Query 010594
Match_columns 506
No_of_seqs 237 out of 816
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 10:09:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010594.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010594hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 97.3 0.00073 2.5E-08 59.8 8.2 129 306-450 32-162 (166)
2 2bfw_A GLGA glycogen synthase; 95.9 0.01 3.5E-07 53.8 6.2 126 306-445 70-198 (200)
3 3c48_A Predicted glycosyltrans 95.0 0.078 2.7E-06 53.8 9.5 91 350-446 317-409 (438)
4 2gek_A Phosphatidylinositol ma 94.2 0.055 1.9E-06 54.0 6.2 94 350-449 274-370 (406)
5 3okp_A GDP-mannose-dependent a 92.7 0.21 7.1E-06 49.5 7.3 92 350-448 264-365 (394)
6 2nzw_A Alpha1,3-fucosyltransfe 92.0 0.44 1.5E-05 49.3 8.9 122 303-436 177-308 (371)
7 2jjm_A Glycosyl transferase, g 91.9 0.11 3.7E-06 52.1 4.2 93 351-449 277-372 (394)
8 2iw1_A Lipopolysaccharide core 91.8 0.12 3.9E-06 51.0 4.2 92 351-448 263-357 (374)
9 3fro_A GLGA glycogen synthase; 90.4 0.22 7.6E-06 49.9 4.8 93 349-448 321-416 (439)
10 1f0k_A MURG, UDP-N-acetylgluco 90.0 0.065 2.2E-06 52.9 0.4 86 351-443 247-338 (364)
11 2f9f_A First mannosyl transfer 90.0 0.11 3.8E-06 46.6 1.9 41 350-391 89-129 (177)
12 2x6q_A Trehalose-synthase TRET 85.4 0.69 2.4E-05 46.5 4.7 91 351-449 308-401 (416)
13 2r60_A Glycosyl transferase, g 85.3 0.38 1.3E-05 50.0 2.7 117 324-449 321-446 (499)
14 3oy2_A Glycosyltransferase B73 84.2 0.22 7.6E-06 50.1 0.4 96 350-449 265-377 (413)
15 3rhz_A GTF3, nucleotide sugar 83.8 0.42 1.4E-05 48.5 2.2 92 349-448 224-322 (339)
16 2x0d_A WSAF; GT4 family, trans 80.7 0.73 2.5E-05 47.6 2.7 95 349-452 305-400 (413)
17 1rzu_A Glycogen synthase 1; gl 78.7 0.88 3E-05 46.8 2.5 84 351-440 358-455 (485)
18 2qzs_A Glycogen synthase; glyc 78.6 0.84 2.9E-05 47.0 2.3 84 351-440 359-456 (485)
19 1vgv_A UDP-N-acetylglucosamine 75.5 1.2 4.3E-05 43.9 2.5 101 323-439 251-353 (384)
20 3beo_A UDP-N-acetylglucosamine 73.1 1.1 3.7E-05 44.1 1.3 100 323-438 251-352 (375)
21 3s28_A Sucrose synthase 1; gly 72.3 2 7E-05 48.7 3.5 94 351-450 656-757 (816)
22 2iuy_A Avigt4, glycosyltransfe 64.9 9.1 0.00031 37.0 6.1 41 350-391 223-273 (342)
23 2vsy_A XCC0866; transferase, g 59.8 19 0.00063 37.7 7.7 37 350-388 445-481 (568)
24 2o6l_A UDP-glucuronosyltransfe 48.3 18 0.00063 31.3 4.6 134 304-445 20-167 (170)
25 3arc_I Photosystem II reaction 47.2 14 0.00048 25.5 2.7 29 20-49 6-34 (38)
26 3nb0_A Glycogen [starch] synth 45.1 8.1 0.00028 43.2 2.0 102 350-452 510-623 (725)
27 3s2u_A UDP-N-acetylglucosamine 32.8 37 0.0013 33.8 4.5 83 352-443 246-339 (365)
28 1uqt_A Alpha, alpha-trehalose- 32.7 40 0.0014 35.4 5.0 91 350-446 343-438 (482)
29 2hy7_A Glucuronosyltransferase 28.3 41 0.0014 33.9 4.0 41 350-391 276-323 (406)
30 2ad9_A Polypyrimidine tract-bi 28.2 46 0.0016 28.4 3.7 35 101-135 16-50 (119)
31 3ixz_B Potassium-transporting 25.7 88 0.003 31.0 5.7 16 26-41 53-68 (290)
32 3vue_A GBSS-I, granule-bound s 25.2 2.1E+02 0.0072 30.2 9.0 39 351-390 394-432 (536)
33 3l7x_A SMU.412C, putative HIT- 24.9 97 0.0033 28.0 5.5 59 375-442 39-102 (173)
34 1x4e_A RNA binding motif, sing 21.4 67 0.0023 24.3 3.2 24 112-135 1-24 (85)
35 2dgv_A HnRNP M, heterogeneous 20.9 68 0.0023 24.6 3.1 25 111-135 3-27 (92)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.25 E-value=0.00073 Score=59.76 Aligned_cols=129 Identities=12% Similarity=0.196 Sum_probs=77.0
Q ss_pred ceEEEeecccccCCCChhHHHHHHHHhCCC-CeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCce
Q 010594 306 STLLFFRGRLKRNAGGKIRAKLVAELSSAE-GVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCI 384 (506)
Q Consensus 306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~-~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCI 384 (506)
++-+.+.|. +..++.+.+...... .+.+ +.. +..+..+.++.+..++.|.-.......++|||.+|||
T Consensus 32 ~~~l~i~G~------g~~~~~~~~~~~~~~~~v~~--g~~---~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~v 100 (166)
T 3qhp_A 32 DIVLLLKGK------GPDEKKIKLLAQKLGVKAEF--GFV---NSNELLEILKTCTLYVHAANVESEAIACLEAISVGIV 100 (166)
T ss_dssp GEEEEEECC------STTHHHHHHHHHHHTCEEEC--CCC---CHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCC
T ss_pred CeEEEEEeC------CccHHHHHHHHHHcCCeEEE--eec---CHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCC
Confidence 566777774 233444444433322 2332 221 2456788999999999998665567899999999999
Q ss_pred eEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCCHHHHHHHHHHHhhhcceeEEcc
Q 010594 385 PVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGISPAQIREMRRNLVQYSRHFLYSS 450 (506)
Q Consensus 385 PViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~~ 450 (506)
|||..+..- ...+++.-... .++..|...-. .|.+++. .++...+|.++..+..++|-|..
T Consensus 101 Pvi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~--~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 101 PVIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLE--NKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp EEEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHC---
T ss_pred cEEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHCChhh
Confidence 999944321 11122232333 44444543311 1334444 78889999999888778877764
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=95.94 E-value=0.01 Score=53.78 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=75.8
Q ss_pred ceEEEeecccccCCCChhHHHHHHHHhCCCCeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCcee
Q 010594 306 STLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIP 385 (506)
Q Consensus 306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIP 385 (506)
.+-+.+.|... ...+..+.+..+....+.+..+. -...+..+.|+.+.+++.|.-....+..++|||.+|| |
T Consensus 70 ~~~l~i~G~~~----~~~~~~l~~~~~~~~~v~~~~g~---~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-P 141 (200)
T 2bfw_A 70 EMRFIIIGKGD----PELEGWARSLEEKHGNVKVITEM---LSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-I 141 (200)
T ss_dssp GEEEEEECCBC----HHHHHHHHHHHHHCTTEEEECSC---CCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-E
T ss_pred CeEEEEECCCC----hHHHHHHHHHHHhcCCEEEEecc---CCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-C
Confidence 34566666421 11455555554444455551221 1245678899999999999876666788999999998 6
Q ss_pred EEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcC---CCHHHHHHHHHHHhhhcce
Q 010594 386 VIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRG---ISPAQIREMRRNLVQYSRH 445 (506)
Q Consensus 386 Viisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~---Is~e~i~~Mr~~l~~v~~~ 445 (506)
||.++.-. ..+.+ -....+.++..+... +.+.|.. +.++++.+|.++.++....
T Consensus 142 vI~~~~~~--~~e~~-~~~~g~~~~~~~~~~---l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 142 PIASAVGG--LRDII-TNETGILVKAGDPGE---LANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp EEEESCHH--HHHHC-CTTTCEEECTTCHHH---HHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC--hHHHc-CCCceEEecCCCHHH---HHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 77776421 11223 123345555545433 4444433 2788889999888776543
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.96 E-value=0.078 Score=53.79 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=62.1
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI-- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I-- 427 (506)
.+..+.|+.+..++.|.-.......++|||.+|| |||.++.-. ..+++.-....+.++..|... +.+.|..+
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~---la~~i~~l~~ 390 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVGG--LPIAVAEGETGLLVDGHSPHA---WADALATLLD 390 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCTT--HHHHSCBTTTEEEESSCCHHH---HHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCCC--hhHHhhCCCcEEECCCCCHHH---HHHHHHHHHc
Confidence 4667889999999999876656788999999999 888887421 223343344556676555433 43333332
Q ss_pred CHHHHHHHHHHHhhhccee
Q 010594 428 SPAQIREMRRNLVQYSRHF 446 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~~~f 446 (506)
.++...+|.++..+....|
T Consensus 391 ~~~~~~~~~~~~~~~~~~~ 409 (438)
T 3c48_A 391 DDETRIRMGEDAVEHARTF 409 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhC
Confidence 6778889988887776653
No 4
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=94.23 E-value=0.055 Score=54.01 Aligned_cols=94 Identities=19% Similarity=0.191 Sum_probs=61.1
Q ss_pred hhHHhccccCcEEEccCC-CCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC-
Q 010594 350 AAAQNGMRRSIFCLNPAG-DTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI- 427 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~G-ds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I- 427 (506)
.+..+.|+.+.+++.|.. .......++|||.+|| |||.++.-.. .+.+.-....+.++..|..+ +.+.|..+
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~~--~e~i~~~~~g~~~~~~d~~~---l~~~i~~l~ 347 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAF--RRVLADGDAGRLVPVDDADG---MAAALIGIL 347 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHHH--HHHHTTTTSSEECCTTCHHH---HHHHHHHHH
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCcH--HHHhcCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 456788999999999953 3335778999999998 8888875211 12222223345565555433 44444333
Q ss_pred -CHHHHHHHHHHHhhhcceeEEc
Q 010594 428 -SPAQIREMRRNLVQYSRHFLYS 449 (506)
Q Consensus 428 -s~e~i~~Mr~~l~~v~~~f~Y~ 449 (506)
.++...+|.++..+....|-|.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 348 EDDQLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HCHHHHHHHHHHHHHHGGGGBHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCHH
Confidence 6788889998888877654443
No 5
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=92.66 E-value=0.21 Score=49.46 Aligned_cols=92 Identities=17% Similarity=0.160 Sum_probs=62.5
Q ss_pred hhHHhccccCcEEEccCCC-------CCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHH
Q 010594 350 AAAQNGMRRSIFCLNPAGD-------TPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLK 422 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gd-------s~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~ 422 (506)
.+..+.|+.+.+++.|.-. ......++|||.+|| |||.++.- ...+++.-. ..+.++..|..+ +.+
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~~~-~g~~~~~~d~~~---l~~ 336 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTSG--GAPETVTPA-TGLVVEGSDVDK---LSE 336 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSST--TGGGGCCTT-TEEECCTTCHHH---HHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCCC--ChHHHHhcC-CceEeCCCCHHH---HHH
Confidence 5677889999999999866 556788999999995 88888742 233444444 566676655433 443
Q ss_pred HHcCC--CHHHHHHHHHHHhhhcc-eeEE
Q 010594 423 FLRGI--SPAQIREMRRNLVQYSR-HFLY 448 (506)
Q Consensus 423 iL~~I--s~e~i~~Mr~~l~~v~~-~f~Y 448 (506)
.|..+ .++...+|.++..+... +|-|
T Consensus 337 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 365 (394)
T 3okp_A 337 LLIELLDDPIRRAAMGAAGRAHVEAEWSW 365 (394)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHTBH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 33332 78888999888777543 3433
No 6
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=91.97 E-value=0.44 Score=49.28 Aligned_cols=122 Identities=14% Similarity=0.104 Sum_probs=74.3
Q ss_pred CCCceEEEeecccccCCCChhHHHHHHHHhCCCCeEEEcCCCC-Cc-chhhHHhccccCcEEEccCC---CCCCCchHHH
Q 010594 303 SKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAG-EV-GKAAAQNGMRRSIFCLNPAG---DTPSSARLFD 377 (506)
Q Consensus 303 ~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~i~~~~~~-~~-~~~~~~~~m~~S~FCL~P~G---ds~ts~RlfD 377 (506)
..++-++.+.-+-+ ....|.++++++++.-.+.+...+.. .+ ......+.+++-+|.|+..- ....+-.||+
T Consensus 177 ~~K~k~v~wvvSnc---~~~~R~~~~~~L~k~i~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~ 253 (371)
T 2nzw_A 177 PLKRGFASFVASNP---NAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIID 253 (371)
T ss_dssp TTSSEEEEECCSCC---CCHHHHHHHHHHTTTSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHH
T ss_pred CCCceEEEEEEeCC---CcHHHHHHHHHHhCcCCEeeCCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHH
Confidence 34555555544322 23579999999987655544322111 01 11345677899999997653 4567899999
Q ss_pred HHHhCceeEEeeCCc---ccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCC--HHHHHHHH
Q 010594 378 AIVSGCIPVIVSDEL---ELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGIS--PAQIREMR 436 (506)
Q Consensus 378 Ai~aGCIPViisd~~---~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is--~e~i~~Mr 436 (506)
|+.+|||||+++..- .+|-... |.-.|...+..|.+.|+.+. ++.+.++-
T Consensus 254 al~~g~VPI~~G~~~~~~~~Pp~Sf---------I~~~dF~s~~~La~yL~~L~~n~~~Y~~y~ 308 (371)
T 2nzw_A 254 AYFSHTIPIYWGSPSVAKDFNPKSF---------VNVHDFKNFDEAIDYIKYLHTHKNAYLDML 308 (371)
T ss_dssp HHHTTCEEEEESCTTGGGTSCGGGS---------EEGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHhCCeEEEEECCCchhhhCCCCce---------EEcccCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 999999999999742 2343332 33334444445777776553 45555544
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=91.90 E-value=0.11 Score=52.14 Aligned_cols=93 Identities=13% Similarity=0.100 Sum_probs=62.7
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--C
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI--S 428 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s 428 (506)
+..+.|+.+.+++.|.-....+..++|||.+|| |||.++.- ...+++.-....+.++..|..+ +.+.|..+ .
T Consensus 277 ~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-PvI~~~~~--~~~e~v~~~~~g~~~~~~d~~~---la~~i~~l~~~ 350 (394)
T 2jjm_A 277 NVAELLAMSDLMLLLSEKESFGLVLLEAMACGV-PCIGTRVG--GIPEVIQHGDTGYLCEVGDTTG---VADQAIQLLKD 350 (394)
T ss_dssp CTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTC-CEEEECCT--TSTTTCCBTTTEEEECTTCHHH---HHHHHHHHHHC
T ss_pred hHHHHHHhCCEEEeccccCCCchHHHHHHhcCC-CEEEecCC--ChHHHhhcCCceEEeCCCCHHH---HHHHHHHHHcC
Confidence 456788899999998765556788999999995 78887742 2334454445566676655433 44433332 6
Q ss_pred HHHHHHHHHHHhhhc-ceeEEc
Q 010594 429 PAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
++...+|.++..+.. ..|-|.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~s~~ 372 (394)
T 2jjm_A 351 EELHRNMGERARESVYEQFRSE 372 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 788888988887765 665544
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=91.81 E-value=0.12 Score=51.03 Aligned_cols=92 Identities=17% Similarity=0.194 Sum_probs=61.3
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEc-CCCcCCcchHHHHHcCC--
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVS-SSDATQPGYLLKFLRGI-- 427 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~-e~dv~~~~~L~~iL~~I-- 427 (506)
+..+.|+.+.+++.|.-....+..++|||.+|+ |||.++.-. ..+.+.-....+.++ ..|..+ +.+.|..+
T Consensus 263 ~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~~--~~e~i~~~~~g~~~~~~~~~~~---l~~~i~~l~~ 336 (374)
T 2iw1_A 263 DVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVCG--YAHYIADANCGTVIAEPFSQEQ---LNEVLRKALT 336 (374)
T ss_dssp CHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTST--TTHHHHHHTCEEEECSSCCHHH---HHHHHHHHHH
T ss_pred cHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCCC--chhhhccCCceEEeCCCCCHHH---HHHHHHHHHc
Confidence 466788999999998765556788999999999 888887521 122222234456665 444332 33333332
Q ss_pred CHHHHHHHHHHHhhhcceeEE
Q 010594 428 SPAQIREMRRNLVQYSRHFLY 448 (506)
Q Consensus 428 s~e~i~~Mr~~l~~v~~~f~Y 448 (506)
.++...+|.++..+....+-|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~ 357 (374)
T 2iw1_A 337 QSPLRMAWAENARHYADTQDL 357 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHSCC
T ss_pred ChHHHHHHHHHHHHHHHHhhH
Confidence 688889999998887775433
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=90.40 E-value=0.22 Score=49.89 Aligned_cols=93 Identities=17% Similarity=0.207 Sum_probs=61.3
Q ss_pred hhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC-
Q 010594 349 KAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI- 427 (506)
Q Consensus 349 ~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I- 427 (506)
..+..+.|+.+..++.|.-.......++|||++|| |||.++.-.. .++++-. ..+.++..|... +.+.|..+
T Consensus 321 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~~~--~e~~~~~-~g~~~~~~d~~~---la~~i~~ll 393 (439)
T 3fro_A 321 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGL--RDIITNE-TGILVKAGDPGE---LANAILKAL 393 (439)
T ss_dssp HHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESSTHH--HHHCCTT-TCEEECTTCHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCCCc--ceeEEcC-ceEEeCCCCHHH---HHHHHHHHH
Confidence 34567889999999999877667889999999996 7888764211 1223212 455666655443 44443322
Q ss_pred --CHHHHHHHHHHHhhhcceeEE
Q 010594 428 --SPAQIREMRRNLVQYSRHFLY 448 (506)
Q Consensus 428 --s~e~i~~Mr~~l~~v~~~f~Y 448 (506)
.++...+|.++..+...+|-|
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~s~ 416 (439)
T 3fro_A 394 ELSRSDLSKFRENCKKRAMSFSW 416 (439)
T ss_dssp HHTTTTTHHHHHHHHHHHHTSCH
T ss_pred hcCHHHHHHHHHHHHHHHhhCcH
Confidence 467778888888777666433
No 10
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=90.01 E-value=0.065 Score=52.93 Aligned_cols=86 Identities=10% Similarity=0.041 Sum_probs=58.0
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCC------CCCCCCCcEEEEEcCCCcCCcchHHHHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPF------EGILDYRKIALFVSSSDATQPGYLLKFL 424 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPF------e~vlDw~~fSV~I~e~dv~~~~~L~~iL 424 (506)
+..+.|+.+..++.|.| ...+.|||.+|+ |||..+.--.|. ..+++-.. .+.++..|.. +..|.+.|
T Consensus 247 ~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~-~~~la~~i 319 (364)
T 1f0k_A 247 DMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLS-VDAVANTL 319 (364)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCC-HHHHHHHH
T ss_pred hHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCC-HHHHHHHH
Confidence 45677889999999987 567999999997 888886432232 12233333 6677765521 12377777
Q ss_pred cCCCHHHHHHHHHHHhhhc
Q 010594 425 RGISPAQIREMRRNLVQYS 443 (506)
Q Consensus 425 ~~Is~e~i~~Mr~~l~~v~ 443 (506)
..+.++...+|.++..+..
T Consensus 320 ~~l~~~~~~~~~~~~~~~~ 338 (364)
T 1f0k_A 320 AGWSRETLLTMAERARAAS 338 (364)
T ss_dssp HTCCHHHHHHHHHHHHHTC
T ss_pred HhcCHHHHHHHHHHHHHhh
Confidence 7777777888888876654
No 11
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=89.98 E-value=0.11 Score=46.58 Aligned_cols=41 Identities=27% Similarity=0.216 Sum_probs=32.9
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE 391 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~ 391 (506)
.+..+.|+.+.+++.|.-.......++|||.+|| |||.++.
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~ 129 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNE 129 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESS
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCC
Confidence 4577889999999997654445778999999998 8888774
No 12
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=85.44 E-value=0.69 Score=46.52 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=56.9
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCC--C
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGI--S 428 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~I--s 428 (506)
+..+.|+.+..++.|.-.......+.|||++|| |||.++.--.+ +++.-....+.++ |... +.+.|..+ .
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g~~--e~i~~~~~g~l~~--d~~~---la~~i~~ll~~ 379 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGGIK--FQIVDGETGFLVR--DANE---AVEVVLYLLKH 379 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHHHH--HHCCBTTTEEEES--SHHH---HHHHHHHHHHC
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCCCh--hheecCCCeEEEC--CHHH---HHHHHHHHHhC
Confidence 566788889988888755556778999999998 88888742111 2222233445555 3322 33333322 6
Q ss_pred HHHHHHHHHHHhhhc-ceeEEc
Q 010594 429 PAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 429 ~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
++...+|.++..+.. .+|-|.
T Consensus 380 ~~~~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 380 PEVSKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTBHH
T ss_pred HHHHHHHHHHHHHHHHHHcCHH
Confidence 788888888877654 355443
No 13
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=85.30 E-value=0.38 Score=50.03 Aligned_cols=117 Identities=16% Similarity=0.123 Sum_probs=69.2
Q ss_pred HHHHHHHHhC---CCCeEEEcCCCCCcchhhHHhccccC----cEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCC
Q 010594 324 RAKLVAELSS---AEGVVIEEGTAGEVGKAAAQNGMRRS----IFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPF 396 (506)
Q Consensus 324 R~~L~~~~~~---~~~~~i~~~~~~~~~~~~~~~~m~~S----~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPF 396 (506)
++.|.+..+. .+.+.+.... ...+..+.|+.+ ..++.|.-.......+.|||++|| |||.++.--.
T Consensus 321 ~~~l~~~~~~~~l~~~V~~~G~v----~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~g~-- 393 (499)
T 2r60_A 321 LGKIIELIDNNDCRGKVSMFPLN----SQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGGP-- 393 (499)
T ss_dssp HHHHHHHHHHTTCBTTEEEEECC----SHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSBHH--
T ss_pred HHHHHHHHHhcCCCceEEECCCC----CHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCCCH--
Confidence 5555554443 2345554321 234677888889 888888755445778999999998 8888874211
Q ss_pred CCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCCHHHHHHHHHHHhhhcce-eEEc
Q 010594 397 EGILDYRKIALFVSSSDATQPG-YLLKFLRGISPAQIREMRRNLVQYSRH-FLYS 449 (506)
Q Consensus 397 e~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~e~i~~Mr~~l~~v~~~-f~Y~ 449 (506)
.+++.-....+.++..|...-. .|.++|. .++...+|.++.++.... |-|.
T Consensus 394 ~e~v~~~~~g~l~~~~d~~~la~~i~~ll~--~~~~~~~~~~~a~~~~~~~fs~~ 446 (499)
T 2r60_A 394 AEILDGGKYGVLVDPEDPEDIARGLLKAFE--SEETWSAYQEKGKQRVEERYTWQ 446 (499)
T ss_dssp HHHTGGGTSSEEECTTCHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHSBHH
T ss_pred HHHhcCCceEEEeCCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 1222222334556655543311 1334444 677788888887765543 6555
No 14
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=84.20 E-value=0.22 Score=50.07 Aligned_cols=96 Identities=9% Similarity=0.003 Sum_probs=58.1
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcc-----cCCCC-CCCCCcE-------EE--EEcCCCc
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELE-----LPFEG-ILDYRKI-------AL--FVSSSDA 414 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~-----LPFe~-vlDw~~f-------SV--~I~e~dv 414 (506)
.+..+.|+.+..++.|.-.......+.|||++|| |||.++.-- -.-.. .++...+ .+ .++..|.
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~ 343 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDV 343 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCH
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCH
Confidence 4567789999999998876556788999999997 899887421 11110 0111111 22 3443343
Q ss_pred CCcchHHHHHcCC-CHHHHHHHHHHHhhhc-ceeEEc
Q 010594 415 TQPGYLLKFLRGI-SPAQIREMRRNLVQYS-RHFLYS 449 (506)
Q Consensus 415 ~~~~~L~~iL~~I-s~e~i~~Mr~~l~~v~-~~f~Y~ 449 (506)
.. +.+.|+-+ .++...+|.++..+.. .+|-|.
T Consensus 344 ~~---la~~i~l~~~~~~~~~~~~~a~~~~~~~fs~~ 377 (413)
T 3oy2_A 344 DD---LVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWD 377 (413)
T ss_dssp HH---HHHHHHHTTSHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HH---HHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHH
Confidence 33 43333112 5777788888887764 565444
No 15
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=83.77 E-value=0.42 Score=48.46 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=61.5
Q ss_pred hhhHHhccccCcEEEccC-CC------CCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHH
Q 010594 349 KAAAQNGMRRSIFCLNPA-GD------TPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLL 421 (506)
Q Consensus 349 ~~~~~~~m~~S~FCL~P~-Gd------s~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~ 421 (506)
+.+....|+++.|+|+.. |. ......++|+|++|+ |||+++.-.++ +++.-....+.++ ++. .+.
T Consensus 224 ~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-PVI~~~~~~~~--~~v~~~~~G~~~~--~~~---e~~ 295 (339)
T 3rhz_A 224 DEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-PVIVQEGIANQ--ELIENNGLGWIVK--DVE---EAI 295 (339)
T ss_dssp HHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-CEEEETTCTTT--HHHHHHTCEEEES--SHH---HHH
T ss_pred HHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-CEEEccChhHH--HHHHhCCeEEEeC--CHH---HHH
Confidence 345667787899999871 10 012357999999997 99998743222 2222234455554 232 377
Q ss_pred HHHcCCCHHHHHHHHHHHhhhcceeEE
Q 010594 422 KFLRGISPAQIREMRRNLVQYSRHFLY 448 (506)
Q Consensus 422 ~iL~~Is~e~i~~Mr~~l~~v~~~f~Y 448 (506)
+.|..++++++.+|+++.++..+.+..
T Consensus 296 ~~i~~l~~~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 296 MKVKNVNEDEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHTHHHHT
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhhc
Confidence 778889999999999999998776543
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=80.66 E-value=0.73 Score=47.57 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=53.4
Q ss_pred hhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCC
Q 010594 349 KAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGIS 428 (506)
Q Consensus 349 ~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is 428 (506)
..+..+.++.+..++.|.-....+.-+.|||++|| |||..+. - ..++++-..-.+.++..|... +-+.|..+-
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~-g--~~e~v~~~~~G~lv~~~d~~~---la~ai~~ll 377 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY-E--NKDLSNWHSNIVSLEQLNPEN---IAETLVELC 377 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB-T--TBCGGGTBTTEEEESSCSHHH---HHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC-C--cchhhhcCCCEEEeCCCCHHH---HHHHHHHHH
Confidence 35677889999999988643223567899999998 7777543 2 224444445566777766543 444333321
Q ss_pred -HHHHHHHHHHHhhhcceeEEccCC
Q 010594 429 -PAQIREMRRNLVQYSRHFLYSSPA 452 (506)
Q Consensus 429 -~e~i~~Mr~~l~~v~~~f~Y~~p~ 452 (506)
+.+..+ + +..+....|.|....
T Consensus 378 ~~~~~~~-~-~~~~~~~~~~W~~~~ 400 (413)
T 2x0d_A 378 MSFNNRD-V-DKKESSNMMFYINEF 400 (413)
T ss_dssp HHTC---------CCBSCGGGCCCC
T ss_pred cCHHHHH-H-hHHHHHHhCCHHHHH
Confidence 212211 1 333444567777543
No 17
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=78.69 E-value=0.88 Score=46.84 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=53.5
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCC---------cEEEEEcCCCcCCcchHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYR---------KIALFVSSSDATQPGYLL 421 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~---------~fSV~I~e~dv~~~~~L~ 421 (506)
...+.|+.+..++.|.-.......+.|||++|| |||.++.--+ .+++.-. ...+.++..|... +.
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~gg~--~e~v~~~~~~~~~~~~~~G~l~~~~d~~~---la 431 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGGL--ADTVIDANHAALASKAATGVQFSPVTLDG---LK 431 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHH--HHHCCBCCHHHHHTTCCCBEEESSCSHHH---HH
T ss_pred HHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCCCh--hheecccccccccccCCcceEeCCCCHHH---HH
Confidence 345788899999999876666788999999997 7777764211 1222222 3445666655433 43
Q ss_pred HHHcCC-----CHHHHHHHHHHHh
Q 010594 422 KFLRGI-----SPAQIREMRRNLV 440 (506)
Q Consensus 422 ~iL~~I-----s~e~i~~Mr~~l~ 440 (506)
+.|..+ .++...+|.++..
T Consensus 432 ~~i~~ll~~~~~~~~~~~~~~~~~ 455 (485)
T 1rzu_A 432 QAIRRTVRYYHDPKLWTQMQKLGM 455 (485)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 333321 5777888887764
No 18
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=78.58 E-value=0.84 Score=47.01 Aligned_cols=84 Identities=18% Similarity=0.161 Sum_probs=53.3
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCC---------cEEEEEcCCCcCCcchHH
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYR---------KIALFVSSSDATQPGYLL 421 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~---------~fSV~I~e~dv~~~~~L~ 421 (506)
...+.|+.+..++.|.-.......+.|||++|| |||.++.--+ .+++.-. ...+.++..|... +.
T Consensus 359 ~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~gg~--~e~v~~~~~~~~~~~~~~G~l~~~~d~~~---la 432 (485)
T 2qzs_A 359 FSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTGGL--ADTVSDCSLENLADGVASGFVFEDSNAWS---LL 432 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHH--HHHCCBCCHHHHHTTCCCBEEECSSSHHH---HH
T ss_pred HHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCCCc--cceeccCccccccccccceEEECCCCHHH---HH
Confidence 345788899999998866666788999999997 7777764211 1222222 3455666655433 43
Q ss_pred HHHcCC-----CHHHHHHHHHHHh
Q 010594 422 KFLRGI-----SPAQIREMRRNLV 440 (506)
Q Consensus 422 ~iL~~I-----s~e~i~~Mr~~l~ 440 (506)
+.|..+ .++...+|.++.+
T Consensus 433 ~~i~~ll~~~~~~~~~~~~~~~~~ 456 (485)
T 2qzs_A 433 RAIRRAFVLWSRPSLWRFVQRQAM 456 (485)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 333332 5777888887764
No 19
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=75.53 E-value=1.2 Score=43.91 Aligned_cols=101 Identities=15% Similarity=0.155 Sum_probs=57.7
Q ss_pred hHHHHHHHHhCCCCeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCC
Q 010594 323 IRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDY 402 (506)
Q Consensus 323 iR~~L~~~~~~~~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw 402 (506)
.++.+.+.....+.+.+... -+..+..+.|+.+..++.|.|. -+.|||++|+ |||..+... ...++++-
T Consensus 251 ~~~~l~~~~~~~~~v~~~g~----~~~~~~~~~~~~ad~~v~~Sg~-----~~lEA~a~G~-PvI~~~~~~-~~~e~v~~ 319 (384)
T 1vgv_A 251 VREPVNRILGHVKNVILIDP----QEYLPFVWLMNHAWLILTDSGG-----IQEEAPSLGK-PVLVMRDTT-ERPEAVTA 319 (384)
T ss_dssp HHHHHHHHHTTCTTEEEECC----CCHHHHHHHHHHCSEEEESSST-----GGGTGGGGTC-CEEEESSCC-SCHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEeCC----CCHHHHHHHHHhCcEEEECCcc-----hHHHHHHcCC-CEEEccCCC-CcchhhhC
Confidence 55655555444445655421 1224677888899988888732 1899999997 999987521 11122332
Q ss_pred CcEEEEEcCCCcCCcchHHHHHcCC--CHHHHHHHHHHH
Q 010594 403 RKIALFVSSSDATQPGYLLKFLRGI--SPAQIREMRRNL 439 (506)
Q Consensus 403 ~~fSV~I~e~dv~~~~~L~~iL~~I--s~e~i~~Mr~~l 439 (506)
. ..+.++. |... |.+.+..+ .++...+|.++.
T Consensus 320 g-~g~lv~~-d~~~---la~~i~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 320 G-TVRLVGT-DKQR---IVEEVTRLLKDENEYQAMSRAH 353 (384)
T ss_dssp T-SEEEECS-SHHH---HHHHHHHHHHCHHHHHHHHSSC
T ss_pred C-ceEEeCC-CHHH---HHHHHHHHHhChHHHhhhhhcc
Confidence 3 4566654 3322 43333332 566667776543
No 20
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=73.12 E-value=1.1 Score=44.12 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=55.0
Q ss_pred hHHHHHHHHhCCCCeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCC
Q 010594 323 IRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDY 402 (506)
Q Consensus 323 iR~~L~~~~~~~~~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw 402 (506)
+++.+.+.+...+.+.+... -+..+..+.|+.+.+++.|.| .-+.|||.+|+ |||..+..-- ..++++-
T Consensus 251 ~~~~~~~~~~~~~~v~~~g~----~~~~~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~~~~-~~e~v~~ 319 (375)
T 3beo_A 251 VRETANDILGDYGRIHLIEP----LDVIDFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRDTTE-RPEGIEA 319 (375)
T ss_dssp HHHHHHHHHTTCTTEEEECC----CCHHHHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSSCCS-CHHHHHT
T ss_pred HHHHHHHHhhccCCEEEeCC----CCHHHHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecCCCC-CceeecC
Confidence 45555444444455655421 123467788999999998863 23899999997 9998854211 1223333
Q ss_pred CcEEEEEcCCCcCCcchHHHHHcCC--CHHHHHHHHHH
Q 010594 403 RKIALFVSSSDATQPGYLLKFLRGI--SPAQIREMRRN 438 (506)
Q Consensus 403 ~~fSV~I~e~dv~~~~~L~~iL~~I--s~e~i~~Mr~~ 438 (506)
. ..+.++. |... |.+.|..+ .++...+|.++
T Consensus 320 g-~g~~v~~-d~~~---la~~i~~ll~~~~~~~~~~~~ 352 (375)
T 3beo_A 320 G-TLKLAGT-DEET---IFSLADELLSDKEAHDKMSKA 352 (375)
T ss_dssp T-SEEECCS-CHHH---HHHHHHHHHHCHHHHHHHCCC
T ss_pred C-ceEEcCC-CHHH---HHHHHHHHHhChHhHhhhhhc
Confidence 3 4555543 4322 43333322 45555555543
No 21
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=72.26 E-value=2 Score=48.72 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=58.2
Q ss_pred hHHhccc-cCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcC---
Q 010594 351 AAQNGMR-RSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRG--- 426 (506)
Q Consensus 351 ~~~~~m~-~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~--- 426 (506)
+....++ .+..++.|.=.......+.|||++|| |||.++.--. .+++.-..-.+.++..|... +.+.|..
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG~--~EiV~dg~~Gllv~p~D~e~---LA~aI~~lL~ 729 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGGP--AEIIVHGKSGFHIDPYHGDQ---AADTLADFFT 729 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBTH--HHHCCBTTTBEEECTTSHHH---HHHHHHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCCh--HHHHccCCcEEEeCCCCHHH---HHHHHHHHHH
Confidence 3445565 45566667655556788999999998 8888864211 12232334456677665433 3333321
Q ss_pred ---CCHHHHHHHHHHHhhhc-ceeEEcc
Q 010594 427 ---ISPAQIREMRRNLVQYS-RHFLYSS 450 (506)
Q Consensus 427 ---Is~e~i~~Mr~~l~~v~-~~f~Y~~ 450 (506)
-.++...+|.++.++.. .+|-|..
T Consensus 730 ~Ll~d~~~~~~m~~~ar~~a~~~fSwe~ 757 (816)
T 3s28_A 730 KCKEDPSHWDEISKGGLQRIEEKYTWQI 757 (816)
T ss_dssp HHHHCTHHHHHHHHHHHHHHHHSCCHHH
T ss_pred HhccCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 16778889988888765 7777764
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=64.87 E-value=9.1 Score=37.00 Aligned_cols=41 Identities=20% Similarity=0.227 Sum_probs=33.3
Q ss_pred hhHHhccccCcEEEccCC----------CCCCCchHHHHHHhCceeEEeeCC
Q 010594 350 AAAQNGMRRSIFCLNPAG----------DTPSSARLFDAIVSGCIPVIVSDE 391 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~G----------ds~ts~RlfDAi~aGCIPViisd~ 391 (506)
.+..+.|+.+..++.|.- .......+.|||++|| |||.++.
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~ 273 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGN 273 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCT
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCC
Confidence 456788999999999876 4456788999999997 8888874
No 23
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=59.81 E-value=19 Score=37.68 Aligned_cols=37 Identities=22% Similarity=0.333 Sum_probs=31.0
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEe
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIV 388 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPVii 388 (506)
.+..+.|+.+..++.|.-. .....+.|||.+|+ |||.
T Consensus 445 ~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-Pvv~ 481 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPY-NAHTTASDALWTGC-PVLT 481 (568)
T ss_dssp HHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-CEEB
T ss_pred HHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-CEEe
Confidence 3567889999999988766 45778999999996 9999
No 24
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=48.26 E-value=18 Score=31.34 Aligned_cols=134 Identities=16% Similarity=0.191 Sum_probs=65.0
Q ss_pred CCceEEEeecccccCCCChhHHHHHHHHhCCCC-eEEEcCCCC---Cc------chhhHHhcc--ccCcEEEccCCCCCC
Q 010594 304 KRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEG-VVIEEGTAG---EV------GKAAAQNGM--RRSIFCLNPAGDTPS 371 (506)
Q Consensus 304 ~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~-~~i~~~~~~---~~------~~~~~~~~m--~~S~FCL~P~Gds~t 371 (506)
+++.++.+.|+.........-..+++.+...+. +++..+... .. +.....+.| ..+...++..|.
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~--- 96 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGA--- 96 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTEEEEEECCCH---
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCcCEEEEcCCc---
Confidence 455566666665322222334456666655443 333332111 00 001123455 777777776664
Q ss_pred CchHHHHHHhCceeEEeeCCc-ccCC-CCCCCCCcEEEEEcCCCcCCcchHHHHHcCCCHHHHHHHHHHHhhhcce
Q 010594 372 SARLFDAIVSGCIPVIVSDEL-ELPF-EGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRH 445 (506)
Q Consensus 372 s~RlfDAi~aGCIPViisd~~-~LPF-e~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is~e~i~~Mr~~l~~v~~~ 445 (506)
..+.||+.+| +|+|+.+.. +.+. ...+......+.++..++. ...|.+.+..+-.+ .+||++..++...
T Consensus 97 -~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~-~~~l~~~i~~ll~~--~~~~~~a~~~~~~ 167 (170)
T 2o6l_A 97 -NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMS-STDLLNALKRVIND--PSYKENVMKLSRI 167 (170)
T ss_dssp -HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCC-HHHHHHHHHHHHHC--HHHHHHHHHHC--
T ss_pred -cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCC-HHHHHHHHHHHHcC--HHHHHHHHHHHHH
Confidence 4699999999 698887542 1111 1112334567777765432 22244444332111 1366666665543
No 25
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=47.22 E-value=14 Score=25.54 Aligned_cols=29 Identities=21% Similarity=0.309 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 010594 20 ILLFTLFLFAFSLLFALFSLTRNPYSDPYP 49 (506)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (506)
|+.-+..+|-+||.+| -.||..|.+||.-
T Consensus 6 i~Vy~vV~ffvsLFiF-GfLsnDP~RNP~r 34 (38)
T 3arc_I 6 ITVYIVVTFFVLLFVF-GFLSGDPARNPKR 34 (38)
T ss_dssp HHHHHHHHHHHHHHHH-HHHTTGGGCSSSC
T ss_pred eeehhHHHHHHHHHHc-cccCCCCCCCCCc
Confidence 3344444444444443 3467778887754
No 26
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=45.07 E-value=8.1 Score=43.17 Aligned_cols=102 Identities=12% Similarity=0.111 Sum_probs=64.8
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCC-----cccCCCCCCCCCcEEEEEcCCCcCCcc----hH
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDE-----LELPFEGILDYRKIALFVSSSDATQPG----YL 420 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~-----~~LPFe~vlDw~~fSV~I~e~dv~~~~----~L 420 (506)
..+.+.++.+...+.|.=..+...-..|||++|+ |||.++. +.......-+=....+.|+..+...+. .|
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaL 588 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQL 588 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHH
Confidence 3577889999999999877778899999999997 6666663 222210000000123445332221111 14
Q ss_pred HHHHc---CCCHHHHHHHHHHHhhhcceeEEccCC
Q 010594 421 LKFLR---GISPAQIREMRRNLVQYSRHFLYSSPA 452 (506)
Q Consensus 421 ~~iL~---~Is~e~i~~Mr~~l~~v~~~f~Y~~p~ 452 (506)
.+.|. .-++++..+|+++..++...|.|....
T Consensus 589 a~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA 623 (725)
T 3nb0_A 589 VDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMG 623 (725)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 44443 347888899999999999999998654
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=32.78 E-value=37 Score=33.80 Aligned_cols=83 Identities=14% Similarity=0.213 Sum_probs=53.5
Q ss_pred HHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCC--C-------CCCCCcEEEEEcCCCcCCcchHHH
Q 010594 352 AQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFE--G-------ILDYRKIALFVSSSDATQPGYLLK 422 (506)
Q Consensus 352 ~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe--~-------vlDw~~fSV~I~e~dv~~~~~L~~ 422 (506)
..+.|+.+..+++-.|. ..+.|++.+|. |+|+-+ +|+. + .+--...++.|+++++. +..|.+
T Consensus 246 m~~~l~~aDlvI~raG~----~Tv~E~~a~G~-P~Ilip---~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~-~~~L~~ 316 (365)
T 3s2u_A 246 MAAAYAWADLVICRAGA----LTVSELTAAGL-PAFLVP---LPHAIDDHQTRNAEFLVRSGAGRLLPQKSTG-AAELAA 316 (365)
T ss_dssp HHHHHHHCSEEEECCCH----HHHHHHHHHTC-CEEECC--------CCHHHHHHHHHHTTTSEEECCTTTCC-HHHHHH
T ss_pred hhhhhccceEEEecCCc----chHHHHHHhCC-CeEEec---cCCCCCcHHHHHHHHHHHCCCEEEeecCCCC-HHHHHH
Confidence 34678899999987773 35899999997 888743 2221 0 12234568889887753 222443
Q ss_pred HHcCC--CHHHHHHHHHHHhhhc
Q 010594 423 FLRGI--SPAQIREMRRNLVQYS 443 (506)
Q Consensus 423 iL~~I--s~e~i~~Mr~~l~~v~ 443 (506)
.|..+ .++.+++|.++.+++.
T Consensus 317 ~i~~ll~d~~~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 317 QLSEVLMHPETLRSMADQARSLA 339 (365)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHTC
T ss_pred HHHHHHCCHHHHHHHHHHHHhcC
Confidence 33332 5788999999987763
No 28
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=32.67 E-value=40 Score=35.42 Aligned_cols=91 Identities=14% Similarity=-0.012 Sum_probs=55.2
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHHHhCc----eeEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHH
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGC----IPVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFL 424 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGC----IPViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL 424 (506)
.+....++.+.-|+.|.=......-..|||++|+ -|||+++.--.+ +.++ . ++.|+..|...-. .|.++|
T Consensus 343 ~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~--~~l~-~--g~lv~p~d~~~lA~ai~~lL 417 (482)
T 1uqt_A 343 KLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA--NELT-S--ALIVNPYDRDEVAAALDRAL 417 (482)
T ss_dssp HHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG--GTCT-T--SEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCH--HHhC-C--eEEECCCCHHHHHHHHHHHH
Confidence 4556677778877776543334678999999998 688998742211 1122 2 4567766654311 144444
Q ss_pred cCCCHHHHHHHHHHHhhhccee
Q 010594 425 RGISPAQIREMRRNLVQYSRHF 446 (506)
Q Consensus 425 ~~Is~e~i~~Mr~~l~~v~~~f 446 (506)
. .++++.++|.+++.+....+
T Consensus 418 ~-~~~~~r~~~~~~~~~~v~~~ 438 (482)
T 1uqt_A 418 T-MSLAERISRHAEMLDVIVKN 438 (482)
T ss_dssp T-CCHHHHHHHHHHHHHHHHHT
T ss_pred c-CCHHHHHHHHHHHHHHHHhC
Confidence 3 36677777777776655443
No 29
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=28.33 E-value=41 Score=33.92 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=33.8
Q ss_pred hhHHhccccCcEEEccCCCCCCCchHHHHH-------HhCceeEEeeCC
Q 010594 350 AAAQNGMRRSIFCLNPAGDTPSSARLFDAI-------VSGCIPVIVSDE 391 (506)
Q Consensus 350 ~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi-------~aGCIPViisd~ 391 (506)
.+..+.|+.+..++.|.-.......+.||| ++|+ |||.++.
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~-PVIas~~ 323 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL-PAVCPNA 323 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC-CEEEEGG
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC-cEEEehh
Confidence 456788999999999876655677899999 9995 9999876
No 30
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.22 E-value=46 Score=28.36 Aligned_cols=35 Identities=14% Similarity=-0.009 Sum_probs=24.6
Q ss_pred hhceecCCCccCCCCCCeEEEecCCchhhHHHHHh
Q 010594 101 ERQRVYEDSYYPLSLPIRVYVYEMPRKFTYDLLWL 135 (506)
Q Consensus 101 ~~~~~~~~~~~p~~~~~~IYVYdLPp~FN~~lL~~ 135 (506)
++.+..++.....++...|||-+||+..+.+-|+.
T Consensus 16 ~~~~~~~~~~~~~~ps~~LfVgNLp~~vte~dL~~ 50 (119)
T 2ad9_A 16 PRGSHMGDSRSAGVPSRVIHIRKLPIDVTEGEVIS 50 (119)
T ss_dssp ------CCTTSCSSCCSEEEEESCCTTCCHHHHHH
T ss_pred CcccccccccccCCCCCEEEEeCCCCCCCHHHHHH
Confidence 55667777777778889999999999999877754
No 31
>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B
Probab=25.74 E-value=88 Score=31.00 Aligned_cols=16 Identities=13% Similarity=0.289 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhcCC
Q 010594 26 FLFAFSLLFALFSLTR 41 (506)
Q Consensus 26 ~~~~~~~~~~~~~~~~ 41 (506)
.||++.+-++|.+|++
T Consensus 53 glFa~~m~v~l~Tld~ 68 (290)
T 3ixz_B 53 GIFALCIYVLMRTIDP 68 (290)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 4667777777777776
No 32
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=25.20 E-value=2.1e+02 Score=30.17 Aligned_cols=39 Identities=13% Similarity=0.004 Sum_probs=30.4
Q ss_pred hHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeC
Q 010594 351 AAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSD 390 (506)
Q Consensus 351 ~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd 390 (506)
.....++.+.+.+.|.=..+...-+.|||.+||.+| .++
T Consensus 394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI-~s~ 432 (536)
T 3vue_A 394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCA-CAS 432 (536)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEE-ECS
T ss_pred HHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEE-EcC
Confidence 345678889999999777677889999999998555 554
No 33
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=24.90 E-value=97 Score=27.98 Aligned_cols=59 Identities=20% Similarity=0.259 Sum_probs=32.9
Q ss_pred HHHHHHhCcee--EEeeCCc---ccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCCHHHHHHHHHHHhhh
Q 010594 375 LFDAIVSGCIP--VIVSDEL---ELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQY 442 (506)
Q Consensus 375 lfDAi~aGCIP--Viisd~~---~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is~e~i~~Mr~~l~~v 442 (506)
+|-.|..|-|| ||..++. .+|+.... .-..+.||.+.+.+ |..++++++.+|-+.+.++
T Consensus 39 iFC~Ii~~e~p~~iV~e~e~~~afld~~P~~--pgH~LVIPkrHv~~-------l~dL~~ee~~~L~~~~~~v 102 (173)
T 3l7x_A 39 LFCKIVAGDIPSSKVYEDEDVLAFLDISQAT--KGHTLVIPKEHVRN-------ALEMTQTQAANLFARIPKI 102 (173)
T ss_dssp HHHHHHHTSSCCCEEEECSSEEEEECTTCSS--TTCEEEEESSCCSC-------GGGCCHHHHHHHHHTHHHH
T ss_pred cccccccCCCCceEEEECCCEEEEEcCCCCC--CcEEEEEeccccCC-------hhhCCHHHHHHHHHHHHHH
Confidence 44444444444 5666653 34554432 33467788877765 4556777776665544443
No 34
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.42 E-value=67 Score=24.33 Aligned_cols=24 Identities=17% Similarity=-0.051 Sum_probs=19.9
Q ss_pred CCCCCCeEEEecCCchhhHHHHHh
Q 010594 112 PLSLPIRVYVYEMPRKFTYDLLWL 135 (506)
Q Consensus 112 p~~~~~~IYVYdLPp~FN~~lL~~ 135 (506)
|..++.+|||-+||+..+.+-|+.
T Consensus 1 ~~~~~~~l~v~nlp~~~t~~~l~~ 24 (85)
T 1x4e_A 1 GSSGSSGLYIRGLQPGTTDQDLVK 24 (85)
T ss_dssp CCCCCCEEEEESCCTTCCHHHHHT
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHH
Confidence 356788999999999999987753
No 35
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=20.89 E-value=68 Score=24.64 Aligned_cols=25 Identities=24% Similarity=0.331 Sum_probs=20.9
Q ss_pred cCCCCCCeEEEecCCchhhHHHHHh
Q 010594 111 YPLSLPIRVYVYEMPRKFTYDLLWL 135 (506)
Q Consensus 111 ~p~~~~~~IYVYdLPp~FN~~lL~~ 135 (506)
.+...+.+|||-+||...+.+-|+.
T Consensus 3 ~~~~~~~~l~V~nlp~~~t~~~l~~ 27 (92)
T 2dgv_A 3 SGSSGACQIFVRNLPFDFTWKMLKD 27 (92)
T ss_dssp CSSSSCCEEEECSCCTTCCHHHHHH
T ss_pred CCCCCCcEEEEeCCCCCCCHHHHHH
Confidence 4567889999999999999877754
Done!