
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhhhh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLK 297 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~~~ 297 (506)
+++|+++++|++|+.++++++|++.+|++++||.||.|.+.....
T Consensus 140 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKV 184 (398)
T ss_dssp TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSC
T ss_pred CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhH
Confidence 468999999999999888899999999889999999999986543
No 68
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.17 E-value=2.3e-10 Score=112.71 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=40.6
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.+.+. .|++|+++++|++|+.+++++.|++.+| +++||.||+|++...
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 156 YRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 444443 3899999999999999888888888777 799999999999754
No 69
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.16 E-value=1.4e-10 Score=119.12 Aligned_cols=43 Identities=30% Similarity=0.430 Sum_probs=39.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEe
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHT 69 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s 69 (506)
..+||+|||||++||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 4689999999999999999999999999999999999987643
No 70
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.16 E-value=3.3e-11 Score=119.46 Aligned_cols=49 Identities=22% Similarity=0.133 Sum_probs=39.6
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCc-EEEEEcCCcEEEcCEEEEecChhh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.+.+. .|++|+++++|++|+.++++ +.|++.+| +++||.||+|++...
T Consensus 180 l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 180 FARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 444443 38999999999999988776 45888888 799999999999754
No 71
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.16 E-value=7.6e-11 Score=118.22 Aligned_cols=41 Identities=34% Similarity=0.532 Sum_probs=37.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
.+++||+|||||++||+||+.|++.|.+|+|+|+.+.+|+.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~ 64 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRK 64 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCce
Confidence 35689999999999999999999999999999999888764
No 72
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.15 E-value=1.3e-10 Score=118.90 Aligned_cols=53 Identities=28% Similarity=0.392 Sum_probs=44.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHH-HCCCcEEEEeeCCCCCeeEEeecCCCcEeec
Q 010587 27 RSPSVIVIGAGMAGVAAARALH-DASFKVVLLESRDRVGGRVHTDYSFGFPVDL 79 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~-~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~ 79 (506)
+++||+|||||++||+||+.|+ +.|++|+|+|+++.+||.+......|+..|.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~ 60 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDT 60 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecC
Confidence 3589999999999999999999 8999999999999999976555555555544
No 73
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.14 E-value=1.7e-09 Score=111.25 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=34.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
++||+|||||++||++|+.|++.|++|+|||+++.++
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4799999999999999999999999999999987665
No 74
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.14 E-value=2e-10 Score=118.14 Aligned_cols=41 Identities=24% Similarity=0.391 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
..+||+|||||++|+++|+.|++.|++|+|+|+++..||..
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 46999999999999999999999999999999998777653
No 75
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.13 E-value=1.9e-10 Score=110.78 Aligned_cols=41 Identities=20% Similarity=0.378 Sum_probs=38.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 45899999999999999999999999999999999888764
No 76
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.12 E-value=1e-10 Score=119.65 Aligned_cols=48 Identities=31% Similarity=0.443 Sum_probs=41.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEeecCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFG 74 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g 74 (506)
+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+.....+|
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg 55 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPG 55 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTT
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCc
Confidence 468999999999999999999999999999999999998754333333
No 77
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.11 E-value=1.8e-10 Score=117.06 Aligned_cols=42 Identities=29% Similarity=0.405 Sum_probs=38.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
...+||+|||||++||+||+.|++.|++|+|+|+.+.++++.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~ 146 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT 146 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc
Confidence 345899999999999999999999999999999998887754
No 78
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.10 E-value=2.1e-10 Score=113.45 Aligned_cols=51 Identities=16% Similarity=0.282 Sum_probs=43.3
Q ss_pred HHHHHhc--cCCeeeCCeeEEEEEcCCcE--EEEEcCCcEEEcCEEEEecChhhh
Q 010587 246 VINTLAK--GLDIRLGHRVTKITRHYIGV--KVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 246 l~~~l~~--g~~i~~~~~V~~I~~~~~~v--~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
+.+.+.+ |++|+++++|++|+.+++++ .|++.+|++++||.||.|++....
T Consensus 113 L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 113 VLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 4455544 78999999999999988888 899999989999999999997553
No 79
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.10 E-value=3.2e-10 Score=110.42 Aligned_cols=42 Identities=24% Similarity=0.388 Sum_probs=38.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
.+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 346899999999999999999999999999999999998865
No 80
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.09 E-value=2.8e-10 Score=110.50 Aligned_cols=40 Identities=33% Similarity=0.549 Sum_probs=37.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++||++|+.|++.|++|+|+|+++.+||.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~ 42 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW 42 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 4799999999999999999999999999999999999864
No 81
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.08 E-value=2.5e-10 Score=107.05 Aligned_cols=40 Identities=33% Similarity=0.564 Sum_probs=36.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeeCCCCCee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRDRVGGR 66 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~~~GG~ 66 (506)
.++||+|||||++||+||+.|++. |.+|+|+|+++.+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 358999999999999999999997 9999999999988864
No 82
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.08 E-value=1.4e-08 Score=103.32 Aligned_cols=38 Identities=29% Similarity=0.507 Sum_probs=34.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
.+||+|||||++|+++|+.|++.|++|+|+|+++..+|
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 58999999999999999999999999999999765444
No 83
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.07 E-value=2.9e-10 Score=109.31 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=37.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 5899999999999999999999999999999999999865
No 84
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.07 E-value=1.7e-09 Score=113.16 Aligned_cols=38 Identities=21% Similarity=0.432 Sum_probs=34.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEeeCCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~G 64 (506)
.++||+|||||++||++|+.|++ .|++|+|||+++.++
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45899999999999999999999 999999999987553
No 85
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.05 E-value=9.2e-10 Score=105.28 Aligned_cols=41 Identities=22% Similarity=0.247 Sum_probs=35.5
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
|+++++ ++|++|+.+++.+.|.+.+|.++.+|+||+|++..
T Consensus 84 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 84 EVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp TCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 788888 99999999888899999998899999999999865
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.04 E-value=1.4e-09 Score=109.14 Aligned_cols=41 Identities=34% Similarity=0.511 Sum_probs=38.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~~~GG~~ 67 (506)
+.+||+|||||++||+||..|++.|. +|+|||+++.+||.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW 47 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee
Confidence 46899999999999999999999999 999999999999865
No 87
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.03 E-value=1.5e-09 Score=117.30 Aligned_cols=50 Identities=26% Similarity=0.190 Sum_probs=40.6
Q ss_pred HHHHHHh-ccCCeeeCCeeEEEEEcCCcE-EEEEcCCcEEEcCEEEEecChhh
Q 010587 245 PVINTLA-KGLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 245 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
.+.+.+. .|++|+++++|++|+.+++++ .|.+.+| +++||.||+|++...
T Consensus 156 ~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 156 LLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 3444443 389999999999999988876 4888888 899999999999865
No 88
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.01 E-value=1.3e-09 Score=112.47 Aligned_cols=41 Identities=44% Similarity=0.643 Sum_probs=38.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
..+||+|||||++||+||+.|++.|.+|+|+|+.+.+||.+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 46899999999999999999999999999999999998764
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.00 E-value=6.2e-10 Score=107.27 Aligned_cols=43 Identities=33% Similarity=0.390 Sum_probs=36.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC----CCCeeE
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD----RVGGRV 67 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~----~~GG~~ 67 (506)
..+++||+|||||++||+||+.|++.|++|+|+|+++ .+||.+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~ 65 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQL 65 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccc
Confidence 4567999999999999999999999999999999944 677643
No 90
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.98 E-value=6.2e-10 Score=111.83 Aligned_cols=38 Identities=32% Similarity=0.402 Sum_probs=34.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG 65 (506)
++||+|||||++|+++|++|++.| .+|+|+|+++.+|+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 589999999999999999999999 99999999555553
No 91
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.98 E-value=1.1e-09 Score=103.81 Aligned_cols=41 Identities=24% Similarity=0.538 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG~~ 67 (506)
..+||+|||||++||+||+.|++. |++|+|+|+++.+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 368999999999999999999997 99999999998888743
No 92
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.97 E-value=2.3e-09 Score=106.35 Aligned_cols=38 Identities=37% Similarity=0.629 Sum_probs=34.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc-EEEEeeCCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFK-VVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~-V~vlE~~~~~G 64 (506)
+++||+|||||++||++|+.|++.|++ |+|||+++.++
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 458999999999999999999999999 99999987664
No 93
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.97 E-value=2.3e-09 Score=105.14 Aligned_cols=38 Identities=32% Similarity=0.447 Sum_probs=35.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
.+||+|||||++||++|+.|++.|++|+|+|+++.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 58999999999999999999999999999999887654
No 94
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.96 E-value=4.2e-09 Score=99.86 Aligned_cols=39 Identities=31% Similarity=0.410 Sum_probs=34.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
+.|||+|||||++||+||++|+++|++|+|+|++ .+||.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~ 43 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNR 43 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCe
Confidence 3589999999999999999999999999999984 56664
No 95
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.95 E-value=3.9e-09 Score=106.90 Aligned_cols=49 Identities=22% Similarity=0.304 Sum_probs=42.0
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+.+.+. .|++|+++++|++|+.+++++.|++.+|+++.+|.||+|++..
T Consensus 238 l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 238 LNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 344444 3999999999999999888899999999899999999999864
No 96
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.92 E-value=5.9e-11 Score=94.99 Aligned_cols=108 Identities=18% Similarity=0.225 Sum_probs=67.8
Q ss_pred cEEEcCEEEEecChhhhhcCcccccCCCChHHHHHHHhcCCccccEEEEEeCCCCCCCCCcceeecCCCCcceeeecccc
Q 010587 280 KTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHK 359 (506)
Q Consensus 280 ~~i~ad~VI~a~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 359 (506)
++++||+||+|+|+..+. .+.|.|+||+...+++..++++...|+++.|+.+||++....|. +...
T Consensus 4 ~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd------------~s~~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK------------RELD 69 (130)
T ss_dssp EEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH------------HHHH
T ss_pred eEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc------------ccCC
Confidence 378999999999999987 57899999999999999999999999999999999987643221 1111
Q ss_pred CCCceEEEEEe-ccchhHHhhcCCHHHHHHHHHHHHHHHCCCCC
Q 010587 360 ATGHCVLVYMP-AGQLARDIEKMSDEAAANFAFTQLKKILPDAS 402 (506)
Q Consensus 360 ~~~~~~l~~~~-~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~ 402 (506)
+.+..+++.++ ++..+..|..+++ +..+.++..|.+++|++.
T Consensus 70 ~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~ 112 (130)
T 2e1m_B 70 AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVD 112 (130)
T ss_dssp HHSTTHHHHHHHHCCCSCCCC-----------------------
T ss_pred CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCc
Confidence 22334667777 4777777888765 788899999999999755
No 97
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.91 E-value=5.7e-09 Score=99.24 Aligned_cols=41 Identities=27% Similarity=0.416 Sum_probs=35.7
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
|+++++ ++|++|+.+++.+.|++.+|+++.||+||+|++..
T Consensus 73 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 73 GLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp SCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCC
Confidence 677877 78999998888888888888899999999999953
No 98
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.90 E-value=2e-08 Score=103.94 Aligned_cols=40 Identities=28% Similarity=0.347 Sum_probs=35.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
..+||+|||||++||+||+.|++.|.+|+|+|+....||.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 3589999999999999999999999999999997765553
No 99
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.90 E-value=4.9e-09 Score=99.88 Aligned_cols=41 Identities=34% Similarity=0.414 Sum_probs=35.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
|...|||+|||||+|||+||.+|++.|++|+|+|+. ..||.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~-~~gg~ 41 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF-MAGGV 41 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-SGGGC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCc
Confidence 456799999999999999999999999999999985 44543
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.89 E-value=1.1e-08 Score=88.93 Aligned_cols=40 Identities=20% Similarity=0.217 Sum_probs=36.4
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
|++++++ +|++|+.+++++.|++.+| ++++|.||+|++..
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 8899999 9999998888888999888 89999999999964
No 101
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.88 E-value=2.5e-08 Score=103.01 Aligned_cols=40 Identities=30% Similarity=0.336 Sum_probs=36.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
..+||+|||||++||+||+.|++.|.+|+|+||.+..||.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence 3589999999999999999999999999999998776553
No 102
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.88 E-value=2.3e-08 Score=104.21 Aligned_cols=39 Identities=26% Similarity=0.341 Sum_probs=35.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
.+||+|||||++||+||+.|++.|.+|+|+||....+|.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 589999999999999999999999999999998765543
No 103
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.87 E-value=1.1e-08 Score=102.96 Aligned_cols=41 Identities=27% Similarity=0.516 Sum_probs=37.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHH---CCCc---EEEEeeCCCCCeeEE
Q 010587 28 SPSVIVIGAGMAGVAAARALHD---ASFK---VVLLESRDRVGGRVH 68 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~---~G~~---V~vlE~~~~~GG~~~ 68 (506)
.+||+|||||++||+||..|++ .|++ |+|||+++.+||.+.
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 3799999999999999999999 9999 999999999998754
No 104
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.87 E-value=7.3e-09 Score=99.23 Aligned_cols=41 Identities=34% Similarity=0.527 Sum_probs=37.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
.+++||+|||||++||+||+.|++.|++|+|+|++ .+||.+
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 34689999999999999999999999999999997 688754
No 105
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.87 E-value=5.4e-08 Score=102.04 Aligned_cols=35 Identities=37% Similarity=0.649 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-----CCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHD-----ASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~-----~G~~V~vlE~~~~ 62 (506)
++||+|||||++||++|..|++ .|++|+|||+++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5899999999999999999999 9999999999754
No 106
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.86 E-value=5.6e-09 Score=98.27 Aligned_cols=40 Identities=35% Similarity=0.582 Sum_probs=36.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG~~ 67 (506)
.+||+|||||++||+||+.|++. |++|+|+|+++.+||.+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 46999999999999999999998 99999999999998743
No 107
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.86 E-value=1.3e-08 Score=104.13 Aligned_cols=39 Identities=33% Similarity=0.526 Sum_probs=34.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
..+||+|||||++||+||+.|++ |.+|+|+||.+..||.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 35899999999999999999999 9999999998877764
No 108
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.86 E-value=1.3e-08 Score=102.43 Aligned_cols=41 Identities=34% Similarity=0.553 Sum_probs=38.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++||+||..|++.|++|+|+|+++.+||.|
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~ 43 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNC 43 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcc
Confidence 46899999999999999999999999999999989999875
No 109
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.86 E-value=4.4e-09 Score=106.64 Aligned_cols=40 Identities=33% Similarity=0.444 Sum_probs=36.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4579999999999999999999999999999999888764
No 110
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.86 E-value=1.6e-08 Score=95.27 Aligned_cols=35 Identities=34% Similarity=0.532 Sum_probs=32.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
++||+|||||++||+||+.|++.|++|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 58999999999999999999999999999999653
No 111
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.86 E-value=5.1e-09 Score=102.20 Aligned_cols=42 Identities=24% Similarity=0.116 Sum_probs=37.5
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
|++++++++|++|+.+++++.|.+.+| ++.||+||+|++...
T Consensus 102 gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 102 ELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred CCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 889999999999999887889988887 699999999999753
No 112
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.85 E-value=7.4e-09 Score=99.65 Aligned_cols=40 Identities=35% Similarity=0.455 Sum_probs=35.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
.+++||+|||||++||+||+.|++.|++|+|+|++ .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 45689999999999999999999999999999974 67764
No 113
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.84 E-value=3.8e-08 Score=101.38 Aligned_cols=39 Identities=26% Similarity=0.452 Sum_probs=35.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
..+||+|||||++|+++|+.|++.|++|+|+|+++..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 369999999999999999999999999999999876555
No 114
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.83 E-value=1e-08 Score=97.92 Aligned_cols=42 Identities=33% Similarity=0.556 Sum_probs=37.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+.+++||+|||||++|++||+.|++.|++|+|+|+ ..+||.+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 55678999999999999999999999999999999 5678754
No 115
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.82 E-value=1.5e-09 Score=104.05 Aligned_cols=68 Identities=28% Similarity=0.402 Sum_probs=50.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCcEEEEeeCCCCCeeEEeecCCCcEeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010587 28 SPSVIVIGAGMAGVAAARALHD--ASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~--~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lgl~~~ 105 (506)
.+||+|||||++||+||++|++ .|++|+|||+++.+||.+.. .++.+. ... -...+..+++++|++..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~---~~~~~~--~~~-----l~~~~~~~~~e~Gv~~~ 134 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL---GGQLFS--AMV-----MRKPAHLFLQELEIPYE 134 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC---CSTTCC--CEE-----EETTTHHHHHHTTCCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe---CCccCC--HHH-----HHHHHHHHHHHcCCEEE
Confidence 5799999999999999999985 59999999999999997642 122111 011 12356677888888743
No 116
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.80 E-value=2.2e-08 Score=90.79 Aligned_cols=42 Identities=21% Similarity=0.051 Sum_probs=35.6
Q ss_pred cCCeeeCCeeEEEEEcCCcE-EEEEcCCcEEEcCEEEEecChhh
Q 010587 253 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
|++++ +++|++|+.+++++ .|.+.+|++++||.||.|++...
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 67888 67999999888775 58888888899999999999854
No 117
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.80 E-value=1.1e-08 Score=103.06 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=35.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-----CcEEEEeeCCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS-----FKVVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-----~~V~vlE~~~~~G 64 (506)
+.+||+|||||++||+||..|++.| .+|+|||+++.+|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4689999999999999999999999 9999999999887
No 118
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.79 E-value=1.2e-08 Score=97.36 Aligned_cols=40 Identities=28% Similarity=0.500 Sum_probs=35.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++||+||+.|++.|++|+|+|+ +.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 43 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQL 43 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceE
Confidence 468999999999999999999999999999997 5677753
No 119
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.78 E-value=3.9e-08 Score=97.53 Aligned_cols=43 Identities=28% Similarity=0.420 Sum_probs=38.5
Q ss_pred ccCCeeeCCeeEEEEEcCCcE-EEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++|+++++|++|+.+++++ .|++.+|+++.||.||+|++..
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 399999999999999887777 5889999999999999999864
No 120
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.78 E-value=3.2e-08 Score=99.60 Aligned_cols=36 Identities=42% Similarity=0.649 Sum_probs=33.0
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCee
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (506)
||+|||||++||+||+.|++.|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 7999999999999999999999999999998 55553
No 121
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.76 E-value=7.3e-08 Score=99.71 Aligned_cols=38 Identities=29% Similarity=0.387 Sum_probs=34.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~~GG 65 (506)
.+||+|||||++||+||+.|++.| .+|+|+|+....+|
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~ 44 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS 44 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCC
Confidence 589999999999999999999999 99999999876655
No 122
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.75 E-value=1.5e-08 Score=97.42 Aligned_cols=40 Identities=30% Similarity=0.286 Sum_probs=35.0
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
|++++.++ |++|+.+++.++|++ +|.++++|+||+|++..
T Consensus 84 gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 84 GTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp TCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 78898887 999998888888887 77789999999999965
No 123
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.74 E-value=2.4e-08 Score=94.92 Aligned_cols=40 Identities=30% Similarity=0.459 Sum_probs=36.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEE-EeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVL-LESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~v-lE~~~~~GG~~ 67 (506)
+++||+|||||++||+||+.|++.|++|+| +|+ +.+||.+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~ 43 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQI 43 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCcee
Confidence 568999999999999999999999999999 999 7788864
No 124
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.74 E-value=4.9e-08 Score=98.52 Aligned_cols=42 Identities=31% Similarity=0.524 Sum_probs=38.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
..++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 357999999999999999999999999999999988898864
No 125
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.72 E-value=3.8e-08 Score=100.75 Aligned_cols=41 Identities=34% Similarity=0.422 Sum_probs=35.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC-CCCe
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD-RVGG 65 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~-~~GG 65 (506)
....+||+|||||++|++||+.|++.|.+|+|+|++. .+|+
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 3457999999999999999999999999999999974 4554
No 126
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.72 E-value=3.6e-08 Score=99.76 Aligned_cols=43 Identities=33% Similarity=0.488 Sum_probs=39.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
|..++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 3446899999999999999999999999999999988899854
No 127
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.72 E-value=4.3e-08 Score=100.04 Aligned_cols=48 Identities=23% Similarity=0.137 Sum_probs=38.9
Q ss_pred HHHHHhc--cCCeeeCCeeEEEEEcCCcEE-EEEcCCcEEEcCEEEEecChh
Q 010587 246 VINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 246 l~~~l~~--g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+.+.+.+ |++| ++++|++|..+++++. |.+.+|.++.||.||+|++..
T Consensus 129 L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 129 MKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 4444443 7888 6789999998888764 888999899999999999964
No 128
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.71 E-value=1.8e-08 Score=101.93 Aligned_cols=41 Identities=34% Similarity=0.582 Sum_probs=38.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 45899999999999999999999999999999988898854
No 129
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.71 E-value=6.9e-09 Score=98.78 Aligned_cols=42 Identities=33% Similarity=0.501 Sum_probs=36.8
Q ss_pred CCC-CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 25 QAR-SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 25 ~~~-~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
|++ +|||+|||||++||+||.+|++.|++|+|+|+ +.+||.|
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~ 44 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQM 44 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCee
Confidence 443 69999999999999999999999999999998 6788865
No 130
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.71 E-value=4.1e-08 Score=93.25 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=36.0
Q ss_pred cCCeeeCCeeEEEEEcC---CcEEEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~---~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
|++++.+++|+.|+.+. +.+.|++.+|+++.||+||+|++..
T Consensus 70 ~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 70 DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 77899999999998653 3688999889889999999999964
No 131
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.70 E-value=4e-08 Score=100.68 Aligned_cols=49 Identities=27% Similarity=0.232 Sum_probs=39.0
Q ss_pred HHHHHhc--cCCeeeCCeeEEEEEcCCcE-EEEEcCCcEEEcCEEEEecChhh
Q 010587 246 VINTLAK--GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 246 l~~~l~~--g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.+.+.+ |++| ++++|+.|..+++++ .|.+.+|.++.||.||+|++...
T Consensus 130 L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 130 VRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 3444443 7888 678999999887776 58888898899999999999754
No 132
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.70 E-value=8.8e-08 Score=98.33 Aligned_cols=44 Identities=18% Similarity=0.297 Sum_probs=36.7
Q ss_pred ccCCeeeCCeeEEEEEcCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 010587 252 KGLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
.|++++.+ +|++|+.++++ +.|++.+|++++||.||.|++....
T Consensus 178 ~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp TTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred CCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 38999999 89999886543 4688888888999999999998654
No 133
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.69 E-value=5.3e-08 Score=99.36 Aligned_cols=44 Identities=16% Similarity=0.164 Sum_probs=37.2
Q ss_pred ccCCeeeCCeeEEEEEcCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 010587 252 KGLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
.|++++.+ +|++|+.++++ +.|++.+|++++||.||.|++....
T Consensus 186 ~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 186 RGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp TTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred CCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 38999999 99999985544 5688888988999999999998653
No 134
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.69 E-value=3.8e-07 Score=95.28 Aligned_cols=36 Identities=28% Similarity=0.491 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHH---H-CCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALH---D-ASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~---~-~G~~V~vlE~~~~ 62 (506)
..+||+|||||++||+||+.|+ + .|.+|+|+||.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4589999999999999999999 6 8999999999765
No 135
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.68 E-value=1.2e-07 Score=93.51 Aligned_cols=43 Identities=33% Similarity=0.415 Sum_probs=38.3
Q ss_pred ccCCeeeCCeeEEEEEcCCcEE-EEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++. |++.+|+++.||.||+|++..
T Consensus 197 ~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 197 AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 3899999999999998877764 889999999999999999864
No 136
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.66 E-value=7.3e-08 Score=98.28 Aligned_cols=39 Identities=33% Similarity=0.521 Sum_probs=35.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
..+||+|||||++|++||+.|++.|++|+|+|+ ++||.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~ 249 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQV 249 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGG
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcc
Confidence 579999999999999999999999999999985 567753
No 137
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=9.4e-08 Score=95.97 Aligned_cols=40 Identities=30% Similarity=0.428 Sum_probs=36.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
.++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 3589999999999999999999999999999997 788864
No 138
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.65 E-value=1.2e-07 Score=97.42 Aligned_cols=50 Identities=26% Similarity=0.265 Sum_probs=39.5
Q ss_pred HHHHHh-c-cCCeeeCCeeEEEEEcCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 010587 246 VINTLA-K-GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 246 l~~~l~-~-g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
|.+.+. . |++++++ +|++|+.++++ +.|++.+|++++||.||.|++....
T Consensus 200 L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 200 LRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 344443 3 8999999 99999886544 5688888988999999999998653
No 139
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.63 E-value=9.9e-08 Score=99.09 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=35.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (506)
.+++||+|||||++||+||+.|++. |.+|+|+|+++.+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4568999999999999999999998 89999999988654
No 140
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.61 E-value=8.4e-08 Score=96.20 Aligned_cols=36 Identities=31% Similarity=0.561 Sum_probs=33.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (506)
+||+|||||++||+||+.|++. |.+|+|+|+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 7999999999999999999998 89999999988766
No 141
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.61 E-value=3.6e-07 Score=95.12 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA------SFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~------G~~V~vlE~~~~~G 64 (506)
.+||+|||||++||+||+.|++. |.+|+|+||....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 58999999999999999999997 99999999976544
No 142
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.57 E-value=1.6e-07 Score=94.62 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=35.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 489999999999999999999999999999997 778754
No 143
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.57 E-value=1.1e-07 Score=96.03 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (506)
++||+|||||++||+||+.|++. |.+|+|||+++.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 47999999999999999999998 89999999987754
No 144
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.55 E-value=1.9e-07 Score=91.25 Aligned_cols=39 Identities=26% Similarity=0.456 Sum_probs=34.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
.++.+|+|||||+||++||..|.+.+.+|+|+|+++.++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 357899999999999999999977889999999987644
No 145
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.53 E-value=2.3e-07 Score=91.84 Aligned_cols=36 Identities=19% Similarity=0.300 Sum_probs=32.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHH---CCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHD---ASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~---~G~~V~vlE~~~~~ 63 (506)
++||+|||||++||+||..|++ .|++|+|+|+++..
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 3689999999999999999999 89999999998743
No 146
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.50 E-value=2.6e-07 Score=93.65 Aligned_cols=38 Identities=18% Similarity=0.432 Sum_probs=34.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CcEEEEeeCCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS---FKVVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G---~~V~vlE~~~~~G 64 (506)
+++||+|||||++|++||..|++.| .+|+|+|+++.+|
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 3589999999999999999999988 9999999977554
No 147
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.50 E-value=3e-07 Score=95.10 Aligned_cols=37 Identities=19% Similarity=0.384 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (506)
++||+|||||++||+||+.|++. |.+|+|+|+++.+|
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 36999999999999999999998 78999999987654
No 148
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.49 E-value=4.7e-07 Score=90.04 Aligned_cols=36 Identities=25% Similarity=0.521 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~~ 62 (506)
+++||+|||||++|++||..|++.|. +|+|+|+++.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 46899999999999999999999998 7999998653
No 149
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.48 E-value=1.2e-07 Score=92.24 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=35.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
|.+++||+|||||++|+++|++|++.|.+|+|+|++...+
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPED 42 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCC
Confidence 3457899999999999999999999999999999976433
No 150
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.47 E-value=8.5e-08 Score=97.81 Aligned_cols=55 Identities=25% Similarity=0.369 Sum_probs=39.5
Q ss_pred hhhhhcccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC--------CCCeeE
Q 010587 13 RALCYSNNAGKGQARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD--------RVGGRV 67 (506)
Q Consensus 13 ~~~~~~~~~~~~~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~--------~~GG~~ 67 (506)
++.++.......+..++||+|||||++||+||..|++.|.+|+|+|+++ .+||.|
T Consensus 17 ~~~~m~~~~~~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 79 (519)
T 3qfa_A 17 RGSHMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTC 79 (519)
T ss_dssp ---------CCCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHH
T ss_pred CCCCCCcccccCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCccccc
Confidence 4556655554434557999999999999999999999999999999964 677764
No 151
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.47 E-value=7e-08 Score=97.88 Aligned_cols=41 Identities=32% Similarity=0.478 Sum_probs=37.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++||+||..|++.|++|+|+|+++.+||.|
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~ 64 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTC 64 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 45899999999999999999999999999999999999965
No 152
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.42 E-value=3.9e-07 Score=92.36 Aligned_cols=41 Identities=27% Similarity=0.229 Sum_probs=31.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
..+.+||+|||+|++||++|..|.+.|...+++|+.+..|+
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 34568999999999999999999998877777777666555
No 153
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.41 E-value=2.4e-06 Score=87.49 Aligned_cols=36 Identities=28% Similarity=0.572 Sum_probs=32.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeeCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~ 61 (506)
.+.||+||||||.||+++|.+|++. |.+|+||||.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3579999999999999999999985 78999999965
No 154
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.38 E-value=2.4e-07 Score=92.56 Aligned_cols=42 Identities=43% Similarity=0.590 Sum_probs=39.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
...+||+|||||++||+||+.|++.|++|+|||+++.+||.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 357899999999999999999999999999999999999975
No 155
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.38 E-value=7.3e-07 Score=90.02 Aligned_cols=42 Identities=24% Similarity=0.333 Sum_probs=35.7
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEE-cCCc--EEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~-~~G~--~i~ad~VI~a~~~~ 294 (506)
|++++++++|+.|+.+++.+.+.. .+|+ ++.||+||+|++..
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCc
Confidence 789999999999998887787776 5576 79999999999853
No 156
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.37 E-value=1.6e-07 Score=94.54 Aligned_cols=40 Identities=33% Similarity=0.418 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
.++||+|||||++||+||+.|++.|++|+|+|+ +.+||.|
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~ 43 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTC 43 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcc
Confidence 368999999999999999999999999999999 8899965
No 157
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.37 E-value=8.5e-07 Score=88.75 Aligned_cols=36 Identities=25% Similarity=0.354 Sum_probs=32.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (506)
+||+|||||++|++||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999997 89999999977654
No 158
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.36 E-value=2.2e-07 Score=94.85 Aligned_cols=44 Identities=23% Similarity=0.345 Sum_probs=40.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
+..++||+|||||++|++||++|++.|++|+|+|+++.+||.|.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 45679999999999999999999999999999999888998753
No 159
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.33 E-value=2.3e-07 Score=93.43 Aligned_cols=41 Identities=29% Similarity=0.439 Sum_probs=38.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999989999753
No 160
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.33 E-value=3.7e-07 Score=96.44 Aligned_cols=44 Identities=43% Similarity=0.669 Sum_probs=40.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEEe
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHT 69 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s 69 (506)
..++||+|||||++||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 56799999999999999999999999999999999999998643
No 161
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.31 E-value=3.6e-06 Score=82.38 Aligned_cols=43 Identities=26% Similarity=0.398 Sum_probs=38.8
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++.|++.+|+++.+|.||+|++..
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCC
Confidence 4889999999999998888888999999899999999999864
No 162
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.31 E-value=3.2e-07 Score=92.71 Aligned_cols=41 Identities=34% Similarity=0.423 Sum_probs=37.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++||+||++|++.|++|+|+|+++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999988666653
No 163
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.28 E-value=3.7e-07 Score=91.77 Aligned_cols=49 Identities=20% Similarity=0.316 Sum_probs=40.9
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCc-EEEcCEEEEecChh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLG 294 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~-~i~ad~VI~a~~~~ 294 (506)
+.+.+. .|++++++++|++|+.+++++.|++.+|+ ++.+|.||+|++..
T Consensus 213 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 213 LAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC
Confidence 344443 48999999999999987777889999998 89999999999853
No 164
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.28 E-value=3e-07 Score=88.94 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=33.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC------CcEEEEeeCCCCCe
Q 010587 29 PSVIVIGAGMAGVAAARALHDAS------FKVVLLESRDRVGG 65 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G------~~V~vlE~~~~~GG 65 (506)
+||+|||||++||++|++|+++| .+|+|+|++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 59999999999999999999998 89999999764444
No 165
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.27 E-value=5e-06 Score=83.35 Aligned_cols=42 Identities=45% Similarity=0.634 Sum_probs=38.1
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
|++++++++|++|+.+++++.|++.+|+++.+|.||+|++..
T Consensus 222 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 899999999999998888888888888899999999999864
No 166
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.27 E-value=3.7e-07 Score=92.47 Aligned_cols=42 Identities=29% Similarity=0.442 Sum_probs=37.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEee--------CCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLES--------RDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~--------~~~~GG~~ 67 (506)
.+++||+|||||++||+||..|++.|.+|+|+|+ ...+||.|
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCee
Confidence 4579999999999999999999999999999998 45688865
No 167
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.27 E-value=3.2e-07 Score=92.60 Aligned_cols=41 Identities=34% Similarity=0.516 Sum_probs=38.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 56899999999999999999999999999999998999975
No 168
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.27 E-value=4.4e-07 Score=89.55 Aligned_cols=49 Identities=18% Similarity=0.166 Sum_probs=34.1
Q ss_pred HHHHHh-ccCCeeeCCeeE---------EEEEcCCcEEEEEcCCcEEEcCEEEEecChhh
Q 010587 246 VINTLA-KGLDIRLGHRVT---------KITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 295 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~---------~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~~ 295 (506)
+.+.+. .|++|+++++|+ +|+.+++++.|.+.+| +++||.||+|++...
T Consensus 178 L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 178 AAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 444443 388999999999 9988777787877777 899999999999764
No 169
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.26 E-value=7.1e-07 Score=89.87 Aligned_cols=42 Identities=33% Similarity=0.423 Sum_probs=38.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
..++||+|||||++|++||++|++.|++|+|+|++ .+||.+.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 35799999999999999999999999999999997 7898653
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.26 E-value=3.4e-07 Score=91.67 Aligned_cols=40 Identities=28% Similarity=0.460 Sum_probs=37.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
+++||+|||||++|++||++|++.|++|+|+|++ .+||.|
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTC 42 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcc
Confidence 4689999999999999999999999999999996 789875
No 171
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.23 E-value=6e-07 Score=89.31 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+++||+|||||++||++|+.|++.|++|+|+|+++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 56899999999999999999999999999999975
No 172
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.22 E-value=7.5e-07 Score=89.35 Aligned_cols=40 Identities=33% Similarity=0.455 Sum_probs=37.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 40 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTC 40 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCcc
Confidence 3799999999999999999999999999999988899864
No 173
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.22 E-value=4.4e-07 Score=91.71 Aligned_cols=40 Identities=33% Similarity=0.560 Sum_probs=36.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
.++||+|||||++||+||+.|++.|++|+|+|+ +.+||.|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~-~~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVES-HKLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCcc
Confidence 469999999999999999999999999999997 4788875
No 174
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.22 E-value=1e-06 Score=93.41 Aligned_cols=43 Identities=33% Similarity=0.686 Sum_probs=40.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
...+||+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 4578999999999999999999999999999999999999764
No 175
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.22 E-value=3.7e-07 Score=92.47 Aligned_cols=49 Identities=29% Similarity=0.359 Sum_probs=40.0
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCC-cEEEEEcCCcEEEcCEEEEecChh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~-~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+.+.|. .|++|+++++|++|+.+++ .+.|++.+|+++.+|.||+|++..
T Consensus 241 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 241 VTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 444444 4899999999999998754 477888899899999999999853
No 176
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.20 E-value=5.7e-07 Score=90.80 Aligned_cols=41 Identities=34% Similarity=0.542 Sum_probs=37.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
+++||+|||||++|++||+.|++.|.+|+|+|++ .+||.|.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 4689999999999999999999999999999996 7888763
No 177
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.20 E-value=5.5e-07 Score=91.16 Aligned_cols=39 Identities=38% Similarity=0.517 Sum_probs=36.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++||+||..|++.|++|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 489999999999999999999999999999995 589875
No 178
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.20 E-value=1.1e-06 Score=86.05 Aligned_cols=35 Identities=34% Similarity=0.536 Sum_probs=33.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRV 63 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~ 63 (506)
+||+|||||++||++|+.|++. |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998766
No 179
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.19 E-value=6.4e-07 Score=90.62 Aligned_cols=49 Identities=22% Similarity=0.293 Sum_probs=40.0
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCC-cEEEEEcCCcEEEcCEEEEecChh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~-~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+.+.+. .|++|+++++|++|+.+++ .+.|++.+|+++.+|.||+|++..
T Consensus 237 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 237 LTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 344443 4899999999999998764 478888899889999999999853
No 180
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.19 E-value=1.1e-05 Score=80.64 Aligned_cols=43 Identities=14% Similarity=0.281 Sum_probs=37.3
Q ss_pred ccCCeeeCCeeEEEEEcCCc-EEEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.++++ +.|++.+|+++.+|.||+|++..
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 38999999999999986544 78888999899999999999853
No 181
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.18 E-value=9.1e-07 Score=89.47 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=31.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEee
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (506)
..++||+|||||++|++||++|++.|++|+|+|+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 3579999999999999999999999999999995
No 182
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=6.1e-07 Score=90.01 Aligned_cols=41 Identities=27% Similarity=0.445 Sum_probs=38.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
.++||+|||||++|++||.+|++.|++|+|+|+ +.+||.|.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 469999999999999999999999999999999 78999763
No 183
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.16 E-value=1.2e-06 Score=90.89 Aligned_cols=41 Identities=27% Similarity=0.431 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
..+||+|||||++|++||+.|++.|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999888743
No 184
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.16 E-value=1.2e-05 Score=80.69 Aligned_cols=43 Identities=28% Similarity=0.442 Sum_probs=36.9
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEc-C--Cc--EEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVE-G--GK--TFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~-~--G~--~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++.|++. + |+ ++.+|.||+|++..
T Consensus 223 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 38999999999999988777777776 6 76 89999999999854
No 185
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.15 E-value=1.4e-05 Score=80.16 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 469999999999999999999999999999986643
No 186
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=9.8e-07 Score=89.57 Aligned_cols=39 Identities=44% Similarity=0.624 Sum_probs=36.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++|++||..|++.|++|+|+|++ .+||.|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccc
Confidence 589999999999999999999999999999997 588865
No 187
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.13 E-value=9.7e-07 Score=89.62 Aligned_cols=49 Identities=22% Similarity=0.344 Sum_probs=41.1
Q ss_pred HHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 246 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 246 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+.+.+. .|++|+++++|++|+.+++++.|++.+|+++.+|.||+|++..
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 334443 4899999999999998877788888888899999999999864
No 188
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.13 E-value=1.8e-06 Score=85.02 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=33.4
Q ss_pred CCCCceEeeccccCC-cCcchhhHHHHHHHHHHHHHHHHHHHHc
Q 010587 439 IPVDNLFFAGEATSM-SYPGSVHGAFSTGLMAAEDCRMRVLERY 481 (506)
Q Consensus 439 ~p~~~l~~aG~~~~~-~~~g~~egA~~sG~~aA~~i~~~l~~~~ 481 (506)
+.++|+|-+||++.. ..+-...-|...|..+|++|+..|..+.
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEE 327 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 456899999998754 2234566788999999999999998654
No 189
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.10 E-value=1.2e-05 Score=79.20 Aligned_cols=43 Identities=26% Similarity=0.400 Sum_probs=37.7
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.++....|++.+|+++.||.||+|++..
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 3899999999999988665457899999999999999999864
No 190
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.09 E-value=2.8e-06 Score=80.89 Aligned_cols=38 Identities=37% Similarity=0.400 Sum_probs=34.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (506)
++||+|||||++|+.||+.|++.|.+|+|+|++...+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCC
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCC
Confidence 47999999999999999999999999999999876554
No 191
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.08 E-value=1.6e-06 Score=87.16 Aligned_cols=39 Identities=36% Similarity=0.519 Sum_probs=36.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
++||+|||||++|++||..|++.|++|+|+|+++ +||.|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 4899999999999999999999999999999976 88854
No 192
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.07 E-value=1.9e-05 Score=79.08 Aligned_cols=36 Identities=31% Similarity=0.518 Sum_probs=33.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 579999999999999999999999999999987654
No 193
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.06 E-value=3e-06 Score=89.20 Aligned_cols=42 Identities=29% Similarity=0.515 Sum_probs=39.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeE
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (506)
..++||+|||||++||+||..|++.|++|+|+|+++.+||.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQF 412 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCee
Confidence 456899999999999999999999999999999999999865
No 194
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.05 E-value=2.6e-05 Score=78.56 Aligned_cols=42 Identities=10% Similarity=0.245 Sum_probs=36.1
Q ss_pred ccCCeeeCCeeEEEEEcCCc--EEEEEcCC-cEEEcCEEEEecCh
Q 010587 252 KGLDIRLGHRVTKITRHYIG--VKVTVEGG-KTFVADAVVVAVPL 293 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~--v~V~~~~G-~~i~ad~VI~a~~~ 293 (506)
.|++++++++|++|+.++++ +.|++.+| +++.+|.||+|++.
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 38999999999999886554 77888899 78999999999985
No 195
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.04 E-value=3.1e-06 Score=86.45 Aligned_cols=50 Identities=12% Similarity=0.116 Sum_probs=38.6
Q ss_pred HHHHHh--ccCCeeeCCeeEEEEEcCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 010587 246 VINTLA--KGLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGVL 296 (506)
Q Consensus 246 l~~~l~--~g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VI~a~~~~~~ 296 (506)
|.+.+. .|++++.+ +|++|+.++++ +.|++.+|.+++||.||.|++....
T Consensus 181 L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 181 LTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 334444 48999999 59999886544 3688888778999999999998653
No 196
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.02 E-value=3.3e-05 Score=78.31 Aligned_cols=36 Identities=28% Similarity=0.514 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 478999999999999999999999999999987654
No 197
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.02 E-value=3e-05 Score=76.98 Aligned_cols=42 Identities=33% Similarity=0.434 Sum_probs=36.8
Q ss_pred cCCeeeCCeeEEEEE--cCCcE-EEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITR--HYIGV-KVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~--~~~~v-~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
|++++++++|++|+. +++++ .|++.+|+++.+|.||+|++..
T Consensus 205 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 899999999999997 55666 5888899899999999999864
No 198
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.00 E-value=2.5e-06 Score=86.69 Aligned_cols=46 Identities=17% Similarity=0.149 Sum_probs=40.6
Q ss_pred HHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecC
Q 010587 247 INTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVP 292 (506)
Q Consensus 247 ~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~ 292 (506)
.+.|. +|+++++++.|++++..++++.|.+.++.++.+|.|++|++
T Consensus 270 ~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 270 KLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 33443 48999999999999999999999999998999999999997
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.00 E-value=2.4e-05 Score=78.17 Aligned_cols=37 Identities=38% Similarity=0.565 Sum_probs=33.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
...+++|||||.+|+.+|..|++.|.+|+|+|+.+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 4589999999999999999999999999999987654
No 200
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.99 E-value=2.6e-05 Score=78.60 Aligned_cols=37 Identities=22% Similarity=0.454 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+++|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 219 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc
Confidence 5799999999999999999999999999999976543
No 201
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.98 E-value=4.3e-05 Score=77.26 Aligned_cols=46 Identities=20% Similarity=0.068 Sum_probs=37.6
Q ss_pred HHhccCCeeeCCeeEEEEEcCCcEEEEEc--CC--cEEEcCEEEEecChh
Q 010587 249 TLAKGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPLG 294 (506)
Q Consensus 249 ~l~~g~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~i~ad~VI~a~~~~ 294 (506)
.|.++++|+++++|++|+.+++++.|++. +| +++.+|.||+|++..
T Consensus 224 ~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 224 TFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred HHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 33434889999999999998888888775 67 689999999999853
No 202
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.98 E-value=4e-05 Score=77.63 Aligned_cols=43 Identities=16% Similarity=0.171 Sum_probs=36.9
Q ss_pred ccCCeeeCCeeEEEEEcCC-cEEEEEcCCcE-EEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYI-GVKVTVEGGKT-FVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~-~v~V~~~~G~~-i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++ .+.|++.+|++ +.+|.||+|++..
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 4899999999999988654 47888889987 9999999999853
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.98 E-value=3.7e-05 Score=75.68 Aligned_cols=36 Identities=25% Similarity=0.545 Sum_probs=33.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 579999999999999999999999999999987653
No 204
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.97 E-value=3.3e-06 Score=92.22 Aligned_cols=41 Identities=41% Similarity=0.674 Sum_probs=39.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
.+||+|||||++||+||..|++.|++|+|+|+++++||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999999875
No 205
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.97 E-value=2.4e-05 Score=78.94 Aligned_cols=43 Identities=28% Similarity=0.241 Sum_probs=36.8
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcC----CcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEG----GKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~----G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++.|++.+ |+++.+|.||+|++..
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 388999999999999887777787776 7789999999999853
No 206
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.97 E-value=4.8e-06 Score=91.62 Aligned_cols=41 Identities=27% Similarity=0.516 Sum_probs=38.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~~~GG~~ 67 (506)
..+||+|||||++||+||+.|++.|+ +|+|||+.+.+||.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46899999999999999999999999 799999999999975
No 207
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.96 E-value=4.1e-06 Score=85.68 Aligned_cols=36 Identities=28% Similarity=0.528 Sum_probs=31.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEeeCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~ 61 (506)
.+.||+||||||.+|+.+|.+|++ .|++|+|||+.+
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 457999999999999999999998 578999999954
No 208
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.96 E-value=4.3e-06 Score=83.12 Aligned_cols=38 Identities=34% Similarity=0.615 Sum_probs=35.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHD--ASFKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~--~G~~V~vlE~~~~~GG 65 (506)
++||+|||||++||+||++|++ .|++|+|+|+++..++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~ 41 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF 41 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc
Confidence 4799999999999999999999 7899999999887765
No 209
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.95 E-value=3.8e-05 Score=78.23 Aligned_cols=43 Identities=26% Similarity=0.371 Sum_probs=37.0
Q ss_pred ccCCeeeCCeeEEEEEcCCc----EEEEEcCCc-EEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIG----VKVTVEGGK-TFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~----v~V~~~~G~-~i~ad~VI~a~~~~ 294 (506)
.|++|+++++|++|+.++++ +.|++.+|+ ++.||.||+|++..
T Consensus 268 ~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 268 QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 48999999999999986555 678888887 89999999999853
No 210
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.95 E-value=5.5e-05 Score=75.90 Aligned_cols=42 Identities=29% Similarity=0.376 Sum_probs=35.8
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEc-CC--cEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVE-GG--KTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~-~G--~~i~ad~VI~a~~~~ 294 (506)
|++++++++|++|+.+++++.|++. +| +++.+|.||+|++..
T Consensus 226 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 8999999999999987777777765 66 579999999999864
No 211
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.94 E-value=5e-05 Score=76.42 Aligned_cols=43 Identities=19% Similarity=0.294 Sum_probs=38.8
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++.|.+.+|+++.||.||+|++..
T Consensus 215 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEE
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 3899999999999998888888888899899999999999863
No 212
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.94 E-value=4.5e-06 Score=83.38 Aligned_cols=41 Identities=27% Similarity=0.296 Sum_probs=37.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-C------CCcEEEEeeCCCCCeeEE
Q 010587 28 SPSVIVIGAGMAGVAAARALHD-A------SFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~-~------G~~V~vlE~~~~~GG~~~ 68 (506)
++||+|||||++|++||..|++ . |.+|+|||+.+.+||.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 5799999999999999999999 7 999999999989998763
No 213
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.93 E-value=5.4e-05 Score=76.56 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA---SFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~---G~~V~vlE~~~~~ 63 (506)
..+++|||||..|+-+|..|++. |.+|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 47999999999999999999999 9999999986643
No 214
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.93 E-value=4.7e-05 Score=76.92 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA---SFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~---G~~V~vlE~~~~~ 63 (506)
..+++|||||..|+-+|..|++. |.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 47999999999999999999999 9999999987653
No 215
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.92 E-value=6.4e-05 Score=75.13 Aligned_cols=42 Identities=14% Similarity=0.185 Sum_probs=37.1
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++|+++++|++|+..++++.|.+.+| ++.||.||+|++..
T Consensus 202 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 202 QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 3889999999999998778888888877 89999999999854
No 216
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.92 E-value=6.8e-06 Score=82.20 Aligned_cols=39 Identities=28% Similarity=0.495 Sum_probs=34.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGGR 66 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG~ 66 (506)
++||+|||||++||+||+.|++. |.+|+|+|+++.+++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA 43 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC
Confidence 58999999999999999999998 7899999999887754
No 217
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.92 E-value=3.5e-06 Score=85.20 Aligned_cols=40 Identities=38% Similarity=0.606 Sum_probs=37.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCCeeEE
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (506)
++||+|||||++||+||+.|++. ++|+|||+++++||.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 46999999999999999999999 99999999999998753
No 218
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.90 E-value=6.9e-06 Score=82.15 Aligned_cols=41 Identities=29% Similarity=0.367 Sum_probs=37.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEeeCCCCCeeE
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDRVGGRV 67 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~~GG~~ 67 (506)
.++||+|||||++|++||..|++.| .+|+|||+.+.+||..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 4689999999999999999999998 9999999999998865
No 219
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=2.7e-05 Score=77.96 Aligned_cols=36 Identities=25% Similarity=0.530 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 579999999999999999999999999999997653
No 220
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.90 E-value=5.5e-05 Score=76.12 Aligned_cols=37 Identities=30% Similarity=0.439 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 214 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG 214 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC
Confidence 4799999999999999999999999999999876543
No 221
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.90 E-value=7e-05 Score=75.21 Aligned_cols=43 Identities=23% Similarity=0.265 Sum_probs=35.1
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEc--CC--cEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++.|++. +| +++.+|.||+|++..
T Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 229 EKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp TCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred CCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 48999999999999987777777765 66 579999999999864
No 222
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.89 E-value=7.8e-06 Score=84.93 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=32.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEee
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (506)
...+||+|||||++||+||.+|++.|++|+|+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 4579999999999999999999999999999997
No 223
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.88 E-value=9.3e-05 Score=76.28 Aligned_cols=35 Identities=31% Similarity=0.536 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+|+|||||.+|+-+|..|++.|.+|+++|+.++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998553
No 224
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.88 E-value=6.6e-05 Score=75.07 Aligned_cols=35 Identities=26% Similarity=0.603 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+++|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 47899999999999999999999999999998654
No 225
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.87 E-value=4.1e-06 Score=85.52 Aligned_cols=37 Identities=27% Similarity=0.486 Sum_probs=33.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
...+|+||||||.+|+++|.+|++ |.+|+|||+....
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 356999999999999999999999 9999999996554
No 226
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.86 E-value=1e-05 Score=82.99 Aligned_cols=37 Identities=41% Similarity=0.538 Sum_probs=33.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
...+|++|||||++|+++|++|++.|.+|+|||+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3579999999999999999999999999999999764
No 227
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.84 E-value=1.4e-05 Score=78.90 Aligned_cols=40 Identities=28% Similarity=0.425 Sum_probs=34.6
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+++++++++|+.|+.+.. .|++.+|+++.||++|+|++..
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 889999999999987654 5777888899999999999854
No 228
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.84 E-value=7e-05 Score=75.64 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=38.6
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++.|++.+|+++.||.||+|++..
T Consensus 239 ~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 239 EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp TTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred cCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 3899999999999998777788889999999999999999864
No 229
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.83 E-value=5.5e-05 Score=76.03 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 3579999999999999999999999999999986643
No 230
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.82 E-value=1.3e-05 Score=78.41 Aligned_cols=35 Identities=23% Similarity=0.520 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~ 61 (506)
+++||+|||||++|++||..|++.| .+|+|+|+++
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 4689999999999999999999998 4699999864
No 231
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.81 E-value=1.3e-05 Score=80.33 Aligned_cols=37 Identities=27% Similarity=0.277 Sum_probs=34.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCe
Q 010587 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGG 65 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG 65 (506)
+||+|||||++|++||..|++. |.+|+|+|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 5899999999999999999998 999999999887653
No 232
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.81 E-value=9.8e-05 Score=74.58 Aligned_cols=36 Identities=36% Similarity=0.495 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
...+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 457999999999999999999999999999998664
No 233
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.80 E-value=0.00014 Score=73.14 Aligned_cols=43 Identities=35% Similarity=0.361 Sum_probs=36.8
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCC---cEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G---~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++++.|+..++ +++.+|.||+|++..
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 3889999999999999888888777755 579999999999853
No 234
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.80 E-value=1.1e-05 Score=80.25 Aligned_cols=37 Identities=30% Similarity=0.573 Sum_probs=33.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHH---CCCcEEEEeeCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHD---ASFKVVLLESRDR 62 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~---~G~~V~vlE~~~~ 62 (506)
..++||+|||||++|++||+.|++ .|++|+|+|+++.
T Consensus 2 ~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 2 RGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp TTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 346899999999999999999999 8999999999874
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.78 E-value=1.7e-05 Score=78.20 Aligned_cols=38 Identities=24% Similarity=0.429 Sum_probs=34.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~~~G 64 (506)
+++||+|||||++|++||..|++.|. +|+|+|+++.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 56899999999999999999999998 599999987654
No 236
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.77 E-value=0.00014 Score=73.02 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=35.8
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+.+++.+.|.+.+ .++.+|.||+|++..
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~-~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTTH-GELRADKLLVATGRT 270 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEETT-EEEEESEEEECSCEE
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEECC-cEEEcCEEEECCCCC
Confidence 489999999999999877777777764 489999999999864
No 237
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.77 E-value=0.00014 Score=73.98 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
-+.+++|||||..|+=.|..+++.|.+|+|+++.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 3578999999999999999999999999999873
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.76 E-value=0.00011 Score=74.17 Aligned_cols=37 Identities=27% Similarity=0.421 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
...+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 3578999999999999999999999999999986643
No 239
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.73 E-value=1.7e-05 Score=80.20 Aligned_cols=40 Identities=23% Similarity=0.411 Sum_probs=35.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (506)
+..++||+|||||++|++||..|.+. |.+|+|+|+++.++
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 44578999999999999999999887 88999999987654
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.73 E-value=0.00011 Score=74.04 Aligned_cols=37 Identities=27% Similarity=0.504 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
...+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHI 221 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCch
Confidence 4589999999999999999999999999999986643
No 241
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.72 E-value=0.00017 Score=72.25 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=36.4
Q ss_pred ccCCeeeCCeeEEEEEcCCc-EEEE-EcCCcEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIG-VKVT-VEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~-v~V~-~~~G~~i~ad~VI~a~~~~ 294 (506)
.|++|+++++|++|+.++++ +.|+ +.+|+ +.+|.||+|++..
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 38999999999999987655 6788 88996 9999999999853
No 242
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.72 E-value=2.3e-05 Score=79.26 Aligned_cols=38 Identities=16% Similarity=0.531 Sum_probs=34.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
.+.+++|||||||++|+++|..|++.+++|+|+|+++.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 45578999999999999999999999999999999763
No 243
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.67 E-value=2.3e-05 Score=80.34 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=33.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDR 62 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~ 62 (506)
.+.||+||||||.||+++|.+|++.| .+|+||||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 69999999654
No 244
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=2.7e-05 Score=75.48 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
..||+|||||++|++||..|++.| +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 469999999999999999999999 99999997653
No 245
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.65 E-value=3.2e-05 Score=78.37 Aligned_cols=38 Identities=24% Similarity=0.333 Sum_probs=35.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+|++|||||++|+++|++|++.|.+|+|+|+..+.+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46999999999999999999999999999999977654
No 246
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.64 E-value=0.00024 Score=73.47 Aligned_cols=35 Identities=29% Similarity=0.515 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+++|||||.+|+-+|..|++.|.+|+++|+.++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 47899999999999999999999999999998654
No 247
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.62 E-value=0.0003 Score=70.81 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+++|||||.+|+-+|..|++.|.+|+|+++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 57999999999999999999999999999998654
No 248
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.58 E-value=0.00042 Score=69.43 Aligned_cols=41 Identities=22% Similarity=0.326 Sum_probs=35.6
Q ss_pred CCeeeCCeeEEEEEcC-CcEEEEEc--CCc--EEEcCEEEEecChh
Q 010587 254 LDIRLGHRVTKITRHY-IGVKVTVE--GGK--TFVADAVVVAVPLG 294 (506)
Q Consensus 254 ~~i~~~~~V~~I~~~~-~~v~V~~~--~G~--~i~ad~VI~a~~~~ 294 (506)
++++++++|++|+.++ +++.|++. +|+ ++.+|.||+|++..
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEE
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCC
Confidence 7899999999999877 78888877 676 79999999999854
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.56 E-value=0.00039 Score=69.36 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=32.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+++|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 46999999999999999999999999999998664
No 250
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.54 E-value=0.00021 Score=69.14 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=32.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
.+++|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 78999999999999999999999999999986643
No 251
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.52 E-value=4.9e-05 Score=75.49 Aligned_cols=45 Identities=22% Similarity=0.445 Sum_probs=36.1
Q ss_pred HHHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecCh
Q 010587 245 PVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 293 (506)
Q Consensus 245 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~ 293 (506)
.+.+.+. +|++++++++|++++.. .|++.+|+++.+|.||+|++.
T Consensus 193 ~~~~~l~~~gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 193 PILDELDKREIPYRLNEEINAINGN----EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp HHHHHHHHTTCCEEESCCEEEEETT----EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHhhccceEEEeccEEEEecCC----eeeecCCeEEeeeeEEEEece
Confidence 3455554 49999999999988632 477889999999999999984
No 252
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.51 E-value=0.00064 Score=64.24 Aligned_cols=34 Identities=35% Similarity=0.465 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 5789999999999999999999999999999855
No 253
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.50 E-value=6.1e-05 Score=74.74 Aligned_cols=35 Identities=34% Similarity=0.621 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~ 62 (506)
.++|+|||||++|++||.+|++.+ .+|+|+|+++.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 358999999999999999999865 78999999874
No 254
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.50 E-value=6.5e-05 Score=76.11 Aligned_cols=37 Identities=27% Similarity=0.397 Sum_probs=34.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
...+|++|||||.+|+++|++|++.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3569999999999999999999999999999999754
No 255
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.50 E-value=0.00092 Score=66.88 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=37.0
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEc---CCc--EEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVE---GGK--TFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~---~G~--~i~ad~VI~a~~~~ 294 (506)
.|++|+++++|++|+.+++++.|++. +|+ ++.+|.||+|++..
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 38899999999999998888888776 675 48999999999964
No 256
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.47 E-value=0.00038 Score=69.11 Aligned_cols=37 Identities=22% Similarity=0.457 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+++|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll 183 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN 183 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc
Confidence 4689999999999999999999999999999877643
No 257
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.45 E-value=4.6e-05 Score=77.86 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=32.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~ 63 (506)
.||+||||||.+|+++|.+|++ .|.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999999 68999999996544
No 258
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.44 E-value=0.00088 Score=67.43 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (506)
..+++|||||.+|+-+|..|++.|.+|+|+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 218 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR 218 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 46899999999999999999999999999986
No 259
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.41 E-value=9.2e-05 Score=75.68 Aligned_cols=37 Identities=35% Similarity=0.476 Sum_probs=33.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~~~ 63 (506)
+.+|++|||||++|+++|++|++. |.+|+|||+.+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 469999999999999999999998 8999999997654
No 260
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.37 E-value=0.00012 Score=75.58 Aligned_cols=37 Identities=24% Similarity=0.449 Sum_probs=33.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~ 63 (506)
..+|++|||||.+|+++|++|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 79999999996543
No 261
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.36 E-value=0.00069 Score=65.48 Aligned_cols=41 Identities=10% Similarity=0.222 Sum_probs=34.8
Q ss_pred CCeeeCCeeEEEEEcCCcEEEEEcCCcEEE-cCEEEEecChh
Q 010587 254 LDIRLGHRVTKITRHYIGVKVTVEGGKTFV-ADAVVVAVPLG 294 (506)
Q Consensus 254 ~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~-ad~VI~a~~~~ 294 (506)
+++++++.|++|+.+++.+.|++.+|+++. +|.||+|++..
T Consensus 230 v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp EEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBC
T ss_pred EEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccC
Confidence 899999999999877777788888997665 59999999864
No 262
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.35 E-value=0.0041 Score=63.39 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..++|+|||+|.+|+-+|..|++.+.+|+|+++.++
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 468999999999999999999999999999999765
No 263
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.34 E-value=0.0013 Score=61.75 Aligned_cols=34 Identities=35% Similarity=0.448 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 5899999999999999999999999999999755
No 264
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.32 E-value=0.0019 Score=65.79 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=33.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
...++|+|||+|.+|+-+|..|++.|.+|+|+++.++
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 3468999999999999999999999999999999764
No 265
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.32 E-value=0.0014 Score=66.00 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+++|||||..|+-.|..|++.|.+|+|+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 467999999999999999999999999999973
No 266
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.29 E-value=0.0008 Score=64.02 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
...+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 357899999999999999999999999999997543
No 267
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.28 E-value=0.0019 Score=61.46 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 35799999999999999999999999999999855
No 268
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.23 E-value=0.0029 Score=64.52 Aligned_cols=36 Identities=17% Similarity=0.349 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..++|+|||+|.+|+-+|..|++.|.+|+|+++.++
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 468999999999999999999999999999999764
No 269
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.20 E-value=0.0022 Score=60.67 Aligned_cols=34 Identities=32% Similarity=0.438 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 4799999999999999999999999999999754
No 270
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.20 E-value=0.0018 Score=60.84 Aligned_cols=35 Identities=40% Similarity=0.418 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 47899999999999999999999999999997553
No 271
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.14 E-value=0.0023 Score=60.42 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||||.+|+-.|..|++.|.+|+++++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 4789999999999999999999999999999754
No 272
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.09 E-value=0.0021 Score=61.79 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 57899999999999999999999999999998653
No 273
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.08 E-value=0.0027 Score=59.84 Aligned_cols=35 Identities=37% Similarity=0.499 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 35799999999999999999999999999999754
No 274
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.05 E-value=0.0012 Score=66.62 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=31.6
Q ss_pred cCCeeeCCeeEEEEEcCCcEEEEEcCCc----EEEcCEEEEecCh
Q 010587 253 GLDIRLGHRVTKITRHYIGVKVTVEGGK----TFVADAVVVAVPL 293 (506)
Q Consensus 253 g~~i~~~~~V~~I~~~~~~v~V~~~~G~----~i~ad~VI~a~~~ 293 (506)
|++|++|+.|++|+.++..+.+...+|+ ++.||.||.|++.
T Consensus 286 GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 286 SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred ceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 8999999999998754333345556664 6899999999974
No 275
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.03 E-value=0.0022 Score=60.79 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 5789999999999999999999999999999754
No 276
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.99 E-value=0.0034 Score=58.89 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 57899999999999999999999999999997553
No 277
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.91 E-value=0.0054 Score=62.20 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (506)
..+++|||||..|+-.|..|++.|.+|+|+++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~ 241 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVR 241 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 45699999999999999999999999999997
No 278
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.88 E-value=0.0072 Score=62.49 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999974
No 279
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.76 E-value=0.0051 Score=62.36 Aligned_cols=35 Identities=40% Similarity=0.418 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+|+|||||.+|+-+|..|++.|.+|+++++.++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 57999999999999999999999999999987543
No 280
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.69 E-value=0.0056 Score=56.82 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=32.1
Q ss_pred CCCceEeeccccCCcCcchhhHHHHHHHHHHHHHHHHHHH
Q 010587 440 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 479 (506)
Q Consensus 440 p~~~l~~aG~~~~~~~~g~~egA~~sG~~aA~~i~~~l~~ 479 (506)
..+|||.+||+... +..+..|+..|..||.+|.+.|..
T Consensus 256 ~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 256 TARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp SSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 46799999999874 367778999999999999988865
No 281
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.65 E-value=0.0034 Score=66.14 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=33.3
Q ss_pred CCCeEEEEC--CCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 27 RSPSVIVIG--AGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIG--aGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
...+|+||| +|.+|+-+|..|++.|.+|++++..+.+.
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 456899999 99999999999999999999999866543
No 282
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.28 E-value=0.0037 Score=58.75 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=32.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 46899999999999999999999999999998664
No 283
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.18 E-value=0.0079 Score=48.97 Aligned_cols=37 Identities=16% Similarity=0.307 Sum_probs=33.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+.+|+|||.|-.|...|..|.+.|++|+++|++.
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3456789999999999999999999999999999864
No 284
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.17 E-value=0.0032 Score=61.18 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=33.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 3689999999999999999999999999999987654
No 285
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.06 E-value=0.0074 Score=50.12 Aligned_cols=35 Identities=20% Similarity=0.433 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999999999999999854
No 286
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.93 E-value=0.0076 Score=47.14 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~ 60 (506)
++.+|+|+|+|..|...|..|.+.| ++|.+++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4578999999999999999999999 899999975
No 287
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.93 E-value=0.0086 Score=48.49 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.++|+|||+|..|...|..|.+.|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999999999974
No 288
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.85 E-value=0.0099 Score=48.37 Aligned_cols=34 Identities=35% Similarity=0.441 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+.+|+|+|+|-.|...|..|.+.|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5689999999999999999999999999999853
No 289
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.66 E-value=0.01 Score=55.69 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 35789999999999999999999999999999743
No 290
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.61 E-value=0.0075 Score=59.67 Aligned_cols=36 Identities=17% Similarity=0.387 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
.++|+|||.|.+|+++|..|++.|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 467999999999999999999999999999987654
No 291
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.38 E-value=0.013 Score=58.15 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+.++|.|||.|.+|+++|..|++.|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35789999999999999999999999999999854
No 292
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.36 E-value=0.015 Score=54.21 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||||..|...|..++.+|++|+|+|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999743
No 293
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.28 E-value=0.023 Score=46.90 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.+|+|+|+|-.|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999985
No 294
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.13 E-value=0.02 Score=46.51 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.+|+|+|+|..|...|..|.+.|++|++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999974
No 295
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.08 E-value=0.025 Score=52.25 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|..|...|..|++.|++|+++|++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999743
No 296
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.06 E-value=0.019 Score=54.10 Aligned_cols=35 Identities=20% Similarity=0.432 Sum_probs=32.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
...++|.|||.|..|...|..|++.|++|++++++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 35679999999999999999999999999999875
No 297
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.00 E-value=0.027 Score=52.58 Aligned_cols=33 Identities=30% Similarity=0.492 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+|+|||+|..|...|..|++.|++|+++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 467999999999999999999999999999974
No 298
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.96 E-value=0.092 Score=54.94 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=32.4
Q ss_pred ccCCeeeCCeeEEEEEcCCcEEEEEcCC--cEEEcCEEEEecChh
Q 010587 252 KGLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPLG 294 (506)
Q Consensus 252 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G--~~i~ad~VI~a~~~~ 294 (506)
.|++++++++|++|+. +++.++ .+| +++.+|.||+|++..
T Consensus 586 ~GV~v~~~~~v~~i~~--~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 586 RGVKMIPGVSYQKIDD--DGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TTCEEECSCEEEEEET--TEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred cCCEEEeCcEEEEEeC--CeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 4899999999999973 455554 677 578999999999864
No 299
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.91 E-value=0.025 Score=53.26 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+++|+|||+|.-|.+.|..|++.|++|+++.+++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 3689999999999999999999999999999854
No 300
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.84 E-value=0.021 Score=51.95 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+.+.|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46899999999999999999999999999999743
No 301
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.73 E-value=0.03 Score=47.79 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~ 61 (506)
..+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 56899999999999999999999 99999999854
No 302
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.69 E-value=0.029 Score=52.69 Aligned_cols=36 Identities=25% Similarity=0.396 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
.++.+|+|||+|..|.+.|..|++.|+ +|.++|.+.
T Consensus 2 ~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 2 IERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 455789999999999999999999998 999999854
No 303
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.66 E-value=0.034 Score=52.06 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=32.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.++++|.|||.|..|...|..|++.|++|++++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 456899999999999999999999999999999854
No 304
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.66 E-value=0.031 Score=52.40 Aligned_cols=34 Identities=24% Similarity=0.489 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|.-|.+.|..|+++|++|+++|.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999743
No 305
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.65 E-value=0.033 Score=54.41 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=35.6
Q ss_pred hcccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 17 YSNNAGKGQARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 17 ~~~~~~~~~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.+...|. ..++.+|+|||.|..||..|..|+++|++|+.+|-+
T Consensus 11 ~~~~~p~-~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 11 SSGLVPR-GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp --CCCCT-TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred cCCcCCC-CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4455555 346789999999999999999999999999999975
No 306
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.51 E-value=0.026 Score=52.91 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+++|+|||+|.-|.+.|..|++.|++|+++.+++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 3689999999999999999999999999999854
No 307
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.51 E-value=0.04 Score=53.95 Aligned_cols=37 Identities=38% Similarity=0.519 Sum_probs=34.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+++|||+|..|+-+|..|++.|.+|+++|+.+++-
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 5789999999999999999999999999999987654
No 308
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.51 E-value=0.036 Score=48.75 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+...|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4689999999999999999999999999999864
No 309
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.49 E-value=0.043 Score=51.59 Aligned_cols=36 Identities=25% Similarity=0.478 Sum_probs=32.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
+.+.+|+|||||..|.+.|..|+..|+ +|.++|.+.
T Consensus 2 ~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 2 APKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 345789999999999999999999998 999999753
No 310
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.48 E-value=0.034 Score=55.35 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
...+|+|||||.+|+=.|..|++.|.+|+|+++++.
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 458999999999999999999999999999998654
No 311
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.45 E-value=0.042 Score=52.89 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45799999999999999999999999999999754
No 312
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.43 E-value=0.036 Score=52.33 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 3579999999999999999999999999999987653
No 313
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.37 E-value=0.039 Score=52.19 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (506)
...+|+|||+|.+|+-.|..|++.|.+|+++++++++
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 3589999999999999999999999999999986643
No 314
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.36 E-value=0.046 Score=47.82 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..++|+|||+|..|.+.|..|++.|++|.+++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 457899999999999999999999999999998654
No 315
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.34 E-value=0.042 Score=51.83 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHH-HHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVA-AARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~-aA~~L~~~G~~V~vlE~~~ 61 (506)
.+++|.|||.|-+|++ +|..|.+.|++|++.|.++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3578999999999997 7888999999999999865
No 316
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.31 E-value=0.041 Score=53.67 Aligned_cols=37 Identities=32% Similarity=0.445 Sum_probs=33.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+++|||+|.+|+-+|..|.+.|.+|+++|+.+++.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 4789999999999999999999999999999987654
No 317
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.27 E-value=0.041 Score=54.33 Aligned_cols=32 Identities=19% Similarity=0.416 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++|+|||+|..|+..|..|++.|++|++++.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 68999999999999999999999999999975
No 318
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.24 E-value=0.049 Score=51.30 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
++.+|+|||||..|.+.|+.|++.|+ +|.++|.+.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 34689999999999999999999998 999999854
No 319
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.24 E-value=0.037 Score=48.77 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
++|+|||+|-.|...|..|.+.|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999753
No 320
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.17 E-value=0.055 Score=53.17 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
+..+|+|||+|..|...|..|+++|++|+++|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 357899999999999999999999999999998653
No 321
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.15 E-value=0.044 Score=54.55 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.++|+|||+|..|+..|..|++.|++|++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 589999999999999999999999999999974
No 322
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.08 E-value=0.038 Score=54.73 Aligned_cols=36 Identities=31% Similarity=0.482 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CC-cEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDA-SF-KVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~-G~-~V~vlE~~~~ 62 (506)
+.++|+|||+|.-|+..|..|+++ |+ +|++++.+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 457899999999999999999999 99 9999998754
No 323
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.05 E-value=0.05 Score=50.17 Aligned_cols=34 Identities=35% Similarity=0.511 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+.|.|||+|..|...|..|+ +|++|+++|++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999999753
No 324
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.04 E-value=0.051 Score=51.05 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (506)
++++|+|||+|-.|.+.|+.|++.|+ +|++++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45789999999999999999999998 999999853
No 325
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.02 E-value=0.049 Score=50.99 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+++|+|||+|..|...|..|++.|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 368999999999999999999999999999874
No 326
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.98 E-value=0.057 Score=49.84 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=30.2
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+|+|||+|..|.+.|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999865
No 327
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.97 E-value=0.059 Score=50.83 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
+.+|+|||||-.|.+.|..|++.|+ +|.++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999854
No 328
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.97 E-value=0.037 Score=51.40 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+++|+|||+|--|.+.|..|++.|.+|++++++.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 4689999999999999999999999999999863
No 329
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.96 E-value=0.044 Score=52.26 Aligned_cols=35 Identities=26% Similarity=0.400 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+..+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45799999999999999999999999999999753
No 330
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.95 E-value=0.039 Score=51.26 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=31.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
|.++++|.|||.|..|...|..|++.|++|++++++.
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3345789999999999999999999999999999865
No 331
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.94 E-value=0.049 Score=53.95 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc-EEEEeeCCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFK-VVLLESRDRV 63 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~-V~vlE~~~~~ 63 (506)
...+|+|||||.+|+=.|..|++.|.+ |+|+++.+.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 357899999999999999999999998 9999986654
No 332
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.80 E-value=0.061 Score=50.93 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.++|+|||+|.-|.+.|..|++.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999974
No 333
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.71 E-value=0.072 Score=47.87 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..++|.|||+|..|.+.|..|++.|++|++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999874
No 334
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.67 E-value=0.064 Score=51.14 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+++|+|||+|.-|.+.|..|++.|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999974
No 335
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.67 E-value=0.081 Score=52.44 Aligned_cols=36 Identities=28% Similarity=0.375 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~~ 62 (506)
...+|+|||||.+|+-+|..+.+.|. +|++++++++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 46899999999999999999999998 5999988654
No 336
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.58 E-value=0.071 Score=49.68 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++++|.|||.|..|...|..|++.|++|++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 4578999999999999999999999999999875
No 337
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.55 E-value=0.066 Score=53.15 Aligned_cols=34 Identities=32% Similarity=0.369 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|..|...|..|+++|++|+++|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999753
No 338
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.51 E-value=0.036 Score=48.98 Aligned_cols=45 Identities=20% Similarity=0.204 Sum_probs=31.7
Q ss_pred hhhhcccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEE-Eee
Q 010587 14 ALCYSNNAGKGQARSPSVIVIGAGMAGVAAARALHDASFKVVL-LES 59 (506)
Q Consensus 14 ~~~~~~~~~~~~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~v-lE~ 59 (506)
|++...++...| ++++|+|||+|..|.+.|..|++.|++|++ +++
T Consensus 10 ~~~~~~~~~~~m-~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 10 GVDLGTENLYFQ-SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp -------CTTGG-GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred cccccccchhhh-cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 444445555422 357899999999999999999999999988 665
No 339
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.51 E-value=0.069 Score=49.84 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+++|+|||+|--|.+.|..|+ .|.+|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 478999999999999999999 999999999753
No 340
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.50 E-value=0.071 Score=50.04 Aligned_cols=33 Identities=30% Similarity=0.503 Sum_probs=29.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.+++|+|||+|.-|.+.|..|++.|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4678999999999999999999999999999 64
No 341
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.49 E-value=0.076 Score=52.19 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+++|||.|.-|+..|..|+++|++|++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999864
No 342
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.47 E-value=0.074 Score=50.34 Aligned_cols=34 Identities=32% Similarity=0.450 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.++|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4689999999999999999999999999999874
No 343
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.21 E-value=0.12 Score=48.46 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
+..+|+|||+|..|.+.|+.|+..|+ +|.++|.+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 56899999999999999999999997 89999974
No 344
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.19 E-value=0.079 Score=51.64 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=30.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.+.++|+|||+|..|+..|..|++ |++|++++.+
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 345799999999999999999998 9999999975
No 345
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.14 E-value=0.095 Score=50.21 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+++|+|||||..|..+|+.+.+.|++|.++|.++
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5789999999999999999999999999999764
No 346
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.13 E-value=0.087 Score=50.32 Aligned_cols=33 Identities=27% Similarity=0.230 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+++|+|||+|..|...|..|++.|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 368999999999999999999999999999874
No 347
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.09 E-value=0.079 Score=50.40 Aligned_cols=34 Identities=32% Similarity=0.467 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+..+|+|+|||.+|+.+|..|...|. +|.++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 46899999999999999999999999 89999985
No 348
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.05 E-value=0.093 Score=48.84 Aligned_cols=33 Identities=33% Similarity=0.414 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (506)
++|+|||+|..|.+.|+.|+..|+ +|.++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 899999753
No 349
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.04 E-value=0.051 Score=44.25 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+|+|||+|..|...|..|.+.|.+|+|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 578999999999999999999999999999875
No 350
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.00 E-value=0.093 Score=52.20 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|..|...|..|+++|++|+++|.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999753
No 351
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.99 E-value=0.095 Score=48.36 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999854
No 352
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.99 E-value=0.1 Score=48.62 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
+.+|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 3689999999999999999999997 899999753
No 353
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.96 E-value=0.069 Score=53.13 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=32.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESR 60 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~ 60 (506)
|.++++|+|||.|..|+..|..|++. |++|++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 44557999999999999999999999 8999999975
No 354
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.85 E-value=0.086 Score=49.04 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++++|.|||.|..|...|..|++.|++|++++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3578999999999999999999999999999875
No 355
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.76 E-value=0.086 Score=48.95 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=30.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++++|+|||+|..|...|..|++.|++|.+++++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ccceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4468999999999999999999999999999874
No 356
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.75 E-value=0.12 Score=45.34 Aligned_cols=34 Identities=29% Similarity=0.406 Sum_probs=30.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.++|+|||+|..|...|..|++.|++|.+++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468999999999999999999999999999875
No 357
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.74 E-value=0.11 Score=50.49 Aligned_cols=34 Identities=38% Similarity=0.522 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5789999999999999999999999999999743
No 358
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.69 E-value=0.083 Score=52.03 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=29.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++|+|||+|..|+..|..|++.|++|++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999975
No 359
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.65 E-value=0.1 Score=49.64 Aligned_cols=34 Identities=29% Similarity=0.437 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+..+|+|+|||-+|..+|..|...|. +|+|+|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56899999999999999999999998 79999984
No 360
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.65 E-value=0.11 Score=48.66 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~ 61 (506)
+.++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3578999999999999999999999 9999999864
No 361
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.62 E-value=0.12 Score=51.80 Aligned_cols=37 Identities=30% Similarity=0.503 Sum_probs=33.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+++|||+|.+|+-.|..|++.|.+|+++|+.+++.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 227 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL 227 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc
Confidence 5799999999999999999999999999999977653
No 362
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.60 E-value=0.13 Score=47.86 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999998753
No 363
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.57 E-value=0.13 Score=49.73 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||+|..|+.+|..+...|.+|++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999999999999999753
No 364
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.55 E-value=0.073 Score=49.13 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999754
No 365
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.53 E-value=0.12 Score=49.18 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.++|.|||.|..|...|..|++.|++|++++++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3579999999999999999999999999999975
No 366
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.51 E-value=0.14 Score=47.93 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
+.+|+|||+|..|.+.|+.|+..|+ +|.++|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 5689999999999999999999998 999999754
No 367
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.39 E-value=0.14 Score=47.76 Aligned_cols=33 Identities=36% Similarity=0.516 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
..+|+|||+|..|.+.|+.|++.|+ +|.++|.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999985
No 368
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.37 E-value=0.11 Score=48.23 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++++|.|||+|..|...|..|++.|++|.+++++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4578999999999999999999999999999874
No 369
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.28 E-value=0.15 Score=48.76 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+|+|+|+|..|+.+|..|...|.+|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 479999999999999999999999999999874
No 370
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.27 E-value=0.14 Score=47.99 Aligned_cols=33 Identities=30% Similarity=0.449 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
+.+|+|||+|-.|.+.|+.|+..|. +|.++|.+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5789999999999999999999987 89999975
No 371
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.13 E-value=0.11 Score=48.53 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
.+++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35789999999999999999999999 99999985
No 372
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.13 E-value=0.15 Score=47.63 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~ 61 (506)
++|+|||+|..|.+.|..|++. |.+|.++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3699999999999999999995 78999999864
No 373
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.10 E-value=0.12 Score=47.84 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (506)
++.+|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 34789999999999999999999998 899999865
No 374
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.09 E-value=0.19 Score=47.17 Aligned_cols=36 Identities=22% Similarity=0.403 Sum_probs=31.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
..+..+|+|||+|..|.+.|+.|+..|. ++.++|.+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4567899999999999999999999987 79999974
No 375
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.08 E-value=0.11 Score=50.41 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=28.4
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+|+|||+|..|+..|..|++ |++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 69999999999999999999 9999999975
No 376
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.04 E-value=0.11 Score=48.94 Aligned_cols=30 Identities=30% Similarity=0.392 Sum_probs=28.8
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEee
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (506)
+|+|||+|..|.+.|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999987
No 377
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.01 E-value=0.18 Score=47.23 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+|+|||+|..|...|..|++.|++|.+++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4789999999999999999999999999998753
No 378
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.99 E-value=0.17 Score=46.15 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
...++|+|+|-.|.++|..|++.|.+|+|+.++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 478999999999999999999999999999875
No 379
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.88 E-value=0.16 Score=49.40 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.+.+|+|||.|-.|...|..|.+.|++|+|+|.+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35689999999999999999999999999999864
No 380
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.84 E-value=0.15 Score=53.62 Aligned_cols=34 Identities=32% Similarity=0.505 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+..+|+|||+|..|...|..|+++|++|+++|.+
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 344 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVN 344 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECC
Confidence 3467999999999999999999999999999975
No 381
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.84 E-value=0.18 Score=46.79 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=31.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIG-AGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIG-aGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+..+|+||| +|..|.+.|..|++.|++|.+++++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 346899999 99999999999999999999998754
No 382
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.78 E-value=0.18 Score=48.31 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+...|+|+|+|..|+.+|..|+..|.+|++++++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3478999999999999999999999999999874
No 383
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.71 E-value=0.12 Score=47.84 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=29.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.+..+|.+||-|..|...|..|+++|++|++++++.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 355689999999999999999999999999999754
No 384
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.69 E-value=0.15 Score=50.34 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.+.|+|||||-+|...|..|.+.|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3578999999999999999999999999999974
No 385
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.68 E-value=0.057 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..++|.|||+|..|.+.|..|.++|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4578999999999999999999999999998874
No 386
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.67 E-value=0.15 Score=50.57 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHH--------------------HCCC-cEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALH--------------------DASF-KVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~--------------------~~G~-~V~vlE~~~~ 62 (506)
...+|+|||+|.+|+-+|..|+ +.|. +|+|+++.+.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 3579999999999999999999 5687 6999998553
No 387
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.63 E-value=0.17 Score=47.43 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
+..+|+|||+|..|.+.|+.|+..|. ++.++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 35789999999999999999999987 89999974
No 388
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.59 E-value=0.22 Score=46.47 Aligned_cols=34 Identities=24% Similarity=0.474 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (506)
..+|+|||.|..|.+.|..|++.|+ +|.+++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4789999999999999999999999 899998753
No 389
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.57 E-value=0.11 Score=48.71 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-CcEEEEee
Q 010587 29 PSVIVIGAGMAGVAAARALHDA-----S-FKVVLLES 59 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~-----G-~~V~vlE~ 59 (506)
++|+|||+|..|.+.|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999986
No 390
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.55 E-value=0.16 Score=46.51 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=31.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.++++|+|+|||..|...+..|.+.|++|.++.++.
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 356899999999999999999999999999998754
No 391
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.54 E-value=0.099 Score=51.79 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.++|+|+|+|-.|.+.|..|.+.|++|+|+|++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999853
No 392
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.53 E-value=0.19 Score=43.78 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=28.8
Q ss_pred eEEEEC-CCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 30 SVIVIG-AGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 30 dv~IIG-aGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+|+||| +|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 9999999999999999999999874
No 393
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.48 E-value=0.18 Score=50.02 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.+++|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999864
No 394
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.43 E-value=0.23 Score=45.75 Aligned_cols=33 Identities=27% Similarity=0.550 Sum_probs=30.5
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+++|+|||+ |..|.+.|..|++.|++|++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999 999999999999999999999874
No 395
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.42 E-value=0.21 Score=48.00 Aligned_cols=34 Identities=38% Similarity=0.538 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
....|+|||+|..|+.+|..+...|.+|++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4579999999999999999999999999999974
No 396
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.39 E-value=0.11 Score=49.91 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=29.5
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+|+|||+|..|.+.|..|++.|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999874
No 397
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.35 E-value=0.23 Score=46.47 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
+.+|+|||+|..|.+.|+.|+..|. +|.++|.+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999988 899999754
No 398
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.33 E-value=0.16 Score=47.36 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC--CcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDAS--FKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~ 60 (506)
++|+|||+|-.|.+.|..|++.| .+|.+++.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 57999999999999999999999 689999975
No 399
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.29 E-value=0.16 Score=47.64 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
++|+|||+|..|.+.|..|++.|+ +|.++|.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 369999999999999999999998 99999975
No 400
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=91.25 E-value=0.16 Score=48.53 Aligned_cols=40 Identities=33% Similarity=0.660 Sum_probs=35.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC---cEEEEeeCC-CCCee
Q 010587 27 RSPSVIVIGA-GMAGVAAARALHDASF---KVVLLESRD-RVGGR 66 (506)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~---~V~vlE~~~-~~GG~ 66 (506)
....|+|||| |.+|+.|+..+...|. +|+++|.+. .-||+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4689999999 9999999999999998 999999865 44665
No 401
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.22 E-value=0.13 Score=51.21 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~ 60 (506)
+++|+|||.|..|+..|..|++. |++|++++.+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 46899999999999999999998 7899999974
No 402
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.22 E-value=0.25 Score=44.80 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+++|||+|-+|-++|+.|++.|.+|+|+.++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6799999999999999999999999999998754
No 403
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.07 E-value=0.24 Score=44.41 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC----cEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF----KVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~----~V~vlE~~ 60 (506)
+++|.|||+|..|.+.|..|.+.|+ +|.+++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 3679999999999999999999998 99999874
No 404
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.02 E-value=0.22 Score=49.70 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999753
No 405
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.01 E-value=0.2 Score=45.31 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC----CcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDAS----FKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G----~~V~vlE~~~~ 62 (506)
+++|.|||+|.-|.+.|..|++.| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 358999999999999999999999 68999998653
No 406
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.97 E-value=0.14 Score=49.18 Aligned_cols=35 Identities=11% Similarity=0.173 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC-------CcEEEEeeCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDAS-------FKVVLLESRDR 62 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G-------~~V~vlE~~~~ 62 (506)
+++|+|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 457999999999999999999999 99999998653
No 407
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.93 E-value=0.24 Score=45.35 Aligned_cols=32 Identities=25% Similarity=0.526 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
++|+|||+|..|.+.|..|++.|+ +|.+++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89999874
No 408
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.93 E-value=0.18 Score=50.12 Aligned_cols=33 Identities=15% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+++|.|||.|..|.+.|..|+++|++|.+++++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 478999999999999999999999999999875
No 409
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.92 E-value=0.19 Score=45.88 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+...++|+|+|-+|.++|+.|++.|.+|+|+.++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999999999999999999999999999875
No 410
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.87 E-value=0.12 Score=50.36 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=28.2
Q ss_pred CeEEEECCCHHHHHHHHHHHH-CCCcEEEEe
Q 010587 29 PSVIVIGAGMAGVAAARALHD-ASFKVVLLE 58 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE 58 (506)
++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 599999998
No 411
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.83 E-value=0.19 Score=46.95 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=31.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 25 QARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
|+++.+|+|||||-.|.+.|+.|+..+. .+.++|.+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4566899999999999999999999876 79999974
No 412
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.81 E-value=0.25 Score=45.76 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
....|+|||+|-+|.++|..|++.|. +|+|+.++
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35789999999999999999999998 89999875
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.81 E-value=0.24 Score=45.33 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++|+|||+|..|.+.|..|.+.|++|.+++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999874
No 414
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.81 E-value=0.22 Score=46.57 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=31.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
....+|+|||+|..|.+.|+.|+..|. ++.++|.+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 346799999999999999999999887 79999974
No 415
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.77 E-value=0.21 Score=47.27 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
...+|+|||+|.+|+-+|..|++.| +|+++++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3579999999999999999999998 69999875
No 416
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.76 E-value=0.27 Score=45.57 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
...+|+|||+|-.|..+|..|...|.+|++++++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 4679999999999999999999999999999975
No 417
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.73 E-value=0.27 Score=46.44 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
...+|+|||.|..|-+.|..|.+.|++|.+++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35679999999999999999999999999999743
No 418
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=90.73 E-value=0.11 Score=50.74 Aligned_cols=38 Identities=29% Similarity=0.358 Sum_probs=34.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCe
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGG 65 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG 65 (506)
.+||+|||||++|+++|+.|++. |++|+|||+++..+|
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNE 75 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCc
Confidence 48999999999999999999999 999999999755443
No 419
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.73 E-value=0.21 Score=44.95 Aligned_cols=32 Identities=31% Similarity=0.514 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLES 59 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~ 59 (506)
..+|+|||+|-.|..+|..|++.|. +++|+|.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~ 63 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4789999999999999999999998 7999997
No 420
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.68 E-value=0.2 Score=45.35 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC-CcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDAS-FKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~ 60 (506)
++|.|||+|..|.+.|..|++.| ++|.+++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999874
No 421
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.60 E-value=0.21 Score=46.09 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (506)
++|+|||+|..|.+.|+.|++.|+ +|.++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 379999999999999999999988 899999743
No 422
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.57 E-value=0.3 Score=45.13 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
....|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 46799999999999999999999999999999753
No 423
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.56 E-value=0.23 Score=52.43 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=33.1
Q ss_pred CCCeEEEEC--CCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 27 RSPSVIVIG--AGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 27 ~~~dv~IIG--aGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
...+|+||| ||..|+-+|..|++.|.+|+|+++.+ +.
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~ 565 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LA 565 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TT
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cc
Confidence 357999999 99999999999999999999999866 44
No 424
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.55 E-value=0.2 Score=52.58 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+..+|.|||+|..|...|..|+++|++|+++|.+.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 35679999999999999999999999999999753
No 425
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.54 E-value=0.25 Score=46.38 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC----CcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDAS----FKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G----~~V~vlE~~~ 61 (506)
+++|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 468999999999999999999999 7899998743
No 426
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.48 E-value=0.23 Score=46.10 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=30.3
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAG-MAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
...+++|||+| +.|..+|..|...|.+|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 56899999999 67999999999999999988653
No 427
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.34 E-value=0.22 Score=43.78 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=31.5
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 26 ARSPSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 26 ~~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.+++.|+|+|| |..|...+..|.+.|++|.++.++.
T Consensus 2 ~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 2 EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp -CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 34578999996 9999999999999999999998853
No 428
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.30 E-value=0.26 Score=46.05 Aligned_cols=34 Identities=32% Similarity=0.592 Sum_probs=30.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
+..+|+|||+|..|.+.|+.|+..|. +|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45799999999999999999998875 79999975
No 429
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.19 E-value=0.24 Score=45.80 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=29.5
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+|.|||+|..|...|..|++.|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998753
No 430
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.15 E-value=0.27 Score=44.41 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+++|.|||+|..|...|..|.+.|++|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 468999999999999999999999999999874
No 431
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.14 E-value=0.26 Score=49.11 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++|.|||+|..|...|..|++.|++|.+++++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 57999999999999999999999999999975
No 432
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.12 E-value=0.28 Score=51.39 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+-..|+|||||..|-..|+.++..|++|+++|.++
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 35799999999999999999999999999999754
No 433
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.04 E-value=0.24 Score=50.32 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
..++|+|||+|.+|+-.|..|++.|.+|+|+++.+.
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 468999999999999999999999999999998553
No 434
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.04 E-value=0.22 Score=45.83 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=29.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
++|.|||+|..|...|..|++ |++|.+++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999998743
No 435
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.01 E-value=0.43 Score=46.05 Aligned_cols=35 Identities=23% Similarity=0.438 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+.+.|+|||+|..|...|..+.+.|++|.+++.+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 45799999999999999999999999999998754
No 436
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=90.00 E-value=0.23 Score=49.45 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=32.1
Q ss_pred CCCCCeEEEECCCHHHHH-HHHHHHHCCCcEEEEeeCC
Q 010587 25 QARSPSVIVIGAGMAGVA-AARALHDASFKVVLLESRD 61 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~-aA~~L~~~G~~V~vlE~~~ 61 (506)
+...+.|.|||-|-+|++ +|..|.+.|++|.+.|...
T Consensus 15 ~~~~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~ 52 (475)
T 1p3d_A 15 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIAD 52 (475)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCC
T ss_pred cccCCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCC
Confidence 445678999999999998 8889999999999999754
No 437
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.96 E-value=0.26 Score=45.85 Aligned_cols=33 Identities=33% Similarity=0.547 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (506)
++|+|||+|..|.+.|+.|++.|. ++.++|.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 469999999999999999999887 899999854
No 438
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.94 E-value=0.16 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC-------CcEEEEeeCCC
Q 010587 29 PSVIVIGAGMAGVAAARALHDAS-------FKVVLLESRDR 62 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G-------~~V~vlE~~~~ 62 (506)
++|+|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999999 89999998543
No 439
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.92 E-value=0.16 Score=45.20 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.+.+|+|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 45789999999999999999999999 99999864
No 440
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=89.90 E-value=0.15 Score=55.67 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (506)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 4689999999999999999999999999999887653
No 441
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.89 E-value=0.36 Score=44.19 Aligned_cols=34 Identities=12% Similarity=0.254 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---cEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF---KVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~---~V~vlE~~~ 61 (506)
+++|.|||+|.-|.+.|..|.+.|+ +|.+++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999998 899998753
No 442
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.80 E-value=0.24 Score=48.28 Aligned_cols=32 Identities=16% Similarity=0.337 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.+..|||.|.-|+..|..|+++|++|+++|.+
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57899999999999999999999999999975
No 443
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.63 E-value=0.49 Score=47.31 Aligned_cols=54 Identities=19% Similarity=0.103 Sum_probs=41.8
Q ss_pred cchHHHHHHHh-ccCCeeeCCeeEEEEEcCCcEEEEEcCCcEEEcCEEEEecChh
Q 010587 241 RGYLPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 294 (506)
Q Consensus 241 ~G~~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VI~a~~~~ 294 (506)
+|...+-+.+. .|++|++++.|++|+.+++...|.+.+|+++.+|.||+|++..
T Consensus 258 gG~~gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 258 SKADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp TTHHHHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred CCHHHHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 34444445554 4999999999999987655445778889899999999999864
No 444
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.59 E-value=0.36 Score=47.49 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+.|+|+|+|..|..+|..|+..|.+|.+.|.+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4589999999999999999999999999999874
No 445
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.56 E-value=0.41 Score=43.80 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
++.|+|+|+|..|...+..|.+.|++|.++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3679999999999999999999999999998754
No 446
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.48 E-value=0.21 Score=46.07 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=29.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+++|.|||+|..|...|..|++.|++|.+++ +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 3689999999999999999999999999998 53
No 447
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.39 E-value=0.29 Score=44.71 Aligned_cols=33 Identities=36% Similarity=0.407 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+|+|||+|-.|-+.|..|.+.|.+|+|++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 468999999999999999999999999999875
No 448
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.32 E-value=0.3 Score=48.53 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++|.|||+|..|...|..|++.|++|.+++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999875
No 449
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.16 E-value=0.42 Score=45.43 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.+.|+|+|+|-.|..+|.+|.+.|.+|++.|.+
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4688999999999999999999999999999864
No 450
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.12 E-value=0.32 Score=53.47 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (506)
..+|+|||||..|+=+|..|++.|. +|+|+++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3499999999999999999999997 899999875
No 451
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.08 E-value=0.42 Score=45.07 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=29.5
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 28 SPSVIVIGA-GMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGa-GiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
+.+|+|||+ |..|.++|+.|+..|. +|.++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 468999998 9999999999999985 79999974
No 452
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=89.03 E-value=0.33 Score=48.01 Aligned_cols=36 Identities=28% Similarity=0.453 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC--------------------CC-cEEEEeeCCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDA--------------------SF-KVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~--------------------G~-~V~vlE~~~~ 62 (506)
...+|+|||+|.+|+-+|..|++. |. +|+|+++++.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 357999999999999999999974 64 8999998654
No 453
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=89.00 E-value=0.42 Score=45.15 Aligned_cols=34 Identities=29% Similarity=0.337 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.+.|+|||+|..|.+.|..|++.|++|.+++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999988743
No 454
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.95 E-value=0.45 Score=42.14 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=31.2
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
.+.|+|.|| |-.|...|..|++.|++|.++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 578999998 9999999999999999999998753
No 455
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.90 E-value=0.28 Score=49.10 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHH-HHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVA-AARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~-aA~~L~~~G~~V~vlE~~~ 61 (506)
..++|.|||.|-+|++ +|..|.+.|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 4579999999999997 6999999999999999754
No 456
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.84 E-value=0.29 Score=44.64 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+...++|||+|-+|-++|+.|++.|. +|+|+.++
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35789999999999999999999998 89999875
No 457
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.81 E-value=0.37 Score=45.04 Aligned_cols=33 Identities=27% Similarity=0.491 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
+.+|+|||+|-.|.+.|+.|+..|. .+.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999999885 79999864
No 458
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.81 E-value=0.5 Score=43.93 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+.+.++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46799999999999999999999998 89999875
No 459
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.81 E-value=0.34 Score=43.90 Aligned_cols=30 Identities=27% Similarity=0.211 Sum_probs=27.7
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEee
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (506)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999998754
No 460
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.78 E-value=0.48 Score=42.60 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+. .++|||+|-+|-++++.|++.|. +|+|+.++
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35 89999999999999999999998 89999875
No 461
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.76 E-value=0.3 Score=44.32 Aligned_cols=33 Identities=27% Similarity=0.470 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc-EEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFK-VVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~-V~vlE~~ 60 (506)
+++|.|||+|-.|...|..|++.|++ |.+++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 35899999999999999999999998 8999874
No 462
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=88.73 E-value=0.49 Score=43.00 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+...++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46899999999999999999999996 89999774
No 463
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.67 E-value=0.64 Score=40.62 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHH-HCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGA-GMAGVAAARALH-DASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~-~~G~~V~vlE~~~ 61 (506)
+++.|+|+|| |-.|...|..|+ +.|++|.++.++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3456999995 999999999999 8999999998753
No 464
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.65 E-value=0.37 Score=44.29 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=29.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
...++|+|+|-.|.++|..|++.| +|+|+.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 468999999999999999999999 99999764
No 465
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.44 E-value=0.52 Score=43.06 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+...++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46799999999999999999999996 89999874
No 466
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.44 E-value=0.53 Score=43.09 Aligned_cols=34 Identities=32% Similarity=0.378 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
+...++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 46799999999999999999999998 69999774
No 467
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.42 E-value=0.54 Score=40.94 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=29.2
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 29 PSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
++|+|+|| |..|...+..|++.|++|.++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 36999996 999999999999999999999875
No 468
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=88.13 E-value=0.6 Score=43.96 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+.|.|||.|-.|...|..|+..|.+|.+++++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 45789999999999999999999999999999754
No 469
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=88.10 E-value=0.48 Score=43.26 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
....++|||+|-+|-++|+.|++.|. +|+|+.++
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46799999999999999999999998 89999874
No 470
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.09 E-value=0.43 Score=47.42 Aligned_cols=33 Identities=15% Similarity=0.290 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.+|.|||+|..|...|..|++.|++|.+++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 368999999999999999999999999999975
No 471
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.97 E-value=0.49 Score=44.36 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=30.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC--cEEEEeeC
Q 010587 26 ARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (506)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (506)
+++.+|+|||||-.|.+.|+.|+..+. .+.++|.+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345899999999999999999998876 78999863
No 472
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.93 E-value=0.66 Score=39.79 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=30.4
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 29 PSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+.|+|+|| |..|...+..|.+.|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999998753
No 473
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.93 E-value=0.37 Score=44.22 Aligned_cols=32 Identities=25% Similarity=0.468 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLES 59 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~ 59 (506)
..+|+|||+|-.|..+|..|++.|. +++|+|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~ 68 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDY 68 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECC
Confidence 5799999999999999999999997 7999996
No 474
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=87.91 E-value=0.53 Score=43.00 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=30.3
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCcEEEEee
Q 010587 27 RSPSVIVIGAG-MAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 27 ~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~ 59 (506)
...+++|||+| +.|..+|..|.+.|.+|+|+.+
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs 197 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS 197 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEEC
Confidence 46899999999 6899999999999999999964
No 475
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.85 E-value=0.56 Score=42.46 Aligned_cols=31 Identities=39% Similarity=0.521 Sum_probs=29.4
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 30 SVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+++|||+|-.|.+.|..|.+.|.+|+|++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 476
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.81 E-value=0.6 Score=40.80 Aligned_cols=31 Identities=26% Similarity=0.378 Sum_probs=28.9
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 30 SVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 30 dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+|+|+|| |..|...+..|++.|++|.++.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5999998 999999999999999999999874
No 477
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.77 E-value=0.59 Score=45.14 Aligned_cols=34 Identities=26% Similarity=0.281 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
....|+|||.|..|..+|..|...|.+|.++|.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999999999999999999999999974
No 478
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.76 E-value=0.57 Score=43.87 Aligned_cols=33 Identities=27% Similarity=0.538 Sum_probs=30.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEee
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLES 59 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~ 59 (506)
+..+|+|||+|=.|..+|..|+..|. +++|+|.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~ 66 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 66 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecC
Confidence 36899999999999999999999998 6999986
No 479
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=87.67 E-value=0.52 Score=47.09 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=32.1
Q ss_pred CCCCCeEEEECCCHHHHH-HHHHHHHCCCcEEEEeeCC
Q 010587 25 QARSPSVIVIGAGMAGVA-AARALHDASFKVVLLESRD 61 (506)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~-aA~~L~~~G~~V~vlE~~~ 61 (506)
+...+.|.|||-|-+|++ +|..|.+.|++|.+.|...
T Consensus 16 ~~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 53 (491)
T 2f00_A 16 MRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 53 (491)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cccCCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCC
Confidence 344578999999999998 8899999999999999754
No 480
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.48 E-value=0.65 Score=46.03 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
....|+|||.|..|..+|..|...|.+|+++|.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999974
No 481
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=87.42 E-value=0.59 Score=42.74 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=29.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCcEEEEee
Q 010587 27 RSPSVIVIGA-GMAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~ 59 (506)
..++++|||+ |+.|..+|..|.+.|.+|+|+.+
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~ 197 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHS 197 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 4689999995 57999999999999999999986
No 482
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.31 E-value=0.58 Score=45.40 Aligned_cols=34 Identities=29% Similarity=0.510 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
....|+|||+|-.|..+|..|...|. +|++++++
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45789999999999999999999998 89999875
No 483
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.30 E-value=0.52 Score=43.33 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeeC
Q 010587 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESR 60 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~ 60 (506)
+++|.|||+|..|.+.|..|++. |.+|.+++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 46899999999999999999988 5789998864
No 484
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=87.26 E-value=0.73 Score=42.76 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (506)
....++|+|+|=+|-++|+.|++.|. +|+|+.++
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46799999999999999999999998 79999875
No 485
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.21 E-value=0.53 Score=42.29 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEee
Q 010587 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLES 59 (506)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~ 59 (506)
..+|+|||+|-.|..+|..|++.|. +++|+|.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~ 60 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD 60 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeC
Confidence 5799999999999999999999998 7899986
No 486
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.13 E-value=0.77 Score=42.26 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=30.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 29 PSVIVIGA-GMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
++|+|.|| |..|...+.+|.++|++|+++-+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46999998 99999999999999999999977543
No 487
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=87.06 E-value=0.69 Score=44.35 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=30.8
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 28 SPSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 28 ~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
++.|+|.|| |..|...+..|++.|++|.++.++.
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 368999998 9999999999999999999998754
No 488
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=87.04 E-value=0.6 Score=42.07 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=29.9
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCcEEEEee
Q 010587 27 RSPSVIVIGAG-MAGVAAARALHDASFKVVLLES 59 (506)
Q Consensus 27 ~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~ 59 (506)
..++++|||+| +.|..+|..|.+.|.+|+++.+
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~ 182 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS 182 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999976 7999999999999999999975
No 489
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=86.98 E-value=0.12 Score=44.80 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
+.++|.|||+|-.|...|..|.+.|++|.+++++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 45689999999999999999999999999998754
No 490
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.00 E-value=0.69 Score=43.44 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..+.|.|||.|-.|...|..|+..|.+|.+++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45789999999999999999999999999999754
No 491
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=87.00 E-value=0.66 Score=45.12 Aligned_cols=32 Identities=34% Similarity=0.533 Sum_probs=29.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEe
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASF---KVVLLE 58 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~---~V~vlE 58 (506)
+..+|+|+|||-+|.++|..|.+.|. +|.|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 35789999999999999999999998 799998
No 492
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=86.93 E-value=0.56 Score=43.36 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
.+.+|.+||=|..|...|..|.++|++|+|++++
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3568999999999999999999999999999975
No 493
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=86.82 E-value=0.66 Score=42.11 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=30.4
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAG-MAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
...+++|||+| +.|..+|..|.+.|.+|+++.+.
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46899999999 57999999999999999999743
No 494
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=86.74 E-value=0.54 Score=43.80 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=29.3
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCC--CcEEEEeeCC
Q 010587 29 PSVIVIGA-GMAGVAAARALHDAS--FKVVLLESRD 61 (506)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G--~~V~vlE~~~ 61 (506)
++|+|||| |..|.+.|+.|++.| ..|.++|.+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 999999999999988 5799999854
No 495
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.57 E-value=0.49 Score=44.46 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=30.4
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCC-------cEEEEeeC
Q 010587 26 ARSPSVIVIGA-GMAGVAAARALHDASF-------KVVLLESR 60 (506)
Q Consensus 26 ~~~~dv~IIGa-GiaGL~aA~~L~~~G~-------~V~vlE~~ 60 (506)
.++++|+|+|| |..|...+..|.+.|+ +|.++|..
T Consensus 2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 34568999998 9999999999999986 79999864
No 496
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=86.55 E-value=0.81 Score=41.97 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=30.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIG-AGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIG-aGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
+.+.++|+| +|-.|.++|..|++.|.+|.++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 347899999 9999999999999999999999874
No 497
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.54 E-value=0.75 Score=44.49 Aligned_cols=34 Identities=29% Similarity=0.325 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (506)
..+.|+|||.|..|..+|..|...|.+|.++|.+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3589999999999999999999999999999974
No 498
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=86.47 E-value=0.77 Score=42.62 Aligned_cols=36 Identities=25% Similarity=0.360 Sum_probs=31.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 27 RSPSVIVIGA-GMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
+++.|+|.|| |..|...+..|.+.|++|.++.++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4678999999 99999999999999999999987543
No 499
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=86.43 E-value=0.69 Score=43.60 Aligned_cols=37 Identities=27% Similarity=0.304 Sum_probs=30.6
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCcEEEEeeCCC
Q 010587 26 ARSPSVIVIGA-GMAGVAAARALHDASFKVVLLESRDR 62 (506)
Q Consensus 26 ~~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (506)
.+.+.|+|.|| |..|...+..|++.|++|.++.++..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 45688999999 99999999999999999999988653
No 500
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=86.39 E-value=0.79 Score=43.02 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 010587 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (506)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (506)
..++|.|||.|-.|...|..|+..|.+|.+++++.
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~ 197 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSK 197 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 45789999999999999999999999999999764
Done!