Query 010594
Match_columns 506
No_of_seqs 237 out of 816
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 02:21:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010594.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010594hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 2E-59 4.3E-64 503.0 22.4 350 111-467 67-450 (464)
2 PF03016 Exostosin: Exostosin 100.0 2E-54 4.4E-59 435.0 17.7 286 113-427 1-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 7.8E-21 1.7E-25 200.3 15.7 262 161-445 211-506 (907)
4 KOG1022 Acetylglucosaminyltran 99.4 1E-12 2.3E-17 139.1 11.6 239 176-441 130-384 (691)
5 cd03814 GT1_like_2 This family 96.1 0.025 5.3E-07 56.5 8.9 94 350-449 258-353 (364)
6 PF00852 Glyco_transf_10: Glyc 95.9 0.011 2.4E-07 62.1 5.4 137 280-428 146-296 (349)
7 cd03801 GT1_YqgM_like This fam 95.9 0.03 6.4E-07 54.9 8.0 94 350-449 267-363 (374)
8 cd03820 GT1_amsD_like This fam 95.8 0.041 9E-07 53.9 8.6 95 350-449 244-340 (348)
9 cd03822 GT1_ecORF704_like This 95.4 0.078 1.7E-06 53.1 9.1 93 350-449 259-355 (366)
10 cd03794 GT1_wbuB_like This fam 95.2 0.085 1.8E-06 52.5 8.6 94 350-449 286-387 (394)
11 PF00534 Glycos_transf_1: Glyc 95.1 0.028 6E-07 51.4 4.6 86 349-440 83-170 (172)
12 PLN02871 UDP-sulfoquinovose:DA 94.5 0.13 2.8E-06 55.6 8.5 93 350-448 323-420 (465)
13 cd03818 GT1_ExpC_like This fam 94.4 0.2 4.3E-06 52.6 9.4 118 323-449 266-388 (396)
14 cd03821 GT1_Bme6_like This fam 93.8 0.22 4.8E-06 49.4 7.8 92 350-449 273-367 (375)
15 TIGR03449 mycothiol_MshA UDP-N 93.7 0.26 5.6E-06 51.5 8.5 95 350-449 294-389 (405)
16 cd03806 GT1_ALG11_like This fa 93.5 0.42 9.1E-06 51.2 10.0 135 306-449 273-414 (419)
17 cd03823 GT1_ExpE7_like This fa 93.5 0.39 8.5E-06 47.6 9.2 89 350-443 254-344 (359)
18 cd03808 GT1_cap1E_like This fa 93.4 0.24 5.2E-06 48.7 7.4 90 351-446 256-348 (359)
19 cd03800 GT1_Sucrose_synthase T 93.3 0.15 3.3E-06 52.3 6.0 94 350-449 294-390 (398)
20 cd05844 GT1_like_7 Glycosyltra 93.1 0.49 1.1E-05 48.2 9.4 94 350-449 256-358 (367)
21 cd03809 GT1_mtfB_like This fam 92.9 0.27 5.9E-06 49.1 7.0 92 350-449 264-357 (365)
22 cd03817 GT1_UGDG_like This fam 92.7 0.45 9.7E-06 47.3 8.1 92 350-447 270-362 (374)
23 cd03811 GT1_WabH_like This fam 92.6 0.67 1.4E-05 45.3 9.1 83 352-437 257-341 (353)
24 cd04962 GT1_like_5 This family 92.5 0.29 6.3E-06 49.9 6.7 93 351-449 263-358 (371)
25 cd03799 GT1_amsK_like This is 92.4 0.79 1.7E-05 46.0 9.6 94 350-449 247-349 (355)
26 cd03819 GT1_WavL_like This fam 92.4 0.34 7.4E-06 48.9 6.9 93 350-448 255-352 (355)
27 TIGR03088 stp2 sugar transfera 92.1 0.54 1.2E-05 48.5 8.2 93 351-449 265-360 (374)
28 PRK09814 beta-1,6-galactofuran 91.6 0.16 3.4E-06 52.6 3.4 88 350-446 218-316 (333)
29 PRK15427 colanic acid biosynth 91.0 1.3 2.9E-05 47.2 10.0 92 350-448 290-392 (406)
30 TIGR02149 glgA_Coryne glycogen 90.7 2 4.3E-05 44.3 10.7 97 350-449 272-374 (388)
31 cd03804 GT1_wbaZ_like This fam 90.5 0.55 1.2E-05 48.0 6.2 62 349-414 252-313 (351)
32 cd03798 GT1_wlbH_like This fam 90.0 0.74 1.6E-05 45.3 6.6 63 350-415 270-332 (377)
33 cd03792 GT1_Trehalose_phosphor 89.2 1.9 4E-05 44.8 9.1 94 350-449 265-359 (372)
34 cd03805 GT1_ALG2_like This fam 88.7 1.8 4E-05 44.6 8.5 93 351-449 292-386 (392)
35 cd03825 GT1_wcfI_like This fam 88.6 0.89 1.9E-05 45.8 6.1 89 350-443 256-345 (365)
36 PRK10307 putative glycosyl tra 88.6 1.2 2.5E-05 47.0 7.1 95 350-450 295-396 (412)
37 cd04955 GT1_like_6 This family 87.9 2.5 5.4E-05 42.6 8.8 85 350-443 259-345 (363)
38 cd03807 GT1_WbnK_like This fam 87.7 0.66 1.4E-05 45.8 4.3 91 351-449 261-354 (365)
39 cd03816 GT1_ALG1_like This fam 87.4 2.1 4.6E-05 45.6 8.3 123 306-443 269-399 (415)
40 cd04951 GT1_WbdM_like This fam 86.6 3 6.5E-05 41.9 8.5 90 351-448 255-347 (360)
41 cd03795 GT1_like_4 This family 86.1 2.3 5.1E-05 42.6 7.4 94 350-448 255-353 (357)
42 PLN02949 transferase, transfer 85.8 2.6 5.7E-05 46.1 8.0 96 350-449 346-444 (463)
43 KOG2619 Fucosyltransferase [Ca 85.7 4.1 9E-05 43.4 9.1 122 303-433 194-322 (372)
44 TIGR03087 stp1 sugar transfera 84.9 2 4.4E-05 45.1 6.5 91 351-449 290-384 (397)
45 PF13524 Glyco_trans_1_2: Glyc 84.3 0.85 1.8E-05 37.7 2.7 81 362-449 2-84 (92)
46 cd04949 GT1_gtfA_like This fam 83.7 1 2.2E-05 46.4 3.5 95 351-449 271-366 (372)
47 PRK15484 lipopolysaccharide 1, 83.0 5.7 0.00012 41.8 8.9 94 350-449 268-365 (380)
48 cd03802 GT1_AviGT4_like This f 82.5 2.2 4.8E-05 42.5 5.4 42 350-392 235-277 (335)
49 PRK09922 UDP-D-galactose:(gluc 81.4 9.3 0.0002 39.5 9.7 91 351-443 250-341 (359)
50 PF13692 Glyco_trans_1_4: Glyc 81.1 0.6 1.3E-05 40.8 0.6 56 350-409 62-118 (135)
51 PRK14098 glycogen synthase; Pr 79.1 6.6 0.00014 43.2 8.0 84 351-439 374-465 (489)
52 cd03812 GT1_CapH_like This fam 78.9 8.4 0.00018 38.8 8.2 40 351-391 259-298 (358)
53 TIGR02095 glgA glycogen/starch 78.1 3.2 7E-05 44.9 5.2 84 351-439 358-452 (473)
54 cd03791 GT1_Glycogen_synthase_ 77.0 18 0.00038 38.9 10.4 85 351-440 363-457 (476)
55 cd03813 GT1_like_3 This family 76.5 4.6 0.0001 43.9 5.8 88 351-443 363-457 (475)
56 PRK00654 glgA glycogen synthas 75.0 5.2 0.00011 43.4 5.7 83 352-439 350-442 (466)
57 cd04946 GT1_AmsK_like This fam 74.8 12 0.00025 39.9 8.2 93 351-448 301-398 (407)
58 TIGR02472 sucr_P_syn_N sucrose 74.2 3.4 7.3E-05 44.4 4.0 85 360-449 342-428 (439)
59 PRK14099 glycogen synthase; Pr 73.2 6.1 0.00013 43.4 5.7 85 351-440 361-459 (485)
60 cd03796 GT1_PIG-A_like This fa 72.1 6.9 0.00015 41.1 5.7 96 350-451 261-357 (398)
61 PRK15490 Vi polysaccharide bio 69.8 15 0.00033 41.5 7.8 62 351-415 465-526 (578)
62 PHA01630 putative group 1 glyc 68.9 10 0.00022 39.5 6.0 41 350-391 201-241 (331)
63 TIGR02918 accessory Sec system 65.4 23 0.00051 39.2 8.3 95 352-449 386-487 (500)
64 PLN02939 transferase, transfer 63.6 22 0.00047 42.6 7.8 93 353-449 851-954 (977)
65 PRK13608 diacylglycerol glucos 61.8 27 0.00058 37.0 7.6 82 351-444 266-354 (391)
66 KOG1387 Glycosyltransferase [C 61.7 33 0.00072 36.7 7.9 91 350-446 348-443 (465)
67 PLN02605 monogalactosyldiacylg 60.2 41 0.00088 35.3 8.7 78 351-441 275-361 (382)
68 TIGR01133 murG undecaprenyldip 57.3 12 0.00025 38.1 3.8 84 351-441 243-334 (348)
69 cd01635 Glycosyltransferase_GT 55.6 53 0.0012 30.0 7.7 79 306-391 135-213 (229)
70 TIGR02468 sucrsPsyn_pln sucros 54.9 26 0.00056 42.4 6.6 83 361-449 574-658 (1050)
71 PHA01633 putative glycosyl tra 53.9 14 0.00031 38.9 3.9 41 350-391 215-255 (335)
72 cd03793 GT1_Glycogen_synthase_ 52.2 13 0.00028 42.1 3.4 100 351-451 467-576 (590)
73 PLN00142 sucrose synthase 51.7 32 0.00069 40.6 6.5 109 354-465 661-777 (815)
74 PRK05749 3-deoxy-D-manno-octul 45.5 16 0.00034 38.9 2.7 104 351-469 312-421 (425)
75 PLN02275 transferase, transfer 44.0 79 0.0017 33.0 7.7 75 306-391 261-341 (371)
76 TIGR00236 wecB UDP-N-acetylglu 43.4 87 0.0019 32.3 7.8 59 322-390 242-300 (365)
77 cd04950 GT1_like_1 Glycosyltra 38.9 15 0.00032 38.5 1.2 40 350-390 265-309 (373)
78 TIGR02470 sucr_synth sucrose s 35.1 88 0.0019 36.9 6.8 102 360-464 645-753 (784)
79 PRK15179 Vi polysaccharide bio 34.1 1.2E+02 0.0026 35.2 7.6 60 352-414 585-644 (694)
80 PF02532 PsbI: Photosystem II 33.0 84 0.0018 22.5 3.8 18 31-48 16-33 (36)
81 PF07172 GRP: Glycine rich pro 30.6 41 0.00089 29.1 2.4 13 18-30 3-15 (95)
82 COG5111 RPC34 DNA-directed RNA 30.2 28 0.0006 34.9 1.5 39 89-127 114-153 (301)
83 PRK00726 murG undecaprenyldiph 29.5 86 0.0019 32.1 5.1 84 351-441 245-337 (357)
84 PRK10125 putative glycosyl tra 29.3 1.5E+02 0.0033 31.6 7.1 62 350-415 298-359 (405)
85 cd03788 GT1_TPS Trehalose-6-Ph 29.2 51 0.0011 35.9 3.5 90 350-445 352-445 (460)
86 TIGR03590 PseG pseudaminic aci 26.6 1.1E+02 0.0025 30.8 5.2 34 350-389 233-266 (279)
87 TIGR02400 trehalose_OtsA alpha 24.7 1.3E+02 0.0028 33.0 5.5 88 349-443 346-438 (456)
88 PF12273 RCR: Chitin synthesis 24.1 52 0.0011 29.6 2.0 19 21-39 3-21 (130)
89 smart00672 CAP10 Putative lipo 23.7 3E+02 0.0065 27.8 7.6 139 300-445 78-231 (256)
90 cd03785 GT1_MurG MurG is an N- 23.3 72 0.0015 32.3 3.1 84 351-443 245-339 (350)
91 CHL00024 psbI photosystem II p 21.2 78 0.0017 22.6 1.9 17 33-49 18-34 (36)
92 COG2989 Uncharacterized protei 20.9 46 0.001 37.2 1.1 11 117-127 450-460 (561)
93 COG0438 RfaG Glycosyltransfera 20.0 91 0.002 29.6 2.9 41 350-391 268-308 (381)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=2e-59 Score=503.01 Aligned_cols=350 Identities=30% Similarity=0.487 Sum_probs=278.3
Q ss_pred cCCCCCCeEEEecCCchhhHHHHHhhhhc---CCC---CCCCcCC---CCCcc---cccccccchhhHHhhccchH---H
Q 010594 111 YPLSLPIRVYVYEMPRKFTYDLLWLFRNT---YKD---TSNLTSN---GSPVH---RLIEQHSIDYWLWADLIVPE---S 175 (506)
Q Consensus 111 ~p~~~~~~IYVYdLPp~FN~~lL~~c~~~---~~~---~~~~~~~---g~p~~---~l~~q~~~~~W~~td~~~~e---~ 175 (506)
+..|.+.+||||+||+.||.+++..|... +.. +|.+..+ +.... +-..++..++|+.+|||+.| |
T Consensus 67 ~~~~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~ 146 (464)
T KOG1021|consen 67 QAICAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFH 146 (464)
T ss_pred hhcccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHH
Confidence 44789999999999999999999988654 222 3333222 11111 01124556899999999998 6
Q ss_pred HHh--hcCccccCCCCCccEEEEeeccchhhhh--h-c-----HHHHHHHHHHHHHHHhcCccccccCCCCeeeecCCCC
Q 010594 176 ERL--LKNVVRVRLQEEADLFYIPFFTTISFFL--L-E-----KQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPW 245 (506)
Q Consensus 176 erL--l~s~~rT~DPeeAdlFyVP~y~~l~~~~--~-~-----~~~~~~l~~~~v~~L~~~P~W~R~gGrDHf~v~~~~w 245 (506)
.++ ..++|||.||++||+||||||+++++.. . . ....+.+..+++.|+++||||||++|+|||||++|+|
T Consensus 147 ~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~ 226 (464)
T KOG1021|consen 147 NRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDW 226 (464)
T ss_pred HHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcc
Confidence 888 4789999999999999999999998632 1 1 1346677888999999999999999999999999999
Q ss_pred ChhhhhhhhhchhhcccCcCCCCCcccCCCccccCccccCCCCCCCCCCcc----cccCCCCCCceEEEeecccccCCCC
Q 010594 246 SFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVK----CVSESESKRSTLLFFRGRLKRNAGG 321 (506)
Q Consensus 246 ~f~~~r~~~~nai~ll~~~~~~~~~~~pg~~~~~kDVvIPy~~~~~~~~~~----~~~~~~~~R~~L~~FaG~~~~~~~~ 321 (506)
+....+..+++++.+++++.+++ ++..++..-.+||+|||++.+|+.... .......+|++|+||+|++ .++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~n~a-~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~---~~~ 302 (464)
T KOG1021|consen 227 GDFRRRSDWGASISLIPEFCNGA-LLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP---AGG 302 (464)
T ss_pred hheeeccchhhHHHHHHhhCCcc-eeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc---cCC
Confidence 87665556777777778877653 445543333399999999888765443 3345668999999999986 578
Q ss_pred hhHHHHHHHHhCCCC-eEEEc---CCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCC
Q 010594 322 KIRAKLVAELSSAEG-VVIEE---GTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFE 397 (506)
Q Consensus 322 ~iR~~L~~~~~~~~~-~~i~~---~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe 397 (506)
.||+.|+++|++.++ +.... +..++.++..|++.|++|+|||||+||++||+|+||||++|||||||+|++++||+
T Consensus 303 ~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~ 382 (464)
T KOG1021|consen 303 QIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFG 382 (464)
T ss_pred cHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcC
Confidence 999999999999332 33333 33334567899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEEcCCCcCCcchHHHHHcCCCHHHHHHHHHHHhh-hcceeEEccCCCCCCchhHHHHHHHh
Q 010594 398 GILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQ-YSRHFLYSSPAQPLGPEDLVWRMIAG 467 (506)
Q Consensus 398 ~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~p~~~~~~~D~~~~~i~~ 467 (506)
+++||++|||+|+++++++. |.++|.+|+.+++.+||+++++ +.+||++..+ ++...+||++.++.+
T Consensus 383 ~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~-~~~~~~da~~~~~~~ 450 (464)
T KOG1021|consen 383 DVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPP-GPPKRGDAFHMILHS 450 (464)
T ss_pred CCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCC-CCCCcchhHHHHHhh
Confidence 99999999999998888872 5999999999999999999996 8888888875 444556777777666
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=2e-54 Score=435.02 Aligned_cols=286 Identities=30% Similarity=0.487 Sum_probs=214.6
Q ss_pred CCCCCeEEEecCCchhhHHHHHhhhhcCCCCCCCcCCCCCcccccccccchhhHHhhccchH---HHHhhcCccccCCCC
Q 010594 113 LSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPE---SERLLKNVVRVRLQE 189 (506)
Q Consensus 113 ~~~~~~IYVYdLPp~FN~~lL~~c~~~~~~~~~~~~~g~p~~~l~~q~~~~~W~~td~~~~e---~erLl~s~~rT~DPe 189 (506)
++.++||||||||++||.+++..... ....|..++++..| +++|++|+++|.||+
T Consensus 1 ~~~~lkVYVY~lp~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~e~~l~~~l~~s~~~T~dp~ 58 (302)
T PF03016_consen 1 SHRGLKVYVYPLPPKFNKDLLDPRED----------------------EQCSWYETSQYALEVILHEALLNSPFRTDDPE 58 (302)
T ss_pred CCCCCEEEEEeCCccccccceecccc----------------------ccCCCcccccchHHHHHHHHHHhCCcEeCCHH
Confidence 47899999999999999988721000 01123334455555 588999999999999
Q ss_pred CccEEEEeeccchhhh-----hhcHHHHHHHHHHHHHHHhcCccccccCCCCeeeecCCCCChhhh---hhhhhchhhcc
Q 010594 190 EADLFYIPFFTTISFF-----LLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSV---RRYVKNAIWLL 261 (506)
Q Consensus 190 eAdlFyVP~y~~l~~~-----~~~~~~~~~l~~~~v~~L~~~P~W~R~gGrDHf~v~~~~w~f~~~---r~~~~nai~ll 261 (506)
|||+||||+|.++... .........+...+.++++++|||||++|+||||+.+++|+.+.. .....+.++.+
T Consensus 59 eAdlF~vP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~ 138 (302)
T PF03016_consen 59 EADLFFVPFYSSCYFHHWWGSPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAV 138 (302)
T ss_pred HCeEEEEEcccccccccccCCccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhhe
Confidence 9999999999998721 111123445555677778899999999999999999999665432 22333444443
Q ss_pred cCcCCCCCcccCCCccccCccccCCCCCCCCCCcc--cccCCCCCCceEEEeecccccC---CCChhHHHHHHHHhCCCC
Q 010594 262 PDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVK--CVSESESKRSTLLFFRGRLKRN---AGGKIRAKLVAELSSAEG 336 (506)
Q Consensus 262 ~~~~~~~~~~~pg~~~~~kDVvIPy~~~~~~~~~~--~~~~~~~~R~~L~~FaG~~~~~---~~~~iR~~L~~~~~~~~~ 336 (506)
.... ++..++..+++||++|+.......... .......+|++|++|+|.++.. .++.+|+.|++.|++.++
T Consensus 139 ~~~~----~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~ 214 (302)
T PF03016_consen 139 VAFS----SFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPD 214 (302)
T ss_pred eccC----CCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCc
Confidence 2111 122223334599999985433221111 1234568999999999998875 346999999999999888
Q ss_pred eEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCC
Q 010594 337 VVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQ 416 (506)
Q Consensus 337 ~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~ 416 (506)
..+........+..+|.+.|++|+|||+|+|+++++.||+|||.+|||||||+|++.|||+++|||++|||+|+++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~ 294 (302)
T PF03016_consen 215 FRCSDGSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPE 294 (302)
T ss_pred ceeeecccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHH
Confidence 76554333344566799999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cchHHHHHcCC
Q 010594 417 PGYLLKFLRGI 427 (506)
Q Consensus 417 ~~~L~~iL~~I 427 (506)
|+++|++|
T Consensus 295 ---l~~iL~~i 302 (302)
T PF03016_consen 295 ---LPEILRSI 302 (302)
T ss_pred ---HHHHHhcC
Confidence 99999987
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.85 E-value=7.8e-21 Score=200.35 Aligned_cols=262 Identities=24% Similarity=0.305 Sum_probs=169.2
Q ss_pred cchhhHHhhccchHHHHhhcCccccCCCCCccEEEEeeccchhhhhhcHHHHHHHHHHHHHHHhcCccccccCCCCeeee
Q 010594 161 SIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILP 240 (506)
Q Consensus 161 ~~~~W~~td~~~~e~erLl~s~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~~l~~~~v~~L~~~P~W~R~gGrDHf~v 240 (506)
+.+.|+.+- + -+-+....+.|+||+.||++.+-.-.--.--... -.+ ++.|-+.||| |+.|+||+++
T Consensus 211 ~~d~~lk~~--f--q~t~~~n~~~ve~pd~ACiyi~lvge~q~P~~l~-------p~e-leklyslp~w-~~dg~Nhvl~ 277 (907)
T KOG2264|consen 211 SEDEWLKQV--F--QETIPNNVYLVETPDKACIYIHLVGEIQSPVVLT-------PAE-LEKLYSLPHW-RTDGFNHVLF 277 (907)
T ss_pred chHHHHHHH--H--HHhcccceeEeeCCCccEEEEEEeccccCCCcCC-------hHh-hhhhhcCccc-cCCCcceEEE
Confidence 456676532 1 1345567789999999999866322110000011 112 2336678999 5899999998
Q ss_pred cCCCCChhh---hhhhhhchhhcccCcCCCCCcccCCCccccCccccCCCC--CCCCCCcccccCCCCCCceEEEeeccc
Q 010594 241 VHHPWSFKS---VRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVP--NVDFCDVKCVSESESKRSTLLFFRGRL 315 (506)
Q Consensus 241 ~~~~w~f~~---~r~~~~nai~ll~~~~~~~~~~~pg~~~~~kDVvIPy~~--~~~~~~~~~~~~~~~~R~~L~~FaG~~ 315 (506)
.-+.-.... .+...+.+|-+...|. +..|+|| .|+++|..- ........+....+.+|+||+.|+|.+
T Consensus 278 Nl~r~s~~~n~lyn~~t~raivvQssf~--~~q~Rpg-----fDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~t~qgki 350 (907)
T KOG2264|consen 278 NLGRPSDTQNLLYNFQTGRAIVVQSSFY--TVQIRPG-----FDLPVDPVNHIAVEKNFVELTPLVPFQRKYLITLQGKI 350 (907)
T ss_pred EccCccccccceeEeccCceEEEeecce--eeeeccC-----CCcccCcccccccCccceecCcccchhhheeEEEEeee
Confidence 742211110 0011234455555443 2347777 798887431 111212233345678999999999998
Q ss_pred ccCCCC-hhHHHHHHHHhCCC--------CeEEEcCC------CC--------CcchhhHHhccccCcEEE-ccCCCCCC
Q 010594 316 KRNAGG-KIRAKLVAELSSAE--------GVVIEEGT------AG--------EVGKAAAQNGMRRSIFCL-NPAGDTPS 371 (506)
Q Consensus 316 ~~~~~~-~iR~~L~~~~~~~~--------~~~i~~~~------~~--------~~~~~~~~~~m~~S~FCL-~P~Gds~t 371 (506)
++..+. +--.....++.+++ .++...|. .+ |+......+++..|+||| .|+||+--
T Consensus 351 ~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv 430 (907)
T KOG2264|consen 351 ESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRV 430 (907)
T ss_pred cccccccchhhhhHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcch
Confidence 865432 21223333343332 12222111 11 233456778999999998 58898632
Q ss_pred -----CchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCCHHHHHHHHHHHhhhcce
Q 010594 372 -----SARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRH 445 (506)
Q Consensus 372 -----s~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is~e~i~~Mr~~l~~v~~~ 445 (506)
-.|+++|+..||||||+++...|||.+.|||++.++.+|...+.+ ++-+|+++...++.+||++.+-++..
T Consensus 431 ~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrraal~lPkaR~tE---~HFllrs~~dsDll~mRRqGRl~wEt 506 (907)
T KOG2264|consen 431 ISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRRAALRLPKARLTE---AHFLLRSFEDSDLLEMRRQGRLFWET 506 (907)
T ss_pred hhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHHHhhhCCccccch---HHHHHHhcchhhHHHHHhhhhhhHHH
Confidence 379999999999999999999999999999999999999999988 99999999999999999999555443
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.41 E-value=1e-12 Score=139.15 Aligned_cols=239 Identities=19% Similarity=0.176 Sum_probs=160.4
Q ss_pred HHhhcCccccCCCCCccEEEEeeccchhhhhhcHHHHHHHHHHHHHHHhcCccccccCCCCeeeecCC---CCChhhhhh
Q 010594 176 ERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHH---PWSFKSVRR 252 (506)
Q Consensus 176 erLl~s~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~~l~~~~v~~L~~~P~W~R~gGrDHf~v~~~---~w~f~~~r~ 252 (506)
|....|..-|.|+++|++| +|-..-+.++.++.... ...|++.-.|.| |.+|..+..- +-+...+.+
T Consensus 130 eA~~~S~yyt~n~N~aclf-~Ps~d~lnQn~l~~kl~-------~~ala~l~~wdr--g~nH~~fnmLpGg~p~yntald 199 (691)
T KOG1022|consen 130 EAWHLSFYYTFNYNGACLF-MPSSDELNQNPLSWKLE-------KVALAKLLVWDR--GVNHEGFNMLPGGDPTYNTALD 199 (691)
T ss_pred HHHHhccceecCCCceEEE-ecchhhhccCcchHHHH-------HHHHhcccchhc--ccceeeEeeccCCCCCcccccc
Confidence 4566788899999999999 88877766544432211 122556678985 9999987642 222221111
Q ss_pred h-hhchhhcccCcCCCCCcccCCCccccCccccCC-CCCCCCCCcccccCCCCCCceEEEeecccccCCCChhHHHHHHH
Q 010594 253 Y-VKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPY-VPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAE 330 (506)
Q Consensus 253 ~-~~nai~ll~~~~~~~~~~~pg~~~~~kDVvIPy-~~~~~~~~~~~~~~~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~ 330 (506)
. ..+++.....+++++ |++| +||.+|. .|. .. .. .......|.+++-=. +-+.+..+|..+++.
T Consensus 200 v~~d~a~~~gggf~tW~--yr~g-----~dv~ipv~Sp~-~v-~~--~~~~~g~r~~~l~~~---q~n~~pr~r~~l~el 265 (691)
T KOG1022|consen 200 VGQDEAWYSGGGFGTWK--YRKG-----NDVYIPVRSPG-NV-GR--AFLYDGSRYRVLQDC---QENYGPRIRVSLIEL 265 (691)
T ss_pred CCcceeEEecCCcCccc--ccCC-----Ccccccccccc-cc-Cc--cccCCccceeeeecc---ccccchHhHHhHHHH
Confidence 1 123333344454332 7776 8999995 333 11 00 111233454443322 234567899998887
Q ss_pred HhCCCC-eEEEc-CCC------C-Cc--chhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCC
Q 010594 331 LSSAEG-VVIEE-GTA------G-EV--GKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGI 399 (506)
Q Consensus 331 ~~~~~~-~~i~~-~~~------~-~~--~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~v 399 (506)
..+... .+... |.. + +. -...|...+...+||+.-+|.+-...-+.+-+.+||||||..|.+.+||+++
T Consensus 266 ~~kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~V 345 (691)
T KOG1022|consen 266 LSKHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGV 345 (691)
T ss_pred HhhccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhh
Confidence 765543 22222 111 1 01 1136778899999999999888888889999999999999999999999999
Q ss_pred CCCCcEEEEEcCCCcCCcchHHHHHcCCCHHHHHHHHHHHhh
Q 010594 400 LDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQ 441 (506)
Q Consensus 400 lDw~~fSV~I~e~dv~~~~~L~~iL~~Is~e~i~~Mr~~l~~ 441 (506)
+||...||.++|..+.+ +.+.|.+|+...+-+||.+...
T Consensus 346 vdw~~aSv~~~e~~~~~---v~~~l~~i~~~~i~sl~~r~~~ 384 (691)
T KOG1022|consen 346 VDWIVASVWCMEYYAGK---VMDALLNIETAGICSLQLRRIG 384 (691)
T ss_pred hhceeeeEEeehhhHHH---HHHHhhcchhcchhhhhhhhhh
Confidence 99999999999988876 9999999999999888877644
No 5
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.12 E-value=0.025 Score=56.52 Aligned_cols=94 Identities=17% Similarity=0.197 Sum_probs=64.1
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI-- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I-- 427 (506)
.+..+.|..+.+++.|.+....+..++|||++|| |||.++.-. ..+++.-....+.++..+..+ +.+.+..+
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~---l~~~i~~l~~ 331 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEA---FAAALAALLA 331 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHH---HHHHHHHHHc
Confidence 4567889999999999887767889999999999 888887432 223333334556666655533 33333322
Q ss_pred CHHHHHHHHHHHhhhcceeEEc
Q 010594 428 SPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
.+++..+|.++..+....+.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~ 353 (364)
T cd03814 332 DPELRRRMAARARAEAERRSWE 353 (364)
T ss_pred CHHHHHHHHHHHHHHHhhcCHH
Confidence 5788889988887766554443
No 6
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=95.90 E-value=0.011 Score=62.15 Aligned_cols=137 Identities=15% Similarity=0.160 Sum_probs=63.8
Q ss_pred CccccCCCCCCCCCCcc---cccCCCCCCceEEE-eecccccCCCChhHHHHHHHHhCCCCeEEEcCC-CCC-cchhhHH
Q 010594 280 KDLILPYVPNVDFCDVK---CVSESESKRSTLLF-FRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGT-AGE-VGKAAAQ 353 (506)
Q Consensus 280 kDVvIPy~~~~~~~~~~---~~~~~~~~R~~L~~-FaG~~~~~~~~~iR~~L~~~~~~~~~~~i~~~~-~~~-~~~~~~~ 353 (506)
-||.+||.......... ........++.++. ++.... ...-|.++++++.+.-.+.....+ ... .......
T Consensus 146 SDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~---~~~~R~~~~~~L~~~~~vd~yG~c~~~~~~~~~~~~ 222 (349)
T PF00852_consen 146 SDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCN---PHSGREEYVRELSKYIPVDSYGKCGNNNPCPRDCKL 222 (349)
T ss_dssp ---------------------------TSSEEEEE--S-S-----H-HHHHHHHHHHTTS-EEE-SSTT--SSS--S-HH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEeeCcC---CcccHHHHHHHHHhhcCeEccCCCCCCCCccccccc
Confidence 69999985432111100 11112334444444 444432 223499999999988655554322 111 1223477
Q ss_pred hccccCcEEEccCC---CCCCCchHHHHHHhCceeEEee--CC-c--ccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHc
Q 010594 354 NGMRRSIFCLNPAG---DTPSSARLFDAIVSGCIPVIVS--DE-L--ELPFEGILDYRKIALFVSSSDATQPGYLLKFLR 425 (506)
Q Consensus 354 ~~m~~S~FCL~P~G---ds~ts~RlfDAi~aGCIPViis--d~-~--~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~ 425 (506)
+.+++-+|.|+..- ....+--+|+|+.+|||||+++ .. + .+|-...|+.++| ..+..|.+.|+
T Consensus 223 ~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df---------~s~~~La~yl~ 293 (349)
T PF00852_consen 223 ELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDF---------KSPKELADYLK 293 (349)
T ss_dssp HHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGS---------SSHHHHHHHHH
T ss_pred ccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcC---------CCHHHHHHHHH
Confidence 88999999998654 3566889999999999999999 33 2 3665555554443 33334777777
Q ss_pred CCC
Q 010594 426 GIS 428 (506)
Q Consensus 426 ~Is 428 (506)
.+.
T Consensus 294 ~l~ 296 (349)
T PF00852_consen 294 YLD 296 (349)
T ss_dssp HHH
T ss_pred HHh
Confidence 663
No 7
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=95.85 E-value=0.03 Score=54.93 Aligned_cols=94 Identities=16% Similarity=0.210 Sum_probs=64.4
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI-- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I-- 427 (506)
.++.+.|.+|.+.++|.-....+..++|||.+|| |||..+. -.+.+.+......+.++..+..+ +.+.|..+
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~---l~~~i~~~~~ 340 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEA---LAEAILRLLD 340 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 5677889999999999876666788999999998 6777765 23344455456677777765433 55555442
Q ss_pred CHHHHHHHHHHHh-hhcceeEEc
Q 010594 428 SPAQIREMRRNLV-QYSRHFLYS 449 (506)
Q Consensus 428 s~e~i~~Mr~~l~-~v~~~f~Y~ 449 (506)
.++...+|.++.. .+.+.+.|.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~ 363 (374)
T cd03801 341 DPELRRRLGEAARERVAERFSWD 363 (374)
T ss_pred ChHHHHHHHHHHHHHHHHhcCHH
Confidence 4667778888776 444554433
No 8
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=95.77 E-value=0.041 Score=53.87 Aligned_cols=95 Identities=17% Similarity=0.130 Sum_probs=63.0
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI-- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I-- 427 (506)
.+..+.|+++.+++.|.........++|||.+||. ||.++....+ +++++-....+.++..|+.+ +.+.+..+
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~P-vi~~~~~~~~-~~~~~~~~~g~~~~~~~~~~---~~~~i~~ll~ 318 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLP-VISFDCPTGP-SEIIEDGVNGLLVPNGDVEA---LAEALLRLME 318 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCC-EEEecCCCch-HhhhccCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 45678899999999998766567889999999995 5555532222 22233334566676666443 44444433
Q ss_pred CHHHHHHHHHHHhhhcceeEEc
Q 010594 428 SPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
.++...+|.++..+..+.|-|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~ 340 (348)
T cd03820 319 DEELRKRMGANARESAERFSIE 340 (348)
T ss_pred CHHHHHHHHHHHHHHHHHhCHH
Confidence 6788888998887776665544
No 9
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=95.37 E-value=0.078 Score=53.06 Aligned_cols=93 Identities=23% Similarity=0.267 Sum_probs=63.8
Q ss_pred hhHHhccccCcEEEccCCCC--CCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDT--PSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds--~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I 427 (506)
.+..+.|+.+.+++.|.... ..+..+.|||.+|+ |||.++.-. .+.+.+. .-.+.++..|+.+ +.+.|..+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~~-~~g~~~~~~d~~~---~~~~l~~l 331 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLDG-GTGLLVPPGDPAA---LAEAIRRL 331 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeeeC-CCcEEEcCCCHHH---HHHHHHHH
Confidence 45678899999999998777 67788999999999 999987533 3333332 3345566555433 44444332
Q ss_pred --CHHHHHHHHHHHhhhcceeEEc
Q 010594 428 --SPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 428 --s~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
.+++..+|+++..+..+.+.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~~ 355 (366)
T cd03822 332 LADPELAQALRARAREYARAMSWE 355 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCHH
Confidence 4578889999988877764433
No 10
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.18 E-value=0.085 Score=52.53 Aligned_cols=94 Identities=21% Similarity=0.302 Sum_probs=61.8
Q ss_pred hhHHhccccCcEEEccCCCCCC-----CchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHH
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPS-----SARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFL 424 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~t-----s~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL 424 (506)
.++.+.|..+.++++|...+.. ...++|||.+|| |||..+.-..+ +.+.-....+.++..+..+ +.+.|
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~--~~~~~~~~g~~~~~~~~~~---l~~~i 359 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESA--ELVEEAGAGLVVPPGDPEA---LAAAI 359 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCch--hhhccCCcceEeCCCCHHH---HHHHH
Confidence 4667889999999999876543 456899999997 88887653222 1122124556666655443 54444
Q ss_pred cCC--CHHHHHHHHHHHhhhcc-eeEEc
Q 010594 425 RGI--SPAQIREMRRNLVQYSR-HFLYS 449 (506)
Q Consensus 425 ~~I--s~e~i~~Mr~~l~~v~~-~f~Y~ 449 (506)
..+ .+++..+|.++..+... +|-|.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 360 LELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 443 67888889888777654 55554
No 11
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.12 E-value=0.028 Score=51.40 Aligned_cols=86 Identities=19% Similarity=0.290 Sum_probs=52.2
Q ss_pred hhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCC
Q 010594 349 KAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGIS 428 (506)
Q Consensus 349 ~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is 428 (506)
..+..+.++.+.+.++|......+..+.|||.+|| |||.++.- .+.+++.=..-.+.++..++.+ +.+.+..+-
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~--~~~e~~~~~~~g~~~~~~~~~~---l~~~i~~~l 156 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIG--GNNEIINDGVNGFLFDPNDIEE---LADAIEKLL 156 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESST--HHHHHSGTTTSEEEESTTSHHH---HHHHHHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeecccc--CCceeeccccceEEeCCCCHHH---HHHHHHHHH
Confidence 34678899999999999988888899999999999 66677631 1122221122345565555443 444444432
Q ss_pred --HHHHHHHHHHHh
Q 010594 429 --PAQIREMRRNLV 440 (506)
Q Consensus 429 --~e~i~~Mr~~l~ 440 (506)
++....|.++.+
T Consensus 157 ~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 157 NDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 355666666554
No 12
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=94.53 E-value=0.13 Score=55.64 Aligned_cols=93 Identities=13% Similarity=0.209 Sum_probs=64.7
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCC---CcEEEEEcCCCcCCcchHHHHHcC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDY---RKIALFVSSSDATQPGYLLKFLRG 426 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw---~~fSV~I~e~dv~~~~~L~~iL~~ 426 (506)
.+..+.|+.+..++.|......+.-++|||.+| +|||.++.-. ..++++- .+..+.++..|... +.+.|..
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg--~~eiv~~~~~~~~G~lv~~~d~~~---la~~i~~ 396 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG--IPDIIPPDQEGKTGFLYTPGDVDD---CVEKLET 396 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCC--cHhhhhcCCCCCceEEeCCCCHHH---HHHHHHH
Confidence 467788999999999988766678899999999 8999987432 2233332 56667777666543 4333332
Q ss_pred C--CHHHHHHHHHHHhhhcceeEE
Q 010594 427 I--SPAQIREMRRNLVQYSRHFLY 448 (506)
Q Consensus 427 I--s~e~i~~Mr~~l~~v~~~f~Y 448 (506)
+ .++...+|.++..+....|-|
T Consensus 397 ll~~~~~~~~~~~~a~~~~~~fsw 420 (465)
T PLN02871 397 LLADPELRERMGAAAREEVEKWDW 420 (465)
T ss_pred HHhCHHHHHHHHHHHHHHHHhCCH
Confidence 2 577888898888876655433
No 13
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=94.39 E-value=0.2 Score=52.63 Aligned_cols=118 Identities=21% Similarity=0.207 Sum_probs=71.3
Q ss_pred hHHHHHHHHhC---CCCeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCC
Q 010594 323 IRAKLVAELSS---AEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGI 399 (506)
Q Consensus 323 iR~~L~~~~~~---~~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~v 399 (506)
.++++.+++.. .+.+.+... -...++.+.|+.|..++.|.-....+..++|||++|| |||.++.- +..++
T Consensus 266 ~~~~~~~~~~~~~~~~~V~f~G~----v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~ 338 (396)
T cd03818 266 WKQHMLDELGGRLDLSRVHFLGR----VPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREV 338 (396)
T ss_pred HHHHHHHHhhcccCcceEEEeCC----CCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--Cchhh
Confidence 45666665543 333444321 1234667888888888887654444567999999999 88888743 34455
Q ss_pred CCCCcEEEEEcCCCcCCcc-hHHHHHcCCCHHHHHHHHHHHhhhc-ceeEEc
Q 010594 400 LDYRKIALFVSSSDATQPG-YLLKFLRGISPAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 400 lDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
+.-..-.+.++..|...-. .|.++|. .++...+|.++.++.. ++|-|.
T Consensus 339 i~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~l~~~ar~~~~~~fs~~ 388 (396)
T cd03818 339 ITDGENGLLVDFFDPDALAAAVIELLD--DPARRARLRRAARRTALRYDLLS 388 (396)
T ss_pred cccCCceEEcCCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhccHH
Confidence 5544556667766643311 1344443 4677788888777644 335443
No 14
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=93.76 E-value=0.22 Score=49.42 Aligned_cols=92 Identities=16% Similarity=0.322 Sum_probs=57.7
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI-- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I-- 427 (506)
.+..+.+..+.+++.|.-....+..++|||.+|| |||.++.-- ..+.+.- ...+.++.++ .+ +.+.+..+
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~~~~~~-~~~~~~~~~~-~~---~~~~i~~l~~ 344 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVP--WQELIEY-GCGWVVDDDV-DA---LAAALRRALE 344 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCC--HHHHhhc-CceEEeCCCh-HH---HHHHHHHHHh
Confidence 3566778999999999876666788999999997 888877432 2222222 4444554432 22 33333322
Q ss_pred CHHHHHHHHHHHhhh-cceeEEc
Q 010594 428 SPAQIREMRRNLVQY-SRHFLYS 449 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v-~~~f~Y~ 449 (506)
.+++..+|.++..+. .+++.|.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 345 LPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CHHHHHHHHHHHHHHHHHhcCHH
Confidence 347788888877776 5555443
No 15
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=93.66 E-value=0.26 Score=51.51 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=62.0
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGIS 428 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is 428 (506)
.+..+.|+.+..++.|.=....+..+.|||.+|| |||..+.--. .+++.-....+.++..|...-. .|.++|. .
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~~--~e~i~~~~~g~~~~~~d~~~la~~i~~~l~--~ 368 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGGL--PVAVADGETGLLVDGHDPADWADALARLLD--D 368 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCCc--HhhhccCCceEECCCCCHHHHHHHHHHHHh--C
Confidence 4567889999988888654445678999999997 8888874222 2333333455667665654311 1344443 5
Q ss_pred HHHHHHHHHHHhhhcceeEEc
Q 010594 429 PAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
++...+|.++..+..++|-|.
T Consensus 369 ~~~~~~~~~~~~~~~~~fsw~ 389 (405)
T TIGR03449 369 PRTRIRMGAAAVEHAAGFSWA 389 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 677889988888776665554
No 16
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=93.52 E-value=0.42 Score=51.20 Aligned_cols=135 Identities=14% Similarity=0.098 Sum_probs=74.3
Q ss_pred ceEEEeecccccCCCChhHHHHHHHHhC---CCCeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhC
Q 010594 306 STLLFFRGRLKRNAGGKIRAKLVAELSS---AEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSG 382 (506)
Q Consensus 306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~---~~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aG 382 (506)
+.-+.++|+.+...+...+..|.++.++ .+.+.+... -...+..+.|+.|..++.|.=+...+..++|||++|
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~----v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G 348 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVN----APFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG 348 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecC----CCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC
Confidence 4566677764322222233344333322 233444321 124567788999999998876666678999999999
Q ss_pred ceeEEeeCCcccCCCCCCC---CCcEEEEEcCCCcCCcc-hHHHHHcCCCHHHHHHHHHHHhhhcceeEEc
Q 010594 383 CIPVIVSDELELPFEGILD---YRKIALFVSSSDATQPG-YLLKFLRGISPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 383 CIPViisd~~~LPFe~vlD---w~~fSV~I~e~dv~~~~-~L~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
|+||. ++. --|.++++. -..-.+.+. |..+-. .|.++|+. ++++...|+++-.++..+|-+.
T Consensus 349 ~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~-~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 349 LIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSL-SEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred CcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhhCHH
Confidence 96664 442 125555543 222333332 322211 14444443 5666666777777777776554
No 17
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=93.51 E-value=0.39 Score=47.63 Aligned_cols=89 Identities=16% Similarity=0.187 Sum_probs=58.9
Q ss_pred hhHHhccccCcEEEccCC-CCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCC
Q 010594 350 AAAQNGMRRSIFCLNPAG-DTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGI 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~G-ds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~I 427 (506)
.+..+.++.+..++.|.- .......++|||.+| +|||.++.- ...+.++.....+.++..|+.+-. .|.+++.
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~-- 328 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLID-- 328 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHh--
Confidence 567788999999999973 334567899999999 678777642 223344555557777776654311 1333333
Q ss_pred CHHHHHHHHHHHhhhc
Q 010594 428 SPAQIREMRRNLVQYS 443 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~ 443 (506)
.+++..+|+++..+..
T Consensus 329 ~~~~~~~~~~~~~~~~ 344 (359)
T cd03823 329 DPDLLERLRAGIEPPR 344 (359)
T ss_pred ChHHHHHHHHhHHHhh
Confidence 5778888888775543
No 18
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=93.45 E-value=0.24 Score=48.71 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=57.7
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--C
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI--S 428 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s 428 (506)
+..+.|+.+.+++.|......+..++|||.+|| |||.++.-.. .+.+.-....+.++..+..+ +.+.+..+ .
T Consensus 256 ~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~--~~~i~~~~~g~~~~~~~~~~---~~~~i~~l~~~ 329 (359)
T cd03808 256 DVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGC--REAVIDGVNGFLVPPGDAEA---LADAIERLIED 329 (359)
T ss_pred cHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCc--hhhhhcCcceEEECCCCHHH---HHHHHHHHHhC
Confidence 455778999999999876666788999999996 7888764322 23333234456666655433 43443332 4
Q ss_pred HHHHHHHHHHHhhh-ccee
Q 010594 429 PAQIREMRRNLVQY-SRHF 446 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v-~~~f 446 (506)
++...+|.++..+. ..++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~ 348 (359)
T cd03808 330 PELRARMGQAARKRAEEEF 348 (359)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 67777777766554 3443
No 19
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=93.31 E-value=0.15 Score=52.28 Aligned_cols=94 Identities=21% Similarity=0.256 Sum_probs=62.1
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI-- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I-- 427 (506)
.+..+.++.|..++.|.-.......++|||.+|+ |||.++.- ...+.+.-....+.++..+..+ +.+.+..+
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~-Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~---l~~~i~~l~~ 367 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGL-PVVATAVG--GPRDIVVDGVTGLLVDPRDPEA---LAAALRRLLT 367 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCC-CEEECCCC--CHHHHccCCCCeEEeCCCCHHH---HHHHHHHHHh
Confidence 3556778899999999776666778999999995 99998742 2223343334566676655433 33333322
Q ss_pred CHHHHHHHHHHHhhhc-ceeEEc
Q 010594 428 SPAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
.++++.+|.++..+.. ++|-|.
T Consensus 368 ~~~~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 368 DPALRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 4778888888876655 666544
No 20
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=93.15 E-value=0.49 Score=48.16 Aligned_cols=94 Identities=21% Similarity=0.258 Sum_probs=58.8
Q ss_pred hhHHhccccCcEEEccCCCC------CCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHH
Q 010594 350 AAAQNGMRRSIFCLNPAGDT------PSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKF 423 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds------~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~i 423 (506)
.+..+.|..+...+.|.-.+ .....++|||.+|| |||.++.-.. .+.+.-....+.++..|..+ +.+.
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~--~e~i~~~~~g~~~~~~d~~~---l~~~ 329 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGI--PEAVEDGETGLLVPEGDVAA---LAAA 329 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCc--hhheecCCeeEEECCCCHHH---HHHH
Confidence 45667788888888775321 23578999999997 9999886432 23333345667777666543 4333
Q ss_pred HcCC--CHHHHHHHHHHHhhhc-ceeEEc
Q 010594 424 LRGI--SPAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 424 L~~I--s~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
|..+ .++...+|.++..+.. ++|-|.
T Consensus 330 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 330 LGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 3322 4666778887776543 455443
No 21
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=92.87 E-value=0.27 Score=49.12 Aligned_cols=92 Identities=18% Similarity=0.255 Sum_probs=60.8
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcC-C-
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRG-I- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~-I- 427 (506)
.+..+.++.+.+++.|.-....+..++|||.+|| |||.++.-. ..+.++ +..+.++..+..+ +.+.|.. +
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~--~~e~~~--~~~~~~~~~~~~~---~~~~i~~l~~ 335 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISS--LPEVAG--DAALYFDPLDPEA---LAAAIERLLE 335 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCC--ccceec--CceeeeCCCCHHH---HHHHHHHHhc
Confidence 4567889999999998755445677999999997 777776422 223332 3455566555443 4444444 2
Q ss_pred CHHHHHHHHHHHhhhcceeEEc
Q 010594 428 SPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
.++...+|.++.+++...+-|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 336 DPALREELRERGLARAKRFSWE 357 (365)
T ss_pred CHHHHHHHHHHHHHHHHhCCHH
Confidence 5777888888887777766555
No 22
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=92.66 E-value=0.45 Score=47.30 Aligned_cols=92 Identities=15% Similarity=0.274 Sum_probs=58.6
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGIS 428 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is 428 (506)
.+..+.|+.+.+.+.|......+..++|||.+|+ |||..+.-. +.+.+.-....+.++..+. +-. .|.+++. .
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~--~ 343 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPG--LPDLVADGENGFLFPPGDE-ALAEALLRLLQ--D 343 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCC--hhhheecCceeEEeCCCCH-HHHHHHHHHHh--C
Confidence 4667889999999999876666788999999987 666665322 2333333345556665543 200 1333333 3
Q ss_pred HHHHHHHHHHHhhhcceeE
Q 010594 429 PAQIREMRRNLVQYSRHFL 447 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~~~f~ 447 (506)
++..++|+++.++...++.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 344 PELRRRLSKNAEESAEKFS 362 (374)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 5566788888877666544
No 23
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=92.57 E-value=0.67 Score=45.28 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=50.1
Q ss_pred HHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcch-HHHHHcCC-CH
Q 010594 352 AQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGY-LLKFLRGI-SP 429 (506)
Q Consensus 352 ~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~-L~~iL~~I-s~ 429 (506)
..+.+..+.++++|.-....+..++|||.+|| |||.+|.-. ..+++.-....+.++..+...... +..++... .+
T Consensus 257 ~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 257 PYPYLKAADLFVLSSRYEGFPNVLLEAMALGT-PVVATDCPG--PREILEDGENGLLVPVGDEAALAAAALALLDLLLDP 333 (353)
T ss_pred HHHHHHhCCEEEeCcccCCCCcHHHHHHHhCC-CEEEcCCCC--hHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCCh
Confidence 45678899999999766556778999999999 556665432 223344345566677665433100 12222222 24
Q ss_pred HHHHHHHH
Q 010594 430 AQIREMRR 437 (506)
Q Consensus 430 e~i~~Mr~ 437 (506)
+...+|.+
T Consensus 334 ~~~~~~~~ 341 (353)
T cd03811 334 ELRERLAA 341 (353)
T ss_pred HHHHHHHH
Confidence 55666666
No 24
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.48 E-value=0.29 Score=49.85 Aligned_cols=93 Identities=13% Similarity=0.225 Sum_probs=60.8
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--C
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI--S 428 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s 428 (506)
+..+.|+.+..++.|.-.......+.|||.+| +|||.++.-. ..+++.-..-...++..|..+ +.+.+..+ .
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~---l~~~i~~l~~~ 336 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGG--IPEVVKHGETGFLVDVGDVEA---MAEYALSLLED 336 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCC--chhhhcCCCceEEcCCCCHHH---HHHHHHHHHhC
Confidence 46678999999999975555577899999999 6888887543 233443333345566555433 33333222 5
Q ss_pred HHHHHHHHHHHhhh-cceeEEc
Q 010594 429 PAQIREMRRNLVQY-SRHFLYS 449 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v-~~~f~Y~ 449 (506)
++.+.+|+++..+. ..+|-|.
T Consensus 337 ~~~~~~~~~~~~~~~~~~fs~~ 358 (371)
T cd04962 337 DELWQEFSRAARNRAAERFDSE 358 (371)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 77888999988876 4554443
No 25
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=92.43 E-value=0.79 Score=46.01 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=57.3
Q ss_pred hhHHhccccCcEEEccCCC------CCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHH
Q 010594 350 AAAQNGMRRSIFCLNPAGD------TPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKF 423 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gd------s~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~i 423 (506)
.+..+.++++.+++.|... ......++|||.+||-.| .++.-. ..+.+.-..-...+++.+..+ +.+.
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi-~~~~~~--~~~~i~~~~~g~~~~~~~~~~---l~~~ 320 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVI-STDVSG--IPELVEDGETGLLVPPGDPEA---LADA 320 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEE-ecCCCC--cchhhhCCCceEEeCCCCHHH---HHHH
Confidence 4667888999999998664 335788999999998554 554322 223333333455666555433 4333
Q ss_pred HcCC--CHHHHHHHHHHHhhhc-ceeEEc
Q 010594 424 LRGI--SPAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 424 L~~I--s~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
|..+ .+++..+|.++..+.. .+|-|.
T Consensus 321 i~~~~~~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 321 IERLLDDPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 3332 4666788888776543 445443
No 26
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=92.37 E-value=0.34 Score=48.85 Aligned_cols=93 Identities=18% Similarity=0.164 Sum_probs=61.8
Q ss_pred hhHHhccccCcEEEccC-CCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHH---c
Q 010594 350 AAAQNGMRRSIFCLNPA-GDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFL---R 425 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~-Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL---~ 425 (506)
.+..+.|+.|..++.|. -.......++|||++|| |||..+.- +..+.+.-....+.++..|... +.+.| .
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~~~~~---l~~~i~~~~ 328 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHG--GARETVRPGETGLLVPPGDAEA---LAQALDQIL 328 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCC--CcHHHHhCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 35667889999999887 33334678999999999 88887632 3344454444566666666544 54444 2
Q ss_pred CCCHHHHHHHHHHHhhhc-ceeEE
Q 010594 426 GISPAQIREMRRNLVQYS-RHFLY 448 (506)
Q Consensus 426 ~Is~e~i~~Mr~~l~~v~-~~f~Y 448 (506)
..++++..+|.++.++.. .+|.|
T Consensus 329 ~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 329 SLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred hhCHHHHHHHHHHHHHHHHHhhhh
Confidence 236888888988877754 44444
No 27
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=92.13 E-value=0.54 Score=48.47 Aligned_cols=93 Identities=19% Similarity=0.181 Sum_probs=59.6
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--C
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI--S 428 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s 428 (506)
+..+.|+.+.+++.|.-.......++|||.+|+ |||.+|.-. ..+++.-......++..|..+ +.+.|..+ .
T Consensus 265 ~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g--~~e~i~~~~~g~~~~~~d~~~---la~~i~~l~~~ 338 (374)
T TIGR03088 265 DVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG--NPELVQHGVTGALVPPGDAVA---LARALQPYVSD 338 (374)
T ss_pred CHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC--cHHHhcCCCceEEeCCCCHHH---HHHHHHHHHhC
Confidence 456778888888888655556778999999996 999988532 233444445566777666543 44433332 4
Q ss_pred HHHHHHHHHHHhhhc-ceeEEc
Q 010594 429 PAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
+++...|.++..+.. .+|-|.
T Consensus 339 ~~~~~~~~~~a~~~~~~~fs~~ 360 (374)
T TIGR03088 339 PAARRAHGAAGRARAEQQFSIN 360 (374)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 566677766665543 455444
No 28
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=91.56 E-value=0.16 Score=52.62 Aligned_cols=88 Identities=22% Similarity=0.308 Sum_probs=61.4
Q ss_pred hhHHhccccCcEEEccCCCCC-----------CCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc
Q 010594 350 AAAQNGMRRSIFCLNPAGDTP-----------SSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG 418 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~-----------ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~ 418 (506)
++..+.|+. .|+|++.+++- .-..++++|++|+ |||.++.-.++ +.+.-....+.++ ++.+
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-PVI~~~~~~~~--~~V~~~~~G~~v~--~~~e-- 289 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-PVIVWSKAAIA--DFIVENGLGFVVD--SLEE-- 289 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-CEEECCCccHH--HHHHhCCceEEeC--CHHH--
Confidence 344555655 88998887611 1234888999886 99998764333 3343355666665 3323
Q ss_pred hHHHHHcCCCHHHHHHHHHHHhhhccee
Q 010594 419 YLLKFLRGISPAQIREMRRNLVQYSRHF 446 (506)
Q Consensus 419 ~L~~iL~~Is~e~i~~Mr~~l~~v~~~f 446 (506)
+.+.|..++++++.+|+++.+++.+.+
T Consensus 290 -l~~~l~~~~~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 290 -LPEIIDNITEEEYQEMVENVKKISKLL 316 (333)
T ss_pred -HHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999988765
No 29
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=91.03 E-value=1.3 Score=47.16 Aligned_cols=92 Identities=16% Similarity=0.250 Sum_probs=61.1
Q ss_pred hhHHhccccCcEEEccCC-------CCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHH
Q 010594 350 AAAQNGMRRSIFCLNPAG-------DTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLK 422 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~G-------ds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~ 422 (506)
.+..+.|+.+..++.|.= +| ....++|||.+|+ |||.++.--.| +++.-..-.+.++..|... +.+
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg-~p~~llEAma~G~-PVI~t~~~g~~--E~v~~~~~G~lv~~~d~~~---la~ 362 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEG-IPVALMEAMAVGI-PVVSTLHSGIP--ELVEADKSGWLVPENDAQA---LAQ 362 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccC-ccHHHHHHHhCCC-CEEEeCCCCch--hhhcCCCceEEeCCCCHHH---HHH
Confidence 466788999999998852 22 3467999999996 99998753332 3444345566777777554 544
Q ss_pred HHcCC---CHHHHHHHHHHHhhh-cceeEE
Q 010594 423 FLRGI---SPAQIREMRRNLVQY-SRHFLY 448 (506)
Q Consensus 423 iL~~I---s~e~i~~Mr~~l~~v-~~~f~Y 448 (506)
.+..+ ++++..+|.++.++. ..+|-|
T Consensus 363 ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 363 RLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 44433 677888888887654 344443
No 30
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=90.73 E-value=2 Score=44.31 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=60.1
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCc---chHHHHHcC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQP---GYLLKFLRG 426 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~---~~L~~iL~~ 426 (506)
.+..+.|+.|..++.|.-.......++|||.+|| |||.++.-.. .+++.-....+.++..+.... ..+.+.|..
T Consensus 272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~--~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGI--PEVVVDGETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCH--HHHhhCCCceEEcCCCCCcccchHHHHHHHHHH
Confidence 4567788999999998765556678899999999 8998874322 233333334555665554100 114333333
Q ss_pred C--CHHHHHHHHHHHhhhc-ceeEEc
Q 010594 427 I--SPAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 427 I--s~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
+ .+++..+|.++..+.. ++|-|.
T Consensus 349 l~~~~~~~~~~~~~a~~~~~~~~s~~ 374 (388)
T TIGR02149 349 LLADPELAKKMGIAGRKRAEEEFSWG 374 (388)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 2 5777888888776643 444443
No 31
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=90.51 E-value=0.55 Score=47.99 Aligned_cols=62 Identities=16% Similarity=0.120 Sum_probs=41.4
Q ss_pred hhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCc
Q 010594 349 KAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDA 414 (506)
Q Consensus 349 ~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv 414 (506)
..+..+.++.+..++.|.-.+ .+..++|||++|| |||..+.-..+ +.+.-....+.++..+.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~e~-~g~~~~Eama~G~-Pvi~~~~~~~~--e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 252 DEELRDLYARARAFLFPAEED-FGIVPVEAMASGT-PVIAYGKGGAL--ETVIDGVTGILFEEQTV 313 (351)
T ss_pred HHHHHHHHHhCCEEEECCcCC-CCchHHHHHHcCC-CEEEeCCCCCc--ceeeCCCCEEEeCCCCH
Confidence 345778899999999886533 4567899999998 99988743222 22322344666665554
No 32
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=90.04 E-value=0.74 Score=45.30 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=43.4
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDAT 415 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~ 415 (506)
.+..+.+.++.++++|......+..++|||.+|| |||.++.-.. .+.+.-....+.+...+..
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~~--~~~~~~~~~g~~~~~~~~~ 332 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGI--PEIITDGENGLLVPPGDPE 332 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCCh--HHHhcCCcceeEECCCCHH
Confidence 4567889999999999877667888999999999 6777764221 2223333434566655543
No 33
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=89.24 E-value=1.9 Score=44.76 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=58.5
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCCH
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISP 429 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is~ 429 (506)
......++.+..++.|.........+.|||++| +|||.++.-.++ +.+.-....+.++..+... ..|.+.|. .+
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a-~~i~~ll~--~~ 338 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAA-VRILYLLR--DP 338 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHH-HHHHHHHc--CH
Confidence 456677888999998876655678999999999 599998754333 2232223333444222110 01444444 47
Q ss_pred HHHHHHHHHHhhh-cceeEEc
Q 010594 430 AQIREMRRNLVQY-SRHFLYS 449 (506)
Q Consensus 430 e~i~~Mr~~l~~v-~~~f~Y~ 449 (506)
+...+|.++..+. ..+|.|.
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 339 ELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHH
Confidence 7788998887774 3555554
No 34
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=88.68 E-value=1.8 Score=44.62 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=55.8
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCCH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGISP 429 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~ 429 (506)
...+.++.+.+++.|......+..++|||.+| +|||.++.-. +-+-+.+.. -.+.++. |...-. .|.+++. .+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~-~~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~--~~ 365 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG-PLETVVDGE-TGFLCEP-TPEEFAEAMLKLAN--DP 365 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC-cHHHhccCC-ceEEeCC-CHHHHHHHHHHHHh--Ch
Confidence 44577889999998877665677899999999 5777776422 222233432 3444543 432210 1333333 35
Q ss_pred HHHHHHHHHHhhh-cceeEEc
Q 010594 430 AQIREMRRNLVQY-SRHFLYS 449 (506)
Q Consensus 430 e~i~~Mr~~l~~v-~~~f~Y~ 449 (506)
+...+|+++.++. ..+|.|.
T Consensus 366 ~~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 366 DLADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 6788888877663 4555554
No 35
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=88.64 E-value=0.89 Score=45.81 Aligned_cols=89 Identities=13% Similarity=0.131 Sum_probs=57.0
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGIS 428 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is 428 (506)
....+.|+.|.+.+.|......+..++|||.+|| |||..+.- +..+.+.-..-.+.++..+...-. .|.+++. .
T Consensus 256 ~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~-PvI~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~--~ 330 (365)
T cd03825 256 ESLALIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVG--GIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLA--D 330 (365)
T ss_pred HHHHHHHHhCCEEEeccccccccHHHHHHHhcCC-CEEEecCC--CChhheeCCCceEEeCCCCHHHHHHHHHHHHh--C
Confidence 3456789999999999887667889999999998 56666532 222333333445566655543311 1333333 4
Q ss_pred HHHHHHHHHHHhhhc
Q 010594 429 PAQIREMRRNLVQYS 443 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~ 443 (506)
+++..+|.++..+..
T Consensus 331 ~~~~~~~~~~~~~~~ 345 (365)
T cd03825 331 PDEREELGEAARELA 345 (365)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666788888776644
No 36
>PRK10307 putative glycosyl transferase; Provisional
Probab=88.56 E-value=1.2 Score=47.00 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=60.0
Q ss_pred hhHHhccccCcEEEccCCCCC----CCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHc
Q 010594 350 AAAQNGMRRSIFCLNPAGDTP----SSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLR 425 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~----ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~ 425 (506)
....+.++.+..++.|.=... ....++|+|++| +|||.++.--....+++. .-.+.++..|..+ +.+.|.
T Consensus 295 ~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~---la~~i~ 368 (412)
T PRK10307 295 DRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEA---LVAAIA 368 (412)
T ss_pred HHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHH---HHHHHH
Confidence 456678888888887753322 133589999999 589888642222234444 3456666666544 555554
Q ss_pred CC--CHHHHHHHHHHHhhhc-ceeEEcc
Q 010594 426 GI--SPAQIREMRRNLVQYS-RHFLYSS 450 (506)
Q Consensus 426 ~I--s~e~i~~Mr~~l~~v~-~~f~Y~~ 450 (506)
.+ .++...+|+++..+.. .+|-|..
T Consensus 369 ~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 369 ALARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 43 4677888988887744 4676663
No 37
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=87.89 E-value=2.5 Score=42.59 Aligned_cols=85 Identities=18% Similarity=0.292 Sum_probs=49.6
Q ss_pred hhHHhccccCcEEEccCCC-CCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCC-cCCcchHHHHHcCC
Q 010594 350 AAAQNGMRRSIFCLNPAGD-TPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSD-ATQPGYLLKFLRGI 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gd-s~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~d-v~~~~~L~~iL~~I 427 (506)
.+..+.+..+..++.|.-. ......++|||.+|| |||.++.- +..+++.-. ...++..+ +.+ .|.+.++
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~--g~~~~~~~~l~~--~i~~l~~-- 329 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGDK--AIYFKVGDDLAS--LLEELEA-- 329 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecCC--eeEecCchHHHH--HHHHHHh--
Confidence 3456677777777777654 445677999999999 78877642 223333332 23334333 211 1333333
Q ss_pred CHHHHHHHHHHHhhhc
Q 010594 428 SPAQIREMRRNLVQYS 443 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~ 443 (506)
.++.+.+|.++..+..
T Consensus 330 ~~~~~~~~~~~~~~~~ 345 (363)
T cd04955 330 DPEEVSAMAKAARERI 345 (363)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 3467777877766543
No 38
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=87.68 E-value=0.66 Score=45.78 Aligned_cols=91 Identities=13% Similarity=0.173 Sum_probs=56.3
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--C
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI--S 428 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s 428 (506)
+..+.|+.+.+++.|......+..++|||.+|| |||.++.-.. .+.+.- ..+.++..+..+ +.+.+..+ .
T Consensus 261 ~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~--~e~~~~--~g~~~~~~~~~~---l~~~i~~l~~~ 332 (365)
T cd03807 261 DVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN--AELVGD--TGFLVPPGDPEA---LAEAIEALLAD 332 (365)
T ss_pred cHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh--HHHhhc--CCEEeCCCCHHH---HHHHHHHHHhC
Confidence 456788999999999887667788999999996 8888764221 122211 345565555333 43333332 3
Q ss_pred HHHHHHHHHHHhhhc-ceeEEc
Q 010594 429 PAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
+++..+|.++..+.. ++|-|.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 333 PALRQALGEAARERIEENFSIE 354 (365)
T ss_pred hHHHHHHHHHHHHHHHHhCCHH
Confidence 467777777666543 445444
No 39
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=87.36 E-value=2.1 Score=45.61 Aligned_cols=123 Identities=14% Similarity=0.213 Sum_probs=69.7
Q ss_pred ceEEEeecccccCCCChhHHHHHHHHhCC--CCeEEEcCCCCCcchhhHHhccccCcEEEccC----CCCCCCchHHHHH
Q 010594 306 STLLFFRGRLKRNAGGKIRAKLVAELSSA--EGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPA----GDTPSSARLFDAI 379 (506)
Q Consensus 306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~--~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~----Gds~ts~RlfDAi 379 (506)
.+.+.+.|. |..++.+.++.+.. .++.+..+.. ...++.+.|+.+..++.|. |.+ ....++|||
T Consensus 269 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~~~~~~g~~---~~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eam 338 (415)
T cd03816 269 KLLCIITGK------GPLKEKYLERIKELKLKKVTIRTPWL---SAEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMF 338 (415)
T ss_pred CEEEEEEec------CccHHHHHHHHHHcCCCcEEEEcCcC---CHHHHHHHHHhCCEEEEccccccccC-CcHHHHHHH
Confidence 366677773 33455655555432 3444433211 2356777888888887542 333 356799999
Q ss_pred HhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcC-CCHHHHHHHHHHHhhhc
Q 010594 380 VSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRG-ISPAQIREMRRNLVQYS 443 (506)
Q Consensus 380 ~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~-Is~e~i~~Mr~~l~~v~ 443 (506)
++|+ |||.++.-.. .+++.-..-.+.++ |..+-. .|.++|.. .++++..+|.++.++..
T Consensus 339 a~G~-PVI~s~~~~~--~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 339 GCGL-PVCALDFKCI--DELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HcCC-CEEEeCCCCH--HHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 9999 9999875322 23333233344442 332211 14444443 12788899988887765
No 40
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=86.64 E-value=3 Score=41.88 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=52.7
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcC---C
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRG---I 427 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~---I 427 (506)
+..+.|+.+.+.+.|.........++|||.+|| |||.+|.-. ..+.+.-. ...++..|..+ +.+.+.. .
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~--g~~~~~~~~~~---~~~~i~~ll~~ 326 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGG--VREVVGDS--GLIVPISDPEA---LANKIDEILKM 326 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCC--hhhEecCC--ceEeCCCCHHH---HHHHHHHHHhC
Confidence 445678889998888876656788999999999 888887421 12222212 33444445433 3333322 3
Q ss_pred CHHHHHHHHHHHhhhcceeEE
Q 010594 428 SPAQIREMRRNLVQYSRHFLY 448 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~~~f~Y 448 (506)
+++....|.++-..+.+.|-|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 327 SGEERDIIGARRERIVKKFSI 347 (360)
T ss_pred CHHHHHHHHHHHHHHHHhcCH
Confidence 555566666553334444443
No 41
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=86.13 E-value=2.3 Score=42.61 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=57.1
Q ss_pred hhHHhccccCcEEEccCCC--CCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC
Q 010594 350 AAAQNGMRRSIFCLNPAGD--TPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gd--s~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I 427 (506)
....+.++.+..++.|.-. ......+.|||.+|+ |||.++.-..+ +.+.+.......++..|..+ +.+.+..+
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~-Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~---~~~~i~~l 329 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGK-PVISTEIGTGG-SYVNLHGVTGLVVPPGDPAA---LAEAIRRL 329 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCC-CEEecCCCCch-hHHhhCCCceEEeCCCCHHH---HHHHHHHH
Confidence 4566788889999988521 223567999999985 77777643221 11112245556666655443 33333322
Q ss_pred --CHHHHHHHHHHHhhhc-ceeEE
Q 010594 428 --SPAQIREMRRNLVQYS-RHFLY 448 (506)
Q Consensus 428 --s~e~i~~Mr~~l~~v~-~~f~Y 448 (506)
.+++..+|+++..+.. ++|.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 330 LEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred HHCHHHHHHHHHHHHHHHHHhcch
Confidence 6788899999887754 55544
No 42
>PLN02949 transferase, transferring glycosyl groups
Probab=85.79 E-value=2.6 Score=46.13 Aligned_cols=96 Identities=14% Similarity=0.157 Sum_probs=54.7
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCC-CCC-cEEEEEcCCCcCCcc-hHHHHHcC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGIL-DYR-KIALFVSSSDATQPG-YLLKFLRG 426 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vl-Dw~-~fSV~I~e~dv~~~~-~L~~iL~~ 426 (506)
.+..+.++++.+++.|.-+.....-+.|||++||+||....+ =|-++++ ++. .-.-++.+ ++..-. .|.+++..
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~~-~~~~la~ai~~ll~~ 422 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLAT-TVEEYADAILEVLRM 422 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccCC-CHHHHHHHHHHHHhC
Confidence 456677888998888776665678899999999877765432 1322222 111 01111211 322200 13333332
Q ss_pred CCHHHHHHHHHHHhhhcceeEEc
Q 010594 427 ISPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 427 Is~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
++++..+|+++.++...+|-+.
T Consensus 423 -~~~~r~~m~~~ar~~~~~FS~e 444 (463)
T PLN02949 423 -RETERLEIAAAARKRANRFSEQ 444 (463)
T ss_pred -CHHHHHHHHHHHHHHHHHcCHH
Confidence 5677888988887766654443
No 43
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=85.66 E-value=4.1 Score=43.45 Aligned_cols=122 Identities=13% Similarity=0.148 Sum_probs=75.2
Q ss_pred CCCceEEEeecccccCCCChhHHHHHHHHhCCCCeEEEcCCC----CCcchhhHHhccccCcEEEccCCC---CCCCchH
Q 010594 303 SKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTA----GEVGKAAAQNGMRRSIFCLNPAGD---TPSSARL 375 (506)
Q Consensus 303 ~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~i~~~~~----~~~~~~~~~~~m~~S~FCL~P~Gd---s~ts~Rl 375 (506)
.+++..+.+.-... ...-|.++++++...-.+.+...+. .........+.+..-||=|.-.-. .+-+-.|
T Consensus 194 ~k~~~~aw~vSnc~---~~~~R~~~~~~L~k~l~iD~YG~c~~~~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKf 270 (372)
T KOG2619|consen 194 AKTKLAAWLVSNCI---PRSARLDYYKELMKHLEIDSYGECLRKNANRDPSDCLLETLSHYKFYLAFENSNCEDYVTEKF 270 (372)
T ss_pred cccceeeeeccccC---cchHHHHHHHHHHhhCceeeccccccccccCCCCCcceeecccceEEEEecccCCcccccHHH
Confidence 44555555555443 3467888887777653333322111 112233556788899999975432 3446889
Q ss_pred HHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCCHHHHH
Q 010594 376 FDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIR 433 (506)
Q Consensus 376 fDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is~e~i~ 433 (506)
|-|+.+|.|||+++......|- + .+- +|.-+|...+..|.+.|+.+..++.+
T Consensus 271 w~al~~gsVPVvlg~~n~e~fv---P-~~S--fI~vdDF~s~~ela~ylk~L~~n~~~ 322 (372)
T KOG2619|consen 271 WNALDAGSVPVVLGPPNYENFV---P-PDS--FIHVDDFQSPQELAAYLKKLDKNPAA 322 (372)
T ss_pred HhhhhcCcccEEECCccccccC---C-Ccc--eEehhhcCCHHHHHHHHHHhhcCHHH
Confidence 9999999999999986544442 2 222 45556776666688888887544433
No 44
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=84.93 E-value=2 Score=45.10 Aligned_cols=91 Identities=20% Similarity=0.334 Sum_probs=54.2
Q ss_pred hHHhccccCcEEEccC--CCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCC
Q 010594 351 AAQNGMRRSIFCLNPA--GDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGI 427 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~--Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~I 427 (506)
+....++.+..++.|. |.| ....+.|||.+|| |||.++.- .+.+..-..-.+.++ .+..+-. .|.++|.
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG-~~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~-- 361 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARG-IQNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLA-- 361 (397)
T ss_pred CHHHHHHhCCEEEecccccCC-cccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHc--
Confidence 3456688888888885 444 3557999999998 99998742 122211122345555 4433211 1333333
Q ss_pred CHHHHHHHHHHHhhhc-ceeEEc
Q 010594 428 SPAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
.++...+|.++.++.. .+|-|.
T Consensus 362 ~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 362 NPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 4677788888877643 555554
No 45
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=84.30 E-value=0.85 Score=37.73 Aligned_cols=81 Identities=16% Similarity=0.279 Sum_probs=44.7
Q ss_pred EEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEc-CCCcCCcchHHHHHcCCCHHHHHHHHHHHh
Q 010594 362 CLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVS-SSDATQPGYLLKFLRGISPAQIREMRRNLV 440 (506)
Q Consensus 362 CL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~-e~dv~~~~~L~~iL~~Is~e~i~~Mr~~l~ 440 (506)
||.|.-.+..+.|+||+|++|++.|.- +.-. +...++..+-.+.+. .+++.+ .|...|+ .+++.++|.++..
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~~-~~~~--~~~~~~~~~~~~~~~~~~el~~--~i~~ll~--~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVISD-DSPG--LREIFEDGEHIITYNDPEELAE--KIEYLLE--NPEERRRIAKNAR 74 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEEEC-ChHH--HHHHcCCCCeEEEECCHHHHHH--HHHHHHC--CHHHHHHHHHHHH
Confidence 344433333577999999999954444 3311 122234454455564 223222 1333344 7889999988886
Q ss_pred hhcc-eeEEc
Q 010594 441 QYSR-HFLYS 449 (506)
Q Consensus 441 ~v~~-~f~Y~ 449 (506)
+... ++.|.
T Consensus 75 ~~v~~~~t~~ 84 (92)
T PF13524_consen 75 ERVLKRHTWE 84 (92)
T ss_pred HHHHHhCCHH
Confidence 6443 55544
No 46
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=83.71 E-value=1 Score=46.35 Aligned_cols=95 Identities=15% Similarity=0.230 Sum_probs=59.7
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCCH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGISP 429 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~ 429 (506)
...+.++++..++.|.-.......+.|||.+|| |||..+--.-| .+.+.-.+-.+.++..|..+-. .|..+|. .+
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~--~~ 346 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLN--DP 346 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHc--CH
Confidence 345678889999988755445678999999999 78776521111 1223323445666655543311 1334444 56
Q ss_pred HHHHHHHHHHhhhcceeEEc
Q 010594 430 AQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 430 e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
+.+.+|+++..+....|.|.
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~ 366 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEE 366 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 78899999888776665544
No 47
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=83.02 E-value=5.7 Score=41.79 Aligned_cols=94 Identities=7% Similarity=0.125 Sum_probs=54.8
Q ss_pred hhHHhccccCcEEEccCCC-CCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEE-EEcCCCcCCcchHHHHHcC-
Q 010594 350 AAAQNGMRRSIFCLNPAGD-TPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIAL-FVSSSDATQPGYLLKFLRG- 426 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gd-s~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV-~I~e~dv~~~~~L~~iL~~- 426 (506)
.+..+.|+.|..++.|... .....-++|||++| +|||.++.--.| +++.-..-.. .++..|... +.+.|..
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~~--Eiv~~~~~G~~l~~~~d~~~---la~~I~~l 341 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGIT--EFVLEGITGYHLAEPMTSDS---IISDINRT 341 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCcH--hhcccCCceEEEeCCCCHHH---HHHHHHHH
Confidence 4567789999999999864 33467899999999 699998753222 2222222222 344444332 3333322
Q ss_pred CCHHHHHHHHHHHhh-hcceeEEc
Q 010594 427 ISPAQIREMRRNLVQ-YSRHFLYS 449 (506)
Q Consensus 427 Is~e~i~~Mr~~l~~-v~~~f~Y~ 449 (506)
+...+..+|.++.++ +..+|-|.
T Consensus 342 l~d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 342 LADPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred HcCHHHHHHHHHHHHHHHHhCCHH
Confidence 233345677777664 44566555
No 48
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=82.54 E-value=2.2 Score=42.53 Aligned_cols=42 Identities=21% Similarity=0.169 Sum_probs=33.0
Q ss_pred hhHHhccccCcEEEccCCC-CCCCchHHHHHHhCceeEEeeCCc
Q 010594 350 AAAQNGMRRSIFCLNPAGD-TPSSARLFDAIVSGCIPVIVSDEL 392 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gd-s~ts~RlfDAi~aGCIPViisd~~ 392 (506)
.+..+.++.+.+++.|.-. ......++|||++|+ |||.+|.-
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~ 277 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRG 277 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCC
Confidence 3456788999999999742 334678999999997 99998853
No 49
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=81.45 E-value=9.3 Score=39.52 Aligned_cols=91 Identities=18% Similarity=0.151 Sum_probs=50.9
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCCH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGISP 429 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~ 429 (506)
.+.+.++.+..++.|.........++|||++| +|||.++...-+- +++.-..-.+.++..|..+-. .|.++|..-..
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g~~-eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSGPR-DIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCChH-HHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 34556777888888876655678999999999 5888887222222 333323344555665654411 13333333221
Q ss_pred HHHHHHHHHHhhhc
Q 010594 430 AQIREMRRNLVQYS 443 (506)
Q Consensus 430 e~i~~Mr~~l~~v~ 443 (506)
....++++++.++.
T Consensus 328 ~~~~~~~~~~~~~~ 341 (359)
T PRK09922 328 YQHDAIPNSIERFY 341 (359)
T ss_pred CCHHHHHHHHHHhh
Confidence 12455555554443
No 50
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=81.09 E-value=0.6 Score=40.78 Aligned_cols=56 Identities=25% Similarity=0.360 Sum_probs=32.7
Q ss_pred hhHHhccccCcEEEccCC-CCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEE
Q 010594 350 AAAQNGMRRSIFCLNPAG-DTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFV 409 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~G-ds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I 409 (506)
.++.+.++++.+++.|.- +...+..++|+|.+|| |||.++. ++.....-....+.+
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-pvi~~~~---~~~~~~~~~~~~~~~ 118 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-PVIASDN---GAEGIVEEDGCGVLV 118 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH---HCHCHS---SEEEE-
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-CEEECCc---chhhheeecCCeEEE
Confidence 368888999999999874 2235689999999998 5555654 343333334555666
No 51
>PRK14098 glycogen synthase; Provisional
Probab=79.11 E-value=6.6 Score=43.22 Aligned_cols=84 Identities=14% Similarity=0.076 Sum_probs=52.1
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCC---CcEEEEEcCCCcCCcchHHHHHcC-
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDY---RKIALFVSSSDATQPGYLLKFLRG- 426 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw---~~fSV~I~e~dv~~~~~L~~iL~~- 426 (506)
...+.++.+.+++.|.-..+......|||.+||+||+...+- ++ +-+.|+ ..-.+.++..|... +.+.|..
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~-d~v~~~~~~~~~G~l~~~~d~~~---la~ai~~~ 448 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IV-ETIEEVSEDKGSGFIFHDYTPEA---LVAKLGEA 448 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-Cc-eeeecCCCCCCceeEeCCCCHHH---HHHHHHHH
Confidence 456788999999999877777888999999999999865421 11 111121 23345566655433 4443332
Q ss_pred ---C-CHHHHHHHHHHH
Q 010594 427 ---I-SPAQIREMRRNL 439 (506)
Q Consensus 427 ---I-s~e~i~~Mr~~l 439 (506)
. .++++.+|+++.
T Consensus 449 l~~~~~~~~~~~~~~~~ 465 (489)
T PRK14098 449 LALYHDEERWEELVLEA 465 (489)
T ss_pred HHHHcCHHHHHHHHHHH
Confidence 1 356666666543
No 52
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=78.87 E-value=8.4 Score=38.76 Aligned_cols=40 Identities=25% Similarity=0.214 Sum_probs=32.5
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE 391 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~ 391 (506)
+..+.+..+.++++|.-.......++|||.+|| |||.++.
T Consensus 259 ~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~-PvI~s~~ 298 (358)
T cd03812 259 DVPELLQAMDVFLFPSLYEGLPLVLIEAQASGL-PCILSDT 298 (358)
T ss_pred CHHHHHHhcCEEEecccccCCCHHHHHHHHhCC-CEEEEcC
Confidence 456788999999999876667889999999999 5556653
No 53
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=78.06 E-value=3.2 Score=44.88 Aligned_cols=84 Identities=19% Similarity=0.252 Sum_probs=52.3
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCC-----cEEEEEcCCCcCCcchHHHHHc
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYR-----KIALFVSSSDATQPGYLLKFLR 425 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~-----~fSV~I~e~dv~~~~~L~~iL~ 425 (506)
...+.++.+.+++.|.-..+......|||.+||.||. ++.--++ +-+.|.+ .-.+.++..+... +.+.|.
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~---la~~i~ 432 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGA---LLAALS 432 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCcc-ceEecCCCCCCCCceEEeCCCCHHH---HHHHHH
Confidence 4557889999999998887778889999999996654 4432221 1122321 4456666655433 433333
Q ss_pred CC------CHHHHHHHHHHH
Q 010594 426 GI------SPAQIREMRRNL 439 (506)
Q Consensus 426 ~I------s~e~i~~Mr~~l 439 (506)
.+ .++.+.+|.++.
T Consensus 433 ~~l~~~~~~~~~~~~~~~~~ 452 (473)
T TIGR02095 433 RALRLYRQDPSLWEALQKNA 452 (473)
T ss_pred HHHHHHhcCHHHHHHHHHHH
Confidence 21 456677777765
No 54
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=77.01 E-value=18 Score=38.92 Aligned_cols=85 Identities=24% Similarity=0.366 Sum_probs=51.8
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCC-----cEEEEEcCCCcCCcchHHHHHc
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYR-----KIALFVSSSDATQPGYLLKFLR 425 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~-----~fSV~I~e~dv~~~~~L~~iL~ 425 (506)
...+.++.+.+.+.|.-..+......|||.+||.||.-..+ -++ +-+.|.. .-.+.++..+... +.+.+.
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g-g~~-e~v~~~~~~~~~~~G~~~~~~~~~~---l~~~i~ 437 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG-GLA-DTVIDYNEDTGEGTGFVFEGYNADA---LLAALR 437 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC-Ccc-ceEeCCcCCCCCCCeEEeCCCCHHH---HHHHHH
Confidence 34567889999999987777888899999999988754322 111 1122332 1345566555432 433333
Q ss_pred CC-----CHHHHHHHHHHHh
Q 010594 426 GI-----SPAQIREMRRNLV 440 (506)
Q Consensus 426 ~I-----s~e~i~~Mr~~l~ 440 (506)
.+ .+++..+|.++..
T Consensus 438 ~~l~~~~~~~~~~~~~~~~~ 457 (476)
T cd03791 438 RALALYRDPEAWRKLQRNAM 457 (476)
T ss_pred HHHHHHcCHHHHHHHHHHHh
Confidence 21 3567777777654
No 55
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=76.51 E-value=4.6 Score=43.90 Aligned_cols=88 Identities=14% Similarity=0.180 Sum_probs=54.0
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCC------CcEEEEEcCCCcCCcc-hHHHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDY------RKIALFVSSSDATQPG-YLLKF 423 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw------~~fSV~I~e~dv~~~~-~L~~i 423 (506)
+..+.|..+..++.|.-.......++|||++|| |||.+|.--. .++++- ....+.++..|...-. .|.++
T Consensus 363 ~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~--~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~l 439 (475)
T cd03813 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSC--RELIEGADDEALGPAGEVVPPADPEALARAILRL 439 (475)
T ss_pred cHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCCh--HHHhcCCcccccCCceEEECCCCHHHHHHHHHHH
Confidence 445677888888887644334678999999999 8888864211 122211 2356667766654311 13333
Q ss_pred HcCCCHHHHHHHHHHHhhhc
Q 010594 424 LRGISPAQIREMRRNLVQYS 443 (506)
Q Consensus 424 L~~Is~e~i~~Mr~~l~~v~ 443 (506)
|. .++...+|.++.++..
T Consensus 440 l~--~~~~~~~~~~~a~~~v 457 (475)
T cd03813 440 LK--DPELRRAMGEAGRKRV 457 (475)
T ss_pred hc--CHHHHHHHHHHHHHHH
Confidence 33 5778888888776633
No 56
>PRK00654 glgA glycogen synthase; Provisional
Probab=74.99 E-value=5.2 Score=43.42 Aligned_cols=83 Identities=22% Similarity=0.356 Sum_probs=51.5
Q ss_pred HHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCC-----cEEEEEcCCCcCCcchHHHHHcC
Q 010594 352 AQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYR-----KIALFVSSSDATQPGYLLKFLRG 426 (506)
Q Consensus 352 ~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~-----~fSV~I~e~dv~~~~~L~~iL~~ 426 (506)
....++.+.+++.|.=..+......|||.+||+||+-.-+ -++ +-+.|.. .-.+.++..|... +.+.|..
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g-G~~-e~v~~~~~~~~~~~G~lv~~~d~~~---la~~i~~ 424 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG-GLA-DTVIDYNPEDGEATGFVFDDFNAED---LLRALRR 424 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC-Ccc-ceeecCCCCCCCCceEEeCCCCHHH---HHHHHHH
Confidence 4467899999999987777788899999999988774322 111 1122221 3356666666433 4443332
Q ss_pred C-----CHHHHHHHHHHH
Q 010594 427 I-----SPAQIREMRRNL 439 (506)
Q Consensus 427 I-----s~e~i~~Mr~~l 439 (506)
+ .++.+.+|.++.
T Consensus 425 ~l~~~~~~~~~~~~~~~~ 442 (466)
T PRK00654 425 ALELYRQPPLWRALQRQA 442 (466)
T ss_pred HHHHhcCHHHHHHHHHHH
Confidence 2 345566776655
No 57
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=74.75 E-value=12 Score=39.92 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=51.6
Q ss_pred hHHhcccc--CcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCC-CcCCcc-hHHHHHcC
Q 010594 351 AAQNGMRR--SIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSS-DATQPG-YLLKFLRG 426 (506)
Q Consensus 351 ~~~~~m~~--S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~-dv~~~~-~L~~iL~~ 426 (506)
+..+.++. +.....|.........+.|||++|+ |||.++---.| ++++-..-.+.++.. +..+-. .|.+++.
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg~~--e~i~~~~~G~l~~~~~~~~~la~~I~~ll~- 376 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGGTP--EIVDNGGNGLLLSKDPTPNELVSSLSKFID- 376 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCCcH--HHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-
Confidence 34455554 2233334333334678999999995 99988743222 334433345555542 332211 1344443
Q ss_pred CCHHHHHHHHHHHhhhc-ceeEE
Q 010594 427 ISPAQIREMRRNLVQYS-RHFLY 448 (506)
Q Consensus 427 Is~e~i~~Mr~~l~~v~-~~f~Y 448 (506)
++++..+|+++.++.+ ++|-+
T Consensus 377 -~~~~~~~m~~~ar~~~~~~f~~ 398 (407)
T cd04946 377 -NEEEYQTMREKAREKWEENFNA 398 (407)
T ss_pred -CHHHHHHHHHHHHHHHHHHcCH
Confidence 6888999998877754 44433
No 58
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=74.22 E-value=3.4 Score=44.38 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=50.1
Q ss_pred cEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCCHHHHHHHHHH
Q 010594 360 IFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGISPAQIREMRRN 438 (506)
Q Consensus 360 ~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~e~i~~Mr~~ 438 (506)
...+.|.-......-+.|||++|| |||.++.-- ..++++-..-.+.++..|...-. .|.++|. .+++..+|.++
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg--~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~~~~~ 416 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGL-PIVATDDGG--PRDIIANCRNGLLVDVLDLEAIASALEDALS--DSSQWQLWSRN 416 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCC-CEEEeCCCC--cHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh--CHHHHHHHHHH
Confidence 344445433344677999999999 999998532 23444434456667766654311 1333333 46677778777
Q ss_pred Hhh-hcceeEEc
Q 010594 439 LVQ-YSRHFLYS 449 (506)
Q Consensus 439 l~~-v~~~f~Y~ 449 (506)
..+ +..+|-|.
T Consensus 417 a~~~~~~~fsw~ 428 (439)
T TIGR02472 417 GIEGVRRHYSWD 428 (439)
T ss_pred HHHHHHHhCCHH
Confidence 655 44555554
No 59
>PRK14099 glycogen synthase; Provisional
Probab=73.17 E-value=6.1 Score=43.45 Aligned_cols=85 Identities=22% Similarity=0.262 Sum_probs=52.3
Q ss_pred hHHhcc-ccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCC--------cEEEEEcCCCcCCcchHH
Q 010594 351 AAQNGM-RRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYR--------KIALFVSSSDATQPGYLL 421 (506)
Q Consensus 351 ~~~~~m-~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~--------~fSV~I~e~dv~~~~~L~ 421 (506)
.....+ +.+.+.+.|.=..+......|||.+||+||+ ++.=-++ +-+.|.. .-.+.++..|... |.
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~---La 435 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADA---LA 435 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHH---HH
Confidence 334445 5688888888777788899999999999988 4421111 1122332 2456667666433 44
Q ss_pred HHHcC----C-CHHHHHHHHHHHh
Q 010594 422 KFLRG----I-SPAQIREMRRNLV 440 (506)
Q Consensus 422 ~iL~~----I-s~e~i~~Mr~~l~ 440 (506)
+.|.. + .++...+|+++..
T Consensus 436 ~ai~~a~~l~~d~~~~~~l~~~~~ 459 (485)
T PRK14099 436 AALRKTAALFADPVAWRRLQRNGM 459 (485)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhh
Confidence 44332 2 4677788887763
No 60
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=72.12 E-value=6.9 Score=41.10 Aligned_cols=96 Identities=10% Similarity=0.093 Sum_probs=53.8
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGIS 428 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is 428 (506)
.+..+.++.+..++.|.-.......+.|||++|| |||.++.-..+ +++.- ...++++. |...-. .|.++|...
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg~~--e~i~~-~~~~~~~~-~~~~l~~~l~~~l~~~- 334 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGGIP--EVLPP-DMILLAEP-DVESIVRKLEEAISIL- 334 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCCch--hheeC-CceeecCC-CHHHHHHHHHHHHhCh-
Confidence 4667788888888888755445678999999998 77777643322 33432 23444443 332200 144444432
Q ss_pred HHHHHHHHHHHhhhcceeEEccC
Q 010594 429 PAQIREMRRNLVQYSRHFLYSSP 451 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~~~f~Y~~p 451 (506)
.++...+++...++..+|-|...
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~~ 357 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWEDV 357 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHHH
Confidence 22222334444556677666643
No 61
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=69.83 E-value=15 Score=41.48 Aligned_cols=62 Identities=10% Similarity=0.026 Sum_probs=41.9
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcC
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDAT 415 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~ 415 (506)
+..+.|+.+..++.|.-.......+.|||.+|| |||.++.--.| +.+.-..-.+.++..|..
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~~--EiV~dG~nG~LVp~~D~~ 526 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGSA--ECFIEGVSGFILDDAQTV 526 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCcH--HHcccCCcEEEECCCChh
Confidence 445667888888777655556789999999999 99998753222 333334445667766643
No 62
>PHA01630 putative group 1 glycosyl transferase
Probab=68.92 E-value=10 Score=39.54 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=32.0
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE 391 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~ 391 (506)
.+..+.++.+..++.|.-......-+.|||++|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 4566788999999988765545777999999998 7777763
No 63
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=65.41 E-value=23 Score=39.16 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=51.2
Q ss_pred HHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC-cccCCCCCCCCCcEEEEEcC----CCcCC-cchHHHH-H
Q 010594 352 AQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE-LELPFEGILDYRKIALFVSS----SDATQ-PGYLLKF-L 424 (506)
Q Consensus 352 ~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~-~~LPFe~vlDw~~fSV~I~e----~dv~~-~~~L~~i-L 424 (506)
..+.++.+.-++.|.=.......+.|||++|| |||..|- .-.| ++|.-..-.+.++. .|..+ ...+.+. .
T Consensus 386 ~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~~--eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~ 462 (500)
T TIGR02918 386 LSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGNP--TFIEDNKNGYLIPIDEEEDDEDQIITALAEKIV 462 (500)
T ss_pred HHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCCH--HHccCCCCEEEEeCCccccchhHHHHHHHHHHH
Confidence 34556666666655533335778999999998 7777763 2211 22322333344441 12111 1112221 1
Q ss_pred cCCCHHHHHHHHHHHhhhcceeEEc
Q 010594 425 RGISPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 425 ~~Is~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
+-+.++++.+|.++..+..+.|.+.
T Consensus 463 ~ll~~~~~~~~~~~a~~~a~~fs~~ 487 (500)
T TIGR02918 463 EYFNSNDIDAFHEYSYQIAEGFLTA 487 (500)
T ss_pred HHhChHHHHHHHHHHHHHHHhcCHH
Confidence 2224667889999888877765444
No 64
>PLN02939 transferase, transferring glycosyl groups
Probab=63.64 E-value=22 Score=42.58 Aligned_cols=93 Identities=13% Similarity=0.181 Sum_probs=54.9
Q ss_pred HhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCC--------cEEEEEcCCCcCCcc-hHHHH
Q 010594 353 QNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYR--------KIALFVSSSDATQPG-YLLKF 423 (506)
Q Consensus 353 ~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~--------~fSV~I~e~dv~~~~-~L~~i 423 (506)
...++.|.+++.|.=..+...-..+||.+||+||+...+= + -+-+.|++ .-.+.++..|...-. .|...
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L-~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-L-NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-C-cceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 3578899999999877888899999999999999764321 1 11122322 234445554433200 12333
Q ss_pred HcCC--CHHHHHHHHHHHhhhcceeEEc
Q 010594 424 LRGI--SPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 424 L~~I--s~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
|..+ .++.+.+|+++. +...|-|.
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe 954 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWD 954 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHH
Confidence 3322 477888887754 22344444
No 65
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=61.75 E-value=27 Score=36.96 Aligned_cols=82 Identities=12% Similarity=0.201 Sum_probs=49.5
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCC-----CCCcEEEEEcCCCcCCcchHHHHHc
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGIL-----DYRKIALFVSSSDATQPGYLLKFLR 425 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vl-----Dw~~fSV~I~e~dv~~~~~L~~iL~ 425 (506)
+..+.|+.|.+++..+| ...+.|||.+|+ |||+.+.. |-++.. .-..+++.+. +..+ +.+.+.
T Consensus 266 ~~~~~~~~aDl~I~k~g----g~tl~EA~a~G~-PvI~~~~~--pgqe~~N~~~~~~~G~g~~~~--~~~~---l~~~i~ 333 (391)
T PRK13608 266 HMNEWMASSQLMITKPG----GITISEGLARCI-PMIFLNPA--PGQELENALYFEEKGFGKIAD--TPEE---AIKIVA 333 (391)
T ss_pred hHHHHHHhhhEEEeCCc----hHHHHHHHHhCC-CEEECCCC--CCcchhHHHHHHhCCcEEEeC--CHHH---HHHHHH
Confidence 45577889999887554 235899999996 88887632 322211 1233444432 2222 333333
Q ss_pred CC--CHHHHHHHHHHHhhhcc
Q 010594 426 GI--SPAQIREMRRNLVQYSR 444 (506)
Q Consensus 426 ~I--s~e~i~~Mr~~l~~v~~ 444 (506)
.+ .++++.+|+++..+..+
T Consensus 334 ~ll~~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 334 SLTNGNEQLTNMISTMEQDKI 354 (391)
T ss_pred HHhcCHHHHHHHHHHHHHhcC
Confidence 22 57888999999877655
No 66
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=61.67 E-value=33 Score=36.65 Aligned_cols=91 Identities=15% Similarity=0.264 Sum_probs=55.2
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC-----cccCCCCCCCCCcEEEEEcCCCcCCcchHHHHH
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE-----LELPFEGILDYRKIALFVSSSDATQPGYLLKFL 424 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~-----~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL 424 (506)
+...+.+.++++-+.-.=+..-...+.|+|++|-|||.=.-+ +..|+++. . .=|..+++..-...+.+|+
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~----~-tGFla~t~~EYaE~iLkIv 422 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGE----T-TGFLAPTDEEYAEAILKIV 422 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCc----c-ceeecCChHHHHHHHHHHH
Confidence 345678889999988877777789999999999999976532 45555331 1 1123232211101133443
Q ss_pred cCCCHHHHHHHHHHHhhhccee
Q 010594 425 RGISPAQIREMRRNLVQYSRHF 446 (506)
Q Consensus 425 ~~Is~e~i~~Mr~~l~~v~~~f 446 (506)
.. ..++...||++.+.-.-+|
T Consensus 423 ~~-~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 423 KL-NYDERNMMRRNARKSLARF 443 (465)
T ss_pred Hc-CHHHHHHHHHHHHHHHHHh
Confidence 32 5566777887766544333
No 67
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=60.24 E-value=41 Score=35.32 Aligned_cols=78 Identities=15% Similarity=0.297 Sum_probs=46.5
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCC------CCCCcEEEEEcCCCcCCcchHHHHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGI------LDYRKIALFVSSSDATQPGYLLKFL 424 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~v------lDw~~fSV~I~e~dv~~~~~L~~iL 424 (506)
+..+.|+.|...+.++|- ..+.|||.+|+ |||+.+.. |-.++ ++ ....+.+ .+. ..|.+.+
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~~--pgqe~gn~~~i~~-~g~g~~~--~~~---~~la~~i 341 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGYI--PGQEEGNVPYVVD-NGFGAFS--ESP---KEIARIV 341 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecCC--CccchhhHHHHHh-CCceeec--CCH---HHHHHHH
Confidence 356778889888887762 24899999998 78877632 32221 22 3445544 222 1243333
Q ss_pred cCC---CHHHHHHHHHHHhh
Q 010594 425 RGI---SPAQIREMRRNLVQ 441 (506)
Q Consensus 425 ~~I---s~e~i~~Mr~~l~~ 441 (506)
..+ .++..++|+++..+
T Consensus 342 ~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 342 AEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 322 26778888887755
No 68
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=57.26 E-value=12 Score=38.11 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=48.7
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCC-----CCCCCCcEEEEEcCCC--cCCcc-hHHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFE-----GILDYRKIALFVSSSD--ATQPG-YLLK 422 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe-----~vlDw~~fSV~I~e~d--v~~~~-~L~~ 422 (506)
++.+.|..+..++.+.| ...++|||.+|+ |||+.+.-.-+-+ +.+......+.++..+ ...-. .|.+
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 46678899999998876 246999999997 7777532000000 1222344555565544 22200 1333
Q ss_pred HHcCCCHHHHHHHHHHHhh
Q 010594 423 FLRGISPAQIREMRRNLVQ 441 (506)
Q Consensus 423 iL~~Is~e~i~~Mr~~l~~ 441 (506)
.|. .++...+|.++..+
T Consensus 318 ll~--~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLL--DPANLEAMAEAARK 334 (348)
T ss_pred HHc--CHHHHHHHHHHHHh
Confidence 343 56777888887754
No 69
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=55.55 E-value=53 Score=29.95 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=46.0
Q ss_pred ceEEEeecccccCCCChhHHHHHHHHhCCCCeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCcee
Q 010594 306 STLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIP 385 (506)
Q Consensus 306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIP 385 (506)
++-+.+.|.... ....+.+.........+.+...- .........++.|..+++|......+..++|||.+|| |
T Consensus 135 ~~~~~i~G~~~~---~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-p 207 (229)
T cd01635 135 DLKLVIAGDGPE---REYLEELLAALLLLDRVIFLGGL---DPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-P 207 (229)
T ss_pred CeEEEEEeCCCC---hHHHHHHHHhcCCcccEEEeCCC---CcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-C
Confidence 566777775421 11222212222333345444321 1123445555669999999988778899999999987 5
Q ss_pred EEeeCC
Q 010594 386 VIVSDE 391 (506)
Q Consensus 386 Viisd~ 391 (506)
||.++.
T Consensus 208 vi~s~~ 213 (229)
T cd01635 208 VIATDV 213 (229)
T ss_pred EEEcCC
Confidence 555553
No 70
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=54.91 E-value=26 Score=42.37 Aligned_cols=83 Identities=20% Similarity=0.227 Sum_probs=52.6
Q ss_pred EEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--CHHHHHHHHHH
Q 010594 361 FCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI--SPAQIREMRRN 438 (506)
Q Consensus 361 FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s~e~i~~Mr~~ 438 (506)
.++.|.=..+...-+.|||++|+ |||.++.-- ..+++.-..-.+.|+..|... |-+.|..+ .++...+|.++
T Consensus 574 VFV~PS~~EgFGLvlLEAMAcGl-PVVASdvGG--~~EII~~g~nGlLVdP~D~ea---LA~AL~~LL~Dpelr~~m~~~ 647 (1050)
T TIGR02468 574 VFINPAFIEPFGLTLIEAAAHGL-PMVATKNGG--PVDIHRVLDNGLLVDPHDQQA---IADALLKLVADKQLWAECRQN 647 (1050)
T ss_pred eeeCCcccCCCCHHHHHHHHhCC-CEEEeCCCC--cHHHhccCCcEEEECCCCHHH---HHHHHHHHhhCHHHHHHHHHH
Confidence 44446544556788999999996 999997422 223444445567787766443 43333322 56778889888
Q ss_pred HhhhcceeEEc
Q 010594 439 LVQYSRHFLYS 449 (506)
Q Consensus 439 l~~v~~~f~Y~ 449 (506)
..+..+.|-|.
T Consensus 648 gr~~v~~FSWe 658 (1050)
T TIGR02468 648 GLKNIHLFSWP 658 (1050)
T ss_pred HHHHHHHCCHH
Confidence 77766665544
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=53.90 E-value=14 Score=38.87 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=34.1
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE 391 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~ 391 (506)
.+..+.++.+.+-+.|.-......-+.|||++|| |||.++-
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~ 255 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM 255 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence 4566788888888888766667888999999999 9998865
No 72
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=52.24 E-value=13 Score=42.05 Aligned_cols=100 Identities=16% Similarity=0.142 Sum_probs=62.8
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccC---CCCCCCCCcEEEEEcCCCcCCcc----hHHHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELP---FEGILDYRKIALFVSSSDATQPG----YLLKF 423 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LP---Fe~vlDw~~fSV~I~e~dv~~~~----~L~~i 423 (506)
.|.+.++.+..++.|.-..+++.-..|||++|+ |||.++.--++ -+-+-+-....|.|...+..... .|.+.
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~-PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~ 545 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI-PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQY 545 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcCC-CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHH
Confidence 577889999999999988888889999999995 99999864332 02122333567777643321100 12222
Q ss_pred Hc---CCCHHHHHHHHHHHhhhcceeEEccC
Q 010594 424 LR---GISPAQIREMRRNLVQYSRHFLYSSP 451 (506)
Q Consensus 424 L~---~Is~e~i~~Mr~~l~~v~~~f~Y~~p 451 (506)
|. .-+..+....|....++...|.|..-
T Consensus 546 m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~ 576 (590)
T cd03793 546 MYEFCQLSRRQRIIQRNRTERLSDLLDWRNL 576 (590)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHhCCHHHH
Confidence 22 23444444444444578888888753
No 73
>PLN00142 sucrose synthase
Probab=51.73 E-value=32 Score=40.59 Aligned_cols=109 Identities=11% Similarity=0.139 Sum_probs=62.5
Q ss_pred hcccc-CcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcC--CCH
Q 010594 354 NGMRR-SIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRG--ISP 429 (506)
Q Consensus 354 ~~m~~-S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~--Is~ 429 (506)
..++. +...++|.=..+...-+.|||++|+ |||.++.=-++ +++.-..-.+.|+..|...-. .|.+.|+. -.+
T Consensus 661 r~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~~--EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp 737 (815)
T PLN00142 661 RYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGPA--EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDP 737 (815)
T ss_pred HHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCH
Confidence 33443 3344567655566788999999997 78887642222 233334456667766643311 13333322 267
Q ss_pred HHHHHHHHHH-hhhcceeEEccCCCCC---CchhHHHHHH
Q 010594 430 AQIREMRRNL-VQYSRHFLYSSPAQPL---GPEDLVWRMI 465 (506)
Q Consensus 430 e~i~~Mr~~l-~~v~~~f~Y~~p~~~~---~~~D~~~~~i 465 (506)
+...+|.++. .++..+|.|..-...+ .....||.-+
T Consensus 738 ~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~ 777 (815)
T PLN00142 738 SYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYV 777 (815)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhc
Confidence 7888888875 4466888887644332 2334566444
No 74
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=45.53 E-value=16 Score=38.87 Aligned_cols=104 Identities=16% Similarity=0.117 Sum_probs=56.4
Q ss_pred hHHhccccCcEEEccCCC-CCCCchHHHHHHhCceeEEeeCCcccCCCCC---CCCCcEEEEEcCCCcCCcchHHHHHcC
Q 010594 351 AAQNGMRRSIFCLNPAGD-TPSSARLFDAIVSGCIPVIVSDELELPFEGI---LDYRKIALFVSSSDATQPGYLLKFLRG 426 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gd-s~ts~RlfDAi~aGCIPViisd~~~LPFe~v---lDw~~fSV~I~e~dv~~~~~L~~iL~~ 426 (506)
+....++.+..++++... .....-+.|||++|| |||.+++.. -+.+. +.-..+.+.+ .|... |.+.|..
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~~~--~d~~~---La~~l~~ 384 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAIQV--EDAED---LAKAVTY 384 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeEEE--CCHHH---HHHHHHH
Confidence 456778888876664322 113445999999997 898876431 11111 1112344432 23322 3333332
Q ss_pred C--CHHHHHHHHHHHhhhcceeEEccCCCCCCchhHHHHHHHhHH
Q 010594 427 I--SPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKL 469 (506)
Q Consensus 427 I--s~e~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~D~~~~~i~~~L 469 (506)
+ .++...+|.++..++.... .++.+.+...+...|
T Consensus 385 ll~~~~~~~~m~~~a~~~~~~~--------~~~~~~~~~~l~~~l 421 (425)
T PRK05749 385 LLTDPDARQAYGEAGVAFLKQN--------QGALQRTLQLLEPYL 421 (425)
T ss_pred HhcCHHHHHHHHHHHHHHHHhC--------ccHHHHHHHHHHHhc
Confidence 1 5778888988887766432 134455555555443
No 75
>PLN02275 transferase, transferring glycosyl groups
Probab=44.04 E-value=79 Score=33.00 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=48.4
Q ss_pred ceEEEeecccccCCCChhHHHHHHHHhCC--CCeEEEcCCCCCcchhhHHhccccCcEEEccCC----CCCCCchHHHHH
Q 010594 306 STLLFFRGRLKRNAGGKIRAKLVAELSSA--EGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAG----DTPSSARLFDAI 379 (506)
Q Consensus 306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~--~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~G----ds~ts~RlfDAi 379 (506)
.+-|.+.|. |..|++|.++.++. +++.+..+.. ...++.+.|+.+..++.|.. .+ ....++|||
T Consensus 261 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~v~~~~~~~---~~~~~~~~l~~aDv~v~~~~s~~~e~-~p~~llEAm 330 (371)
T PLN02275 261 RLLFIITGK------GPQKAMYEEKISRLNLRHVAFRTMWL---EAEDYPLLLGSADLGVSLHTSSSGLD-LPMKVVDMF 330 (371)
T ss_pred CeEEEEEeC------CCCHHHHHHHHHHcCCCceEEEcCCC---CHHHHHHHHHhCCEEEEecccccccc-ccHHHHHHH
Confidence 467788884 45677776665532 3455543211 24567788888888876532 22 245799999
Q ss_pred HhCceeEEeeCC
Q 010594 380 VSGCIPVIVSDE 391 (506)
Q Consensus 380 ~aGCIPViisd~ 391 (506)
++|+ |||.++.
T Consensus 331 A~G~-PVVa~~~ 341 (371)
T PLN02275 331 GCGL-PVCAVSY 341 (371)
T ss_pred HCCC-CEEEecC
Confidence 9997 8888763
No 76
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=43.45 E-value=87 Score=32.34 Aligned_cols=59 Identities=24% Similarity=0.183 Sum_probs=39.3
Q ss_pred hhHHHHHHHHhCCCCeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeC
Q 010594 322 KIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSD 390 (506)
Q Consensus 322 ~iR~~L~~~~~~~~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd 390 (506)
.++..+.+.+...+.+.+... -+...+...|+.+.+.+.+.|. -+.||+.+|+ |||...
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~ 300 (365)
T TIGR00236 242 VVREPLHKHLGDSKRVHLIEP----LEYLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLR 300 (365)
T ss_pred HHHHHHHHHhCCCCCEEEECC----CChHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECC
Confidence 456556555544455665542 2244677888999998877652 2799999987 888853
No 77
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=38.93 E-value=15 Score=38.51 Aligned_cols=40 Identities=18% Similarity=0.232 Sum_probs=30.3
Q ss_pred hhHHhccccCcEEEccCCCCC-----CCchHHHHHHhCceeEEeeC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTP-----SSARLFDAIVSGCIPVIVSD 390 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~-----ts~RlfDAi~aGCIPViisd 390 (506)
.+....++.+..|+.|--.+. ....++|+|++|+ |||..+
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 456778999999999964321 2357999999997 888664
No 78
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=35.13 E-value=88 Score=36.88 Aligned_cols=102 Identities=10% Similarity=0.174 Sum_probs=60.3
Q ss_pred cEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcC--CCHHHHHHHH
Q 010594 360 IFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRG--ISPAQIREMR 436 (506)
Q Consensus 360 ~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~--Is~e~i~~Mr 436 (506)
..+++|.=..+...-+.|||++|+ |||.++.=-++ +.+.-..-.+.|+..|...-. .|.++|+. -.++.+.+|.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGl-PVVAT~~GG~~--EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGL-PTFATRFGGPL--EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 455667767777889999999998 56666532111 223334456667766654311 13333321 2678888998
Q ss_pred HHHh-hhcceeEEccCCCCC---CchhHHHHH
Q 010594 437 RNLV-QYSRHFLYSSPAQPL---GPEDLVWRM 464 (506)
Q Consensus 437 ~~l~-~v~~~f~Y~~p~~~~---~~~D~~~~~ 464 (506)
++.+ ++..+|.|......+ ...-.||.-
T Consensus 722 ~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~ 753 (784)
T TIGR02470 722 QGGLQRIYEKYTWKIYSERLLTLAGIYGFWKF 753 (784)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhh
Confidence 8754 467889888644322 123456653
No 79
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=34.08 E-value=1.2e+02 Score=35.23 Aligned_cols=60 Identities=13% Similarity=0.005 Sum_probs=38.1
Q ss_pred HHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCc
Q 010594 352 AQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDA 414 (506)
Q Consensus 352 ~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv 414 (506)
....|+.+...+.|.-.......++|||.+|| |||.++.--. .+++.-..-.+.++..|.
T Consensus 585 v~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG~--~EiV~dg~~GlLv~~~d~ 644 (694)
T PRK15179 585 VGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGGA--GEAVQEGVTGLTLPADTV 644 (694)
T ss_pred HHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCCh--HHHccCCCCEEEeCCCCC
Confidence 44566777776766544446789999999996 8888874322 233433444566776554
No 80
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=33.05 E-value=84 Score=22.45 Aligned_cols=18 Identities=28% Similarity=0.340 Sum_probs=11.0
Q ss_pred HHHHHHHhcCCCCCCCCC
Q 010594 31 SLLFALFSLTRNPYSDPY 48 (506)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~ 48 (506)
..||+.-.+|..|.+||.
T Consensus 16 v~LFifGflsnDp~RnP~ 33 (36)
T PF02532_consen 16 VSLFIFGFLSNDPGRNPG 33 (36)
T ss_dssp HHHHHHHHHTTCTTSSSS
T ss_pred HHHHhccccCCCCCCCCC
Confidence 334444456777888775
No 81
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=30.58 E-value=41 Score=29.07 Aligned_cols=13 Identities=31% Similarity=0.373 Sum_probs=6.5
Q ss_pred cchhHHHHHHHHH
Q 010594 18 SRILLFTLFLFAF 30 (506)
Q Consensus 18 ~~~~~~~~~~~~~ 30 (506)
|+++||+..|||+
T Consensus 3 SK~~llL~l~LA~ 15 (95)
T PF07172_consen 3 SKAFLLLGLLLAA 15 (95)
T ss_pred hhHHHHHHHHHHH
Confidence 5565555444443
No 82
>COG5111 RPC34 DNA-directed RNA polymerase III, subunit C34 [Transcription]
Probab=30.24 E-value=28 Score=34.91 Aligned_cols=39 Identities=10% Similarity=0.204 Sum_probs=33.4
Q ss_pred hhcchhHHHHhhhhceecCCCccCCCCCCeEEE-ecCCch
Q 010594 89 VVRKFDDVASKIERQRVYEDSYYPLSLPIRVYV-YEMPRK 127 (506)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~IYV-YdLPp~ 127 (506)
+..-+++-+..-|++++..+--.--.+.+|||| |||-|.
T Consensus 114 h~~vV~kcLkSlESkr~vKSvKsvKnptRKiYmLYdlvPS 153 (301)
T COG5111 114 HHNVVGKCLKSLESKRIVKSVKSVKNPTRKIYMLYDLVPS 153 (301)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEeccccc
Confidence 366789999999999999997777788999998 888775
No 83
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=29.55 E-value=86 Score=32.11 Aligned_cols=84 Identities=18% Similarity=0.260 Sum_probs=49.4
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC-ccc------CCCCCCCCCcEEEEEcCCCcCCcchHHHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE-LEL------PFEGILDYRKIALFVSSSDATQPGYLLKF 423 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~-~~L------PFe~vlDw~~fSV~I~e~dv~~~~~L~~i 423 (506)
.+.+.|..+..++...| ..-++|||.+|+ |||+.+. ... ..+.+.+ ....+.++.+++ .+..|.+.
T Consensus 245 ~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~-~~~~l~~~ 317 (357)
T PRK00726 245 DMAAAYAAADLVICRAG----ASTVAELAAAGL-PAILVPLPHAADDHQTANARALVD-AGAALLIPQSDL-TPEKLAEK 317 (357)
T ss_pred hHHHHHHhCCEEEECCC----HHHHHHHHHhCC-CEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccC-CHHHHHHH
Confidence 46678889999998776 245999999997 5555432 100 1112233 345677776663 22234333
Q ss_pred HcCC--CHHHHHHHHHHHhh
Q 010594 424 LRGI--SPAQIREMRRNLVQ 441 (506)
Q Consensus 424 L~~I--s~e~i~~Mr~~l~~ 441 (506)
++.+ .++...+|+++..+
T Consensus 318 i~~ll~~~~~~~~~~~~~~~ 337 (357)
T PRK00726 318 LLELLSDPERLEAMAEAARA 337 (357)
T ss_pred HHHHHcCHHHHHHHHHHHHh
Confidence 3322 36777888887543
No 84
>PRK10125 putative glycosyl transferase; Provisional
Probab=29.30 E-value=1.5e+02 Score=31.61 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=42.4
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDAT 415 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~ 415 (506)
.+..+.++.+...+.|.-......-+.|||++|| |||.+|-=-.| ++++-. -.+.++..|+.
T Consensus 298 ~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~~--Eiv~~~-~G~lv~~~d~~ 359 (405)
T PRK10125 298 RKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAAR--EVLQKS-GGKTVSEEEVL 359 (405)
T ss_pred HHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCChH--HhEeCC-cEEEECCCCHH
Confidence 4556777777777777766556788999999996 89888743332 334432 46677777654
No 85
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=29.21 E-value=51 Score=35.93 Aligned_cols=90 Identities=18% Similarity=0.082 Sum_probs=54.3
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCce---eEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcch-HHHHHc
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCI---PVIVSDELELPFEGILDYRKIALFVSSSDATQPGY-LLKFLR 425 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCI---PViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~-L~~iL~ 425 (506)
.+....++.+.-++.|.-......-..|||++||= |||+++.--.+-+ ..-.+.|+..|...-.. |.+.|.
T Consensus 352 ~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~l~ 426 (460)
T cd03788 352 EELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRALT 426 (460)
T ss_pred HHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHHHc
Confidence 45566777777777766444346778999999996 6999874322211 12256677666544111 333333
Q ss_pred CCCHHHHHHHHHHHhhhcce
Q 010594 426 GISPAQIREMRRNLVQYSRH 445 (506)
Q Consensus 426 ~Is~e~i~~Mr~~l~~v~~~ 445 (506)
-++++.+.|.++..+....
T Consensus 427 -~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 427 -MPLEERRERHRKLREYVRT 445 (460)
T ss_pred -CCHHHHHHHHHHHHHHHHh
Confidence 3667777777766665543
No 86
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=26.62 E-value=1.1e+02 Score=30.84 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=27.5
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEee
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVS 389 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViis 389 (506)
.+..+.|+.+...++..| + .++|++.+| +|+|+-
T Consensus 233 ~~m~~lm~~aDl~Is~~G-~----T~~E~~a~g-~P~i~i 266 (279)
T TIGR03590 233 ENMAELMNEADLAIGAAG-S----TSWERCCLG-LPSLAI 266 (279)
T ss_pred HHHHHHHHHCCEEEECCc-h----HHHHHHHcC-CCEEEE
Confidence 355688999999999877 3 299999999 677764
No 87
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=24.69 E-value=1.3e+02 Score=33.04 Aligned_cols=88 Identities=15% Similarity=0.067 Sum_probs=52.4
Q ss_pred hhhHHhccccCcEEEccCCCCCCCchHHHHHHhCcee----EEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHH
Q 010594 349 KAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIP----VIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKF 423 (506)
Q Consensus 349 ~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIP----Viisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~i 423 (506)
..+....++.+.-|+.|.=......-..|||++|+ | ||+++.--.+- .+. -++.|+..|...-. .|.++
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~~--~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAAQ--ELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCChH--HhC---CcEEECCCCHHHHHHHHHHH
Confidence 34566778888888876633334677999999996 8 89887432211 122 25677777755411 13344
Q ss_pred HcCCCHHHHHHHHHHHhhhc
Q 010594 424 LRGISPAQIREMRRNLVQYS 443 (506)
Q Consensus 424 L~~Is~e~i~~Mr~~l~~v~ 443 (506)
|. .++++..++.+++.+..
T Consensus 420 L~-~~~~er~~r~~~~~~~v 438 (456)
T TIGR02400 420 LT-MPLEEREERHRAMMDKL 438 (456)
T ss_pred Hc-CCHHHHHHHHHHHHHHH
Confidence 44 35666555555555443
No 88
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=24.08 E-value=52 Score=29.61 Aligned_cols=19 Identities=32% Similarity=0.609 Sum_probs=9.3
Q ss_pred hHHHHHHHHHHHHHHHHhc
Q 010594 21 LLFTLFLFAFSLLFALFSL 39 (506)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~ 39 (506)
+||++++++|.|+||++..
T Consensus 3 ~l~~iii~~i~l~~~~~~~ 21 (130)
T PF12273_consen 3 VLFAIIIVAILLFLFLFYC 21 (130)
T ss_pred eeHHHHHHHHHHHHHHHHH
Confidence 4455545555555555444
No 89
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=23.73 E-value=3e+02 Score=27.83 Aligned_cols=139 Identities=16% Similarity=0.113 Sum_probs=79.3
Q ss_pred CCCCCCceEEEeecccccCCCChhHHHHHHHHhCCCC-e--EEEc-CCC-CCc------c-hhhHHhccccCcEEEccCC
Q 010594 300 ESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEG-V--VIEE-GTA-GEV------G-KAAAQNGMRRSIFCLNPAG 367 (506)
Q Consensus 300 ~~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~-~--~i~~-~~~-~~~------~-~~~~~~~m~~S~FCL~P~G 367 (506)
.+.+.|.-.++|+|+.. ++..|+.|++...+.++ + .+.. +.. .+. . ...-++...+-||=+..-|
T Consensus 78 ~pW~~K~~~a~WRG~~~---~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG 154 (256)
T smart00672 78 TKWSDKNAYAYWRGNPT---VASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEG 154 (256)
T ss_pred CCccccCcCccccCCCC---CCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCC
Confidence 35677888899999874 22389999988777654 2 3332 111 010 0 0112344567889999999
Q ss_pred CCCCCchHHHHHHhCceeEEeeCCcccCC-CCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--CHHHHHHHHHHHhhhcc
Q 010594 368 DTPSSARLFDAIVSGCIPVIVSDELELPF-EGILDYRKIALFVSSSDATQPGYLLKFLRGI--SPAQIREMRRNLVQYSR 444 (506)
Q Consensus 368 ds~ts~RlfDAi~aGCIPViisd~~~LPF-e~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s~e~i~~Mr~~l~~v~~ 444 (506)
.+ .|-|+.=-|.+|+|++.....+..=| +...+|.-|. -|..+ .. ..+|.++++=+ .+++.+++=++..+.++
T Consensus 155 ~~-~S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d-~s-d~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~ 230 (256)
T smart00672 155 VA-WSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSD-LS-CRELKEAVDWGNEHDKKAQEIGKRGSEFIQ 230 (256)
T ss_pred cc-chhhHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCC-Cc-hhhHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 98 57899999999999999885432112 2234555542 33321 11 11144444311 45555555555555444
Q ss_pred e
Q 010594 445 H 445 (506)
Q Consensus 445 ~ 445 (506)
.
T Consensus 231 ~ 231 (256)
T smart00672 231 Q 231 (256)
T ss_pred H
Confidence 3
No 90
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=23.30 E-value=72 Score=32.31 Aligned_cols=84 Identities=12% Similarity=0.188 Sum_probs=48.8
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCc-------ccCCCCCCCCCcEEEEEcCC--CcCCcchHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDEL-------ELPFEGILDYRKIALFVSSS--DATQPGYLL 421 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~-------~LPFe~vlDw~~fSV~I~e~--dv~~~~~L~ 421 (506)
++.+.|..+.+.+.+.|. .-+.|||.+|+ |||+.+.- ..+.+.+.+ ....+.++.. +.. .|.
T Consensus 245 ~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~---~l~ 315 (350)
T cd03785 245 DMAAAYAAADLVISRAGA----STVAELAALGL-PAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPE---RLA 315 (350)
T ss_pred hHHHHHHhcCEEEECCCH----hHHHHHHHhCC-CEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHH---HHH
Confidence 556778888888887762 35899999998 56654321 111122223 3445556543 322 244
Q ss_pred HHHcCC--CHHHHHHHHHHHhhhc
Q 010594 422 KFLRGI--SPAQIREMRRNLVQYS 443 (506)
Q Consensus 422 ~iL~~I--s~e~i~~Mr~~l~~v~ 443 (506)
+.|+.+ .++...+|+++.++..
T Consensus 316 ~~i~~ll~~~~~~~~~~~~~~~~~ 339 (350)
T cd03785 316 AALLELLSDPERLKAMAEAARSLA 339 (350)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcC
Confidence 433322 5677888888775543
No 91
>CHL00024 psbI photosystem II protein I
Probab=21.21 E-value=78 Score=22.61 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=10.6
Q ss_pred HHHHHhcCCCCCCCCCC
Q 010594 33 LFALFSLTRNPYSDPYP 49 (506)
Q Consensus 33 ~~~~~~~~~~~~~~~~~ 49 (506)
||+.-.||..|.+||..
T Consensus 18 LFifGFlsnDp~RnP~r 34 (36)
T CHL00024 18 LFIFGFLSNDPGRNPGR 34 (36)
T ss_pred HHHccccCCCCCCCCCC
Confidence 34444567778887753
No 92
>COG2989 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.87 E-value=46 Score=37.25 Aligned_cols=11 Identities=27% Similarity=0.618 Sum_probs=7.6
Q ss_pred CeEEEecCCch
Q 010594 117 IRVYVYEMPRK 127 (506)
Q Consensus 117 ~~IYVYdLPp~ 127 (506)
--|||||-|.+
T Consensus 450 ~aIYmHDTP~k 460 (561)
T COG2989 450 HAIYLHDTPSK 460 (561)
T ss_pred cceeeecCcch
Confidence 45777777765
No 93
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.04 E-value=91 Score=29.58 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=29.5
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE 391 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~ 391 (506)
....+.++.+...+.|.-.......+.||+.+| +|||.++.
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~ 308 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDV 308 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCC
Confidence 345557777888888854322234499999999 99988865
Done!