Citrus Sinensis ID: 010591

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500------
Protein Sequence
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL
Secondary Structure (PSIPRED)
ccccccccccccEEEcccccccccHHHHcccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccHHccccHHHHHHcccccccccccEEEEccEEEEEccccccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEccccccEEEccccccccccHHccccccEccccccccccccccccccccEEccccHHHccccHHccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccEEcccccEEcccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHHHHHHHccEHHHcccccEEEEcccHHHHHHHHHHHHcHHHHcccccHHHHHHHccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEEEEEcccccccccEEcccccccccccEEEHHHHcHHHHHHHHHHcccEEEEccccc
Coil and Loop (DISEMBL)
meswiygsegkgilysdevdssvdpftrsRKTLmaweskpsynfdinklfsdsddvenMEFMDlcftdltrkpchsnsslgtpngevgsdtnerltttpcmvtsnsfcgpesgskissSCMKSISQDSALIDlklgrlvdgrdkqcgklfkersvassahpslmakkvrttsscsqtplcqvygcnkdlssskdyhkrhkvcdvhsktpkvivngNEQRFCQQCSRFHllaefddskRSCRRRLAghnerrrkpqfnihsdRSRKLLQLyqgselpwtslqngtsfvypdmlpggilfperyepvkqikfserppyspqlavpntneqlltksslyqgnkkqhrlaipldtaltfqdssgishssgALSLLSAqsqsmpnhlsgipmarplisqVSHTHLnlgqnfvktsgttplgkyetkgfytsgmnsmdgaqmrslmvpdaghafelkvetdevsqesdffkdkncyspeqgfTVDLIQLSSHLKRVEQQrnsiqpkqhtddl
Flexible Loop (DISEMBL)
meswiygsegkgilysdevdssVDPFTRSRKTlmaweskpsynfdINKLFSDSDDVENMEFMDLCFTDLTRKPCHsnsslgtpngevgsdtneRLTTTPCMVTSNSFCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFkersvassahpslmakkvrttsscsqtplCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLlaefddskrscrrrlaghnerrrkpqfnihsdrsRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQnfvktsgttplgKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVeqqrnsiqpkqhtddl
Low Complexity Region (SEG)
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPEsgskissscmksisqdsALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDssgishssgalsllsaqsqsMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL
Disordered region (IsUnstruct)
****************************************SYNFDINKLFSDSDDVENMEFMDLCFTDLTR*********************************************************ALIDLKLGRLVDGRD*QCG*****************************TPLCQVYGCNKDLS**KDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD*******************************LLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQI*************************************AIPLD****************************************LISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYT*************************************FFKDKNCYSPEQGFTVDLIQL***********************
Disordered Region (DISOPRED)
***WI**SEGKGILYSDE***************MAWESKPSYNFDINKLF****DVENMEFMDLCF*******************************************************************KLGRLVDG****************************************VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR*********************************************************************************************************************************************************************************************************************************************FTVDLIQLS**********************
Disordered Region (DISEMBL)
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCG*************SISQDSALIDLKLGRLVDGRDKQCGKLFK************************QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKV**********FFKDKNCYSPEQGFTVDLIQLSSHL*******************
Disordered Region (DISPRO)
**SWIYGS*GKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPC********************************FC*********************LIDLKLGRLVDGR*********************************QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRR*********************************WTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKF**R***SP*****************************************************************************************************TKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQ*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	506	2.2.26 [Sep-21-2011]
Q94JW8	405	Squamosa promoter-binding	yes	no	0.596	0.745	0.403	1e-51
Q5Z818	475	Squamosa promoter-binding	yes	no	0.292	0.311	0.496	6e-35
A2YGR5	475	Squamosa promoter-binding	N/A	no	0.292	0.311	0.496	7e-35
A3A2Z8	469	Squamosa promoter-binding	no	no	0.249	0.268	0.601	2e-33
A2X0Q6	469	Squamosa promoter-binding	N/A	no	0.249	0.268	0.601	2e-33
P0DI11	359	Squamosa promoter-binding	no	no	0.217	0.306	0.596	9e-33
B9DI20	359	Squamosa promoter-binding	no	no	0.217	0.306	0.596	9e-33
Q8S9L0	396	Squamosa promoter-binding	no	no	0.227	0.290	0.544	6e-32
Q01JD1	360	Squamosa promoter-binding	N/A	no	0.173	0.244	0.636	1e-31
Q7XT42	360	Squamosa promoter-binding	no	no	0.173	0.244	0.636	1e-31

>sp|Q94JW8|SPL6_ARATH Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2

 Score =  204 bits (519), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/369 (40%), Positives = 190/369 (51%), Gaps = 67/369 (18%)

Query: 131 IDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLS 190
           ID KL   +D        L  +    SS   +L +KK R ++ CSQ PLCQVYGC+KDLS
Sbjct: 83  IDFKLRSFLD--------LGNDDDDTSSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLS 134

Query: 191 SSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNER 250
           SSKDYHKRH+VC+ HSKT  VIVNG EQRFCQQCSRFH L+EFDD KRSCRRRLAGHNER
Sbjct: 135 SSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNER 194

Query: 251 RRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILF----PERYEPVK 306
           RRKP F     +  KLL+  Q  ++        +S V P+  PG +L+     + +   +
Sbjct: 195 RRKPAFYFLPGKRHKLLRTSQ--DVVGNKFLENSSLVLPESFPGSLLYRVIDEDDHRTSR 252

Query: 307 QIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSG 366
            + F + P  S     P TNEQ    S  Y+     +   +   +++     +  S S+ 
Sbjct: 253 LVSFKDEPTCS---MFP-TNEQ--NSSRTYESKPAIYSTEV---SSIWDLHETAASRSTR 303

Query: 367 ALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTS 426
           ALSLLSAQSQ    HLS  P     I+Q +       QN   +S T              
Sbjct: 304 ALSLLSAQSQ---QHLSKFPNTTFSITQPN-------QNLNHSSST-------------- 339

Query: 427 GMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSH 486
                D  QM   +  D G       +T+     S   K  +        TVDL+QLSSH
Sbjct: 340 -----DYHQMEQPLWIDPG-------KTNSAGSSSCKGKGTS--------TVDLLQLSSH 379

Query: 487 LKRVEQQRN 495
           L+R+EQQRN
Sbjct: 380 LQRIEQQRN 388

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.
Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z818|SPL12_ORYSJ Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica GN=SPL12 PE=2 SV=1

 Score =  149 bits (375), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/149 (49%), Positives = 99/149 (66%), Gaps = 1/149 (0%)

Query: 123 SISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAH-PSLMAKKVRTTSSCSQTPLCQ 181
           ++S    +I LKLG+     +   G+  K  S AS    PS + KK++ +   +Q+  CQ
Sbjct: 122 AVSHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQ 181

Query: 182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
           V GC  DLSS+++YH++HKVC+ HSK PKVIV+G E+RFCQQCSRFH LAEFD  K+SCR
Sbjct: 182 VEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCR 241

Query: 242 RRLAGHNERRRKPQFNIHSDRSRKLLQLY 270
           RRL+ HN RRRKPQ    S  S +L  ++
Sbjct: 242 RRLSDHNARRRKPQQEAISFGSSRLATMF 270

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YGR5|SPL12_ORYSI Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1

 Score =  149 bits (375), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 74/149 (49%), Positives = 99/149 (66%), Gaps = 1/149 (0%)

Query: 123 SISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAH-PSLMAKKVRTTSSCSQTPLCQ 181
           ++S    +I LKLG+     +   G+  K  S AS    PS + KK++ +   +Q+  CQ
Sbjct: 122 AVSHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQ 181

Query: 182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
           V GC  DLSS+++YH++HKVC+ HSK PKVIV+G E+RFCQQCSRFH LAEFD  K+SCR
Sbjct: 182 VEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCR 241

Query: 242 RRLAGHNERRRKPQFNIHSDRSRKLLQLY 270
           RRL+ HN RRRKPQ    S  S +L  ++
Sbjct: 242 RRLSDHNARRRKPQQEAISFGSSRLATMF 270

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A3A2Z8|SPL3_ORYSJ Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica GN=SPL3 PE=2 SV=1

 Score =  144 bits (363), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/128 (60%), Positives = 88/128 (68%), Gaps = 2/128 (1%)

Query: 130 LIDLKLGRLVDGRDKQCGKLFKER-SVASSAHPSL-MAKKVRTTSSCSQTPLCQVYGCNK 187
           LI LKLG+     D   G+  K   S  S A PS  +AKKV+     +Q P CQV GCN 
Sbjct: 130 LIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAKKVKVAQQNTQNPHCQVEGCNV 189

Query: 188 DLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGH 247
           DLSS+K YH++H+VC+ HSKT KVIV G E+RFCQQCSRFH LAEFD  KRSCRRRL  H
Sbjct: 190 DLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDH 249

Query: 248 NERRRKPQ 255
           N RRRKPQ
Sbjct: 250 NARRRKPQ 257

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2X0Q6|SPL3_ORYSI Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica GN=SPL3 PE=2 SV=1

 Score =  144 bits (363), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/128 (60%), Positives = 88/128 (68%), Gaps = 2/128 (1%)

Query: 130 LIDLKLGRLVDGRDKQCGKLFKER-SVASSAHPSL-MAKKVRTTSSCSQTPLCQVYGCNK 187
           LI LKLG+     D   G+  K   S  S A PS  +AKKV+     +Q P CQV GCN 
Sbjct: 130 LIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAKKVKVAQQNTQNPHCQVEGCNV 189

Query: 188 DLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGH 247
           DLSS+K YH++H+VC+ HSKT KVIV G E+RFCQQCSRFH LAEFD  KRSCRRRL  H
Sbjct: 190 DLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDH 249

Query: 248 NERRRKPQ 255
           N RRRKPQ
Sbjct: 250 NARRRKPQ 257

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|P0DI11|SP13B_ARATH Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana GN=SPL13B PE=3 SV=1

 Score =  142 bits (357), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 68/114 (59%), Positives = 81/114 (71%), Gaps = 4/114 (3%)

Query: 176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDD 235
           Q P+C V GC+ D S+ ++YHKRHKVCDVHSKTP V +NG++QRFCQQCSRFH L EFD+
Sbjct: 97  QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 156

Query: 236 SKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYP 289
            KRSCR+RL GHN RRRKPQ   H  R       +QGS+L   S   G S V+P
Sbjct: 157 GKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKLLEFS---GGSHVFP 206

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|B9DI20|SP13A_ARATH Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana GN=SPL13A PE=2 SV=1

 Score =  142 bits (357), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 68/114 (59%), Positives = 81/114 (71%), Gaps = 4/114 (3%)

Query: 176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDD 235
           Q P+C V GC+ D S+ ++YHKRHKVCDVHSKTP V +NG++QRFCQQCSRFH L EFD+
Sbjct: 97  QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 156

Query: 236 SKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYP 289
            KRSCR+RL GHN RRRKPQ   H  R       +QGS+L   S   G S V+P
Sbjct: 157 GKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKLLEFS---GGSHVFP 206

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S9L0|SPL10_ARATH Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2

 Score =  139 bits (349), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 91/125 (72%), Gaps = 10/125 (8%)

Query: 161 PSLMAKKVRTTSSCSQT---PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNE 217
           PS++A+K   T SC Q+   P CQ+ GC  DLSSSKDYH++H+VC+ HSK PKV+V+G E
Sbjct: 156 PSVVARK--KTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLE 213

Query: 218 QRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ--FNIHSDRSRKLLQLYQGSEL 275
           +RFCQQCSRFH ++EFD+ KRSCR+RL+ HN RRRKPQ  F ++S+R   +    Q + +
Sbjct: 214 RRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQGVFPLNSER---VFDRRQHTSM 270

Query: 276 PWTSL 280
            W  L
Sbjct: 271 LWNGL 275

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q01JD1|SPL7_ORYSI Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. indica GN=SPL7 PE=2 SV=1

 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 72/88 (81%)

Query: 166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
           +K +  ++    P CQV GC+  L   K+YH+RHKVC+VH+K P+V+V+G EQRFCQQCS
Sbjct: 94  RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCS 153

Query: 226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
           RFH+LAEFDD+K+SCRRRLAGHNERRR+
Sbjct: 154 RFHVLAEFDDAKKSCRRRLAGHNERRRR 181

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q7XT42|SPL7_ORYSJ Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica GN=SPL7 PE=2 SV=2

 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 72/88 (81%)

Query: 166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
           +K +  ++    P CQV GC+  L   K+YH+RHKVC+VH+K P+V+V+G EQRFCQQCS
Sbjct: 94  RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCS 153

Query: 226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
           RFH+LAEFDD+K+SCRRRLAGHNERRR+
Sbjct: 154 RFHVLAEFDDAKKSCRRRLAGHNERRRR 181

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	506
359472829	611	PREDICTED: squamosa promoter-binding-lik	0.998	0.826	0.525	1e-131
255541980	512	LIGULELESS1 protein, putative [Ricinus c	0.944	0.933	0.508	1e-126
297738116	498	unnamed protein product [Vitis vinifera]	0.916	0.931	0.532	1e-120
224108868	600	hypothetical protein POPTRDRAFT_769914 [	0.964	0.813	0.488	1e-117
356502645	482	PREDICTED: squamosa promoter-binding-lik	0.909	0.954	0.439	2e-94
356498035	482	PREDICTED: squamosa promoter-binding-lik	0.918	0.964	0.420	8e-93
225456548	557	PREDICTED: squamosa promoter-binding-lik	0.980	0.890	0.439	7e-89
449441121	550	PREDICTED: uncharacterized protein LOC10	0.968	0.890	0.399	3e-86
449522424	510	PREDICTED: squamosa promoter-binding-lik	0.869	0.862	0.399	2e-78
255547135	557	LIGULELESS1 protein, putative [Ricinus c	0.974	0.885	0.407	3e-78

>gi|359472829|ref|XP_002273534.2| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis vinifera]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 273/520 (52%), Positives = 340/520 (65%), Gaps = 15/520 (2%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW +  E K  LYS+E+D + D   RSRK L  W+ +  +NF+ + L  D D VE+ME
Sbjct: 87  MESWSHALEKKMFLYSEEMDLTTDAVGRSRKLLTGWDMRTPFNFENDGLVLDRDAVESME 146

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNS-FCGPESGSKISSS 119
           FM+L   DL RK   SN S+G  +GE+G ++++R+ +   MVTSN  F G ES S++SSS
Sbjct: 147 FMELDSPDLVRKLLPSNPSVGFLSGEIGRNSSKRIVSPTNMVTSNPIFGGEESSSRLSSS 206

Query: 120 CMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPL 179
            M+S SQDS++IDLKLGRL D  D +  +  KE SV SS   S+ AK+ RTTS CSQTPL
Sbjct: 207 FMESNSQDSSIIDLKLGRLADCIDAKNNRCSKEGSVLSSLASSMPAKRARTTSVCSQTPL 266

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQV+GCN DLSSSKDYHKRHKVCDVHSKTPKVIVNG EQRFCQQCSRFHLLAEFDD KRS
Sbjct: 267 CQVHGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 326

Query: 240 CRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFP 299
           CR+RLAGHNERRRKPQ + HS + +KLLQ Y G+ +  TSL     FV+ D+LPG +  P
Sbjct: 327 CRKRLAGHNERRRKPQLDTHSGKPQKLLQSYPGTRILGTSLAKRPPFVFQDILPGSVYCP 386

Query: 300 ERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLY-QGNKKQ---------HRLA 346
           + Y    P + IK  + P YS QL +P  + QL  KS L+  G ++Q             
Sbjct: 387 DGYGQANPSRSIKLEKEPIYSSQLVIP-ISGQLPPKSFLHLYGTERQCPPGFLSSGTEDC 445

Query: 347 IPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNF 406
                A T Q+  G+S S+ ALSLLSAQSQ + NHL GIPMA P   Q  H H +   N 
Sbjct: 446 TGFYPASTVQELPGVSKSNCALSLLSAQSQDLSNHLMGIPMANPPTVQGCHAHYSAVHNS 505

Query: 407 VKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKD 466
            K  G + L K+ + G Y+S MNS++ AQM  +M+PD G+A   +V T+   Q SDF   
Sbjct: 506 DKPIGMSSLEKFASNGSYSSRMNSVEVAQMGPVMLPDGGNAVSFEVRTNRNFQGSDFLNA 565

Query: 467 KNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL 506
           K  +S E+  TVDL+QLSSHLKRVE QRN +  KQ  DD 
Sbjct: 566 KYSHSSEREPTVDLLQLSSHLKRVEWQRNYMHVKQENDDF 605

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541980|ref|XP_002512054.1| LIGULELESS1 protein, putative [Ricinus communis] gi|223549234|gb|EEF50723.1| LIGULELESS1 protein, putative [Ricinus communis]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 269/529 (50%), Positives = 332/529 (62%), Gaps = 51/529 (9%)

Query: 1   MESWIYG-SEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENM 59
           M+SW +  +EGK + +SDE+D S D F RSRKTL  W               D + VENM
Sbjct: 1   MDSWRFTTAEGKSLFFSDEIDVSTDSFGRSRKTLTGW---------------DGESVENM 45

Query: 60  EFMDLCFTDLTRKPCHSNSSLG----TPNGEVGSDTNE---RLTTTPCMVTSNSFCGPES 112
           EF+DL F+++ ++  +  S+ G      +GEV  D +     L++  CM+ SNS    ES
Sbjct: 46  EFIDLGFSEMHKRQFYGTSNTGFGILGSSGEVNFDASSNKIELSSPSCMIASNS--SLES 103

Query: 113 GSKISSSCMKSISQDSA-LIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTT 171
           GS  S+S M++ S DS+ LIDLKLGRL DG+D    K  KERSV SS  P+  AK+ RT 
Sbjct: 104 GSNHSNSVMEANSHDSSSLIDLKLGRLGDGKDVDNSKFLKERSVVSSVTPTFQAKRARTM 163

Query: 172 SSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLA 231
           +S +QTP CQVYGCNKDLSS KDYHKRHKVC+VHSKTPKVIVNG EQRFCQQCSRFHLL 
Sbjct: 164 NSRTQTPFCQVYGCNKDLSSLKDYHKRHKVCEVHSKTPKVIVNGVEQRFCQQCSRFHLLV 223

Query: 232 EFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDM 291
           EFDD KRSCR+RLAGHNERRRKPQF   S R  KLLQ YQG++   TSL    SF++P+M
Sbjct: 224 EFDDGKRSCRKRLAGHNERRRKPQFGALSGRPHKLLQAYQGTKFLGTSLPKRASFLFPNM 283

Query: 292 LPGGILFPERYEPV---KQIKFSERPPYSPQLAVPNTNEQLLTKSSLY-QGNKKQHRLAI 347
            PGGIL+PE YE     + +K  E+  Y        TN QLL KS L+  GN  Q+   I
Sbjct: 284 RPGGILYPEIYEQANCCRPVKLEEKSCY-------GTNSQLLQKSFLHLHGNGIQNTSGI 336

Query: 348 P---------LDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHT 398
                        +    + +G+SHSS ALSLLSA+SQ + +H +GI MARPLISQV  +
Sbjct: 337 SPPASEDFTVFSASSNIHELAGVSHSSCALSLLSAESQDL-SHSAGIIMARPLISQVGRS 395

Query: 399 HLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEV- 457
           H  LG  F   S      KY    F +SGM+S+    M  LM   AGHA + ++E+DE  
Sbjct: 396 HHILG--FSDKSSLGSSEKYVGDIFQSSGMSSLKTNHMGPLMGSCAGHATDGQIESDEYL 453

Query: 458 -SQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDD 505
            +Q  DF  DK C S E G TVDL+QLSSHL RVEQQRNS+Q K   ++
Sbjct: 454 QNQGPDFVSDKFCISAENGTTVDLLQLSSHLHRVEQQRNSMQVKHELEE 502

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738116|emb|CBI27317.3| unnamed protein product [Vitis vinifera]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 255/479 (53%), Positives = 316/479 (65%), Gaps = 15/479 (3%)

Query: 42  YNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCM 101
           +NF+ + L  D D VE+MEFM+L   DL RK   SN S+G  +GE+G ++++R+ +   M
Sbjct: 15  FNFENDGLVLDRDAVESMEFMELDSPDLVRKLLPSNPSVGFLSGEIGRNSSKRIVSPTNM 74

Query: 102 VTSNS-FCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAH 160
           VTSN  F G ES S++SSS M+S SQDS++IDLKLGRL D  D +  +  KE SV SS  
Sbjct: 75  VTSNPIFGGEESSSRLSSSFMESNSQDSSIIDLKLGRLADCIDAKNNRCSKEGSVLSSLA 134

Query: 161 PSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRF 220
            S+ AK+ RTTS CSQTPLCQV+GCN DLSSSKDYHKRHKVCDVHSKTPKVIVNG EQRF
Sbjct: 135 SSMPAKRARTTSVCSQTPLCQVHGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRF 194

Query: 221 CQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSL 280
           CQQCSRFHLLAEFDD KRSCR+RLAGHNERRRKPQ + HS + +KLLQ Y G+ +  TSL
Sbjct: 195 CQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQLDTHSGKPQKLLQSYPGTRILGTSL 254

Query: 281 QNGTSFVYPDMLPGGILFPERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLY- 336
                FV+ D+LPG +  P+ Y    P + IK  + P YS QL +P  + QL  KS L+ 
Sbjct: 255 AKRPPFVFQDILPGSVYCPDGYGQANPSRSIKLEKEPIYSSQLVIP-ISGQLPPKSFLHL 313

Query: 337 QGNKKQ---------HRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPM 387
            G ++Q                  A T Q+  G+S S+ ALSLLSAQSQ + NHL GIPM
Sbjct: 314 YGTERQCPPGFLSSGTEDCTGFYPASTVQELPGVSKSNCALSLLSAQSQDLSNHLMGIPM 373

Query: 388 ARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHA 447
           A P   Q  H H +   N  K  G + L K+ + G Y+S MNS++ AQM  +M+PD G+A
Sbjct: 374 ANPPTVQGCHAHYSAVHNSDKPIGMSSLEKFASNGSYSSRMNSVEVAQMGPVMLPDGGNA 433

Query: 448 FELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL 506
              +V T+   Q SDF   K  +S E+  TVDL+QLSSHLKRVE QRN +  KQ  DD 
Sbjct: 434 VSFEVRTNRNFQGSDFLNAKYSHSSEREPTVDLLQLSSHLKRVEWQRNYMHVKQENDDF 492

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108868|ref|XP_002314996.1| hypothetical protein POPTRDRAFT_769914 [Populus trichocarpa] gi|222864036|gb|EEF01167.1| hypothetical protein POPTRDRAFT_769914 [Populus trichocarpa]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 255/522 (48%), Positives = 317/522 (60%), Gaps = 34/522 (6%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           M+ W Y SEGKG+L+SDE+D S D FTRSRK  +                 D++  E+ E
Sbjct: 28  MDFWSYASEGKGLLFSDEIDLSGDAFTRSRKASIG---------------CDTEAAESAE 72

Query: 61  FMDLCFTDLTRKPCH-SNSSLGTPNGE-VGSDTNERLTTTP-CMVTSNSFCGPESGSKIS 117
            +DL F+++ RKP H S +  G   G  VG D+++ +  +P CM+ SNS    ES S  S
Sbjct: 73  SLDLGFSEIPRKPFHGSKTGAGMFGGSCVGIDSSKLVVGSPNCMIASNS--SMESRSNHS 130

Query: 118 SSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQT 177
           +S M+S SQDS+L DLKLGRL D  D Q  +  KER + SSA P+  AK+    S   + 
Sbjct: 131 NSLMESNSQDSSLFDLKLGRLADCIDAQNSRFSKERFLLSSASPTTQAKRAPMASLRPRI 190

Query: 178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSK 237
             CQVY CNKDLSSSKDYHKRHKVC+VH+KTP+VIVNGNEQRFCQQCSRFHLL EFDD K
Sbjct: 191 SFCQVYDCNKDLSSSKDYHKRHKVCEVHTKTPQVIVNGNEQRFCQQCSRFHLLVEFDDGK 250

Query: 238 RSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGIL 297
           RSCR+RLAGHNERRRKPQF   S +  KLL  +Q ++   TSL   TSF++P+MLPGG  
Sbjct: 251 RSCRKRLAGHNERRRKPQFGTLSVKPHKLLHPFQSTKFLGTSLAKRTSFLFPNMLPGGTF 310

Query: 298 FPERYEP---VKQIKFSERPPYSPQLAVPNTNEQLLTKSSLY-QGNKKQHRLAI-PLD-- 350
            P+ YE     K +K  E   YS   A+P  N QLL +S L+  GN+ Q    I PLD  
Sbjct: 311 CPQSYEEDNWRKHVKLEENSIYSSPSAIPIRNGQLLPRSFLHLHGNRIQKTCGISPLDTE 370

Query: 351 ------TALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQ 404
                 TA T  + +G+SHSS ALSLLSA      +H +G  M RPL+SQ       LG 
Sbjct: 371 DLTISNTATTINELAGVSHSSCALSLLSAAESQDLSHSAGNIMVRPLVSQAGGACQTLGI 430

Query: 405 NFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFF 464
              K+ G     KY   G  + GMN ++   M    V  +GHA +LKVETD     SDF 
Sbjct: 431 A-NKSLGGGSSEKYVPIGINSFGMNFIEVDNMGPFGVSGSGHAADLKVETDGFLHHSDFL 489

Query: 465 KDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL 506
             K+C SP    TVD +QLSSHL+RVEQQRNS++ K   +D 
Sbjct: 490 NAKHCVSPANESTVDWLQLSSHLQRVEQQRNSMKVKHENEDF 531

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502645|ref|XP_003520128.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Glycine max]

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 229/521 (43%), Positives = 298/521 (57%), Gaps = 61/521 (11%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW Y  E KG L+SDE+D S+D F RSRK L+ W++K ++  + +   SD + V +ME
Sbjct: 1   MESWSYVPEEKGYLFSDEMDFSLDAFMRSRKALVEWDNKSNF-VEKDGFNSDREVVRSME 59

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSD-TNERLTTTPCMVTSNSFCGPE-SGSKISS 118
           F+DL F DL +K  H +  L T + E+ S+ +++R  ++P ++  +S  G E S SK  S
Sbjct: 60  FVDLGFPDLLQKSFHGSQPLETSSYELDSNNSSKRGNSSPHVIALDSSMGEEESDSKHLS 119

Query: 119 SCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTP 178
           S ++S + DS+LIDLKLGRL D +     K+ KE    +S HP+ + K+ RT+S  +Q P
Sbjct: 120 SLVESKTHDSSLIDLKLGRLADCKGASSDKVAKEGFTLTSIHPTTLWKRARTSSLPAQAP 179

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
           +CQVYGCN DLSSSKDYHKRHKVCD HSKT KVIVNG EQRFCQQCSRFHLLAEFDD KR
Sbjct: 180 VCQVYGCNMDLSSSKDYHKRHKVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKR 239

Query: 239 SCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILF 298
           SCRRRLAGHNERRRKPQF+  + +  K+LQ YQG++   +SLQN   F + D+    ILF
Sbjct: 240 SCRRRLAGHNERRRKPQFDYVTGKQHKILQSYQGTKYLGSSLQNKPQFPFQDIFQSSILF 299

Query: 299 PERYEPVKQ---IKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTF 355
           P ++    Q   +K  E   Y  QLA P T +Q                           
Sbjct: 300 PGKHAQFSQSGRVKLEEDSIYGSQLAAPVTLDQ--------------------------- 332

Query: 356 QDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLI----------SQVSHTHLNLGQN 405
                   SS ALSLLS QSQ    H +G P+A P +          S+VS   L +   
Sbjct: 333 ------ESSSCALSLLSDQSQYPSCHAAGNPLASPQVFSGIRIPDRDSRVSKKPLRI--- 383

Query: 406 FVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMV-PDAGHAFELKVETDEVSQESDFF 464
                  +P  K      +     S +  + RS       GHA E+    D++ Q S+ F
Sbjct: 384 -------SPADKLAPNESFPCDTISKEVIKNRSAATFSSVGHALEVH-NGDDICQPSELF 435

Query: 465 KDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDD 505
             K+  S E   TVDL QLSSHL+RVEQQRNS+  K   +D
Sbjct: 436 SIKHSLSSEHAATVDLFQLSSHLQRVEQQRNSVLVKWENED 476

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498035|ref|XP_003517860.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Glycine max]

 Score =  347 bits (890), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 217/516 (42%), Positives = 294/516 (56%), Gaps = 51/516 (9%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW Y  E KG L+SDE++ S+D F RSRK L+ W++K ++  + +   SD + V++ME
Sbjct: 1   MESWSYVPEEKGYLFSDEMEFSLDAFMRSRKALVEWDNKSNF-VERDGFNSDREVVKSME 59

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERL--TTTPCMVTSNSFCGPESGSKISS 118
           F+DL F DL +K  H +  L T + E+ S+ + +   ++T  +   +S    ES SK  S
Sbjct: 60  FVDLGFPDLLQKSFHGSLPLETSSYELDSNNSSKRGNSSTHVIALDSSMGEEESNSKHLS 119

Query: 119 SCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTP 178
           S ++S +QDS+LIDLKLGRL D +     K+ KE    +S HP+ ++K+ RT+S  +Q P
Sbjct: 120 SLVESKTQDSSLIDLKLGRLADCKGASSDKVEKEGFTLTSIHPTTLSKRARTSSLPAQAP 179

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
           +CQVYGCN DLSSSKDYHKRHKVCD HSKT KVIVNG EQRFCQQCSRFHLL EFDD KR
Sbjct: 180 VCQVYGCNMDLSSSKDYHKRHKVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKR 239

Query: 239 SCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILF 298
           SCRRRLAGHNERRRKPQF+  + +  K+LQ YQG++   +SLQN   F + D+    ILF
Sbjct: 240 SCRRRLAGHNERRRKPQFDYMTGKQHKILQSYQGTKYLGSSLQNKPMFPFQDIFQSSILF 299

Query: 299 PERYEPVKQ---IKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKK-----QHRLAIPLD 350
           P ++  + Q   +K  E   YS QL  P T +Q  +  +L   + +      H    PL 
Sbjct: 300 PGKHAQISQSGRVKLEEDSIYSSQLTAPITLDQESSSCALSLLSDQSQYLSHHAACNPLT 359

Query: 351 TALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTS 410
           +   F   SGI                +PN             Q+S T L +        
Sbjct: 360 SHRVF---SGIC---------------IPNR----------DGQISETPLRI-------- 383

Query: 411 GTTPLGKYETKGFYTSGMNSMDGAQMRSLMV-PDAGHAFELKVETDEVSQESDFFKDKNC 469
             +   K+     +     S +  + RS     + GHA  +    D++ Q S+    K+ 
Sbjct: 384 --SSADKHAPNESFPCNTTSKEVIKNRSAATFSNTGHALRVH-HGDDICQPSELLDVKHH 440

Query: 470 YSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDD 505
           +S E   TVDL QLSSHL+RVEQQRNS+  K   +D
Sbjct: 441 FSSEHAATVDLFQLSSHLQRVEQQRNSVLVKWENED 476

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456548|ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis vinifera]

 Score =  334 bits (856), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 245/558 (43%), Positives = 299/558 (53%), Gaps = 62/558 (11%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           M SW Y S+ K  + SD  D   +   RS+   M WE K    +  + L S    ++N  
Sbjct: 1   MGSWSYVSQEKEFV-SDATDLQPNSSARSKNVFMGWELKTPCGYGNSILVSSQQVIQNQG 59

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFC-GPESGSKISSS 119
           F +    ++ RK    NS      G+ G    + +     MV+ N F    ES SK+SSS
Sbjct: 60  FGEFGIPEMVRKQLPDNSIRDVSCGKGG----DGIMVNSIMVSPNVFPRDDESSSKLSSS 115

Query: 120 CMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPL 179
            M+S SQDS LIDLKLGR  D  D Q  K  K      SA  S  AK+VR     SQT  
Sbjct: 116 VMESNSQDSLLIDLKLGRFADHSDSQNCKPSKANPSLPSAESSTPAKRVRAVGLNSQTAF 175

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQV+GCNKDLSSSKDYHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLLAEFDD KRS
Sbjct: 176 CQVHGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 235

Query: 240 CRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQ---GSELPWTSLQNGTSFVYPDMLPGGI 296
           CR+RLAGHNERRRKPQ  IH  R+ +LLQ Y    G+    T+L    SF+  D+LP G+
Sbjct: 236 CRKRLAGHNERRRKPQVGIHPGRAGRLLQSYNGYAGNRFQGTTLTT-ASFICQDILPSGL 294

Query: 297 LFPERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKS-----------SLYQGNKK- 341
           L PE+Y   +  K+IK  +   YSPQ  +P TN     KS           S +Q N   
Sbjct: 295 LPPEKYGMSDWCKRIKVEDGTDYSPQSTIPITNGHPHPKSLFPTFEFEKQYSSFQDNGAN 354

Query: 342 ------QHRLAIPLDTALT-------FQDS-------------------SGISHSSGALS 369
                 +H    P D A         FQD+                   SGIS S  ALS
Sbjct: 355 TGSIFSEHNSRYPHDLADANSGPHSFFQDTSLGNEDLSVFDAGSTVQALSGISDSGRALS 414

Query: 370 LLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTP---LGKYETKGFYTS 426
           LLS+QSQ+  +H SGIPM  PLI    H H N+ Q   K  G +P   + +   K F +S
Sbjct: 415 LLSSQSQNSSSHSSGIPMIHPLIMPGCHAHYNIAQVSEKFLGVSPQVSMSRVPNK-FLSS 473

Query: 427 GMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSH 486
           GMNS +G  +  +++ D       +V TD + Q SDF   K+C   E G T+DL+QLSS 
Sbjct: 474 GMNSAEGNHLGPILISDCSEPVNFEV-TDGIFQGSDFVNTKDCLPCETGPTIDLLQLSSQ 532

Query: 487 LKRVEQQRNSIQPKQHTD 504
           L RVE QR SI  KQ  D
Sbjct: 533 LHRVEHQRQSIHVKQEND 550

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441121|ref|XP_004138332.1| PREDICTED: uncharacterized protein LOC101221286 [Cucumis sativus]

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 222/556 (39%), Positives = 306/556 (55%), Gaps = 66/556 (11%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW Y SEGKG + SDE++S      R++ +L+ WE K   +F  + +   S  V+N  
Sbjct: 1   MESWSYVSEGKGCM-SDEMNSPTSSLARNKDSLLGWEFKNPCSFG-STMLPTSQQVDNQG 58

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGP-ESGSKISSS 119
           F +L F ++  K    NS     + +V      R    P M +S +F G  ES SK+SSS
Sbjct: 59  FGELVFPEMIGKQLPDNSVCDILSSKV---VGGRFLN-PAMNSSIAFLGEDESTSKLSSS 114

Query: 120 CMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPL 179
            + S S+DS+ IDLKLGR  D RD    K FK   + SS+  S+ +K+VR +   SQT  
Sbjct: 115 IVDSSSRDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYF 174

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQVYGCNKDLSS KDYHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLLAEFDD KRS
Sbjct: 175 CQVYGCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 234

Query: 240 CRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFP 299
           CR+RLAGHNERRRKPQ  I+S R+ + LQ Y GS L  T+L   TSF+  ++LP G+L P
Sbjct: 235 CRKRLAGHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTAL-TATSFICQEILPNGLLHP 293

Query: 300 ERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKS----------------------- 333
           E+Y   +  + +K  ++  Y P  AV   +  L +KS                       
Sbjct: 294 EKYGTSDWCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASA 353

Query: 334 -SLYQGNKKQHRLAI---------------------PLDTALTFQDSSGISHSSGALSLL 371
            ++++ N  Q+ L++                      + +A +    SG+S S  ALSLL
Sbjct: 354 TNIFKENSNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLL 413

Query: 372 SAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQ--NFVKTSGTTPLGKYETKGFYTSGMN 429
           S+Q+Q+   H SGIP+ RPL+      H ++ Q    +    +       +  F +SG+N
Sbjct: 414 SSQTQNSSTHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGLN 473

Query: 430 SMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSP-EQGFTVDLIQLSSHLK 488
           + +G  +  +  P+   A   ++        +  F   N   P E G T+DL+QLSS L+
Sbjct: 474 TSEGCTLGPISTPETSDAVNFEI-------SNRIFHGSNLADPGEGGPTIDLLQLSSQLQ 526

Query: 489 RVEQQRNSIQPKQHTD 504
           RVE QR ++Q KQ ++
Sbjct: 527 RVEHQRQAMQVKQESN 542

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522424|ref|XP_004168226.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Cucumis sativus]

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 219/548 (39%), Positives = 287/548 (52%), Gaps = 108/548 (19%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW Y SEGKG + SDE++S      R++ +L+ WE K   +F  + +   S  V+N  
Sbjct: 1   MESWSYVSEGKGCM-SDEMNSPTSSLARNKDSLLGWEFKNPCSFG-STMLPTSQQVDNQG 58

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGP-ESGSKISSS 119
           F +L F ++  K    NS     + +V      R    P M +S +F G  ES SK+SSS
Sbjct: 59  FGELVFPEMIGKQLPDNSVCDILSSKV---VGGRFLN-PAMNSSIAFLGEDESTSKLSSS 114

Query: 120 CMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPL 179
            + S S+DS+ IDLKLGR  D RD    K FK   + SS+  S+ +K+VR +   SQT  
Sbjct: 115 IVDSSSRDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYF 174

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQVYGCNKDLSS KDYHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLLAEFDD KRS
Sbjct: 175 CQVYGCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 234

Query: 240 CRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYPDMLPGGILFP 299
           CR+RLAGHNERRRKPQ  I+S R+ + LQ Y GS L  T+L   TSF+  ++LP G+L P
Sbjct: 235 CRKRLAGHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTAL-TATSFICQEILPNGLLHP 293

Query: 300 ERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKS----------------------- 333
           E+Y   +  + +K  ++  Y P  AV   +  L +KS                       
Sbjct: 294 EKYGTSDWCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASA 353

Query: 334 -SLYQGNKKQHRLAI---------------------PLDTALTFQDSSGISHSSGALSLL 371
            ++++ N  Q+ L++                      + +A +    SG+S S  ALSLL
Sbjct: 354 TNIFKENSNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLL 413

Query: 372 SAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSM 431
           S+Q+Q+   H SGIP+ RPL+       L  GQN    S                     
Sbjct: 414 SSQTQNSSTHSSGIPIGRPLV-------LLDGQNHYSMS--------------------- 445

Query: 432 DGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSP-EQGFTVDLIQLSSHLKRV 490
                                +  E S E   F   N   P E G T+DL+QLSS L+RV
Sbjct: 446 ---------------------QLSESSWE--IFHGSNLADPGEGGPTIDLLQLSSQLQRV 482

Query: 491 EQQRNSIQ 498
           E QR ++Q
Sbjct: 483 EHQRQAMQ 490

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547135|ref|XP_002514625.1| LIGULELESS1 protein, putative [Ricinus communis] gi|223546229|gb|EEF47731.1| LIGULELESS1 protein, putative [Ricinus communis]

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 228/560 (40%), Positives = 306/560 (54%), Gaps = 67/560 (11%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNF-DINKLFSDSDDVENM 59
           M+SW Y S GKG + S+E  SS D   +S+  LM W+ K +  F + N + +    +EN 
Sbjct: 1   MQSWNYVSGGKGFV-SNETASSSDSIAKSKNVLMGWDLKTACGFGNNNVVVAGQQAIENH 59

Query: 60  EFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSF-CGPESGSKISS 118
            F +L + +L  K    NS        + S+ +   +    MV  N F    ES S++S 
Sbjct: 60  CFGELNYQELMGKQLPDNS----IRNALSSEADGGKSINHFMVNMNVFSLEHESTSRLSR 115

Query: 119 SCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTP 178
           + ++S S+DS+ IDLKLGR  D  +    ++ K  SV SS+  S   K++R   + S   
Sbjct: 116 TVVESNSRDSSFIDLKLGRFGDPTEGHNSRISKGASVMSSSESSTPPKRLRVGVN-SHPA 174

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
            CQVYGCNKDLSSSK+YHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLLAEFDD KR
Sbjct: 175 HCQVYGCNKDLSSSKEYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKR 234

Query: 239 SCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQG---SELPWTSLQNGTSFVYPDMLPGG 295
           SCR+RLAGHNERRRKPQ   HS R+ KLLQ Y G   S    T+L   TSF+  D+LPGG
Sbjct: 235 SCRKRLAGHNERRRKPQVGPHSGRTGKLLQSYNGIDTSRFHGTAL---TSFICQDILPGG 291

Query: 296 ILFPERY----------------EPVKQIKFSERPPYSPQLAVPNTNEQLL--------- 330
            + P+RY                 P+  I  S   P+S  L   N  +++          
Sbjct: 292 PMHPKRYGTDNWCRQIKVEDGYFNPLSSIPVSSGHPHSKSLFPSNNLDKVFLACHGNEAT 351

Query: 331 --TKSSLYQG-NKKQHRLAI--------------------PLDTALTFQDSSGISHSSGA 367
             T S+L +  N+  H L                        D A   Q  SGI++S  A
Sbjct: 352 TATGSTLSESTNRYPHDLGGSISSSQSLIQDASLGQADFSAFDAASNVQGVSGITNSGSA 411

Query: 368 LSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQ---NFVKTSGTTPLGKYETKGFY 424
           LSLLS+QS ++ +H SGI MA PL+     +H ++ Q     V  S     G  + K F 
Sbjct: 412 LSLLSSQSHNLSSHSSGISMACPLVLPGRSSHYSVSQVSEKLVGISSQASAGAMQNK-FS 470

Query: 425 TSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLS 484
           +SG +S +G+++ S+++ D   A    V  D + Q S+F   K+C S E G T+DL+QLS
Sbjct: 471 SSGTSSAEGSRLGSILLSDGSDAINF-VIADGMYQGSNFMNAKDCLSCEDGTTIDLLQLS 529

Query: 485 SHLKRVEQQRNSIQPKQHTD 504
           S L+RVE+Q+ S+Q KQ  D
Sbjct: 530 SQLERVERQKQSMQVKQEND 549

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	506
TAIR|locus:2026428	405	AT1G69170 [Arabidopsis thalian	0.328	0.409	0.539	3e-55
TAIR|locus:2159717	359	SPL13A "SQUAMOSA PROMOTER-BIND	0.304	0.428	0.488	2e-33
TAIR|locus:2832472	359	SPL13B "SQUAMOSA PROMOTER-BIND	0.304	0.428	0.488	2e-33
TAIR|locus:2016014	396	SPL10 "squamosa promoter bindi	0.239	0.305	0.527	1.1e-32
TAIR|locus:2169248	419	SPL2 "squamosa promoter bindin	0.189	0.229	0.626	6.9e-31
TAIR|locus:2015999	393	SPL11 "squamosa promoter-like	0.288	0.371	0.453	3e-30
TAIR|locus:2059974	375	SPL9 "squamosa promoter bindin	0.195	0.264	0.643	1e-29
TAIR|locus:2095793	354	SPL15 "squamosa promoter bindi	0.215	0.307	0.577	2.2e-28
TAIR|locus:2037355	1035	SPL14 "squamosa promoter bindi	0.173	0.085	0.681	1.6e-27
TAIR|locus:2057656	131	SPL3 "squamosa promoter bindin	0.173	0.671	0.613	2.6e-27

TAIR|locus:2026428 AT1G69170 [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
 Identities = 95/176 (53%), Positives = 116/176 (65%)

Query:   157 SSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGN 216
             SS   +L +KK R ++ CSQ PLCQVYGC+KDLSSSKDYHKRH+VC+ HSKT  VIVNG 
Sbjct:   101 SSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGL 160

Query:   217 EQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELP 276
             EQRFCQQCSRFH L+EFDD KRSCRRRLAGHNERRRKP F     +  KLL+  Q  ++ 
Sbjct:   161 EQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKPAFYFLPGKRHKLLRTSQ--DVV 218

Query:   277 WTSLQNGTSFVYPDMLPGGILF----PERYEPVKQIKFSERPPYSPQLAVPNTNEQ 328
                    +S V P+  PG +L+     + +   + + F + P  S     P TNEQ
Sbjct:   219 GNKFLENSSLVLPESFPGSLLYRVIDEDDHRTSRLVSFKDEPTCS---MFP-TNEQ 270

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2159717 SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 82/168 (48%), Positives = 104/168 (61%)

Query:   132 DLKLGRLVD------GRDKQCGKL--FKERSVAS-SAHPSLMAKKVRTTS-SCSQTPLCQ 181
             DLKLGR +       G  +Q   L  +K+ ++A      S  +K+ R      +Q P+C 
Sbjct:    43 DLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICL 102

Query:   182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
             V GC+ D S+ ++YHKRHKVCDVHSKTP V +NG++QRFCQQCSRFH L EFD+ KRSCR
Sbjct:   103 VDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCR 162

Query:   242 RRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYP 289
             +RL GHN RRRKPQ   H  R       +QGS+L   S   G S V+P
Sbjct:   163 KRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKLLEFS---GGSHVFP 206

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2832472 SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 82/168 (48%), Positives = 104/168 (61%)

Query:   132 DLKLGRLVD------GRDKQCGKL--FKERSVAS-SAHPSLMAKKVRTTS-SCSQTPLCQ 181
             DLKLGR +       G  +Q   L  +K+ ++A      S  +K+ R      +Q P+C 
Sbjct:    43 DLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICL 102

Query:   182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
             V GC+ D S+ ++YHKRHKVCDVHSKTP V +NG++QRFCQQCSRFH L EFD+ KRSCR
Sbjct:   103 VDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCR 162

Query:   242 RRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPWTSLQNGTSFVYP 289
             +RL GHN RRRKPQ   H  R       +QGS+L   S   G S V+P
Sbjct:   163 KRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKLLEFS---GGSHVFP 206

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2016014 SPL10 "squamosa promoter binding protein-like 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 67/127 (52%), Positives = 89/127 (70%)

Query:   161 PSLMAKKVRTTSSCSQT---PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNE 217
             PS++A+K   T SC Q+   P CQ+ GC  DLSSSKDYH++H+VC+ HSK PKV+V+G E
Sbjct:   156 PSVVARK--KTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLE 213

Query:   218 QRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRKLLQLYQGSELPW 277
             +RFCQQCSRFH ++EFD+ KRSCR+RL+ HN RRRKPQ  +    S ++    Q + + W
Sbjct:   214 RRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVFDRRQHTSMLW 272

Query:   278 TSLQNGT 284
               L   T
Sbjct:   273 NGLSLNT 279

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010358 "leaf shaping" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2169248 SPL2 "squamosa promoter binding protein-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 62/99 (62%), Positives = 77/99 (77%)

Query:   156 ASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNG 215
             +SS  P    KK ++     QTP CQV GCN DLSS+KDYH++H++C+ HSK PKV+V+G
Sbjct:   148 SSSVSP---VKKSKSIPQRLQTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSG 204

Query:   216 NEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKP 254
              E+RFCQQCSRFH L+EFD+ KRSCRRRL+ HN RRRKP
Sbjct:   205 VERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRRKP 243

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:2015999 SPL11 "squamosa promoter-like 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 68/150 (45%), Positives = 93/150 (62%)

Query:   133 LKLGRLVDGRDKQCGKLFKERSVASSA--HPSLMAKKVRTTSSCSQTPLCQVYGCNKDLS 190
             LKLG+     ++  G+   E S  S     PS++A K +        P CQ+ GC  DLS
Sbjct:   127 LKLGKRTYS-EEYWGRNNNEISAVSMKLLTPSVVAGKSKLCGQSMPVPRCQIDGCELDLS 185

Query:   191 SSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNER 250
             S+K YH++HKVC+ HSK PKV V+G E+RFCQQCSRFH ++EFD+ KRSCR+RL+ HN R
Sbjct:   186 SAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNAR 245

Query:   251 RRKPQFNIHSDRSRKLLQLYQGSELPWTSL 280
             RRKPQ  + S    ++    Q + + W  +
Sbjct:   246 RRKPQ-GVFSMNPERVYDRRQHTNMLWNGV 274

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2059974 SPL9 "squamosa promoter binding protein-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 65/101 (64%), Positives = 73/101 (72%)

Query:   157 SSAHPSLMAKKVRTTSS--CSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVN 214
             SS+      ++VR   S    Q P CQV GC  DL+++K Y+ RH+VC VHSKTPKV V 
Sbjct:    49 SSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVA 108

Query:   215 GNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ 255
             G EQRFCQQCSRFH L EFD  KRSCRRRLAGHNERRRKPQ
Sbjct:   109 GIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQ 149

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI

GO:0048366 "leaf development" evidence=IMP;IDA

GO:2000025 "regulation of leaf formation" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:2095793 SPL15 "squamosa promoter binding protein-like 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 2.2e-28, P = 2.2e-28
 Identities = 63/109 (57%), Positives = 72/109 (66%)

Query:   147 GKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHS 206
             G  F ++        S    +V T    S T  CQV GC  DLS+ K Y+ RHKVC +HS
Sbjct:    26 GLRFGQKIYFEDGSGSRSKNRVNTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHS 85

Query:   207 KTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ 255
             K+ KVIV+G  QRFCQQCSRFH L+EFD  KRSCRRRLA HNERRRKPQ
Sbjct:    86 KSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKRSCRRRLACHNERRRKPQ 134

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI

GO:0008361 "regulation of cell size" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0048653 "anther development" evidence=IGI

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2037355 SPL14 "squamosa promoter binding protein-like 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
 Identities = 60/88 (68%), Positives = 69/88 (78%)

Query:   166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
             KKVR+ S     P+CQV  C +DLS +KDYH+RHKVC+VHSK  K +V    QRFCQQCS
Sbjct:   106 KKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCS 165

Query:   226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
             RFHLL+EFD+ KRSCRRRLAGHN RRRK
Sbjct:   166 RFHLLSEFDEGKRSCRRRLAGHNRRRRK 193

GO:0003677 "DNA binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2057656 SPL3 "squamosa promoter binding protein-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 2.6e-27, P = 2.6e-27
 Identities = 54/88 (61%), Positives = 67/88 (76%)

Query:   166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
             +K +   + S + +CQV  C  D+S +K YHKRHKVC  H+K P V ++G  QRFCQQCS
Sbjct:    40 EKKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCS 99

Query:   226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
             RFH L+EFD++KRSCRRRLAGHNERRRK
Sbjct:   100 RFHALSEFDEAKRSCRRRLAGHNERRRK 127

GO:0003677 "DNA binding" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS

GO:0010321 "regulation of vegetative phase change" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0009886 "post-embryonic morphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

GO:0009908 "flower development" evidence=TAS

GO:0009911 "positive regulation of flower development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_X001404 hypothetical protein (600 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	506
pfam03110	79	pfam03110, SBP, SBP domain	5e-51

>gnl|CDD|190527 pfam03110, SBP, SBP domain

 Score =  167 bits (426), Expect = 5e-51
 Identities = 61/77 (79%), Positives = 69/77 (89%)

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
            CQV GC  DLS++KDYH+RHKVC+VHSK P V+V+G EQRFCQQCSRFHLL+EFD+ KR
Sbjct: 1   RCQVEGCGADLSNAKDYHRRHKVCEVHSKAPVVLVSGLEQRFCQQCSRFHLLSEFDEGKR 60

Query: 239 SCRRRLAGHNERRRKPQ 255
           SCRRRLAGHNERRRKPQ
Sbjct: 61  SCRRRLAGHNERRRKPQ 77

SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands. Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	506
PF03110	79	SBP: SBP domain; InterPro: IPR004333 The SBP plant	100.0

>PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain []

Probab=100.00  E-value=3.8e-38  Score=262.14  Aligned_cols=78  Identities=64%  Similarity=1.145  Sum_probs=63.2

Q ss_pred             ccccCCCcccccCCcchhccccccccccCCCeEEECCeeehhhhhhcccccccccccchhHHHHHHhhhhhhhcCCCC
Q 010591          179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQF  256 (506)
Q Consensus       179 ~CQV~GC~~dLs~~k~YhrRhrVCe~H~kA~~V~v~G~~qRFCQQCsrFH~L~eFDg~kRSCR~rL~~hn~RRRk~q~  256 (506)
                      +||||||++||+.+|.||+||||||.|++||+|+++|.++||||||+|||+|+||||+|||||++|++||+||||+++
T Consensus         1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~   78 (79)
T PF03110_consen    1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ   78 (79)
T ss_dssp             C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred             CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999999875

Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	506
1ul4_A	94	Solution Structure Of The Dna-Binding Domain Of Squ		3e-25
1ul5_A	88	Solution Structure Of The Dna-binding Domain Of Squ		1e-18
1wj0_A	60	Solution Structure Of The Dna-Binding Domain Of Squ		4e-17

>pdb|1UL4|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 Length = 94

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 63/83 (75%)
Query: 171 TSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLL 230
           +S  S   LCQV  C  D+  +K YH+RHKVC+VH+K   V ++G  QRFCQQCSRFH L
Sbjct: 2   SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDL 61
Query: 231 AEFDDSKRSCRRRLAGHNERRRK 253
            EFD++KRSCRRRLAGHNERRRK
Sbjct: 62  QEFDEAKRSCRRRLAGHNERRRK 84

>pdb|1UL5|A Chain A, Solution Structure Of The Dna-binding Domain Of Squamosa Promoter Binding Protein-like 7 Length = 88

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQV  C  D+S  K YHKRH+VC   +    V+++G  +R+CQQC +FHLL +FD+ KRS
Sbjct: 6   CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRS 65
Query: 240 CRRRLAGHNERR-RKP 254
           CRR+L  HN RR RKP
Sbjct: 66  CRRKLERHNNRRKRKP 81

>pdb|1WJ0|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 12 Lacking The Second Zinc- Binding Site Length = 60

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD 234
           CQV  C  DLS  KDYH+RHKVC++HSK    +V G  QRFCQQCSRFH+L EFD
Sbjct: 6   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	506
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	1e-38
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	2e-37
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	4e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 94

 Score =  134 bits (339), Expect = 1e-38
 Identities = 53/85 (62%), Positives = 63/85 (74%)

Query: 171 TSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLL 230
           +S  S   LCQV  C  D+  +K YH+RHKVC+VH+K   V ++G  QRFCQQCSRFH L
Sbjct: 2   SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDL 61

Query: 231 AEFDDSKRSCRRRLAGHNERRRKPQ 255
            EFD++KRSCRRRLAGHNERRRK  
Sbjct: 62  QEFDEAKRSCRRRLAGHNERRRKSS 86

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 88

 Score =  132 bits (332), Expect = 2e-37
 Identities = 38/80 (47%), Positives = 52/80 (65%)

Query: 176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDD 235
               CQV  C  D+S  K YHKRH+VC   +    V+++G  +R+CQQC +FHLL +FD+
Sbjct: 2   SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDE 61

Query: 236 SKRSCRRRLAGHNERRRKPQ 255
            KRSCRR+L  HN RR++  
Sbjct: 62  GKRSCRRKLERHNNRRKRKP 81

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 60

 Score =  113 bits (284), Expect = 4e-31
 Identities = 36/58 (62%), Positives = 41/58 (70%)

Query: 177 TPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD 234
              CQV  C  DLS  KDYH+RHKVC++HSK    +V G  QRFCQQCSRFH+L EFD
Sbjct: 3   AICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.8 bits (149), Expect = 3e-10
 Identities = 84/602 (13%), Positives = 169/602 (28%), Gaps = 201/602 (33%)

Query: 11  KGILYSDEVDSSV---DPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFT 67
           K IL  +E+D  +   D  + + +      SK     ++ + F +     N +F+     
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE---EMVQKFVEEVLRINYKFLMSPIK 99

Query: 68  DLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPESGSKISSSCMKSISQD 127
              R+P        +    +  +  +RL     +    +    +   K+           
Sbjct: 100 TEQRQP--------SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR---------- 141

Query: 128 SALIDLKLGR--LVDGRDKQCGKLFKERSV-ASSAHPSLMAKKVRT---------TSSCS 175
            AL++L+  +  L+DG     GK     +  A       ++ KV+               
Sbjct: 142 QALLELRPAKNVLIDG-VLGSGK-----TWVALDV---CLSYKVQCKMDFKIFWLNLKNC 192

Query: 176 QTP---------LCQVYGCN------------KDLSSSKDY------HKRHKVC-----D 203
            +P         L      N              + S +         K ++ C     +
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 204 VHSKTPKVIVNGNEQRFCQQC-----SRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNI 258
           V  +  K         F   C     +RF  + +F  +  +    L  H+         +
Sbjct: 253 V--QNAKAW-----NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM-------TL 298

Query: 259 HSDRSRKLLQLYQG---SELPWTSLQNGTSFV---YPDMLPGGILFPERYEPVKQIKFSE 312
             D  + LL  Y      +LP   +            + +  G+   + ++ V   K + 
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLP-REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 313 --------------RPPYSPQLAV--PNTN--EQLLT-------------------KSSL 335
                         R  +  +L+V  P+ +    LL+                   K SL
Sbjct: 358 IIESSLNVLEPAEYRKMFD-RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416

Query: 336 YQGNKKQHRLAIP---LDTALTFQDSSGISHSS-----GALSLLSAQSQSMPN------- 380
            +   K+  ++IP   L+  +  ++   + H S            +     P        
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYAL-HRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 381 ----HLSGIPMARPLISQVSHTHLNLG--QNFVKTSGTTP------------LGKYETKG 422
               HL  I      ++      L+    +  ++   T              L  Y  K 
Sbjct: 476 HIGHHLKNIEHPE-RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY--KP 532

Query: 423 FYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQ 482
           +        D       +V      F  K+E              N    +  +T DL++
Sbjct: 533 YIC------DNDPKYERLVNAILD-FLPKIEE-------------NLICSK--YT-DLLR 569

Query: 483 LS 484
           ++
Sbjct: 570 IA 571

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	506
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	100.0
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	100.0
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	99.96

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=1.9e-41  Score=288.53  Aligned_cols=88  Identities=59%  Similarity=1.006  Sum_probs=80.4

Q ss_pred             CCCCCCccccCCCcccccCCcchhccccccccccCCCeEEECCeeehhhhhhcccccccccccchhHHHHHHhhhhhhhc
Q 010591          173 SCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRR  252 (506)
Q Consensus       173 ~~~~~~~CQV~GC~~dLs~~k~YhrRhrVCe~H~kA~~V~v~G~~qRFCQQCsrFH~L~eFDg~kRSCR~rL~~hn~RRR  252 (506)
                      .+++.++|||+||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||++|||||+||++||+|||
T Consensus         4 ~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~RRR   83 (94)
T 1ul4_A            4 GSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRR   83 (94)
T ss_dssp             ----CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCC
T ss_pred             CCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHHhc
Confidence            34578999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC
Q 010591          253 KPQFNIHS  260 (506)
Q Consensus       253 k~q~~~~~  260 (506)
                      |++++.+.
T Consensus        84 k~~~~~~~   91 (94)
T 1ul4_A           84 KSSGESGP   91 (94)
T ss_dssp             SCCCC---
T ss_pred             cCCCCcCC
Confidence            99998753

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=3.3e-40  Score=278.08  Aligned_cols=83  Identities=46%  Similarity=0.943  Sum_probs=78.9

Q ss_pred             CCCccccCCCcccccCCcchhccccccccccCCCeEEECCeeehhhhhhcccccccccccchhHHHHHHhhhhhhhcCCC
Q 010591          176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ  255 (506)
Q Consensus       176 ~~~~CQV~GC~~dLs~~k~YhrRhrVCe~H~kA~~V~v~G~~qRFCQQCsrFH~L~eFDg~kRSCR~rL~~hn~RRRk~q  255 (506)
                      ..++|||+||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++
T Consensus         2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~   81 (88)
T 1ul5_A            2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP   81 (88)
T ss_dssp             -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred             CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999988776


Q ss_pred             CCC
Q 010591          256 FNI  258 (506)
Q Consensus       256 ~~~  258 (506)
                      .+.
T Consensus        82 ~~~   84 (88)
T 1ul5_A           82 VDK   84 (88)
T ss_dssp             CSS
T ss_pred             ccC
Confidence            664

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=99.96  E-value=4.4e-31  Score=209.11  Aligned_cols=59  Identities=61%  Similarity=1.111  Sum_probs=57.2

Q ss_pred             CCCccccCCCcccccCCcchhccccccccccCCCeEEECCeeehhhhhhcccccccccc
Q 010591          176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD  234 (506)
Q Consensus       176 ~~~~CQV~GC~~dLs~~k~YhrRhrVCe~H~kA~~V~v~G~~qRFCQQCsrFH~L~eFD  234 (506)
                      +.++|||+||++||+.+|+|||||||||.|+|||+|+|+|+++||||||+|||+|+|||
T Consensus         2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD   60 (60)
T 1wj0_A            2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   60 (60)
T ss_dssp             -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence            46899999999999999999999999999999999999999999999999999999998

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	506
d1ul5a_	86	g.72.1.1 (A:) Squamosa promoter binding protein-li	2e-43
d1ul4a_	81	g.72.1.1 (A:) Squamosa promoter binding protein-li	1e-42
d1wj0a_	58	g.72.1.1 (A:) Squamosa-promoter binding-like prote	1e-29

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  146 bits (369), Expect = 2e-43
 Identities = 38/78 (48%), Positives = 52/78 (66%)

Query: 178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSK 237
             CQV  C  D+S  K YHKRH+VC   +    V+++G  +R+CQQC +FHLL +FD+ K
Sbjct: 2   ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGK 61

Query: 238 RSCRRRLAGHNERRRKPQ 255
           RSCRR+L  HN RR++  
Sbjct: 62  RSCRRKLERHNNRRKRKP 79

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 81

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  144 bits (365), Expect = 1e-42
 Identities = 51/78 (65%), Positives = 60/78 (76%)

Query: 178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSK 237
            LCQV  C  D+  +K YH+RHKVC+VH+K   V ++G  QRFCQQCSRFH L EFD++K
Sbjct: 2   RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAK 61

Query: 238 RSCRRRLAGHNERRRKPQ 255
           RSCRRRLAGHNERRRK  
Sbjct: 62  RSCRRRLAGHNERRRKSS 79

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 58

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  108 bits (271), Expect = 1e-29
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD 234
           CQV  C  DLS  KDYH+RHKVC++HSK    +V G  QRFCQQCSRFH+L EFD
Sbjct: 4   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	506
d1ul5a_	86	Squamosa promoter binding protein-like 7, DNA-bind	100.0
d1ul4a_	81	Squamosa promoter binding protein-like 4, DNA-bind	100.0
d1wj0a_	58	Squamosa-promoter binding-like protein 12, DNA-bin	99.96

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7e-41  Score=279.01  Aligned_cols=84  Identities=45%  Similarity=0.927  Sum_probs=81.3

Q ss_pred             CCccccCCCcccccCCcchhccccccccccCCCeEEECCeeehhhhhhcccccccccccchhHHHHHHhhhhhhhcCCCC
Q 010591          177 TPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQF  256 (506)
Q Consensus       177 ~~~CQV~GC~~dLs~~k~YhrRhrVCe~H~kA~~V~v~G~~qRFCQQCsrFH~L~eFDg~kRSCR~rL~~hn~RRRk~q~  256 (506)
                      .++|||+||++||+.+|+||+||||||.|+|||.|+|+|+++||||||+|||+|+|||++|||||+||++||+||||+++
T Consensus         1 ~~rCqV~gC~~dls~~k~Y~rRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~   80 (86)
T d1ul5a_           1 VARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPV   80 (86)
T ss_dssp             CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSC
T ss_pred             CCeeeeCCCcchhhhCHHhhhhhHHHHHhcCCCeEEECCeechHHHHhccccChhhhccccccHHHHHHHHHHHhccCCc
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 010591          257 NIHS  260 (506)
Q Consensus       257 ~~~~  260 (506)
                      +.++
T Consensus        81 ~~~g   84 (86)
T d1ul5a_          81 DKGG   84 (86)
T ss_dssp             SSCC
T ss_pred             cccc
Confidence            8754

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-40  Score=274.76  Aligned_cols=80  Identities=64%  Similarity=1.117  Sum_probs=78.3

Q ss_pred             CccccCCCcccccCCcchhccccccccccCCCeEEECCeeehhhhhhcccccccccccchhHHHHHHhhhhhhhcCCCCC
Q 010591          178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFN  257 (506)
Q Consensus       178 ~~CQV~GC~~dLs~~k~YhrRhrVCe~H~kA~~V~v~G~~qRFCQQCsrFH~L~eFDg~kRSCR~rL~~hn~RRRk~q~~  257 (506)
                      ..|||+||++||+.+|+||+||||||.|+|||.|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++++
T Consensus         2 ~~CqVdgC~~dls~~k~YhrRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~   81 (81)
T d1ul4a_           2 RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE   81 (81)
T ss_dssp             CCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC
T ss_pred             CeeeeCCCcchHHhhHHhhhhhHHHHHHcCCCeEEECCeechHHHHhcccccHHHhccccccHHHHHHHHhHHhccCCCC
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999875

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=4e-31  Score=206.25  Aligned_cols=57  Identities=63%  Similarity=1.145  Sum_probs=55.9

Q ss_pred             CccccCCCcccccCCcchhccccccccccCCCeEEECCeeehhhhhhcccccccccc
Q 010591          178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD  234 (506)
Q Consensus       178 ~~CQV~GC~~dLs~~k~YhrRhrVCe~H~kA~~V~v~G~~qRFCQQCsrFH~L~eFD  234 (506)
                      .+|||+||++||+.+|+|||||||||.|+|||.|+|+|+++||||||+|||+|+|||
T Consensus         2 ~~CqV~gC~~dl~~~k~YhrRhkvCe~H~ka~~V~v~G~~~RFCQQCsrFH~L~eFD   58 (58)
T d1wj0a_           2 ICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   58 (58)
T ss_dssp             EECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             ceeEeCCcchhhhhhHHhcchhhHHHHhcCCCeEEECCcccccccccCCcccccccC
Confidence            379999999999999999999999999999999999999999999999999999998