Query 010590
Match_columns 506
No_of_seqs 488 out of 5785
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 10:04:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010590.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010590hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 3.8E-31 1.3E-35 253.1 9.6 180 251-474 52-236 (253)
2 2vge_A RELA-associated inhibit 100.0 9.1E-31 3.1E-35 246.8 11.6 180 251-476 16-203 (229)
3 4gpm_A Engineered protein OR26 100.0 1.3E-29 4.4E-34 227.1 17.3 122 258-400 6-132 (169)
4 4b93_B Ankyrin repeat domain-c 100.0 5E-31 1.7E-35 254.8 8.3 107 253-362 49-161 (269)
5 2xai_A ASB-9, ankyrin repeat a 100.0 1.3E-30 4.6E-35 250.6 11.1 109 250-362 30-143 (261)
6 1oy3_D Transcription factor in 100.0 7.8E-31 2.7E-35 254.1 9.5 177 251-472 40-269 (282)
7 3b7b_A Euchromatic histone-lys 100.0 1.3E-30 4.6E-35 246.2 10.6 178 252-473 40-222 (237)
8 2dzn_A Probable 26S proteasome 100.0 1.8E-30 6E-35 243.8 11.1 178 251-472 31-219 (228)
9 1oy3_D Transcription factor in 100.0 8.2E-31 2.8E-35 254.0 8.9 180 250-473 3-237 (282)
10 2rfa_A Transient receptor pote 100.0 3.6E-30 1.2E-34 242.6 11.4 178 255-474 2-210 (232)
11 3aji_A 26S proteasome non-ATPa 100.0 3.3E-30 1.1E-34 242.6 10.5 179 250-473 34-217 (231)
12 2f8y_A Notch homolog 1, transl 100.0 1.1E-29 3.7E-34 237.7 11.9 180 251-474 20-204 (223)
13 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-29 3.7E-34 240.3 11.5 196 252-473 5-228 (241)
14 3d9h_A CDNA FLJ77766, highly s 100.0 1E-29 3.6E-34 247.7 11.5 173 252-471 88-265 (285)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 2.5E-30 8.5E-35 247.4 6.7 178 251-473 5-202 (253)
16 3ljn_A Hypothetical protein; a 100.0 5.2E-30 1.8E-34 258.5 9.2 180 249-473 46-256 (364)
17 1wdy_A 2-5A-dependent ribonucl 100.0 2.7E-29 9.3E-34 243.1 12.7 196 253-474 36-266 (285)
18 1s70_B 130 kDa myosin-binding 100.0 3.4E-30 1.2E-34 252.3 6.3 195 250-471 34-275 (299)
19 3b7b_A Euchromatic histone-lys 100.0 2.3E-29 7.7E-34 237.8 11.8 179 250-473 5-189 (237)
20 3utm_A Tankyrase-1; tankyrase, 100.0 4.2E-29 1.4E-33 249.4 13.5 233 214-473 15-292 (351)
21 3hra_A Ankyrin repeat family p 100.0 3.6E-29 1.2E-33 230.2 11.8 183 253-474 2-191 (201)
22 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-28 3.6E-33 237.3 15.2 178 249-472 62-249 (261)
23 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-28 4.3E-33 245.7 15.0 196 253-474 22-286 (337)
24 4b93_B Ankyrin repeat domain-c 100.0 1.9E-29 6.6E-34 243.6 8.4 197 250-473 5-230 (269)
25 1ikn_D Protein (I-kappa-B-alph 100.0 4.7E-30 1.6E-34 242.6 4.0 210 220-472 5-230 (236)
26 2dzn_A Probable 26S proteasome 100.0 4.7E-29 1.6E-33 234.0 10.6 174 256-473 2-186 (228)
27 3d9h_A CDNA FLJ77766, highly s 100.0 5.9E-29 2E-33 242.4 10.9 177 250-473 53-234 (285)
28 3kea_A K1L; tropism, ANK repea 100.0 7.1E-30 2.4E-34 248.9 4.0 178 250-473 25-207 (285)
29 1n11_A Ankyrin; clathrin, BAND 100.0 2.9E-28 9.8E-33 251.8 15.7 207 251-473 141-389 (437)
30 2etb_A Transient receptor pote 100.0 2.8E-29 9.5E-34 240.3 7.1 177 256-474 2-234 (256)
31 3aji_A 26S proteasome non-ATPa 100.0 1.1E-28 3.7E-33 232.1 11.0 176 254-473 4-184 (231)
32 2pnn_A Transient receptor pote 100.0 1.1E-30 3.7E-35 252.7 -2.9 215 250-502 7-273 (273)
33 1wdy_A 2-5A-dependent ribonucl 100.0 2E-28 6.8E-33 237.0 13.0 197 254-473 3-231 (285)
34 1n11_A Ankyrin; clathrin, BAND 100.0 2.6E-28 8.8E-33 252.2 13.8 156 253-422 209-384 (437)
35 3utm_A Tankyrase-1; tankyrase, 100.0 5.6E-28 1.9E-32 241.3 14.8 209 219-471 54-323 (351)
36 4gpm_A Engineered protein OR26 100.0 1E-27 3.5E-32 214.7 14.9 130 250-400 31-165 (169)
37 1ikn_D Protein (I-kappa-B-alph 99.9 9.5E-28 3.2E-32 226.8 15.1 180 251-474 3-197 (236)
38 2fo1_E LIN-12 protein; beta-ba 99.9 1.3E-28 4.5E-33 249.3 8.8 216 220-473 91-325 (373)
39 2fo1_E LIN-12 protein; beta-ba 99.9 1.3E-28 4.4E-33 249.4 8.3 209 221-474 123-359 (373)
40 3eu9_A Huntingtin-interacting 99.9 5.2E-28 1.8E-32 228.1 11.8 180 251-473 37-222 (240)
41 2rfm_A Putative ankyrin repeat 99.9 1.9E-27 6.4E-32 217.4 13.4 130 250-400 29-163 (192)
42 1awc_B Protein (GA binding pro 99.9 6.4E-27 2.2E-31 205.8 15.6 124 256-400 2-129 (153)
43 3jxi_A Vanilloid receptor-rela 99.9 8.3E-29 2.8E-33 237.5 3.3 187 253-474 2-238 (260)
44 3ljn_A Hypothetical protein; a 99.9 4.1E-28 1.4E-32 244.6 7.4 180 249-473 13-223 (364)
45 3v31_A Ankyrin repeat family A 99.9 7.1E-27 2.4E-31 208.5 14.4 125 255-400 2-131 (167)
46 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.9E-26 6.5E-31 206.4 16.9 129 251-400 9-142 (169)
47 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.7E-27 9.4E-32 224.4 9.6 182 253-474 2-194 (239)
48 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.5E-26 8.5E-31 203.7 14.8 121 254-396 3-128 (162)
49 3twr_A Tankyrase-2; ankyrin re 99.9 5E-26 1.7E-30 202.6 15.8 140 252-422 4-148 (165)
50 1sw6_A Regulatory protein SWI6 99.9 4.2E-28 1.5E-32 241.1 2.1 186 257-472 98-327 (327)
51 3v30_A DNA-binding protein rfx 99.9 5.9E-27 2E-31 210.1 8.5 164 256-464 2-171 (172)
52 4hbd_A KN motif and ankyrin re 99.9 2.9E-26 1E-30 222.2 13.9 130 250-400 105-246 (276)
53 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.3E-26 2.5E-30 199.4 14.7 122 255-398 1-127 (156)
54 1k1a_A B-cell lymphoma 3-encod 99.9 2.2E-25 7.5E-30 210.6 18.7 144 249-423 72-224 (241)
55 3f6q_A Integrin-linked protein 99.9 3.9E-26 1.3E-30 206.3 12.6 139 254-423 3-146 (179)
56 4g8k_A 2-5A-dependent ribonucl 99.9 2.3E-26 7.9E-31 229.3 11.5 267 139-474 27-314 (337)
57 2rfa_A Transient receptor pote 99.9 3.9E-26 1.3E-30 214.8 12.1 149 249-423 30-205 (232)
58 1s70_B 130 kDa myosin-binding 99.9 2.8E-25 9.7E-30 217.2 16.0 143 250-423 67-273 (299)
59 1bi7_B P16INK4A, MTS1, multipl 99.9 4E-26 1.4E-30 201.5 8.8 135 251-407 7-147 (156)
60 1d9s_A Cyclin-dependent kinase 99.9 9.3E-26 3.2E-30 194.3 10.4 125 250-396 6-136 (136)
61 3htm_A Speckle-type POZ protei 99.9 8.7E-26 3E-30 202.9 10.4 148 6-199 16-163 (172)
62 2etb_A Transient receptor pote 99.9 3.1E-26 1.1E-30 219.1 7.3 143 252-424 39-230 (256)
63 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-25 4.2E-30 213.0 11.1 189 252-472 33-229 (239)
64 2f8y_A Notch homolog 1, transl 99.9 2.5E-25 8.4E-30 207.9 13.0 171 222-423 24-199 (223)
65 3hra_A Ankyrin repeat family p 99.9 3E-25 1E-29 203.9 12.5 147 250-423 33-186 (201)
66 2pnn_A Transient receptor pote 99.9 3.1E-26 1.1E-30 221.3 6.0 148 251-423 49-241 (273)
67 3hve_A Gigaxonin; ubiquitin, c 99.9 2.4E-25 8.3E-30 213.2 11.9 171 5-219 12-184 (256)
68 3v30_A DNA-binding protein rfx 99.9 4.8E-25 1.6E-29 197.6 12.8 136 249-405 29-169 (172)
69 2jab_A H10-2-G3; HER2, darpin, 99.9 2.4E-24 8.3E-29 185.4 14.9 123 251-394 9-136 (136)
70 3i3n_A Kelch-like protein 11; 99.9 4.4E-25 1.5E-29 214.1 11.2 149 5-199 13-170 (279)
71 2if5_A Zinc finger and BTB dom 99.9 7.2E-25 2.4E-29 184.6 11.1 114 5-161 6-119 (120)
72 3t8k_A Uncharacterized protein 99.9 1.8E-25 6.3E-30 203.3 7.5 130 255-400 5-150 (186)
73 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.2E-24 1.5E-28 180.4 14.3 121 255-396 1-126 (126)
74 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.2E-24 7.5E-29 191.1 13.0 125 250-396 32-162 (162)
75 3kea_A K1L; tropism, ANK repea 99.9 2E-25 7E-30 217.3 6.7 159 255-459 61-226 (285)
76 2rfm_A Putative ankyrin repeat 99.9 3.8E-24 1.3E-28 195.4 14.8 154 220-394 32-190 (192)
77 3jxi_A Vanilloid receptor-rela 99.9 1.7E-25 5.7E-30 214.5 5.7 158 252-424 42-234 (260)
78 3v31_A Ankyrin repeat family A 99.9 3.1E-24 1.1E-28 191.3 13.5 131 249-400 29-164 (167)
79 1sw6_A Regulatory protein SWI6 99.9 4.6E-25 1.6E-29 219.2 8.3 157 252-423 127-324 (327)
80 1r29_A B-cell lymphoma 6 prote 99.9 4.4E-24 1.5E-28 181.6 12.7 114 5-162 10-124 (127)
81 3b84_A Zinc finger and BTB dom 99.9 1.5E-24 5.2E-29 182.1 9.6 111 5-162 5-115 (119)
82 3f6q_A Integrin-linked protein 99.9 2.6E-24 8.9E-29 194.2 11.6 134 250-404 33-171 (179)
83 2ppi_A Gigaxonin; BTB domain, 99.9 1.8E-24 6.2E-29 187.8 9.3 116 5-161 28-143 (144)
84 1buo_A POZ domain, protein (pr 99.9 3.8E-24 1.3E-28 180.3 10.8 112 5-164 9-120 (121)
85 3twr_A Tankyrase-2; ankyrin re 99.9 3.6E-24 1.2E-28 190.5 11.1 124 250-395 36-164 (165)
86 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.3E-23 4.4E-28 187.9 14.5 123 251-394 42-169 (169)
87 4eoz_A Speckle-type POZ protei 99.9 4E-25 1.4E-29 192.7 4.1 137 7-189 8-144 (145)
88 2vge_A RELA-associated inhibit 99.9 3.9E-24 1.4E-28 201.3 10.0 149 284-473 20-168 (229)
89 3eu9_A Huntingtin-interacting 99.9 2E-23 7E-28 196.5 14.7 171 221-423 40-218 (240)
90 2vpk_A Myoneurin; transcriptio 99.9 1.1E-23 3.9E-28 176.0 11.1 111 5-162 3-115 (116)
91 1awc_B Protein (GA binding pro 99.9 4.6E-23 1.6E-27 181.0 14.6 118 252-390 30-152 (153)
92 2z8h_A Transcription regulator 99.9 9.6E-24 3.3E-28 182.1 9.9 115 5-164 17-132 (138)
93 2yy9_A Zinc finger and BTB dom 99.9 5.5E-24 1.9E-28 182.8 8.2 115 4-165 5-119 (135)
94 3hqi_A Speckle-type POZ protei 99.9 8.2E-24 2.8E-28 208.6 10.6 147 7-199 157-303 (312)
95 2q81_A MIZ-1 protein; BTB/POZ 99.9 1.1E-23 3.7E-28 176.9 8.7 109 5-161 8-116 (119)
96 2ihc_A Transcription regulator 99.9 2.6E-24 8.8E-29 182.1 4.5 112 5-161 10-122 (124)
97 3aaa_C Myotrophin, protein V-1 99.9 5.9E-23 2E-27 173.4 12.3 108 252-362 3-115 (123)
98 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.4E-23 2.9E-27 179.7 13.2 121 250-393 30-155 (156)
99 3c5r_A BARD-1, BRCA1-associate 99.9 7.9E-24 2.7E-28 182.3 6.3 109 251-362 5-118 (137)
100 3ohu_A Transcription regulator 99.9 4E-24 1.4E-28 181.3 4.2 110 5-159 13-123 (125)
101 2vkp_A BTB/POZ domain-containi 99.9 3.3E-23 1.1E-27 171.2 9.6 102 18-163 2-107 (109)
102 3ehr_A Osteoclast-stimulating 99.9 1.3E-23 4.6E-28 196.4 8.0 134 251-405 68-207 (222)
103 3t8k_A Uncharacterized protein 99.9 1.4E-23 4.6E-28 190.9 6.3 127 254-401 36-184 (186)
104 2jab_A H10-2-G3; HER2, darpin, 99.9 2E-22 6.8E-27 173.4 13.1 98 283-400 12-109 (136)
105 3ui2_A Signal recognition part 99.9 1.1E-24 3.9E-29 207.1 -1.5 107 253-362 42-153 (244)
106 1d9s_A Cyclin-dependent kinase 99.9 6.5E-23 2.2E-27 176.4 8.7 98 282-400 9-107 (136)
107 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-23 4E-28 185.6 3.6 143 282-469 9-152 (156)
108 2b0o_E UPLC1; arfgap, structur 99.9 4.3E-22 1.5E-26 195.2 14.2 133 254-424 149-295 (301)
109 3deo_A Signal recognition part 99.9 1.3E-22 4.4E-27 183.9 9.8 109 252-363 40-153 (183)
110 3ga1_A Nucleus accumbens-assoc 99.9 4.6E-23 1.6E-27 175.7 6.3 112 5-163 14-126 (129)
111 4hbd_A KN motif and ankyrin re 99.9 5.1E-22 1.8E-26 192.3 14.0 155 219-394 107-273 (276)
112 3ui2_A Signal recognition part 99.9 1.2E-22 4.2E-27 193.0 9.3 139 221-398 43-187 (244)
113 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.1E-22 2.4E-26 158.0 12.2 93 284-396 1-93 (93)
114 3c5r_A BARD-1, BRCA1-associate 99.9 5.2E-22 1.8E-26 170.8 12.1 111 282-423 7-117 (137)
115 3aaa_C Myotrophin, protein V-1 99.9 5.8E-22 2E-26 167.3 10.8 110 282-422 4-113 (123)
116 3fkc_A Transcriptional regulat 99.9 1.9E-22 6.6E-27 168.2 7.7 103 5-155 12-115 (116)
117 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.2E-21 7.4E-26 163.6 13.7 97 284-400 1-97 (126)
118 3ehr_A Osteoclast-stimulating 99.9 5.7E-22 2E-26 185.3 10.8 108 284-422 72-180 (222)
119 3deo_A Signal recognition part 99.9 3.5E-22 1.2E-26 181.0 8.8 128 284-473 43-171 (183)
120 3lvq_E ARF-GAP with SH3 domain 99.8 4.3E-21 1.5E-25 201.4 14.4 127 257-404 133-273 (497)
121 1dcq_A PYK2-associated protein 99.8 8.7E-21 3E-25 183.7 15.3 121 255-396 129-263 (278)
122 2aja_A Ankyrin repeat family p 99.8 1.8E-23 6E-28 210.7 -4.0 165 254-475 90-268 (376)
123 3m5b_A Zinc finger and BTB dom 99.8 1.6E-21 5.5E-26 163.1 7.3 104 5-162 13-116 (119)
124 3jue_A Arfgap with coiled-coil 99.8 2.2E-20 7.4E-25 187.5 14.6 141 253-422 196-344 (368)
125 2b0o_E UPLC1; arfgap, structur 99.8 9.1E-22 3.1E-26 192.8 4.1 140 285-474 151-299 (301)
126 2l6b_A NR1C; ankyrin, consensu 99.8 7.2E-21 2.5E-25 158.4 7.8 105 282-406 6-110 (115)
127 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.1E-20 1.1E-24 148.4 10.4 88 255-345 1-93 (93)
128 2l6b_A NR1C; ankyrin, consensu 99.8 8E-21 2.7E-25 158.1 5.8 105 250-357 3-112 (115)
129 2aja_A Ankyrin repeat family p 99.8 1.8E-21 6.2E-26 196.0 -0.3 124 251-402 123-256 (376)
130 1dcq_A PYK2-associated protein 99.8 1.8E-18 6.1E-23 167.4 16.4 143 250-423 60-246 (278)
131 3jue_A Arfgap with coiled-coil 99.8 1.6E-18 5.4E-23 173.9 12.4 149 283-472 197-348 (368)
132 3lvq_E ARF-GAP with SH3 domain 99.8 2.4E-19 8.1E-24 188.1 6.4 108 285-423 132-248 (497)
133 2zgd_A 3 repeat synthetic anky 99.8 4.8E-18 1.6E-22 140.2 11.3 80 281-362 20-99 (110)
134 2zgd_A 3 repeat synthetic anky 99.7 9.7E-17 3.3E-21 132.3 10.0 91 246-339 14-109 (110)
135 2ast_A S-phase kinase-associat 99.3 4.1E-12 1.4E-16 111.3 8.6 125 27-178 3-139 (159)
136 4ajy_C Transcription elongatio 99.1 1.3E-10 4.6E-15 92.6 8.0 57 27-104 4-63 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 98.8 1.1E-08 3.7E-13 87.4 8.3 120 27-177 4-133 (141)
138 2p1m_A SKP1-like protein 1A; F 98.7 4.2E-09 1.4E-13 92.0 2.0 122 27-178 6-138 (160)
139 3drz_A BTB/POZ domain-containi 98.0 3.5E-05 1.2E-09 62.1 10.3 97 27-162 8-105 (107)
140 1hv2_A Elongin C, ELC1; protei 98.0 2E-05 6.8E-10 62.5 8.6 90 27-149 6-98 (99)
141 2fnj_C Transcription elongatio 98.0 1E-05 3.5E-10 63.8 6.4 90 27-149 3-95 (96)
142 3v7d_A Suppressor of kinetocho 97.9 8.2E-05 2.8E-09 65.1 10.6 130 26-178 8-146 (169)
143 1vcb_B Protein (elongin C); tu 97.1 0.00052 1.8E-08 55.5 4.7 90 27-149 19-111 (112)
144 3drx_A BTB/POZ domain-containi 96.8 0.0047 1.6E-07 54.9 8.7 97 27-162 14-111 (202)
145 3kvt_A Potassium channel prote 93.7 0.067 2.3E-06 43.2 4.6 84 27-152 7-91 (115)
146 1s1g_A Potassium voltage-gated 91.7 0.32 1.1E-05 39.7 6.1 86 26-153 14-99 (124)
147 1t1d_A Protein (potassium chan 89.5 0.18 6.1E-06 39.5 2.5 85 27-153 3-89 (100)
148 2nz0_B Potassium voltage-gated 87.7 0.5 1.7E-05 39.4 4.2 86 26-153 36-121 (140)
149 1nn7_A Potassium channel KV4.2 82.2 0.59 2E-05 36.9 2.0 85 27-153 2-86 (105)
150 2eqx_A Kelch repeat and BTB do 81.6 4.6 0.00016 31.5 7.2 48 131-178 13-80 (105)
151 2eqx_A Kelch repeat and BTB do 51.3 6.9 0.00024 30.4 2.0 33 167-199 7-39 (105)
152 3i3n_A Kelch-like protein 11; 45.4 4.4 0.00015 37.8 -0.0 42 115-160 125-166 (279)
153 3hve_A Gigaxonin; ubiquitin, c 43.5 3.4 0.00012 38.0 -1.1 40 115-161 117-159 (256)
154 2r9r_B Paddle chimera voltage 39.5 21 0.0007 36.6 3.9 86 27-153 54-140 (514)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=3.8e-31 Score=253.11 Aligned_cols=180 Identities=17% Similarity=0.155 Sum_probs=157.4
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
..|..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|++.|+.+++.++ ..|+||||
T Consensus 52 ~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~ 129 (253)
T 1yyh_A 52 QTDRTGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLI 129 (253)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-TTCCCHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHH
Confidence 35788999999999999999999999 667655 489999999999999999999999876899998 89999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCC
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGIL 405 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~ 405 (506)
+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~~----- 186 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA------------------VNNVDAAVVLLKNGANKDMQ----- 186 (253)
T ss_dssp HHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHH------------------HTCHHHHHHHHHTTCCTTCC-----
T ss_pred HHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCCCCc-----
Confidence 9999999999999999999999999999999999998 68899999999999999987
Q ss_pred CCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 406 NEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 406 ~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
+..|.||||+|+... ...++++++ +.++++|.+|..|+||||+|++.|..
T Consensus 187 ------~~~g~tpL~~A~~~~-----------~~~~v~~Ll--~~ga~~~~~d~~g~tpl~~A~~~g~~ 236 (253)
T 1yyh_A 187 ------NNREETPLFLAAREG-----------SYETAKVLL--DHFANRDITDHMDRLPRDIAQERMHH 236 (253)
T ss_dssp ------CTTSCCHHHHHHHHT-----------CHHHHHHHH--HTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred ------CCCCCCHHHHHHHCC-----------CHHHHHHHH--HcCCCccccccCCCCHHHHHHHcCCH
Confidence 556779999985322 223344455 34578999999999999999999954
No 2
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=9.1e-31 Score=246.81 Aligned_cols=180 Identities=20% Similarity=0.175 Sum_probs=152.4
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
..+..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.++|++|++.|+ ++|.+| ..|+||||
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~n~~d-~~g~tpLh 92 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAV-KEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGA-NVNSPD-SHGWTPLH 92 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHH-HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTCCCHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCC-CCCCCHHH
Confidence 45678899999999999999999999 555544 58999999999999999999999999 999999 89999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHH--HHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccccc
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRT-VDGVTPLDIL--RTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREE 402 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpLh~A--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~ 402 (506)
+|+..|+.+++++|+++|++++.++ ..|+||||+| +. .++.+++++|++.|++++.+|
T Consensus 93 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~------------------~~~~~~v~~Ll~~ga~~~~~~- 153 (229)
T 2vge_A 93 CAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYR------------------EGYADCATYLADVEQSMGLMN- 153 (229)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTS------------------TTHHHHHHHHHHHHHHTTTSG-
T ss_pred HHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHh------------------cChHHHHHHHHHcCCCccccc-
Confidence 9999999999999999999999997 6999999999 54 789999999999999999984
Q ss_pred CCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCCCC
Q 010590 403 GILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSSRM 476 (506)
Q Consensus 403 ~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~~~ 476 (506)
..+.||++.++... ...+++......++|.+|..|+||||+|++.|....
T Consensus 154 ----------~~~~~~l~~~~~~~--------------~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 154 ----------SGAVYALWDYSAEF--------------GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp ----------GGEEEESSCBCCSS--------------TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEE
T ss_pred ----------CCchHHHHHHhhcc--------------ccccCccccccccccccCCCcccHHHHHHHcCCcce
Confidence 45667887652211 112223223335699999999999999999996443
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.3e-29 Score=227.10 Aligned_cols=122 Identities=34% Similarity=0.457 Sum_probs=112.4
Q ss_pred HHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCC
Q 010590 258 RRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVS 332 (506)
Q Consensus 258 t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~ 332 (506)
++|+.||..|+.++|+.|| +.|+|+ +|+||||+|+..++.+++++|++.|+ +++.+| ..|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll-~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga-d~~~~d-~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNAKD-SDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc-chhhhc-cCCCCHHHHHHHcCC
Confidence 5799999999999999999 677766 48999999999999999999999999 999998 899999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 333 PDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 333 ~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
.+++++|+++|+|+|.+|.+|+||||+|+. .++.+++++|++.|++++.+
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~------------------~g~~~~v~~Ll~~gad~~~~ 132 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAE------------------NGHKEVVKLLISKGADVNTS 132 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCcccc
Confidence 999999999999999999999999999998 78999999999988877654
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=5e-31 Score=254.80 Aligned_cols=107 Identities=23% Similarity=0.337 Sum_probs=42.0
Q ss_pred CccccHHHHHHHhcCCH-HHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 253 EDQKIRRMRRALDSSDV-ELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
+..|.||||+|+..+.. .++++|+ +.|+|+ +|+||||+|+..|+.++|++|++.|+ +++.++ ..|.||||+
T Consensus 49 ~~~~~t~L~~a~~~~~~~~~v~~Ll-~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a-~~~~~~-~~g~t~l~~ 125 (269)
T 4b93_B 49 DPEFCHPLCQCPKCAPAQKRLAKVP-ASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGA-NAGARN-ADQAVPLHL 125 (269)
T ss_dssp ---------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTC-CTTCCC-TTCCCHHHH
T ss_pred CccCCCHHHHHHHhCCHHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC-CcCccC-CCCCCcccc
Confidence 34445555555544443 2444444 344333 24555555555555555555555555 555554 455555555
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT 362 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~ 362 (506)
|+..++.+++++|+++|+++|.+|..|+||||+|+.
T Consensus 126 a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 126 ACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred ccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 555555555555555555555555555555555554
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=250.57 Aligned_cols=109 Identities=21% Similarity=0.217 Sum_probs=88.0
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...|..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.. ..|+|||
T Consensus 30 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~--~~g~t~L 105 (261)
T 2xai_A 30 NIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA-SVQPE--SDLASPI 105 (261)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSSCS--CTTCCHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCC--CCCCCHH
Confidence 345677888888888888888888888 556544 47888888888888888888888888 88754 3688888
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT 362 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~ 362 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 143 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACE 143 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 88888888888888888888888888888888888885
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=7.8e-31 Score=254.11 Aligned_cols=177 Identities=19% Similarity=0.103 Sum_probs=114.3
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCC--------------
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAAD-------------- 311 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~-------------- 311 (506)
..+..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~ 117 (282)
T 1oy3_D 40 LQNDLGQTALHLAAILGEASTVEKLY-AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP-SHPRDASDTYLTQSQ 117 (282)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCC-SSCCCC---------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCC-CCchhhHHHHhhccc
Confidence 44566777777777777777777777 455544 36677777777777777777777664 3
Q ss_pred ---------------------------------CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC-CCcHH
Q 010590 312 ---------------------------------VNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVD-GVTPL 357 (506)
Q Consensus 312 ---------------------------------v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~-g~tpL 357 (506)
++.++ ..|+||||+|+..|+.+++++|+++|++++.++.. |+|||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 196 (282)
T 1oy3_D 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN-YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPL 196 (282)
T ss_dssp --------------------------CCCGGGGTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcC-CCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHH
Confidence 55555 66777777777777777777777777777776643 77777
Q ss_pred HHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCc
Q 010590 358 DILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSA 437 (506)
Q Consensus 358 h~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~ 437 (506)
|+|+. .++.+++++|+++|++++.+ +..|.||||+|+.. +
T Consensus 197 ~~A~~------------------~~~~~~v~~Ll~~gad~~~~-----------d~~g~tpL~~A~~~-----------~ 236 (282)
T 1oy3_D 197 HLAVE------------------AQAASVLELLLKAGADPTAR-----------MYGGRTPLGSALLR-----------P 236 (282)
T ss_dssp HHHHH------------------TTCHHHHHHHHHTTCCTTCC-----------CTTSCCHHHHHHTS-----------S
T ss_pred HHHHH------------------cCCHHHHHHHHHcCCCCccc-----------ccCCCCHHHHHHHc-----------C
Confidence 77776 67889999999999998887 45677999998432 2
Q ss_pred cccccccccCCCcceeeccCCCCCCCcchhhhhcC
Q 010590 438 TINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMG 472 (506)
Q Consensus 438 ~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~g 472 (506)
...++++++ ..++++|.+|.+|+|||++|....
T Consensus 237 ~~~~v~~Ll--~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 237 NPILARLLR--AHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CHHHHHHHH--HTTCCCCCCC--------------
T ss_pred CcHHHHHHH--HcCCCcCcCCCcccccccccCCcc
Confidence 233445555 355889999999999999998766
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=1.3e-30 Score=246.23 Aligned_cols=178 Identities=21% Similarity=0.219 Sum_probs=121.6
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.+..|.||||+|+..|+.+++++|+ +.|+++ .|.||||+|+..|+.+++++|++.|..+++..+ ..|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~ 117 (237)
T 3b7b_A 40 CSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQD-DGGWTPMIW 117 (237)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCC-TTSCCHHHH
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCCHHHH
Confidence 3455666666666666666666666 444433 356666666666666666666666622666665 566666666
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCC
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILN 406 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~ 406 (506)
|+..|+.+++++|+++|++++.+|..|.||||+|+. .++.+++++|++.|++++.+
T Consensus 118 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~~~~Ll~~g~~~~~~------ 173 (237)
T 3b7b_A 118 ATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF------------------SGCVDIAEILLAAKCDLHAV------ 173 (237)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------HCCHHHHHHHHTTTCCTTCC------
T ss_pred HHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH------------------CCCHHHHHHHHHcCCCCCCc------
Confidence 666666666666666666666666666666666665 57788899999999888877
Q ss_pred CCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 407 EPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 407 ~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+..|.||||+|+.. +....+.+++ ..+.++|.+|.+|+||||+|+..|.
T Consensus 174 -----~~~g~t~L~~A~~~-----------~~~~~v~~Ll--~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 174 -----NIHGDSPLHIAARE-----------NRYDCVVLFL--SRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp -----CTTCCCHHHHHHHT-----------TCHHHHHHHH--TTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred -----CCCCCCHHHHHHHh-----------CCHhHHHHHH--HcCCCCCccCCCCCCHHHHHHHHHH
Confidence 55677999998432 2233344455 3458899999999999999999884
No 8
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.8e-30 Score=243.77 Aligned_cols=178 Identities=16% Similarity=0.102 Sum_probs=154.4
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCC--C------CCCChHHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCC
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEG--L------NLDEALALHYAVENCSREVVKALLELG--AADVNYPAGPAG 320 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g--~~~v~~~~~~~g 320 (506)
..|..|.||||+|+..|+.+++++|+ +.| + +..|+||||+|+..|+.+++++|+++| + +++.++ ..|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~-~~g 107 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLL-SKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKP-DLNKIT-NQG 107 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHH-HTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCC-CTTCCC-TTC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHH-hccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-ccccCC-cCC
Confidence 35889999999999999999999999 555 3 336899999999999999999999999 7 899998 899
Q ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhc-cCccc
Q 010590 321 KTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSA-ALVLS 399 (506)
Q Consensus 321 ~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~g-a~~~~ 399 (506)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.| ++++.
T Consensus 108 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 108 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAAS------------------VGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH------------------TTCHHHHHHHHTTTCCCSCC
T ss_pred CCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHH------------------cCCHHHHHHHHhcCcccccC
Confidence 999999999999999999999999999999999999999998 78999999999999 88888
Q ss_pred cccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcC
Q 010590 400 REEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMG 472 (506)
Q Consensus 400 ~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~g 472 (506)
+ +..|.||||+|+... ....+.+++. ..++++|.+|.+|+||||+|++.+
T Consensus 170 ~-----------d~~g~t~L~~A~~~~-----------~~~~v~~Ll~-~~ga~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 170 Q-----------DKQGWTPLFHALAEG-----------HGDAAVLLVE-KYGAEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp C-----------CTTSCCHHHHHHHTT-----------CHHHHHHHHH-HHCCCSCCBCTTSCBGGGGCSSTT
T ss_pred c-----------CCCCCCHHHHHHHcC-----------CHHHHHHHHH-hcCCCCCccCCCCCcHHHHHHHHH
Confidence 7 556779999985322 2233444442 344889999999999999998654
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=8.2e-31 Score=253.97 Aligned_cols=180 Identities=18% Similarity=0.125 Sum_probs=156.1
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCC--------CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGL--------NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGK 321 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~ 321 (506)
...|..|.||||+|+..|+.++|++|+ +.|. |..|+||||+|+..|+.++|++|+++|+ +++.++ ..|+
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~-~~g~ 79 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLL-GFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA-GVLVAE-RGGH 79 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHH-HHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSSCCC-TTSC
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCC-CCCC
Confidence 346899999999999999999999999 3333 3359999999999999999999999999 999998 8999
Q ss_pred hHHHHHHHhCCHHHHHHHHHCCCC-----------------------------------------------CCCCCCCCC
Q 010590 322 TPLHIAAEMVSPDMVAVLLDHHAD-----------------------------------------------PNVRTVDGV 354 (506)
Q Consensus 322 tpLh~A~~~~~~~~v~~Ll~~ga~-----------------------------------------------~~~~d~~g~ 354 (506)
||||+|+..|+.+++++|+++|++ ++.+|..|+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp CHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred CHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 999999999999999999998865 788899999
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCC
Q 010590 355 TPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSS 434 (506)
Q Consensus 355 tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~ 434 (506)
||||+|+. .++.+++++|++.|++++.++. ..|.||||+|+..
T Consensus 160 t~L~~A~~------------------~g~~~~v~~Ll~~g~~~~~~~~----------~~g~tpL~~A~~~--------- 202 (282)
T 1oy3_D 160 TPLHVAVI------------------HKDAEMVRLLRDAGADLNKPEP----------TCGRTPLHLAVEA--------- 202 (282)
T ss_dssp CHHHHHHH------------------TTCHHHHHHHHHHTCCTTCCCT----------TTCCCHHHHHHHT---------
T ss_pred CHHHHHHH------------------cCCHHHHHHHHHcCCCCCCCCC----------CCCcCHHHHHHHc---------
Confidence 99999998 7899999999999999998732 3488999998532
Q ss_pred CCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 435 GSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+...++++++ ..++++|.+|..|+||||+|+..|.
T Consensus 203 --~~~~~v~~Ll--~~gad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 203 --QAASVLELLL--KAGADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp --TCHHHHHHHH--HTTCCTTCCCTTSCCHHHHHHTSSC
T ss_pred --CCHHHHHHHH--HcCCCCcccccCCCCHHHHHHHcCC
Confidence 2233445555 3458999999999999999999984
No 10
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=3.6e-30 Score=242.57 Aligned_cols=178 Identities=19% Similarity=0.106 Sum_probs=148.1
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCC-----CCCCCCCCChHH
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADV-----NYPAGPAGKTPL 324 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v-----~~~~~~~g~tpL 324 (506)
.|.||||+|+..|+.++++.|++..|+++ +|+||||+|+..|+.+++++|++.|+ ++ +.+| ..|+|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~-~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP-ELVFEPMTSEL-YEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCG-GGGGCCCCSTT-TTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCc-hhccccccccC-CCCcCHH
Confidence 58999999999999999999994446654 58999999999999999999999999 76 6666 7999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCC-------------CCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHH
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTV-------------DGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELV 391 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~-------------~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll 391 (506)
|+|+..|+.+++++|+++|++++.++. .|+||||+|+. .++.+++++|+
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll 141 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAAC------------------VGSEEIVRLLI 141 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHH------------------HTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHH------------------cCCHHHHHHHH
Confidence 999999999999999999999999876 79999999998 68899999999
Q ss_pred HhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcccc--ccccccCCCcceee------ccCCCCCCC
Q 010590 392 QSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATIN--NNSLNLDSSRLVYL------NLGAGTGNS 463 (506)
Q Consensus 392 ~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l------n~~D~~G~T 463 (506)
++|++++.+ +..|.||||+|+.... .++. +.++++. .+.+. |.+|..|+|
T Consensus 142 ~~ga~~~~~-----------d~~g~t~L~~A~~~~~---------~~~~~~i~~~Ll~--~g~~~~~~~~~~~~~~~g~t 199 (232)
T 2rfa_A 142 EHGADIRAQ-----------DSLGNTVLHILILQPN---------KTFACQMYNLLLS--YDGGDHLKSLELVPNNQGLT 199 (232)
T ss_dssp HTTCCTTCC-----------CTTSCCHHHHHHTCSC---------HHHHHHHHHHHHH--TTCSCSSCCGGGCCCTTSCC
T ss_pred HCCCCCCCC-----------CCCCCCHHHHHHHcCC---------hHHHHHHHHHHHh--cCCchhhhhhhccCCCCCCC
Confidence 999999988 5567799999854322 1111 1122221 11233 799999999
Q ss_pred cchhhhhcCCC
Q 010590 464 AHHHHHQMGSS 474 (506)
Q Consensus 464 ~LH~Aa~~gs~ 474 (506)
|||+|+..|+.
T Consensus 200 pl~~A~~~g~~ 210 (232)
T 2rfa_A 200 PFKLAGVEGNI 210 (232)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHcCCH
Confidence 99999999853
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=3.3e-30 Score=242.58 Aligned_cols=179 Identities=20% Similarity=0.239 Sum_probs=156.0
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...+..|.||||+|+..|+.+++++|+ +.|+++ .|+||||+|+..|+.+++++|+++|+ +++.++ ..|+|||
T Consensus 34 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L 110 (231)
T 3aji_A 34 TRTDQDSRTALHWACSAGHTEIVEFLL-QLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA-HVNAVN-QNGCTPL 110 (231)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHH
T ss_pred hcCCCCCCCHHHHHHHcCcHHHHHHHH-HhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCC-CCCCCC-CCCCCHH
Confidence 345788999999999999999999999 666654 58999999999999999999999999 999998 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 111 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~~~~~~---- 168 (231)
T 3aji_A 111 HYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAA------------------KGNLKMVHILLFYKASTNIQ---- 168 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------HTCHHHHHHHHHTTCCSCCC----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH------------------cCCHHHHHHHHhcCCCcccc----
Confidence 99999999999999999999999999999999999997 68899999999999999987
Q ss_pred CCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 405 LNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 405 ~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+..|.||||+|+... ....+++++ ..+.++|.+|..|+||||+|+..|.
T Consensus 169 -------~~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 169 -------DTEGNTPLHLACDEE-----------RVEEAKFLV--TQGASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp -------CTTSCCHHHHHHHTT-----------CHHHHHHHH--HTTCCSCCCCTTSCCHHHHSCHHHH
T ss_pred -------CCCCCCHHHHHHHCC-----------CHHHHHHHH--HCCCCCCCCCCCCCCHHHHHHhhHH
Confidence 456779999985322 233445555 3458899999999999999988763
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=1.1e-29 Score=237.69 Aligned_cols=180 Identities=17% Similarity=0.155 Sum_probs=157.6
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
..|..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|++.++.+++.++ ..|+||||
T Consensus 20 ~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~ 97 (223)
T 2f8y_A 20 QTDRTGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLI 97 (223)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC-TTCCCHHH
T ss_pred ccCCCCCchHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCcHHH
Confidence 34788999999999999999999999 666654 589999999999999999999999876899998 89999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCC
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGIL 405 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~ 405 (506)
+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~~~~~~----- 154 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA------------------VNNVDAAVVLLKNGANKDMQ----- 154 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC-----
T ss_pred HHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHH------------------cCCHHHHHHHHHcCCCCCCc-----
Confidence 9999999999999999999999999999999999998 78999999999999999987
Q ss_pred CCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 406 NEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 406 ~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
+..|.||||+|+... ...++++++ +.+.++|.+|..|+||||+|+..|..
T Consensus 155 ------~~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~ga~~~~~~~~g~t~l~~A~~~~~~ 204 (223)
T 2f8y_A 155 ------NNREETPLFLAAREG-----------SYETAKVLL--DHFANRDITDHMDRLPRDIAQERMHH 204 (223)
T ss_dssp ------CTTCCCHHHHHHHHT-----------CHHHHHHHH--HTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred ------CCCCcCHHHHHHHcC-----------CHHHHHHHH--HcCCCCccccccCCCHHHHHHHhcch
Confidence 456779999985322 223344444 34578999999999999999999853
No 13
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=1.1e-29 Score=240.34 Aligned_cols=196 Identities=21% Similarity=0.172 Sum_probs=120.5
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHh---cCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVM---GEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTP 323 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tp 323 (506)
.|..|.||||+||..|+.+++++|++ ..+.++ +|.||||+|+..|+.+++++|++.|+ +++.++ ..|+||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~ 82 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA-SPMALD-RHGQTA 82 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCC-CccccC-CCCCCH
Confidence 35556666666666666666666552 133322 35566666666666666666666666 666555 566666
Q ss_pred HHHHHHhCCHHHHHHHHHCCC----CCCCCCCCCCcHHHHHHH-----HHHHHHHcCCCCCCcc-----------cCCCh
Q 010590 324 LHIAAEMVSPDMVAVLLDHHA----DPNVRTVDGVTPLDILRT-----LTSDFLFKGAVPGLTH-----------IEPNK 383 (506)
Q Consensus 324 Lh~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tpLh~A~~-----~~~~~l~~~~~~~~~~-----------~~~~~ 383 (506)
||+|+..|+.+++++|+++|+ +++.+|..|+||||+|+. ....++..|++++... +..++
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence 666666666666666666554 555556666666666652 2333344444443322 11577
Q ss_pred HHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCC
Q 010590 384 LRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNS 463 (506)
Q Consensus 384 ~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T 463 (506)
.+++++|++.|++++.+ +..|.||||+|+... ....+++++ ..+.++|.+|..|+|
T Consensus 163 ~~~v~~Ll~~g~~~~~~-----------~~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~ga~~~~~~~~g~t 218 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQ-----------MYSGSSALHSASGRG-----------LLPLVRTLV--RSGADSSLKNCHNDT 218 (241)
T ss_dssp HHHHHHHHHTTCCTTCB-----------CTTSCBHHHHHHHHT-----------CHHHHHHHH--HTTCCTTCCCTTSCC
T ss_pred HHHHHHHHHcCCCCCCc-----------CCCCCCHHHHHHHcC-----------CHHHHHHHH--hcCCCCCCcCCCCCC
Confidence 88999999999998877 456779999984322 223344444 345789999999999
Q ss_pred cchhhhhcCC
Q 010590 464 AHHHHHQMGS 473 (506)
Q Consensus 464 ~LH~Aa~~gs 473 (506)
|||+|+..|.
T Consensus 219 pl~~A~~~~~ 228 (241)
T 1k1a_A 219 PLMVARSRRV 228 (241)
T ss_dssp TTTTCSSHHH
T ss_pred HHHHHHhcCc
Confidence 9999998874
No 14
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=247.69 Aligned_cols=173 Identities=17% Similarity=0.115 Sum_probs=103.5
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.|..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|++.|+ +++..+ .|+||||+
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~--~g~t~L~~ 163 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA-SVQPES--DLASPIHE 163 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CSSCSC--TTSCHHHH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCC-CCCCCC--CCCCHHHH
Confidence 3444555555555555555555555 333322 24455555555555555555555555 444332 35555555
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCC
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILN 406 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~ 406 (506)
|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~------- 218 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACE------------------NQQRACVKKLLESGADVNQ------- 218 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHH------------------TTCHHHHHHHHHTTCCTTC-------
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH------------------cCcHHHHHHHHHCCCCCCC-------
Confidence 555555555555555555555555555555555554 6788899999999988872
Q ss_pred CCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhc
Q 010590 407 EPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQM 471 (506)
Q Consensus 407 ~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~ 471 (506)
+..|.||||+|+... ...++++++ ..++++|.+|.+|+||||+|+..
T Consensus 219 -----~~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 219 -----GKGQDSPLHAVVRTA-----------SEELACLLM--DFGADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp -----CBTTBCHHHHHHHTT-----------CHHHHHHHH--HTTCCTTCCCTTSCCGGGGSCTT
T ss_pred -----CCCCCCHHHHHHHcC-----------CHHHHHHHH--HCCCCCCCcCCCCCCHHHHhcCc
Confidence 456789999984322 233444555 34588999999999999999944
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=2.5e-30 Score=247.45 Aligned_cols=178 Identities=20% Similarity=0.198 Sum_probs=129.8
Q ss_pred cCCccccHHHHHHHhcC-------------CHHHHHHHHhcCCC------CCCChHHHHHHHHcCCHHHHHHHHHcCCCC
Q 010590 251 DLEDQKIRRMRRALDSS-------------DVELVKLMVMGEGL------NLDEALALHYAVENCSREVVKALLELGAAD 311 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g-------------~~~~v~~Ll~~~~~------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~ 311 (506)
..|..|.||||+|+..| +.+++++|+ +.|+ |.+|+||||+|+..|+.++|++|+++|+ +
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~ 82 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFI-YQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA-D 82 (253)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-C
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHH-HccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-C
Confidence 45889999999999987 899999999 5554 3468999999999999999999999999 9
Q ss_pred CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHH
Q 010590 312 VNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHA-DPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLEL 390 (506)
Q Consensus 312 v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L 390 (506)
++.++ ..|+||||+|+..|+.+++++|+++|+ +++.+|..|+||||+|+. .++.+++++|
T Consensus 83 ~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~L 143 (253)
T 1yyh_A 83 ANIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR------------------LAVEGMLEDL 143 (253)
T ss_dssp TTCCC-TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH------------------HTCSSHHHHH
T ss_pred CCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH------------------cChHHHHHHH
Confidence 99998 899999999999999999999999987 999999999999999997 5788899999
Q ss_pred HHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhh
Q 010590 391 VQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQ 470 (506)
Q Consensus 391 l~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~ 470 (506)
++.|++++.+ +..|.||||+|+... ....+++++ ..+.++|.+|..|+||||+|+.
T Consensus 144 l~~g~~~~~~-----------d~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 144 INSHADVNAV-----------DDLGKSALHWAAAVN-----------NVDAAVVLL--KNGANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp HHTTCCTTCB-----------CTTSCBHHHHHHHHT-----------CHHHHHHHH--HTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHcCCCCCCc-----------CCCCCCHHHHHHHcC-----------CHHHHHHHH--HcCCCCCCcCCCCCCHHHHHHH
Confidence 9999999988 456779999985322 233344444 3458899999999999999999
Q ss_pred cCC
Q 010590 471 MGS 473 (506)
Q Consensus 471 ~gs 473 (506)
.|+
T Consensus 200 ~~~ 202 (253)
T 1yyh_A 200 EGS 202 (253)
T ss_dssp HTC
T ss_pred CCC
Confidence 984
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=5.2e-30 Score=258.54 Aligned_cols=180 Identities=13% Similarity=0.021 Sum_probs=154.1
Q ss_pred cccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC---CChHHHHHHHHcCCHHHHHHHHHc----CCCCCCC-------
Q 010590 249 AADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL---DEALALHYAVENCSREVVKALLEL----GAADVNY------- 314 (506)
Q Consensus 249 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~---~g~t~Lh~A~~~g~~~~v~~Ll~~----g~~~v~~------- 314 (506)
....|..|.||||+|+..|+.++|++|+ +.|+++ +|.||||+|+..|+.++|++|++. |+ +++.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~~~~~~ 123 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLA-SVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQ-MPESLLNECDE 123 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHH-HHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTC-CHHHHHTCCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCC-CHHHHHhhcch
Confidence 3456788999999999999999999999 555544 689999999999999999999998 87 7776
Q ss_pred ----------CCCCCCChHHHHHHHhC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCC
Q 010590 315 ----------PAGPAGKTPLHIAAEMV--SPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPN 382 (506)
Q Consensus 315 ----------~~~~~g~tpLh~A~~~~--~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~ 382 (506)
.+ ..|+||||+|+..| +.+++++|+++|++++.+|..|+||||+|+. .+
T Consensus 124 ~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~------------------~g 184 (364)
T 3ljn_A 124 REVNEIGSHVKH-CKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAME------------------FR 184 (364)
T ss_dssp CCEEEETTEEEE-ESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH------------------TT
T ss_pred HhhhhhccccCC-CCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHH------------------cC
Confidence 77 78999999999999 9999999999999999999999999999998 78
Q ss_pred hHHHHHHHHHhccC-----ccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccC
Q 010590 383 KLRLCLELVQSAAL-----VLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLG 457 (506)
Q Consensus 383 ~~~~~~~Ll~~ga~-----~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~ 457 (506)
+.+++++|++.|++ ++.+ +..|.||||+|+.. +...++++++ ..++++|.+
T Consensus 185 ~~~~v~~Ll~~g~~~~~~~~~~~-----------~~~g~t~L~~A~~~-----------g~~~~v~~Ll--~~gad~~~~ 240 (364)
T 3ljn_A 185 NREALDLMMDTVPSKSSLRLDYA-----------NKQGNSHLHWAILI-----------NWEDVAMRFV--EMGIDVNME 240 (364)
T ss_dssp CHHHHHHHHHHCSCSSSCCTTCC-----------CTTCCCTTHHHHTT-----------TCHHHHHHHH--TTTCCTTCC
T ss_pred CHHHHHHHHhccccccccccccc-----------CCCCCcHHHHHHHc-----------CCHHHHHHHH--HcCCCCCCC
Confidence 99999999999998 6655 66788999998532 2334455555 355899999
Q ss_pred CCCCCCcchhhhhcCC
Q 010590 458 AGTGNSAHHHHHQMGS 473 (506)
Q Consensus 458 D~~G~T~LH~Aa~~gs 473 (506)
|..|+||||+|+..|.
T Consensus 241 d~~g~tpL~~A~~~g~ 256 (364)
T 3ljn_A 241 DNEHTVPLYLSVRAAM 256 (364)
T ss_dssp CTTSCCHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHhCh
Confidence 9999999999999984
No 17
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=2.7e-29 Score=243.13 Aligned_cols=196 Identities=20% Similarity=0.135 Sum_probs=156.3
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHH
Q 010590 253 EDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIA 327 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A 327 (506)
+..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.++ ..|+||||+|
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A 112 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLL-RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGA-DVNECD-FYGFTAFMEA 112 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCBC-TTCCBHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccC-cccCCHHHHH
Confidence 667899999999999999999999 666654 58899999999999999999999999 999998 8999999999
Q ss_pred HHhCCHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHH-----HHHHHHHc-CCCCCCcccC----------C
Q 010590 328 AEMVSPDMVAVLLDHHADPNVR----------TVDGVTPLDILRT-----LTSDFLFK-GAVPGLTHIE----------P 381 (506)
Q Consensus 328 ~~~~~~~~v~~Ll~~ga~~~~~----------d~~g~tpLh~A~~-----~~~~~l~~-~~~~~~~~~~----------~ 381 (506)
+..|+.+++++|+++|++++.+ +..|.||||+|+. ....++.. |++++..... .
T Consensus 113 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 113 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred HHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 9999999999999999999887 7889999999994 33444544 6666544322 2
Q ss_pred Ch----HHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccC
Q 010590 382 NK----LRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLG 457 (506)
Q Consensus 382 ~~----~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~ 457 (506)
+. .+++++|++.|++++.+ +..|.||||+|+.. +....+++++. ..++++|.+
T Consensus 193 ~~~~~~~~i~~~Ll~~g~~~~~~-----------~~~g~t~L~~A~~~-----------~~~~~v~~Ll~-~~g~~~~~~ 249 (285)
T 1wdy_A 193 SDDSDVEAITHLLLDHGADVNVR-----------GERGKTPLILAVEK-----------KHLGLVQRLLE-QEHIEINDT 249 (285)
T ss_dssp SCTTTHHHHHHHHHHTTCCSSCC-----------CTTSCCHHHHHHHT-----------TCHHHHHHHHH-SSSCCTTCC
T ss_pred cccchHHHHHHHHHHcCCCCCCc-----------CCCCCcHHHHHHHc-----------CCHHHHHHHHh-ccCCCcccc
Confidence 23 67788888888888876 45677999998532 22333444443 245789999
Q ss_pred CCCCCCcchhhhhcCCC
Q 010590 458 AGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 458 D~~G~T~LH~Aa~~gs~ 474 (506)
|..|+||||+|+..|+.
T Consensus 250 ~~~g~t~l~~A~~~~~~ 266 (285)
T 1wdy_A 250 DSDGKTALLLAVELKLK 266 (285)
T ss_dssp CTTSCCHHHHHHHTTCH
T ss_pred CCCCCcHHHHHHHcCcH
Confidence 99999999999998843
No 18
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-30 Score=252.26 Aligned_cols=195 Identities=22% Similarity=0.186 Sum_probs=158.8
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...+..|.||||+||..|+.++|++|+ +.|+++ +|.||||+|+..|+.++|++|+++|+ +++.+| ..|+|||
T Consensus 34 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~-~~g~tpL 110 (299)
T 1s70_B 34 TKVKFDDGAVFLAACSSGDTEEVLRLL-ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA-NINQPD-NEGWIPL 110 (299)
T ss_dssp CCCEECHHHHHHHHHHHTCHHHHHHHH-HHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHH
T ss_pred cccccCCccHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCC-CCCCcHH
Confidence 344668899999999999999999999 556544 58999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-----HHHHH------------------------------
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLT-----SDFLF------------------------------ 369 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~-----~~~l~------------------------------ 369 (506)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+... ..++.
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 9999999999999999999999999999999999997322 11111
Q ss_pred -------cCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcccccc
Q 010590 370 -------KGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNN 442 (506)
Q Consensus 370 -------~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~ 442 (506)
.|..|...++..++.+++++|++.|++++.+ +..|.||||+|+... ....+
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~-----------d~~g~tpL~~A~~~~-----------~~~~v 248 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK-----------DYDGWTPLHAAAHWG-----------KEEAC 248 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC-----------CTTCCCHHHHHHHTT-----------CHHHH
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCc-----------CCCCCcHHHHHHhcC-----------CHHHH
Confidence 1223333344467789999999999999987 556779999985322 23344
Q ss_pred ccccCCCcceeeccCCCCCCCcchhhhhc
Q 010590 443 SLNLDSSRLVYLNLGAGTGNSAHHHHHQM 471 (506)
Q Consensus 443 ~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~ 471 (506)
++++ ..++++|.+|..|+||||+|+..
T Consensus 249 ~~Ll--~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 249 RILV--ENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHHH--HTTCCTTCCCTTSCCTTTSCCSG
T ss_pred HHHH--HcCCCCCCcCCCCCCHHHHHHHH
Confidence 4555 34588999999999999999764
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=2.3e-29 Score=237.78 Aligned_cols=179 Identities=23% Similarity=0.215 Sum_probs=157.6
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...|..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|++.|+ +++.++ ..|.|||
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L 81 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLV-QAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA-LVDPKD-AEGSTCL 81 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-CCCCCC-TTSCCHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHH-HcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCC-CCCCCC-CCCCcHH
Confidence 356889999999999999999999999 666654 58999999999999999999999999 999998 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccC
Q 010590 325 HIAAEMVSPDMVAVLLDHH-ADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEG 403 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~ 403 (506)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~------------------~~~~~~~~~Ll~~g~~~~~~--- 140 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE------------------YKHVDLVKLLLSKGSDINIR--- 140 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC---
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH------------------cCCHHHHHHHHHCCCCCCcc---
Confidence 9999999999999999998 8999999999999999998 78999999999999999887
Q ss_pred CCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 404 ILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 404 ~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+..|.||||.|+... ....+++.+ ..+.++|.+|..|+||||+|+..|.
T Consensus 141 --------~~~g~t~L~~A~~~~-----------~~~~~~~Ll--~~g~~~~~~~~~g~t~L~~A~~~~~ 189 (237)
T 3b7b_A 141 --------DNEENICLHWAAFSG-----------CVDIAEILL--AAKCDLHAVNIHGDSPLHIAARENR 189 (237)
T ss_dssp --------CTTSCCHHHHHHHHC-----------CHHHHHHHH--TTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred --------CCCCCCHHHHHHHCC-----------CHHHHHHHH--HcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 456779999984322 223344444 3458899999999999999999984
No 20
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=4.2e-29 Score=249.44 Aligned_cols=233 Identities=19% Similarity=0.172 Sum_probs=163.6
Q ss_pred HHHHHHhhcccchhHHHhhccccccccccc-ccccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChH
Q 010590 214 VVAKIEDLRHKSSLARRSLISHHHHHHHHD-LSAAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEAL 287 (506)
Q Consensus 214 ~~~~l~~~~~~~~l~~a~~~~~~~~~~~l~-~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t 287 (506)
......+..+.++|................ .........|..|.||||+|+..|+.+++++|+ +.|+++ +|+|
T Consensus 15 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t 93 (351)
T 3utm_A 15 AKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLL-QHGADVHAKDKGGLV 93 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCC
T ss_pred eeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCc
Confidence 334444555677777766555444322111 123334456788999999999999999999999 666655 4889
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH---
Q 010590 288 ALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLT--- 364 (506)
Q Consensus 288 ~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~--- 364 (506)
|||+|+..|+.+++++|+++|+ +++.++ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~ 171 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGA-CVNAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRE 171 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCC-CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHH
Confidence 9999999999999999999999 999998 89999999999999999999999999999988888888887764110
Q ss_pred -----------------------HHHHHcCC----------CCCCcccCC---ChHHHHHHHHHhccCccccccCCCCCC
Q 010590 365 -----------------------SDFLFKGA----------VPGLTHIEP---NKLRLCLELVQSAALVLSREEGILNEP 408 (506)
Q Consensus 365 -----------------------~~~l~~~~----------~~~~~~~~~---~~~~~~~~Ll~~ga~~~~~~~~~~~~~ 408 (506)
..++..+. .|...+... +..+++++|++.|++++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~-------- 243 (351)
T 3utm_A 172 RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK-------- 243 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC--------
T ss_pred HHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc--------
Confidence 01111110 111111112 5678899999999999887
Q ss_pred CCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 409 SSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 409 ~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+..|.||||+|+... ...++++++ ..++++|.+|..|+||||+|+..|+
T Consensus 244 ---~~~g~t~L~~A~~~g-----------~~~~v~~Ll--~~ga~~n~~d~~g~t~L~~A~~~~~ 292 (351)
T 3utm_A 244 ---NKDFMTPLHVAAERA-----------HNDVMEVLH--KHGAKMNALDSLGQTALHRAALAGH 292 (351)
T ss_dssp ---CTTCCCHHHHHHHTT-----------CHHHHHHHH--HTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ---CCCCCCHHHHHHHcC-----------CHHHHHHHH--HCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 445668888874322 223344444 3447788888888888888888874
No 21
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=3.6e-29 Score=230.22 Aligned_cols=183 Identities=17% Similarity=0.142 Sum_probs=154.5
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHhcCCCC-----CCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHH
Q 010590 253 EDQKIRRMRRALDSSDVELVKLMVMGEGLN-----LDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIA 327 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d-----~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A 327 (506)
+..+.||||.|+..|+.+.++.|+...+.+ .+|+||||+|+..|+.++|++|+++|+ +++.++ ..|+||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA-DINLQN-SISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCC-CCCCCHHHHH
Confidence 456899999999999999999999544433 358999999999999999999999999 999998 8999999999
Q ss_pred HHhCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhc-cCccccccCCC
Q 010590 328 AEMVSPDMVAVLL-DHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSA-ALVLSREEGIL 405 (506)
Q Consensus 328 ~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~g-a~~~~~~~~~~ 405 (506)
+..|+.+++++|+ ..+++++.+|..|+||||+|+. .++.+++++|++.| ++++.+
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~~~~~~~----- 136 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAE------------------KGHIDNVKLLLEDGREDIDFQ----- 136 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHH------------------TTCHHHHHHHHHHCCCCTTCC-----
T ss_pred HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHH------------------cCCHHHHHHHHHcCCCCcCCC-----
Confidence 9999999999999 5688999999999999999998 78999999999999 888887
Q ss_pred CCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 406 NEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 406 ~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
+..|.||||.|+..... ......++++++ +.++++|.+|..|+||||+|++.|..
T Consensus 137 ------~~~g~t~L~~A~~~~~~------~~~~~~~v~~Ll--~~ga~~~~~~~~g~t~l~~A~~~~~~ 191 (201)
T 3hra_A 137 ------NDFGYTALIEAVGLREG------NQLYQDIVKLLM--ENGADQSIKDNSGRTAMDYANQKGYT 191 (201)
T ss_dssp ------CTTSCCHHHHHHHSSCC------SHHHHHHHHHHH--HTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred ------CCCCCCHHHHHHHhccc------hhhHHHHHHHHH--HCCCCCCccCCCCCCHHHHHHHcCCH
Confidence 55677999998532210 000133445555 34588999999999999999999853
No 22
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=237.30 Aligned_cols=178 Identities=21% Similarity=0.202 Sum_probs=151.8
Q ss_pred cccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 249 AADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 249 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
....|..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.+| ..|+|||
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L 138 (261)
T 2xai_A 62 VNGVTADWHTPLFNACVSGSWDCVNLLL-QHGASVQPESDLASPIHEAARRGHVECVNSLIAYGG-NIDHKI-SHLGTPL 138 (261)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCB-TTTBCHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCcCC-CCCCCHH
Confidence 4456789999999999999999999999 677655 48999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++. |..|+||||+|+. .++.+++++|++.|+|++.+
T Consensus 139 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~------------------~~~~~~v~~Ll~~gad~~~~---- 195 (261)
T 2xai_A 139 YLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVAR------------------TASEELACLLMDFGADTQAK---- 195 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHH------------------HTCHHHHHHHHHTTCCTTCC----
T ss_pred HHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHH------------------cCCHHHHHHHHHcCCCCCCc----
Confidence 999999999999999999999996 8999999999998 68899999999999999988
Q ss_pred CCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCC------CcceeeccCCCCCCCcchhhhhcC
Q 010590 405 LNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDS------SRLVYLNLGAGTGNSAHHHHHQMG 472 (506)
Q Consensus 405 ~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ln~~D~~G~T~LH~Aa~~g 472 (506)
+..|.||||+|+... . ...+.+.. .....++.+|..|+||||+|++..
T Consensus 196 -------d~~g~tpl~~A~~~~-----------~--~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~ 249 (261)
T 2xai_A 196 -------NAEGKRPVELVPPES-----------P--LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLV 249 (261)
T ss_dssp -------CTTSCCGGGGSCTTC-----------T--HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSS
T ss_pred -------CCCCCChhhhccccc-----------c--HHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccC
Confidence 556779999984211 1 11111110 112467889999999999999865
No 23
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=1.3e-28 Score=245.68 Aligned_cols=196 Identities=20% Similarity=0.150 Sum_probs=143.0
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHhcCCCCCC------ChHHHHHHHHcCCHHHHHHHHHcCCCCCCC------------
Q 010590 253 EDQKIRRMRRALDSSDVELVKLMVMGEGLNLD------EALALHYAVENCSREVVKALLELGAADVNY------------ 314 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~~------g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~------------ 314 (506)
+.+|.||||.|+..|++++|++|| +.|+|++ |+||||+||..|+.++|++||++|+ +++.
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL-~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga-~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHH-HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCC-chhhhccCCCchhHHH
Confidence 456889999999999999999999 6676652 7899999999999999999999988 6654
Q ss_pred ---------------------CCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHH-
Q 010590 315 ---------------------PAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVR----------TVDGVTPLDILRT- 362 (506)
Q Consensus 315 ---------------------~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~----------d~~g~tpLh~A~~- 362 (506)
+| ..|+||||+|+..|+.+++++|+++|++++.+ +..|.||||+|+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d-~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred HhcccchhhHHhhhccchhhhhc-cCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 44 56788888888888888888888888877654 3457888888874
Q ss_pred ----HHHHHHH-cCCCCCCcccC--------------CChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 363 ----LTSDFLF-KGAVPGLTHIE--------------PNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 363 ----~~~~~l~-~~~~~~~~~~~--------------~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
.++.+|. .|++++..... .....++++|+++|++++.+ +..|.||||+|+
T Consensus 179 g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~-----------d~~g~t~L~~a~ 247 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR-----------GERGKTPLILAV 247 (337)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCC-----------CGGGCCHHHHHH
T ss_pred CCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCc-----------CCCCCCHHHHHH
Confidence 3334443 36666544322 11234567777777777766 567789999985
Q ss_pred cCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 424 CSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
... ....+..++. ...+++|.+|.+|+||||+|++.|+.
T Consensus 248 ~~~-----------~~~~v~~Ll~-~~~~~vn~~d~~G~TpL~~A~~~g~~ 286 (337)
T 4g8k_A 248 EKK-----------HLGLVQRLLE-QEHIEINDTDSDGKTALLLAVELKLK 286 (337)
T ss_dssp HTT-----------CHHHHHHHHT-STTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred Hhh-----------hhHHHHHHHH-hcCCcccCcCCCCCCHHHHHHHcCCH
Confidence 322 1222333332 34578999999999999999999853
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=243.62 Aligned_cols=197 Identities=18% Similarity=0.198 Sum_probs=142.5
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCC-------------CCCChHHHHHHHHcCCHH-HHHHHHHcCCCCCCCC
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGL-------------NLDEALALHYAVENCSRE-VVKALLELGAADVNYP 315 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-------------d~~g~t~Lh~A~~~g~~~-~v~~Ll~~g~~~v~~~ 315 (506)
...|.++.+||+.||..|+.++|++|| +.+. +..|.||||+|+..+..+ ++++|++.|+ ++|.+
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL-~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Ga-dvn~~ 82 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLL-EWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGL-GVNVT 82 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHH-TCC----------------------------------------CCC-CTTCC
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHH-HCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCC-CCCCc
Confidence 345788999999999999999999999 5443 234789999999887764 8899999999 99999
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-----HHHHHHHcCCCCCCcccC----------
Q 010590 316 AGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT-----LTSDFLFKGAVPGLTHIE---------- 380 (506)
Q Consensus 316 ~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~-----~~~~~l~~~~~~~~~~~~---------- 380 (506)
| ..|+||||+|+..|+.++|++|++.|++++.++..|.||+|+|+. ....++..|++++.....
T Consensus 83 d-~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 83 S-QDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp C-TTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred C-CCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 9 899999999999999999999999999999999999999999994 445566677777655332
Q ss_pred CChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCC
Q 010590 381 PNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGT 460 (506)
Q Consensus 381 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~ 460 (506)
.++.+++++|++.|++++.+ +..|.||||+|+.. +...++++++ ..++++|.+|.+
T Consensus 162 ~g~~~~v~~Ll~~gadvn~~-----------~~~g~t~Lh~A~~~-----------g~~~~v~~Ll--~~Gad~~~~d~~ 217 (269)
T 4b93_B 162 GGHHELVALLLQHGASINAS-----------NNKGNTALHEAVIE-----------KHVFVVELLL--LHGASVQVLNKR 217 (269)
T ss_dssp TTCGGGHHHHHHTTCCTTCB-----------CTTSCBHHHHHHHT-----------TCHHHHHHHH--HTTCCSCCCCTT
T ss_pred CCCHHHHHHHHHCCCCCCcc-----------ccCCCcHHHHHHHc-----------CCHHHHHHHH--HCCCCCCCcCCC
Confidence 56677888889988888877 55678999999532 2344556666 346899999999
Q ss_pred CCCcchhhhhcCC
Q 010590 461 GNSAHHHHHQMGS 473 (506)
Q Consensus 461 G~T~LH~Aa~~gs 473 (506)
|+||||+|+++|.
T Consensus 218 G~TpL~~A~~~~~ 230 (269)
T 4b93_B 218 QRTAVDCAEQNSK 230 (269)
T ss_dssp SCCSGGGSCTTCH
T ss_pred CCCHHHHHHhCCc
Confidence 9999999999884
No 25
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=4.7e-30 Score=242.62 Aligned_cols=210 Identities=15% Similarity=0.064 Sum_probs=136.9
Q ss_pred hhcccchhHHHhhccccccccccccccc----ccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHH
Q 010590 220 DLRHKSSLARRSLISHHHHHHHHDLSAA----AAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALH 290 (506)
Q Consensus 220 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh 290 (506)
+..+.|||.................... .....+..|.||||+|+..|+.+++++|+ +.|+++ +|+||||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALL-GAGCDPELRDFRGNTPLH 83 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCC-SCCCCSCCCCTTCCCHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHH
Confidence 3456777776665444333221111111 23455667788888888888888888888 666644 4778888
Q ss_pred HHHHcCCHHHHHHHHHcCCCC------CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHH
Q 010590 291 YAVENCSREVVKALLELGAAD------VNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTV-DGVTPLDILRTL 363 (506)
Q Consensus 291 ~A~~~g~~~~v~~Ll~~g~~~------v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpLh~A~~~ 363 (506)
+|+..|+.+++++|++.|+ + ++..+ ..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||+|+.
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~- 160 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCT-TPHLHSILKATN-YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD- 160 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTT-TTSSSCGGGCCC-TTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH-
T ss_pred HHHHcCCHHHHHHHHhccc-chhHHHHhhccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH-
Confidence 8888888888888888776 4 45555 6788888888888888888888888888888876 78888888876
Q ss_pred HHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccc
Q 010590 364 TSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNS 443 (506)
Q Consensus 364 ~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~ 443 (506)
.++.+++++|+++|++++.+ +..|.||||+|+. .+...+++
T Consensus 161 -----------------~~~~~~v~~Ll~~ga~~~~~-----------~~~g~tpl~~A~~-----------~~~~~~~~ 201 (236)
T 1ikn_D 161 -----------------LQNPDLVSLLLKCGADVNRV-----------TYQGYSPYQLTWG-----------RPSTRIQQ 201 (236)
T ss_dssp -----------------TTCHHHHHHHHTTTCCSCCC-----------CTTCCCGGGGCTT-----------SSCHHHHH
T ss_pred -----------------cCCHHHHHHHHHcCCCCCcc-----------cCCCCCHHHHHHc-----------cCchHHHH
Confidence 67778888888888887776 4456688888732 12233344
Q ss_pred cccCCCcceeeccCCCCCCCcchhhhhcC
Q 010590 444 LNLDSSRLVYLNLGAGTGNSAHHHHHQMG 472 (506)
Q Consensus 444 ~~~~~~~~~~ln~~D~~G~T~LH~Aa~~g 472 (506)
+++........+.++..|.||.+.++...
T Consensus 202 ~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 202 QLGQLTLENLQMLPESEDEESYDTESEFT 230 (236)
T ss_dssp HHHTTSCGGGSSCCCCCTTTCCCCC----
T ss_pred HHHHcchhhhhcCCccchHHHHhhhcccc
Confidence 44421222233477778888877776655
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=4.7e-29 Score=234.01 Aligned_cols=174 Identities=20% Similarity=0.194 Sum_probs=149.1
Q ss_pred ccHHHHHHHhcCCHHHHHHHHhcCC------CCCCChHHHHHHHHcCCHHHHHHHHHcC--CCCCCC-CCCCCCChHHHH
Q 010590 256 KIRRMRRALDSSDVELVKLMVMGEG------LNLDEALALHYAVENCSREVVKALLELG--AADVNY-PAGPAGKTPLHI 326 (506)
Q Consensus 256 g~t~L~~A~~~g~~~~v~~Ll~~~~------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g--~~~v~~-~~~~~g~tpLh~ 326 (506)
|.||||+|+..|+.++++.|++ .+ .|.+|+||||+|+..|+.+++++|++.| . +++. .+ ..|+||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~-~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLH-SKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV-NLDDYPD-DSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHH-HCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTC-CGGGCCC-TTSCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHh-cCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccc-cccccCC-CCCCCHHHH
Confidence 6899999999999999999993 33 3557999999999999999999999999 5 5555 66 899999999
Q ss_pred HHHhCCHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 327 AAEMVSPDMVAVLLDHH--ADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~g--a~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+..|+.+++++|+++| ++++.+|..|+||||+|+. .++.+++++|+++|++++.+
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~------------------~~~~~~~~~Ll~~g~~~~~~---- 136 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG------------------KKWFEVSQFLIENGASVRIK---- 136 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHH------------------TTCHHHHHHHHHTTCCSCCC----
T ss_pred HHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHH------------------cCCHhHHHHHHHcCCCcccc----
Confidence 99999999999999998 9999999999999999998 78999999999999999987
Q ss_pred CCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 405 LNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 405 ~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+..|.||||+|+... ....+++.++ ....++|.+|..|+||||+|+..|+
T Consensus 137 -------~~~g~t~L~~A~~~~-----------~~~~v~~Ll~-~g~~~~~~~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 137 -------DKFNQIPLHRAASVG-----------SLKLIELLCG-LGKSAVNWQDKQGWTPLFHALAEGH 186 (228)
T ss_dssp -------CTTSCCHHHHHHHTT-----------CHHHHHHHHT-TTCCCSCCCCTTSCCHHHHHHHTTC
T ss_pred -------CCCCCCHHHHHHHcC-----------CHHHHHHHHh-cCcccccCcCCCCCCHHHHHHHcCC
Confidence 456779999985322 2334455553 2227899999999999999999884
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=5.9e-29 Score=242.39 Aligned_cols=177 Identities=20% Similarity=0.150 Sum_probs=153.5
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...|..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.++|++|+++|+ +++.+| ..|+|||
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~-~~g~t~L 129 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA-QVNGVT-ADWHTPL 129 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHH-HTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTC-CSSCCC-TTCCCHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCC-CCCCCC-CCCCCHH
Confidence 457889999999999999999999999 667655 58999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++..+ .|+||||+|+. .++.+++++|++.|++++.+
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~------------------~g~~~~v~~Ll~~g~~~~~~---- 186 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAAR------------------RGHVECVNSLIAYGGNIDHK---- 186 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHH------------------HTCHHHHHHHHHTTCCTTCC----
T ss_pred HHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHH------------------cCCHHHHHHHHHCCCCCCCc----
Confidence 99999999999999999999998754 59999999998 68899999999999999887
Q ss_pred CCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 405 LNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 405 ~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+..|.||||+|+... ....+++++ ..+.++|. |..|+||||+|+..|+
T Consensus 187 -------d~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~ga~~~~-~~~g~t~L~~A~~~~~ 234 (285)
T 3d9h_A 187 -------ISHLGTPLYLACENQ-----------QRACVKKLL--ESGADVNQ-GKGQDSPLHAVVRTAS 234 (285)
T ss_dssp -------BTTTBCHHHHHHHTT-----------CHHHHHHHH--HTTCCTTC-CBTTBCHHHHHHHTTC
T ss_pred -------CCCCCCHHHHHHHcC-----------cHHHHHHHH--HCCCCCCC-CCCCCCHHHHHHHcCC
Confidence 556779999985322 223344444 23467884 9999999999999985
No 28
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=7.1e-30 Score=248.91 Aligned_cols=178 Identities=15% Similarity=0.064 Sum_probs=156.2
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC---CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL---DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~---~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
...|..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.++|++|+++|+ +++.+| ..|+||||+
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~d-~~g~t~L~~ 101 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLL-NAGALKNLLENEFPLHQAATLEDTKIVKILLFSGL-DDSQFD-DKGNTALYY 101 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTC-CTTCCC-TTSCCHHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcC-CCCCcHHHH
Confidence 456889999999999999999999999 667765 58999999999999999999999999 999998 899999999
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCC
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDG-VTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGIL 405 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g-~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~ 405 (506)
|+..|+.+++++|+++|++++.+|..| .||||+|+. .++.+++++|++.|+++...
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~------------------~~~~~~v~~Ll~~g~~~~~~----- 158 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM------------------LNDVSIVSYFLSEIPSTFDL----- 158 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHH------------------TTCHHHHHHHHTTSCTTCCC-----
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH------------------cCCHHHHHHHHhCCCccccc-----
Confidence 999999999999999999999999999 799999998 78999999999999876321
Q ss_pred CCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCc-chhhhhcCC
Q 010590 406 NEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSA-HHHHHQMGS 473 (506)
Q Consensus 406 ~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~-LH~Aa~~gs 473 (506)
..|.||||+|+.. +...++++++ +.++++|.+|..|+|| ||+|+..|+
T Consensus 159 -------~~g~t~L~~A~~~-----------g~~~~v~~Ll--~~gad~n~~~~~g~t~~L~~A~~~~~ 207 (285)
T 3kea_A 159 -------AILLSCIHITIKN-----------GHVDMMILLL--DYMTSTNTNNSLLFIPDIKLAIDNKD 207 (285)
T ss_dssp -------STHHHHHHHHHHT-----------TCHHHHHHHH--HHHHHTCTTCCCBCCTTHHHHHHHTC
T ss_pred -------cCCccHHHHHHHc-----------ChHHHHHHHH--HcCCCCCcccCCCCChHHHHHHHcCC
Confidence 2788999998532 2233445555 3468899999999998 999999984
No 29
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=2.9e-28 Score=251.83 Aligned_cols=207 Identities=21% Similarity=0.236 Sum_probs=139.8
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
..+..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.++ ..|+||||
T Consensus 141 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~ 217 (437)
T 1n11_A 141 CMTKKGFTPLHVAAKYGKVRVAELLL-ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG-SPHSPA-WNGYTPLH 217 (437)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTC-CSCCCC-TTCCCHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCCCcC-CCCCCHHH
Confidence 34566778888888888888888877 455533 46778888888888888888888877 777776 67778888
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-----HHHHHHHcCCCCCCcccC----------CChHHHHHHH
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT-----LTSDFLFKGAVPGLTHIE----------PNKLRLCLEL 390 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~-----~~~~~l~~~~~~~~~~~~----------~~~~~~~~~L 390 (506)
+|+..|+.+++++|+++|++++.+|..|.||||+|+. ....++.++++++..... .++.+++++|
T Consensus 218 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 297 (437)
T 1n11_A 218 IAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 297 (437)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 8888888888888888887777777778888887773 344445556655444322 4677889999
Q ss_pred HHhccCccccccCCCC----------------------CCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCC
Q 010590 391 VQSAALVLSREEGILN----------------------EPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDS 448 (506)
Q Consensus 391 l~~ga~~~~~~~~~~~----------------------~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (506)
+++|++++.++..|.+ .++..+..|.||||+|+.. +...++++++
T Consensus 298 l~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~-----------g~~~iv~~Ll-- 364 (437)
T 1n11_A 298 IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ-----------GHTDIVTLLL-- 364 (437)
T ss_dssp HHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-----------TCHHHHHHHH--
T ss_pred HhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC-----------ChHHHHHHHH--
Confidence 9999999988776664 2234455566666665321 1222333433
Q ss_pred CcceeeccCCCCCCCcchhhhhcCC
Q 010590 449 SRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 449 ~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
..++++|.+|.+|+||||+|++.|.
T Consensus 365 ~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 365 KNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp HTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred HCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 2335666666666666666666664
No 30
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=2.8e-29 Score=240.35 Aligned_cols=177 Identities=18% Similarity=0.150 Sum_probs=145.5
Q ss_pred ccHHHHHHHhcCCHH----HHHHHHhcCCC---------CCCChHHHHHHHHc---CCHHHHHHHHHcCCCCCCCCC---
Q 010590 256 KIRRMRRALDSSDVE----LVKLMVMGEGL---------NLDEALALHYAVEN---CSREVVKALLELGAADVNYPA--- 316 (506)
Q Consensus 256 g~t~L~~A~~~g~~~----~v~~Ll~~~~~---------d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~v~~~~--- 316 (506)
|.||||+|+..|+.+ ++++|+ ..|+ |.+|+||||+|+.. |+.++|++|++.|+ +++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~-~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~-~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLR-WNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDK-DSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHH-HHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHH-HTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHH-HcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCC-cccchhhhc
Confidence 789999999999997 556666 3443 33689999999999 99999999999998 776322
Q ss_pred -------CCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC-------------CCcHHHHHHHHHHHHHHcCCCCCC
Q 010590 317 -------GPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVD-------------GVTPLDILRTLTSDFLFKGAVPGL 376 (506)
Q Consensus 317 -------~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~-------------g~tpLh~A~~~~~~~l~~~~~~~~ 376 (506)
+..|+||||+|+..|+.+++++|+++|++++.+|.. |+||||+|+.
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-------------- 145 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAAC-------------- 145 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHH--------------
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHH--------------
Confidence 157999999999999999999999999999999987 9999999998
Q ss_pred cccCCChHHHHHHHHH---hccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcccc-------cccccc
Q 010590 377 THIEPNKLRLCLELVQ---SAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATIN-------NNSLNL 446 (506)
Q Consensus 377 ~~~~~~~~~~~~~Ll~---~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~-------~~~~~~ 446 (506)
.++.+++++|++ .|++++.+ +..|.||||+|+.... +... ++++++
T Consensus 146 ----~~~~~~v~~Ll~~~~~ga~~n~~-----------d~~g~TpLh~A~~~~~---------~~~~~~~~~~~iv~~Ll 201 (256)
T 2etb_A 146 ----TKQWDVVTYLLENPHQPASLEAT-----------DSLGNTVLHALVMIAD---------NSPENSALVIHMYDGLL 201 (256)
T ss_dssp ----TTCHHHHHHHHHCSSCCCCTTCC-----------CTTSCCHHHHHHHHCC---------SCHHHHHHHHHHHHHHH
T ss_pred ----cCCHHHHHHHHhccccCCCcCcc-----------CCCCCCHHHHHHHccc---------CCchhhHHHHHHHHHHH
Confidence 789999999999 99999988 5567799999853111 1111 334444
Q ss_pred CCCcceee-------ccCCCCCCCcchhhhhcCCC
Q 010590 447 DSSRLVYL-------NLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 447 ~~~~~~~l-------n~~D~~G~T~LH~Aa~~gs~ 474 (506)
..++++ |.+|..|+||||+|+..|..
T Consensus 202 --~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 234 (256)
T 2etb_A 202 --QMGARLCPTVQLEEISNHQGLTPLKLAAKEGKI 234 (256)
T ss_dssp --HHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred --HcCCCcccccccccccCCCCCCHHHHHHHhCCH
Confidence 344667 99999999999999999953
No 31
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.1e-28 Score=232.15 Aligned_cols=176 Identities=23% Similarity=0.235 Sum_probs=153.6
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHhcCC-----CCCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHH
Q 010590 254 DQKIRRMRRALDSSDVELVKLMVMGEG-----LNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAA 328 (506)
Q Consensus 254 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~-----~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~ 328 (506)
..+.+|||.|+..|+.++++.|+...+ .+.+|.||||+|+..|+.+++++|++.|+ +++.+| ..|+||||+|+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~ 81 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV-PVNDKD-DAGWSPLHIAA 81 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCC-TTSCCHHHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC-CCCCcC-CCCCCHHHHHH
Confidence 457899999999999999999994322 25579999999999999999999999999 999998 89999999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCC
Q 010590 329 EMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEP 408 (506)
Q Consensus 329 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~ 408 (506)
..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~~~~Ll~~g~~~~~~-------- 135 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAAS------------------KNRHEIAVMLLEGGANPDAK-------- 135 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC--------
T ss_pred HcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCCCCc--------
Confidence 9999999999999999999999999999999998 78999999999999999887
Q ss_pred CCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 409 SSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 409 ~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+..|.||||.|+... ....+++.+ ..+.++|.+|..|+||||+|+..|+
T Consensus 136 ---~~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~g~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 136 ---DHYDATAMHRAAAKG-----------NLKMVHILL--FYKASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp ---CTTSCCHHHHHHHHT-----------CHHHHHHHH--HTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred ---CCCCCcHHHHHHHcC-----------CHHHHHHHH--hcCCCccccCCCCCCHHHHHHHCCC
Confidence 456779999985322 233344444 2447899999999999999999984
No 32
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=1.1e-30 Score=252.73 Aligned_cols=215 Identities=17% Similarity=0.104 Sum_probs=151.7
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHh---cCCC---------CCCChHHHHHHHHc---CCHHHHHHHHHcCCCCC--
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVM---GEGL---------NLDEALALHYAVEN---CSREVVKALLELGAADV-- 312 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~---------d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~v-- 312 (506)
...|..|.||||+|+..|+.++|+.|++ ..+. |.+|+||||+|+.. |+.++|++|++.|+ ++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga-~~~~ 85 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR-KTDS 85 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH-HTTC
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc-cccc
Confidence 3468899999999999999999999984 2333 34699999999987 99999999999987 53
Q ss_pred -----CC----CCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCC--------------CCCcHHHHHHHHHHHHHH
Q 010590 313 -----NY----PAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTV--------------DGVTPLDILRTLTSDFLF 369 (506)
Q Consensus 313 -----~~----~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~--------------~g~tpLh~A~~~~~~~l~ 369 (506)
|. +| ..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||+|+.
T Consensus 86 ~~~~i~~~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~------- 157 (273)
T 2pnn_A 86 LKQFVNASYTDSY-YKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC------- 157 (273)
T ss_dssp HHHHHTCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHH-------
T ss_pred hhHHhhccccccc-CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHH-------
Confidence 32 45 6899999999999999999999999999999997 79999999998
Q ss_pred cCCCCCCcccCCChHHHHHHHHH---hccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcc--cccccc
Q 010590 370 KGAVPGLTHIEPNKLRLCLELVQ---SAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSAT--INNNSL 444 (506)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~Ll~---~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~--~~~~~~ 444 (506)
.++.+++++|++ .|++++.+ +..|.||||+|+....... .... ..++++
T Consensus 158 -----------~g~~~~v~~Ll~~~~~gad~~~~-----------d~~g~tpLh~A~~~~~~~~----~~~~~~~~~v~~ 211 (273)
T 2pnn_A 158 -----------TNQLAIVKFLLQNSWQPADISAR-----------DSVGNTVLHALVEVADNTV----DNTKFVTSMYNE 211 (273)
T ss_dssp -----------TTCHHHHHHHHHCSSCCCCTTCC-----------CTTSCCHHHHHHHHCCSCH----HHHHHHHHHHHH
T ss_pred -----------cCCHHHHHHHHhcccCCCCceee-----------CCCCCcHHHHHHHccCcch----hHHHHHHHHHHH
Confidence 789999999999 99999988 5567799999853221000 0000 122233
Q ss_pred ccCCCcceeec-------cCCCCCCCcchhhhhcCCCCCCCCCCCCchhhhhhhhcCCCCccccc
Q 010590 445 NLDSSRLVYLN-------LGAGTGNSAHHHHHQMGSSRMDGDDDSSHQSQREAVNRHDPSIYHHH 502 (506)
Q Consensus 445 ~~~~~~~~~ln-------~~D~~G~T~LH~Aa~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (506)
++ ..+.++| .+|..|+||||+|+..|+...- .-..+.|+.+.....+.+..+++|
T Consensus 212 Ll--~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv-~~Ll~~ga~dp~~~~~~~~~~~~~ 273 (273)
T 2pnn_A 212 IL--ILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVL-AYILQREIHEPECRHAAAHHHHHH 273 (273)
T ss_dssp HH--HHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH-HHHHHHHTC---------------
T ss_pred HH--HhhhhcccccccccccCCCCCCHHHHHHHhChHHHH-HHHHHCCCCCchhhhhhhhhccCC
Confidence 44 2345665 5999999999999999953321 122233443333333344444443
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=2e-28 Score=237.00 Aligned_cols=197 Identities=21% Similarity=0.170 Sum_probs=158.0
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHhcCCCCC------CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHH
Q 010590 254 DQKIRRMRRALDSSDVELVKLMVMGEGLNL------DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIA 327 (506)
Q Consensus 254 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~------~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A 327 (506)
.+|.||||+|+..|+.+++++|+ +.|+++ .|+||||+|+..|+.+++++|+++|+ +++.++ ..|+||||+|
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A 79 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRK-KNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTCCCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccC-CCCCCHHHHH
Confidence 46899999999999999999999 566544 47899999999999999999999999 999998 8999999999
Q ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-----HHHHHHHcCCCCCCcc--------------------cCCC
Q 010590 328 AEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT-----LTSDFLFKGAVPGLTH--------------------IEPN 382 (506)
Q Consensus 328 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~-----~~~~~l~~~~~~~~~~--------------------~~~~ 382 (506)
+..|+.+++++|+++|++++.+|..|+||||+|+. ..+.++..|++++... ...+
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 159 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcC
Confidence 99999999999999999999999999999999994 4455566666655431 1135
Q ss_pred hHHHHHHHHHh-ccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCC
Q 010590 383 KLRLCLELVQS-AALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTG 461 (506)
Q Consensus 383 ~~~~~~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G 461 (506)
+.+++++|++. |++++.+ +..|.||||.|+...... ....+..+.+ ..+.++|.+|..|
T Consensus 160 ~~~~v~~Ll~~~~~~~~~~-----------~~~g~t~l~~a~~~~~~~-------~~~~i~~~Ll--~~g~~~~~~~~~g 219 (285)
T 1wdy_A 160 HVEVLKILLDEMGADVNAC-----------DNMGRNALIHALLSSDDS-------DVEAITHLLL--DHGADVNVRGERG 219 (285)
T ss_dssp CHHHHHHHHHTSCCCTTCC-----------CTTSCCHHHHHHHCSCTT-------THHHHHHHHH--HTTCCSSCCCTTS
T ss_pred CHHHHHHHHHhcCCCCCcc-----------CCCCCCHHHHHHHccccc-------hHHHHHHHHH--HcCCCCCCcCCCC
Confidence 56777888876 7777766 556779999874322100 0012233344 3457899999999
Q ss_pred CCcchhhhhcCC
Q 010590 462 NSAHHHHHQMGS 473 (506)
Q Consensus 462 ~T~LH~Aa~~gs 473 (506)
+||||+|+..|+
T Consensus 220 ~t~L~~A~~~~~ 231 (285)
T 1wdy_A 220 KTPLILAVEKKH 231 (285)
T ss_dssp CCHHHHHHHTTC
T ss_pred CcHHHHHHHcCC
Confidence 999999999984
No 34
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=2.6e-28 Score=252.18 Aligned_cols=156 Identities=21% Similarity=0.213 Sum_probs=93.0
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHH
Q 010590 253 EDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIA 327 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A 327 (506)
+..|.||||+|+..|+.+++++|+ +.|+++ .|.||||+|+..|+.++|++|++.|+ +++..+ ..|+||||+|
T Consensus 209 ~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~-~~g~t~L~~A 285 (437)
T 1n11_A 209 AWNGYTPLHIAAKQNQVEVARSLL-QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQA-NGNLGN-KSGLTPLHLV 285 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-CTTCCC-TTCCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC-CCCCCC-CCCCCHHHHH
Confidence 445555566665555555555555 333322 35555555555555555555555555 555555 5555555555
Q ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-----HHHHHHHcCCCCCCccc----------CCChHHHHHHHHH
Q 010590 328 AEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT-----LTSDFLFKGAVPGLTHI----------EPNKLRLCLELVQ 392 (506)
Q Consensus 328 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~-----~~~~~l~~~~~~~~~~~----------~~~~~~~~~~Ll~ 392 (506)
+..|+.+++++|+++|++++.+|..|+||||+|+. .++.++..|++++.... ..++.+++++|++
T Consensus 286 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 365 (437)
T 1n11_A 286 AQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK 365 (437)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHH
Confidence 55555555555555555555555555555555552 33334444444433321 1577788888888
Q ss_pred hccCccccccCCCCCCCCCCccccCCCCCC
Q 010590 393 SAALVLSREEGILNEPSSSTATVIYPPPMS 422 (506)
Q Consensus 393 ~ga~~~~~~~~~~~~~~~~~~~~~tplh~a 422 (506)
+|++++.+ +..|.|||++|
T Consensus 366 ~ga~~~~~-----------~~~g~t~l~~A 384 (437)
T 1n11_A 366 NGASPNEV-----------SSDGTTPLAIA 384 (437)
T ss_dssp TTCCSCCC-----------CSSSCCHHHHH
T ss_pred CcCCCCCC-----------CCCCCCHHHHH
Confidence 88888877 56777999998
No 35
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=5.6e-28 Score=241.29 Aligned_cols=209 Identities=18% Similarity=0.105 Sum_probs=170.3
Q ss_pred HhhcccchhHHHhhcccccccccccccccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHH
Q 010590 219 EDLRHKSSLARRSLISHHHHHHHHDLSAAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAV 293 (506)
Q Consensus 219 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~ 293 (506)
.+..+.|||.........................|..|.||||+|+..|+.+++++|+ +.|+++ .|.||||+|+
T Consensus 54 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll-~~g~~~~~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 54 SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL-KHGACVNAMDLWQFTPLHEAA 132 (351)
T ss_dssp SSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHH
Confidence 3456789998887665544433333333445567889999999999999999999999 667655 4899999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCC-----------------------------------------------------CCCC
Q 010590 294 ENCSREVVKALLELGAADVNYPA-----------------------------------------------------GPAG 320 (506)
Q Consensus 294 ~~g~~~~v~~Ll~~g~~~v~~~~-----------------------------------------------------~~~g 320 (506)
..|+.+++++|+++|+ +++..+ +..|
T Consensus 133 ~~~~~~~v~~Ll~~g~-~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 211 (351)
T 3utm_A 133 SKNRVEVCSLLLSHGA-DPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSH 211 (351)
T ss_dssp HTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTC
T ss_pred HcCCHHHHHHHHHcCC-CCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCC
Confidence 9999999999999999 987643 1457
Q ss_pred ChHHHHHHHh---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCc
Q 010590 321 KTPLHIAAEM---VSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALV 397 (506)
Q Consensus 321 ~tpLh~A~~~---~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~ 397 (506)
+||||+|+.. +..+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|+++
T Consensus 212 ~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~g~~~~v~~Ll~~ga~~ 273 (351)
T 3utm_A 212 ETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAE------------------RAHNDVMEVLHKHGAKM 273 (351)
T ss_dssp CCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH------------------TTCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHH------------------cCCHHHHHHHHHCCCCC
Confidence 8999999998 55899999999999999999999999999998 78999999999999999
Q ss_pred cccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhc
Q 010590 398 LSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQM 471 (506)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~ 471 (506)
+.+ +..|.||||+|+.. +...++++++ ..+.++|.+|..|+||||+|...
T Consensus 274 n~~-----------d~~g~t~L~~A~~~-----------~~~~~v~~Ll--~~gad~~~~~~~g~tal~~a~~~ 323 (351)
T 3utm_A 274 NAL-----------DSLGQTALHRAALA-----------GHLQTCRLLL--SYGSDPSIISLQGFTAAQMGNEA 323 (351)
T ss_dssp TCC-----------CTTSCCHHHHHHHH-----------TCHHHHHHHH--HTTCCTTCCCTTSCCHHHHSCHH
T ss_pred CCc-----------CCCCCCHHHHHHHc-----------CcHHHHHHHH--HcCCCCCCcCCCCCChhhhhhHH
Confidence 988 55677999998532 2233445555 34578999999999999999654
No 36
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=1e-27 Score=214.72 Aligned_cols=130 Identities=33% Similarity=0.459 Sum_probs=117.0
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...|..|.||||+|+..|+.+++++|+ +.|+|+ +|+||||+|+..|+.++|++||++|+ ++|.+| ..|+|||
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga-dvn~~d-~~G~TpL 107 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNAKD-SDGRTPL 107 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcC-CCCCCC-CCCCCHH
Confidence 346889999999999999999999999 677765 58999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
|+|+..|+.++|++|+++|++++.+|.+|+||||+|+. .++.+++++|+++||+++..
T Consensus 108 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~------------------~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 108 HHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLARE------------------HGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHTC-------
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH------------------cCCHHHHHHHHHCCCCcCCC
Confidence 99999999999999999999999999999999999998 78999999999999999864
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=9.5e-28 Score=226.77 Aligned_cols=180 Identities=22% Similarity=0.137 Sum_probs=151.9
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCC---------CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGL---------NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGK 321 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~ 321 (506)
..|..|.||||+|+..|+.++++.|+ +.+. |..|+||||+|+..|+.++|++|+++|+ +++.++ ..|+
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~ 79 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVI-RQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC-DPELRD-FRGN 79 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCC-C-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCC-CSCCCC-TTCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHH-HHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcC-CCCC
Confidence 46889999999999999999999999 3322 2358999999999999999999999999 999999 8999
Q ss_pred hHHHHHHHhCCHHHHHHHHHCCCC------CCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhcc
Q 010590 322 TPLHIAAEMVSPDMVAVLLDHHAD------PNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAA 395 (506)
Q Consensus 322 tpLh~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga 395 (506)
||||+|+..|+.+++++|+++|++ ++..|..|+||||+|+. .++.+++++|++.|+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~ 141 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI------------------HGYLGIVELLVSLGA 141 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHH------------------TTCHHHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCC
Confidence 999999999999999999999986 57789999999999998 789999999999999
Q ss_pred CccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 396 LVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
+++.++. ..|.||||+|+... ...++++++ ..++++|.+|..|+||||+|+..|+.
T Consensus 142 ~~~~~~~----------~~g~tpL~~A~~~~-----------~~~~v~~Ll--~~ga~~~~~~~~g~tpl~~A~~~~~~ 197 (236)
T 1ikn_D 142 DVNAQEP----------CNGRTALHLAVDLQ-----------NPDLVSLLL--KCGADVNRVTYQGYSPYQLTWGRPST 197 (236)
T ss_dssp CTTCCCT----------TTCCCHHHHHHHTT-----------CHHHHHHHH--TTTCCSCCCCTTCCCGGGGCTTSSCH
T ss_pred CCCCCCC----------CCCCCHHHHHHHcC-----------CHHHHHHHH--HcCCCCCcccCCCCCHHHHHHccCch
Confidence 9998732 26779999985322 233445555 34689999999999999999998743
No 38
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=1.3e-28 Score=249.29 Aligned_cols=216 Identities=16% Similarity=0.121 Sum_probs=163.1
Q ss_pred hhcccchhHHHhhcccccccccccccccccccCC-ccccHHHHHHHhcCCHHHHHHHHh-------cCCCCC-----CCh
Q 010590 220 DLRHKSSLARRSLISHHHHHHHHDLSAAAAADLE-DQKIRRMRRALDSSDVELVKLMVM-------GEGLNL-----DEA 286 (506)
Q Consensus 220 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~-------~~~~d~-----~g~ 286 (506)
+..+.|||............ ..........| ..|.||||+|+..|+.+++++|+. +.|+++ +|.
T Consensus 91 ~~~g~t~L~~Aa~~~~~~~~---~L~~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~ 167 (373)
T 2fo1_E 91 EPESPIKLHTEAAGSYAITE---PITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDEN 167 (373)
T ss_dssp ---CCCHHHHHHHSSSCCCS---CCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSC
T ss_pred CCCCccHHHHHhcCCchHHH---HhccccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCC
Confidence 44567777766553321111 11112233445 689999999999999988888762 566654 589
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHHH
Q 010590 287 LALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHH---ADPNVRTVDGVTPLDILRTL 363 (506)
Q Consensus 287 t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~tpLh~A~~~ 363 (506)
||||+|+..|+.++|++|+++|+ +++.++ ..|+||||+|+..|+.+++++|+++| ++++..|..|+||||+|+.
T Consensus 168 TpL~~A~~~g~~~iv~~Ll~~ga-~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~- 244 (373)
T 2fo1_E 168 TPLMLAVLARRRRLVAYLMKAGA-DPTIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH- 244 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTC-CSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH-
T ss_pred CHHHHHHHcChHHHHHHHHHCCC-CCcccC-CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHH-
Confidence 99999999999999999999999 999998 89999999999999999999999998 8999999999999999997
Q ss_pred HHHHHHcCCCCCCcccCCC---hHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcccc
Q 010590 364 TSDFLFKGAVPGLTHIEPN---KLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATIN 440 (506)
Q Consensus 364 ~~~~l~~~~~~~~~~~~~~---~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~ 440 (506)
.+ ..+++++|++.|++++..+. ...+..+..|.||||+|+.. +...
T Consensus 245 -----------------~~~~~~~~~v~~Ll~~g~~~~~~~~---~~~~~~d~~g~t~Lh~A~~~-----------g~~~ 293 (373)
T 2fo1_E 245 -----------------NEGRDQVASAKLLVEKGAKVDYDGA---ARKDSEKYKGRTALHYAAQV-----------SNMP 293 (373)
T ss_dssp -----------------SCSTTHHHHHHHHHHHTCCSSCCSG---GGTSSSSCCCCCTHHHHHSS-----------CCHH
T ss_pred -----------------hCCcchHHHHHHHHHCCCCcccccc---cccCcccccCCCHHHHHHHh-----------CCHH
Confidence 44 89999999999999997532 22334566788888888432 2233
Q ss_pred ccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 441 NNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 441 ~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
++++++. ....++|.+|..|+||||+|+..|+
T Consensus 294 ~v~~Ll~-~~~~~~n~~d~~g~TpL~~A~~~g~ 325 (373)
T 2fo1_E 294 IVKYLVG-EKGSNKDKQDEDGKTPIMLAAQEGR 325 (373)
T ss_dssp HHHHHHH-HSCCCTTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHH-hcCCCccCcCCCCCCHHHHHHHcCC
Confidence 3444442 2236778888888888888888773
No 39
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=1.3e-28 Score=249.42 Aligned_cols=209 Identities=15% Similarity=0.094 Sum_probs=170.7
Q ss_pred hcccchhHHHhhccccccccccc--------ccccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChH
Q 010590 221 LRHKSSLARRSLISHHHHHHHHD--------LSAAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEAL 287 (506)
Q Consensus 221 ~~~~~~l~~a~~~~~~~~~~~l~--------~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t 287 (506)
..+.|||................ .........|..|.||||+|+..|+.++|++|+ +.|+++ +|.|
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~ga~~~~~~~~g~t 201 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM-KAGADPTIYNKSERS 201 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTCCC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHH-HCCCCCcccCCCCCC
Confidence 45788888766544332221111 122334456889999999999999999999999 677755 4899
Q ss_pred HHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCChHHHHHHHhC---CHHHHHHHHHCCCCCCC--------CCCCC
Q 010590 288 ALHYAVENCSREVVKALLELG---AADVNYPAGPAGKTPLHIAAEMV---SPDMVAVLLDHHADPNV--------RTVDG 353 (506)
Q Consensus 288 ~Lh~A~~~g~~~~v~~Ll~~g---~~~v~~~~~~~g~tpLh~A~~~~---~~~~v~~Ll~~ga~~~~--------~d~~g 353 (506)
|||+|+..|+.+++++|++.| + +++..| ..|+||||+|+..+ +.+++++|+++|++++. +|..|
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~d-~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g 279 (373)
T 2fo1_E 202 ALHQAAANRDFGMMVYMLNSTKLKG-DIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG 279 (373)
T ss_dssp HHHHHHHTTCHHHHHHHTTSHHHHH-TTSCCC-TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCC
T ss_pred HHHHHHHCCCHHHHHHHHhcCcccc-ChhhcC-CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccC
Confidence 999999999999999999998 7 999998 89999999999998 89999999999999986 67899
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhc-cCccccccCCCCCCCCCCccccCCCCCCccCccCCCCC
Q 010590 354 VTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSA-ALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNS 432 (506)
Q Consensus 354 ~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~ 432 (506)
+||||+|+. .++.+++++|++.| ++++.+ +..|.||||+|+..
T Consensus 280 ~t~Lh~A~~------------------~g~~~~v~~Ll~~~~~~~n~~-----------d~~g~TpL~~A~~~------- 323 (373)
T 2fo1_E 280 RTALHYAAQ------------------VSNMPIVKYLVGEKGSNKDKQ-----------DEDGKTPIMLAAQE------- 323 (373)
T ss_dssp CCTHHHHHS------------------SCCHHHHHHHHHHSCCCTTCC-----------CTTCCCHHHHHHHH-------
T ss_pred CCHHHHHHH------------------hCCHHHHHHHHHhcCCCccCc-----------CCCCCCHHHHHHHc-------
Confidence 999999997 78999999999887 999887 55677999998532
Q ss_pred CCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 433 SSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
+...++++++ ..++++|.+|..|+||||+|+..|+.
T Consensus 324 ----g~~~iv~~Ll--~~gad~~~~d~~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 324 ----GRIEVVMYLI--QQGASVEAVDATDHTARQLAQANNHH 359 (373)
T ss_dssp ----TCHHHHHHHH--HTTCCSSCCCSSSCCHHHHHHHTTCH
T ss_pred ----CCHHHHHHHH--HcCCCccCCCCCCCCHHHHHHHcCCH
Confidence 2233445555 34589999999999999999999853
No 40
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=5.2e-28 Score=228.10 Aligned_cols=180 Identities=19% Similarity=0.181 Sum_probs=107.2
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC------CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL------DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~------~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
..+..|.||||+|+..|+.+++++|+ +.+.++ .|.||||+|+..|+.+++++|++.|+ +++.++ ..|+|||
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~l 113 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYI-SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGA-DPSLID-GEGCSCI 113 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHH
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHH-HcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCC-CCcccC-CCCCCHH
Confidence 34455555555555555555555555 333322 14555555555555555555555555 555555 5555555
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+.. ....+++.+|++.|++++..+.
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~-----------------~~~~~~~~~L~~~~~~~~~~~~-- 174 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR-----------------THSVDPTRLLLTFNVSVNLGDK-- 174 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-----------------CCSSTTHHHHHHTTCCTTCCCT--
T ss_pred HHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh-----------------CChHHHHHHHHhcCCCcchhhc--
Confidence 555555555555555555555555555555555555531 3335566667777766666522
Q ss_pred CCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 405 LNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 405 ~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
..|.||||+|+... ...++++++ ..++++|.+|..|+||||+|++.|.
T Consensus 175 --------~~g~t~L~~A~~~~-----------~~~~v~~Ll--~~g~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 175 --------YHKNTALHWAVLAG-----------NTTVISLLL--EAGANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp --------TTCCCHHHHHHHHT-----------CHHHHHHHH--HHTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred --------cCCCcHHHHHHHcC-----------CHHHHHHHH--HcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 26778999884322 223344444 3457899999999999999999884
No 41
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.9e-27 Score=217.43 Aligned_cols=130 Identities=24% Similarity=0.256 Sum_probs=119.6
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCC-----CCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLN-----LDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d-----~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...|..|.||||+|+..|+.+++++|+ +.+++ .+|+||||+|+..|+.+++++|++.|+ +++.+| ..|+|||
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L 105 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLV-ENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGS-NVNTKD-FSGKTPL 105 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHH-HHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCC-TTSCCHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHH-HhccccccccccCccHHHHHHHcCCHHHHHHHHHCCC-CCCCCC-CCCCcHH
Confidence 346889999999999999999999999 44443 358999999999999999999999999 999998 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~~ 163 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASK------------------YGRSEIVKKLLELGADISAR 163 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH------------------HTCHHHHHHHHHTTCCTTCB
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------------------cCCHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999999999999999999998 68889999999998877655
No 42
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=6.4e-27 Score=205.81 Aligned_cols=124 Identities=23% Similarity=0.284 Sum_probs=114.8
Q ss_pred ccHHHHHHHhcCCHHHHHHHHhcCCCC----CCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhC
Q 010590 256 KIRRMRRALDSSDVELVKLMVMGEGLN----LDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMV 331 (506)
Q Consensus 256 g~t~L~~A~~~g~~~~v~~Ll~~~~~d----~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~ 331 (506)
..||||.|+..|+.+++++|+ +.|.+ ..|.||||+|+..|+.+++++|++.|+ +++.++ ..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILM-ANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGV-SRDART-KVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH-HHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC-CTTCCC-TTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCC-CCCCCHHHHHHHcC
Confidence 478999999999999999999 44543 358999999999999999999999999 999998 89999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 332 SPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 332 ~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.+
T Consensus 79 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~~ 129 (153)
T 1awc_B 79 HANIVEVLLKHGADVNAKDMLKMTALHWATE------------------HNHQEVVELLIKYGADVHTQ 129 (153)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC
T ss_pred hHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCcccc
Confidence 9999999999999999999999999999998 78999999999988876644
No 43
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=8.3e-29 Score=237.50 Aligned_cols=187 Identities=16% Similarity=0.104 Sum_probs=146.7
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHh---cCCCCCC---------ChHHHHHHH---HcCCHHHHHHHHHcCCCC------
Q 010590 253 EDQKIRRMRRALDSSDVELVKLMVM---GEGLNLD---------EALALHYAV---ENCSREVVKALLELGAAD------ 311 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~d~~---------g~t~Lh~A~---~~g~~~~v~~Ll~~g~~~------ 311 (506)
+..|+||||.|+..|+.+.++.|++ +.+.+++ |+||||+|+ ..|+.++|++|++.|+ +
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~-~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAE-KTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHH-HTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcc-cccchHh
Confidence 5678999999999999996665552 3555443 999999999 6799999999999885 4
Q ss_pred -----CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCC--------------CCCCcHHHHHHHHHHHHHHcCC
Q 010590 312 -----VNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRT--------------VDGVTPLDILRTLTSDFLFKGA 372 (506)
Q Consensus 312 -----v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d--------------~~g~tpLh~A~~~~~~~l~~~~ 372 (506)
++..| ..|+||||+|+..|+.++|++|+++|++++.+| ..|+||||+|+.
T Consensus 81 ~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~---------- 149 (260)
T 3jxi_A 81 FINSPFRDVY-YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAAC---------- 149 (260)
T ss_dssp HHTCCBCCSS-EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHH----------
T ss_pred hhcccccccc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHH----------
Confidence 44444 589999999999999999999999999999999 689999999998
Q ss_pred CCCCcccCCChHHHHHHHHH---hccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCC
Q 010590 373 VPGLTHIEPNKLRLCLELVQ---SAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSS 449 (506)
Q Consensus 373 ~~~~~~~~~~~~~~~~~Ll~---~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (506)
.++.+++++|++ .|++++.+ +..|.||||+|+......... ......++++++ .
T Consensus 150 --------~g~~~~v~~Ll~~~~~ga~~~~~-----------d~~g~TpLh~A~~~~~~~~~~--~~~~~~~v~~Ll--~ 206 (260)
T 3jxi_A 150 --------TNQPHIVHYLTENGHKQADLRRQ-----------DSRGNTVLHALVAIADNTREN--TKFVTKMYDLLL--I 206 (260)
T ss_dssp --------TTCHHHHHHHHHCSSCCCCTTCC-----------CTTSCCHHHHHHHHCCSSHHH--HHHHHHHHHHHH--H
T ss_pred --------cCCHHHHHHHHhccccCCCCccc-----------CCCCCcHHHHHHHhccCchhH--HHHHHHHHHHHH--H
Confidence 789999999999 99999988 556779999985322100000 000012333444 2
Q ss_pred cceee-------ccCCCCCCCcchhhhhcCCC
Q 010590 450 RLVYL-------NLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 450 ~~~~l-------n~~D~~G~T~LH~Aa~~gs~ 474 (506)
.++++ |.+|..|+||||+|+..|..
T Consensus 207 ~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 207 KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred hCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 34556 78999999999999999954
No 44
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=4.1e-28 Score=244.63 Aligned_cols=180 Identities=19% Similarity=0.207 Sum_probs=150.8
Q ss_pred cccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChH
Q 010590 249 AADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTP 323 (506)
Q Consensus 249 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tp 323 (506)
....|..|.||||+||..|+.++|++|+ +.|+++ +|+||||+|+..|+.++|++|+++|+ +++. ..|+||
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~---~~g~t~ 87 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLI-ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE-VHSL---WHGQKP 87 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC-CCCC---BTTBCH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-Cccc---cCCCCH
Confidence 3456889999999999999999999999 667655 48999999999999999999999999 7764 479999
Q ss_pred HHHHHHhCCHHHHHHHHHC----CCCCCC-----------------CCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCC
Q 010590 324 LHIAAEMVSPDMVAVLLDH----HADPNV-----------------RTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPN 382 (506)
Q Consensus 324 Lh~A~~~~~~~~v~~Ll~~----ga~~~~-----------------~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~ 382 (506)
||+|+..|+.+++++|+++ |++++. +|..|+||||+|+. .+
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~------------------~g 149 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVG------------------LG 149 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHH------------------SC
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHH------------------cC
Confidence 9999999999999999999 888877 89999999999998 67
Q ss_pred --hHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCC---CcceeeccC
Q 010590 383 --KLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDS---SRLVYLNLG 457 (506)
Q Consensus 383 --~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ln~~ 457 (506)
+.+++++|++.|++++.+ +..|.||||+|+... ...+++++++. ....++|.+
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~-----------d~~g~t~L~~A~~~g-----------~~~~v~~Ll~~g~~~~~~~~~~~ 207 (364)
T 3ljn_A 150 PEYLEMIKILVQLGASPTAK-----------DKADETPLMRAMEFR-----------NREALDLMMDTVPSKSSLRLDYA 207 (364)
T ss_dssp GGGHHHHHHHHHHTCCTTCC-----------CTTSCCHHHHHHHTT-----------CHHHHHHHHHHCSCSSSCCTTCC
T ss_pred CchHHHHHHHHHcCCCCccc-----------CCCCCCHHHHHHHcC-----------CHHHHHHHHhccccccccccccc
Confidence 899999999999999988 456779999985432 22333333310 122349999
Q ss_pred CCCCCCcchhhhhcCC
Q 010590 458 AGTGNSAHHHHHQMGS 473 (506)
Q Consensus 458 D~~G~T~LH~Aa~~gs 473 (506)
|..|+||||+|+..|+
T Consensus 208 ~~~g~t~L~~A~~~g~ 223 (364)
T 3ljn_A 208 NKQGNSHLHWAILINW 223 (364)
T ss_dssp CTTCCCTTHHHHTTTC
T ss_pred CCCCCcHHHHHHHcCC
Confidence 9999999999999984
No 45
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=7.1e-27 Score=208.50 Aligned_cols=125 Identities=21% Similarity=0.177 Sum_probs=115.0
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCCC-----CCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHH
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGLN-----LDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAE 329 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~d-----~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~ 329 (506)
.|.||||+|+..|+.++++.|+ +.+.+ .+|+||||+|+..|+.+++++|++.|+ +++..+ ..|+||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRI-EQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA-DPQLLG-KGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHH-HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHH-HcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCcC-CCCCcHHHHHHH
Confidence 5789999999999999999999 44443 358999999999999999999999999 999998 899999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 330 MVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 330 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
.|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVH------------------GNHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCCCCc
Confidence 999999999999999999999999999999998 78999999999988877654
No 46
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.9e-26 Score=206.35 Aligned_cols=129 Identities=29% Similarity=0.375 Sum_probs=117.1
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
.....+.+||++|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.+| ..|+||||
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~ 85 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILM-ANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-DVNAVD-HAGMTPLR 85 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccC-CCCCCHHH
Confidence 34567899999999999999999999 667654 58999999999999999999999999 999998 89999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.+
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~~~~~~ 142 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM------------------FGHLEIVEVLLKNGADVNAQ 142 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999999999999999999998 78999999999988876654
No 47
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=2.7e-27 Score=224.42 Aligned_cols=182 Identities=16% Similarity=0.110 Sum_probs=121.4
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHhcCCCCC----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHH
Q 010590 253 EDQKIRRMRRALDSSDVELVKLMVMGEGLNL----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAA 328 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~ 328 (506)
+..|.||||.|+..|+.++++.|+ +.|+++ .|.||||+|+..|+.++|++|++.|+ ++|.+| ..|+||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll-~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d-~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERI-AHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPN-DEGITALHNAV 78 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-SCCCCC-TTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHh-ccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCC-CCCCcC-CCCCCHHHHHH
Confidence 346899999999999999999999 777655 37999999999999999999999999 999999 89999999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCC
Q 010590 329 EMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEP 408 (506)
Q Consensus 329 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~ 408 (506)
..|+.+++++|+++|+++|.+|..|+||||+|+. .++.+++++|+++|++++.++..|
T Consensus 79 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~------------------~~~~~~v~~Ll~~ga~~~~~~~~~---- 136 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAAS------------------CNNVQVCKFLVESGAAVFAMTYSD---- 136 (239)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCCCSSS----
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCcceecCCC----
Confidence 9999999999999999999999999999999998 789999999999999999884332
Q ss_pred CCCCccccCCCCCCccCccCCCCCCCCCccccccccccCC-------CcceeeccCCCCCCCcchhhhhcCCC
Q 010590 409 SSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDS-------SRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 409 ~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
+.||||+|.... .+....+++++.. .........|..|.||+|+|...|..
T Consensus 137 ------~~t~l~~a~~~~---------~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 137 ------MQTAADKCEEME---------EGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDC 194 (239)
T ss_dssp ------CCCHHHHCCSSS---------TTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCE
T ss_pred ------CcchHHHHHHhh---------hccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCCE
Confidence 238888872110 1111122222210 11123344588899999999999953
No 48
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=2.5e-26 Score=203.69 Aligned_cols=121 Identities=24% Similarity=0.269 Sum_probs=112.4
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHH
Q 010590 254 DQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAA 328 (506)
Q Consensus 254 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~ 328 (506)
+...||||+|+..|+.+++++|+ +.|+++ +|+||||+|+. |+.+++++|++.|+ +++.++ ..|+||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGA-NPDLKD-RTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCC-CCCCCC-CCCCCHHHHHH
Confidence 45689999999999999999999 677654 58999999999 99999999999999 999998 89999999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccC
Q 010590 329 EMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAAL 396 (506)
Q Consensus 329 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~ 396 (506)
..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAK------------------EGHLRVVEFLVKHTAS 128 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHHSCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------------------cCCHHHHHHHHHccCC
Confidence 9999999999999999999999999999999998 7899999999999876
No 49
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=5e-26 Score=202.58 Aligned_cols=140 Identities=27% Similarity=0.306 Sum_probs=128.0
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.+..|.||||.|+..|+.++++.|++..+.++ .|+||||+|+..|+.+++++|+++|+ +++.+| ..|+||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA-DVHAKD-KGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCC-CCCccC-CCCCCHHHH
Confidence 47789999999999999999999994344433 47899999999999999999999999 999999 899999999
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCC
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILN 406 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~ 406 (506)
|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~~------ 137 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA------------------KGKYEICKLLLQHGADPTKK------ 137 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC------
T ss_pred HHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCCccc------
Confidence 999999999999999999999999999999999998 78999999999999999988
Q ss_pred CCCCCCccccCCCCCC
Q 010590 407 EPSSSTATVIYPPPMS 422 (506)
Q Consensus 407 ~~~~~~~~~~tplh~a 422 (506)
+..|.||||+|
T Consensus 138 -----~~~g~t~l~~a 148 (165)
T 3twr_A 138 -----NRDGNTPLDLV 148 (165)
T ss_dssp -----CTTSCCTGGGS
T ss_pred -----CCCCCChhHhH
Confidence 55677999997
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=4.2e-28 Score=241.09 Aligned_cols=186 Identities=14% Similarity=0.034 Sum_probs=140.1
Q ss_pred cHHHHHHHhcCCHHHHHHHHhcCCCCC------CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHh
Q 010590 257 IRRMRRALDSSDVELVKLMVMGEGLNL------DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEM 330 (506)
Q Consensus 257 ~t~L~~A~~~g~~~~v~~Ll~~~~~d~------~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~ 330 (506)
.+.+|+|+..+..+++++|+ +.|+|+ +|+||||+|+..|+.++|++||++|+ ++|.+| ..|+||||+|+..
T Consensus 98 ~~~~~~a~~~~~~~~~~~l~-~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Ga-d~n~~d-~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 98 QQQQHVSFDSLLQEVNDAFP-NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS-NRLYGD-NMGESCLVKAVKS 174 (327)
T ss_dssp ------CHHHHHHHHHHHCT-TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTBCC-TTCCCHHHHHHHS
T ss_pred cchhHHHHHhhHHHHHHHHH-hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCcC-CCCCCHHHHHHHh
Confidence 35568889999999999999 666543 58999999999999999999999999 999999 8999999999999
Q ss_pred CC---HHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHh-------------
Q 010590 331 VS---PDMVAVLLDHH-ADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQS------------- 393 (506)
Q Consensus 331 ~~---~~~v~~Ll~~g-a~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~------------- 393 (506)
|+ .++++.|++++ ++++.+|..|+||||+|+.... ..++.++++.|++.
T Consensus 175 g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~--------------~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSG--------------MTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp SHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHT--------------STTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred cccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcc--------------ccccHHHHHHHHHHHHHHHhcccchHH
Confidence 98 78888899886 8899999999999999996211 14677888888877
Q ss_pred -------ccCccccccCCCC--------------CCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcce
Q 010590 394 -------AALVLSREEGILN--------------EPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLV 452 (506)
Q Consensus 394 -------ga~~~~~~~~~~~--------------~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (506)
|++++.++.+|.+ .++..+..|.||||+|+... ...++++++ ..++
T Consensus 241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g-----------~~~~v~~Ll--~~Ga 307 (327)
T 1sw6_A 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLG-----------NISIVDALL--DYGA 307 (327)
T ss_dssp EEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHC-----------CHHHHHHHH--HTTC
T ss_pred HhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcC-----------CHHHHHHHH--HcCC
Confidence 8889998888876 37788999999999985422 233445555 3468
Q ss_pred eeccCCCCCCCcchhhhhcC
Q 010590 453 YLNLGAGTGNSAHHHHHQMG 472 (506)
Q Consensus 453 ~ln~~D~~G~T~LH~Aa~~g 472 (506)
++|.+|.+|+||||+|++.|
T Consensus 308 d~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 308 DPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CTTCCCTTSCCGGGGTCC--
T ss_pred CCcccCCCCCCHHHHHHhcC
Confidence 99999999999999999876
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=5.9e-27 Score=210.10 Aligned_cols=164 Identities=18% Similarity=0.165 Sum_probs=125.9
Q ss_pred ccHHHHHHHhcCCHHHHHHHHhcCCC------CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHH
Q 010590 256 KIRRMRRALDSSDVELVKLMVMGEGL------NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAE 329 (506)
Q Consensus 256 g~t~L~~A~~~g~~~~v~~Ll~~~~~------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~ 329 (506)
+.||||+|+..|+.++++.|+ +.+. |.+|+||||+|+..|+.++|++|+++|+ +++.++ ..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~ 78 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHL-RKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA-DPHILA-KERESALSLAST 78 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHH-TTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCC-TTCCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHH-HcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-Cchhhc-ccCCCHHHHHHH
Confidence 467899999999999999999 4443 3468899999999999999999999999 999998 899999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCC
Q 010590 330 MVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPS 409 (506)
Q Consensus 330 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 409 (506)
.|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++.+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~~--------- 131 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVR------------------GNHVKCVEALLARGADLTTE--------- 131 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC---------
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCCcccc---------
Confidence 999999999999999999999999999999987 68889999999999988877
Q ss_pred CCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCc
Q 010590 410 SSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSA 464 (506)
Q Consensus 410 ~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~ 464 (506)
+..|.||||+|+... ....+++.+ .....++.++..|.||
T Consensus 132 --~~~g~t~l~~A~~~~-----------~~~~~~~L~--~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 132 --ADSGYTPMDLAVALG-----------YRKVQQVIE--NHILKLFQSNLVPADP 171 (172)
T ss_dssp --CTTSCCHHHHHHHHT-----------CHHHHHHHH--HHHHHHSCC-------
T ss_pred --CCCCCCHHHHHHHhC-----------cHHHHHHHH--HHHHHHhcccCCCCCC
Confidence 446678998884321 122233333 3345677777777776
No 52
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=2.9e-26 Score=222.20 Aligned_cols=130 Identities=19% Similarity=0.201 Sum_probs=111.9
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCC-CC-----CChHHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCCC
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGL-NL-----DEALALHYAV-----ENCSREVVKALLELGAADVNYPAGP 318 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-d~-----~g~t~Lh~A~-----~~g~~~~v~~Ll~~g~~~v~~~~~~ 318 (506)
...|..|.||||+|+..|+.+++++|+ +.|+ ++ +|.||||+|+ ..++.+++++|++.|+ +++..+ .
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~-~ 181 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQQLL-DSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGN-INAKAS-Q 181 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSC-TTCCCT-T
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCC-CccccC-C
Confidence 346888999999999999999999999 5554 33 5899999999 6688999999999998 888887 7
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHH-hccCc
Q 010590 319 AGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQ-SAALV 397 (506)
Q Consensus 319 ~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~-~ga~~ 397 (506)
.|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+. .++.+++++|++ .|+++
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~------------------~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACE------------------HGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------HTCHHHHHHHHTSTTCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH------------------CCCHHHHHHHHhcCCCCC
Confidence 89999999999999999999999999999999999999999997 678899999988 66655
Q ss_pred ccc
Q 010590 398 LSR 400 (506)
Q Consensus 398 ~~~ 400 (506)
+.+
T Consensus 244 ~~~ 246 (276)
T 4hbd_A 244 SLT 246 (276)
T ss_dssp TCC
T ss_pred cCc
Confidence 543
No 53
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=7.3e-26 Score=199.43 Aligned_cols=122 Identities=25% Similarity=0.256 Sum_probs=110.8
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCC-----CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHH
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGL-----NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAE 329 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~ 329 (506)
++.||||+|+..|+.++++.|++..+. |.+|+||||+ +..|+.+++++|+++|+ +++.+| ..|+||||+|+.
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~ 77 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGA-SPNVQD-TSGTSPVHDAAR 77 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC-CCCCcC-CCCCCHHHHHHH
Confidence 367999999999999999999954433 3368999999 99999999999999999 999999 899999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcc
Q 010590 330 MVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVL 398 (506)
Q Consensus 330 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~ 398 (506)
.|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++. ++++
T Consensus 78 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQ------------------EGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH------------------HTCHHHHHHHHTT-SCTT
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH------------------hChHHHHHHHHhc-cCCC
Confidence 999999999999999999999999999999998 6889999999986 5444
No 54
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.2e-25 Score=210.62 Aligned_cols=144 Identities=27% Similarity=0.276 Sum_probs=128.2
Q ss_pred cccCCccccHHHHHHHhcCCHHHHHHHHhcCCC---------CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 010590 249 AADLEDQKIRRMRRALDSSDVELVKLMVMGEGL---------NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPA 319 (506)
Q Consensus 249 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~ 319 (506)
....+..|.||||+|+..|+.+++++|++ .+. +.+|.||||+|+..|+.+++++|++.|+ +++..+...
T Consensus 72 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~ 149 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEHRSPTCLRALLD-SAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGA-DIDAVDIKS 149 (241)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTT
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCC-CcccccccC
Confidence 33457889999999999999999999993 322 3358999999999999999999999999 999887568
Q ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccc
Q 010590 320 GKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLS 399 (506)
Q Consensus 320 g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~ 399 (506)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.
T Consensus 150 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 150 GRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG------------------RGLLPLVRTLVRSGADSSL 211 (241)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH------------------HTCHHHHHHHHHTTCCTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------------------cCCHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999999999999997 6889999999999999998
Q ss_pred cccCCCCCCCCCCccccCCCCCCc
Q 010590 400 REEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 400 ~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
+ +..|.||||+|.
T Consensus 212 ~-----------~~~g~tpl~~A~ 224 (241)
T 1k1a_A 212 K-----------NCHNDTPLMVAR 224 (241)
T ss_dssp C-----------CTTSCCTTTTCS
T ss_pred c-----------CCCCCCHHHHHH
Confidence 7 556779999984
No 55
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=3.9e-26 Score=206.31 Aligned_cols=139 Identities=24% Similarity=0.214 Sum_probs=125.1
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHhcCCCC-----CCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHH
Q 010590 254 DQKIRRMRRALDSSDVELVKLMVMGEGLN-----LDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAA 328 (506)
Q Consensus 254 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d-----~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~ 328 (506)
..+.+|||.|+..|+.++++.|++..+.+ .+|+||||+|+..|+.+++++|++.|+ +++.++ ..|+||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA-RINVMN-RGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCCcC-CCCCCHHHHHH
Confidence 46789999999999999999999544543 358999999999999999999999999 999998 89999999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCC
Q 010590 329 EMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEP 408 (506)
Q Consensus 329 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~ 408 (506)
..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.+
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~------------------~~~~~~v~~Ll~~ga~~~~~-------- 134 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADINAVNEHGNVPLHYACF------------------WGQDQVAEDLVANGALVSIC-------- 134 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTTCCSSBC--------
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH------------------cCCHHHHHHHHHCCCCcchh--------
Confidence 9999999999999999999999999999999998 78899999999999999988
Q ss_pred CCCCccccCCCCCCc
Q 010590 409 SSSTATVIYPPPMSC 423 (506)
Q Consensus 409 ~~~~~~~~tplh~a~ 423 (506)
+..|.||||+|+
T Consensus 135 ---~~~g~tpl~~A~ 146 (179)
T 3f6q_A 135 ---NKYGEMPVDKAK 146 (179)
T ss_dssp ---CTTSCCGGGGSC
T ss_pred ---ccCCCCcHHHHH
Confidence 556779999983
No 56
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=2.3e-26 Score=229.27 Aligned_cols=267 Identities=19% Similarity=0.122 Sum_probs=181.8
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhHHHHHHHhHHHHhcCCChhhhhccchHHHHHHH
Q 010590 139 LDTLAAARYFGVEQLALLTQKQLANMVEKASIEDVMKVLIASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIEVVAKI 218 (506)
Q Consensus 139 ~~L~~~A~~~~~~~l~~l~~~~l~~~l~~~~~~~v~~~L~~a~~~~~~~L~~~cl~~i~~~~~~~~~l~~~L~~~~~~~l 218 (506)
..|+.++..-.++-++.+.+.... +.....+...+.|..|...+..++.+. +...+..+....
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~~~iv~~----Ll~~ga~~~~~~----------- 89 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSREDIVEL----LLRHGADPVLRK----------- 89 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTCHHHHHH----HHHTTCCTTCCC-----------
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCC--CCccCCCCCcCHHHHHHHcCCHHHHHH----HHHcCCchhhhc-----------
Confidence 457888888888777666654310 000111122345666666665555443 444433322211
Q ss_pred HhhcccchhHHHhhcccccccccccccccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC---------------
Q 010590 219 EDLRHKSSLARRSLISHHHHHHHHDLSAAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL--------------- 283 (506)
Q Consensus 219 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~--------------- 283 (506)
....+++.........................|..|.||||+|+..|+.+++++|+ +.|+++
T Consensus 90 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll-~~ga~~~~~~~~~~~~~~~~~ 166 (337)
T 4g8k_A 90 --KNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY-KRGANVNLRRKTKEDQERLRK 166 (337)
T ss_dssp --TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCCCC-----CTT
T ss_pred --cCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHH-HcCCCcchhhccccccccccC
Confidence 11122222211111111111111122233456889999999999999999999999 666544
Q ss_pred CChHHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCChHHHHHHHhCC----HHHHHHHHHCCCCCCCCCCCCCcHHH
Q 010590 284 DEALALHYAVENCSREVVKALLE-LGAADVNYPAGPAGKTPLHIAAEMVS----PDMVAVLLDHHADPNVRTVDGVTPLD 358 (506)
Q Consensus 284 ~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~v~~~~~~~g~tpLh~A~~~~~----~~~v~~Ll~~ga~~~~~d~~g~tpLh 358 (506)
.|.||||+|+..|+.++|++||+ .|+ ++|.+| ..|+||||+++..+. ..++++|+++|+++|.+|..|+||||
T Consensus 167 ~g~T~L~~A~~~g~~~~v~~LL~~~ga-d~n~~d-~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~ 244 (337)
T 4g8k_A 167 GGATALMDAAEKGHVEVLKILLDEMGA-DVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 244 (337)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHHSCC-CTTCCC-TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CCCcHHHHHHHCCCHHHHHHHHhccCC-CcCccC-CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 37899999999999999999996 588 999999 899999999887554 46889999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHh-ccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCc
Q 010590 359 ILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQS-AALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSA 437 (506)
Q Consensus 359 ~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~ 437 (506)
+|+. .+..++++.|++. |++++.+ +..|.||||+|+..+
T Consensus 245 ~a~~------------------~~~~~~v~~Ll~~~~~~vn~~-----------d~~G~TpL~~A~~~g----------- 284 (337)
T 4g8k_A 245 LAVE------------------KKHLGLVQRLLEQEHIEINDT-----------DSDGKTALLLAVELK----------- 284 (337)
T ss_dssp HHHH------------------TTCHHHHHHHHTSTTCCTTCB-----------CTTSCBHHHHHHHTT-----------
T ss_pred HHHH------------------hhhhHHHHHHHHhcCCcccCc-----------CCCCCCHHHHHHHcC-----------
Confidence 9998 7889999999985 7899887 556779999995422
Q ss_pred cccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 438 TINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 438 ~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
...+++++++ .++++| +.||||+|+.+|+.
T Consensus 285 ~~~iv~~Ll~--~GAd~n-----~~~~L~~A~~~~~~ 314 (337)
T 4g8k_A 285 LKKIAELLCK--RGASTD-----CGDLVMTARRNYDH 314 (337)
T ss_dssp CHHHHHHHHT--TSCSST-----TCCHHHHHHHTTCH
T ss_pred CHHHHHHHHH--CCCCCC-----CCCHHHHHHHcCCH
Confidence 2334455553 345555 55799999999853
No 57
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=3.9e-26 Score=214.85 Aligned_cols=149 Identities=23% Similarity=0.201 Sum_probs=129.1
Q ss_pred cccCCccccHHHHHHHhcCCHHHHHHHHhcCCCC----------CCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 010590 249 AADLEDQKIRRMRRALDSSDVELVKLMVMGEGLN----------LDEALALHYAVENCSREVVKALLELGAADVNYPAGP 318 (506)
Q Consensus 249 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d----------~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~ 318 (506)
....|..|.||||+|+..|+.+++++|+ +.|++ .+|.||||+|+..|+.+++++|+++|+ +++..+ .
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~ 106 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVLM-EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGA-SVSARA-T 106 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-C
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCC-CCCccc-C
Confidence 3446889999999999999999999999 44443 369999999999999999999999999 999886 4
Q ss_pred -------------CCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHH
Q 010590 319 -------------AGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLR 385 (506)
Q Consensus 319 -------------~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~ 385 (506)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~------------------~~~~~ 168 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILIL------------------QPNKT 168 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT------------------CSCHH
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------------------cCChH
Confidence 79999999999999999999999999999999999999999997 67777
Q ss_pred HH----HHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 386 LC----LELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 386 ~~----~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
++ ++|++.|++++.... .+..+..|.||||+|+
T Consensus 169 ~~~~i~~~Ll~~g~~~~~~~~-----~~~~~~~g~tpl~~A~ 205 (232)
T 2rfa_A 169 FACQMYNLLLSYDGGDHLKSL-----ELVPNNQGLTPFKLAG 205 (232)
T ss_dssp HHHHHHHHHHHTTCSCSSCCG-----GGCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHHhcCCchhhhhh-----hccCCCCCCCHHHHHH
Confidence 66 999999998853211 1234678889999984
No 58
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=2.8e-25 Score=217.17 Aligned_cols=143 Identities=22% Similarity=0.276 Sum_probs=127.4
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-------
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAG------- 317 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~------- 317 (506)
...|..|.||||+||..|+.+++++|+ +.|+++ +|+||||+|+..|+.++|++|+++|+ +++..+.
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~l~ 144 (299)
T 1s70_B 67 NYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGA-HVGAVNSEGDTPLD 144 (299)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCCcCCCCCCHHH
Confidence 345788999999999999999999999 677655 48999999999999999999999999 8887651
Q ss_pred ----------------------------------------------------CCCChHHHHHHHhCCHHHHHHHHHCCCC
Q 010590 318 ----------------------------------------------------PAGKTPLHIAAEMVSPDMVAVLLDHHAD 345 (506)
Q Consensus 318 ----------------------------------------------------~~g~tpLh~A~~~~~~~~v~~Ll~~ga~ 345 (506)
..|.||||+|+..|+.+++++|+++|++
T Consensus 145 ~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d 224 (299)
T 1s70_B 145 IAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224 (299)
T ss_dssp HCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred HHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC
Confidence 3477889999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 346 PNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 346 ~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
++.+|..|+||||+|+. .++.+++++|+++|++++.+ +..|.||||+|+
T Consensus 225 ~~~~d~~g~tpL~~A~~------------------~~~~~~v~~Ll~~gad~~~~-----------d~~g~t~l~~A~ 273 (299)
T 1s70_B 225 VNIKDYDGWTPLHAAAH------------------WGKEEACRILVENLCDMEAV-----------NKVGQTAFDVAD 273 (299)
T ss_dssp TTCCCTTCCCHHHHHHH------------------TTCHHHHHHHHHTTCCTTCC-----------CTTSCCTTTSCC
T ss_pred CCCcCCCCCcHHHHHHh------------------cCCHHHHHHHHHcCCCCCCc-----------CCCCCCHHHHHH
Confidence 99999999999999998 78999999999999999988 556779999983
No 59
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=4e-26 Score=201.48 Aligned_cols=135 Identities=23% Similarity=0.201 Sum_probs=113.0
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCh-HH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKT-PL 324 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~t-pL 324 (506)
..+..|.||||+|+..|+.+++++|+ +.|+++ .|+||||+|+ .|+.+++++|+++|+ +++.+| ..|+| ||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~-~~~~~d-~~g~ttpL 82 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGA-EPNCAD-PATLTRPV 82 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTC-CCCCCC-TTTCCCHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCC-CCCCcC-CCCCcHHH
Confidence 34678999999999999999999999 667655 5899999996 999999999999999 999999 89999 99
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.++..|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~------------------~~~~~~v~~Ll~~ga~~~~~~~~g 144 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEE------------------LGHRDVARYLRAAAGGTRGSNHAR 144 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHH------------------HTCHHHHHHHSSCC----------
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH------------------hCHHHHHHHHHHcCCCCCccCcCc
Confidence 99999999999999999999999999999999999998 688999999999999999997766
Q ss_pred CCC
Q 010590 405 LNE 407 (506)
Q Consensus 405 ~~~ 407 (506)
.++
T Consensus 145 ~t~ 147 (156)
T 1bi7_B 145 IDA 147 (156)
T ss_dssp ---
T ss_pred Ccc
Confidence 644
No 60
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=9.3e-26 Score=194.33 Aligned_cols=125 Identities=22% Similarity=0.183 Sum_probs=117.2
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CChH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPA-GKTP 323 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~-g~tp 323 (506)
...+..|.||||+|+..|+.+++++|+ +.|+++ .|+||||+|+. |+.+++++|+++|+ +++.+| .. |+||
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~-~~~~~~-~~~g~t~ 81 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGA-EPNCAD-PATLTRP 81 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTC-CSSCCB-TTTTBCH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCC-CCCCcC-CCCCCCH
Confidence 456789999999999999999999999 666654 58999999999 99999999999999 999999 78 9999
Q ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccC
Q 010590 324 LHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAAL 396 (506)
Q Consensus 324 Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~ 396 (506)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~------------------~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE------------------QGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHH------------------HTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999998 6889999999999986
No 61
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.92 E-value=8.7e-26 Score=202.89 Aligned_cols=148 Identities=28% Similarity=0.383 Sum_probs=134.7
Q ss_pred hhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCce
Q 010590 6 SLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGV 85 (506)
Q Consensus 6 ~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (506)
.+++.+.+.++.+++++.+|||+|+|+|++|+|||.||+++|+||++||.++|.|+ ...+
T Consensus 16 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~--------------------~~~~ 75 (172)
T 3htm_A 16 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES--------------------KKNR 75 (172)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG--------------------GTTE
T ss_pred CCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc--------------------CCCe
Confidence 35667899999999999999999999999999999999999999999999998886 3578
Q ss_pred EEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 010590 86 IPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANMV 165 (506)
Q Consensus 86 i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~l 165 (506)
|.|+++++++|+.+|+|+|||++.++... +.+++.+|++|+++.++..|++.+...
T Consensus 76 i~l~~~~~~~f~~~l~~~Yt~~~~~~~~~-----------------------~~~ll~~A~~~~~~~l~~~c~~~l~~~- 131 (172)
T 3htm_A 76 VEINDVEPEVFKEMMCFIYTGKAPNLDKM-----------------------ADDLLAAADKYALERLKVMCEDALCSN- 131 (172)
T ss_dssp EEECSSCHHHHHHHHHHHHHSCCTTGGGT-----------------------HHHHHHHHHHTTCHHHHHHHHHHHHHT-
T ss_pred EEecCCCHHHHHHHHHHHhCCCCCCcHHH-----------------------HHHHHHHHHHhCcHHHHHHHHHHHHHh-
Confidence 99999999999999999999998765433 678999999999999999999998744
Q ss_pred hhhhHHHHHHHHHHhhhhhhHHHHHHHhHHHHhc
Q 010590 166 EKASIEDVMKVLIASRKQDMHQLWTTCSHLVAKS 199 (506)
Q Consensus 166 ~~~~~~~v~~~L~~a~~~~~~~L~~~cl~~i~~~ 199 (506)
...++++.++..|..+++..|...|+.|+..+
T Consensus 132 --l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 132 --LSVENAAEILILADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp --CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999875
No 62
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=3.1e-26 Score=219.13 Aligned_cols=143 Identities=24% Similarity=0.212 Sum_probs=126.7
Q ss_pred CCccccHHHHHHHhc---CCHHHHHHHHhcCCCC----------------CCChHHHHHHHHcCCHHHHHHHHHcCCCCC
Q 010590 252 LEDQKIRRMRRALDS---SDVELVKLMVMGEGLN----------------LDEALALHYAVENCSREVVKALLELGAADV 312 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~d----------------~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v 312 (506)
.|..|.||||+|+.. |+.+++++|+ +.|++ .+|.||||+|+..|+.++|++|+++|+ ++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~ 116 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLL-QIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGA-DV 116 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHH-HHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC-CT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHH-hcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCC-CC
Confidence 588999999999999 9999999999 33322 459999999999999999999999999 99
Q ss_pred CCCCCCC-------------CChHHHHHHHhCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 010590 313 NYPAGPA-------------GKTPLHIAAEMVSPDMVAVLLD---HHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGL 376 (506)
Q Consensus 313 ~~~~~~~-------------g~tpLh~A~~~~~~~~v~~Ll~---~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~ 376 (506)
+.++ .. |+||||+|+..|+.+++++|++ +|+++|.+|..|+||||+|+...
T Consensus 117 ~~~~-~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~------------ 183 (256)
T 2etb_A 117 HLRA-CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIA------------ 183 (256)
T ss_dssp TCCC-CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHC------------
T ss_pred Cccc-ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcc------------
Confidence 9998 55 9999999999999999999999 99999999999999999999621
Q ss_pred cccCCChHH-------HHHHHHHhccCc-------cccccCCCCCCCCCCccccCCCCCCcc
Q 010590 377 THIEPNKLR-------LCLELVQSAALV-------LSREEGILNEPSSSTATVIYPPPMSCC 424 (506)
Q Consensus 377 ~~~~~~~~~-------~~~~Ll~~ga~~-------~~~~~~~~~~~~~~~~~~~tplh~a~~ 424 (506)
.++.+ ++++|++.|+++ +.+ +..|.||||+|+.
T Consensus 184 ----~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~-----------d~~g~tpL~~A~~ 230 (256)
T 2etb_A 184 ----DNSPENSALVIHMYDGLLQMGARLCPTVQLEEIS-----------NHQGLTPLKLAAK 230 (256)
T ss_dssp ----CSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCC-----------CTTSCCHHHHHHH
T ss_pred ----cCCchhhHHHHHHHHHHHHcCCCccccccccccc-----------CCCCCCHHHHHHH
Confidence 35555 999999999999 555 6678899999843
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.2e-25 Score=213.00 Aligned_cols=189 Identities=17% Similarity=0.125 Sum_probs=148.2
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.+..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.++|++|+++|+ ++|.+| ..|+||||+
T Consensus 33 ~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~d-~~g~tpL~~ 109 (239)
T 1ycs_B 33 FNPLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGV-NVNAAD-SDGWTPLHC 109 (239)
T ss_dssp ----CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCC-TTCCCHHHH
T ss_pred cCchhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccC-CCCCCHHHH
Confidence 3567899999999999999999999 666654 58999999999999999999999999 999999 899999999
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCC
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGV-TPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGIL 405 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~-tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~ 405 (506)
|+..|+.+++++|+++|++++.+|..|. ||||+|.. ...++.+++++|++.|++++..+..+.
T Consensus 110 A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~----------------~~~g~~~~~~~Ll~~~a~~~~~~~~~~ 173 (239)
T 1ycs_B 110 AASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEE----------------MEEGYTQCSQFLYGVQEKMGIMNKGVI 173 (239)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCS----------------SSTTCCCHHHHHHHHHHHTTTTGGGEE
T ss_pred HHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHH----------------hhhccHHHHHHHHHhhhcccccccceE
Confidence 9999999999999999999999998887 99999831 126788999999999999999877655
Q ss_pred CCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCC--cceeeccCCCCCCCcchhhhhcC
Q 010590 406 NEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSS--RLVYLNLGAGTGNSAHHHHHQMG 472 (506)
Q Consensus 406 ~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ln~~D~~G~T~LH~Aa~~g 472 (506)
.+. .+..+.++++++..... +..+....+.. .-......++.|.+|.++....+
T Consensus 174 ~al--~d~~~~~~~eLa~~~G~-----------~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~~ 229 (239)
T 1ycs_B 174 YAL--WDYEPQNDDELPMKEGD-----------CMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP 229 (239)
T ss_dssp EES--SCBCCSSTTBCCBCSSC-----------EEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC
T ss_pred EEE--eccCCCCCCcccccCCC-----------EEEEEEecCCCCCCEEEEEECCcEEEeehHHeeECC
Confidence 443 36778888888722111 11111111100 11234456788999999987764
No 64
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=2.5e-25 Score=207.95 Aligned_cols=171 Identities=18% Similarity=0.147 Sum_probs=140.7
Q ss_pred cccchhHHHhhcccccccccccccccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCC-----CCCChHHHHHHHHcC
Q 010590 222 RHKSSLARRSLISHHHHHHHHDLSAAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGL-----NLDEALALHYAVENC 296 (506)
Q Consensus 222 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----d~~g~t~Lh~A~~~g 296 (506)
.+.|||.........................+..|.||||+|+..|+.+++++|++.... +.+|.||||+|+..|
T Consensus 24 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 24 TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 103 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhC
Confidence 455666555443332222222222233445678999999999999999999999943322 346899999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 010590 297 SREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGL 376 (506)
Q Consensus 297 ~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~ 376 (506)
+.+++++|+++|+ +++.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 104 ~~~~~~~Ll~~g~-~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------- 167 (223)
T 2f8y_A 104 VEGMLEDLINSHA-DVNAVD-DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAR-------------- 167 (223)
T ss_dssp CHHHHHHHHHTTC-CTTCBC-TTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH--------------
T ss_pred cHHHHHHHHHcCC-CCcCcC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHH--------------
Confidence 9999999999999 999999 899999999999999999999999999999999999999999998
Q ss_pred cccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 377 THIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 377 ~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
.++.+++++|+++|++++.+ +..|.||||+|+
T Consensus 168 ----~~~~~~v~~Ll~~ga~~~~~-----------~~~g~t~l~~A~ 199 (223)
T 2f8y_A 168 ----EGSYETAKVLLDHFANRDIT-----------DHMDRLPRDIAQ 199 (223)
T ss_dssp ----HTCHHHHHHHHHTTCCTTCC-----------CTTCCCHHHHHH
T ss_pred ----cCCHHHHHHHHHcCCCCccc-----------cccCCCHHHHHH
Confidence 68899999999999999887 455679999874
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=3e-25 Score=203.94 Aligned_cols=147 Identities=18% Similarity=0.152 Sum_probs=127.7
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCChH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLE-LGAADVNYPAGPAGKTP 323 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~v~~~~~~~g~tp 323 (506)
...|..|.||||+|+..|+.+++++|+ +.|+++ .|.||||+|+..|+.+++++|++ .++ +++.++ ..|+||
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~-~~g~t~ 109 (201)
T 3hra_A 33 DEVDTEGNTPLNIAVHNNDIEIAKALI-DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATP-DLNKHN-RYGGNA 109 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC-CTTCCC-TTSCCS
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCc-cccccc-CCCCcH
Confidence 345788999999999999999999999 677765 48999999999999999999995 556 999998 899999
Q ss_pred HHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccccc
Q 010590 324 LHIAAEMVSPDMVAVLLDHH-ADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREE 402 (506)
Q Consensus 324 Lh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~ 402 (506)
||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.... ...++.+++++|++.|++++.+
T Consensus 110 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~-------------~~~~~~~~v~~Ll~~ga~~~~~-- 174 (201)
T 3hra_A 110 LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE-------------GNQLYQDIVKLLMENGADQSIK-- 174 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSC-------------CSHHHHHHHHHHHHTTCCTTCC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhcc-------------chhhHHHHHHHHHHCCCCCCcc--
Confidence 99999999999999999998 9999999999999999996200 0011389999999999999988
Q ss_pred CCCCCCCCCCccccCCCCCCc
Q 010590 403 GILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 403 ~~~~~~~~~~~~~~tplh~a~ 423 (506)
+..|.||||+|+
T Consensus 175 ---------~~~g~t~l~~A~ 186 (201)
T 3hra_A 175 ---------DNSGRTAMDYAN 186 (201)
T ss_dssp ---------CTTSCCHHHHHH
T ss_pred ---------CCCCCCHHHHHH
Confidence 456679999884
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=3.1e-26 Score=221.31 Aligned_cols=148 Identities=22% Similarity=0.235 Sum_probs=127.6
Q ss_pred cCCccccHHHHHHHhc---CCHHHHHHHHhcCC----------------CCCCChHHHHHHHHcCCHHHHHHHHHcCCCC
Q 010590 251 DLEDQKIRRMRRALDS---SDVELVKLMVMGEG----------------LNLDEALALHYAVENCSREVVKALLELGAAD 311 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~----------------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~ 311 (506)
..|..|.||||+|+.. |+.+++++|+ +.| .|..|+||||+|+..|+.++|++|+++|+ +
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll-~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga-~ 126 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLL-DVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGA-D 126 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHH-HHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC-C
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHH-HhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCC-C
Confidence 3578999999999987 9999999999 333 23479999999999999999999999999 9
Q ss_pred CCCCCCC--------------CCChHHHHHHHhCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCC
Q 010590 312 VNYPAGP--------------AGKTPLHIAAEMVSPDMVAVLLD---HHADPNVRTVDGVTPLDILRTLTSDFLFKGAVP 374 (506)
Q Consensus 312 v~~~~~~--------------~g~tpLh~A~~~~~~~~v~~Ll~---~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~ 374 (506)
++.++ . .|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..
T Consensus 127 ~~~~~-~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~----------- 194 (273)
T 2pnn_A 127 VQAAA-NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV----------- 194 (273)
T ss_dssp TTCCB-CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH-----------
T ss_pred cCccc-cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc-----------
Confidence 99998 5 79999999999999999999999 9999999999999999999972
Q ss_pred CCcccCCCh---------HHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 375 GLTHIEPNK---------LRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 375 ~~~~~~~~~---------~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
++ .+++++|++.|++++.... .++..+..|.||||+|+
T Consensus 195 -------~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~----~~~~~d~~g~TpL~~A~ 241 (273)
T 2pnn_A 195 -------ADNTVDNTKFVTSMYNEILILGAKLHPTLK----LEEITNRKGLTPLALAA 241 (273)
T ss_dssp -------CCSCHHHHHHHHHHHHHHHHHHHHHCTTCC----GGGCCCTTSCCHHHHHH
T ss_pred -------cCcchhHHHHHHHHHHHHHHhhhhcccccc----cccccCCCCCCHHHHHH
Confidence 22 6889999999999985210 11223677889999984
No 67
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.92 E-value=2.4e-25 Score=213.17 Aligned_cols=171 Identities=16% Similarity=0.208 Sum_probs=136.6
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.++.+|.++.+|||+|+|+|++|+|||+|||++|+||++||.+++.+... ...
T Consensus 12 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~------------------~~~ 73 (256)
T 3hve_A 12 PQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDG------------------STY 73 (256)
T ss_dssp TTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------------------------C
T ss_pred hHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccC------------------CCC
Confidence 68999999999999999999999999999999999999999999999999998873210 357
Q ss_pred eEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANM 164 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~ 164 (506)
+|.++++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|.+.+...
T Consensus 74 ~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~~-----------------------v~~ll~~A~~l~i~~l~~~c~~~L~~~ 130 (256)
T 3hve_A 74 KIELEGISVMVMREILDYIFSGQIRLNEDT-----------------------IQDVVQAADLLLLTDLKTLCCEFLEGC 130 (256)
T ss_dssp EEECSSCCHHHHHHHHHHHHHSCCCCC-CC-----------------------HHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred eEEeCCCCHHHHHHHHhhccCCCCcccHhH-----------------------HHHHHHHHHHHChHHHHHHHHHHHHhh
Confidence 899999999999999999999999887654 678999999999999999999998854
Q ss_pred HhhhhHHHHHHHHHHhhhhhhHHHHHHHhHHHHhc--CCChhhhhccchHHHHHHHH
Q 010590 165 VEKASIEDVMKVLIASRKQDMHQLWTTCSHLVAKS--GLPPEVLAKHLPIEVVAKIE 219 (506)
Q Consensus 165 l~~~~~~~v~~~L~~a~~~~~~~L~~~cl~~i~~~--~~~~~~l~~~L~~~~~~~l~ 219 (506)
+ ..+|++.++..|..+++..|.+.|..|+..+ ......-...++.+.+..+.
T Consensus 131 l---~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL 184 (256)
T 3hve_A 131 I---AAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQKLKEVI 184 (256)
T ss_dssp C---CSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHHHHHHHH
T ss_pred C---CHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHHHHHHHH
Confidence 4 6789999999999999999999999999766 11111223355555555443
No 68
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.92 E-value=4.8e-25 Score=197.60 Aligned_cols=136 Identities=20% Similarity=0.194 Sum_probs=122.5
Q ss_pred cccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChH
Q 010590 249 AADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTP 323 (506)
Q Consensus 249 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tp 323 (506)
....|..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.+| ..|+||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~ 105 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGYTDIVGLLLERDV-DINIYD-WNGGTP 105 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-CTTCCC-TTSCCH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCCC-CCCCCH
Confidence 3445789999999999999999999999 556544 58999999999999999999999999 999999 899999
Q ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccC
Q 010590 324 LHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEG 403 (506)
Q Consensus 324 Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~ 403 (506)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|+++..++..
T Consensus 106 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------------------~~~~~~~~~L~~~~~~~~~~~~~ 167 (172)
T 3v30_A 106 LLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVA------------------LGYRKVQQVIENHILKLFQSNLV 167 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------HTCHHHHHHHHHHHHHHSCC---
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH------------------hCcHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999998 68999999999999999888554
Q ss_pred CC
Q 010590 404 IL 405 (506)
Q Consensus 404 ~~ 405 (506)
|.
T Consensus 168 ~~ 169 (172)
T 3v30_A 168 PA 169 (172)
T ss_dssp --
T ss_pred CC
Confidence 44
No 69
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=2.4e-24 Score=185.40 Aligned_cols=123 Identities=28% Similarity=0.307 Sum_probs=113.0
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
.....+.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.+| ..|+||||
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d-~~g~t~L~ 85 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILM-ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA-DVNAVD-AIGFTPLH 85 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTCCCHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCC-CCCCCHHH
Confidence 44577899999999999999999999 667654 48999999999999999999999999 999999 89999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhc
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSA 394 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~g 394 (506)
+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~------------------~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIG------------------NGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHH------------------CCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999998 78899999999876
No 70
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.92 E-value=4.4e-25 Score=214.05 Aligned_cols=149 Identities=18% Similarity=0.268 Sum_probs=131.6
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEEC---CeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCC
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVE---GRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASR 81 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~---~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~ 81 (506)
++|++.+++.++.+|.++.+|||+|+|+ |++|+|||+|||++|+||++||+++|+|+
T Consensus 13 ~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~-------------------- 72 (279)
T 3i3n_A 13 SSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES-------------------- 72 (279)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-------------------------
T ss_pred HhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc--------------------
Confidence 6899999999999999999999999998 99999999999999999999999999887
Q ss_pred CCceEEcC------CCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHH
Q 010590 82 PTGVIPVN------SVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLAL 155 (506)
Q Consensus 82 ~~~~i~l~------~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~ 155 (506)
...+|+|+ ++++++|+.+|+|+|||++.++... +.+++.+|++|+++.++.
T Consensus 73 ~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~-----------------------v~~ll~~A~~l~i~~L~~ 129 (279)
T 3i3n_A 73 RSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGS-----------------------VHEVLELADRFLLIRLKE 129 (279)
T ss_dssp ---EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTT-----------------------HHHHHHHHHHTTCHHHHH
T ss_pred cCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHH-----------------------HHHHHHHHHHHCcHHHHH
Confidence 35789998 8999999999999999999987654 678999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhhhhHHHHHHHhHHHHhc
Q 010590 156 LTQKQLANMVEKASIEDVMKVLIASRKQDMHQLWTTCSHLVAKS 199 (506)
Q Consensus 156 l~~~~l~~~l~~~~~~~v~~~L~~a~~~~~~~L~~~cl~~i~~~ 199 (506)
.|.+.+...+ ..+|++.++..|..+++..|...|..++..+
T Consensus 130 ~c~~~L~~~l---~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 170 (279)
T 3i3n_A 130 FCGEFLKKKL---HLSNCVAIHSLAHMYTLSQLALKAADMIRRN 170 (279)
T ss_dssp HHHHHHHHHC---CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcC---CcchHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 9999998654 6789999999999999999999999999866
No 71
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.92 E-value=7.2e-25 Score=184.58 Aligned_cols=114 Identities=27% Similarity=0.359 Sum_probs=101.8
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.++.+|+++.+|||+|+++|++|+|||+|||++|+||++||.++|.|+ ...
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~--------------------~~~ 65 (120)
T 2if5_A 6 PDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD--------------------QQN 65 (120)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-------------------------CCS
T ss_pred cchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc--------------------CCc
Confidence 789999999999999999999999999999999999999999999999999999886 357
Q ss_pred eEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQL 161 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l 161 (506)
+|.++++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+
T Consensus 66 ~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~~-----------------------~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 66 VYEIDFVSAEALTALMDFAYTATLTVSTAN-----------------------VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp EEECCSSCHHHHHHHHHHHHHSCCCCCGGG-----------------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eEEeCCCCHHHHHHHHHHHcCCCCccCHHH-----------------------HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 899999999999999999999999876443 678999999999999999998875
No 72
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1.8e-25 Score=203.30 Aligned_cols=130 Identities=15% Similarity=0.096 Sum_probs=101.5
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCCC----CCChHHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGLN----LDEALALHYAVENCSR----EVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~d----~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.+.++|+.|+..|+.+.++.++ +.+.+ ..|+||||+|+..|+. +++++||++|+ ++|.+| ..|+||||+
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~-~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga-dvn~~d-~~g~TpLh~ 81 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELF-EKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGA-DIKSRT-KEGTTLFFP 81 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHH-HHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC-CSSCCC-TTCCCTHHH
T ss_pred ccccHHHHHHHcCCHHHHHHHH-hcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCC-CCCCCC-CCCCcHHHH
Confidence 3567899999999999988888 44443 2488999999988875 48899999999 999998 899999999
Q ss_pred HHHhCC------HHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHH-hccCcc
Q 010590 327 AAEMVS------PDMVAVLLDHHADPNVRTVDGV-TPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQ-SAALVL 398 (506)
Q Consensus 327 A~~~~~------~~~v~~Ll~~ga~~~~~d~~g~-tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~-~ga~~~ 398 (506)
|+..|+ .+++++|+++|||+|.+|..|+ ||||+|+... ....+..+++++|++ .|+|++
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~-------------~~~~~~~~iv~~Ll~~~gad~~ 148 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYF-------------VDENEMIPLYKLIFSQSGLQLL 148 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCC-------------SCHHHHHHHHHHHHTSTTCCTT
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcC-------------CChhhHHHHHHHHHHhcCCCCc
Confidence 998886 5788999999999999999999 9999887410 000123467788888 777776
Q ss_pred cc
Q 010590 399 SR 400 (506)
Q Consensus 399 ~~ 400 (506)
.+
T Consensus 149 ~~ 150 (186)
T 3t8k_A 149 IK 150 (186)
T ss_dssp CC
T ss_pred cc
Confidence 65
No 73
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.2e-24 Score=180.40 Aligned_cols=121 Identities=35% Similarity=0.483 Sum_probs=114.2
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHH
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAE 329 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~ 329 (506)
+|.||||+|+..|+.+++++|+ +.|+++ .|.||||+|+..|+.+++++|++.|+ +++.++ ..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~-~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKD-KNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC-CCcccC-CCCCcHHHHHHH
Confidence 4899999999999999999999 455543 58999999999999999999999999 999998 899999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccC
Q 010590 330 MVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAAL 396 (506)
Q Consensus 330 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~ 396 (506)
.|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|||
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~------------------~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR------------------NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHH------------------cCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999998 7899999999999986
No 74
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=2.2e-24 Score=191.07 Aligned_cols=125 Identities=22% Similarity=0.230 Sum_probs=115.3
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...+..|.||||+|+. |+.+++++|+ +.|+++ .|+||||+|+..|+.+++++|+++|+ +++.+| ..|+|||
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L 107 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLL-LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA-DVNIED-NEGNLPL 107 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHH
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcC-CCCCCHH
Confidence 3457889999999999 9999999999 667655 58999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccC
Q 010590 325 HIAAEMVSPDMVAVLLDHHAD-PNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAAL 396 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~ 396 (506)
|+|+..|+.+++++|+++|++ ++.+|..|+||||+|+. .++.+++++|+++|||
T Consensus 108 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~------------------~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARL------------------YGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHTC--
T ss_pred HHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHH------------------cCCHHHHHHHHHhCCC
Confidence 999999999999999999998 69999999999999998 7899999999999986
No 75
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=2e-25 Score=217.29 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=135.1
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-ChHHHHHH
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAG-KTPLHIAA 328 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g-~tpLh~A~ 328 (506)
.|.||||+|+..|+.+++++|+ +.|+++ .|+||||+|+..|+.+++++|+++|+ +++.++ ..| .||||+|+
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~-~~g~~t~L~~A~ 137 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILL-FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW-RLMFYG-KTGWKTSFYHAV 137 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCG-GGGGCS-SSGGGSHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CCCccC-CCCCCCHHHHHH
Confidence 4899999999999999999999 677765 48999999999999999999999999 999998 788 79999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCC
Q 010590 329 EMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEP 408 (506)
Q Consensus 329 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~ 408 (506)
..|+.+++++|+++|+++... ..|+||||+|+. .++.+++++|+++|++++.+
T Consensus 138 ~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~------------------~g~~~~v~~Ll~~gad~n~~-------- 190 (285)
T 3kea_A 138 MLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIK------------------NGHVDMMILLLDYMTSTNTN-------- 190 (285)
T ss_dssp HTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHH------------------TTCHHHHHHHHHHHHHTCTT--------
T ss_pred HcCCHHHHHHHHhCCCccccc-cCCccHHHHHHH------------------cChHHHHHHHHHcCCCCCcc--------
Confidence 999999999999999887332 289999999998 78999999999999999988
Q ss_pred CCCCccccCC-CCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCC
Q 010590 409 SSSTATVIYP-PPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAG 459 (506)
Q Consensus 409 ~~~~~~~~tp-lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~ 459 (506)
+..|.|| ||+|+... ...++++++ ..++++|.+|.
T Consensus 191 ---~~~g~t~~L~~A~~~~-----------~~~~v~~Ll--~~gad~~~~~~ 226 (285)
T 3kea_A 191 ---NSLLFIPDIKLAIDNK-----------DIEMLQALF--KYDINIYSANL 226 (285)
T ss_dssp ---CCCBCCTTHHHHHHHT-----------CHHHHHHHT--TSCBCSTTTTG
T ss_pred ---cCCCCChHHHHHHHcC-----------CHHHHHHHH--HcCCCCCCCCh
Confidence 4466687 99984322 233445555 34578888883
No 76
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=3.8e-24 Score=195.39 Aligned_cols=154 Identities=19% Similarity=0.220 Sum_probs=128.6
Q ss_pred hhcccchhHHHhhcccccccccccccccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHH
Q 010590 220 DLRHKSSLARRSLISHHHHHHHHDLSAAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVE 294 (506)
Q Consensus 220 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~ 294 (506)
+..+.|||.........................+..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+.
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGKTPLMWSII 110 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHH
Confidence 445666666555443333222222222234456788999999999999999999999 556544 58999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCC
Q 010590 295 NCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVP 374 (506)
Q Consensus 295 ~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~ 374 (506)
.|+.+++++|+++|+ +++.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 111 ~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------------ 176 (192)
T 2rfm_A 111 FGYSEMSYFLLEHGA-NVNDRN-LEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARI------------ 176 (192)
T ss_dssp HTCHHHHHHHHHTTC-CSSCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH------------
T ss_pred cCCHHHHHHHHHCCC-CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH------------
Confidence 999999999999999 999999 899999999999999999999999999999999999999999998
Q ss_pred CCcccCCChHHHHHHHHHhc
Q 010590 375 GLTHIEPNKLRLCLELVQSA 394 (506)
Q Consensus 375 ~~~~~~~~~~~~~~~Ll~~g 394 (506)
.++.+++++|++.|
T Consensus 177 ------~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 177 ------FGRQEVIKIFTEVR 190 (192)
T ss_dssp ------TTCHHHHHHHHHHH
T ss_pred ------hCcHHHHHHHHhcc
Confidence 78999999999876
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=1.7e-25 Score=214.46 Aligned_cols=158 Identities=22% Similarity=0.224 Sum_probs=125.8
Q ss_pred CCccccHHHHHHH---hcCCHHHHHHHHhcCCC----------------CCCChHHHHHHHHcCCHHHHHHHHHcCCCCC
Q 010590 252 LEDQKIRRMRRAL---DSSDVELVKLMVMGEGL----------------NLDEALALHYAVENCSREVVKALLELGAADV 312 (506)
Q Consensus 252 ~~~~g~t~L~~A~---~~g~~~~v~~Ll~~~~~----------------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v 312 (506)
.+..|.||||+|+ ..|+.+++++|+ +.|+ |.+|+||||+|+..|+.++|++|+++|+ ++
T Consensus 42 ~~~~g~t~L~~A~~~~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~ 119 (260)
T 3jxi_A 42 EPSTGKTCLPKALLNLSAGRNDTIPILL-DIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGA-DV 119 (260)
T ss_dssp CTTTCCCHHHHHHTSCBTTBCTHHHHHH-HHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTC-CT
T ss_pred ccCCCCcHHHHHHHHhhcCCHHHHHHHH-HhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCC-Cc
Confidence 4577999999999 779999999999 3321 2268999999999999999999999999 99
Q ss_pred CCCCC-------------CCCChHHHHHHHhCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 010590 313 NYPAG-------------PAGKTPLHIAAEMVSPDMVAVLLD---HHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGL 376 (506)
Q Consensus 313 ~~~~~-------------~~g~tpLh~A~~~~~~~~v~~Ll~---~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~ 376 (506)
+.++. ..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..... .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~---------~ 190 (260)
T 3jxi_A 120 HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADN---------T 190 (260)
T ss_dssp TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCS---------S
T ss_pred CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccC---------c
Confidence 99872 379999999999999999999999 9999999999999999999962100 0
Q ss_pred cccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCcc
Q 010590 377 THIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCC 424 (506)
Q Consensus 377 ~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~ 424 (506)
........+++++|+++|++++... ...+..+..|.||||+|+.
T Consensus 191 ~~~~~~~~~~v~~Ll~~ga~~~~~~----~~~~~~d~~g~tpL~~A~~ 234 (260)
T 3jxi_A 191 RENTKFVTKMYDLLLIKCAKLFPDT----NLEALLNNDGLSPLMMAAK 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTC----CGGGCCCTTSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCccccccc----chhhcccCCCCCHHHHHHH
Confidence 0000001589999999999995321 0112246788899999853
No 78
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=3.1e-24 Score=191.31 Aligned_cols=131 Identities=22% Similarity=0.280 Sum_probs=120.7
Q ss_pred cccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChH
Q 010590 249 AADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTP 323 (506)
Q Consensus 249 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tp 323 (506)
....|..|.||||+|+..|+.+++++|+ +.|+++ .|.||||+|+..|+.+++++|+++|+ +++.+| ..|+||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~ 105 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV-DVNEYD-WNGGTP 105 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCC-TTSCCH
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCcCC-CCCCCH
Confidence 3456789999999999999999999999 567654 48899999999999999999999999 999998 899999
Q ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 324 LHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 324 Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++++++...
T Consensus 106 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~------------------~~~~~~~~~L~~~~~~~~~~ 164 (167)
T 3v31_A 106 LLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVA------------------LGYRSVQQVIESHLLKLLQN 164 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------HTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------------------cCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 68899999999998876544
No 79
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=4.6e-25 Score=219.17 Aligned_cols=157 Identities=15% Similarity=0.098 Sum_probs=115.7
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCC---HHHHHHHHHcC-CCCCCCCCCCCCCh
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCS---REVVKALLELG-AADVNYPAGPAGKT 322 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~---~~~v~~Ll~~g-~~~v~~~~~~~g~t 322 (506)
.|..|.||||+||..|+.++|++|| +.|+|+ +|+||||+|+..|+ .++++.|++.+ + +++.+| ..|+|
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll-~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~-~~~~~d-~~g~t 203 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLV-KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP-CLILED-SMNRT 203 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG-GGGEEC-TTCCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc-cccCCC-CCCCC
Confidence 5889999999999999999999999 777766 48999999999998 78889999988 6 899999 89999
Q ss_pred HHHHHHH----hCCHHHHHHHHHC--------------------CCCCCCCCCCCCcHHHHHHHHHHHHHHc--------
Q 010590 323 PLHIAAE----MVSPDMVAVLLDH--------------------HADPNVRTVDGVTPLDILRTLTSDFLFK-------- 370 (506)
Q Consensus 323 pLh~A~~----~~~~~~v~~Ll~~--------------------ga~~~~~d~~g~tpLh~A~~~~~~~l~~-------- 370 (506)
|||+|+. .|+.+++++|++. |++++.+|..|+||||+|+. ...++..
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~-~~~Ll~~~~n~~d~~ 282 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD-LKWIIANMLNAQDSN 282 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS-HHHHHHHTTTCCCTT
T ss_pred HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH-HHHHHHhCCCCCCCC
Confidence 9999999 8999999999987 55544444444444444442 1111111
Q ss_pred CCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 371 GAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
|..|...+...++.+++++|+++|+|++.+ +..|.||||+|+
T Consensus 283 G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~-----------d~~G~TpL~~A~ 324 (327)
T 1sw6_A 283 GDTCLNIAARLGNISIVDALLDYGADPFIA-----------NKSGLRPVDFGA 324 (327)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHHTTCCTTCC-----------CTTSCCGGGGTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCccc-----------CCCCCCHHHHHH
Confidence 111111122268899999999999999988 556779999984
No 80
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.91 E-value=4.4e-24 Score=181.60 Aligned_cols=114 Identities=25% Similarity=0.323 Sum_probs=105.8
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
.+|++.+++.|+.+|+++.+|||+|+++|++|+|||+|||++|+||++||.+++.|. ..
T Consensus 10 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~---------------------~~ 68 (127)
T 1r29_A 10 TRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRN---------------------LS 68 (127)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTT---------------------CS
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCC---------------------CC
Confidence 689999999999999999999999999999999999999999999999999988772 47
Q ss_pred eEEc-CCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 010590 85 VIPV-NSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLA 162 (506)
Q Consensus 85 ~i~l-~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~ 162 (506)
+|.| +++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+.
T Consensus 69 ~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~~-----------------------~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 69 VINLDPEINPEGFNILLDFMYTSRLNLREGN-----------------------IMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHSCCCCCTTT-----------------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHcCCCcCcCHHH-----------------------HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 8999 99999999999999999999886543 6789999999999999999998875
No 81
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=182.11 Aligned_cols=111 Identities=27% Similarity=0.345 Sum_probs=102.2
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
.+|++.+++.++.+|+++.+|||+|+++|++|+|||+|||++||||++||.+++ ..
T Consensus 5 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~------------------------~~ 60 (119)
T 3b84_A 5 VQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS------------------------GG 60 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT------------------------CC
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC------------------------CC
Confidence 689999999999999999999999999999999999999999999999998865 25
Q ss_pred eEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLA 162 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~ 162 (506)
+|.|+++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+.
T Consensus 61 ~i~l~~~~~~~f~~ll~~iYtg~~~~~~~~-----------------------v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 61 SVVLPAGFAEIFGLLLDFFYTGHLALTSGN-----------------------RDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp CEEECGGGHHHHHHHHHHHHHSCCCCCTTT-----------------------HHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred eEEeCCCCHHHHHHHHHHHcCCCCccCHHH-----------------------HHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 799999999999999999999999887554 6789999999999999999998764
No 82
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=2.6e-24 Score=194.25 Aligned_cols=134 Identities=19% Similarity=0.229 Sum_probs=123.6
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...+..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.+| ..|+|||
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d-~~g~t~L 109 (179)
T 3f6q_A 33 NQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKA-DINAVN-EHGNVPL 109 (179)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHH
T ss_pred cccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccC-CCCCCHH
Confidence 345788999999999999999999999 667655 48999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++++..+.++
T Consensus 110 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~------------------~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 110 HYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKA------------------PLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCH------------------HHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred HHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHH------------------HHHHHHHHHHHHhhcCcccCCccc
Confidence 99999999999999999999999999999999999987 567789999999999999876544
No 83
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.91 E-value=1.8e-24 Score=187.76 Aligned_cols=116 Identities=22% Similarity=0.276 Sum_probs=101.3
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.|+.||+++.+|||+|+|+|++|+|||+|||++|+||++||.+++.|... ...
T Consensus 28 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~------------------~~~ 89 (144)
T 2ppi_A 28 PQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDG------------------STY 89 (144)
T ss_dssp TTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----------------------CCC
T ss_pred cchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccC------------------CCc
Confidence 78999999999999999999999999999999999999999999999999988875310 357
Q ss_pred eEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQL 161 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l 161 (506)
+|.|+++++++|+.+|+|+|||++.++.+. +.+|+.+|++|+++.++..|++.|
T Consensus 90 ~I~l~~v~~~~f~~lL~fiYtg~~~i~~~~-----------------------v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 90 KIELEGISVMVMREILDYIFSGQIRLNEDT-----------------------IQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp EEECCSSCHHHHHHHHHHHTTSCCCCCTTT-----------------------HHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred EEEeCCCCHHHHHHHHHHHhCCCCCCCHHH-----------------------HHHHHHHHHHhCcHHHHHHHHHHh
Confidence 899999999999999999999999876543 678999999999999999998764
No 84
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.90 E-value=3.8e-24 Score=180.31 Aligned_cols=112 Identities=23% Similarity=0.276 Sum_probs=103.2
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.++.+|+++.+|||+|+++|++|+|||+|||++||||++||.++ ..
T Consensus 9 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-------------------------~~ 63 (121)
T 1buo_A 9 PSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-------------------------SQ 63 (121)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-------------------------CS
T ss_pred cchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-------------------------Cc
Confidence 78999999999999999999999999999999999999999999999999763 25
Q ss_pred eEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANM 164 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~ 164 (506)
+|+++++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+.++
T Consensus 64 ~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~~-----------------------~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 64 HYTLDFLSPKTFQQILEYAYTATLQAKAED-----------------------LDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp EEEECSSCHHHHHHHHHHHHHSCCCCCGGG-----------------------HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHhhcCCCcCCCHHH-----------------------HHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 799999999999999999999999876443 678999999999999999999988754
No 85
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=3.6e-24 Score=190.47 Aligned_cols=124 Identities=30% Similarity=0.371 Sum_probs=113.4
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...+..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.+| ..|+|||
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L 112 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGA-VVNVAD-LWKFTPL 112 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTCCCHH
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCC-CCCCcC-CCCCCHH
Confidence 345678899999999999999999999 667655 58999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhcc
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAA 395 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga 395 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+ .++.+++++|+++||
T Consensus 113 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~-------------------~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 113 HEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK-------------------DGDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSC-------------------TTCHHHHHHHHTC--
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHh-------------------cCChHHHHHHhhccc
Confidence 9999999999999999999999999999999999986 477799999999886
No 86
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=1.3e-23 Score=187.87 Aligned_cols=123 Identities=28% Similarity=0.314 Sum_probs=114.9
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
..|..|.||||+|+..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.+| ..|+||||
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~-~~g~t~L~ 118 (169)
T 2y1l_E 42 AEDASGWTPLHLAAFNGHLEIVEVLL-KNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA-DVNAND-MEGHTPLH 118 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCC-CCCCCHHH
Confidence 45788999999999999999999999 667654 58999999999999999999999999 999998 89999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhc
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSA 394 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~g 394 (506)
+|+..|+.+++++|+++|++++.+|..|.||||+|+. .++.+++++|++.|
T Consensus 119 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~------------------~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 119 LAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISID------------------NGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHTC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------------------hCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999998 78999999999876
No 87
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.90 E-value=4e-25 Score=192.72 Aligned_cols=137 Identities=30% Similarity=0.411 Sum_probs=101.7
Q ss_pred hHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceE
Q 010590 7 LRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVI 86 (506)
Q Consensus 7 ~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i 86 (506)
+++.+.+.++.+++++.+|||+|+++|+.|+|||.||+++|+||++||.+++.|+ ...+|
T Consensus 8 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~--------------------~~~~i 67 (145)
T 4eoz_A 8 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES--------------------KKNRV 67 (145)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHH--------------------HHTEE
T ss_pred ChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCC--------------------CCceE
Confidence 4567899999999999999999999999999999999999999999999988775 35789
Q ss_pred EcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHh
Q 010590 87 PVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANMVE 166 (506)
Q Consensus 87 ~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~l~ 166 (506)
.++++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+...+
T Consensus 68 ~l~~~~~~~~~~~l~~~Y~~~~~~~~~~-----------------------~~~ll~~A~~~~~~~l~~~c~~~l~~~l- 123 (145)
T 4eoz_A 68 EINDVEPEVFKEMMCFIYTGKAPNLDKM-----------------------ADDLLAAADKYALERLKVMCEDALCSNL- 123 (145)
T ss_dssp EECSSCHHHHHHHHHHHHHSCCTTGGGT-----------------------HHHHHHHHHHTTCHHHHHHHHCC------
T ss_pred EecCCCHHHHHHHHHhhccCccCCcHHH-----------------------HHHHHHHHHHhCHHHHHHHHHHHHHHhC-
Confidence 9999999999999999999998765433 6789999999999999999999987554
Q ss_pred hhhHHHHHHHHHHhhhhhhHHHH
Q 010590 167 KASIEDVMKVLIASRKQDMHQLW 189 (506)
Q Consensus 167 ~~~~~~v~~~L~~a~~~~~~~L~ 189 (506)
+.++++.++..|..+++.+|+
T Consensus 124 --~~~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 124 --SVENAAEILILADLHSADQLK 144 (145)
T ss_dssp -----------------------
T ss_pred --CHHHHHHHHHHHHHhCHHHhc
Confidence 788999999999999988876
No 88
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=3.9e-24 Score=201.29 Aligned_cols=149 Identities=19% Similarity=0.094 Sum_probs=128.6
Q ss_pred CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Q 010590 284 DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTL 363 (506)
Q Consensus 284 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~ 363 (506)
+|.||||+|+..|+.++|++|++.|+ ++|.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~- 96 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMN-DPSQPN-EEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAAS- 96 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSS-CTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCC-CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-
Confidence 57899999999999999999999999 999998 899999999999999999999999999999999999999999998
Q ss_pred HHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccc
Q 010590 364 TSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNS 443 (506)
Q Consensus 364 ~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~ 443 (506)
.++.+++++|++.|++++.++ +..|.||||+|+. ...+...+++
T Consensus 97 -----------------~g~~~~v~~Ll~~ga~~~~~~----------~~~g~tpL~~A~a---------~~~~~~~~v~ 140 (229)
T 2vge_A 97 -----------------CNDTVICMALVQHGAAIFATT----------LSDGATAFEKCDP---------YREGYADCAT 140 (229)
T ss_dssp -----------------TTCHHHHHHHHTTTCCTTCCC----------SSTTCCTGGGCCT---------TSTTHHHHHH
T ss_pred -----------------cCCHHHHHHHHHcCCCccccc----------CCCCCCHHHHHHH---------HhcChHHHHH
Confidence 789999999999999999873 2477899999821 1122334445
Q ss_pred cccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 444 LNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 444 ~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
+++ +.+.++|.+|..|.||||.++..+.
T Consensus 141 ~Ll--~~ga~~~~~~~~~~~~l~~~~~~~~ 168 (229)
T 2vge_A 141 YLA--DVEQSMGLMNSGAVYALWDYSAEFG 168 (229)
T ss_dssp HHH--HHHHHTTTSGGGEEEESSCBCCSST
T ss_pred HHH--HcCCCcccccCCchHHHHHHhhccc
Confidence 555 3557899999999999997666653
No 89
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=2e-23 Score=196.52 Aligned_cols=171 Identities=16% Similarity=0.096 Sum_probs=140.5
Q ss_pred hcccchhHHHhhccccccccccccccc-ccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHH
Q 010590 221 LRHKSSLARRSLISHHHHHHHHDLSAA-AAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVE 294 (506)
Q Consensus 221 ~~~~~~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~ 294 (506)
..+.|||.................... .....+..|.||||+|+..|+.+++++|+ +.|+++ .|.||||+|+.
T Consensus 40 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~ 118 (240)
T 3eu9_A 40 KENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHLAAQ 118 (240)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHH
Confidence 456788877665543333222221112 22233455899999999999999999999 666654 48899999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCC-HHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHHHHHHHHcCC
Q 010590 295 NCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVS-PDMVAVLLDHHADPNVRTV-DGVTPLDILRTLTSDFLFKGA 372 (506)
Q Consensus 295 ~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~-~~~v~~Ll~~ga~~~~~d~-~g~tpLh~A~~~~~~~l~~~~ 372 (506)
.|+.+++++|+++|+ +++.++ ..|.||||+|+..++ .+++++|++.|++++..+. .|+||||+|+.
T Consensus 119 ~~~~~~~~~Ll~~~~-~~~~~~-~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~---------- 186 (240)
T 3eu9_A 119 FGHTSIVAYLIAKGQ-DVDMMD-QNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVL---------- 186 (240)
T ss_dssp TTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHH----------
T ss_pred cCHHHHHHHHHhcCC-CccccC-CCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHH----------
Confidence 999999999999999 999998 899999999997776 8999999999999999997 99999999998
Q ss_pred CCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 373 VPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 373 ~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
.++.+++++|+++|++++.+ +..|.||||+|+
T Consensus 187 --------~~~~~~v~~Ll~~g~~~~~~-----------~~~g~t~l~~A~ 218 (240)
T 3eu9_A 187 --------AGNTTVISLLLEAGANVDAQ-----------NIKGESALDLAK 218 (240)
T ss_dssp --------HTCHHHHHHHHHHTCCTTCB-----------CTTSCBHHHHHH
T ss_pred --------cCCHHHHHHHHHcCCCCCCc-----------CCCCCCHHHHHH
Confidence 68899999999999999988 456679999884
No 90
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=176.05 Aligned_cols=111 Identities=22% Similarity=0.301 Sum_probs=100.9
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.++.+|+++.+|||+|+++|++|+|||.|||++|+||++||.++ . ..
T Consensus 3 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~--~----------------------~~ 58 (116)
T 2vpk_A 3 SHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST--S----------------------EN 58 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC--C----------------------CS
T ss_pred hhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC--C----------------------CC
Confidence 68999999999999999999999999999999999999999999999999875 1 24
Q ss_pred eEEcC--CCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 010590 85 VIPVN--SVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLA 162 (506)
Q Consensus 85 ~i~l~--~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~ 162 (506)
.|.|+ ++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+.
T Consensus 59 ~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~~-----------------------v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 59 NVFLDQSQVKADGFQKLLEFIYTGTLNLDSWN-----------------------VKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CEECCTTTCCHHHHHHHHHHHHHSCCCCCTTT-----------------------HHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred eEEeecCCCCHHHHHHHHHHHcCCCcccCHHH-----------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 57777 9999999999999999999886543 7789999999999999999998763
No 91
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=4.6e-23 Score=181.01 Aligned_cols=118 Identities=23% Similarity=0.225 Sum_probs=109.9
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.+..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.+| ..|+||||+
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~ 106 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGA-DVNAKD-MLKMTALHW 106 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC-CTTCCC-TTSCCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCC-CCCCCC-CCCCCHHHH
Confidence 4678999999999999999999999 677655 48999999999999999999999999 999999 899999999
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHH
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLEL 390 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L 390 (506)
|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|
T Consensus 107 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------------------~~~~~i~~~L 152 (153)
T 1awc_B 107 ATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISID------------------NGNEDLAEIL 152 (153)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH------------------cCCHHHHHHh
Confidence 999999999999999999999999999999999998 6777777665
No 92
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.90 E-value=9.6e-24 Score=182.09 Aligned_cols=115 Identities=23% Similarity=0.263 Sum_probs=105.3
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
.+|++.+++.|+.||+++.+|||+|+|+|++|+|||+|||++|+||++||.+++.|+ .
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~----------------------~ 74 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE----------------------L 74 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT----------------------E
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC----------------------c
Confidence 689999999999999999999999999999999999999999999999999988653 5
Q ss_pred eEEcC-CCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 010590 85 VIPVN-SVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLAN 163 (506)
Q Consensus 85 ~i~l~-~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~ 163 (506)
.|.++ ++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|.+.+..
T Consensus 75 ~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~~-----------------------v~~ll~~A~~~~i~~L~~~C~~~l~~ 131 (138)
T 2z8h_A 75 TVTLPEEVTVKGFEPLIQFAYTAKLILSKDN-----------------------VDEVCRCVEFLSVHNIEESCFQFLKF 131 (138)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHSCCCCCTTT-----------------------HHHHHHHHHHHTCGGGHHHHHHHTTC
T ss_pred eEEeCCCCCHHHHHHHHHHhcCCCcccCHHH-----------------------HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 78995 8999999999999999999887554 67899999999999999999998764
Q ss_pred H
Q 010590 164 M 164 (506)
Q Consensus 164 ~ 164 (506)
.
T Consensus 132 ~ 132 (138)
T 2z8h_A 132 K 132 (138)
T ss_dssp C
T ss_pred h
Confidence 3
No 93
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.89 E-value=5.5e-24 Score=182.77 Aligned_cols=115 Identities=25% Similarity=0.337 Sum_probs=100.2
Q ss_pred hhhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 010590 4 EESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPT 83 (506)
Q Consensus 4 ~~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 83 (506)
..+|++.+++.|+.+|+++.+|||+|+|+|++|+|||+|||++|+||++||.+++ .
T Consensus 5 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~------------------------~ 60 (135)
T 2yy9_A 5 SSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT------------------------G 60 (135)
T ss_dssp --CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC----------------------------
T ss_pred cccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC------------------------C
Confidence 3689999999999999999999999999999999999999999999999998865 1
Q ss_pred ceEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 010590 84 GVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLAN 163 (506)
Q Consensus 84 ~~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~ 163 (506)
.+|.|+++++++|+.+|+|+|||++.++.+. +.+|+.+|++|+++.++..|++.+.+
T Consensus 61 ~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~-----------------------v~~ll~~A~~l~i~~L~~~C~~~l~~ 117 (135)
T 2yy9_A 61 GSVVLPAGFAEIFGLLLDFFYTGHLALTSGN-----------------------RDQVLLAAKELRVPEAVELCQSFQPQ 117 (135)
T ss_dssp CCEEECGGGHHHHHHHHHHHHHSCCCCCTTT-----------------------HHHHHHHHHHTTCHHHHHHHHHCCC-
T ss_pred CeEEeCCCCHHHHHHHHHHHhCCCCCCCHHH-----------------------HHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 4699999999999999999999999887554 67899999999999999999998765
Q ss_pred HH
Q 010590 164 MV 165 (506)
Q Consensus 164 ~l 165 (506)
.+
T Consensus 118 ~l 119 (135)
T 2yy9_A 118 TS 119 (135)
T ss_dssp --
T ss_pred hc
Confidence 54
No 94
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.89 E-value=8.2e-24 Score=208.59 Aligned_cols=147 Identities=29% Similarity=0.402 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceE
Q 010590 7 LRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVI 86 (506)
Q Consensus 7 ~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i 86 (506)
.++.+.+.+..|++++.+|||+|+|+|++|+|||+|||++||||++||.++|.|+ ...+|
T Consensus 157 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~--------------------~~~~i 216 (312)
T 3hqi_A 157 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES--------------------KKNRV 216 (312)
T ss_dssp CCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-------------------------CCSEE
T ss_pred CCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc--------------------CCceE
Confidence 3557889999999999999999999999999999999999999999999999887 35789
Q ss_pred EcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHh
Q 010590 87 PVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANMVE 166 (506)
Q Consensus 87 ~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~l~ 166 (506)
.|+++++++|+.+|+|+|||++.+.. ..+.+|+.+|++|+++.++.+|++.|..
T Consensus 217 ~l~~~~~~~f~~~L~~iYt~~~~~~~-----------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~--- 270 (312)
T 3hqi_A 217 EINDVEPEVFKEMMCFIYTGKAPNLD-----------------------KMADDLLAAADKYALERLKVMCEDALCS--- 270 (312)
T ss_dssp EECSSCHHHHHHHHHHHHHSCCTTHH-----------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHT---
T ss_pred EecCCCHHHHHHHHHhhcCCCCCChH-----------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHc---
Confidence 99999999999999999999986542 4578999999999999999999999874
Q ss_pred hhhHHHHHHHHHHhhhhhhHHHHHHHhHHHHhc
Q 010590 167 KASIEDVMKVLIASRKQDMHQLWTTCSHLVAKS 199 (506)
Q Consensus 167 ~~~~~~v~~~L~~a~~~~~~~L~~~cl~~i~~~ 199 (506)
.+..+++..++..|..+++..|+..|++|+..+
T Consensus 271 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 271 NLSVENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 446789999999999999999999999999875
No 95
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.89 E-value=1.1e-23 Score=176.91 Aligned_cols=109 Identities=24% Similarity=0.375 Sum_probs=100.6
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
.+|++.+++.++.+|+++.+|||+|+++|++|+|||.|||++|+||++||.++ ..
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-------------------------~~ 62 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-------------------------KD 62 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-------------------------CS
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-------------------------CC
Confidence 68999999999999999999999999999999999999999999999999862 25
Q ss_pred eEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQL 161 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l 161 (506)
+|.++++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+
T Consensus 63 ~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~-----------------------~~~ll~~A~~l~i~~L~~~C~~~l 116 (119)
T 2q81_A 63 VVHLDISNAAGLGQVLEFMYTAKLSLSPEN-----------------------VDDVLAVATFLQMQDIITACHALK 116 (119)
T ss_dssp GGGGGGCCHHHHHHHHHHHHHSCCCCCTTT-----------------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHcCCCCccCHHH-----------------------HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 688899999999999999999999887554 678999999999999999998876
No 96
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.89 E-value=2.6e-24 Score=182.12 Aligned_cols=112 Identities=24% Similarity=0.283 Sum_probs=100.7
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.++.+|+++.+|||+|+|+|++|+|||+|||++|+||++||.+++.|+ .
T Consensus 10 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~----------------------~ 67 (124)
T 2ihc_A 10 SVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE----------------------L 67 (124)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C----------------------E
T ss_pred cchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC----------------------c
Confidence 679999999999999999999999999999999999999999999999999988664 5
Q ss_pred eEEc-CCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 010590 85 VIPV-NSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQL 161 (506)
Q Consensus 85 ~i~l-~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l 161 (506)
.|.+ +++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+
T Consensus 68 ~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~~-----------------------v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 68 NITLPEEVTVKGFEPLIQFAYTAKLILSKEN-----------------------VDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHSEEEEETTT-----------------------HHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred eEeecCCcCHHHHHHHHHHhcCCCcccCHHH-----------------------HHHHHHHHHHHCCHHHHHHHHHHH
Confidence 7888 49999999999999999999887654 678999999999999999988754
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=5.9e-23 Score=173.40 Aligned_cols=108 Identities=31% Similarity=0.362 Sum_probs=98.8
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.+..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|++.|+ +++.+| ..|+||||+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d-~~g~tpL~~ 79 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA-DINAPD-KHHITPLLS 79 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC-CTTCCC-TTSCCHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCcCC-CCCCCHHHH
Confidence 3567899999999999999999999 566654 58999999999999999999999999 999999 899999999
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT 362 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~ 362 (506)
|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 80 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999999999964
No 98
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=8.4e-23 Score=179.72 Aligned_cols=121 Identities=22% Similarity=0.292 Sum_probs=112.6
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...+..|.||||+ +..|+.+++++|+ +.|+++ +|.||||+|+..|+.+++++|+++|+ +++.+| ..|+|||
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L 105 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGA-DVNVPD-GTGALPI 105 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CSCCCC-TTSCCHH
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCCcC-CCCCcHH
Confidence 3457889999999 9999999999999 667655 48999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHh
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQS 393 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ 393 (506)
|+|+..|+.+++++|+++ ++++.+|..|+||||+|+. .++.+++++|+++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~------------------~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 106 HLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQ------------------RGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHH------------------SCCHHHHHHHHTT
T ss_pred HHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHH------------------cCcHHHHHHHHhh
Confidence 999999999999999999 9999999999999999998 7889999998874
No 99
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=7.9e-24 Score=182.32 Aligned_cols=109 Identities=26% Similarity=0.245 Sum_probs=103.3
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLH 325 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh 325 (506)
..|..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.+| ..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~-~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA-LVNTTG-YQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-GGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-cccCcC-CCCCCHHH
Confidence 56889999999999999999999999 667654 58999999999999999999999999 999998 89999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 010590 326 IAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT 362 (506)
Q Consensus 326 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~ 362 (506)
+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 9999999999999999999999999999999999985
No 100
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.89 E-value=4e-24 Score=181.35 Aligned_cols=110 Identities=25% Similarity=0.266 Sum_probs=101.1
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
.+|++.+++.++.+|+++.+|||+|+|+|++|+|||+|||++|+||++||.+++.|. .
T Consensus 13 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~----------------------~ 70 (125)
T 3ohu_A 13 TVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKND----------------------L 70 (125)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCSS----------------------C
T ss_pred HHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCCC----------------------c
Confidence 679999999999999999999999999999999999999999999999999987653 6
Q ss_pred eEEcCC-CCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 010590 85 VIPVNS-VGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQK 159 (506)
Q Consensus 85 ~i~l~~-i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~ 159 (506)
+|.+++ +++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++
T Consensus 71 ~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~~-----------------------v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 71 VVSLPEEVTARGFGPLLQFAYTAKLLLSREN-----------------------IREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp EEECCTTCCHHHHHHHHHHHTTSEEEECTTT-----------------------HHHHHHHHHHHTBSSCTTSSCC
T ss_pred EEEeCCCCCHHHHHHHHHhHcCCceEECHHH-----------------------HHHHHHHHHHhCCHHHHHHHHH
Confidence 799998 999999999999999999987654 6789999999999998887754
No 101
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.89 E-value=3.3e-23 Score=171.24 Aligned_cols=102 Identities=31% Similarity=0.449 Sum_probs=89.0
Q ss_pred HhcCCCceeEEEEECC----eEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCH
Q 010590 18 LINGQAFSDVTFSVEG----RLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGY 93 (506)
Q Consensus 18 l~~~~~~~Dv~~~v~~----~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~ 93 (506)
|++++.+|||+|++++ +.|+|||.|||++|+||++||.++|.|+ . .+|.++++++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~--------------------~-~~i~l~~~~~ 60 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV--------------------K-SEIHIPDVEP 60 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC--------------------------C-CEEEETTSCH
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC--------------------C-CeEEeCCCCH
Confidence 6889999999999988 8999999999999999999999999886 3 7899999999
Q ss_pred HHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 010590 94 EVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLAN 163 (506)
Q Consensus 94 ~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~ 163 (506)
++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+.+
T Consensus 61 ~~f~~~l~~iYt~~~~~~~~~-----------------------~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 61 AAFLILLKYMYSDEIDLEADT-----------------------VLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp HHHHHHHHHHHHCCCCCCTTT-----------------------HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCHHH-----------------------HHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 999999999999999887544 67899999999999999999998864
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.3e-23 Score=196.41 Aligned_cols=134 Identities=16% Similarity=0.213 Sum_probs=108.9
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCChHH
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLEL-GAADVNYPAGPAGKTPL 324 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~v~~~~~~~g~tpL 324 (506)
..+..|.||||+||..|+.+++++|+ +.|+++ +|+||||+||..|+.++|++|++. |+ ++|.+| ..|+|||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~-~~~~~d-~~g~tpL 144 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNI-ELNQQN-KLGDTAL 144 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC-CCCCCC-TTSCCHH
T ss_pred ccccccccccccccccCcHHHHHHHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC-CccccC-CCCCCHH
Confidence 34678899999999999999999999 566654 589999999999999999999999 89 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+. .+..++++.|++.|++.+.++.++
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------------------~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN------------------AACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCS------------------HHHHHHHC----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcc------------------hhHHHHHHHHhccchhhhccchhh
Confidence 99999999999999999999999999999999999986 578889999999999999887766
Q ss_pred C
Q 010590 405 L 405 (506)
Q Consensus 405 ~ 405 (506)
.
T Consensus 207 ~ 207 (222)
T 3ehr_A 207 Y 207 (222)
T ss_dssp -
T ss_pred h
Confidence 5
No 103
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.4e-23 Score=190.93 Aligned_cols=127 Identities=13% Similarity=0.120 Sum_probs=113.9
Q ss_pred ccccHHHHHHHhcCCH----HHHHHHHhcCCCCC-----CChHHHHHHHHcCC------HHHHHHHHHcCCCCCCCCCCC
Q 010590 254 DQKIRRMRRALDSSDV----ELVKLMVMGEGLNL-----DEALALHYAVENCS------REVVKALLELGAADVNYPAGP 318 (506)
Q Consensus 254 ~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~------~~~v~~Ll~~g~~~v~~~~~~ 318 (506)
..|.||||+|+..|+. +++++|| +.|+|+ +|+||||+|+..|+ .++|++||++|+ ++|.+| .
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Ga-din~~d-~ 112 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA-DITALY-K 112 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHH-HTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTC-CSSSCB-G
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCC-CCCccC-C
Confidence 6799999999999986 5999999 778766 48999999999987 688999999999 999999 8
Q ss_pred CCC-hHHHHHHHhC-----CHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHH
Q 010590 319 AGK-TPLHIAAEMV-----SPDMVAVLLD-HHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELV 391 (506)
Q Consensus 319 ~g~-tpLh~A~~~~-----~~~~v~~Ll~-~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll 391 (506)
.|+ ||||+|+..+ +.+++++|++ +|+|++.+|..|+||||+|+. .++.+++++|.
T Consensus 113 ~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~------------------~~~~~~v~~L~ 174 (186)
T 3t8k_A 113 PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR------------------CQKPIALKMME 174 (186)
T ss_dssp GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT------------------TTCHHHHHHHH
T ss_pred CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH------------------cCCHHHHHHHH
Confidence 999 9999999844 4579999999 999999999999999999997 68889999999
Q ss_pred HhccCccccc
Q 010590 392 QSAALVLSRE 401 (506)
Q Consensus 392 ~~ga~~~~~~ 401 (506)
+...+.+.++
T Consensus 175 ~~~~~~~~~~ 184 (186)
T 3t8k_A 175 DYIKKYNLKE 184 (186)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHhccc
Confidence 9887777664
No 104
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=2e-22 Score=173.37 Aligned_cols=98 Identities=31% Similarity=0.314 Sum_probs=92.0
Q ss_pred CCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 010590 283 LDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT 362 (506)
Q Consensus 283 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~ 362 (506)
..|.||||+|+..|+.+++++|++.|+ +++.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGA-DVNAKD-EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCC-CCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 357899999999999999999999999 999998 899999999999999999999999999999999999999999998
Q ss_pred HHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 363 LTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 363 ~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
.++.+++++|+++|++++.+
T Consensus 90 ------------------~~~~~~v~~Ll~~g~~~~~~ 109 (136)
T 2jab_A 90 ------------------IGHLEIAEVLLKHGADVNAQ 109 (136)
T ss_dssp ------------------HTCHHHHHHHHHTTCCTTCC
T ss_pred ------------------cCCHHHHHHHHHcCCCCcCc
Confidence 68899999999988776644
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1.1e-24 Score=207.08 Aligned_cols=107 Identities=26% Similarity=0.336 Sum_probs=75.3
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHH
Q 010590 253 EDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIA 327 (506)
Q Consensus 253 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A 327 (506)
+..|.||||+|+..|+.++++.|++ ++++ +|+||||+|+..|+.++|++|+++|+ ++|.+++..|+||||+|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA-DLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-CTTCCCSSSCCCHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCcCCCCCCCCHHHHH
Confidence 3566777777777777777777773 4433 36777777777777777777777777 77766645677777777
Q ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 010590 328 AEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRT 362 (506)
Q Consensus 328 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~ 362 (506)
+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 119 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 119 AGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 77777777777777777777777777777777764
No 106
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=6.5e-23 Score=176.42 Aligned_cols=98 Identities=24% Similarity=0.229 Sum_probs=91.9
Q ss_pred CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHH
Q 010590 282 NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVD-GVTPLDIL 360 (506)
Q Consensus 282 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~-g~tpLh~A 360 (506)
+..|.||||+|+..|+.+++++|+++|+ +++.++ ..|+||||+|+. |+.+++++|+++|++++.+|.. |+||||+|
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 85 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEAGA-DPNALN-RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDA 85 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcCC-CcCCcC-CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHH
Confidence 4468999999999999999999999999 999998 899999999999 9999999999999999999999 99999999
Q ss_pred HHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 361 RTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 361 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
+. .++.+++++|++.|++++.+
T Consensus 86 ~~------------------~~~~~~v~~Ll~~ga~~~~~ 107 (136)
T 1d9s_A 86 AR------------------EGFLDTLVVLHRAGARLDVC 107 (136)
T ss_dssp HH------------------HTCHHHHHHHHHTCCCCCCC
T ss_pred HH------------------cCCHHHHHHHHHcCCCCCcc
Confidence 98 68899999999988876654
No 107
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=1.2e-23 Score=185.58 Aligned_cols=143 Identities=22% Similarity=0.133 Sum_probs=108.4
Q ss_pred CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCc-HHHHH
Q 010590 282 NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVT-PLDIL 360 (506)
Q Consensus 282 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t-pLh~A 360 (506)
+..|.||||+|+..|+.++|++|+++|+ +++.++ ..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGA-NPNAPN-SYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTC-CTTCCC-SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCC-CCCCCC-CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 3468999999999999999999999999 999998 89999999996 99999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcccc
Q 010590 361 RTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATIN 440 (506)
Q Consensus 361 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~ 440 (506)
+. .++.+++++|+++|++++.+ +..|.||||+|+... ...
T Consensus 86 ~~------------------~~~~~~v~~Ll~~ga~~~~~-----------d~~g~tpl~~A~~~~-----------~~~ 125 (156)
T 1bi7_B 86 AR------------------EGFLDTLVVLHRAGARLDVR-----------DAWGRLPVDLAEELG-----------HRD 125 (156)
T ss_dssp HH------------------HTCHHHHHHHHHHTCCSSCC-----------CTTCCCHHHHHHHHT-----------CHH
T ss_pred HH------------------CCCHHHHHHHHHcCCCCccc-----------CCCCCCHHHHHHHhC-----------HHH
Confidence 98 68899999999999999988 456779999984322 223
Q ss_pred ccccccCCCcceeeccCCCCCCCcchhhh
Q 010590 441 NNSLNLDSSRLVYLNLGAGTGNSAHHHHH 469 (506)
Q Consensus 441 ~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa 469 (506)
++++++ ..+.++|.+|..|+||.+-+.
T Consensus 126 ~v~~Ll--~~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 126 VARYLR--AAAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp HHHHHS--SCC------------------
T ss_pred HHHHHH--HcCCCCCccCcCcCcccccCC
Confidence 445555 456899999999999988543
No 108
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=4.3e-22 Score=195.19 Aligned_cols=133 Identities=28% Similarity=0.311 Sum_probs=117.8
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----------CChHHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCC
Q 010590 254 DQKIRRMRRALDSSDVELVKLMVMGEGLNL-----------DEALALHYAVEN---CSREVVKALLELGAADVNYPAGPA 319 (506)
Q Consensus 254 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----------~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~v~~~~~~~ 319 (506)
..+.++|+.|+..|+.+.++.|+ ..|+|+ .|+||||+|+.. |+.++|++||+.|+ ++|.+| ..
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga-dvn~~d-~~ 225 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-HLDAKA-AD 225 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS-CTTCCC-TT
T ss_pred CchHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC-CCCCCC-CC
Confidence 34578999999999999999999 555443 578999999997 89999999999999 999999 89
Q ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccc
Q 010590 320 GKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLS 399 (506)
Q Consensus 320 g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~ 399 (506)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++.|++
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~------------------~~~~~iv~~Ll~~ga~--- 284 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK------------------KHHKECEELLEQAQAG--- 284 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHH------------------HTCHHHHHHHHHHHHH---
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------------------cCCHHHHHHHHHhcCC---
Confidence 9999999999999999999999999999999999999999998 6888999999999986
Q ss_pred cccCCCCCCCCCCccccCCCCCCcc
Q 010590 400 REEGILNEPSSSTATVIYPPPMSCC 424 (506)
Q Consensus 400 ~~~~~~~~~~~~~~~~~tplh~a~~ 424 (506)
.|.||||+|+.
T Consensus 285 --------------~g~tpLh~A~~ 295 (301)
T 2b0o_E 285 --------------TFAFPLHVDYS 295 (301)
T ss_dssp --------------TTSSCCC----
T ss_pred --------------CCCChhHHHHh
Confidence 36799999853
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.3e-22 Score=183.93 Aligned_cols=109 Identities=26% Similarity=0.344 Sum_probs=101.7
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHH
Q 010590 252 LEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHI 326 (506)
Q Consensus 252 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~ 326 (506)
.+..|.||||+|+..|+.++++.|++ ++++ +|+||||+|+..|+.+++++|+++|+ ++|.+++..|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA-DLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCSSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCCHHHH
Confidence 46789999999999999999999994 5544 58999999999999999999999999 9999876789999999
Q ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Q 010590 327 AAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTL 363 (506)
Q Consensus 327 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~ 363 (506)
|+..|+.+++++|+++|++++.+|.+|+||||+|+..
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 9999999999999999999999999999999999964
No 110
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.87 E-value=4.6e-23 Score=175.69 Aligned_cols=112 Identities=23% Similarity=0.365 Sum_probs=97.6
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.++.+|+++.+|||+|+|+|++|+|||+|||++|+||++||.++ . ..
T Consensus 14 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~--~----------------------~~ 69 (129)
T 3ga1_A 14 PNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS--R----------------------SA 69 (129)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC--C----------------------CS
T ss_pred CcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC--C----------------------CC
Confidence 68899999999999999999999999999999999999999999999999875 1 36
Q ss_pred eEEcC-CCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 010590 85 VIPVN-SVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLAN 163 (506)
Q Consensus 85 ~i~l~-~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~ 163 (506)
+|.|+ ++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+.+
T Consensus 70 ~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~~-----------------------~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 70 VVELPAAVQPQSFQQILSFCYTGRLSMNVGD-----------------------QDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHSEEECCTTT-----------------------HHHHHHHHHHTTBTTSSCC-------
T ss_pred EEEECCCCCHHHHHHHHHHHhCCccccCHHH-----------------------HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 89996 9999999999999999999987654 67899999999999999999998764
No 111
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=5.1e-22 Score=192.28 Aligned_cols=155 Identities=22% Similarity=0.179 Sum_probs=129.5
Q ss_pred HhhcccchhHHHhhccccccccccccccc-ccccCCccccHHHHHHH-----hcCCHHHHHHHHhcCCC-----CCCChH
Q 010590 219 EDLRHKSSLARRSLISHHHHHHHHDLSAA-AAADLEDQKIRRMRRAL-----DSSDVELVKLMVMGEGL-----NLDEAL 287 (506)
Q Consensus 219 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~~~~-----d~~g~t 287 (506)
.+..+.|||.................... .....+..|.||||+|+ ..++.+++++|+ +.|. +..|+|
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t 185 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLF-RLGNINAKASQAGQT 185 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHH-HHSCTTCCCTTTCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHH-HcCCCccccCCCCCC
Confidence 44567788877665444333322222222 45567889999999999 678999999999 4443 335999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHHHHH
Q 010590 288 ALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLD-HHADPNVRTVDGVTPLDILRTLTSD 366 (506)
Q Consensus 288 ~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpLh~A~~~~~~ 366 (506)
|||+|+..|+.++|++|+++|+ ++|.+| ..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+.
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~ga-d~n~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~---- 259 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEA-DVNVQD-DDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD---- 259 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH----
T ss_pred HHHHHHHcCCHHHHHHHHhCCC-CCCCCC-CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH----
Confidence 9999999999999999999999 999999 899999999999999999999999 899999999999999999998
Q ss_pred HHHcCCCCCCcccCCChHHHHHHHHHhc
Q 010590 367 FLFKGAVPGLTHIEPNKLRLCLELVQSA 394 (506)
Q Consensus 367 ~l~~~~~~~~~~~~~~~~~~~~~Ll~~g 394 (506)
.++.+++++|++++
T Consensus 260 --------------~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 260 --------------AGQSEIASMLYSRM 273 (276)
T ss_dssp --------------HTCHHHHHHHHHHC
T ss_pred --------------cCCHHHHHHHHhcc
Confidence 68899999999875
No 112
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=1.2e-22 Score=193.00 Aligned_cols=139 Identities=19% Similarity=0.174 Sum_probs=110.7
Q ss_pred hcccchhHHHhhcccccccccccccccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC------CChHHHHHHHH
Q 010590 221 LRHKSSLARRSLISHHHHHHHHDLSAAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL------DEALALHYAVE 294 (506)
Q Consensus 221 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~------~g~t~Lh~A~~ 294 (506)
..+.|||................. .......|..|.||||+|+..|+.++|++|+ +.|+++ +|+||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHH
Confidence 356788887765544433322222 3344567888999999999999999999999 667655 48899999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCC
Q 010590 295 NCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVP 374 (506)
Q Consensus 295 ~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~ 374 (506)
.|+.++|++|+++|+ +++.+| ..|+||||+|+..+. ...+.||||+|+.
T Consensus 121 ~g~~~~v~~Ll~~ga-~~~~~d-~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~------------ 169 (244)
T 3ui2_A 121 YVRPEVVEALVELGA-DIEVED-ERGLTALELAREILK-----------------TTPKGNPMQFGRR------------ 169 (244)
T ss_dssp TTCHHHHHHHHHTTC-CTTCCC-TTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHH------------
T ss_pred cCCHHHHHHHHHCCC-CCCCCC-CCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHH------------
Confidence 999999999999999 999998 899999999986332 2568899999998
Q ss_pred CCcccCCChHHHHHHHHHhccCcc
Q 010590 375 GLTHIEPNKLRLCLELVQSAALVL 398 (506)
Q Consensus 375 ~~~~~~~~~~~~~~~Ll~~ga~~~ 398 (506)
.++.+++.+|++.+.+..
T Consensus 170 ------~g~~~iv~~L~~~~~~~~ 187 (244)
T 3ui2_A 170 ------IGLEKVINVLEGQVFEYA 187 (244)
T ss_dssp ------HHHHHHHHHHHHHHEEEE
T ss_pred ------cChHHHHHHHHHhccccc
Confidence 578889999999876543
No 113
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=7.1e-22 Score=158.05 Aligned_cols=93 Identities=39% Similarity=0.517 Sum_probs=87.2
Q ss_pred CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Q 010590 284 DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTL 363 (506)
Q Consensus 284 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~ 363 (506)
+|+||||+|+..|+.+++++|++.|+ ++|.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~n~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~- 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR- 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH-
Confidence 58899999999999999999999999 999998 899999999999999999999999999999999999999999998
Q ss_pred HHHHHHcCCCCCCcccCCChHHHHHHHHHhccC
Q 010590 364 TSDFLFKGAVPGLTHIEPNKLRLCLELVQSAAL 396 (506)
Q Consensus 364 ~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~ 396 (506)
.++.+++++|+++||+
T Consensus 78 -----------------~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 -----------------NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -----------------TTCHHHHHHHHHTTCC
T ss_pred -----------------cCCHHHHHHHHHcCCC
Confidence 7899999999999985
No 114
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=5.2e-22 Score=170.84 Aligned_cols=111 Identities=25% Similarity=0.199 Sum_probs=104.7
Q ss_pred CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 010590 282 NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILR 361 (506)
Q Consensus 282 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~ 361 (506)
|.+|+||||+|+..|+.+++++|++.|+ +++.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGS-DPNVKD-HAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 5579999999999999999999999999 999998 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 362 TLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 362 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
. .++.+++++|++.|++++.+ +..|.||||+|+
T Consensus 85 ~------------------~~~~~~v~~Ll~~ga~~~~~-----------~~~g~tpl~~A~ 117 (137)
T 3c5r_A 85 K------------------NGHVDIVKLLLSYGASRNAV-----------NIFGLRPVDYTD 117 (137)
T ss_dssp H------------------TTCHHHHHHHHHTTCCTTCC-----------CTTSCCGGGGCC
T ss_pred H------------------cCCHHHHHHHHHcCCCCCCC-----------CCCCCCHHHHHh
Confidence 8 78999999999999999988 556779999984
No 115
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=5.8e-22 Score=167.25 Aligned_cols=110 Identities=22% Similarity=0.197 Sum_probs=101.5
Q ss_pred CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 010590 282 NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILR 361 (506)
Q Consensus 282 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~ 361 (506)
+..|.||||+|+..|+.+++++|++.|+ +++.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGE-DVNRTL-EGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCC-TTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCC-CcCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3468899999999999999999999999 999998 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCC
Q 010590 362 TLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMS 422 (506)
Q Consensus 362 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a 422 (506)
. .++.+++++|+++|++++.+ +..|.||||+|
T Consensus 82 ~------------------~~~~~~v~~Ll~~ga~~~~~-----------~~~g~t~l~~A 113 (123)
T 3aaa_C 82 Y------------------EGHVSCVKLLLSKGADKTVK-----------GPDGLTAFEAT 113 (123)
T ss_dssp H------------------HTCHHHHHHHHHTTCCTTCC-----------CTTSCCHHHHC
T ss_pred H------------------cCCHHHHHHHHHcCCCCCCc-----------CCCCCCHHHHh
Confidence 8 68899999999999999988 45667899887
No 116
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.86 E-value=1.9e-22 Score=168.23 Aligned_cols=103 Identities=28% Similarity=0.434 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
++|++.+++.++.+|+++.+|||+|+|+|++|+|||+|||++|+||++||.++ ..
T Consensus 12 ~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-------------------------~~ 66 (116)
T 3fkc_A 12 IQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-------------------------GQ 66 (116)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-------------------------CS
T ss_pred ccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-------------------------CC
Confidence 78999999999999999999999999999999999999999999999999874 25
Q ss_pred eEEcCCCCHHHHHHHhhhhhccce-eccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQV-SIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLAL 155 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~-~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~ 155 (506)
+|.++++++++|+.+|+|+|||++ .++. +.+.+++.+|++|+++.++.
T Consensus 67 ~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~-----------------------~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 67 VVELSFIRAEIFAEILNYIYSSKIVRVRS-----------------------DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp EEEECSSCHHHHHHHHHHHTTSCCCSCCH-----------------------HHHHHHHHHHHHHTCHHHHT
T ss_pred EEEeCCCCHHHHHHHHHhhcCCCcCCCCH-----------------------HHHHHHHHHHHHhCccccCc
Confidence 799999999999999999999998 4542 34788999999999998864
No 117
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.2e-21 Score=163.64 Aligned_cols=97 Identities=38% Similarity=0.496 Sum_probs=91.7
Q ss_pred CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Q 010590 284 DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTL 363 (506)
Q Consensus 284 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~ 363 (506)
+|+||||+|+..|+.+++++|++.|+ +++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~- 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR- 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC-CCCCcC-CCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHH-
Confidence 58999999999999999999999999 999998 899999999999999999999999999999999999999999998
Q ss_pred HHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 364 TSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 364 ~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
.++.+++++|+++|++++.+
T Consensus 78 -----------------~~~~~~~~~Ll~~g~~~~~~ 97 (126)
T 1n0r_A 78 -----------------NGHLEVVKLLLEAGADVNAK 97 (126)
T ss_dssp -----------------TTCHHHHHHHHHTTCCTTCC
T ss_pred -----------------cChHHHHHHHHHcCCCCccc
Confidence 78999999999988776544
No 118
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=5.7e-22 Score=185.28 Aligned_cols=108 Identities=20% Similarity=0.107 Sum_probs=99.8
Q ss_pred CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHH
Q 010590 284 DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDH-HADPNVRTVDGVTPLDILRT 362 (506)
Q Consensus 284 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpLh~A~~ 362 (506)
+|.||||+|+..|+.++|++|++.|+ +++.+| ..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+.
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRV-GVNGLD-KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccCcHHHHHHHHhCCC-CccccC-CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 57899999999999999999999999 999999 8999999999999999999999999 99999999999999999998
Q ss_pred HHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCC
Q 010590 363 LTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMS 422 (506)
Q Consensus 363 ~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a 422 (506)
.++.+++++|+++|++++.+ +..|.||||+|
T Consensus 150 ------------------~~~~~~v~~Ll~~ga~~~~~-----------~~~g~t~l~~A 180 (222)
T 3ehr_A 150 ------------------KGYADIVQLLLAKGARTDLR-----------NIEKKLAFDMA 180 (222)
T ss_dssp ------------------HTCHHHHHHHHHHTCCSCCC-----------CTTSCCHHHHC
T ss_pred ------------------cCCHHHHHHHHHcCCCCccc-----------cCCCCCHHHHh
Confidence 68899999999999998877 34455677766
No 119
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=3.5e-22 Score=181.02 Aligned_cols=128 Identities=19% Similarity=0.185 Sum_probs=114.9
Q ss_pred CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHH
Q 010590 284 DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRT-VDGVTPLDILRT 362 (506)
Q Consensus 284 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpLh~A~~ 362 (506)
+|.||||+|+..|+.++++.|++ |+ ++|.+| ..|+||||+|+..|+.+++++|+++|++++.+| ..|+||||+|+.
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DR-DVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TS-CTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cC-CCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 58999999999999999999999 99 999999 899999999999999999999999999999998 899999999998
Q ss_pred HHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcccccc
Q 010590 363 LTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNN 442 (506)
Q Consensus 363 ~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~ 442 (506)
.++.+++++|+++|++++.+ +..|.||||+|+.
T Consensus 120 ------------------~~~~~~v~~Ll~~ga~~~~~-----------d~~g~tpl~~A~~------------------ 152 (183)
T 3deo_A 120 ------------------YVRPEVVEALVELGADIEVE-----------DERGLTALELARE------------------ 152 (183)
T ss_dssp ------------------TTCHHHHHHHHHHTCCTTCC-----------CTTSCCHHHHHHH------------------
T ss_pred ------------------cCcHHHHHHHHHcCCCCcCC-----------CCCCCCHHHHHHH------------------
Confidence 78999999999999999987 5567799999831
Q ss_pred ccccCCCcceeeccCCCCCCCcchhhhhcCC
Q 010590 443 SLNLDSSRLVYLNLGAGTGNSAHHHHHQMGS 473 (506)
Q Consensus 443 ~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs 473 (506)
......+.|||++|+..|.
T Consensus 153 ------------~~~~~~~~~~l~~a~~~~~ 171 (183)
T 3deo_A 153 ------------ILKTTPKGNPMQFGRRIGL 171 (183)
T ss_dssp ------------HHHTCCCCSHHHHHHHHHH
T ss_pred ------------hccCcccccHHHHHHHcCH
Confidence 1112457899999998874
No 120
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=4.3e-21 Score=201.43 Aligned_cols=127 Identities=28% Similarity=0.293 Sum_probs=111.6
Q ss_pred cHHHHHHHhcCCHHHHHHHHhcCCCCC-----------CChHHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCCCh
Q 010590 257 IRRMRRALDSSDVELVKLMVMGEGLNL-----------DEALALHYAVE---NCSREVVKALLELGAADVNYPAGPAGKT 322 (506)
Q Consensus 257 ~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----------~g~t~Lh~A~~---~g~~~~v~~Ll~~g~~~v~~~~~~~g~t 322 (506)
.+.||.|+..|+.++|+.|| +.|+|+ .|+||||+||. .|+.++|++||++|+ ++|.+| ..|+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll-~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga-~vn~~d-~~g~T 209 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-HLDAKA-ADGNT 209 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHH-HTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC-CTTCCC-SSSCC
T ss_pred HHHHHHHHhccCHHHHHHHH-hhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC-CCCccC-CCCCc
Confidence 47899999999999999999 666654 48999999977 899999999999999 999999 89999
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccccc
Q 010590 323 PLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREE 402 (506)
Q Consensus 323 pLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~ 402 (506)
|||+|+..|+.++|++|+++|||++.+|..|+||||+|+. .++.+++++|+++|++++....
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~------------------~~~~~~~~~Ll~~ga~~~~~~~ 271 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK------------------KHHKECEELLEQAQAGTFAFPL 271 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHH------------------TTCHHHHHHHHHTCC-------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------------------cCCHHHHHHHHHhCCCCCCCcc
Confidence 9999999999999999999999999999999999999998 7899999999999999998644
Q ss_pred CC
Q 010590 403 GI 404 (506)
Q Consensus 403 ~~ 404 (506)
..
T Consensus 272 h~ 273 (497)
T 3lvq_E 272 HV 273 (497)
T ss_dssp --
T ss_pred ee
Confidence 33
No 121
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=8.7e-21 Score=183.72 Aligned_cols=121 Identities=23% Similarity=0.298 Sum_probs=113.0
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCCCC-----------CChHHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCC
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGLNL-----------DEALALHYAVEN---CSREVVKALLELGAADVNYPAGPAG 320 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----------~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~v~~~~~~~g 320 (506)
...++|+.|+..|+.+.++.++ ..|.++ .|+||||+|+.. |+.+++++|+++|+ ++|.+| ..|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll-~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga-~in~~d-~~g 205 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAY-ADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG-NLDKQT-GKG 205 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH-HTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS-CTTCCC-TTC
T ss_pred hhhhhhhhHhhhcccHHHHHHH-HhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC-CccccC-CCC
Confidence 4578999999999999999999 556542 489999999999 89999999999999 999999 899
Q ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccC
Q 010590 321 KTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAAL 396 (506)
Q Consensus 321 ~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~ 396 (506)
+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+. .++.+++++|+++|++
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~------------------~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKR------------------LKHEHCEELLTQALSG 263 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHH------------------cCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999998 7899999999999984
No 122
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=1.8e-23 Score=210.74 Aligned_cols=165 Identities=12% Similarity=-0.017 Sum_probs=127.2
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHhcCCC------C--CCChHHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCCh
Q 010590 254 DQKIRRMRRALDSSDVELVKLMVMGEGL------N--LDEALALHYAVENCSREVVKALLELGAAD---VNYPAGPAGKT 322 (506)
Q Consensus 254 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------d--~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~---v~~~~~~~g~t 322 (506)
..+.||||+|+..|+.++|++|+ +.|. + ..|.||||+|+..|+.++|++|+++|+ + ++..+ .. +|
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll-~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~ga-d~~~~~i~~-~~-~T 165 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLC-LLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP-TEIMAMIQA-EN-YH 165 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHT-TC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCT-TTHHHHHSH-HH-HH
T ss_pred CCcCCHHHHHHHcCCHHHHHHHH-HcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCC-CccccccCC-CC-CC
Confidence 34569999999999999999999 5554 2 348899999999999999999999998 6 34433 33 99
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-HHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccc
Q 010590 323 PLHIAAEMVSPDMVAVLLDHHADPNV--RTVDGVTPLDILR-TLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLS 399 (506)
Q Consensus 323 pLh~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpLh~A~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~ 399 (506)
|||+|+..|+.++|++|+++|++++. .|..|+||||+|+ . .++.+++++|++.|++
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~------------------~G~~eiv~~Ll~~ga~--- 224 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG------------------RGHHNVINFLLDCPVM--- 224 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHST------------------TCCHHHHHHHTTSHHH---
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHH------------------CCCHHHHHHHHhCCCc---
Confidence 99999999999999999999999987 8999999999999 7 7888888888887642
Q ss_pred cccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCccccccccccCCCcceeeccCCCCCCCcchhhhhcCCCC
Q 010590 400 REEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSSR 475 (506)
Q Consensus 400 ~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~~ 475 (506)
|.||||.|+.. +...++.++. ..+.+++..| ++++.|+..|...
T Consensus 225 ---------------~~taL~~Aa~~-----------g~~evv~lL~--~~ga~~~~~~----~~l~~A~~~g~~~ 268 (376)
T 2aja_A 225 ---------------LAYAEIHEFEY-----------GEKYVNPFIA--RHVNRLKEMH----DAFKLSNPDGVFD 268 (376)
T ss_dssp ---------------HHHHHHCTTTT-----------TTTTHHHHHH--HHHHHHHHHH----TTTTTTSSSSCCC
T ss_pred ---------------cchHHHHHHHC-----------CCHHHHHHHH--hcCccccccc----HHHHHHHHCCChh
Confidence 66888887322 2222333433 2334555544 4788888877543
No 123
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.84 E-value=1.6e-21 Score=163.10 Aligned_cols=104 Identities=20% Similarity=0.178 Sum_probs=91.7
Q ss_pred hhhHHHHHHHHHHHhcCCCceeEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 010590 5 ESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTG 84 (506)
Q Consensus 5 ~~~~~~~~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 84 (506)
..++..+++.++ |.++.+|||+|+|+|++|+|||+|||++|+||++ ...
T Consensus 13 ~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-----------------------------~~~ 61 (119)
T 3m5b_A 13 PYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR-----------------------------RGQ 61 (119)
T ss_dssp TTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC-----------------------------CEE
T ss_pred CcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc-----------------------------CCC
Confidence 456677888886 6789999999999999999999999999999984 135
Q ss_pred eEEcCCCCHHHHHHHhhhhhccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 010590 85 VIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLA 162 (506)
Q Consensus 85 ~i~l~~i~~~~~~~ll~f~Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~ 162 (506)
.|.|+++++++|+.+|+|+|||++.++.+. +.+++.+|++|+++.++..|++.+.
T Consensus 62 ~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~-----------------------v~~ll~aA~~l~i~~l~~~C~~~~~ 116 (119)
T 3m5b_A 62 WALGEGISPSTFAQLLNFVYGESVELQPGE-----------------------LRPLQEAARALGVQSLEEACWRARG 116 (119)
T ss_dssp EECCSSCCHHHHHHHHHHHTTCCEEECGGG-----------------------HHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred EEEeCCCCHHHHHHHHHHHcCCCcCcCHHH-----------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 799999999999999999999999987544 6789999999999999999998765
No 124
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=2.2e-20 Score=187.50 Aligned_cols=141 Identities=21% Similarity=0.187 Sum_probs=113.3
Q ss_pred CccccHHHHHHHhc-CCHHHHHHHHhcCCCCC-------CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 253 EDQKIRRMRRALDS-SDVELVKLMVMGEGLNL-------DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 253 ~~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~d~-------~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
+..+.|+||+|+.. |+.++++.|| +.|+|+ +|.||||+|+..|+.++|++||++|+ ++|.+| ..|+|||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL-~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga-dvn~~d-~~G~TpL 272 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADAL-AHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA-NVNQAD-SAGRGPL 272 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHH-HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHH-HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCCC-CCCCCHH
Confidence 34568999999999 9999999999 666654 47899999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCC
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGI 404 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~ 404 (506)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++.+|++.+..-...
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~------------------~g~~~iv~lLl~~~~~~~~~---- 330 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAME------------------TANADIVTLLRLAKMREAEA---- 330 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------------------TTCHHHHHHHHHHHC---------
T ss_pred HHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHH------------------CCCHHHHHHHHHcCCCcccc----
Confidence 99999999999999999999999999999999999998 78999999999988432211
Q ss_pred CCCCCCCCccccCCCCCC
Q 010590 405 LNEPSSSTATVIYPPPMS 422 (506)
Q Consensus 405 ~~~~~~~~~~~~tplh~a 422 (506)
...+..+.|++++.
T Consensus 331 ----~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 331 ----AQGQAGDETYLDIF 344 (368)
T ss_dssp ------------------
T ss_pred ----cccCCCCCCHHHHH
Confidence 12245677888775
No 125
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=9.1e-22 Score=192.82 Aligned_cols=140 Identities=19% Similarity=0.105 Sum_probs=112.0
Q ss_pred ChHHHHHHHHcCCHHHHHHHHHcCCCCCCC------CCCCCCChHHHHHHHh---CCHHHHHHHHHCCCCCCCCCCCCCc
Q 010590 285 EALALHYAVENCSREVVKALLELGAADVNY------PAGPAGKTPLHIAAEM---VSPDMVAVLLDHHADPNVRTVDGVT 355 (506)
Q Consensus 285 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~------~~~~~g~tpLh~A~~~---~~~~~v~~Ll~~ga~~~~~d~~g~t 355 (506)
+.++||.|+..|+.+.|+.|++.|+ +++. .+ ..|+||||+|+.. |+.+++++|+++|+++|.+|..|+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~-d~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQ-APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCEECSSSC-SCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCC-cccccCCCcccC-CCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 5688999999999999999999999 9998 56 8999999999997 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCC
Q 010590 356 PLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSG 435 (506)
Q Consensus 356 pLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~ 435 (506)
|||+|+. .++.+++++|+++|++++.+ +..|.||||+|+...
T Consensus 229 pLh~A~~------------------~g~~~~v~~Ll~~gad~~~~-----------d~~G~TpL~~A~~~~--------- 270 (301)
T 2b0o_E 229 ALHYAAL------------------YNQPDCLKLLLKGRALVGTV-----------NEAGETALDIARKKH--------- 270 (301)
T ss_dssp HHHHHHH------------------TTCHHHHHHHHHTTCCCSCC-----------CTTSCCHHHHHHHHT---------
T ss_pred HHHHHHH------------------cCCHHHHHHHHHcCCCCCCc-----------CCCCCCHHHHHHHcC---------
Confidence 9999998 78999999999999999988 556779999984321
Q ss_pred CccccccccccCCCcceeeccCCCCCCCcchhhhhcCCC
Q 010590 436 SATINNNSLNLDSSRLVYLNLGAGTGNSAHHHHHQMGSS 474 (506)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ln~~D~~G~T~LH~Aa~~gs~ 474 (506)
...++.+++ ......|+||||+|+..|.+
T Consensus 271 --~~~iv~~Ll--------~~ga~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 271 --HKECEELLE--------QAQAGTFAFPLHVDYSWVIS 299 (301)
T ss_dssp --CHHHHHHHH--------HHHHHTTSSCCC--------
T ss_pred --CHHHHHHHH--------HhcCCCCCChhHHHHhcCCc
Confidence 112222322 23334799999999999954
No 126
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=7.2e-21 Score=158.39 Aligned_cols=105 Identities=36% Similarity=0.420 Sum_probs=80.8
Q ss_pred CCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 010590 282 NLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILR 361 (506)
Q Consensus 282 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~ 361 (506)
|.+|+||||+|+..|+.+++++|++.|+ +++.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~d-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGA-DVNARS-KDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTC-CSSCCC-SSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4567778888888888888888888877 777777 77888888888888888888888888888888888888888887
Q ss_pred HHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCC
Q 010590 362 TLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILN 406 (506)
Q Consensus 362 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~ 406 (506)
. .++.+++++|+++|++++.++..|.+
T Consensus 84 ~------------------~~~~~~~~~Ll~~ga~~n~~~~~~~~ 110 (115)
T 2l6b_A 84 K------------------NGHHEIVKLLDAKGADVNARSWGSSH 110 (115)
T ss_dssp T------------------TTCHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred H------------------CCCHHHHHHHHHcCCCCCcCCccccc
Confidence 6 56777788888888888877665553
No 127
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=3.1e-20 Score=148.44 Aligned_cols=88 Identities=38% Similarity=0.491 Sum_probs=81.8
Q ss_pred cccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHH
Q 010590 255 QKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAE 329 (506)
Q Consensus 255 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~ 329 (506)
+|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.+| ..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~d-~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKD-KNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccC-CCCCCHHHHHHH
Confidence 4899999999999999999999 667655 58999999999999999999999999 999999 899999999999
Q ss_pred hCCHHHHHHHHHCCCC
Q 010590 330 MVSPDMVAVLLDHHAD 345 (506)
Q Consensus 330 ~~~~~~v~~Ll~~ga~ 345 (506)
.|+.+++++|+++||+
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999999986
No 128
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=8e-21 Score=158.12 Aligned_cols=105 Identities=30% Similarity=0.336 Sum_probs=95.9
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPL 324 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpL 324 (506)
...|..|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.+| ..|+|||
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~d-~~g~tpl 79 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA-DVNARS-KDGNTPE 79 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC-CTTCCC-TTCCCTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCcccC-CCCCCHH
Confidence 346889999999999999999999999 667654 58999999999999999999999999 999999 8999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 010590 325 HIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPL 357 (506)
Q Consensus 325 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL 357 (506)
|+|+..|+.+++++|+++|+++|.++..|.||-
T Consensus 80 ~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 80 HLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 999999999999999999999999999999984
No 129
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=1.8e-21 Score=196.03 Aligned_cols=124 Identities=12% Similarity=0.053 Sum_probs=110.0
Q ss_pred cCCccccHHHHHHHhcCCHHHHHHHHhcCCCC-----C--CChHHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCC
Q 010590 251 DLEDQKIRRMRRALDSSDVELVKLMVMGEGLN-----L--DEALALHYAVENCSREVVKALLELGAADVNY--PAGPAGK 321 (506)
Q Consensus 251 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d-----~--~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~--~~~~~g~ 321 (506)
..+..|.||||+||..|+.++|++|+ +.|+| + .++||||+|+..|+.++|++|+++|+ +++. .| ..|+
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll-~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga-~~~~~~~d-~~g~ 199 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLC-ELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAP-TEATAMIQ-AENY 199 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHH-HSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCG-GGHHHHHH-HHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHH-hCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCC-ccchhccC-CCCC
Confidence 44667899999999999999999999 67753 2 24899999999999999999999999 9887 77 7899
Q ss_pred hHHHHHH-HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCcccc
Q 010590 322 TPLHIAA-EMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSR 400 (506)
Q Consensus 322 tpLh~A~-~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~ 400 (506)
||||+|+ ..|+.++|++|+++|++ |.||||+|+. .++.+++++|++.|++++.+
T Consensus 200 TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~------------------~g~~evv~lL~~~ga~~~~~ 254 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFE------------------YGEKYVNPFIARHVNRLKEM 254 (376)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTT------------------TTTTTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHH------------------CCCHHHHHHHHhcCcccccc
Confidence 9999999 99999999999998853 8999999987 78889999999999999877
Q ss_pred cc
Q 010590 401 EE 402 (506)
Q Consensus 401 ~~ 402 (506)
+.
T Consensus 255 ~~ 256 (376)
T 2aja_A 255 HD 256 (376)
T ss_dssp HT
T ss_pred cH
Confidence 54
No 130
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=1.8e-18 Score=167.40 Aligned_cols=143 Identities=17% Similarity=0.113 Sum_probs=118.8
Q ss_pred ccCCccccHHHHHHHhcCCHHHHHHHHh---cC---CCCC-----------------------------CChHHHHHHHH
Q 010590 250 ADLEDQKIRRMRRALDSSDVELVKLMVM---GE---GLNL-----------------------------DEALALHYAVE 294 (506)
Q Consensus 250 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~---~~d~-----------------------------~g~t~Lh~A~~ 294 (506)
...|..+.++++++...|+..+.+++.. .. ..+. ...++|+.|+.
T Consensus 60 ~~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~ 139 (278)
T 1dcq_A 60 LTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVK 139 (278)
T ss_dssp TTTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhh
Confidence 4467778888999988888777666541 00 0000 01479999999
Q ss_pred cCCHHHHHHHHHcCCCCCC------CCCCCCCChHHHHHHHh---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHH
Q 010590 295 NCSREVVKALLELGAADVN------YPAGPAGKTPLHIAAEM---VSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTS 365 (506)
Q Consensus 295 ~g~~~~v~~Ll~~g~~~v~------~~~~~~g~tpLh~A~~~---~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A~~~~~ 365 (506)
.|+.+.++.+++.|+ +++ ..+ ..|+||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+.
T Consensus 140 ~~d~~~~~~ll~~g~-~~~~~~~l~~~~-~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~--- 214 (278)
T 1dcq_A 140 TRDIFGLLQAYADGV-DLTEKIPLANGH-EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCL--- 214 (278)
T ss_dssp TTCHHHHHHHHHTTC-CTTSBCCCSSCS-STTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHH---
T ss_pred hcccHHHHHHHHhhc-chhhhccccccc-cCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHH---
Confidence 999999999999999 854 446 7999999999999 89999999999999999999999999999998
Q ss_pred HHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 366 DFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
.++.+++++|+++|++++.+ +..|.||||+|+
T Consensus 215 ---------------~g~~~~v~~Ll~~gad~~~~-----------d~~g~tpL~~A~ 246 (278)
T 1dcq_A 215 ---------------TDNAECLKLLLRGKASIEIA-----------NESGETPLDIAK 246 (278)
T ss_dssp ---------------TTCHHHHHHHHHTTCCTTCC-----------CTTSCCHHHHHH
T ss_pred ---------------cCCHHHHHHHHHcCCCCCCc-----------cCCCCCHHHHHH
Confidence 78999999999999999987 456668888873
No 131
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=1.6e-18 Score=173.94 Aligned_cols=149 Identities=20% Similarity=0.134 Sum_probs=105.7
Q ss_pred CCChHHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCC-CCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 010590 283 LDEALALHYAVEN-CSREVVKALLELGAADVNYPAG-PAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDIL 360 (506)
Q Consensus 283 ~~g~t~Lh~A~~~-g~~~~v~~Ll~~g~~~v~~~~~-~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A 360 (506)
..+.|+||+|+.. |+.++++.||+.|+ ++|..+. ..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Ga-dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGA-DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTC-CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCC-CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3578999999999 99999999999999 9998862 5899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCccCccCCCCCCCCCcccc
Q 010590 361 RTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSCCSEEVHNNSSSGSATIN 440 (506)
Q Consensus 361 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~~~~~~~~~~~~~~~~~~ 440 (506)
+. .++.+++++|+++|++++.+ +..|.||||+|+.... ..
T Consensus 276 ~~------------------~g~~~~v~~LL~~Gad~~~~-----------d~~G~TpL~~A~~~g~-----------~~ 315 (368)
T 3jue_A 276 TI------------------LGHTGLACLFLKRGADLGAR-----------DSEGRDPLTIAMETAN-----------AD 315 (368)
T ss_dssp HH------------------HTCHHHHHHHHHTTCCTTCC-----------CTTSCCHHHHHHHTTC-----------HH
T ss_pred HH------------------cCcHHHHHHHHHCcCCCCCc-----------CCCCCCHHHHHHHCCC-----------HH
Confidence 98 68899999999999999988 5567799999843221 12
Q ss_pred ccccccC-CCcceeeccCCCCCCCcchhhhhcC
Q 010590 441 NNSLNLD-SSRLVYLNLGAGTGNSAHHHHHQMG 472 (506)
Q Consensus 441 ~~~~~~~-~~~~~~ln~~D~~G~T~LH~Aa~~g 472 (506)
++.++.. ..+....+..+..|.|+|+++....
T Consensus 316 iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 316 IVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHHHHHC-----------------------
T ss_pred HHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 2222211 0223455667788999999998776
No 132
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=2.4e-19 Score=188.13 Aligned_cols=108 Identities=20% Similarity=0.173 Sum_probs=100.5
Q ss_pred ChHHHHHHHHcCCHHHHHHHHHcCCCCCCCC------CCCCCChHHHHHHH---hCCHHHHHHHHHCCCCCCCCCCCCCc
Q 010590 285 EALALHYAVENCSREVVKALLELGAADVNYP------AGPAGKTPLHIAAE---MVSPDMVAVLLDHHADPNVRTVDGVT 355 (506)
Q Consensus 285 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~------~~~~g~tpLh~A~~---~~~~~~v~~Ll~~ga~~~~~d~~g~t 355 (506)
..+.||.|+..|+.++|+.||+.|+ ++|.. + ..|+||||+|+. .|+.+++++|+++|+|+|.+|..|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~-~~n~~~~~~~~~-~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQ-APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTC-CSSSCBCCSSSC-CSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcc-cccCCCCCcccc-cccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCc
Confidence 4578999999999999999999999 99987 6 799999999977 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHhccCccccccCCCCCCCCCCccccCCCCCCc
Q 010590 356 PLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGILNEPSSSTATVIYPPPMSC 423 (506)
Q Consensus 356 pLh~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~tplh~a~ 423 (506)
|||+|+. .++.+++++|+++|||++.+ +..|.||||+|+
T Consensus 210 pLh~A~~------------------~g~~~~v~~Ll~~ga~~~~~-----------d~~g~tpl~~A~ 248 (497)
T 3lvq_E 210 ALHYAAL------------------YNQPDCLKLLLKGRALVGTV-----------NEAGETALDIAR 248 (497)
T ss_dssp HHHHHTT------------------TTCHHHHHHHHHTCCCCSCC-----------CTTCCCHHHHHH
T ss_pred HHHHHHH------------------cCCHHHHHHHHHcCCCCCCc-----------CCCCCCHHHHHH
Confidence 9999997 78999999999999999998 556779999984
No 133
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=4.8e-18 Score=140.22 Aligned_cols=80 Identities=31% Similarity=0.344 Sum_probs=70.7
Q ss_pred CCCCChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 010590 281 LNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDIL 360 (506)
Q Consensus 281 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpLh~A 360 (506)
.+.+|.||||+|+..|+.+++++|++.|+ ++|.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~i~~~d-~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGA-DVAAKD-KNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCC-CCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 45578899999999999999999999998 999888 8999999999999999999999999999999999999999999
Q ss_pred HH
Q 010590 361 RT 362 (506)
Q Consensus 361 ~~ 362 (506)
+.
T Consensus 98 ~~ 99 (110)
T 2zgd_A 98 ID 99 (110)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 134
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=9.7e-17 Score=132.32 Aligned_cols=91 Identities=26% Similarity=0.400 Sum_probs=78.4
Q ss_pred ccccccCCccccHHHHHHHhcCCHHHHHHHHhcCCCCC-----CChHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010590 246 AAAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNL-----DEALALHYAVENCSREVVKALLELGAADVNYPAGPAG 320 (506)
Q Consensus 246 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~d~-----~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~v~~~~~~~g 320 (506)
.......|.+|.||||+|+..|+.+++++|+ +.|+++ +|+||||+|+..|+.+++++|+++|+ +++.+| ..|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga-~~~~~d-~~g 90 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA-DVXAQD-KFG 90 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCC-TTS
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-Cccccc-cCC
Confidence 3445567889999999999999999999999 566654 58999999999999999999999999 999999 899
Q ss_pred ChHHHHHHHhCCHHHHHHH
Q 010590 321 KTPLHIAAEMVSPDMVAVL 339 (506)
Q Consensus 321 ~tpLh~A~~~~~~~~v~~L 339 (506)
+||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999987
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.31 E-value=4.1e-12 Score=111.32 Aligned_cols=125 Identities=16% Similarity=0.198 Sum_probs=90.3
Q ss_pred EEEEE-CCeEEeeeehhhcccCHHHHHhhCC-CCC-CCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhh
Q 010590 27 VTFSV-EGRLVHAHRCILAARSLFFRKFFCG-PDP-PSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFL 103 (506)
Q Consensus 27 v~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~-~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~ 103 (506)
|+|+. +|++|++||.| |++|+||++||.+ ++. |+ ....|+|++|++.+++.|++|+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~--------------------~~~~Ipl~~V~~~iL~kViey~ 61 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEG--------------------DDDPVPLPNVNAAILKKVIQWC 61 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS--------------------------CEECTTSCHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccc--------------------cCCCcCCCCccHHHHHHHHHHH
Confidence 67765 89999999999 8999999999987 665 43 3468999999999999999999
Q ss_pred hccceeccCCC---------CCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHhhhhHHHHH
Q 010590 104 YSGQVSIVPQK---------HEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANMVEKASIEDVM 174 (506)
Q Consensus 104 Ytg~~~~~~~~---------~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~l~~~~~~~v~ 174 (506)
|+..-...+.. ..+..-..+|+. + ....+.+|+.+|..+++..|..+|.+.+...++..+.+.+.
T Consensus 62 ~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~--i----d~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir 135 (159)
T 2ast_A 62 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLK--V----DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 135 (159)
T ss_dssp HHTTTCCC-----------CCCCCHHHHHHTC--S----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHcCcCCCCcccccccccchhhhhHHHHHHHc--C----CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 99874321111 000000111121 1 12456899999999999999999999999888777777766
Q ss_pred HHHH
Q 010590 175 KVLI 178 (506)
Q Consensus 175 ~~L~ 178 (506)
..+.
T Consensus 136 ~~f~ 139 (159)
T 2ast_A 136 KTFN 139 (159)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 6654
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.12 E-value=1.3e-10 Score=92.62 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=46.1
Q ss_pred EEEEE-CCeEEeeeehhhcccCHHHHHhhCC--CCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhh
Q 010590 27 VTFSV-EGRLVHAHRCILAARSLFFRKFFCG--PDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFL 103 (506)
Q Consensus 27 v~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~ 103 (506)
|+++. +|++|++||.| |++|+||++||.+ ++.|+ ....|+|++|++.+++.+++|+
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~--------------------~~~~I~l~~V~~~iL~kViey~ 62 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN--------------------ETNEVNFREIPSHVLSKVCMYF 62 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC----------------------------CEEECTTSCHHHHHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCcccc--------------------CCCceECCCCCHHHHHHHHHHH
Confidence 55655 78999999999 9999999999986 45554 3578999999999999999999
Q ss_pred h
Q 010590 104 Y 104 (506)
Q Consensus 104 Y 104 (506)
|
T Consensus 63 ~ 63 (97)
T 4ajy_C 63 T 63 (97)
T ss_dssp H
T ss_pred H
Confidence 9
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.81 E-value=1.1e-08 Score=87.43 Aligned_cols=120 Identities=17% Similarity=0.223 Sum_probs=85.4
Q ss_pred EEEEE-CCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 27 VTFSV-EGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 27 v~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
|+|+. +|++|.+||.+ |.+|++|++||.+.. ...|+|++|++.+++.+++|+|+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~------------------------~~~Ipl~~V~~~iL~kVieyc~~ 58 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG------------------------MDPVPLPNVNAAILKKVIQWCTH 58 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC------------------------CSSEECTTCCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC------------------------CCceecCCcCHHHHHHHHHHHHH
Confidence 67766 88999999998 899999999997521 14699999999999999999999
Q ss_pred cceeccCCCC---------CCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 010590 106 GQVSIVPQKH---------EPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANMVEKASIEDVMKV 176 (506)
Q Consensus 106 g~~~~~~~~~---------~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~l~~~~~~~v~~~ 176 (506)
..-...+... .+..--.+|+. + ....+.+|+.||..+++..|..+|.+.+.+.++..+.+.+...
T Consensus 59 h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~--v----d~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~ 132 (141)
T 1fs1_B 59 HKDDPPPPEDDENKEKRTDDIPVWDQEFLK--V----DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKT 132 (141)
T ss_dssp HTTCC-----------------HHHHHHTC--S----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hccCCCccccccccccchhhhhHHHHHHHh--C----CHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 7633211100 00000001111 0 1244689999999999999999999999988877666665544
Q ss_pred H
Q 010590 177 L 177 (506)
Q Consensus 177 L 177 (506)
+
T Consensus 133 f 133 (141)
T 1fs1_B 133 F 133 (141)
T ss_dssp T
T ss_pred c
Confidence 3
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.68 E-value=4.2e-09 Score=92.03 Aligned_cols=122 Identities=11% Similarity=0.175 Sum_probs=60.8
Q ss_pred EEEEE-CCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 27 VTFSV-EGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 27 v~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
|+|+. +|+.|.+||.| |.+|+||++||.+.. ....|+|++|++.+++.|++|+|+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-----------------------~~~~Ipl~~V~~~iL~kVieyc~~ 61 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC-----------------------VDNGVPLPNVTSKILAKVIEYCKR 61 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC-----------------------------------CCTTSCHHHHHHHHHC---
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC-----------------------CCCceeCCcCcHHHHHHHHHHHHH
Confidence 66664 79999999999 899999999997642 124799999999999999999999
Q ss_pred cceeccCCC----------CCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 010590 106 GQVSIVPQK----------HEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANMVEKASIEDVMK 175 (506)
Q Consensus 106 g~~~~~~~~----------~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~l~~~~~~~v~~ 175 (506)
..-...+.. ..+..--.+|+. + ....+.+|+.||..+++..|..+|.+.+...++..+.+.+..
T Consensus 62 h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~--v----d~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~ 135 (160)
T 2p1m_A 62 HVEAAASKAEAVEGAATSDDDLKAWDADFMK--I----DQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRT 135 (160)
T ss_dssp ---------------------------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred cccCCCcccccccccccccchhhHHHHHHHc--C----CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 874321100 000000011111 0 123458899999999999999999999998887777777666
Q ss_pred HHH
Q 010590 176 VLI 178 (506)
Q Consensus 176 ~L~ 178 (506)
.+.
T Consensus 136 ~f~ 138 (160)
T 2p1m_A 136 TFN 138 (160)
T ss_dssp HTT
T ss_pred HcC
Confidence 554
No 139
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.03 E-value=3.5e-05 Score=62.10 Aligned_cols=97 Identities=18% Similarity=0.268 Sum_probs=73.2
Q ss_pred EEEEECCeEEeeeehhhcccC-HHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 27 VTFSVEGRLVHAHRCILAARS-LFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 27 v~~~v~~~~~~aHr~vLaa~S-~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
|+|.|||+.|...+..|+... .+|.+||.+...-.. .+. ...++-+ +-+|..|+.||+|+.+
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~-----~~d-----------~~~~~fi-DRdp~~F~~IL~~lr~ 70 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDS-----DKD-----------ETGAYLI-DRDPTYFGPVLNYLRH 70 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGG-----GBC-----------TTSCEEE-CSCHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCc-----CCC-----------CCceEEe-cCChHHHHHHHHHhCC
Confidence 678899999999999998765 578999876421000 000 1244555 6799999999999999
Q ss_pred cceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 010590 106 GQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLA 162 (506)
Q Consensus 106 g~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~ 162 (506)
|++.+.... | ...+++.|..|+++.|.++|++++.
T Consensus 71 g~l~~p~~~------~----------------~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 71 GKLVINKDL------A----------------EEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp SCCCCCTTS------C----------------HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CeeCCCCCC------C----------------HHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 998775432 1 2468899999999999999998765
No 140
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.02 E-value=2e-05 Score=62.49 Aligned_cols=90 Identities=19% Similarity=0.217 Sum_probs=64.5
Q ss_pred EEEEE-CCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 27 VTFSV-EGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 27 v~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
|+++. +|.+|.++|.+ |.+|.+++.||.+++ |. ....|+|++|+..+++.+++|+|.
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~--------------------~~~~Iplp~V~~~iL~kVieyc~~ 63 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RE--------------------SKGRIELKQFDSHILEKAVEYLNY 63 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TT--------------------CTTEEEETTSCHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-cc--------------------CCCceecCCcCHHHHHHHHHHHHH
Confidence 66766 89999999997 899999999998765 32 236899999999999999999998
Q ss_pred cceeccCC--CCCCcCCccccCccCccchhHHHHHHHHHHHHHhhC
Q 010590 106 GQVSIVPQ--KHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFG 149 (506)
Q Consensus 106 g~~~~~~~--~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~ 149 (506)
-.-...+. ...+ .++ .+ ....+.+|+.||..++
T Consensus 64 h~~~~~~~~~~~~i----~~w---~v----d~~~lfeLi~AAnyLd 98 (99)
T 1hv2_A 64 NLKYSGVSEDDDEI----PEF---EI----PTEMSLELLLAADYLS 98 (99)
T ss_dssp HHHHHHHCSSCSSC----CCC---CC----CHHHHHHHHHHHHHHC
T ss_pred hcccCCCccccccC----CCc---cC----CHHHHHHHHHHHHHhC
Confidence 65222110 0000 011 11 1355688999998875
No 141
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.00 E-value=1e-05 Score=63.81 Aligned_cols=90 Identities=18% Similarity=0.186 Sum_probs=60.5
Q ss_pred EEEEE-CCeEEeeeehhhcccCHHHHHhhCCC-C-CCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhh
Q 010590 27 VTFSV-EGRLVHAHRCILAARSLFFRKFFCGP-D-PPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFL 103 (506)
Q Consensus 27 v~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~~-~-~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~ 103 (506)
|+++. +|.+|.++|.+ |.+|.+++.||.+. . .|+ ....|+|++|+..+++.+++|+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~--------------------~~~~Ipl~~V~~~iL~kVieyc 61 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN--------------------ETNEVNFREIPSHVLSKVCMYF 61 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC----------------------------CEEECSSCCHHHHHHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccc--------------------cCCceeCCCCCHHHHHHHHHHH
Confidence 56665 89999999997 89999999999752 2 332 2468999999999999999999
Q ss_pred hccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhC
Q 010590 104 YSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFG 149 (506)
Q Consensus 104 Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~ 149 (506)
|.-.-..... ..+ .++ .+. ...+.+|+.||..++
T Consensus 62 ~~h~~~~~~~-~~i----~~w---~vd----~~~l~eLi~AAnyLd 95 (96)
T 2fnj_C 62 TYKVRYTNSS-TEI----PEF---PIA----PEIALELLMAANFLD 95 (96)
T ss_dssp HHHHHHHSCC-SCC----CCC---CCC----TTTHHHHHHHHHHHT
T ss_pred HHccccCCCc-ccC----CCc---ccC----HHHHHHHHHHHHHhC
Confidence 9855221110 000 011 111 134678999998875
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.87 E-value=8.2e-05 Score=65.15 Aligned_cols=130 Identities=19% Similarity=0.238 Sum_probs=86.5
Q ss_pred eEEEEE-CCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhh
Q 010590 26 DVTFSV-EGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLY 104 (506)
Q Consensus 26 Dv~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Y 104 (506)
-|+|+. +|..|.+++.+ |.+|.+++.|+.+...+.. .. .....|+|++|+..+++.|++|+|
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~-~~---------------~~~~~IplpnV~s~iL~kVieyc~ 70 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDD-ED---------------DDEIVMPVPNVRSSVLQKVIEWAE 70 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC---------------------------CEEECTTCCHHHHHHHHHHHH
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccc-cc---------------cCCCceeeCCCCHHHHHHHHHHHH
Confidence 466655 78999999998 6889999999975322100 00 013679999999999999999999
Q ss_pred ccceeccCC--------CCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 010590 105 SGQVSIVPQ--------KHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLANMVEKASIEDVMKV 176 (506)
Q Consensus 105 tg~~~~~~~--------~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~~~l~~~~~~~v~~~ 176 (506)
.-.-...+. ...+..--.+|+. + ....+.+|+.||..+++..|..++.+.+...++..+.+.+...
T Consensus 71 ~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~--v----d~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~ 144 (169)
T 3v7d_A 71 HHRDSNFPDEDDDDSRKSAPVDSWDREFLK--V----DQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRT 144 (169)
T ss_dssp HTTTCCCCC--------CCCCCHHHHHHTC--S----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HcccCCCcccccccccccccccHHHHHHHc--C----CHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 865332111 0000000011221 1 1245689999999999999999999999888877777766655
Q ss_pred HH
Q 010590 177 LI 178 (506)
Q Consensus 177 L~ 178 (506)
+.
T Consensus 145 f~ 146 (169)
T 3v7d_A 145 FN 146 (169)
T ss_dssp HT
T ss_pred cC
Confidence 43
No 143
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.07 E-value=0.00052 Score=55.48 Aligned_cols=90 Identities=19% Similarity=0.178 Sum_probs=60.7
Q ss_pred EEEEE-CCeEEeeeehhhcccCHHHHHhhCCC--CCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhh
Q 010590 27 VTFSV-EGRLVHAHRCILAARSLFFRKFFCGP--DPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFL 103 (506)
Q Consensus 27 v~~~v-~~~~~~aHr~vLaa~S~yF~~~f~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~ 103 (506)
|+|+- +|.+|.+.|.+ |..|..++.|+.+. +.|. ....|+|++|+..+++.+++|+
T Consensus 19 v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~--------------------~~~~IplpnV~s~iL~kVieyc 77 (112)
T 1vcb_B 19 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN--------------------ETNEVNFREIPSHVLSKVCMYF 77 (112)
T ss_dssp EEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC----------------------------CEEECSSCCHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccc--------------------cCCceeCCCCCHHHHHHHHHHH
Confidence 66663 89999999995 68999999999752 2222 2368999999999999999999
Q ss_pred hccceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhC
Q 010590 104 YSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFG 149 (506)
Q Consensus 104 Ytg~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~ 149 (506)
|.-.-..... ..+ .+| .+ ....+.+|+.||..++
T Consensus 78 ~~h~~~~~~~-~~i----~~w---~v----d~~~lfeLi~AAnyLd 111 (112)
T 1vcb_B 78 TYKVRYTNSS-TEI----PEF---PI----APEIALELLMAANFLD 111 (112)
T ss_dssp HHHHHHSSCS-SCC----CCC---CC----CHHHHHHHHHHHHHHT
T ss_pred HHhhhccCCc-CCC----CCc---cc----CHHHHHHHHHHHHHhC
Confidence 8754321110 011 011 11 1355788999998875
No 144
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.78 E-value=0.0047 Score=54.87 Aligned_cols=97 Identities=18% Similarity=0.268 Sum_probs=71.8
Q ss_pred EEEEECCeEEeeeehhhcccC-HHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 27 VTFSVEGRLVHAHRCILAARS-LFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 27 v~~~v~~~~~~aHr~vLaa~S-~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
|+|.|||+.|..-+..|.... .+|.+||.+...-.. . ++ ....+-+ |-+|..|+.||+|+.+
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~---~--~D-----------e~geyFI-DRDP~~F~~ILnyLRt 76 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDS---D--KD-----------ETGAYLI-DRDPTYFGPVLNYLRH 76 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC---------BC-----------TTCCEEE-CSCSTTHHHHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCc---c--cC-----------CCccEEe-cCChHHHHHHHHHhcC
Confidence 677899999999999997654 478899876421000 0 00 1244555 5689999999999999
Q ss_pred cceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 010590 106 GQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLA 162 (506)
Q Consensus 106 g~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l~ 162 (506)
|++.+.... | ...++..|..|+++.|...|++.+.
T Consensus 77 G~L~lP~~~------~----------------~~~l~eEA~FygL~~Lv~~l~~~i~ 111 (202)
T 3drx_A 77 GKLVINKDL------A----------------EEGVLEEAEFYNITSLIKLVKDKIR 111 (202)
T ss_dssp SCCCCCTTS------C----------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CccCCCCCC------C----------------HHHHHHHHHHCCcHHHHHHHHHHHH
Confidence 999876443 1 2458899999999999999988875
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=93.74 E-value=0.067 Score=43.16 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=58.4
Q ss_pred EEEEECCeEEeeeehhhcccCH-HHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 27 VTFSVEGRLVHAHRCILAARSL-FFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 27 v~~~v~~~~~~aHr~vLaa~S~-yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
|+|.|||+.|..-+..|..... ++.+||.+.... ......+-+ +-+|..|+.||.|+.+
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~-------------------~~~~g~~Fi-DRdp~~F~~ILnylR~ 66 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNY-------------------DPVLNEYFF-DRHPGVFAQIINYYRS 66 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTE-------------------ETTTTEEEE-CSCTTTHHHHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCC-------------------CCCCCcEEE-ecChHHHHHHHHHhcC
Confidence 7889999999999999975532 344454431100 002345655 5689999999999999
Q ss_pred cceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHH
Q 010590 106 GQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQ 152 (506)
Q Consensus 106 g~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~ 152 (506)
|++.+.... | ...+++.|..|+++.
T Consensus 67 G~l~~p~~~------~----------------~~~~~~Ea~fy~i~~ 91 (115)
T 3kvt_A 67 GKLHYPTDV------C----------------GPLFEEELEFWGLDS 91 (115)
T ss_dssp SCBCCCSSS------C----------------HHHHHHHHHHHTCCG
T ss_pred CCCCCCCcc------c----------------HHHHHHHHHHhCCCh
Confidence 998776442 1 346888999998854
No 146
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=91.74 E-value=0.32 Score=39.66 Aligned_cols=86 Identities=16% Similarity=0.207 Sum_probs=57.7
Q ss_pred eEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 26 DVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 26 Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
=|+|.|||+.|..-+..|.... ..||.. .+. . .+. ......+-+ +=+|..|+.||.|+-+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p---~S~L~~--~~~------~-~~~-------~~~~g~~Fi-DRdp~~F~~ILnflR~ 73 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYP---DTLLGS--TEK------E-FFF-------NEDTKEYFF-DRDPEVFRCVLNFYRT 73 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTST---TSSTTS--SGG------G-GTB-------CSSSCSEEE-CSCHHHHHHHHHHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCC---Cceecc--cCC------c-ccc-------cCCCCcEEE-cCChHHHHHHHHHHhc
Confidence 3778899999999999996532 223322 100 0 000 012345555 4599999999999999
Q ss_pred cceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHH
Q 010590 106 GQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQL 153 (506)
Q Consensus 106 g~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l 153 (506)
|++.+.... | ...+.+.|+.|+++.+
T Consensus 74 G~l~~p~~~------~----------------~~~l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 74 GKLHYPRYE------C----------------ISAYDDELAFYGILPE 99 (124)
T ss_dssp SCBCCCTTS------C----------------HHHHHHHHHHTTCCGG
T ss_pred CCCCCCCCc------C----------------HHHHHHHHHHcCCChH
Confidence 998765432 1 3568899999999765
No 147
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=89.51 E-value=0.18 Score=39.52 Aligned_cols=85 Identities=11% Similarity=-0.005 Sum_probs=55.9
Q ss_pred EEEEECCeEEeeeehhhcccC-HHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 27 VTFSVEGRLVHAHRCILAARS-LFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 27 v~~~v~~~~~~aHr~vLaa~S-~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
|+|.|||+.|...+..|+..- ..+.+|+.... ... ....++-+ +-+|..|+.||.|+-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~-----------~~~--------~~~~eyFi-DRdp~~F~~ILnflR~ 62 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNR-----------YYD--------PLRNEYFF-DRNRPSFDAILYFYQS 62 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGG-----------GEE--------TTTTEEEE-CSCSTTHHHHHHHHHT
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhcccc-----------ccC--------CCceeEEE-cCChHHHHHHHHHHhc
Confidence 688999999999999995421 11222221100 000 01345555 5689999999999999
Q ss_pred -cceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHH
Q 010590 106 -GQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQL 153 (506)
Q Consensus 106 -g~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l 153 (506)
|++.+.... | ...+.+.|..|+++.+
T Consensus 63 ~G~l~~p~~~------~----------------~~~~~~Ea~fy~i~~~ 89 (100)
T 1t1d_A 63 GGRLRRPVNV------P----------------LDVFSEEIKFYELGEN 89 (100)
T ss_dssp TSCCCCCTTS------C----------------HHHHHHHHHHTTCCHH
T ss_pred CCcccCCCCC------C----------------HHHHHHHHHHcCCCHH
Confidence 898765442 1 3568899999998654
No 148
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=87.69 E-value=0.5 Score=39.40 Aligned_cols=86 Identities=16% Similarity=0.207 Sum_probs=57.5
Q ss_pred eEEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc
Q 010590 26 DVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS 105 (506)
Q Consensus 26 Dv~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt 105 (506)
=|+|.|||+.|..-+..|.... ..||... +. . ... ......+-+ |=++..|+.||+|+-+
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~--~~------~-~~~-------~~~~g~yFi-DRdp~~F~~ILnflR~ 95 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGST--EK------E-FFF-------NEDTKEYFF-DRDPEVFRCVLNFYRT 95 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSG--GG------G-GSE-------ETTTTEEEE-CSCHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCC---Ceeeccc--CC------c-ccc-------cCCCCeEEE-eCCcHHHHHHHHHHhc
Confidence 4778899999999999996432 2233320 00 0 000 002345656 4599999999999999
Q ss_pred cceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHH
Q 010590 106 GQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQL 153 (506)
Q Consensus 106 g~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l 153 (506)
|++.+.... | ...+.+.|+.|+++.+
T Consensus 96 G~l~~p~~~------~----------------~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 96 GKLHYPRYE------C----------------ISAYDDELAFYGILPE 121 (140)
T ss_dssp SSBCCCTTS------C----------------HHHHHHHHHHHTCCGG
T ss_pred CCcCCCCCc------C----------------HHHHHHHHHHcCCChH
Confidence 998765442 1 3568899999999765
No 149
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=82.20 E-value=0.59 Score=36.87 Aligned_cols=85 Identities=13% Similarity=0.171 Sum_probs=56.5
Q ss_pred EEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhcc
Q 010590 27 VTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYSG 106 (506)
Q Consensus 27 v~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Ytg 106 (506)
|+|.|||+.|..-+..|..... .||.. . +.. ... ......+-+ +=+|..|+.||+|+-+|
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~-~-~~~----~~~----------~~~~~~~Fi-DRdp~~F~~ILnflR~g 61 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGS-S-ERD----FFY----------HPETQQYFF-DRDPDIFRHILNFYRTG 61 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTS-G-GGG----GGE----------EGGGTEEEE-CSCTTTHHHHHHHHHHS
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccc-c-CCc----ccc----------cCCCCcEEE-eCCcHHHHHHHHHHhcC
Confidence 7899999999999999965322 23322 1 000 000 002345555 44899999999999999
Q ss_pred ceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHH
Q 010590 107 QVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQL 153 (506)
Q Consensus 107 ~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l 153 (506)
++.+.... | ...+.+.|+.|+++.+
T Consensus 62 ~l~~p~~~------~----------------~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 62 KLHYPRHE------C----------------ISAYDEELAFFGLIPE 86 (105)
T ss_dssp CBCCCTTS------C----------------HHHHHHHHHHHTCCSC
T ss_pred CCCCCCCc------C----------------HHHHHHHHHHcCCCHH
Confidence 98765432 1 3568899999999664
No 150
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.61 E-value=4.6 Score=31.48 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=30.9
Q ss_pred chhHHHHH-----HHHHHHHHhhCH---------HHHHHHHHHHHHHHHhh------hhHHHHHHHHH
Q 010590 131 CTSAVDLA-----LDTLAAARYFGV---------EQLALLTQKQLANMVEK------ASIEDVMKVLI 178 (506)
Q Consensus 131 c~~~~~~~-----~~L~~~A~~~~~---------~~l~~l~~~~l~~~l~~------~~~~~v~~~L~ 178 (506)
|+++..+| .+|...|..|.. ++|..+..+.+..++++ ..++.++.|+.
T Consensus 13 Cl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sdv~~E~~vf~av~~Wv~ 80 (105)
T 2eqx_A 13 CLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWIN 80 (105)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTCEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 78877776 677777777766 45555666666666543 24556666664
No 151
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.32 E-value=6.9 Score=30.45 Aligned_cols=33 Identities=12% Similarity=0.304 Sum_probs=28.1
Q ss_pred hhhHHHHHHHHHHhhhhhhHHHHHHHhHHHHhc
Q 010590 167 KASIEDVMKVLIASRKQDMHQLWTTCSHLVAKS 199 (506)
Q Consensus 167 ~~~~~~v~~~L~~a~~~~~~~L~~~cl~~i~~~ 199 (506)
.+..+||+.++.+|..+++..|.+.|..|+..+
T Consensus 7 ~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~n 39 (105)
T 2eqx_A 7 GVQVGNCLQVMWLADRHSDPELYTAAKHCAKTH 39 (105)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 356788999999999999999999999998765
No 152
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=45.40 E-value=4.4 Score=37.81 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=22.6
Q ss_pred CCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 010590 115 HEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQ 160 (506)
Q Consensus 115 ~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~ 160 (506)
..+...|++++..+++..+ +..++..|+.++.+.+...|.+.
T Consensus 125 ~~L~~~c~~~L~~~l~~~n----~~~i~~~A~~~~~~~L~~~~~~~ 166 (279)
T 3i3n_A 125 IRLKEFCGEFLKKKLHLSN----CVAIHSLAHMYTLSQLALKAADM 166 (279)
T ss_dssp HHHHHHHHHHHHHHCCTTT----HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcch----HHHHHHHHHHcCcHHHHHHHHHH
Confidence 3456778888877766222 22244445555555554444443
No 153
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=43.49 E-value=3.4 Score=37.96 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=22.8
Q ss_pred CCCcCCccccCccCcc---chhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 010590 115 HEPRPNCGERGCWHTH---CTSAVDLALDTLAAARYFGVEQLALLTQKQL 161 (506)
Q Consensus 115 ~~~~~~c~~~l~~~l~---c~~~~~~~~~L~~~A~~~~~~~l~~l~~~~l 161 (506)
..++..|++++..+++ |..+ +..|+.++.+.+...|.+.+
T Consensus 117 ~~l~~~c~~~L~~~l~~~n~~~i-------~~~A~~~~~~~L~~~~~~~i 159 (256)
T 3hve_A 117 TDLKTLCCEFLEGCIAAENCIGI-------RDFALHYCLHHVHYLATEYL 159 (256)
T ss_dssp HHHHHHHHHHHHHTCCSSTTHHH-------HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCHhhHHHH-------HHHHHHcCcHHHHHHHHHHH
Confidence 3456678888877766 5544 44455555555555444443
No 154
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=39.55 E-value=21 Score=36.59 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=53.7
Q ss_pred EEEEECCeEEeeeehhhcccCHHHHHhhCCCCCCCCCCCCccccCCCCCCCCCCCCCceEEcCCCCHHHHHHHhhhhhc-
Q 010590 27 VTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPATASRINQGPPSPASRPTGVIPVNSVGYEVFLLLLQFLYS- 105 (506)
Q Consensus 27 v~~~v~~~~~~aHr~vLaa~S~yF~~~f~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~i~~~~~~~ll~f~Yt- 105 (506)
|+|.|||+.|...+..|... -..++.. +... ..... ....++=+ |=+|..|+.+|.|+.|
T Consensus 54 v~lNVgG~~f~t~~~tL~~~---p~s~l~~-~~~~------~~~~~--------~~~~~~f~-DR~~~~F~~IL~~~r~~ 114 (514)
T 2r9r_B 54 VVINISGLRFETQLKTLAQF---PETLLGD-PKKR------MRYFD--------PLRNEYFF-DRNRPSFDAILYYYQSG 114 (514)
T ss_dssp EEEEETTEEEEEEHHHHTTS---TTSTTTC-HHHH------GGGEE--------TTTTEEEE-CSCHHHHHHHHHHHHHT
T ss_pred EEEEeCCEEEEecHHHHhcC---CCCcccc-cccC------CcccC--------CCCCCEEE-cCChHHHHHHHHHHhcC
Confidence 67789999999999999542 1222221 1000 00000 01244555 5699999999999999
Q ss_pred cceeccCCCCCCcCCccccCccCccchhHHHHHHHHHHHHHhhCHHHH
Q 010590 106 GQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQL 153 (506)
Q Consensus 106 g~~~~~~~~~~~~~~c~~~l~~~l~c~~~~~~~~~L~~~A~~~~~~~l 153 (506)
|++...... | ...+.+.|+.|++++.
T Consensus 115 g~l~~p~~~------~----------------~~~~~~E~~f~~i~~~ 140 (514)
T 2r9r_B 115 GRLRRPVNV------P----------------LDIFSEEIRFYELGEE 140 (514)
T ss_dssp SCCCCCTTS------C----------------HHHHHHHHHHTTCCHH
T ss_pred CccccCCcc------c----------------HHHHHHHHHhcCCCHH
Confidence 998765442 2 2357778888888543
Done!